BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044047
         (260 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 144/260 (55%), Positives = 177/260 (68%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA+ LL LMIQRG  P+ F Y+TLIDGFCL G ID AR+LFVSM+  G   + V+YN 
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK+  + E+  LY EM+ K I PTV+TYNTL  GLF   +V  A  LF EM+  D
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  E+ TYN  +DGLCKN ++ EA ELF  L     +  I+ ++CLIDGLCK  K+E A 
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  L   GL PNV+TY +MIHG C  GQ++ A DLFL ME KG APN VTFNTLM G 
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF 563

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N+E  KVVELL  M E++
Sbjct: 564 CQNDEMQKVVELLQEMAEKD 583



 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 140/245 (57%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++PN   Y T+ID  C  G ID+ +ELF+ M   G   +VV Y+++I+G C T   E + 
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L++EM+ +G+ P VVT+N L   L +  ++E A  L   M     + +T TYNT IDG 
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C  G I +A +LF ++     E    +Y+ LI+G CK G++  A +L++ +    +MP V
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           +TYN ++ G   +G++  A +LF +M+   + P   T+N L+ G  +NN  S+ +EL H 
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473

Query: 256 MDERN 260
           ++  +
Sbjct: 474 LENHD 478



 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 133/257 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+   L   M  RG+ P+   YS++I G C TG  + A+ LF  M   G   NVVT+N 
Sbjct: 254 IDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNV 313

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   +EE+ +L   M+ +G  P   TYNTL  G     +++ A  LF  M+   
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +YN  I+G CK+G +VEA +L+R +   +    +  Y+ L+ GL + GK+  AW
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +    L P   TYNI++ G C +  + +A +LF  +E     P+   FN L+ G 
Sbjct: 434 NLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGL 493

Query: 241 IRNNETSKVVELLHRMD 257
            +  +     EL +R+ 
Sbjct: 494 CKARKIEIARELFNRLS 510



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 6/256 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M++RG  PN   +++L+ G CL   I  A  L   M   G   NVVTY TL+NG C
Sbjct: 149 VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLC 208

Query: 67  KTKDVEESLNLYSEMLSKG------IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            T +   ++ L+ EML+        I+P +V Y T+   L +   ++   +LF EM+   
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   Y++ I G+C  G    A  LF  +        +  ++ LID LCK GK+E A 
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + + + G  P+  TYN +I GFC +G++D A DLF+ ME+KG+  + V++N L+ G 
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388

Query: 241 IRNNETSKVVELLHRM 256
            ++    +  +L   M
Sbjct: 389 CKSGRMVEAKKLYREM 404



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 120/231 (51%), Gaps = 6/231 (2%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P+    + LI+ +C   ++D    +   M   G   N VT+ +L+ G C    + E+
Sbjct: 122 GLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEA 181

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD------VAAETSTY 128
             L  +M+  G RP VVTY TL +GL        A+KL +EM + +      +      Y
Sbjct: 182 TGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCY 241

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            T ID LCK+G I +  ELF  ++       + AYS +I G+C  G+ E A  LF  +  
Sbjct: 242 CTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVD 301

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            G+ PNVVT+N++I   C  G+M++A+ L   M  +G +P+  T+NTL+ G
Sbjct: 302 EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG 352



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 108/225 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA +L   M+ + + P    Y+TL+ G    G++  A  LF  M ++       TYN 
Sbjct: 394 MVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNI 453

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   + E++ L+  + +   +P++  +N L  GL +  ++E A +LF+ + H  
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG 513

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I GLCK+G +  A +LF  +    C   +  ++ L+ G C+  +++   
Sbjct: 514 LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVV 573

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           EL Q +      P+  T +I++     D +  +   L     A+G
Sbjct: 574 ELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 10/218 (4%)

Query: 31  CLTGEIDRARELFVS---MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
           C +G I R+    V    +D+      + ++NTL+    K K   + ++LY  M   G+ 
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQP-TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLA 124

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P  +T N L +    +++V+  L +  EM     +  T T+ + + GLC    I EA  L
Sbjct: 125 PDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGL 184

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR------VGLMPNVVTYNIM 201
            R +  +     +  Y  L++GLC  G    A +L + +        V + PN+V Y  +
Sbjct: 185 LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTI 244

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           I   C DG +DK  +LFL+M+ +G++P+ V +++++ G
Sbjct: 245 IDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 122 AAETSTYNTFIDGLCKNGYI--VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           A +      F+   CK+G+I   EA  +F  L  ++    I +++ L+  + KI +    
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L++ +  +GL P+ +T NI+I+ +CN  ++D    +  +M  +G +PN VTF +L+ G
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171

Query: 240 CIRNNETSKVVELLHRM 256
               +  S+   LL +M
Sbjct: 172 LCLGSRISEATGLLRKM 188



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 63/148 (42%)

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A  +F+ +         S++NT +  + K     +   L++ + ++         + LI+
Sbjct: 76  AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILIN 135

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
             C + K++    +   + R G  PN VT+  ++ G C   ++ +A  L   M   G  P
Sbjct: 136 CYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRP 195

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N VT+ TL+ G      T   V+L   M
Sbjct: 196 NVVTYGTLLNGLCMTGNTMLAVKLHEEM 223


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 136/258 (52%), Positives = 180/258 (69%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +LL++MIQRG+ PN   Y++LIDGFC+ G+++ ARELF+SM   G   + ++Y TLI
Sbjct: 325 EAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLI 384

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCKT  V+E++NLY+EML  G  P V TY TL  GLF+  +V  A KLF  M+   V+
Sbjct: 385 NGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVS 444

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A +  Y  F+DGLCKN  + EA ELF  L+    +L IE YSCLIDGLCK GKLETAWEL
Sbjct: 445 ANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWEL 504

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L + GL P+VVTYNIMIHGFC  GQ+D A+ LF  ME  G  P+ + +NTL+ G   
Sbjct: 505 FEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCE 564

Query: 243 NNETSKVVELLHRMDERN 260
            N+  +V++LLH+M +++
Sbjct: 565 GNKLEEVIKLLHKMVQKD 582



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 148/262 (56%), Gaps = 6/262 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA   +  +++RG  PN   Y+TLI G C+   I  A  LF+ M   GC  N VTY T
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG------IRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           LI G C+T +V  +L L+ EML+         +P V+TY+ +  GL ++ + + A +LF+
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM+   +  +  +Y+T I G C  G   ++  LF  +     +  +  +S LID LCK G
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           K+  A +L + + + G++PN++TYN +I GFC  G ++ A +LFL M +KG+ P+ +++ 
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
           TL+ G  +  +  + + L + M
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEM 403



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 134/250 (53%), Gaps = 2/250 (0%)

Query: 13  QRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           Q GV  +P    YS +IDG C  G  D A+ELF  M   G + +V++Y+TLI+G+C    
Sbjct: 228 QYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGK 287

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            ++S +L+ EM+ +G++P +VT++ L   L +  +V  A KL + M    +     TYN+
Sbjct: 288 WDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNS 347

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG C  G +  A ELF ++     E    +Y+ LI+G CK  K++ A  L+  + +VG
Sbjct: 348 LIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVG 407

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             PNV TY  ++ G    G++  A  LF  M+  GV+ N   +   + G  +N+   + +
Sbjct: 408 KSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAM 467

Query: 251 ELLHRMDERN 260
           EL + +   N
Sbjct: 468 ELFNELKSYN 477



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 138/263 (52%), Gaps = 6/263 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    DLM++    P    ++ L+ G        +   L+  M + G   ++ T + L 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C    V E+L   + +L +G  P VVTY TL  GL   H++  A +LF  MQ     
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIGKL 176
               TY T I GLC+ G +  A +L + +        + C+ G+  YS +IDGLCK+G+ 
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A ELF+ +   G++P+V++Y+ +IHGFC  G+ D++  LF +M  +GV P+ VTF+ L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           +    +  + ++  +LL  M +R
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQR 336


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 134/258 (51%), Positives = 181/258 (70%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +LL +MI+ G+ P+   Y++LI+GFC+ G+++ ARELFVSM   GC  +V++YN LI
Sbjct: 303 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 362

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGY KT  VEE++ LY+EML  G RP V+TY++L  G+F   +V+ A KLF  M+   +A
Sbjct: 363 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 422

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + TY  F+DGLCKN  + EA +LF  L+    +L IE  +CLIDGLCK GKLETAWEL
Sbjct: 423 ENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWEL 482

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L   G  PNVVTY IMIHGFC +GQ+DKA+ L   MEA G  P+ +T+NTLM G   
Sbjct: 483 FEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYE 542

Query: 243 NNETSKVVELLHRMDERN 260
           +N+  +VV+LLHRM +++
Sbjct: 543 SNKLEEVVQLLHRMAQKD 560



 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 142/245 (57%), Gaps = 6/245 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DIN----GCMHN 54
           + EA+RL   M + G  P+   Y TLI G C TG I+ A +L   M  DI+     C  N
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           V+TYN +++G CK    +E+  L+ EM ++G+ P++++YN+L HG     + E + +L D
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLD 274

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM    +  +  T+N  ID LCK G ++EA +L   +        +  Y+ LI+G C +G
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 334

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            L +A ELF S+P  G  P+V++YN++I+G+    ++++A  L+ +M   G  PN +T++
Sbjct: 335 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 394

Query: 235 TLMLG 239
           +L+ G
Sbjct: 395 SLLKG 399



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 136/244 (55%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +PN   Y+ ++DG C  G  D A++LF  M   G + ++++YN+LI+G+C     EES  
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L  EML +G++P +VT+N L   L +  +V  A KL   M  S +  +  TYN+ I+G C
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
             G +  A ELF ++    CE  + +Y+ LI+G  K  K+E A +L+  +  VG  PNV+
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 391

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY+ ++ G    G++D A  LF  M+A G+A N  T+   + G  +N+   + ++L   +
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 451

Query: 257 DERN 260
              N
Sbjct: 452 KSSN 455



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 134/261 (51%), Gaps = 6/261 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A     LM++    P+   ++ L+ G        +   L+  M ++G   +  T N L+N
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    + E    ++ +L +G  P +VTYNTL  GL   H++  A +LF  MQ      
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIGKLE 177
           +  TY T I GLC  G I  A +L + +        + C+  +  Y+ ++DGLCK+G+ +
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF+ +   G++P++++YN +IHGFC  G+ +++  L  +M  +G+ P+ VTFN L+
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292

Query: 238 LGCIRNNETSKVVELLHRMDE 258
               +  +  +  +LL  M E
Sbjct: 293 DTLCKEGKVIEAKKLLGVMIE 313



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           LIDG C  G+++ A ELF  +   G   NVVTY  +I+G+C+   V+++  L  +M + G
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P ++TYNTL  G +E +++E  ++L   M   DV+ +  T +  +D L K+    E  
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 585

Query: 146 ELFRTLRVLK 155
            L     + K
Sbjct: 586 HLLPRFPIQK 595


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 134/258 (51%), Positives = 181/258 (70%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +LL +MI+ G+ P+   Y++LI+GFC+ G+++ ARELFVSM   GC  +V++YN LI
Sbjct: 278 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 337

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGY KT  VEE++ LY+EML  G RP V+TY++L  G+F   +V+ A KLF  M+   +A
Sbjct: 338 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 397

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + TY  F+DGLCKN  + EA +LF  L+    +L IE  +CLIDGLCK GKLETAWEL
Sbjct: 398 ENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWEL 457

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L   G  PNVVTY IMIHGFC +GQ+DKA+ L   MEA G  P+ +T+NTLM G   
Sbjct: 458 FEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYE 517

Query: 243 NNETSKVVELLHRMDERN 260
           +N+  +VV+LLHRM +++
Sbjct: 518 SNKLEEVVQLLHRMAQKD 535



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 146/276 (52%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DIN----GCMHN 54
           + EA+RL   M + G  P+   Y TLI G C TG I+ A +L   M  DI+     C  N
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214

Query: 55  VVTYNTLINGYCKTKDVEESLNLY----------SEMLSKGIRPTVVTYNTLFHGLFEIH 104
           V+TYN +++G CK    +E+  L+          +EML +G++P +VT+N L   L +  
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +V  A KL   M  S +  +  TYN+ I+G C  G +  A ELF ++    CE  + +Y+
Sbjct: 275 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 334

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LI+G  K  K+E A +L+  +  VG  PNV+TY+ ++ G    G++D A  LF  M+A 
Sbjct: 335 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 394

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G+A N  T+   + G  +N+   + ++L   +   N
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 430



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 16/272 (5%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A     LM++    P+   ++ L+ G        +   L+  M ++G   +  T N L+N
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    + E    ++ +L +G  P +VTYNTL  GL   H++  A +LF  MQ      
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIGKLE 177
           +  TY T I GLC  G I  A +L + +        + C+  +  Y+ ++DGLCK+G+ +
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 178 TAWELFQSLPRVGLMPN----------VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            A +LF+ +   G++PN          +VT+N++I   C +G++ +A  L   M   G+ 
Sbjct: 233 EAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV 292

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           P+ VT+N+L+ G     + +   EL   M  +
Sbjct: 293 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 324



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           LIDG C  G+++ A ELF  +   G   NVVTY  +I+G+C+   V+++  L  +M + G
Sbjct: 441 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P ++TYNTL  G +E +++E  ++L   M   DV+ +  T +  +D L K+    E  
Sbjct: 501 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 560

Query: 146 ELFRTLRVLK 155
            L     + K
Sbjct: 561 HLLPRFPIQK 570


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 135/258 (52%), Positives = 174/258 (67%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL++MIQRG+ PN   Y++LI+GFCL G+++ ARELFVSM   GC  +V+ Y  LI
Sbjct: 322 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLI 381

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCKT  VEE++ LY+ ML  G RP V TY  L  GLF+  +V  A KLF  M+   + 
Sbjct: 382 NGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIP 441

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   Y  F++GLCKNG + EA ELF  L+    +L IE ++CLIDGLCK GKLETAWEL
Sbjct: 442 GDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL 501

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ LP+  L P+VVTYNIMIH FC  GQ+ KA+ LF  ME  G  P+ +T+ TL+ G   
Sbjct: 502 FEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFE 561

Query: 243 NNETSKVVELLHRMDERN 260
           + +  KVVELLH M +R+
Sbjct: 562 SKKLEKVVELLHMMVQRD 579



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 136/262 (51%), Gaps = 14/262 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHN------ 54
           + +A+ L   M + G  PNA  Y TL+ G C TG I  A +L   M  +  ++       
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           V++Y+ +I+  CK +  +E+ +L+ EM  +G+ PTV++Y +L          E A +LF+
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFN 293

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM +  V     T+N  ID LCK G ++EA +L   +        +  Y+ LI+G C +G
Sbjct: 294 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 353

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            L +A ELF S+P  G  P+V+ Y ++I+G+C   ++++A  L+  M   G  P+  T+ 
Sbjct: 354 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG 413

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
            L+ G  +  +     +L   M
Sbjct: 414 ALLTGLFQGGKVGDAKKLFGVM 435



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 8/244 (3%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P    YS +ID  C     D AR+LF  M + G    V++Y +L+         EE+  
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKR 290

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L++EM+++G++P VVT+N L   L +  +V  A  L + M    +     TYN+ I+G C
Sbjct: 291 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 350

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
             G +  A ELF ++    CE  +  Y+ LI+G CK  K+E A +L+  + +VG  P+V 
Sbjct: 351 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  ++ G    G++  A  LF  M+  G+  +   +   + G  +N    + +EL +++
Sbjct: 411 TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKL 470

Query: 257 DERN 260
              N
Sbjct: 471 KSYN 474



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 125/290 (43%), Gaps = 33/290 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +   LM+     P    ++ L+ G        +   L+  M ++G   +  T N L+
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C    V E L + + +L +G  P +VTY TL  GL   H++  A  LF  MQ     
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE------AYSCLIDGLCK---- 172
               TY T + GLC+ G I  A +L + +       GI       +YS +ID LCK    
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 173 -------------------IGKLETAWE----LFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
                              I      WE    LF  +   G+ PNVVT+N++I   C +G
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG 318

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++ +A DL   M  +G+ PN +T+N+L+ G     + +   EL   M  +
Sbjct: 319 KVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 368



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 65/124 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + +    ++ +   ++ LIDG C  G+++ A ELF  +       +VVTYN +I
Sbjct: 462 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 521

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +C+   V ++  L+ +M   G  P  +TY TL  G FE  ++E  ++L   M   DV+
Sbjct: 522 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581

Query: 123 AETS 126
            + +
Sbjct: 582 LDVN 585



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 2/125 (1%)

Query: 136 CKNGYI--VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           CK G I  ++A + F  +        + +++ L+ GL KI      + L+  +   G+ P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +  T NI+++  CN  ++ +   +   +  +G  P+ VT+ TL+ G    +  SK   L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 254 HRMDE 258
            RM +
Sbjct: 190 TRMQK 194


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 135/258 (52%), Positives = 174/258 (67%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL++MIQRG+ PN   Y++LI+GFCL G+++ ARELFVSM   GC  +V+ Y  LI
Sbjct: 330 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLI 389

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCKT  VEE++ LY+ ML  G RP V TY  L  GLF+  +V  A KLF  M+   + 
Sbjct: 390 NGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIP 449

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   Y  F++GLCKNG + EA ELF  L+    +L IE ++CLIDGLCK GKLETAWEL
Sbjct: 450 GDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL 509

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ LP+  L P+VVTYNIMIH FC  GQ+ KA+ LF  ME  G  P+ +T+ TL+ G   
Sbjct: 510 FEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFE 569

Query: 243 NNETSKVVELLHRMDERN 260
           + +  KVVELLH M +R+
Sbjct: 570 SKKLEKVVELLHMMVQRD 587



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 139/262 (53%), Gaps = 6/262 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHN------ 54
           + +A+ L   M + G  PNA  Y TL+ G C TG I  A +L   M  +  ++       
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           V++Y+ +I+  CK +  +E+ +L+ EM  +G+ PTV++Y +L HG     + E A +LF+
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM +  V     T+N  ID LCK G ++EA +L   +        +  Y+ LI+G C +G
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 361

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            L +A ELF S+P  G  P+V+ Y ++I+G+C   ++++A  L+  M   G  P+  T+ 
Sbjct: 362 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG 421

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
            L+ G  +  +     +L   M
Sbjct: 422 ALLTGLFQGGKVGDAKKLFGVM 443



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 138/252 (54%), Gaps = 6/252 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++RG  P+   Y+TLI G C+   I +A  LF  M   GC  N +TY TL+ G C+T +
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGN 216

Query: 71  VEESLNLYSEMLSKG------IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +  +L L+ EML+         +P V++Y+ +   L +  + + A  LF+EM+   +   
Sbjct: 217 ISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPT 276

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             +Y + I G C  G   EA  LF  +     +  +  ++ LID LCK GK+  A +L +
Sbjct: 277 VISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLE 336

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            + + G++PN++TYN +I GFC  G ++ A +LF+ M +KG  P+ + +  L+ G  + +
Sbjct: 337 VMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTS 396

Query: 245 ETSKVVELLHRM 256
           +  + ++L + M
Sbjct: 397 KVEEAMKLYNGM 408



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 128/244 (52%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P    YS +ID  C     D AR+LF  M + G    V++Y +LI+G+C     EE+  
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKR 298

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L++EM+++G++P VVT+N L   L +  +V  A  L + M    +     TYN+ I+G C
Sbjct: 299 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 358

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
             G +  A ELF ++    CE  +  Y+ LI+G CK  K+E A +L+  + +VG  P+V 
Sbjct: 359 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 418

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  ++ G    G++  A  LF  M+  G+  +   +   + G  +N    + +EL +++
Sbjct: 419 TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKL 478

Query: 257 DERN 260
              N
Sbjct: 479 KSYN 482



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 6/263 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +   LM+     P    ++ L+ G        +   L+  M ++G   +  T N L+
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C    V E L + + +L +G  P +VTY TL  GL   H++  A  LF  MQ     
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE------AYSCLIDGLCKIGKL 176
               TY T + GLC+ G I  A +L + +       GI       +YS +ID LCK  + 
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A +LF+ +   G+ P V++Y  +IHGFC  G+ ++A  LF +M  +GV PN VTFN L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           +    +  +  +  +LL  M +R
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQR 341



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 65/124 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + +    ++ +   ++ LIDG C  G+++ A ELF  +       +VVTYN +I
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +C+   V ++  L+ +M   G  P  +TY TL  G FE  ++E  ++L   M   DV+
Sbjct: 530 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589

Query: 123 AETS 126
            + +
Sbjct: 590 LDVN 593


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  258 bits (659), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 131/260 (50%), Positives = 174/260 (66%), Gaps = 3/260 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +LL++ IQRG+  +   Y++LIDGFC  G++  AR+LF+SM   GC HN ++Y  LI
Sbjct: 150 EAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILI 209

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   VEE++NLY+EM   G RP V TY+TL  GL +  +V  A KLF  M+ S ++
Sbjct: 210 NGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGIS 269

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            ++  Y  F+DGLCKNG + EA ELF  L+    +L  E+YS LIDGLCK GK+E AWE 
Sbjct: 270 VDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEF 329

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA---KGVAPNCVTFNTLMLG 239
           F+ L + GL PNVVT NIMIHGFC   Q+DKA+ LF  ME     G  P+ +T+NTL+ G
Sbjct: 330 FKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRG 389

Query: 240 CIRNNETSKVVELLHRMDER 259
              +N+  +VV LLH+M +R
Sbjct: 390 FCESNKLEEVVNLLHKMFKR 409



 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 143/267 (53%), Gaps = 17/267 (6%)

Query: 11  MIQRGVRPNAFVYSTLI-----------------DGFCLTGEIDRARELFVSMDINGCMH 53
           +++RG  P+   Y+TLI                 DG C  G  D A+E+F  M   G + 
Sbjct: 36  ILRRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIP 95

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           NV++Y++L++G+C    +EES  L++EM+ +G++P +V +N L   L +  +V  A KL 
Sbjct: 96  NVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLL 155

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +      +  +  TYN+ IDG CK G +  A +LF ++    CE    +Y+ LI+G CKI
Sbjct: 156 EVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKI 215

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            K+E A  L+  +P+VG  PNV TY+ ++ G    G++  A+ LF  M+A G++ +   +
Sbjct: 216 WKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIY 275

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
              + G  +N    + +EL + +   N
Sbjct: 276 VIFLDGLCKNGVLFEAMELFNELKSYN 302



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 131/259 (50%), Gaps = 17/259 (6%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV--- 71
           G+ P+ F  + L +  C    +         +   G + ++VTYNTLI G C+   +   
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 72  --------------EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
                         +E+  ++ EM ++G+ P V++Y++L HG     ++E + +LF+EM 
Sbjct: 65  TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V      +N  ID LCK G ++EA +L          L +  Y+ LIDG CKIG L 
Sbjct: 125 DQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLS 184

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +A +LF S+P  G   N ++Y I+I+G+C   ++++A +L+ +M   G  PN  T++TL+
Sbjct: 185 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 244

Query: 238 LGCIRNNETSKVVELLHRM 256
            G ++  +     +L   M
Sbjct: 245 TGLLQTGKVGDANKLFGVM 263


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  256 bits (655), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 126/258 (48%), Positives = 173/258 (67%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL++MIQ G+ PN F Y++LI GFCL G+++ A+ELFVSM   G   +V++YN LI
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLI 349

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCKT  VEE++ L++EML  G+ P V T   L   LF   +V+ A +LF  ++   + 
Sbjct: 350 NGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMP 409

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +      F+DGLCKNGYI EA +LF  L     +L IE + CLIDGLCK GKLETAWEL
Sbjct: 410 KDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWEL 469

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L   G+ P+ + Y+ MIHGFC  GQ+DKA+ LF  ME  G +P+ +T++ LM G   
Sbjct: 470 FEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYE 529

Query: 243 NNETSKVVELLHRMDERN 260
           +N+  KVV+LLHRM E++
Sbjct: 530 SNKLEKVVQLLHRMIEKD 547



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 135/264 (51%), Gaps = 6/264 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM------DINGCMHNVV 56
           EA++L   M + G  PN   Y TLI G C  G I+ A +    M       +  C  NV+
Sbjct: 179 EATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVI 238

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           +Y+ +I+G CK  + EE++ L++EM+ +G++P VVT++ L   L +  QV  A KL + M
Sbjct: 239 SYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMM 298

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               +     TY + I G C  G +  A ELF ++     E  + +Y+ LI+G CK  K+
Sbjct: 299 IQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKV 358

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A +LF  +  VG+ P+V T  +++      G++D A +LF  ++   +  +       
Sbjct: 359 EEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIF 418

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  +N    + ++L + ++  N
Sbjct: 419 LDGLCKNGYIFEAMKLFNELESYN 442



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 11/263 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +  DLM++     + F ++ L+ G        +   L+  M + G   +++T N LI
Sbjct: 79  QAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILI 133

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C    + E L   + ++ +G  P VVT+ TL  GL   H++  A KLF  MQ     
Sbjct: 134 NCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCT 193

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIGKL 176
               TY T I GLC  G I  A +  + +       V  C   + +YS +IDGLCK+G  
Sbjct: 194 PNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNW 253

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A  LF  +   G+ PNVVT++++I   C +GQ+ KA  L   M   G+ PN  T+ +L
Sbjct: 254 EEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSL 313

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G     + +   EL   M  +
Sbjct: 314 IKGFCLVGDLNSAKELFVSMPSK 336



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 115/234 (49%), Gaps = 13/234 (5%)

Query: 31  CLTGEID--RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
           C TG I   +A + F  M     M ++ ++N L+ G  K +   +  +LY +M   G+ P
Sbjct: 70  CKTGSISVTQAHQFFDLM-----MRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            ++T N L + L  ++++   L     +       +  T+ T I GLC    I+EA +LF
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL-----PRV-GLMPNVVTYNIMI 202
             ++ L C   +  Y  LI GLC +G +  A +  Q +     P V    PNV++Y+I+I
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G C  G  ++A  LF +M  +GV PN VTF+ L+    +  +  K  +LL  M
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMM 298



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 105/218 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L + M+  G+ P+      L+    L G++D A+ELF  +       ++     
Sbjct: 358 VEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCI 417

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++G CK   + E++ L++E+ S  ++  + T+  L  GL +  ++E A +LF+++    
Sbjct: 418 FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y++ I G CK G + +A  LF+ +    C   +  YS L+ G  +  KLE   
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
           +L   +    + P+   Y I+    C D +  +  DL 
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLL 575



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 79/153 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L + +    ++ +   +  LIDG C  G+++ A ELF  +   G   + + Y+++I
Sbjct: 430 EAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMI 489

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK   V+++  L+ +M   G  P ++TY+ L  G +E +++E  ++L   M   DV 
Sbjct: 490 HGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVW 549

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
            +   Y    D +CK+    E  +L +   V K
Sbjct: 550 PDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQK 582


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  249 bits (636), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 129/265 (48%), Positives = 173/265 (65%), Gaps = 6/265 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI---DRARELFVSMDINGCMHNVVT 57
           ++E+ RL + M+ +GV+PN   ++ LID  C  G+I     AR+LF+SM   GC HN ++
Sbjct: 214 LEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEIS 273

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  LINGYCK   VEE++NLY+EM   G RP V TY+TL  GL +  +V  A KLF  M+
Sbjct: 274 YTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMK 333

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S ++ ++  Y  F+DGLCKNG + EA ELF  L+    +L  E+YS LIDGLCK GK+E
Sbjct: 334 ASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVE 393

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA---KGVAPNCVTFN 234
            AWE F+ L + GL PNVVT NIMIHGFC   Q+DKA+ LF  ME     G  P+ +T+N
Sbjct: 394 IAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYN 453

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
           TL+ G   +N+  +VV LLH+M +R
Sbjct: 454 TLLRGFCESNKLEEVVNLLHKMFKR 478



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY- 65
           L + M   G+ P+ F  + L +  C    +         +   G + ++VTYNTLI G  
Sbjct: 112 LYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLY 171

Query: 66  --CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK    +E+  ++ EM ++G+ P V++Y++L HG     ++E + +LF+EM    V  
Sbjct: 172 GLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQP 231

Query: 124 ETSTYNTFIDGLCKNGYI---VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               +N  ID LCK G I     A +LF ++    CE    +Y+ LI+G CKI K+E A 
Sbjct: 232 NLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAM 291

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +P+VG  PNV TY+ ++ G    G++  A+ LF  M+A G++ +   +   + G 
Sbjct: 292 NLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGL 351

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N    + +EL + +   N
Sbjct: 352 CKNGVLFEAMELFNELKSYN 371



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 6/260 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    DLM++    P    ++ L+ G        +   L+  M + G   ++ T N L 
Sbjct: 73  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILA 132

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH---ALKLFDEMQHS 119
           N  C    V E L   + +L +G  P +VTYNTL  GL+ + +V H   A ++F+EM+  
Sbjct: 133 NCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQ 192

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC---KIGKL 176
            +     +Y++ + G C  G + E+  LF  +     +  +  ++ LID LC   KIG L
Sbjct: 193 GMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDL 252

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            +A +LF S+P  G   N ++Y I+I+G+C   ++++A +L+ +M   G  PN  T++TL
Sbjct: 253 SSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTL 312

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G ++  +     +L   M
Sbjct: 313 LTGLLQTGKVGDANKLFGVM 332



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 5/148 (3%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           V  A   FD M  S      S++N  + GL K  +  +   L+  +R+      +   + 
Sbjct: 71  VIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNI 130

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI---HGFCNDGQMDKAHDLFLDME 222
           L + LC + ++         + R G +P++VTYN +I   +G C  G  D+A ++F +M+
Sbjct: 131 LANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMK 190

Query: 223 AKGVAPNCVTFNTLMLG--CIRNNETSK 248
           A+G+ PN +++++L+ G  C    E SK
Sbjct: 191 AQGMIPNVISYSSLVHGFCCAGKLEESK 218


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 123/258 (47%), Positives = 175/258 (67%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA + L+ M+ RG+ P+ F +++LI+GFCL G++D A+ELF+SM   G   +V++Y  LI
Sbjct: 290 EAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLI 349

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYCKT +VEE++ LY+EML  G  P + T+  L  GLF   +V  A KLF  ++   V 
Sbjct: 350 YGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVP 409

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                 + F+DGLCKNG + EA ELF  L+    +L IE+++CLIDGLCK  KLETAWEL
Sbjct: 410 KNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWEL 469

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L + GL P+VVTY IMI+GFC +GQ+D A+ LF  ME  G  PN +T++ L+ G  +
Sbjct: 470 FEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYK 529

Query: 243 NNETSKVVELLHRMDERN 260
           NN+  +VV+LLH+M +++
Sbjct: 530 NNKLEEVVKLLHKMIQKD 547



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 134/267 (50%), Gaps = 8/267 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-------CMH 53
           + EA+RL   M + G  PN   Y TLI G C TG I+ A +L   M +NG       C  
Sbjct: 177 ISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEM-LNGTSPYAINCKP 235

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N+ +YN +I+  CK    +E+  L++EM+ +G+RP VVT++ L   L +   V  A K  
Sbjct: 236 NIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFL 295

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           + M    +  +  T+ + I+G C  G +  A ELF ++     E  + +Y+ LI G CK 
Sbjct: 296 ETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT 355

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
             +E A +L+  + RVG  P++ T+ +++ G    G++  A  LF  ++   V  N    
Sbjct: 356 FNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYIC 415

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           +  + G  +N    + +EL + +   N
Sbjct: 416 SVFLDGLCKNGCLFEAMELFNELKSYN 442



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 11/263 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +  DLM++  +      ++ L+          +   L+  M + G   N  T N LI
Sbjct: 79  QALQFFDLMMRSIIS-----FNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILI 133

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C    V E L+  + ++ +G  P VVTY +L  GL   H++  A +LF  MQ     
Sbjct: 134 NCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCW 193

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIGKL 176
               TY T I GLC+ G I  A +L + +        + C+  I +Y+ +ID LCKIGK 
Sbjct: 194 PNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKW 253

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A  LF  +   G+ P+VVT++ +I   C +G + +A      M  +G+ P+  TF +L
Sbjct: 254 KEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSL 313

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G     +     EL   M  +
Sbjct: 314 IEGFCLVGDLDSAKELFLSMPSK 336



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 88/185 (47%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L  ++    V  N ++ S  +DG C  G +  A ELF  +       ++ ++N LI
Sbjct: 395 DAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLI 454

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK + +E +  L+ ++  +G++P VVTY  + +G  +  QV++A  LF  M+ +   
Sbjct: 455 DGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCT 514

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  + G  KN  + E  +L   +      L    Y+ + D + K  K     ++
Sbjct: 515 PNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDI 574

Query: 183 FQSLP 187
            Q  P
Sbjct: 575 LQRFP 579



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 78/153 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + +    ++ +   ++ LIDG C   +++ A ELF  +   G   +VVTY  +I
Sbjct: 430 EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI 489

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK   V+ +  L+  M   G  P ++TY+ L HG ++ +++E  +KL  +M   DV+
Sbjct: 490 NGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVS 549

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
              S Y    D + K+    E  ++ +   V K
Sbjct: 550 LAASIYTIVEDMVSKDEKCREWLDILQRFPVQK 582


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  238 bits (606), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 121/262 (46%), Positives = 167/262 (63%), Gaps = 13/262 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EAS L DLM+QR V P+   Y+ LI+G+CL G +D  +++F+SM    C H+  +Y+ 
Sbjct: 339 VKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSI 398

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  YCK  +V  ++ LY EM+ +GI+PTV+TY+          +V  A KLF E+Q  D
Sbjct: 399 LMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS----------KVGDARKLFGEIQFQD 448

Query: 121 VAAET---STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           +  ++   S YN ++DGLCKNG + EA ++F  L   K    +  ++ LI+G+C+  KLE
Sbjct: 449 MVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLE 508

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            AWELF  L    L P+VVTY IMI+G C  GQ  KA+DLFL+ME KG APN VTFNTLM
Sbjct: 509 IAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLM 568

Query: 238 LGCIRNNETSKVVELLHRMDER 259
            G   N+E  K+VELLH+M  R
Sbjct: 569 RGLCLNSERPKIVELLHKMAAR 590



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 28/268 (10%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P    YS +ID  C  G ++RA+E FV M   G   NVVTY +L++G C   + EE+  
Sbjct: 250 KPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKR 309

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L+ EM+  G+ P VVT++ L   L ++ +V+ A  LFD M    V   T TYN  I+G C
Sbjct: 310 LFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYC 369

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
             G + E  ++F ++   +C+    +YS L+   CK  ++  A  L++ +   G+ P V+
Sbjct: 370 LAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVI 429

Query: 197 T----------------------------YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           T                            YN+ + G C +G + +A D+F  +E    A 
Sbjct: 430 TYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFAS 489

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N   FN+L+ G  R+ +     EL +R+
Sbjct: 490 NVAIFNSLINGMCRSEKLEIAWELFNRL 517



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 133/263 (50%), Gaps = 6/263 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   +  +++++G RPN   ++ L+ G CL G+I  A  +F  M +  C  + +T   LI
Sbjct: 160 EGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLI 219

Query: 63  NGYCKTKDVEESLNLYSEMLSK----GI--RPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           +G C+T +   +L L+  M++     GI  +PTVV+Y+ +   L +   VE A + F EM
Sbjct: 220 SGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEM 279

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +   +     TY + + GLC      EA  LF  +        +  +S LI  LCK+GK+
Sbjct: 280 KEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKV 339

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A  LF  + +  + P+  TYNI+I G+C  G +D+   +FL M  K    +  +++ L
Sbjct: 340 KEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSIL 399

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           M    +++E    + L   M +R
Sbjct: 400 MKAYCKDSEVHGAMILYREMMDR 422



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 122/243 (50%), Gaps = 8/243 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-------CMH 53
           + EA R+  +M     RP+A     LI G C TG    A +L  +M ING       C  
Sbjct: 193 IGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAM-INGNSDFGINCKP 251

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
            VV+Y+ +I+  CK   VE +   + EM  KGI P VVTY +L HGL    + E A +LF
Sbjct: 252 TVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLF 311

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            EM    +  +  T++  I  LCK G + EA+ LF  +     E     Y+ LI+G C  
Sbjct: 312 IEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLA 371

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G ++   ++F S+       +  +Y+I++  +C D ++  A  L+ +M  +G+ P  +T+
Sbjct: 372 GMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITY 431

Query: 234 NTL 236
           + +
Sbjct: 432 SKV 434



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 6/265 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA    + MI     P    ++ L        +      +   M+  G + N ++ N 
Sbjct: 88  LHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNI 147

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  C  K V E   ++  +L KG RP   T+  L  GL    ++  A+++F  M   D
Sbjct: 148 LLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFD 207

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIG 174
                 T    I GLC+ G    A +L   +        + C+  + +YSC+ID LCK G
Sbjct: 208 CRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDG 267

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            +E A E F  +   G+ PNVVTY  ++HG C+  + ++A  LF++M   G+ P+ VTF+
Sbjct: 268 LVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFS 327

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
            L+    +  +  +   L   M +R
Sbjct: 328 VLIGALCKVGKVKEASGLFDLMVQR 352



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 81/166 (48%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           +Y+  +DG C  G +  A ++F  ++      NV  +N+LING C+++ +E +  L++ +
Sbjct: 458 IYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRL 517

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            ++ ++P VVTY  + +GL ++ Q + A  LF EM+    A    T+NT + GLC N   
Sbjct: 518 CNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSER 577

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
            +  EL   +   K          ++D L K         L  + P
Sbjct: 578 PKIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNLLPTFP 623



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 69/135 (51%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  ++++LI+G C + +++ A ELF  +       +VVTY  +I G CK    +++ +L+
Sbjct: 490 NVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLF 549

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM  KG  P VVT+NTL  GL    +    ++L  +M    ++ + ST    +D L K+
Sbjct: 550 LEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKD 609

Query: 139 GYIVEAAELFRTLRV 153
               E   L  T  V
Sbjct: 610 ENYHECLNLLPTFPV 624



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 11/197 (5%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFH--------GLFEIHQVEHALKLFDEMQHSDVAA 123
           E+ +N  S+ L     P   + N L          G F +H+   AL  F++M H     
Sbjct: 49  EQFINFKSKTLPINSTPNTQSDNPLEQFLEINCKSGDFTLHE---ALHFFNQMIHMQTTP 105

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             S +N     L K    +    +   +  +       + + L++ LC + ++   + +F
Sbjct: 106 ALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVF 165

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + R G  PN  T+  ++ G C +G++ +A  +F  M      P+ +T   L+ G  R 
Sbjct: 166 GMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRT 225

Query: 244 NETSKVVELLHRMDERN 260
             T   ++L   M   N
Sbjct: 226 GNTCNALKLHEAMINGN 242


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  230 bits (586), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 108/258 (41%), Positives = 165/258 (63%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++L+LM  +G  P+   Y+TL++G CL G+++ A +LF S+   G   NV +YN LI
Sbjct: 269 EAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 328

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + ++E+  L+ EM  KG++P+ VTYNTL   L +  +V  A KLF EMQ     
Sbjct: 329 NGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 388

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + STY   +DGLCKNG++ EA +LF++++  + +  IE +S L+DG+C+ GKLE AW+ 
Sbjct: 389 LKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 448

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + + GL P+ + YNI+I+G CN G + +A  L   ME KG  P+ +TFN ++   ++
Sbjct: 449 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 508

Query: 243 NNETSKVVELLHRMDERN 260
            NE  + ++LL  M  RN
Sbjct: 509 ENEIHEAIQLLEEMRNRN 526



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 145/272 (53%), Gaps = 36/272 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A +L D M ++G+  +A  Y  LI+G C   +   A +L   M  N C  +V TY  
Sbjct: 93  IPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGM 151

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK     E+L+++SEM+  GI P VV Y++L  GL    +++ AL+ F EM+   
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 211

Query: 121 VAAETSTYNT-----------------------------------FIDGLCKNGYIVEAA 145
           ++A+  TYN+                                    IDGLCK G + EA 
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 271

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++   +     E  I  Y+ L++GLC +G+LE A +LF+SL   G+  NV +YNI+I+G+
Sbjct: 272 QILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 331

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           C D ++D+A  LF +M  KG+ P+ VT+NTL+
Sbjct: 332 CKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLI 363



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 137/259 (52%), Gaps = 6/259 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   MI  G+ P+  VYS+L+DG C  G +  A E F  M+  G   +V TYN+LI
Sbjct: 164 EALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 223

Query: 63  NGYCKT---KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +G  +    K+V   LNL   M+ +G  P   T+  L  GL +  +V  A ++ + M H 
Sbjct: 224 HGLSRAGLWKEVTWFLNL---MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHK 280

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TYNT ++GLC  G + +A +LF +L     +L + +Y+ LI+G CK  K++ A
Sbjct: 281 GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEA 340

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + LF+ +   GL P+ VTYN +I   C  G++  A  LF++M+  G      T+  L+ G
Sbjct: 341 FRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 400

Query: 240 CIRNNETSKVVELLHRMDE 258
             +N    + ++L   + +
Sbjct: 401 LCKNGHLEEAIDLFQSIKK 419



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 126/241 (52%), Gaps = 2/241 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A++L + +  RG++ N F Y+ LI+G+C   +ID A  LF  M   G   + VTYNT
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   C++  V  +  L+ EM + G    + TY  L  GL +   +E A+ LF  ++ ++
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  ++  +DG+C+ G + EA + F  +     E    AY+ LI+GLC  G L  A 
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 481

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G +P+ +T+N++I     + ++ +A  L  +M  +  +P+     T ML C
Sbjct: 482 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAV--TSMLLC 539

Query: 241 I 241
           +
Sbjct: 540 L 540



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 1/178 (0%)

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           L +G  P  VT  TL  G++  + +  A++LFDEM    +  +  TY   I+GLCK    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
             A +L   ++   C+  +  Y  +ID LCK G    A ++F  +   G++P+VV Y+ +
Sbjct: 129 GLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + G C  G++ +A + F +ME +G++ +  T+N+L+ G  R     +V   L+ M +R
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 245


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  229 bits (583), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 107/258 (41%), Positives = 164/258 (63%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA ++L+LM  +G  P+   Y+TL++G CL G+++ A +LF S+   G   NV +YN LI
Sbjct: 1208 EAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 1267

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            NGYCK + ++E+   + EM  KG++P+ VTYNTL   L +  +V  A KLF EMQ     
Sbjct: 1268 NGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 1327

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + STY   +DGLCKNG++ EA +LF++++  + +  IE +S L+DG+C+ GKLE AW+ 
Sbjct: 1328 LKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 1387

Query: 183  FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            F  + + GL P+ + YNI+I+G CN G + +A  L   ME KG  P+ +TFN ++   ++
Sbjct: 1388 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 1447

Query: 243  NNETSKVVELLHRMDERN 260
             NE  + ++LL  M  RN
Sbjct: 1448 ENEIHEAIQLLEEMRNRN 1465



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 145/272 (53%), Gaps = 36/272 (13%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + +A +L D M ++G+  +A  Y  LI+G C   +   A +L   M  N C  +V TY  
Sbjct: 1032 IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGM 1090

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +I+  CK     E+L+++SEM+  GI P VV Y++L  GL    +++ AL+ F EM+   
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150

Query: 121  VAAETSTYNT-----------------------------------FIDGLCKNGYIVEAA 145
            ++A+  TYN+                                    IDGLCK G + EA 
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 1210

Query: 146  ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            ++   +R    E  I  Y+ L++GLC +G+LE A +LF+SL   G+  NV +YNI+I+G+
Sbjct: 1211 QILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 1270

Query: 206  CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            C D ++D+A   F +M  KG+ P+ VT+NTL+
Sbjct: 1271 CKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 137/259 (52%), Gaps = 6/259 (2%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA  +   MI  G+ P+  VYS+L+DG C  G +  A E F  M+  G   +V TYN+LI
Sbjct: 1103 EALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 1162

Query: 63   NGYCKT---KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +G  +    K+V   LNL   M+ +G  P   T+  L  GL +  +V  A ++ + M+H 
Sbjct: 1163 HGLSRAGLWKEVTWFLNL---MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHK 1219

Query: 120  DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                +  TYNT ++GLC  G + +A +LF +L     +L + +Y+ LI+G CK  K++ A
Sbjct: 1220 GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEA 1279

Query: 180  WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +  F+ +   GL P+ VTYN +I   C  G++  A  LF++M+  G      T+  L+ G
Sbjct: 1280 FRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 1339

Query: 240  CIRNNETSKVVELLHRMDE 258
              +N    + ++L   + +
Sbjct: 1340 LCKNGHLEEAMDLFQSIKK 1358



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 125/241 (51%), Gaps = 2/241 (0%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +++A++L + +  RG++ N F Y+ LI+G+C   +ID A   F  M   G   + VTYNT
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LI   C++  V  +  L+ EM + G    + TY  L  GL +   +E A+ LF  ++ ++
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                   ++  +DG+C+ G + EA + F  +     E    AY+ LI+GLC  G L  A 
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 1420

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +L   +   G +P+ +T+N++I     + ++ +A  L  +M  +  +P+     T ML C
Sbjct: 1421 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAV--TSMLLC 1478

Query: 241  I 241
            +
Sbjct: 1479 L 1479



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 1/259 (0%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +++A +L D  +     P    ++ L+      G       ++  ++  G   ++ T N 
Sbjct: 927  LNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNI 986

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LI+  C  + V     ++   L +G  P  VT  TL  G++  + +  A++LFDEM    
Sbjct: 987  LIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKG 1046

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  +  TY   I+GLCK      A +L   ++   C+  +  Y  +ID LCK G    A 
Sbjct: 1047 LLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEAL 1105

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            ++F  +   G++P+VV Y+ ++ G C  G++ +A + F +ME +G++ +  T+N+L+ G 
Sbjct: 1106 DMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL 1165

Query: 241  IRNNETSKVVELLHRMDER 259
             R     +V   L+ M +R
Sbjct: 1166 SRAGLWKEVTWFLNLMVDR 1184



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 70/156 (44%)

Query: 101  FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
            F I ++  A+KLFD    S+    T T+N  +  + K GY      ++R +  +  +  +
Sbjct: 922  FGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDL 981

Query: 161  EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
               + LI   C +  +   + +F    + G  P+ VT   ++ G   +  +  A  LF +
Sbjct: 982  YTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDE 1041

Query: 221  MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            M  KG+  +  T+  L+ G  +  +T   ++L  +M
Sbjct: 1042 MTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM 1077


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/257 (42%), Positives = 159/257 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MI RGV PN   Y+ L+DG CL  E+D A ++F +M    C+ NV++YNTLI
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + V++++ L+ EM  + + P  VTYNTL HGL  + +++ A+ LF EM      
Sbjct: 358 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 417

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T  D LCKN ++ +A  L + +     +  I+ Y+ ++DG+C+ G+LE A +L
Sbjct: 418 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 477

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL PNV TYNIMIHG C  G + +A  LF +M   G +PN  T+N +  G +R
Sbjct: 478 FSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR 537

Query: 243 NNETSKVVELLHRMDER 259
           NNE  + +ELL  M  R
Sbjct: 538 NNEALRTIELLEEMLAR 554



 Score =  187 bits (474), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 150/293 (51%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D MI  G +PN   Y TLI+G C  G    A  L  SM+   C  NVV ++TLI
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ N++SEM++KGI P +VTYN+L HGL ++ + +H   L +EM  S + 
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277

Query: 123 AETSTYNTFIDGLCKNGYIVE-----------------------------------AAEL 147
            +  T NT +D LCK G + E                                   A ++
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F T+    C   + +Y+ LI+G CKI  ++ A  LF+ + R  L PN VTYN +IHG C+
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G++  A  LF +M A+G  P+ VT+ TL     +N    K + LL  ++  N
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 135/254 (53%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           + L++ M+   + P+ F  +T++D  C  G +  A ++   M   G   NVVTYN L++G
Sbjct: 265 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 324

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +C   +V+ ++ ++  M+ K     V++YNTL +G  +I  V+ A+ LF+EM   ++   
Sbjct: 325 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 384

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           T TYNT I GLC  G + +A  LF  +        +  Y  L D LCK   L+ A  L +
Sbjct: 385 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 444

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           ++      P++  Y  ++ G C  G+++ A DLF ++ +KG+ PN  T+N ++ G  +  
Sbjct: 445 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 504

Query: 245 ETSKVVELLHRMDE 258
             ++  +L   M++
Sbjct: 505 LLAEASKLFSEMNK 518



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 139/251 (55%), Gaps = 1/251 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ D M+ +    N   Y+TLI+G+C    +D+A  LF  M       N VTYNT
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++++++L+ EM+++G  P +VTY TL   L +   ++ A+ L   ++ S+
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y T +DG+C+ G + +A +LF  L     +  +  Y+ +I GLCK G L  A 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + + G  PN  TYN++  GF  + +  +  +L  +M A+G + + V+  TL++G 
Sbjct: 511 KLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGM 569

Query: 241 IRNNETSKVVE 251
           + ++   + V+
Sbjct: 570 LSDDGLDQSVK 580



 Score =  137 bits (344), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%), Gaps = 4/243 (1%)

Query: 5   SRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           S LL L  Q    G+ P+ +  + +I+  C    +D A      +   G   +  T+ TL
Sbjct: 87  STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTL 146

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C    + E+L+L+ +M+ +G +P VVTY TL +GL ++     A++L   M+  + 
Sbjct: 147 IRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 206

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 ++T ID LCK+  + EA  +F  +        I  Y+ LI GLCK+ + +    
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 266

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-C 240
           L   +    +MP+V T N ++   C +G + +AHD+   M  +GV PN VT+N LM G C
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 326

Query: 241 IRN 243
           +RN
Sbjct: 327 LRN 329



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 78/169 (46%)

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           ++NT        + ++ AL  F+ M H      T  +N  +  + K  +      L R +
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
                   +   + +I+ LC + +++ A+     + ++G  P+  T+  +I G C +G++
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +A  LF  M  +G  PN VT+ TL+ G  +   TS  + LL  M++ N
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 205


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/257 (42%), Positives = 159/257 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D MIQRGV PN   Y+ L+DG CL  E+D A ++F +M   GCM NV++YNTLI
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + +++++ L+ EM  + + P  VTY+TL HGL  + +++ A+ LF EM      
Sbjct: 349 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 408

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   +D LCKN Y+ EA  L + +     +  I+  +  IDG+C+ G+LE A +L
Sbjct: 409 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 468

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL P+V TY+IMI+G C  G +D+A  LF +M+  G   N   +NT+  G +R
Sbjct: 469 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 528

Query: 243 NNETSKVVELLHRMDER 259
           NNETS+ ++LL  M  R
Sbjct: 529 NNETSRAIQLLQEMVAR 545



 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 143/254 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D MI  G RP+   Y TLI+G C  G    A  L  SM    C  NV  YNT+I
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ NL+SEM++KGI P + TYN+L H L  + + +H   L +EM  S + 
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  ++NT +D LCK G + EA ++   +     E  +  Y+ L+DG C + +++ A ++
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G MPNV++YN +I+G+C   ++DKA  LF +M  + + P+ VT++TL+ G   
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 388

Query: 243 NNETSKVVELLHRM 256
                  + L H M
Sbjct: 389 VERLQDAIALFHEM 402



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           M   S LL L  Q    G+ PN +    LI+ FC    +  A  +   +   G   +  T
Sbjct: 74  MKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTAT 133

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           + TLI G      + E+L+L+ +M+ +G RP VVTY TL +GL ++     A++L   M 
Sbjct: 134 FTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 193

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             +       YNT ID LCK+  + EA  LF  +        I  Y+ LI  LC + + +
Sbjct: 194 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 253

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               L   +    +MP+VV++N ++   C +G++ +AHD+   M  +GV PN VT+  LM
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313

Query: 238 LGCIRNNETSKVVELLHRM 256
            G    +E  + V++   M
Sbjct: 314 DGHCLLSEMDEAVKVFDTM 332



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 125/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A    + M++    P+   ++ L+              L   MD  G   N+ T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    V  + ++ +++L  G +P   T+ TL  G++   ++  AL LFD+M    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK G    A  L  ++    C+  + AY+ +ID LCK  ++  A+
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G+ P++ TYN +IH  CN  +      L  +M    + P+ V+FNT++   
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 241 IRNNETSKVVELLHRMDER 259
            +  + ++  +++ +M +R
Sbjct: 282 CKEGKVTEAHDVVDKMIQR 300



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  +    + P+  V +  IDG C  GE++ AR+LF ++   G   +V TY+ 
Sbjct: 427 LAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSI 486

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+   ++E+  L+ EM   G       YNT+  G    ++   A++L  EM    
Sbjct: 487 MINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 546

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFR 149
            +A+ ST   F+  L  +G      ++ R
Sbjct: 547 FSADASTMTLFVKMLSDDGLDQSLKQILR 575


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/257 (42%), Positives = 159/257 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MI RGV PN   Y+ L+DG CL  E+D A ++F +M    C+ NV++YNTLI
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + V++++ L+ EM  + + P  VTYNTL HGL  + +++ A+ LF EM      
Sbjct: 358 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 417

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T  D LCKN ++ +A  L + +     +  I+ Y+ ++DG+C+ G+LE A +L
Sbjct: 418 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 477

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL PNV TYNIMIHG C  G + +A  LF +M   G +PN  T+N +  G +R
Sbjct: 478 FSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR 537

Query: 243 NNETSKVVELLHRMDER 259
           NNE  + +ELL  M  R
Sbjct: 538 NNEALRTIELLEEMLAR 554



 Score =  186 bits (473), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 150/293 (51%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D MI  G +PN   Y TLI+G C  G    A  L  SM+   C  NVV ++TLI
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ N++SEM++KGI P +VTYN+L HGL ++ + +H   L +EM  S + 
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277

Query: 123 AETSTYNTFIDGLCKNGYIVE-----------------------------------AAEL 147
            +  T NT +D LCK G + E                                   A ++
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F T+    C   + +Y+ LI+G CKI  ++ A  LF+ + R  L PN VTYN +IHG C+
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G++  A  LF +M A+G  P+ VT+ TL     +N    K + LL  ++  N
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 135/254 (53%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           + L++ M+   + P+ F  +T++D  C  G +  A ++   M   G   NVVTYN L++G
Sbjct: 265 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 324

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +C   +V+ ++ ++  M+ K     V++YNTL +G  +I  V+ A+ LF+EM   ++   
Sbjct: 325 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 384

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           T TYNT I GLC  G + +A  LF  +        +  Y  L D LCK   L+ A  L +
Sbjct: 385 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 444

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           ++      P++  Y  ++ G C  G+++ A DLF ++ +KG+ PN  T+N ++ G  +  
Sbjct: 445 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 504

Query: 245 ETSKVVELLHRMDE 258
             ++  +L   M++
Sbjct: 505 LLAEASKLFSEMNK 518



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 139/251 (55%), Gaps = 1/251 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ D M+ +    N   Y+TLI+G+C    +D+A  LF  M       N VTYNT
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++++++L+ EM+++G  P +VTY TL   L +   ++ A+ L   ++ S+
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y T +DG+C+ G + +A +LF  L     +  +  Y+ +I GLCK G L  A 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + + G  PN  TYN++  GF  + +  +  +L  +M A+G + + V+  TL++G 
Sbjct: 511 KLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGM 569

Query: 241 IRNNETSKVVE 251
           + ++   + V+
Sbjct: 570 LSDDGLDQSVK 580



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 1/230 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P+ +  + +I+  C    +D A      +   G   +  T+ TLI G C    + E+
Sbjct: 100 GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA 159

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+L+ +M+ +G +P VVTY TL +GL ++     A++L   M+  +       ++T ID 
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDS 219

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + EA  +F  +        I  Y+ LI GLCK+ + +    L   +    +MP+
Sbjct: 220 LCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 279

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN 243
           V T N ++   C +G + +AHD+   M  +GV PN VT+N LM G C+RN
Sbjct: 280 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 78/169 (46%)

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           ++NT        + ++ AL  F+ M H      T  +N  +  + K  +      L R +
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
                   +   + +I+ LC + +++ A+     + ++G  P+  T+  +I G C +G++
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +A  LF  M  +G  PN VT+ TL+ G  +   TS  + LL  M++ N
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 205


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/257 (42%), Positives = 159/257 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MI RGV PN   Y+ L+DG CL  E+D A ++F +M    C+ NV++YNTLI
Sbjct: 238 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 297

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + V++++ L+ EM  + + P  VTYNTL HGL  + +++ A+ LF EM      
Sbjct: 298 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 357

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T  D LCKN ++ +A  L + +     +  I+ Y+ ++DG+C+ G+LE A +L
Sbjct: 358 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 417

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL PNV TYNIMIHG C  G + +A  LF +M   G +PN  T+N +  G +R
Sbjct: 418 FSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR 477

Query: 243 NNETSKVVELLHRMDER 259
           NNE  + +ELL  M  R
Sbjct: 478 NNEALRTIELLEEMLAR 494



 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 141/229 (61%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  ++D+MI+RGV P+   Y+ L+DG CL  E+D A ++F +M   GC+ NV +YN LIN
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+ + +++++ L  +M  +G+    VTYNTL HGL  + +++HA+ LF EM  S    
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 846

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY   +D LCKN ++ EA  L + +     +  I  Y+  IDG+C+ G+LE A +LF
Sbjct: 847 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 906

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            +L   GL P+V TYNIMIHG C  G +D+A+ LF  M+   +  N  +
Sbjct: 907 SNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955



 Score =  183 bits (464), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 155/295 (52%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A   L  +++ G +P+A  ++TLI G C+ G+I  A  LF  M   G   NVVTY T
Sbjct: 96  VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGT 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK + V E+ N++SEM++KGI P +VTYN+L HGL ++ + +H   L +EM  S 
Sbjct: 156 LINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 215

Query: 121 VAAETSTYNTFIDGLCKNGYIVE-----------------------------------AA 145
           +  +  T NT +D LCK G + E                                   A 
Sbjct: 216 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 275

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++F T+    C   + +Y+ LI+G CKI  ++ A  LF+ + R  L PN VTYN +IHG 
Sbjct: 276 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 335

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C+ G++  A  LF +M A+G  P+ VT+ TL     +N    K + LL  ++  N
Sbjct: 336 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 390



 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 139/258 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
             + LL+ M+   + PN  V+ST++D  C  G I  A ++   M   G   +VVTY  L+
Sbjct: 691 HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 750

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C   +++E++ ++  M+ KG  P V +YN L +G  +I +++ A+ L ++M    + 
Sbjct: 751 DGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI 810

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+T TYNT I GLC  G +  A  LF  +        +  Y  L+D LCK   L  A  L
Sbjct: 811 ADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL 870

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +++    L  +++ YNI I G C  G+++ A DLF ++ +KG+ P+  T+N ++ G  +
Sbjct: 871 LKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCK 930

Query: 243 NNETSKVVELLHRMDERN 260
                +  +L  +MDE +
Sbjct: 931 RGLLDEANKLFRKMDEND 948



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 135/256 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
             + L++ M+   + P+ F  +T++D  C  G +  A ++   M   G   NVVTYN L+
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C   +V+ ++ ++  M+ K     V++YNTL +G  +I  V+ A+ LF+EM   ++ 
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TYNT I GLC  G + +A  LF  +        +  Y  L D LCK   L+ A  L
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +++      P++  Y  ++ G C  G+++ A DLF ++ +KG+ PN  T+N ++ G  +
Sbjct: 383 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 442

Query: 243 NNETSKVVELLHRMDE 258
               ++  +L   M++
Sbjct: 443 QGLLAEASKLFSEMNK 458



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 139/251 (55%), Gaps = 1/251 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ D M+ +    N   Y+TLI+G+C    +D+A  LF  M       N VTYNT
Sbjct: 271 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 330

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++++++L+ EM+++G  P +VTY TL   L +   ++ A+ L   ++ S+
Sbjct: 331 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 390

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y T +DG+C+ G + +A +LF  L     +  +  Y+ +I GLCK G L  A 
Sbjct: 391 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 450

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + + G  PN  TYN++  GF  + +  +  +L  +M A+G + + V+  TL++G 
Sbjct: 451 KLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGM 509

Query: 241 IRNNETSKVVE 251
           + ++   + V+
Sbjct: 510 LSDDGLDQSVK 520



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 130/259 (50%), Gaps = 16/259 (6%)

Query: 1   MDEASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           M   S +L L  Q    G+ P+ +  + LI+ FC    +  A  +   +   G   +VVT
Sbjct: 594 MKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVT 653

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y TL+NG CK             M++KGI P + TYN+L H L  + + +H   L +EM 
Sbjct: 654 YGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 700

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           +S +      ++T +D LCK G I  A ++   +     E  +  Y+ L+DG C   +++
Sbjct: 701 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 760

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A ++F ++   G +PNV +YNI+I+G+C   +MDKA  L   M  +G+  + VT+NTL+
Sbjct: 761 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 820

Query: 238 LGCIRNNETSKVVELLHRM 256
            G          + L H M
Sbjct: 821 HGLCHVGRLQHAIALFHEM 839



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 106/186 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D M+ +G  PN   Y+ LI+G+C    +D+A  L   M + G + + VTYNT
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 818

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++ ++ L+ EM++ G  P +VTY  L   L + H +  A+ L   ++ S+
Sbjct: 819 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 878

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+   YN  IDG+C+ G +  A +LF  L     +  +  Y+ +I GLCK G L+ A 
Sbjct: 879 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 938

Query: 181 ELFQSL 186
           +LF+ +
Sbjct: 939 KLFRKM 944



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 117/244 (47%), Gaps = 1/244 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA    + M+ +   P+   ++ L+     T        L   MD  G   +V T   
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  C    V+ + +  +++L  G +P   T+ TL  GL    ++  AL LFD+M    
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GLCK+  + EA  +F  +        I  Y+ LI GLCK+ + +   
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            L   +    +MP+V T N ++   C +G + +AHD+   M  +GV PN VT+N LM G 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 240 CIRN 243
           C+RN
Sbjct: 266 CLRN 269



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 35/162 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY-- 58
           MD+A  LL+ M  +G+  +   Y+TLI G C  G +  A  LF  M  +G + ++VTY  
Sbjct: 794 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 853

Query: 59  ---------------------------------NTLINGYCKTKDVEESLNLYSEMLSKG 85
                                            N  I+G C+  ++E + +L+S + SKG
Sbjct: 854 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 913

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           ++P V TYN + HGL +   ++ A KLF +M  +D+ + +++
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 75/165 (45%)

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           ++NT        + ++ AL  F+ M H      T  +N  +  + K  +      L R +
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
                   +   + +I+ LC + +++ A+     + ++G  P+  T+  +I G C +G++
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +A  LF  M  +G  PN VT+ TL+ G  ++ + ++   +   M
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEM 176



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 121/325 (37%), Gaps = 72/325 (22%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EAS+L   M + G  PN   Y+ +  GF    E  R  EL   M   G   +V T   L+
Sbjct: 448 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 507

Query: 63  NGY-------------CKTKD---------------------------------VEESLN 76
                           CK                                    ++++L+
Sbjct: 508 GMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALS 567

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            ++ ML     P+ V +  L   + ++      L L  +M    +  +  T N  I+  C
Sbjct: 568 SFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFC 627

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF------------- 183
               +  A  +   L  L  +  +  Y  L++GLCK+     + ++F             
Sbjct: 628 HLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLC 687

Query: 184 ---------QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
                      +    +MPNVV ++ ++   C +G +  AHD+   M  +GV P+ VT+ 
Sbjct: 688 EWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYT 747

Query: 235 TLMLG-CIRN--NETSKVVE-LLHR 255
            LM G C+R+  +E  KV + ++H+
Sbjct: 748 ALMDGHCLRSEMDEAVKVFDTMVHK 772


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  218 bits (555), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/254 (42%), Positives = 153/254 (60%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F YS+LI+GFC+   +D A+ +F  M    C  NVVTYNTLI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK K VEE + L+ EM  +G+    VTYNTL  GLF+    + A K+F +M    V 
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLCK G + +A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ PNV+ Y  MI GFC  G  ++A  LF +M+  G  PN  T+NTL+   +R
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 583 DGDKAASAELIKEM 596



 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 142/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + PN   +S LID F   G++  A +L+  M       ++ TY++LI
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+ +++  M+SK   P VVTYNTL  G  +  +VE  ++LF EM    + 
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TYNT I GL + G    A ++F+ +        I  YS L+DGLCK GKLE A  +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L +  + P++ TYNIMI G C  G+++   DLF  +  KGV PN + + T++ G  R
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547

Query: 243 NNETSKVVELLHRMDE 258
                +   L   M E
Sbjct: 548 KGLKEEADALFREMKE 563



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 141/254 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+ RG +P+ F Y T+++G C  G+ID A  L   M+      +VV Y T+I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  C  K+V ++LNL++EM +KGIRP VVTYN+L   L    +   A +L  +M    + 
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  ID   K G +VEA +L+  +     +  I  YS LI+G C   +L+ A  +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +      PNVVTYN +I GFC   ++++  +LF +M  +G+  N VT+NTL+ G  +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442

Query: 243 NNETSKVVELLHRM 256
             +     ++  +M
Sbjct: 443 AGDCDMAQKIFKKM 456



 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 129/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + +LMI +   PN   Y+TLI GFC    ++   ELF  M   G + N VTYNT
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +  D + +  ++ +M+S G+ P ++TY+ L  GL +  ++E AL +F+ +Q S 
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+G+CK G + +  +LF +L +   +  +  Y+ +I G C+ G  E A 
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ +   G +PN  TYN +I     DG    + +L  +M + G   +  T + ++
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M     +PN   ++TLI G  L  +   A  L   M   GC  ++ TY T
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ +L+L  +M    I   VV Y T+   L     V  AL LF EM +  
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ I  LC  G   +A+ L   +   K    +  +S LID   K GKL  A 
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++ TY+ +I+GFC   ++D+A  +F  M +K   PN VT+NTL+ G 
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +EL   M +R
Sbjct: 406 CKAKRVEEGMELFREMSQR 424



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 7/260 (2%)

Query: 8   LDLMIQRGVRP-------NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            DL+I  G R        + + Y+ LI+ FC   ++  A  +   M   G   ++VT ++
Sbjct: 96  FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYC  K + E++ L  +M     +P  VT+NTL HGLF  ++   A+ L D M    
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T ++GLCK G I  A  L + +   K E  +  Y+ +ID LC    +  A 
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G+ PNVVTYN +I   CN G+   A  L  DM  + + PN VTF+ L+   
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++  +  +  +L   M +R+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRS 355



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 124/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+Q    P+   ++ L+       + D    L   M      +++ +YN 
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  +L +  +M+  G  P +VT ++L +G     ++  A+ L D+M   +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T T+NT I GL  +    EA  L   +    C+  +  Y  +++GLCK G ++ A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + + +  +  +VV Y  +I   CN   ++ A +LF +M+ KG+ PN VT+N+L+   
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 241 IRNNETSKVVELLHRMDERN 260
                 S    LL  M ER 
Sbjct: 301 CNYGRWSDASRLLSDMIERK 320



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 4/145 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + + +  + P+ + Y+ +I+G C  G+++   +LF S+ + G   NV+ Y T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C+    EE+  L+ EM   G  P   TYNTL            + +L  EM+   
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 121 VAAETSTYNTFI----DGLCKNGYI 141
              + ST +  I    DG  +  Y+
Sbjct: 601 FVGDASTISMVINMLHDGRLEKSYL 625


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  218 bits (555), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/254 (42%), Positives = 153/254 (60%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F YS+LI+GFC+   +D A+ +F  M    C  NVVTYNTLI
Sbjct: 327 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 386

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK K VEE + L+ EM  +G+    VTYNTL  GLF+    + A K+F +M    V 
Sbjct: 387 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 446

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLCK G + +A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 447 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 506

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ PNV+ Y  MI GFC  G  ++A  LF +M+  G  PN  T+NTL+   +R
Sbjct: 507 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 566

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 567 DGDKAASAELIKEM 580



 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 142/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + PN   +S LID F   G++  A +L+  M       ++ TY++LI
Sbjct: 292 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+ +++  M+SK   P VVTYNTL  G  +  +VE  ++LF EM    + 
Sbjct: 352 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 411

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TYNT I GL + G    A ++F+ +        I  YS L+DGLCK GKLE A  +
Sbjct: 412 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 471

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L +  + P++ TYNIMI G C  G+++   DLF  +  KGV PN + + T++ G  R
Sbjct: 472 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 531

Query: 243 NNETSKVVELLHRMDE 258
                +   L   M E
Sbjct: 532 KGLKEEADALFREMKE 547



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 141/254 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+ RG +P+ F Y T+++G C  G+ID A  L   M+      +VV Y T+I
Sbjct: 187 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 246

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  C  K+V ++LNL++EM +KGIRP VVTYN+L   L    +   A +L  +M    + 
Sbjct: 247 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 306

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  ID   K G +VEA +L+  +     +  I  YS LI+G C   +L+ A  +
Sbjct: 307 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 366

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +      PNVVTYN +I GFC   ++++  +LF +M  +G+  N VT+NTL+ G  +
Sbjct: 367 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 426

Query: 243 NNETSKVVELLHRM 256
             +     ++  +M
Sbjct: 427 AGDCDMAQKIFKKM 440



 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 129/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + +LMI +   PN   Y+TLI GFC    ++   ELF  M   G + N VTYNT
Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 419

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +  D + +  ++ +M+S G+ P ++TY+ L  GL +  ++E AL +F+ +Q S 
Sbjct: 420 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 479

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+G+CK G + +  +LF +L +   +  +  Y+ +I G C+ G  E A 
Sbjct: 480 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 539

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ +   G +PN  TYN +I     DG    + +L  +M + G   +  T + ++
Sbjct: 540 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 596



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M     +PN   ++TLI G  L  +   A  L   M   GC  ++ TY T
Sbjct: 150 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 209

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ +L+L  +M    I   VV Y T+   L     V  AL LF EM +  
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ I  LC  G   +A+ L   +   K    +  +S LID   K GKL  A 
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 329

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++ TY+ +I+GFC   ++D+A  +F  M +K   PN VT+NTL+ G 
Sbjct: 330 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 389

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +EL   M +R
Sbjct: 390 CKAKRVEEGMELFREMSQR 408



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 7/260 (2%)

Query: 8   LDLMIQRGVRP-------NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            DL+I  G R        + + Y+ LI+ FC   ++  A  +   M   G   ++VT ++
Sbjct: 80  FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 139

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYC  K + E++ L  +M     +P  VT+NTL HGLF  ++   A+ L D M    
Sbjct: 140 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 199

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T ++GLCK G I  A  L + +   K E  +  Y+ +ID LC    +  A 
Sbjct: 200 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 259

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G+ PNVVTYN +I   CN G+   A  L  DM  + + PN VTF+ L+   
Sbjct: 260 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++  +  +  +L   M +R+
Sbjct: 320 VKEGKLVEAEKLYDEMIKRS 339



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 124/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+Q    P+   ++ L+       + D    L   M      +++ +YN 
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  +L +  +M+  G  P +VT ++L +G     ++  A+ L D+M   +
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T T+NT I GL  +    EA  L   +    C+  +  Y  +++GLCK G ++ A 
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + + +  +  +VV Y  +I   CN   ++ A +LF +M+ KG+ PN VT+N+L+   
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 241 IRNNETSKVVELLHRMDERN 260
                 S    LL  M ER 
Sbjct: 285 CNYGRWSDASRLLSDMIERK 304



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 4/145 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + + +  + P+ + Y+ +I+G C  G+++   +LF S+ + G   NV+ Y T
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C+    EE+  L+ EM   G  P   TYNTL            + +L  EM+   
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584

Query: 121 VAAETSTYNTFI----DGLCKNGYI 141
              + ST +  I    DG  +  Y+
Sbjct: 585 FVGDASTISMVINMLHDGRLEKSYL 609


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 106/257 (41%), Positives = 162/257 (63%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MI RGV PN   Y+ L+DG CL  E+D A ++F +M  NG   NV++YNTLI
Sbjct: 295 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 354

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + ++++  L+ EM  K + P  VTYNTL HGL  + +++ A+ LF EM      
Sbjct: 355 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI 414

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + +TY   +D LCK  ++ EA  L +T+     +  I+ Y+ +IDG+C+ G+LE A ++
Sbjct: 415 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL PNV TY IMI+G C  G +D+A+ LF++M+  G +P+  T+NT+  G ++
Sbjct: 475 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 534

Query: 243 NNETSKVVELLHRMDER 259
           N E  + ++LL  M  R
Sbjct: 535 NKEALRAIQLLQEMLAR 551



 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 142/254 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D MI  G +PN   Y TLI+G C  G  + A  L  SM+   C  +VV Y ++I
Sbjct: 155 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII 214

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ NL+S+M+ +GI P + TY +L H L  + + +H   L ++M +S + 
Sbjct: 215 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 274

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   ++T +D LCK G I EA ++   + +   E  +  Y+ L+DG C   +++ A ++
Sbjct: 275 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 334

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G  PNV++YN +I+G+C   +MDKA  LF +M  K + PN VT+NTLM G   
Sbjct: 335 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCH 394

Query: 243 NNETSKVVELLHRM 256
                  + L H M
Sbjct: 395 VGRLQDAIALFHEM 408



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 127/256 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  +++ G++P+   ++TLI G C+ G+I  A  LF  M   G   NVVTY TLIN
Sbjct: 121 AFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLIN 180

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK  +   ++ L   M     +P VV Y ++   L +  QV  A  LF +M    ++ 
Sbjct: 181 GLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 240

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY + I  LC          L   +   K    +  +S ++D LCK GK+  A ++ 
Sbjct: 241 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 300

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+ PNVVTYN ++ G C   +MD+A  +F  M   G APN +++NTL+ G  + 
Sbjct: 301 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 360

Query: 244 NETSKVVELLHRMDER 259
               K   L   M ++
Sbjct: 361 QRMDKATYLFEEMCQK 376



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 125/237 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D M+  G  PN   Y+TLI+G+C    +D+A  LF  M     + N VTYNT
Sbjct: 328 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 387

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C    +++++ L+ EM++ G  P + TY  L   L +   ++ A+ L   ++ S+
Sbjct: 388 LMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 447

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG+C+ G +  A ++F  L        +  Y+ +I+GLC+ G L+ A 
Sbjct: 448 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 507

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF  +   G  P+  TYN +  G   + +  +A  L  +M A+G + +  T   L+
Sbjct: 508 KLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 35/290 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M+ +G+ P+ F Y++LI   C   E      L   M  +  M +VV ++T++
Sbjct: 225 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 284

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   + E+ ++   M+ +G+ P VVTYN L  G     +++ A+K+FD M H+  A
Sbjct: 285 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 344

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               +YNT I+G CK   + +A  LF  +   +       Y+ L+ GLC +G+L+ A  L
Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIAL 404

Query: 183 FQSLPRVGLMPNVVTYNIM-----------------------------------IHGFCN 207
           F  +   G +P++ TY I+                                   I G C 
Sbjct: 405 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 464

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
            G+++ A D+F ++ +KG+ PN  T+  ++ G  R     +  +L   MD
Sbjct: 465 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P+   ++ L+     T +      L   MD  G   +V T N 
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C       + ++ +++L  G++P   T+ TL  GL    ++  AL LFD+M    
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GLCK G    A  L R++    C+  +  Y+ +ID LCK  ++  A+
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN--------------------------------- 207
            LF  +   G+ P++ TY  +IH  CN                                 
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 208 --DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +G++ +AHD+   M  +GV PN VT+N LM G    +E  + V++   M
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 74/170 (43%)

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +++N         + ++ AL  F+ M H      T  +N  +  + K         L   
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +        +   + LI+  C + +   A+ +   + ++GL P+  T+  +I G C +G+
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +  A  LF  M  +G  PN VT+ TL+ G  +   T+  + LL  M++ N
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 202


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  216 bits (551), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 104/254 (40%), Positives = 155/254 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MIQR + PN   Y++LI+GFC+   +D A+++F  M    C+ +VVTYNTLI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K V + + L+ +M  +G+    VTY TL HG F+    ++A  +F +M    V 
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT +DGLCKNG + +A  +F  L+  K E  I  Y+ + +G+CK GK+E  W+L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ P+V+ YN MI GFC  G  ++A+ LF+ M+  G  P+  T+NTL+   +R
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 568 DGDKAASAELIKEM 581



 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 141/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  M++R + PN   +++LID F   G++  A +LF  M       N+VTYN+LI
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+  +++ M+SK   P VVTYNTL +G  +  +V   ++LF +M    + 
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TY T I G  +      A  +F+ +        I  Y+ L+DGLCK GKLE A  +
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L +  + P++ TYNIM  G C  G+++   DLF  +  KGV P+ + +NT++ G  +
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532

Query: 243 NNETSKVVELLHRMDE 258
                +   L  +M E
Sbjct: 533 KGLKEEAYTLFIKMKE 548



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 142/283 (50%), Gaps = 35/283 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L++ M+ +G +P+   Y  +I+G C  GE D A  L   M+      +VV Y+T+I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
           +  CK + V+++LNL++EM +KGIRP V TY++L                          
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307

Query: 97  -----FHGLFEIHQVEHAL----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                F+ L +    E  L    KLFDEM    +     TYN+ I+G C +  + EA ++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +    C   +  Y+ LI+G CK  K+    ELF+ + R GL+ N VTY  +IHGF  
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
               D A  +F  M + GV PN +T+NTL+ G  +N +  K +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M++ G +P+   ++TL+ G     +   A  L   M + GC  ++VTY  
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  + + +LNL ++M    I   VV Y+T+   L +   V+ AL LF EM +  
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I  LC  G   +A+ L   +   K    +  ++ LID   K GKL  A 
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + +  + PN+VTYN +I+GFC   ++D+A  +F  M +K   P+ VT+NTL+ G 
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +    +EL   M  R
Sbjct: 391 CKAKKVVDGMELFRDMSRR 409



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 124/246 (50%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  N + Y+ +I+  C   ++  A  +   M   G   ++VT N+L+NG+C    + E+
Sbjct: 95  GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L  +M+  G +P  VT+ TL HGLF+ ++   A+ L + M       +  TY   I+G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G    A  L   +   K E  +  YS +ID LCK   ++ A  LF  +   G+ P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TY+ +I   CN G+   A  L  DM  + + PN VTFN+L+    +  +  +  +L  
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334

Query: 255 RMDERN 260
            M +R+
Sbjct: 335 EMIQRS 340



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 3/257 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+    ++L++GFC    I  A  L   M   G   + VT+ TL++
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G  +     E++ L   M+ KG +P +VTY  + +GL +  + + AL L ++M+   + A
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   Y+T ID LCK  ++ +A  LF  +        +  YS LI  LC  G+   A  L 
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI- 241
             +    + PNVVT+N +I  F  +G++ +A  LF +M  + + PN VT+N+L+ G C+ 
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358

Query: 242 -RNNETSKVVELLHRMD 257
            R +E  ++  L+   D
Sbjct: 359 DRLDEAQQIFTLMVSKD 375



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 85/169 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  +   M+  GV PN   Y+TL+DG C  G++++A  +F  +  +    ++ TYN +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
             G CK   VE+  +L+  +  KG++P V+ YNT+  G  +    E A  LF +M+    
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
             ++ TYNT I    ++G    +AEL + +R  +       Y  + D L
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 35/259 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M++    P+   +S L+       + D        M+I G  HN+ TYN 
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  C+   +  +L +  +M+  G  P++VT N+L +G    +++  A+ L D+M    
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T T+ T + GL ++    EA  L   + V                           
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVV--------------------------- 198

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                    G  P++VTY  +I+G C  G+ D A +L   ME   +  + V ++T++   
Sbjct: 199 --------KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250

Query: 241 IRNNETSKVVELLHRMDER 259
            +       + L   MD +
Sbjct: 251 CKYRHVDDALNLFTEMDNK 269



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 69/135 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + + +  + P+ + Y+ + +G C  G+++   +LF S+ + G   +V+ YNT
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+CK    EE+  L+ +M   G  P   TYNTL            + +L  EM+   
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585

Query: 121 VAAETSTYNTFIDGL 135
            A + STY    D L
Sbjct: 586 FAGDASTYGLVTDML 600


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  216 bits (549), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 105/257 (40%), Positives = 160/257 (62%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MIQRGV P+   Y+TL+DG CL  E+D A ++F  M   G   +V++Y TLI
Sbjct: 284 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 343

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +++++ L+ EM  K   P   TYNTL HGL  + +++ A+ LF EM      
Sbjct: 344 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +D LCKN ++ EA  L + +        I+ Y+ +IDG+C+ G+LE A +L
Sbjct: 404 PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 463

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL P+V TYNIMIHG C  G +++A+ LF++M+    +P+  T+NT+  G ++
Sbjct: 464 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 523

Query: 243 NNETSKVVELLHRMDER 259
           NNET + ++LL  M  R
Sbjct: 524 NNETLRAIQLLEEMLAR 540



 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 138/257 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D MI  G +PN   Y TLI+G C  G    A  L  SM+   C  +VV Y ++I
Sbjct: 144 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSII 203

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ NL+S+M+ +GI P + TY +L H L  + + +H   L ++M +S + 
Sbjct: 204 DSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKIL 263

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   ++T +D LCK G + EA E+   +     E  +  Y+ L+DG C   +++ A ++
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + R G  P+V++Y  +I+G+C   ++DKA  LF +M  K   P+  T+NTLM G   
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCH 383

Query: 243 NNETSKVVELLHRMDER 259
                  + L H M  R
Sbjct: 384 VGRLQDAIALFHEMVAR 400



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 130/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D+M+++G  P+   Y+TLI+G+C   +ID+A  LF  M     + +  TYNT
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C    +++++ L+ EM+++G  P +VTY+ L   L +   +E A+ L   ++ S+
Sbjct: 377 LMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASN 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  IDG+C+ G +  A +LF  L        +  Y+ +I GLCK G L  A 
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF  +      P+  TYN +  GF  + +  +A  L  +M A+G + +  T   L+
Sbjct: 497 KLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 130/257 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M+ +G+ P+ F Y++L+   C   E      L   M  +  + +VV ++T++
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   V E+  +   M+ +G+ P VVTY TL  G     +++ A+K+FD M     A
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y T I+G CK   I +A  LF  +   +     + Y+ L+ GLC +G+L+ A  L
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G MP++VTY+I++   C +  +++A  L   +EA  + P+   +N ++ G  R
Sbjct: 394 FHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 453

Query: 243 NNETSKVVELLHRMDER 259
             E     +L   +  +
Sbjct: 454 AGELEAARDLFSNLSSK 470



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 38/293 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + ++     P+   ++ L+              L   MD  G   NV T N 
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    V  + ++ +++L  G +P   T+ TL  GL    ++  AL LFD+M    
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GLCK G    A  L R++    C+  +  Y+ +ID LCK  ++  A+
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN--------------------------------- 207
            LF  +   G+ P++ TY  ++H  CN                                 
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 208 --DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVELLHR 255
             +G++ +AH++   M  +GV P+ VT+ TLM G C+++  +E  KV +++ R
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 76/180 (42%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           MLS  +     + N         + ++ AL  F+ + H         +   +  + K  +
Sbjct: 12  MLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKH 71

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
                 L   +        +   + LI+  C + ++  A+ +   + ++G  P+  T+  
Sbjct: 72  YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 131

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +I G C +G++ +A  LF  M  +G  PN VT+ TL+ G  +   TS  + LL  M++ N
Sbjct: 132 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 191


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 106/257 (41%), Positives = 159/257 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++D+M Q GV P+   Y+ LIDG CL  E+D A ++F  M   GC  NV +YNTLI
Sbjct: 302 QAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLI 361

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + +++++ L+ EM  + + P  VTYNTL HGL  + +++ A+ LF EM      
Sbjct: 362 NGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQI 421

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   +D LCKN ++ +A  L + +     +  I+ Y+ +IDG+C+ G+LE A +L
Sbjct: 422 PDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDL 481

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL PNV TYNIM HG C  G +D+A  LF++M+    + +  T+NT+  G +R
Sbjct: 482 FSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLR 541

Query: 243 NNETSKVVELLHRMDER 259
           NNETS+ ++LL  M  R
Sbjct: 542 NNETSRAIQLLEEMLAR 558



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D MI  G +P+  +Y+TLI+G C TG    A  L  SM+   C  +VV Y TLI
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK +   ++ NL+SEM++KGI P +VT N+L + L  + + +H   L +EM  S + 
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIM 281

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               +  T +D LCK G + +A ++   +     E  +  Y+ LIDG C   +++ A ++
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G  PNV +YN +I+G+C   +MDKA  LF +M  + + PN VT+NTL+ G   
Sbjct: 342 FDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCH 401

Query: 243 NNETSKVVELLHRM 256
                  + L   M
Sbjct: 402 VGRLQDAIALFREM 415



 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 139/252 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+ M+   + PNA   +T++D  C  G + +A ++   M  +G   +VVTY  LI+G+C
Sbjct: 271 LLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHC 330

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
              +++E++ ++  M+ KG  P V +YNTL +G  +I +++ A+ LF+EM    +   T 
Sbjct: 331 LRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTV 390

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT I GLC  G + +A  LFR +        +  Y  L+D LCK   L+ A  L +++
Sbjct: 391 TYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAI 450

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
               L P++  Y I+I G C  G+++ A DLF ++ +KG+ PN  T+N +  G  +    
Sbjct: 451 EGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLL 510

Query: 247 SKVVELLHRMDE 258
            +  +L   MDE
Sbjct: 511 DEATKLFMEMDE 522



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 135/244 (55%), Gaps = 1/244 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D+M+ +G  PN F Y+TLI+G+C    +D+A  LF  M     + N VTYNT
Sbjct: 335 MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    +++++ L+ EM++ G  P +VTY  L   L +   ++ A+ L   ++ S+
Sbjct: 395 LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG+C+ G + +A +LF  L     +  +  Y+ +  GLCK G L+ A 
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEAT 514

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +       +  TYN +  GF  + +  +A  L  +M A+G + + V+  TL++G 
Sbjct: 515 KLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCD-VSTTTLLVGM 573

Query: 241 IRNN 244
           + ++
Sbjct: 574 LSDD 577



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 111/237 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P+   ++ ++              L   MD  G  HNV T N 
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    V  + ++ +++L  G +P   ++ TL  GL    Q+  AL LFD+M    
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y T I+GLCK G+   A  L R++    C+  +  Y  LI  LCK  +   A+
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF  +   G+ PN+VT N +++  CN G+    + L  +M    + PN ++  T++
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV 291



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 3/242 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N +  + LI+ FC    ++ A  +   +   GC  +  ++ TLI G C    + E+
Sbjct: 104 GIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEA 163

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+L+ +M+ +G +P VV Y TL +GL +      A++L   M+  +   +   Y T I  
Sbjct: 164 LHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHS 223

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+    +A  LF  +        I   + L+  LC +G+ +    L   +    +MPN
Sbjct: 224 LCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPN 283

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
            ++   ++   C +G + +AHD+   M   GV P+ VT+  L+ G C+R+  +E  KV +
Sbjct: 284 AISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD 343

Query: 252 LL 253
           ++
Sbjct: 344 MM 345



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 86/199 (43%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N   + Y     ++++L+ ++ ML     P++V +  +   + ++ +    L L  +M 
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +     T N  I+  C    +  A  +   +  L C+    +++ LI GLC  G++ 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  LF  +   G  P+VV Y  +I+G C  G    A  L   ME     P+ V + TL+
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 238 LGCIRNNETSKVVELLHRM 256
               ++ + ++   L   M
Sbjct: 222 HSLCKDRQQTQAFNLFSEM 240



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 5/171 (2%)

Query: 95  TLFHGLFE-----IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
           +L H  F       + ++ AL  F+ M H         +   +  + K         L R
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 150 TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
            +        +   + LI+  C + ++  A+ +   + ++G  P+  ++  +I G C +G
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           Q+ +A  LF  M  +G  P+ V + TL+ G  +   TS  + LL  M++ N
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN 209


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/254 (41%), Positives = 149/254 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F YS+LI+GFC+   +D A+ +F  M    C  NVVTY+TLI
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK K VEE + L+ EM  +G+    VTY TL HG F+    ++A  +F +M    V 
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  +DGLCKNG + +A  +F  L+    E  I  Y+ +I+G+CK GK+E  WEL
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   G+ PNV+ YN MI GFC  G  ++A  L   M+  G  PN  T+NTL+   +R
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585

Query: 243 NNETSKVVELLHRM 256
           + +     EL+  M
Sbjct: 586 DGDREASAELIKEM 599



 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 143/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + PN   +S LID F   G++  A +L+  M       ++ TY++LI
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+ +++  M+SK   P VVTY+TL  G  +  +VE  ++LF EM    + 
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TY T I G  +      A  +F+ +  +     I  Y+ L+DGLCK GKL  A  +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L R  + P++ TYNIMI G C  G+++   +LF ++  KGV+PN + +NT++ G  R
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550

Query: 243 NNETSKVVELLHRMDE 258
                +   LL +M E
Sbjct: 551 KGSKEEADSLLKKMKE 566



 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 148/291 (50%), Gaps = 38/291 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+QRG +P+   Y T+++G C  G+ID A  L   M+      +VV YNT+I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
           +G CK K ++++LNL++EM +KGIRP V TY++L                          
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325

Query: 97  -----FHGLFEIHQVEHAL----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                F  L +    E  L    KL+DEM    +  +  TY++ I+G C +  + EA  +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +    C   +  YS LI G CK  ++E   ELF+ + + GL+ N VTY  +IHGF  
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK---VVELLHR 255
               D A  +F  M + GV PN +T+N L+ G  +N + +K   V E L R
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G +P+ F ++TLI G  L  +   A  L   M   GC  ++VTY T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ +L+L  +M    I   VV YNT+  GL +   ++ AL LF EM +  
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I  LC  G   +A+ L   +   K    +  +S LID   K GKL  A 
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++ TY+ +I+GFC   ++D+A  +F  M +K   PN VT++TL+ G 
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +EL   M +R
Sbjct: 409 CKAKRVEEGMELFREMSQR 427



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 129/246 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + YS  I+ FC   ++  A  +   M   G   ++VT ++L+NGYC +K + ++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L  +M+  G +P   T+ TL HGLF  ++   A+ L D+M       +  TY T ++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G I  A  L + +   K E  +  Y+ +IDGLCK   ++ A  LF  +   G+ P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TY+ +I   CN G+   A  L  DM  + + PN VTF+ L+   ++  +  +  +L  
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 255 RMDERN 260
            M +R+
Sbjct: 353 EMIKRS 358



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P+   ++ L+       + +    L   M   G  H++ TY+ 
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            IN +C+   +  +L + ++M+  G  P +VT ++L +G     ++  A+ L D+M    
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T T+ T I GL  +    EA  L   +    C+  +  Y  +++GLCK G ++ A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + + +  +  +VV YN +I G C    MD A +LF +M+ KG+ P+  T+++L + C
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL-ISC 302

Query: 241 IRN-NETSKVVELLHRMDERN 260
           + N    S    LL  M ER 
Sbjct: 303 LCNYGRWSDASRLLSDMIERK 323



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 16/223 (7%)

Query: 39  ARELFVSMDINGCMH--NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           A+ LFV  ++ G  +   V ++  L    C  +    +   Y E+L              
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR------------- 55

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
            + L +I +V+ A+ LF +M  S        +N  +  + K         L   ++ L  
Sbjct: 56  -NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
              +  YS  I+  C+  +L  A  +   + ++G  P++VT + +++G+C+  ++  A  
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L   M   G  P+  TF TL+ G   +N+ S+ V L+ +M +R
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/254 (41%), Positives = 154/254 (60%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F YS+LI+GFC+   +D A+ +F  M    C  NVVTYNTLI
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK K V+E + L+ EM  +G+    VTY TL HG F+  + ++A  +F +M    V 
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLC NG +  A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ PNVVTY  M+ GFC  G  ++A  LF +M+ +G  P+  T+NTL+   +R
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 584 DGDKAASAELIREM 597



 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 139/256 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + PN   +S LID F   G++  A +L+  M       ++ TY++LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+ +++  M+SK   P VVTYNTL  G  +  +V+  ++LF EM    + 
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TY T I G  +      A  +F+ +        I  YS L+DGLC  GK+ETA  +
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L R  + P++ TYNIMI G C  G+++   DLF  +  KGV PN VT+ T+M G  R
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548

Query: 243 NNETSKVVELLHRMDE 258
                +   L   M E
Sbjct: 549 KGLKEEADALFREMKE 564



 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 134/243 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+ +G +P+   Y  +++G C  G+ID A  L   M+       VV YNT+I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  C  K+V ++LNL++EM +KGIRP VVTYN+L   L    +   A +L  +M    + 
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  ID   K G +VEA +L+  +     +  I  YS LI+G C   +L+ A  +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +      PNVVTYN +I GFC   ++D+  +LF +M  +G+  N VT+ TL+ G  +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443

Query: 243 NNE 245
             E
Sbjct: 444 ARE 446



 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+  M++ G +P++F ++TLI G         A  L   M + GC  ++VTY  
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ +L+L  +M    I P VV YNT+   L     V  AL LF EM +  
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ I  LC  G   +A+ L   +   K    +  +S LID   K GKL  A 
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++ TY+ +I+GFC   ++D+A  +F  M +K   PN VT+NTL+ G 
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +EL   M +R
Sbjct: 407 CKAKRVDEGMELFREMSQR 425



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 127/246 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N + YS LI+ FC   ++  A  +   M   G   ++VT N+L+NG+C    + ++
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L  +M+  G +P   T+NTL HGLF  ++   A+ L D M       +  TY   ++G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G I  A  L + +   K E G+  Y+ +ID LC    +  A  LF  +   G+ PN
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTYN +I   CN G+   A  L  DM  + + PN VTF+ L+   ++  +  +  +L  
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350

Query: 255 RMDERN 260
            M +R+
Sbjct: 351 EMIKRS 356



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 129/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P+   +S L+       + D    L   M   G  HN+ TY+ 
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  +L + ++M+  G  P +VT N+L +G    +++  A+ L  +M    
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              ++ T+NT I GL ++    EA  L   + V  C+  +  Y  +++GLCK G ++ A 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + + +  + P VV YN +I   CN   ++ A +LF +M+ KG+ PN VT+N+L+   
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 241 IRNNETSKVVELLHRMDER 259
                 S    LL  M ER
Sbjct: 302 CNYGRWSDASRLLSDMIER 320



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 39/239 (16%)

Query: 19  NAFVYSTLI-DGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           N FV+ +L+  G C T     +   F   D +G  ++   Y  +         +++++NL
Sbjct: 12  NRFVHRSLLGKGKCGTAPPSFSHCSFWVRDFSGVRYD---YRKISINRLNDLKLDDAVNL 68

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M+     P++V ++ L   + ++++ +  + L ++MQ+               G+  
Sbjct: 69  FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL--------------GISH 114

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           N Y                      YS LI+  C+  +L  A  +   + ++G  P++VT
Sbjct: 115 NLY---------------------TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 153

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            N +++GFC+  ++  A  L   M   G  P+  TFNTL+ G  R+N  S+ V L+ RM
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 1/117 (0%)

Query: 12  IQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +QR  + P+ + Y+ +I+G C  G+++   +LF S+ + G   NVVTY T+++G+C+   
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            EE+  L+ EM  +G  P   TYNTL            + +L  EM+      + ST
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  214 bits (545), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 102/260 (39%), Positives = 164/260 (63%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA ++ +LMI++G  PN   Y++L++G CL  ++D A  LF  M   G   +V++YNT
Sbjct: 200 VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYC +   EE++ L+ +M  + + P++ TY  L   L++  ++  A +LF+ MQ   
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   +DGLCKNG I EA ++FR+L+ +K +  I  YS LI G+ +  + E+A 
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +P VGL+PN+VTYNIMI+G C +G++ +A  LF+ ME  G   + ++FN ++ G 
Sbjct: 380 EIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGF 439

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++ N+  K +E L RM E+N
Sbjct: 440 LQENQVQKAMEFLKRMREKN 459



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 134/255 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M + G + +  +Y  LI+    T +  RA EL   M    C  N  TY  +I
Sbjct: 27  DALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVI 86

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK     + L ++ EM++ GI P V+ Y++L +GL  + ++  A+ LFDEM    + 
Sbjct: 87  DSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIK 146

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN+ I   C+ G   EA   F  +        +  ++ LID L K GK++ A+++
Sbjct: 147 ANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKI 206

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ + + G  PN+VTYN +++G C   QMD A  LF  M  +G+  + +++NTL+ G   
Sbjct: 207 FELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCT 266

Query: 243 NNETSKVVELLHRMD 257
           + +T + + L  +M 
Sbjct: 267 SGKTEEAMTLFRKMQ 281



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 123/248 (49%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++ G +PN    STL+ G C  G++  A ELF  M  +G   +++ Y  LIN   KT+  
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
             ++ L+  MLS+       TY  +   L +       LK+F EM +  +      Y++ 
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+GLC+ G + EA  LF  +     +  +  Y+ LI   C+ G  + A   F  +   G+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +P+VVT+  +I      G++ +A+ +F  M  +G APN VT+N+L+ G   +++    V 
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 252 LLHRMDER 259
           L   M ER
Sbjct: 241 LFEVMVER 248



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 125/254 (49%), Gaps = 35/254 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE------------------------- 35
           MD A RL ++M++RG++ +   Y+TLI+G+C +G+                         
Sbjct: 235 MDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTI 294

Query: 36  ----------IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                     I  A+ELF +M I G   ++ TY  L++G CK   +EE+++++  + S  
Sbjct: 295 LLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIK 354

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +P++  Y+ L  G+F+  + E A+++FDE+    +     TYN  I+GLCK G ++EA 
Sbjct: 355 YKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAE 414

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            LF  +    CE    +++ +I G  +  +++ A E  + +      PN     ++++ +
Sbjct: 415 RLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLY 474

Query: 206 CNDGQMDKAHDLFL 219
             D Q  +  + FL
Sbjct: 475 AADAQSSELPNNFL 488


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  214 bits (545), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/254 (41%), Positives = 152/254 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F YS+LI+GFC+   +D A+ +F  M    C  NVVTYNTLI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK K VEE + L+ EM  +G+    VTYNTL  GLF+    + A K+F +M    V 
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLCK G + +A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ PNV+ Y  MI GFC  G  ++A  LF +M+  G  P+   +NTL+   +R
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLR 582

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 583 DGDKAASAELIKEM 596



 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 142/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + PN   +S LID F   G++  A +L+  M       ++ TY++LI
Sbjct: 308 DASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+ +++  M+SK   P VVTYNTL  G  +  +VE  ++LF EM    + 
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TYNT I GL + G    A ++F+ +        I  YS L+DGLCK GKLE A  +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L +  + P++ TYNIMI G C  G+++   DLF  +  KGV PN + + T++ G  R
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547

Query: 243 NNETSKVVELLHRMDE 258
                +   L   M E
Sbjct: 548 KGLKEEADALFREMKE 563



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 139/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+QRG +P+   Y  +++G C  G+ID A  L   M+      +VV YNT+I
Sbjct: 203 EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 262

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK K ++++  L+++M +KGIRP V TYN+L   L    +   A +L   M    + 
Sbjct: 263 DGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKIN 322

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  ID   K G +VEA +L+  +     +  I  YS LI+G C   +L+ A  +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +      PNVVTYN +I GFC   ++++  +LF +M  +G+  N VT+NTL+ G  +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442

Query: 243 NNETSKVVELLHRM 256
             +     ++  +M
Sbjct: 443 AGDCDMAQKIFKKM 456



 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G +P+   ++TLI G  L  +   A  L   M   GC  ++VTY  
Sbjct: 166 ISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGA 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ +L+L  +M    I   VV YNT+  GL +   ++ A  LF++M+   
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG 285

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ I  LC  G   +A+ L   +   K    +  +S LID   K GKL  A 
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAE 345

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++ TY+ +I+GFC   ++D+A  +F  M +K   PN VT+NTL+ G 
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +EL   M +R
Sbjct: 406 CKAKRVEEGMELFREMSQR 424



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 128/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + +LMI +   PN   Y+TLI GFC    ++   ELF  M   G + N VTYNT
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +  D + +  ++ +M+S G+ P ++TY+ L  GL +  ++E AL +F+ +Q S 
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+G+CK G + +  +LF +L +   +  +  Y+ +I G C+ G  E A 
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ +   G +P+   YN +I     DG    + +L  +M + G   +  T + ++
Sbjct: 556 ALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 129/250 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M +  +  +  +Y+T+IDG C    ID A  LF  M+  G   +V TYN+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C      ++  L S M+ + I P VVT++ L     +  ++  A KL+DEM    
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I+G C +  + EA  +F  +    C   +  Y+ LI G CK  ++E   
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF+ + + GL+ N VTYN +I G    G  D A  +F  M + GV P+ +T++ L+ G 
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475

Query: 241 IRNNETSKVV 250
            +  +  K +
Sbjct: 476 CKYGKLEKAL 485



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 7/260 (2%)

Query: 8   LDLMIQRGVRP-------NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            DL+I  G R        + + Y+ LI+ FC   ++  A  +   M   G   ++VT ++
Sbjct: 96  FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYC +K + +++ L  +M+  G +P  VT+NTL HGLF  ++   A+ L D+M    
Sbjct: 156 LLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG 215

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   ++GLCK G I  A  L + +   K E  +  Y+ +IDGLCK   ++ A+
Sbjct: 216 CQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAF 275

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G+ P+V TYN +I   CN G+   A  L  +M  + + PN VTF+ L+   
Sbjct: 276 ALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAF 335

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++  +  +  +L   M +R+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRS 355



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 4/145 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + + +  + P+ + Y+ +I+G C  G+++   +LF S+ + G   NV+ Y T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C+    EE+  L+ EM   G  P    YNTL            + +L  EM+   
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 121 VAAETSTYNTFI----DGLCKNGYI 141
              + ST +  I    DG  +  Y+
Sbjct: 601 FVGDASTISMVINMLHDGRLEKSYL 625



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 78/155 (50%)

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +++ A+ LF EM  S        +N  +  + K         L   ++ L+    + +Y+
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LI+  C+  +L  A  +   + ++G  P++VT + +++G+C+  ++  A  L   M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G  P+ VTFNTL+ G   +N+ S+ V L+ +M +R
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR 214


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 105/254 (41%), Positives = 153/254 (60%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MIQR + PN   Y++LI+GFC+   +D A+++F  M    C+ +VVTYNTLI
Sbjct: 344 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 403

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK K VEE + L+ EM  +G+    VTYNTL  GLF+    + A K+F +M    V 
Sbjct: 404 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 463

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLCK G + +A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 464 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDL 523

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ PNV+ Y  MI GFC  G  ++A  LF +M+  G  P+   +NTL+   +R
Sbjct: 524 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLR 583

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 584 DGDKAASAELIKEM 597



 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/256 (39%), Positives = 144/256 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + PN   +++LID F   G++  A +LF  M       N+VTYN+LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 368

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+  +++ M+SK   P VVTYNTL  G  +  +VE  ++LF EM    + 
Sbjct: 369 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 428

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TYNT I GL + G    A ++F+ +        I  YS L+DGLCK GKLE A  +
Sbjct: 429 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 488

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L +  + PN+ TYNIMI G C  G+++   DLF  +  KGV PN + + T++ G  R
Sbjct: 489 FEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 548

Query: 243 NNETSKVVELLHRMDE 258
                +   L   M E
Sbjct: 549 KGLKEEADALFREMKE 564



 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 144/254 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+ RG +P+ F Y T+++G C  G+ID A  L   M+      NVV YNT+I
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK K ++++ +L+++M +KGI+P V TYN+L   L    +   A +L  +M    + 
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N+ ID   K G ++EA +LF  +     +  I  Y+ LI+G C   +L+ A ++
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +     +P+VVTYN +I GFC   ++++  +LF +M  +G+  N VT+NTL+ G  +
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443

Query: 243 NNETSKVVELLHRM 256
             +     ++  +M
Sbjct: 444 AGDCDMAQKIFKKM 457



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 139/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M++ G +P+   ++TLI G  L  +   A  L   M   GC  ++ TY T
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ +L+L  +M    I   VV YNT+  GL +   ++ A  LF++M+   
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ I  LC  G   +A+ L   +   K    +  ++ LID   K GKL  A 
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + +  + PN+VTYN +I+GFC   ++D+A  +F  M +K   P+ VT+NTL+ G 
Sbjct: 347 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGF 406

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +EL   M +R
Sbjct: 407 CKAKRVEEGMELFREMSQR 425



 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 132/246 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N + YS L++ FC   ++  A  +   M   G   ++VT ++L+NGYC  K + E+
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 170

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L  +M+  G +P  VT+NTL HGLF  ++   A+ L D M       +  TY T ++G
Sbjct: 171 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 230

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G I  A  L + +   K E  +  Y+ +IDGLCK   ++ A++LF  +   G+ P+
Sbjct: 231 LCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 290

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYN +I   CN G+   A  L  DM  + + PN VTFN+L+    +  +  +  +L  
Sbjct: 291 VFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350

Query: 255 RMDERN 260
            M +R+
Sbjct: 351 EMIQRS 356



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 132/250 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M +  +  N  +Y+T+IDG C    +D A +LF  M+  G   +V TYN+
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C      ++  L S+M+ + I P VVT+N+L     +  ++  A KLFDEM    
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ I+G C +  + EA ++F  +    C   +  Y+ LI G CK  ++E   
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF+ + + GL+ N VTYN +I G    G  D A  +F  M + GV P+ +T++ L+ G 
Sbjct: 417 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476

Query: 241 IRNNETSKVV 250
            +  +  K +
Sbjct: 477 CKYGKLEKAL 486



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 127/237 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++  LM+ +   P+   Y+TLI GFC    ++   ELF  M   G + N VTYNT
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +  D + +  ++ +M+S G+ P ++TY+ L  GL +  ++E AL +F+ +Q S 
Sbjct: 437 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 496

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I+G+CK G + +  +LF +L +   +  +  Y+ +I G C+ G  E A 
Sbjct: 497 MEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 556

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ +   G +P+   YN +I     DG    + +L  +M + G   +  T + ++
Sbjct: 557 ALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 613



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 3/257 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+    S+L++G+C    I  A  L   M   G   + VT+NTLI+
Sbjct: 135 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIH 194

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G        E++ L   M+++G +P + TY T+ +GL +   ++ AL L  +M+   + A
Sbjct: 195 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 254

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YNT IDGLCK  ++ +A +LF  +     +  +  Y+ LI  LC  G+   A  L 
Sbjct: 255 NVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLL 314

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI- 241
             +    + PNVVT+N +I  F  +G++ +A  LF +M  + + PN VT+N+L+ G C+ 
Sbjct: 315 SDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 374

Query: 242 -RNNETSKVVELLHRMD 257
            R +E  ++  L+   D
Sbjct: 375 DRLDEAQQIFTLMVSKD 391



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P+   +S L+       + D    L   M   G  HN  TY+ 
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N +C+   +  +L +  +M+  G  P +VT ++L +G     ++  A+ L D+M    
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T T+NT I GL  +    EA  L   +    C+  +  Y  +++GLCK G ++ A 
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + + +  +  NVV YN +I G C    MD A DLF  ME KG+ P+  T+N+L + C
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL-ISC 300

Query: 241 IRN-NETSKVVELLHRMDERN 260
           + N    S    LL  M ER 
Sbjct: 301 LCNYGRWSDASRLLSDMIERK 321



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 4/145 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + + +  + PN + Y+ +I+G C  G+++   +LF S+ + G   NV+ Y T
Sbjct: 482 LEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 541

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C+    EE+  L+ EM   G  P    YNTL            + +L  EM+   
Sbjct: 542 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 601

Query: 121 VAAETSTYNTFI----DGLCKNGYI 141
              + ST +  I    DG  +  Y+
Sbjct: 602 FVGDASTISMVINMLHDGRLEKSYL 626


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  213 bits (542), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 105/254 (41%), Positives = 152/254 (59%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA +L D M++R + P+   YS+LI+GFC+   +D A+++F  M    C  +VVTYNTLI
Sbjct: 958  EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 1017

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             G+CK K VEE + ++ EM  +G+    VTYN L  GLF+    + A ++F EM    V 
Sbjct: 1018 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 1077

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                TYNT +DGLCKNG + +A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 1078 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 1137

Query: 183  FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            F +L   G+ P+VV YN MI GFC  G  ++A  LF +M+  G  PN   +NTL+   +R
Sbjct: 1138 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 1197

Query: 243  NNETSKVVELLHRM 256
            + +     EL+  M
Sbjct: 1198 DGDREASAELIKEM 1211



 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 137/232 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M++  + P+   YS+LI+G CL   ID A ++F  M   GC+ +VV+YNTLI
Sbjct: 381 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 440

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K VE+ + L+ EM  +G+    VTYNTL  G F+   V+ A + F +M    ++
Sbjct: 441 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 500

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GLC NG + +A  +F  ++  + +L I  Y+ +I G+CK GK+E AW L
Sbjct: 501 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 560

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           F SL   GL P++VTY  M+ G C  G + +   L+  M+ +G+  N  T +
Sbjct: 561 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 612



 Score =  182 bits (463), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 143/256 (55%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            +ASRLL  MI+R + P+ F +S LID F   G++  A +L+  M       ++VTY++LI
Sbjct: 923  DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 982

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            NG+C    ++E+  ++  M+SK   P VVTYNTL  G  +  +VE  +++F EM    + 
Sbjct: 983  NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 1042

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              T TYN  I GL + G    A E+F+ +        I  Y+ L+DGLCK GKLE A  +
Sbjct: 1043 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 1102

Query: 183  FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            F+ L R  + P + TYNIMI G C  G+++   DLF ++  KGV P+ V +NT++ G  R
Sbjct: 1103 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 1162

Query: 243  NNETSKVVELLHRMDE 258
                 +   L   M E
Sbjct: 1163 KGSKEEADALFKEMKE 1178



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G +P+   Y+ +ID  C T  ++ A + F  ++  G   NVVTY  
Sbjct: 274 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG C +    ++  L S+M+ K I P V+TY+ L     +  +V  A +LF+EM    
Sbjct: 334 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I+GLC +  I EA ++F  +    C   + +Y+ LI+G CK  ++E   
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ + + GL+ N VTYN +I GF   G +DKA + F  M+  G++P+  T+N L+ G 
Sbjct: 454 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513

Query: 241 IRNNETSKVVELLHRMDER 259
             N E  K + +   M +R
Sbjct: 514 CDNGELEKALVIFEDMQKR 532



 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 136/237 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+RLL  MI++ + PN   YS L+D F   G++  A+ELF  M       ++VTY++LI
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C    ++E+  ++  M+SKG    VV+YNTL +G  +  +VE  +KLF EM    + 
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           + T TYNT I G  + G + +A E F  +        I  Y+ L+ GLC  G+LE A  +
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F+ + +  +  ++VTY  +I G C  G++++A  LF  +  KG+ P+ VT+ T+M G
Sbjct: 526 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 582



 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 147/291 (50%), Gaps = 38/291 (13%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA  L+D M+ +G +P+   Y  +++G C  G+ D A  L   M+       V+ YNT+I
Sbjct: 818  EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
            +G CK K ++++LNL+ EM +KGIRP VVTY++L                          
Sbjct: 878  DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937

Query: 97   -----FHGLFEIHQVEHAL----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                 F  L +    E  L    KL+DEM    +     TY++ I+G C +  + EA ++
Sbjct: 938  PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997

Query: 148  FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
            F  +    C   +  Y+ LI G CK  ++E   E+F+ + + GL+ N VTYNI+I G   
Sbjct: 998  FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057

Query: 208  DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK---VVELLHR 255
             G  D A ++F +M + GV PN +T+NTL+ G  +N +  K   V E L R
Sbjct: 1058 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 1108



 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 135/254 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+     +L++GFC    +  A  L   M   G   ++V YN +I+
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CKTK V ++ + + E+  KGIRP VVTY  L +GL    +   A +L  +M    +  
Sbjct: 302 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 361

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY+  +D   KNG ++EA ELF  +  +  +  I  YS LI+GLC   +++ A ++F
Sbjct: 362 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 421

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G + +VV+YN +I+GFC   +++    LF +M  +G+  N VT+NTL+ G  + 
Sbjct: 422 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 481

Query: 244 NETSKVVELLHRMD 257
            +  K  E   +MD
Sbjct: 482 GDVDKAQEFFSQMD 495



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 136/259 (52%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + EA  L+D M   G +PN   ++TLI G  L  +   A  L   M   GC  ++VTY  
Sbjct: 781  ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 840

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++NG CK  D + + NL ++M    + P V+ YNT+  GL +   ++ AL LF EM+   
Sbjct: 841  VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 900

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +     TY++ I  LC  G   +A+ L   +   K    +  +S LID   K GKL  A 
Sbjct: 901  IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 960

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +L+  + +  + P++VTY+ +I+GFC   ++D+A  +F  M +K   P+ VT+NTL+ G 
Sbjct: 961  KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 1020

Query: 241  IRNNETSKVVELLHRMDER 259
             +     + +E+   M +R
Sbjct: 1021 CKYKRVEEGMEVFREMSQR 1039



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 129/246 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N + YS LI+ FC   ++  A  +   M   G   N+VT ++L+NGYC +K + E+
Sbjct: 725 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 784

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L  +M   G +P  VT+NTL HGLF  ++   A+ L D M       +  TY   ++G
Sbjct: 785 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 844

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G    A  L   +   K E G+  Y+ +IDGLCK   ++ A  LF+ +   G+ PN
Sbjct: 845 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 904

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTY+ +I   CN G+   A  L  DM  + + P+  TF+ L+   ++  +  +  +L  
Sbjct: 905 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 964

Query: 255 RMDERN 260
            M +R+
Sbjct: 965 EMVKRS 970



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 126/229 (55%), Gaps = 8/229 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ DLM+ +G   +   Y+TLI+GFC    ++   +LF  M   G + N VTYNT
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 473

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+ +  DV+++   +S+M   GI P + TYN L  GL +  ++E AL +F++MQ  +
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T I G+CK G + EA  LF +L +   +  I  Y+ ++ GLC  G L    
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L+  + + GLM N  T         +DG +  + +L   M + G AP+
Sbjct: 594 ALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCGYAPS 634



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P+   +S L+       + D    L   M   G  HN  TY+ 
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  +L +  +M+  G  P +VT ++L +G     ++  A+ L D+M  + 
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T T+NT I GL  +    EA  L   +    C+  +  Y  +++GLCK G  + A+
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + +  L P V+ YN +I G C    MD A +LF +ME KG+ PN VT+++L + C
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL-ISC 914

Query: 241 IRN-NETSKVVELLHRMDERN 260
           + N    S    LL  M ER 
Sbjct: 915 LCNYGRWSDASRLLSDMIERK 935



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 130/256 (50%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   ++ L+       + D    L   M++ G  +++ T+N 
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN +C    V  +L++  +ML  G  P  VT  +L +G    ++V  A+ L D+M    
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   YN  ID LCK   + +A + F+ +        +  Y+ L++GLC   +   A 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            L   + +  + PNV+TY+ ++  F  +G++ +A +LF +M    + P+ VT+++L+ G 
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 240 CI--RNNETSKVVELL 253
           C+  R +E +++ +L+
Sbjct: 409 CLHDRIDEANQMFDLM 424



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 112/222 (50%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           +++ A +LF  M  +    ++V +N L++   K K  +  ++L  +M   GIR  + T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + +      QV  AL +  +M       +  T  + ++G C+   + +A  L   +  +
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             +  I AY+ +ID LCK  ++  A++ F+ + R G+ PNVVTY  +++G CN  +   A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             L  DM  K + PN +T++ L+   ++N +  +  EL   M
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389



 Score = 44.3 bits (103), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 57/116 (49%)

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A +LF  +   +    I  ++ L+  + K+ K +    L + +  +G+  ++ T+NI+I
Sbjct: 171 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 230

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + FC   Q+  A  +   M   G  P+ VT  +L+ G  R N  S  V L+ +M E
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 286


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  213 bits (542), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 105/254 (41%), Positives = 152/254 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D M++R + P+   YS+LI+GFC+   +D A+++F  M    C  +VVTYNTLI
Sbjct: 139 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 198

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK K VEE + ++ EM  +G+    VTYN L  GLF+    + A ++F EM    V 
Sbjct: 199 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 258

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT +DGLCKNG + +A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 259 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 318

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   G+ P+VV YN MI GFC  G  ++A  LF +M+  G  PN   +NTL+   +R
Sbjct: 319 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 378

Query: 243 NNETSKVVELLHRM 256
           + +     EL+  M
Sbjct: 379 DGDREASAELIKEM 392



 Score =  182 bits (463), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 143/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + P+ F +S LID F   G++  A +L+  M       ++VTY++LI
Sbjct: 104 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 163

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+  ++  M+SK   P VVTYNTL  G  +  +VE  +++F EM    + 
Sbjct: 164 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 223

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TYN  I GL + G    A E+F+ +        I  Y+ L+DGLCK GKLE A  +
Sbjct: 224 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 283

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L R  + P + TYNIMI G C  G+++   DLF ++  KGV P+ V +NT++ G  R
Sbjct: 284 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 343

Query: 243 NNETSKVVELLHRMDE 258
                +   L   M E
Sbjct: 344 KGSKEEADALFKEMKE 359



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 145/287 (50%), Gaps = 38/287 (13%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L+D M+ +G +P+   Y  +++G C  G+ D A  L   M+       V+ YNT+I+G C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTL------------------------------ 96
           K K ++++LNL+ EM +KGIRP VVTY++L                              
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 97  -FHGLFEIHQVEHAL----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
            F  L +    E  L    KL+DEM    +     TY++ I+G C +  + EA ++F  +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
               C   +  Y+ LI G CK  ++E   E+F+ + + GL+ N VTYNI+I G    G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK---VVELLHR 255
           D A ++F +M + GV PN +T+NTL+ G  +N +  K   V E L R
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 289



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 116/218 (53%)

Query: 42  LFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
           L   M   GC  ++VTY  ++NG CK  D + + NL ++M    + P V+ YNT+  GL 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           +   ++ AL LF EM+   +     TY++ I  LC  G   +A+ L   +   K    + 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            +S LID   K GKL  A +L+  + +  + P++VTY+ +I+GFC   ++D+A  +F  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +K   P+ VT+NTL+ G  +     + +E+   M +R
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 220



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 75/151 (49%)

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + L D M       +  TY   ++GLCK G    A  L   +   K E G+  Y+ +IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK   ++ A  LF+ +   G+ PNVVTY+ +I   CN G+   A  L  DM  + + P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             TF+ L+   ++  +  +  +L   M +R+
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 151


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  213 bits (542), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 105/254 (41%), Positives = 152/254 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D M++R + P+   YS+LI+GFC+   +D A+++F  M    C  +VVTYNTLI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK K VEE + ++ EM  +G+    VTYN L  GLF+    + A ++F EM    V 
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT +DGLCKNG + +A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   G+ P+VV YN MI GFC  G  ++A  LF +M+  G  PN   +NTL+   +R
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583

Query: 243 NNETSKVVELLHRM 256
           + +     EL+  M
Sbjct: 584 DGDREASAELIKEM 597



 Score =  183 bits (464), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 143/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + P+ F +S LID F   G++  A +L+  M       ++VTY++LI
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+  ++  M+SK   P VVTYNTL  G  +  +VE  +++F EM    + 
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TYN  I GL + G    A E+F+ +        I  Y+ L+DGLCK GKLE A  +
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L R  + P + TYNIMI G C  G+++   DLF ++  KGV P+ V +NT++ G  R
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548

Query: 243 NNETSKVVELLHRMDE 258
                +   L   M E
Sbjct: 549 KGSKEEADALFKEMKE 564



 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 147/291 (50%), Gaps = 38/291 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+ +G +P+   Y  +++G C  G+ D A  L   M+       V+ YNT+I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
           +G CK K ++++LNL+ EM +KGIRP VVTY++L                          
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 97  -----FHGLFEIHQVEHAL----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                F  L +    E  L    KL+DEM    +     TY++ I+G C +  + EA ++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +    C   +  Y+ LI G CK  ++E   E+F+ + + GL+ N VTYNI+I G   
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK---VVELLHR 255
            G  D A ++F +M + GV PN +T+NTL+ G  +N +  K   V E L R
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M   G +PN   ++TLI G  L  +   A  L   M   GC  ++VTY  
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D + + NL ++M    + P V+ YNT+  GL +   ++ AL LF EM+   
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ I  LC  G   +A+ L   +   K    +  +S LID   K GKL  A 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++VTY+ +I+GFC   ++D+A  +F  M +K   P+ VT+NTL+ G 
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +E+   M +R
Sbjct: 407 CKYKRVEEGMEVFREMSQR 425



 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 129/246 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N + YS LI+ FC   ++  A  +   M   G   N+VT ++L+NGYC +K + E+
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L  +M   G +P  VT+NTL HGLF  ++   A+ L D M       +  TY   ++G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G    A  L   +   K E G+  Y+ +IDGLCK   ++ A  LF+ +   G+ PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTY+ +I   CN G+   A  L  DM  + + P+  TF+ L+   ++  +  +  +L  
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350

Query: 255 RMDERN 260
            M +R+
Sbjct: 351 EMVKRS 356



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P+   +S L+       + D    L   M   G  HN  TY+ 
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  +L +  +M+  G  P +VT ++L +G     ++  A+ L D+M  + 
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T T+NT I GL  +    EA  L   +    C+  +  Y  +++GLCK G  + A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + +  L P V+ YN +I G C    MD A +LF +ME KG+ PN VT+++L + C
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL-ISC 300

Query: 241 IRN-NETSKVVELLHRMDERN 260
           + N    S    LL  M ER 
Sbjct: 301 LCNYGRWSDASRLLSDMIERK 321


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  213 bits (541), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 104/258 (40%), Positives = 160/258 (62%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MIQRGV P+   Y+TL+DG CL  E+D A ++F  M   G   +V++Y TLI
Sbjct: 293 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 352

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +++++ L+ EM  K   P   TYNTL +GL  + +++ A+ LF EM      
Sbjct: 353 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +D LCKN ++ EA  L + +        I+ Y+ +IDG+C+ G+LE A +L
Sbjct: 413 PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 472

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL P+V TYNIMIHG C  G +++A+ LF++M+    +P+  T+NT+  G ++
Sbjct: 473 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 532

Query: 243 NNETSKVVELLHRMDERN 260
           NNET + ++LL  M  R 
Sbjct: 533 NNETLRAIQLLEEMLARG 550



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 139/260 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L D MI  G +PN   Y TLI+G C  G    A  L  SM+   C  +VV Y +
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + V E+ NL+S+M+ +GI P + TY +L H L  + + +H   L ++M +S 
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   ++T +D LCK G + EA E+   +     E  +  Y+ L+DG C   +++ A 
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 330

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  + R G  P+V++Y  +I+G+C   ++DKA  LF +M  K   P+  T+NTLM G 
Sbjct: 331 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGL 390

Query: 241 IRNNETSKVVELLHRMDERN 260
                    + L H M  R 
Sbjct: 391 CHVGRLQDAIALFHEMVARG 410



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 130/258 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M+ +G+ P+ F Y++L+   C   E      L   M  +  + +VV ++T++
Sbjct: 223 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 282

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   V E+  +   M+ +G+ P VVTY TL  G     +++ A+K+FD M     A
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y T I+G CK   I +A  LF  +   +     + Y+ L+ GLC +G+L+ A  L
Sbjct: 343 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIAL 402

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G MP++VTY+I++   C +  +++A  L   +EA  + P+   +N ++ G  R
Sbjct: 403 FHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 462

Query: 243 NNETSKVVELLHRMDERN 260
             E     +L   +  + 
Sbjct: 463 AGELEAARDLFSNLSSKG 480



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 38/293 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + ++     P+   ++ L+              L   MD  G   NV T N 
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    V  + ++ +++L  G +P   T+ TL  GL    ++  AL LFD+M    
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GLCK G    A  L R++    C+  +  Y+ +ID LCK  ++  A+
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN--------------------------------- 207
            LF  +   G+ P++ TY  ++H  CN                                 
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 208 --DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVELLHR 255
             +G++ +AH++   M  +GV P+ VT+ TLM G C+++  +E  KV +++ R
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  +    + P+  VY+ +IDG C  GE++ AR+LF ++   G   +V TYN 
Sbjct: 431 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 490

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   + E+  L+ EM      P   TYNT+  G  + ++   A++L +EM    
Sbjct: 491 MIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +A++      +       Y +   E F         LG E   C +  L KIG++  +
Sbjct: 551 FSADSCFLMLSVLSEDDRRYFIFIPEGFDL-------LGWEFMRCKLKELAKIGEVSKS 602



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 76/180 (42%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           MLS  +     + N         + ++ AL  F+ + H         +   +  + K  +
Sbjct: 21  MLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKH 80

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
                 L   +        +   + LI+  C + ++  A+ +   + ++G  P+  T+  
Sbjct: 81  YSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTT 140

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +I G C +G++ +A  LF  M  +G  PN VT+ TL+ G  +   TS  + LL  M++ N
Sbjct: 141 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN 200


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  212 bits (540), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 105/257 (40%), Positives = 160/257 (62%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MIQ GV P+   Y+ L+DG CL  E+D A ++F  M  NGC+ NVV+YNTLI
Sbjct: 249 EAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLI 308

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + +++++ L+ EM  + + P  +TY+TL HGL  + +++ A+ LF+EM      
Sbjct: 309 NGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQI 368

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  +D LCKN  + EA  L + +     +  ++ Y+  IDG+C+ G LE A +L
Sbjct: 369 PNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDL 428

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL P+V T+NIMI G C  G +D+A  LF +M+  G   N  T+NT+  G ++
Sbjct: 429 FSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQ 488

Query: 243 NNETSKVVELLHRMDER 259
           NN+TS+ ++LL  M  R
Sbjct: 489 NNKTSRAIQLLEEMLAR 505



 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 157/295 (53%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L  +++ G +P+   ++TL+ G C+ G+I  A ++F  M   G   NVVTY T
Sbjct: 107 VDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGT 166

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK + + E+LNL+SEM++KGI P + TYN+L H L  + + +H   L +EM  S 
Sbjct: 167 LMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSK 226

Query: 121 VAAETSTYNTFIDGLCKNGYIVEA-----------------------------AELFRTL 151
           +     + N  +D LCK G + EA                             +E+   +
Sbjct: 227 IMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAV 286

Query: 152 RVLK------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +V        C   + +Y+ LI+G CKI +++ A  LF+ + R  L+PN +TY+ +IHG 
Sbjct: 287 KVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGL 346

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C+ G++  A  LF +M A G  PN VT++ L+    +N+  ++ + LL  ++  N
Sbjct: 347 CHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSN 401



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D+M++ G   N   Y+TLI+G+C    ID+A  LF  M     + N +TY+T
Sbjct: 282 MDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYST 341

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    +++++ L++EM++ G  P +VTY+ L   L + H++  A+ L   ++ S+
Sbjct: 342 LIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSN 401

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  IDG+C+ G +  A +LF  L     +  +  ++ +I GLCK G L+ A 
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEAS 461

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +LF+ +   G + N  TYN +  G   + +  +A  L  +M A+G + +  T
Sbjct: 462 KLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVST 513



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 131/293 (44%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   MI +G+ P+ F Y++LI   C   E      L   M  +  M NVV+ N 
Sbjct: 177 LTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNI 236

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK   V E+ ++   M+  G+ P VVTY  L  G     +++ A+K+FD M  + 
Sbjct: 237 VVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YNT I+G CK   I +A  LF  +   +       YS LI GLC +G+L+ A 
Sbjct: 297 CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAI 356

Query: 181 ELFQSLPRVGLMPNVVT-----------------------------------YNIMIHGF 205
            LF  +   G +PN+VT                                   YNI I G 
Sbjct: 357 ALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C  G ++ A DLF ++  +G+ P+  T N ++ G  +     +  +L   MDE
Sbjct: 417 CRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDE 469



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M+     P  F ++ L+              L   MD  G   +V T   
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN +C    V+ +L++ +++L  G +P   T+ TL  GL  + ++  AL +FD+M    
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T ++GLCK+  + EA  LF  +        I  Y+ LI  LC + + +   
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            L   + +  +MPNVV+ NI++   C +G++ +AHD+   M   GV P+ VT+  LM G 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 240 CIRN--NETSKVVELLHR 255
           C+R+  +E  KV +++ R
Sbjct: 277 CLRSEMDEAVKVFDMMVR 294



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 100/209 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + M ++ + PN   YSTLI G C  G +  A  LF  M   G + N+VTY+ 
Sbjct: 317 IDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSI 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   + E++ L   +    + P V  YN    G+     +E A  LF  +    
Sbjct: 377 LLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  I GLCK G + EA++LFR +    C      Y+ +  GL +  K   A 
Sbjct: 437 LQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAI 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
           +L + +   G   +V T  +++    +DG
Sbjct: 497 QLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 10/214 (4%)

Query: 43  FVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           F+S   N      + +NTL          +++L+ +  ML     P +  +  L   + +
Sbjct: 19  FLSSSQNNFQSKSLHFNTL----------DDALSSFHRMLHMHPPPPIFEFAKLLTSIAK 68

Query: 103 IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
           +      L L  +M    +  +  T    I+  C    +  A  +   +  L  +     
Sbjct: 69  MKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTAT 128

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           ++ L+ GLC +GK+  A ++F  +   G  PNVVTY  +++G C D Q+ +A +LF +M 
Sbjct: 129 FTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMI 188

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           AKG++P+  T+N+L+       E   V  LL+ M
Sbjct: 189 AKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 222


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 103/256 (40%), Positives = 159/256 (62%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  ++D+MIQRGV P+   Y+ L+DG CL  E+D A ++F +M   GC  NV++Y+TLIN
Sbjct: 303 AHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLIN 362

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK + +++++ L+ EM  + + P +VTYNTL HGL  + ++  A+ LF EM  S    
Sbjct: 363 GYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIP 422

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY   +D LCK  ++ +A  + + +        I++Y+ +IDG+C++G+LE A +LF
Sbjct: 423 DLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLF 482

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            SL   GL P+V TY IMI+G C  G + +A  LF +M   G +P+  T+N +  G +RN
Sbjct: 483 SSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRN 542

Query: 244 NETSKVVELLHRMDER 259
           NET   ++LL  M  R
Sbjct: 543 NETLSAIQLLQEMLGR 558



 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/254 (36%), Positives = 140/254 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+  G +PN   Y TLI G C  G    A  L  SM    C  NV+TYNT+I
Sbjct: 162 EALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTII 221

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +   K + V E+LN++SEM++KGI P V TYN++ HGL +  + +H   L +EM  S + 
Sbjct: 222 DCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIM 281

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                + T +D LCK G +  A ++   +     E  +  Y+ L+DG C   +++ A ++
Sbjct: 282 PNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKV 341

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++ R G  PNV++Y+ +I+G+C   ++DKA  LF +M  + + PN VT+NTL+ G   
Sbjct: 342 FDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCH 401

Query: 243 NNETSKVVELLHRM 256
                  + L H M
Sbjct: 402 VGRLRDAIALFHEM 415



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    +L  + + G +P+   ++TLI G C+ G+I  A  LF  M   G   N VTY T
Sbjct: 125 VDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGT 184

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  +   ++ L   M+ K   P V+TYNT+   LF+  QV  AL +F EM    
Sbjct: 185 LIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKG 244

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++   STYN+ I GLCK       A L   +   K    +  ++ L+D LCK G +  A 
Sbjct: 245 ISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAH 304

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   + + G+ P+VVTY  ++ G C   +MD+A  +F  M  KG APN ++++TL+ G 
Sbjct: 305 DVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGY 364

Query: 241 IRNNETSKVVELLHRMDER 259
            +     K + L   M +R
Sbjct: 365 CKIQRIDKAMYLFEEMCQR 383



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 137/254 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D M+++G  PN   YSTLI+G+C    ID+A  LF  M     + N+VTYNT
Sbjct: 335 MDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNT 394

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    + +++ L+ EM++ G  P +VTY  L   L +   ++ A+ +   ++ S+
Sbjct: 395 LIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSN 454

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  +YN  IDG+C+ G +  A +LF +L        +  Y+ +I+GLC  G L  A 
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT 514

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G  P+  TYN++  GF  + +   A  L  +M  +G + +  T   ++   
Sbjct: 515 KLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574

Query: 241 IRNNETSKVVELLH 254
             +     V ++LH
Sbjct: 575 SDDGLDQSVKQILH 588



 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 138/253 (54%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           + L++ M+   + PN  +++TL+D  C  G +  A ++   M   G   +VVTY  L++G
Sbjct: 269 ATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDG 328

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +C   +++E+  ++  M+ KG  P V++Y+TL +G  +I +++ A+ LF+EM   ++   
Sbjct: 329 HCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPN 388

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             TYNT I GLC  G + +A  LF  +        +  Y  L+D LCK   L+ A  + +
Sbjct: 389 IVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK 448

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           ++    L P++ +YNI+I G C  G+++ A DLF  + +KG+ P+  T+  ++ G     
Sbjct: 449 AIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQG 508

Query: 245 ETSKVVELLHRMD 257
             ++  +L   M+
Sbjct: 509 LLAEATKLFREMN 521



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +   MI +G+ PN   Y+++I G C   E      L   M  +  M NVV + T
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTT 289

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   V  + ++   M+ +G+ P VVTY  L  G     +++ A K+FD M    
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A    +Y+T I+G CK   I +A  LF  +   +    I  Y+ LI GLC +G+L  A 
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAI 409

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G +P++VTY I++   C    +D+A  +   +E   +AP+  ++N ++ G 
Sbjct: 410 ALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGM 469

Query: 241 IRNNETSKVVELLHRMDER 259
            R  E     +L   +  +
Sbjct: 470 CRVGELEAAGDLFSSLSSK 488



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 3/244 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + +  + +I+ FC    +D    +   +   G   +  T+ TLI G C    + E+
Sbjct: 104 GIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEA 163

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+L+ +M+ +G +P  VTY TL HGL ++     A++L   M   +      TYNT ID 
Sbjct: 164 LHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDC 223

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L K+  + EA  +F  +        +  Y+ +I GLCK  + +    L   +    +MPN
Sbjct: 224 LFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPN 283

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
           VV +  ++   C +G +  AHD+   M  +GV P+ VT+  LM G C+R+  +E  KV +
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343

Query: 252 LLHR 255
            + R
Sbjct: 344 TMVR 347



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 105/237 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA    + M+     P+   ++ ++              L   MD  G   +V T   
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN +C    V+   ++ +++   G +P   T+ TL  GL    ++  AL LFD+M    
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I GLCK G    A  L R++    CE  +  Y+ +ID L K  ++  A 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +F  +   G+ PNV TYN +IHG C   +      L  +M    + PN V F TL+
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 69/155 (44%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           ++ AL  F+ M H         +   +  +    +      L + +  L     +   + 
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +I+  C + +++  + +   + ++G  P+  T+  +I G C +G++ +A  LF  M  +G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             PN VT+ TL+ G  +   +   + LL  M ++N
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKN 209


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  211 bits (536), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 107/257 (41%), Positives = 160/257 (62%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MI+RGV PN   Y+ L+DG CL  E+D A ++F +M   G   +VV+Y+TLI
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 355

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + +E+++ L+ EM  K + P  VTY+TL HGL  + +++ A+ LF EM      
Sbjct: 356 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y   +D LCKN  + EA  L + +     +  I+ Y+ +IDG+C+ G+LE A +L
Sbjct: 416 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 475

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL PNV TY IMI+G C  G + +A  LF +M+ KG +PN  T+N +  G +R
Sbjct: 476 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 535

Query: 243 NNETSKVVELLHRMDER 259
           NNET + ++LL  M  R
Sbjct: 536 NNETLRGIQLLQEMLAR 552



 Score =  173 bits (438), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 142/257 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   L D MI  G +PN   Y TLI+G C  G    A  L  SM+   C  +VV Y ++I
Sbjct: 156 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSII 215

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V ++ NL+SEM+ +GI P++ TYN+L H L  + + +H   L +EM +S + 
Sbjct: 216 DSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIM 275

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                ++T +D LCK G ++EA ++   +     E  +  Y+ L+DG C   +++ A ++
Sbjct: 276 PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKV 335

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G  P+VV+Y+ +I+G+C   +++KA  LF +M  K + PN VT++TLM G   
Sbjct: 336 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 395

Query: 243 NNETSKVVELLHRMDER 259
                  + L H M  R
Sbjct: 396 VGRLQDAIALFHEMVTR 412



 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 129/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D M+ +G  P+   YSTLI+G+C    I++A  LF  M     + N VTY+T
Sbjct: 329 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 388

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C    +++++ L+ EM+++G  P  V+Y  L   L +  +++ A+ L   ++ S+
Sbjct: 389 LMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 448

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG+C+ G +  A +LF  L        +  Y+ +I+GLC+ G L  A 
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 508

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF  + R G  PN  TYN++  GF  + +  +   L  +M A+G + +  T   L+
Sbjct: 509 KLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 565



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 3/242 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ PN +  + LI+ FC    +  A  +   +   G   N+ T+NTLI G C    + E 
Sbjct: 98  GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 157

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+L+ +M+ +G +P VVTY TL +GL ++     A++L   M+  +   +   Y + ID 
Sbjct: 158 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 217

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + +A  LF  +        I  Y+ LI  LC + + +    L   +    +MPN
Sbjct: 218 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 277

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
           VV ++ ++   C +G++ +AHD+   M  +GV PN VT+N LM G C+R+  +E  KV +
Sbjct: 278 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 337

Query: 252 LL 253
            +
Sbjct: 338 TM 339



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 72/139 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  +    + P+  +Y+ +IDG C  GE++ AR+LF ++   G   NV TY  
Sbjct: 434 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 493

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+   + E+  L+ EM  KG  P   TYN +  G    ++    ++L  EM    
Sbjct: 494 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 553

Query: 121 VAAETSTYNTFIDGLCKNG 139
            +A+ ST    ++ L  +G
Sbjct: 554 FSADVSTSTVLVEMLSDDG 572



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 35/235 (14%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEML---------------------------------- 82
           ++NT  +       ++++L+ ++ ML                                  
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 83  -SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            S GI P + T N L +    + ++  A  +  ++         +T+NT I GLC  G I
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            E   LF  +     +  +  Y  LI+GLCK+G    A  L +S+ +    P+VV Y  +
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           I   C D Q+ +A +LF +M  +G++P+  T+N+L+       E   V  LL+ M
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 269



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 81/174 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   M+ RG  P+   Y  L+D  C    +D A  L  +++ +    ++  Y  
Sbjct: 399 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 458

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C+  ++E + +L+S + SKG+ P V TY  + +GL +   +  A KLF EM+   
Sbjct: 459 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 518

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            +    TYN    G  +N   +   +L + +        +   + L++ L   G
Sbjct: 519 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 76/169 (44%)

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           ++NT        + ++ AL  F+ M H       + +   +  + K  +      L   +
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
                   I   + LI+  C + +L  A+ +   + ++G  PN+ T+N +I G C +G++
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +   LF  M  +G  PN VT+ TL+ G  +   TS  + LL  M++ N
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 203


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  211 bits (536), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 107/257 (41%), Positives = 160/257 (62%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MI+RGV PN   Y+ L+DG CL  E+D A ++F +M   G   +VV+Y+TLI
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 346

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + +E+++ L+ EM  K + P  VTY+TL HGL  + +++ A+ LF EM      
Sbjct: 347 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y   +D LCKN  + EA  L + +     +  I+ Y+ +IDG+C+ G+LE A +L
Sbjct: 407 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 466

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL PNV TY IMI+G C  G + +A  LF +M+ KG +PN  T+N +  G +R
Sbjct: 467 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 526

Query: 243 NNETSKVVELLHRMDER 259
           NNET + ++LL  M  R
Sbjct: 527 NNETLRGIQLLQEMLAR 543



 Score =  173 bits (438), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 142/257 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   L D MI  G +PN   Y TLI+G C  G    A  L  SM+   C  +VV Y ++I
Sbjct: 147 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSII 206

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V ++ NL+SEM+ +GI P++ TYN+L H L  + + +H   L +EM +S + 
Sbjct: 207 DSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIM 266

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                ++T +D LCK G ++EA ++   +     E  +  Y+ L+DG C   +++ A ++
Sbjct: 267 PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKV 326

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G  P+VV+Y+ +I+G+C   +++KA  LF +M  K + PN VT++TLM G   
Sbjct: 327 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 386

Query: 243 NNETSKVVELLHRMDER 259
                  + L H M  R
Sbjct: 387 VGRLQDAIALFHEMVTR 403



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 129/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D M+ +G  P+   YSTLI+G+C    I++A  LF  M     + N VTY+T
Sbjct: 320 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYST 379

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C    +++++ L+ EM+++G  P  V+Y  L   L +  +++ A+ L   ++ S+
Sbjct: 380 LMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 439

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG+C+ G +  A +LF  L        +  Y+ +I+GLC+ G L  A 
Sbjct: 440 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 499

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF  + R G  PN  TYN++  GF  + +  +   L  +M A+G + +  T   L+
Sbjct: 500 KLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 556



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 3/242 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ PN +  + LI+ FC    +  A  +   +   G   N+ T+NTLI G C    + E 
Sbjct: 89  GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 148

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+L+ +M+ +G +P VVTY TL +GL ++     A++L   M+  +   +   Y + ID 
Sbjct: 149 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 208

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + +A  LF  +        I  Y+ LI  LC + + +    L   +    +MPN
Sbjct: 209 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 268

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
           VV ++ ++   C +G++ +AHD+   M  +GV PN VT+N LM G C+R+  +E  KV +
Sbjct: 269 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 328

Query: 252 LL 253
            +
Sbjct: 329 TM 330



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 72/139 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  +    + P+  +Y+ +IDG C  GE++ AR+LF ++   G   NV TY  
Sbjct: 425 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+   + E+  L+ EM  KG  P   TYN +  G    ++    ++L  EM    
Sbjct: 485 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 544

Query: 121 VAAETSTYNTFIDGLCKNG 139
            +A+ ST    ++ L  +G
Sbjct: 545 FSADVSTSTVLVEMLSDDG 563



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 35/235 (14%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEML---------------------------------- 82
           ++NT  +       ++++L+ ++ ML                                  
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 83  -SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            S GI P + T N L +    + ++  A  +  ++         +T+NT I GLC  G I
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            E   LF  +     +  +  Y  LI+GLCK+G    A  L +S+ +    P+VV Y  +
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           I   C D Q+ +A +LF +M  +G++P+  T+N+L+       E   V  LL+ M
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 260



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 81/174 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   M+ RG  P+   Y  L+D  C    +D A  L  +++ +    ++  Y  
Sbjct: 390 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 449

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C+  ++E + +L+S + SKG+ P V TY  + +GL +   +  A KLF EM+   
Sbjct: 450 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 509

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            +    TYN    G  +N   +   +L + +        +   + L++ L   G
Sbjct: 510 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 76/169 (44%)

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           ++NT        + ++ AL  F+ M H       + +   +  + K  +      L   +
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
                   I   + LI+  C + +L  A+ +   + ++G  PN+ T+N +I G C +G++
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +   LF  M  +G  PN VT+ TL+ G  +   TS  + LL  M++ N
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 194


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  210 bits (535), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 103/254 (40%), Positives = 152/254 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D M++R + P+   YS+LI+GFC+   +D A+++F  M    C  +VV+Y+TLI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLI 403

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK K V+E + L+ EM  +G+    VTY TL  GLF+    + A ++F EM    V 
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVP 463

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT +DGLCKNG + +A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   G+ P+VV YN MI GFC  G  ++A  LF +M+  G  PN   +NTL+   +R
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583

Query: 243 NNETSKVVELLHRM 256
           + +     EL+  M
Sbjct: 584 DGDREASAELIKEM 597



 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 143/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + P+ F +S LID F   G++  A +L+  M       ++VTY++LI
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+  ++  M+SK   P VV+Y+TL  G  +  +V+  ++LF EM    + 
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLV 428

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TY T I GL + G    A E+F+ +        I  Y+ L+DGLCK GKLE A  +
Sbjct: 429 GNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L R  + P + TYNIMI G C  G+++   DLF ++  KGV P+ V +NT++ G  R
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548

Query: 243 NNETSKVVELLHRMDE 258
                +   L   M E
Sbjct: 549 KGSKEEADALFKEMKE 564



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 137/257 (53%), Gaps = 3/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  LL+ M Q  + P   +Y+T+IDG C    +D A  LF  M+  G   NVVTY++L
Sbjct: 238 DLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSL 297

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  C      ++  L S+M+ + I P V T++ L     +  ++  A KL+DEM    +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY++ I+G C +  + EA ++F  +    C   + +YS LI G CK  +++   E
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME 417

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+ + + GL+ N VTY  +I G    G  D A ++F +M + GV PN +T+NTL+ G  
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 242 RNNETSK---VVELLHR 255
           +N +  K   V E L R
Sbjct: 478 KNGKLEKAMVVFEYLQR 494



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++ + M+ +   P+   YSTLI GFC    +D   ELF  M   G + N VTY T
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +  D + +  ++ EM+S G+ P ++TYNTL  GL +  ++E A+ +F+ +Q S 
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I+G+CK G + +  +LF  L +   +  + AY+ +I G C+ G  E A 
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            LF+ +   G +PN   YN +I     DG  + + +L  +M + G A +  T
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 129/246 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N + YS LI+ FC   ++  A  +   M   G   N+VT ++L+NGYC +K + E+
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L  +M   G +P  VT+NTL HGLF  ++   A+ L D M       +  TY   ++G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNG 230

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G    A  L   +   K E G+  Y+ +IDGLCK   ++ A  LF+ +   G+ PN
Sbjct: 231 LCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPN 290

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTY+ +I   CN G+   A  L  DM  + + P+  TF+ L+   ++  +  +  +L  
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350

Query: 255 RMDERN 260
            M +R+
Sbjct: 351 EMVKRS 356



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M   G +PN   ++TLI G  L  +   A  L   M   GC  ++VTY  
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGV 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D + +  L ++M    + P V+ Y T+  GL +   ++ AL LF EM+   
Sbjct: 227 VVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ I  LC  G   +A+ L   +   K    +  +S LID   K GKL  A 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++VTY+ +I+GFC   ++D+A  +F  M +K   P+ V+++TL+ G 
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGF 406

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +EL   M +R
Sbjct: 407 CKAKRVDEGMELFREMSQR 425



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P+   +S L+       + D    L   M   G  HN  TY+ 
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  +L +  +M+  G  P +VT ++L +G     ++  A+ L D+M  + 
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T T+NT I GL  +    EA  L   +    C+  +  Y  +++GLCK G  + A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + +  L P V+ Y  +I G C +  MD A +LF +ME KG+ PN VT+++L + C
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSL-ISC 300

Query: 241 IRN-NETSKVVELLHRMDERN 260
           + N    S    LL  M ER 
Sbjct: 301 LCNYGRWSDASRLLSDMIERK 321


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 104/257 (40%), Positives = 160/257 (62%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  ++D+MI RGV PN   Y+ L+DG CL  E+D A ++F +M  NG   NV++YNTLI
Sbjct: 297 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + ++++  L+ EM  K + P  VTYNTL H    + +++ A+ LF EM      
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQI 415

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + +TY   +D LCK  ++ EA  L +T+     +  I+ Y+ +IDG+C+ G+LE A ++
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL PNV TY IMI+G C  G +D+A+ LF++M+  G +P+  T+NT+  G ++
Sbjct: 476 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535

Query: 243 NNETSKVVELLHRMDER 259
           N E  + ++LL  M  R
Sbjct: 536 NKEALRAIQLLQEMLAR 552



 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 142/254 (55%), Gaps = 1/254 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D MI  G +PN   Y TLI+G C  G  + A  L  SM+   C  +VV Y ++I
Sbjct: 157 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII 216

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ NL+S+M+ +GI P + TY +L H L  + + +H   L ++M +S + 
Sbjct: 217 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 276

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   ++T +D LCK G I EA ++   + +   E  +  Y+ L+DG C   +++ A ++
Sbjct: 277 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 336

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G  PNV++YN +I+G+C   +MDKA  LF +M  K + PN VT+NTLM  C  
Sbjct: 337 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-H 395

Query: 243 NNETSKVVELLHRM 256
                  + L H M
Sbjct: 396 VGRLQDAIALFHEM 409



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D M+  G  PN   Y+TLI+G+C    +D+A  LF  M     + N VTYNT
Sbjct: 330 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 389

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  C    +++++ L+ EM++ G  P + TY  L   L +   ++ A+ L   ++ S+
Sbjct: 390 LMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 448

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG+C+ G +  A ++F  L        +  Y+ +I+GLC+ G L+ A 
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 508

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF  +   G  P+  TYN +  G   + +  +A  L  +M A+G + +  T   L+
Sbjct: 509 KLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P+   ++ L+     T +      L   MD  G   +V T N 
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    +  + ++ +++L  G +P   T+ TL  GL    ++  AL LFD+M    
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GLCK G    A  L R++    C+  +  Y+ +ID LCK  ++  A+
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN--------------------------------- 207
            LF  +   G+ P++ TY  +IH  CN                                 
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 208 --DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +G++ +AHD+   M  +GV PN VT+N LM G    +E  + V++   M
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 75/138 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  +    + P+  +Y+ +IDG C  GE++ AR++F ++   G   NV TY  
Sbjct: 434 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 493

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+   ++E+  L+ EM   G  P   TYNT+  GL +  +   A++L  EM    
Sbjct: 494 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 553

Query: 121 VAAETSTYNTFIDGLCKN 138
            +A+ ST    ++ LC +
Sbjct: 554 FSADVSTTTLLVEMLCDD 571



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 85/171 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   M+  G  P+   Y  L+D  C    +D A  L  +++ +    ++  Y  
Sbjct: 399 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 458

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C+  ++E + +++S + SKG+RP V TY  + +GL     ++ A KLF EM  + 
Sbjct: 459 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 518

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
            + +  TYNT   GL +N   + A +L + +        +   + L++ LC
Sbjct: 519 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 74/170 (43%)

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +++N         + ++ AL  F+ M H      T  +N  +  + K         L   
Sbjct: 35  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 94

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +        +   + LI+  C + +L  A+ +   + ++G  P+  T+  +I G C +G+
Sbjct: 95  MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +  A  LF  M  +G  PN VT+ TL+ G  +   T+  + LL  M++ N
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 204


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 156/254 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F Y++L++GFC+   +D+A+++F  M    C  +VVTYNTLI
Sbjct: 310 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK+K VE+   L+ EM  +G+    VTY TL  GLF     ++A K+F +M    V 
Sbjct: 370 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 429

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLC NG + +A E+F  ++  + +L I  Y+ +I+G+CK GK++  W+L
Sbjct: 430 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 489

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ PNVVTYN MI G C+   + +A+ L   M+  G  PN  T+NTL+   +R
Sbjct: 490 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 549

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 550 DGDKAASAELIREM 563



 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 138/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +AS+LL  MI++ + PN   ++ LID F   G+   A +L+  M       ++ TYN+L+
Sbjct: 275 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 334

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++++  ++  M+SK   P VVTYNTL  G  +  +VE   +LF EM H  + 
Sbjct: 335 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 394

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TY T I GL  +G    A ++F+ +        I  YS L+DGLC  GKLE A E+
Sbjct: 395 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 454

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + +  +  ++  Y  MI G C  G++D   DLF  +  KGV PN VT+NT++ G   
Sbjct: 455 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 514

Query: 243 NNETSKVVELLHRMDE 258
                +   LL +M E
Sbjct: 515 KRLLQEAYALLKKMKE 530



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+QRG +PN   Y  +++G C  G+ D A  L   M+      +VV +NT+I
Sbjct: 170 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 229

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V+++LNL+ EM +KGIRP VVTY++L   L    +   A +L  +M    + 
Sbjct: 230 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 289

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  ID   K G  VEA +L+  +     +  I  Y+ L++G C   +L+ A ++
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 349

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +      P+VVTYN +I GFC   +++   +LF +M  +G+  + VT+ TL+ G   
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409

Query: 243 NNETSKVVELLHRM 256
           + +     ++  +M
Sbjct: 410 DGDCDNAQKVFKQM 423



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G RP+   ++TLI G  L  +   A  L   M   GC  N+VTY  
Sbjct: 133 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 192

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D + +LNL ++M +  I   VV +NT+   L +   V+ AL LF EM+   
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ I  LC  G   +A++L   +   K    +  ++ LID   K GK   A 
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 312

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++ TYN +++GFC   ++DKA  +F  M +K   P+ VT+NTL+ G 
Sbjct: 313 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 372

Query: 241 IRNNETSKVVELLHRMDER 259
            ++       EL   M  R
Sbjct: 373 CKSKRVEDGTELFREMSHR 391



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 122/223 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++ + M+ +   P+   Y+TLI GFC +  ++   ELF  M   G + + VTY T
Sbjct: 343 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 402

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G     D + +  ++ +M+S G+ P ++TY+ L  GL    ++E AL++FD MQ S+
Sbjct: 403 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 462

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y T I+G+CK G + +  +LF +L +   +  +  Y+ +I GLC    L+ A+
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
            L + +   G +PN  TYN +I     DG    + +L  +M +
Sbjct: 523 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 565



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 123/240 (51%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           + Y+ LI+ FC   +I  A  L   M   G   ++VT ++L+NGYC  K + +++ L  +
Sbjct: 83  YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 142

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M+  G RP  +T+ TL HGLF  ++   A+ L D M          TY   ++GLCK G 
Sbjct: 143 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 202

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
              A  L   +   K E  +  ++ +ID LCK   ++ A  LF+ +   G+ PNVVTY+ 
Sbjct: 203 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 262

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +I   C+ G+   A  L  DM  K + PN VTFN L+   ++  +  +  +L   M +R+
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 130/257 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M++ G  P+    S+L++G+C    I  A  L   M   G   + +T+ TLI+
Sbjct: 101 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 160

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G        E++ L   M+ +G +P +VTY  + +GL +    + AL L ++M+ + + A
Sbjct: 161 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 220

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   +NT ID LCK  ++ +A  LF+ +        +  YS LI  LC  G+   A +L 
Sbjct: 221 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 280

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +    + PN+VT+N +I  F  +G+  +A  L+ DM  + + P+  T+N+L+ G   +
Sbjct: 281 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 340

Query: 244 NETSKVVELLHRMDERN 260
           +   K  ++   M  ++
Sbjct: 341 DRLDKAKQMFEFMVSKD 357



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 90/187 (48%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +++++ L+  M+     P++V +N L   + ++ + +  + L ++MQ  ++     TYN 
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+  C+   I  A  L   +  L  E  I   S L++G C   ++  A  L   +  +G
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+ +T+  +IHG     +  +A  L   M  +G  PN VT+  ++ G  +  +T   +
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 251 ELLHRMD 257
            LL++M+
Sbjct: 208 NLLNKME 214



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 68/127 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M +  ++ + ++Y+T+I+G C  G++D   +LF S+ + G   NVVTYNT
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C  + ++E+  L  +M   G  P   TYNTL            + +L  EM+   
Sbjct: 508 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 567

Query: 121 VAAETST 127
              + ST
Sbjct: 568 FVGDAST 574



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 1/164 (0%)

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L +GL ++ +++ A+ LF  M  S        +N  +  + K         L   ++ L+
Sbjct: 19  LRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 77

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
              G+  Y+ LI+  C+  ++  A  L   + ++G  P++VT + +++G+C+  ++  A 
Sbjct: 78  IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 137

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            L   M   G  P+ +TF TL+ G   +N+ S+ V L+ RM +R
Sbjct: 138 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 181


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 156/254 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F Y++L++GFC+   +D+A+++F  M    C  +VVTYNTLI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK+K VE+   L+ EM  +G+    VTY TL  GLF     ++A K+F +M    V 
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLC NG + +A E+F  ++  + +L I  Y+ +I+G+CK GK++  W+L
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ PNVVTYN MI G C+   + +A+ L   M+  G  PN  T+NTL+   +R
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 588 DGDKAASAELIREM 601



 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 138/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +AS+LL  MI++ + PN   ++ LID F   G+   A +L+  M       ++ TYN+L+
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++++  ++  M+SK   P VVTYNTL  G  +  +VE   +LF EM H  + 
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TY T I GL  +G    A ++F+ +        I  YS L+DGLC  GKLE A E+
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + +  +  ++  Y  MI G C  G++D   DLF  +  KGV PN VT+NT++ G   
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552

Query: 243 NNETSKVVELLHRMDE 258
                +   LL +M E
Sbjct: 553 KRLLQEAYALLKKMKE 568



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+QRG +PN   Y  +++G C  G+ D A  L   M+      +VV +NT+I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V+++LNL+ EM +KGIRP VVTY++L   L    +   A +L  +M    + 
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  ID   K G  VEA +L+  +     +  I  Y+ L++G C   +L+ A ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +      P+VVTYN +I GFC   +++   +LF +M  +G+  + VT+ TL+ G   
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447

Query: 243 NNETSKVVELLHRM 256
           + +     ++  +M
Sbjct: 448 DGDCDNAQKVFKQM 461



 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G RP+   ++TLI G  L  +   A  L   M   GC  N+VTY  
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D + +LNL ++M +  I   VV +NT+   L +   V+ AL LF EM+   
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ I  LC  G   +A++L   +   K    +  ++ LID   K GK   A 
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++ TYN +++GFC   ++DKA  +F  M +K   P+ VT+NTL+ G 
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410

Query: 241 IRNNETSKVVELLHRMDER 259
            ++       EL   M  R
Sbjct: 411 CKSKRVEDGTELFREMSHR 429



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 122/223 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++ + M+ +   P+   Y+TLI GFC +  ++   ELF  M   G + + VTY T
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G     D + +  ++ +M+S G+ P ++TY+ L  GL    ++E AL++FD MQ S+
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y T I+G+CK G + +  +LF +L +   +  +  Y+ +I GLC    L+ A+
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
            L + +   G +PN  TYN +I     DG    + +L  +M +
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 123/240 (51%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           + Y+ LI+ FC   +I  A  L   M   G   ++VT ++L+NGYC  K + +++ L  +
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M+  G RP  +T+ TL HGLF  ++   A+ L D M          TY   ++GLCK G 
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
              A  L   +   K E  +  ++ +ID LCK   ++ A  LF+ +   G+ PNVVTY+ 
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +I   C+ G+   A  L  DM  K + PN VTFN L+   ++  +  +  +L   M +R+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 130/257 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M++ G  P+    S+L++G+C    I  A  L   M   G   + +T+ TLI+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G        E++ L   M+ +G +P +VTY  + +GL +    + AL L ++M+ + + A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   +NT ID LCK  ++ +A  LF+ +        +  YS LI  LC  G+   A +L 
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +    + PN+VT+N +I  F  +G+  +A  L+ DM  + + P+  T+N+L+ G   +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378

Query: 244 NETSKVVELLHRMDERN 260
           +   K  ++   M  ++
Sbjct: 379 DRLDKAKQMFEFMVSKD 395



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 90/187 (48%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +++++ L+  M+     P++V +N L   + ++ + +  + L ++MQ  ++     TYN 
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+  C+   I  A  L   +  L  E  I   S L++G C   ++  A  L   +  +G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+ +T+  +IHG     +  +A  L   M  +G  PN VT+  ++ G  +  +T   +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 251 ELLHRMD 257
            LL++M+
Sbjct: 246 NLLNKME 252



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 68/127 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M +  ++ + ++Y+T+I+G C  G++D   +LF S+ + G   NVVTYNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C  + ++E+  L  +M   G  P   TYNTL            + +L  EM+   
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605

Query: 121 VAAETST 127
              + ST
Sbjct: 606 FVGDAST 612



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 1/164 (0%)

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L +GL ++ +++ A+ LF  M  S        +N  +  + K         L   ++ L+
Sbjct: 57  LRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
              G+  Y+ LI+  C+  ++  A  L   + ++G  P++VT + +++G+C+  ++  A 
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            L   M   G  P+ +TF TL+ G   +N+ S+ V L+ RM +R
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 103/253 (40%), Positives = 157/253 (62%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  ++D+MI+RGV P+   Y+ L+DG CL  E+D A ++F +M   GC+ NV +YN LIN
Sbjct: 379 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 438

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+ + +++++ L  +M  +G+    VTYNTL HGL  + +++HA+ LF EM  S    
Sbjct: 439 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 498

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY   +D LCKN ++ EA  L + +     +  I  Y+  IDG+C+ G+LE A +LF
Sbjct: 499 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 558

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            +L   GL P+V TYNIMIHG C  G +D+A+ LF  M+  G + +   +NT++ G +R+
Sbjct: 559 SNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRS 618

Query: 244 NETSKVVELLHRM 256
           NET    +LL  M
Sbjct: 619 NETFGATQLLQEM 631



 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D  I  G +P+   Y TL++G C  G    A  L  SM    C  NV+ YNT+I
Sbjct: 238 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 297

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ NL+SEM++KGI P + TYN+L H L  + + +H   L +EM +S + 
Sbjct: 298 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 357

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                ++T +D LCK G I  A ++   +     E  +  Y+ L+DG C   +++ A ++
Sbjct: 358 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 417

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G +PNV +YNI+I+G+C   +MDKA  L   M  +G+  + VT+NTL+ G   
Sbjct: 418 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 477

Query: 243 NNETSKVVELLHRM 256
                  + L H M
Sbjct: 478 VGRLQHAIALFHEM 491



 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 138/254 (54%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           + LL+ M+   + PN  V+ST++D  C  G I  A ++   M   G   +VVTY  L++G
Sbjct: 345 TTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 404

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +C   +++E++ ++  M+ KG  P V +YN L +G  +I +++ A+ L ++M    + A+
Sbjct: 405 HCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 464

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           T TYNT I GLC  G +  A  LF  +        +  Y  L+D LCK   L  A  L +
Sbjct: 465 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 524

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           ++    L  +++ YNI I G C  G+++ A DLF ++ +KG+ P+  T+N ++ G  +  
Sbjct: 525 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRG 584

Query: 245 ETSKVVELLHRMDE 258
              +  +L  +MDE
Sbjct: 585 LLDEANKLFRKMDE 598



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 125/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D M+ +G  PN   Y+ LI+G+C    +D+A  L   M + G + + VTYNT
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 470

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++ ++ L+ EM++ G  P +VTY  L   L + H +  A+ L   ++ S+
Sbjct: 471 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 530

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+   YN  IDG+C+ G +  A +LF  L     +  +  Y+ +I GLCK G L+ A 
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +LF+ +   G   +   YN +I GF    +   A  L  +M A+G + +  T
Sbjct: 591 KLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVST 642



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 132/262 (50%), Gaps = 7/262 (2%)

Query: 1   MDEASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           M   S +L L  Q    G+ P+ +  + LI+ FC    +  A  +   +   GC  +  T
Sbjct: 163 MKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTT 222

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +NTLI G C    + E+L+L+ + + +G +P VVTY TL +GL ++     A++L   M 
Sbjct: 223 FNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMV 282

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             +       YNT ID LCK+  + EA  LF  +        I  Y+ LI  LC + + +
Sbjct: 283 QKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWK 342

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               L   +    +MPNVV ++ ++   C +G +  AHD+   M  +GV P+ VT+  LM
Sbjct: 343 HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 402

Query: 238 LG-CIRN--NETSKVVE-LLHR 255
            G C+R+  +E  KV + ++H+
Sbjct: 403 DGHCLRSEMDEAVKVFDTMVHK 424



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 113/237 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P+   ++ L+              L   MD  G   +V T N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C  + +  + ++ +++L  G +P   T+NTL  GL    ++  AL LFD+     
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T ++GLCK G    A  L R++    C   + AY+ +ID LCK  ++  A+
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF  +   G+ P++ TYN +IH  CN  +      L  +M    + PN V F+T++
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 81/186 (43%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++L+ ++ ML     P+ V +  L   + ++      L L  +M    +  +  T N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+  C    +  A  +   L  L C+     ++ LI GLC  GK+  A  LF      G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+VVTY  +++G C  G    A  L   M  K   PN + +NT++    ++ + ++  
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 251 ELLHRM 256
            L   M
Sbjct: 311 NLFSEM 316



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 70/155 (45%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           ++ AL  F+ M H      T  +   +  + K  +      L   +        +   + 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI+  C + +L  A+ +   L ++G  P+  T+N +I G C +G++ +A  LF     +G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             P+ VT+ TLM G  +   TS  + LL  M ++N
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN 285


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  207 bits (527), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 107/278 (38%), Positives = 160/278 (57%), Gaps = 19/278 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA-------------------RE 41
           MDEA ++ D M+ +G  PN   Y+TLI+G+C    ID+A                    +
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVK 381

Query: 42  LFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
           +F +M   GCM NV++YNTLINGYCK + +++++ L+ EM  + + P  VTY+TL HGL 
Sbjct: 382 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
            + +++ A+ LF EM          TY   +D LCKN Y+ EA  L + +     +  I+
Sbjct: 442 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 501

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             +  IDG+C+ G+LE A +LF +L   GL P+V TY+IMI+G C  G +D+A  LF +M
Sbjct: 502 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +  G   N   +NT+  G +RNNETS+ ++LL  M  R
Sbjct: 562 DENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 599



 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 144/273 (52%), Gaps = 19/273 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D MI  G RP+   Y TLI+G C  G    A  L  SM    C  NV  YNT+I
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 208

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ NL+SEM++KGI P + TYN+L H L  + + +H   L +EM  S + 
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  ++NT +D LCK G + EA ++   +     E  +  Y+ L+DG C + +++ A ++
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA-H------------------DLFLDMEA 223
           F ++   G MPNV++YN +I+G+C   ++DKA H                   +F  M  
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVC 388

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           KG  PN +++NTL+ G  +     K + L   M
Sbjct: 389 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 421



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           M   S LL L  Q    G+ PN +    LI+ FC    +  A  +   +   G   +  T
Sbjct: 74  MKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTAT 133

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           + TLI G C    + E+L+L+ +M+ +G RP VVTY TL +GL ++     A++L   M 
Sbjct: 134 FTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 193

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             +       YNT ID LCK+  + EA  LF  +        I  Y+ LI  LC + + +
Sbjct: 194 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 253

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               L   +    +MP+VV++N ++   C +G++ +AHD+   M  +GV PN VT+  LM
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313

Query: 238 LGCIRNNETSKVVELLHRM 256
            G    +E  + V++   M
Sbjct: 314 DGHCLLSEMDEAVKVFDTM 332



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 139/277 (50%), Gaps = 19/277 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M+ +G+ P+ F Y++LI   C   E      L   M  +  M +VV++NT++
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   V E+ ++  +M+ +G+ P VVTY  L  G   + +++ A+K+FD M      
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 123 AETSTYNTFIDGLCKNGYIV-------------------EAAELFRTLRVLKCELGIEAY 163
               +YNT I+G CK   I                    EA ++F T+    C   + +Y
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISY 398

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + LI+G CKI +++ A  LF  + R  L+P+ VTY+ +IHG C+  ++  A  LF +M A
Sbjct: 399 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 458

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
               PN VT+  L+    +N   ++ + LL  ++  N
Sbjct: 459 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 495



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 124/259 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A    + M++    P+   ++ L+              L   MD  G   N+ T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    V  + ++ +++L  G +P   T+ TL  G+    ++  AL LFD+M    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK G    A  L  ++    C+  + AY+ +ID LCK  ++  A+
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G+ P++ TYN +IH  CN  +      L  +M    + P+ V+FNT++   
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 241 IRNNETSKVVELLHRMDER 259
            +  + ++  +++ +M +R
Sbjct: 282 CKEGKVTEAHDVVDKMIQR 300



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 35/244 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D M+ +G  PN   Y+TLI+G+C    ID+A  LF  M     + + VTY+T
Sbjct: 376 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY--------------------------- 93
           LI+G C  + +++++ L+ EM++    P +VTY                           
Sbjct: 436 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 495

Query: 94  --------NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                   N    G+    ++E A  LF  +    +  +  TY+  I+GLC+ G + EA+
Sbjct: 496 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 555

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +LFR +    C L    Y+ +  G  +  +   A +L Q +   G   +  T  + +   
Sbjct: 556 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 615

Query: 206 CNDG 209
            +DG
Sbjct: 616 SDDG 619



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  +    + P+  V +  IDG C  GE++ AR+LF ++   G   +V TY+ 
Sbjct: 481 LAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSI 540

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+   ++E+  L+ EM   G       YNT+  G    ++   A++L  EM    
Sbjct: 541 MINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 600

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFR 149
            +A+ ST   F+  L  +G      ++ R
Sbjct: 601 FSADASTMTLFVKMLSDDGLDQSLKQILR 629



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 79/182 (43%)

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
           ++MLS       +++N         + ++ A+  F+ M        T  +N  +  + K 
Sbjct: 15  TQMLSLLPHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKM 74

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
            +      L   +        I     LI+  C + ++  A+ +   + ++G  P+  T+
Sbjct: 75  KHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATF 134

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             +I G C +G++ +A  LF  M  +G  P+ VT+ TL+ G  +   TS  + LL  M +
Sbjct: 135 TTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 194

Query: 259 RN 260
           +N
Sbjct: 195 KN 196


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  206 bits (524), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 158/259 (61%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  ++  MI++GV P+   YS ++DG+CL G++DRAR +F  +   G   N+ +Y+ 
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK K++ +++ L+ E+  KG++P  VTY+T+ HGL E+ ++  A K+FDEM    
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   ++T + G  K G + EA  LF  L   + +  I  Y+ +I+GLCK  ++  A 
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAH 468

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ LP +GL+P+V TYN+MI GFC +G  D+   +   ME  G   N +T+N +M G 
Sbjct: 469 AIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGF 528

Query: 241 IRNNETSKVVELLHRMDER 259
            R+N+ S++V  +  M  R
Sbjct: 529 FRSNKISEIVSFMKEMAGR 547



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 126/224 (56%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +Y T+++G    G  ++   L   M+      +V TY+ +I+  CK  +++ ++NL
Sbjct: 166 PNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINL 225

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            +EM  K I P + TYN+L  GL ++ Q E    L  EM + ++     T++  IDGLCK
Sbjct: 226 LNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCK 285

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G + +A E+ R +     E  I  YS ++DG C  G+++ A  +F  L   G+ PN+ +
Sbjct: 286 EGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           Y+I+I+G+C    + KA  LF ++  KG+ P+ VT++T++ G I
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLI 389



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 1/254 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL +M Q   +P+   YS +ID  C    +D A  L   M       N+ TYN+LI+G C
Sbjct: 190 LLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLC 249

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K    E+   L SEM++  I P V T++ L  GL +  +VE A ++   M    V  +  
Sbjct: 250 KLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDII 309

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY+  +DG C  G +  A  +F  LR    +  I +YS LI+G CK   L  A +LF  +
Sbjct: 310 TYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEI 369

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL P+ VTY+ ++HG    G++  A  +F +M   G  P+    +TL+ G  +    
Sbjct: 370 SQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLV 429

Query: 247 SKVVELLHRMDERN 260
            + + L  ++ ERN
Sbjct: 430 EEAMLLFSKL-ERN 442



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 137/260 (52%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYN 59
           +D A  +L + ++ G+  N   ++TL+ G     ++  A  LF  +     C  N V Y 
Sbjct: 113 IDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYG 172

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T++NG  K    E++L+L   M     +P V TY+ +   L +   ++ A+ L +EM+  
Sbjct: 173 TVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQK 232

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++     TYN+ IDGLCK G   +   L   +  L     +  +S LIDGLCK GK+E A
Sbjct: 233 NIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDA 292

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+ + +   G+ P+++TY+ ++ G+C  GQ+D+A  +F  +  KG+ PN  +++ L+ G
Sbjct: 293 DEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILING 352

Query: 240 CIRNNETSKVVELLHRMDER 259
             +    +K ++L   + ++
Sbjct: 353 YCKKKNLAKAMQLFGEISQK 372



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 122/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+ +++  +G++PN F YS LI+G+C    + +A +LF  +   G   + VTY+T
Sbjct: 324 VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G  +   + ++  ++ EML  G  P +  ++TL  G F+   VE A+ LF +++ + 
Sbjct: 384 ILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                S Y   I+GLCKN  + EA  +F  L  +     +  Y+ +I G C+ G  +   
Sbjct: 444 EDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVK 503

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            + + +   G   N +TYN+++ GF    ++ +      +M  +G + +  T   L+
Sbjct: 504 GILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 1/222 (0%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A  LF  M     + +V+ ++ L       K     ++L+ EM   GI  +    N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVL 154
           + +     H+++ A  +      + +     T+NT + GL     + +A  LF+ L R  
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            CE     Y  +++GL K G  E    L + + +    P+V TY+I+I   C D  +D A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +L  +M+ K + PN  T+N+L+ G  +  +  KV  LL  M
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM 264



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 57/125 (45%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   Y+ +I+G C    +  A  +F  +   G + +V TYN +I G+C+    +E   + 
Sbjct: 447 NISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGIL 506

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M   G     +TYN +  G F  +++   +    EM     + + +T    I+ L +N
Sbjct: 507 RKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKEN 566

Query: 139 GYIVE 143
             IV+
Sbjct: 567 PSIVD 571


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  204 bits (518), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 100/230 (43%), Positives = 139/230 (60%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F YS+LI+GFC+   +D A+ +F  M    C  NVVTYNTLI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K ++E + L+ EM  +G+    VTY TL HG F+    ++A  +F +M    V 
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT +DGLCKNG + +A  +F  L+  K E  I  Y+ +I+G+CK GK+E  W+L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           F SL   G+ P+V+ YN MI GFC  G  ++A  LF  M   G  P+  T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  169 bits (429), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 140/256 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +ASRLL  MI+R + PN   ++ LID F   G++  A +L+  M       ++ TY++LI
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++E+ +++  M+SK   P VVTYNTL +G  +  +++  ++LF EM    + 
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TY T I G  +      A  +F+ +        I  Y+ L+DGLCK GKLE A  +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L R  + P + TYNIMI G C  G+++   DLF  +  KGV P+ + +NT++ G  R
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552

Query: 243 NNETSKVVELLHRMDE 258
                +   L  +M E
Sbjct: 553 KGLKEEADALFRKMRE 568



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 135/237 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+QRG +PN   Y  +++G C  G+ID A  L   M+      NVV Y+T+I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK +  +++LNL++EM +KG+RP V+TY++L   L    +   A +L  +M    + 
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  ID   K G +VEA +L+  +     +  I  YS LI+G C   +L+ A  +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F+ +      PNVVTYN +I+GFC   ++D+  +LF +M  +G+  N VT+ TL+ G
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G RP+   ++TLI G  L  +   A  L   M   GC  N+VTY  
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ + NL ++M +  I   VV Y+T+   L +    + AL LF EM++  
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY++ I  LC      +A+ L   +   K    +  ++ LID   K GKL  A 
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + +  + P++ TY+ +I+GFC   ++D+A  +F  M +K   PN VT+NTL+ G 
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + VEL   M +R
Sbjct: 411 CKAKRIDEGVELFREMSQR 429



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 126/250 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+  N + Y+ LI+ FC   +I  A  L   M   G   ++VT ++L+NGYC  K 
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + +++ L  +M+  G RP  +T+ TL HGLF  ++   A+ L D M          TY  
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++GLCK G I  A  L   +   K E  +  YS +ID LCK    + A  LF  +   G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PNV+TY+ +I   CN  +   A  L  DM  + + PN VTFN L+   ++  +  +  
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350

Query: 251 ELLHRMDERN 260
           +L   M +R+
Sbjct: 351 KLYDEMIKRS 360



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 65/126 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  +   M+  GV PN   Y+TL+DG C  G++++A  +F  +  +     + TYN +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G CK   VE+  +L+  +  KG++P V+ YNT+  G       E A  LF +M+    
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571

Query: 122 AAETST 127
             ++ T
Sbjct: 572 LPDSGT 577



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 91/200 (45%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  ++     +  +++++ L+  M+     P++  +N L   + ++ + +  + L ++MQ
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              ++    TYN  I+  C+   I  A  L   +  L  E  I   S L++G C   ++ 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  L   +  +G  P+ +T+  +IHG     +  +A  L   M  +G  PN VT+  ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 238 LGCIRNNETSKVVELLHRMD 257
            G  +  +      LL++M+
Sbjct: 233 NGLCKRGDIDLAFNLLNKME 252


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  203 bits (517), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 158/256 (61%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  ++  MI++GV P+   Y+ +IDG+ L G++DRARE+F SM       N+++YN 
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNI 358

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGY + K ++E++ +  E+  KG++P++VT N L HGLFE+ + + A   FDEM  + 
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+ T + G  KNG + EA   F  L   + +  I+ Y+ +IDGLCK GKL+ A 
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAH 478

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ LP +GL P+V+TY  MI G+C +G +D+A D+   ME  G   +  T+N ++ G 
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538

Query: 241 IRNNETSKVVELLHRM 256
           +R+N+ S++   L  +
Sbjct: 539 LRSNKVSEMKAFLEEI 554



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 135/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + +A  L   +++  +  PN  +Y T+++G C  G   +A +L   M+      N   Y+
Sbjct: 158 VKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYS 217

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +I+ +CK   ++ + +L +EM  K I P + TY+TL   L ++ Q E+   LF EM H 
Sbjct: 218 IVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL 277

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++     T+N+ IDGLCK G + +A E+ R +     +  +  Y+ +IDG    G+++ A
Sbjct: 278 NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+F S+    + PN+++YNI+I+G+    ++D+A  +  ++  KG+ P+ VT N L+ G
Sbjct: 338 REIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHG 397

Query: 240 CIRNNETSKVVELLHRM 256
                 T         M
Sbjct: 398 LFELGRTKSAQNFFDEM 414



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 132/257 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL LM Q   +PN  +YS +ID FC  G +D A  L   M       ++ TY+TLI
Sbjct: 196 KAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK    E    L+ EM+   I P V T+N++  GL +  +VE A ++   M    V 
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  IDG    G +  A E+F ++     E  I +Y+ LI+G  +  K++ A ++
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQV 375

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + GL P++VT N+++HG    G+   A + F +M + G  P+  T  TL+ G  +
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435

Query: 243 NNETSKVVELLHRMDER 259
           N    + +   H+++ R
Sbjct: 436 NGLVEEAMSHFHKLERR 452



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LL+ M Q+ + P+ F YSTLID  C   + +  R LF+ M       NV T+N+
Sbjct: 229 LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS 288

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   VE++  +   M+ KG+ P V+TYN +  G     QV+ A ++FD M +  
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS 348

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +YN  I+G  +   I EA ++ R +     +  I   + L+ GL ++G+ ++A 
Sbjct: 349 IEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 181 ELFQSLPRVGLMP-----------------------------------NVVTYNIMIHGF 205
             F  +   G +P                                   N+  Y  +I G 
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C +G++DKAH  F  +   G+ P+ +T+  ++ G  +     +  ++L +M++
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMED 521



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 1/259 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNT 60
           D    +L +  ++G+  N  +++TL+ G     ++  A  LF  +   N C  N V Y T
Sbjct: 124 DLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGT 183

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK    +++ +L   M     +P    Y+ +     +   ++ A  L +EM+   
Sbjct: 184 VMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKS 243

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T ID LCK         LF  +  L     +  ++ +IDGLCK GK+E A 
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ + +   G+ P+V+TYN++I G+   GQ+D+A ++F  M  K + PN +++N L+ G 
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGY 363

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  + +++   + ++
Sbjct: 364 ARQKKIDEAMQVCREISQK 382



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           F+ S +++  CL    D    +       G   N V +NTL+ G      V+++++L+ +
Sbjct: 108 FILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKK 167

Query: 81  MLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
           ++ + I  P  V Y T+ +GL +    + A  L   M+       T  Y+  ID  CK+G
Sbjct: 168 LVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDG 227

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            +  A  L   ++       I  YS LID LCK+ + E    LF  +  + + PNV T+N
Sbjct: 228 MLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFN 287

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +I G C +G+++ A ++   M  KGV P+ +T+N ++ G     +  +  E+   M
Sbjct: 288 SVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 1/203 (0%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A  LF  M     + +VV+++ L+      K     ++L+ E+    I       + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVL 154
           + +    +H+ +    +        +      +NT + GL     + +A  LF+ L R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            CE     Y  +++GLCK G  + A++L + + +    PN   Y+I+I  FC DG +D A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 215 HDLFLDMEAKGVAPNCVTFNTLM 237
             L  +M+ K + P+  T++TL+
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLI 255



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 64/133 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA      + +R    N  +Y+ +IDG C  G++D+A   F  + + G   +V+TY  
Sbjct: 439 VEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTA 498

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYC+   ++E+ ++  +M   G      TYN +  G    ++V       +E+    
Sbjct: 499 MISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKS 558

Query: 121 VAAETSTYNTFID 133
            + E +T    +D
Sbjct: 559 FSFEAATVELLMD 571



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 9/203 (4%)

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N +   K ++++ +L+ +M+     P+VV+++ L   L  +      + LF E+    + 
Sbjct: 45  NEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIP 104

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE----AYSCLIDGLCKIGKLET 178
                 +  ++  C    ++   +L  ++  +  + GI      ++ L+ GL    K++ 
Sbjct: 105 VHEFILSIVVNSCC----LMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKD 160

Query: 179 AWELFQSLPRVGLM-PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A  LF+ L R  +  PN V Y  +++G C  G   KA DL   ME     PN   ++ ++
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVI 220

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
               ++        LL+ M +++
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKS 243


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  202 bits (515), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 155/254 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F Y++LI+GFC+   +D+A+++F  M    C  ++ TYNTLI
Sbjct: 272 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 331

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK+K VE+   L+ EM  +G+    VTY TL  GLF     ++A K+F +M    V 
Sbjct: 332 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 391

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLC NG + +A E+F  ++  + +L I  Y+ +I+G+CK GK++  W+L
Sbjct: 392 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 451

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ PNVVTYN MI G C+   + +A+ L   M+  G  P+  T+NTL+   +R
Sbjct: 452 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 511

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 512 DGDKAASAELIREM 525



 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 136/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +AS+LL  MI++ + PN   ++ LID F   G+   A +L   M       ++ TYN+LI
Sbjct: 237 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++++  ++  M+SK   P + TYNTL  G  +  +VE   +LF EM H  + 
Sbjct: 297 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 356

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TY T I GL  +G    A ++F+ +        I  YS L+DGLC  GKLE A E+
Sbjct: 357 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 416

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + +  +  ++  Y  MI G C  G++D   DLF  +  KGV PN VT+NT++ G   
Sbjct: 417 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 476

Query: 243 NNETSKVVELLHRMDE 258
                +   LL +M E
Sbjct: 477 KRLLQEAYALLKKMKE 492



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 35/291 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+QRG +PN   Y  +++G C  G+ID A  L   M+      +VV +NT+I
Sbjct: 132 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 191

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
           +  CK + V+++LNL+ EM +KGIRP VVTY++L                          
Sbjct: 192 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 251

Query: 97  -----FHGLFEIHQVE----HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                F+ L +    E     A KL D+M    +  +  TYN+ I+G C +  + +A ++
Sbjct: 252 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 311

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +    C   ++ Y+ LI G CK  ++E   ELF+ +   GL+ + VTY  +I G  +
Sbjct: 312 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 371

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           DG  D A  +F  M + GV P+ +T++ L+ G   N +  K +E+   M +
Sbjct: 372 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 422



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 133/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G RP+   ++TLI G  L  +   A  L   M   GC  N+VTY  
Sbjct: 95  ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 154

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ + NL ++M +  I   VV +NT+   L +   V+ AL LF EM+   
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ I  LC  G   +A++L   +   K    +  ++ LID   K GK   A 
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 274

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   + +  + P++ TYN +I+GFC   ++DKA  +F  M +K   P+  T+NTL+ G 
Sbjct: 275 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 334

Query: 241 IRNNETSKVVELLHRMDER 259
            ++       EL   M  R
Sbjct: 335 CKSKRVEDGTELFREMSHR 353



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 122/223 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++ + M+ +   P+   Y+TLI GFC +  ++   ELF  M   G + + VTY T
Sbjct: 305 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G     D + +  ++ +M+S G+ P ++TY+ L  GL    ++E AL++FD MQ S+
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y T I+G+CK G + +  +LF +L +   +  +  Y+ +I GLC    L+ A+
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 484

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
            L + +   G +P+  TYN +I     DG    + +L  +M +
Sbjct: 485 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 134/266 (50%), Gaps = 10/266 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM------HN 54
           +D+A  L   M++    P+ F ++ L+       + D    L +S+ + G M       +
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD----LVISLALLGKMMKLGYEPS 78

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           +VT ++L+NGYC  K + +++ L  +M+  G RP  +T+ TL HGLF  ++   A+ L D
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            M          TY   ++GLCK G I  A  L   +   K E  +  ++ +ID LCK  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            ++ A  LF+ +   G+ PNVVTY+ +I   C+ G+   A  L  DM  K + PN VTFN
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+   ++  +  +  +L   M +R+
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRS 284



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 128/254 (50%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M++ G  P+    S+L++G+C    I  A  L   M   G   + +T+ TLI+G  
Sbjct: 66  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 125

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
                 E++ L   M+ +G +P +VTY  + +GL +   ++ A  L ++M+ + + A+  
Sbjct: 126 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 185

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            +NT ID LCK  ++ +A  LF+ +        +  YS LI  LC  G+   A +L   +
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
               + PN+VT+N +I  F  +G+  +A  L  DM  + + P+  T+N+L+ G   ++  
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305

Query: 247 SKVVELLHRMDERN 260
            K  ++   M  ++
Sbjct: 306 DKAKQMFEFMVSKD 319



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 68/127 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M +  ++ + ++Y+T+I+G C  G++D   +LF S+ + G   NVVTYNT
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C  + ++E+  L  +M   G  P   TYNTL            + +L  EM+   
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 529

Query: 121 VAAETST 127
              + ST
Sbjct: 530 FVGDAST 536


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  202 bits (515), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 155/254 (61%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI+R + P+ F Y++LI+GFC+   +D+A+++F  M    C  ++ TYNTLI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK+K VE+   L+ EM  +G+    VTY TL  GLF     ++A K+F +M    V 
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLC NG + +A E+F  ++  + +L I  Y+ +I+G+CK GK++  W+L
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ PNVVTYN MI G C+   + +A+ L   M+  G  P+  T+NTL+   +R
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 513 DGDKAASAELIREM 526



 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 136/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +AS+LL  MI++ + PN   ++ LID F   G+   A +L   M       ++ TYN+LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    ++++  ++  M+SK   P + TYNTL  G  +  +VE   +LF EM H  + 
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TY T I GL  +G    A ++F+ +        I  YS L+DGLC  GKLE A E+
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + +  +  ++  Y  MI G C  G++D   DLF  +  KGV PN VT+NT++ G   
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477

Query: 243 NNETSKVVELLHRMDE 258
                +   LL +M E
Sbjct: 478 KRLLQEAYALLKKMKE 493



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 35/291 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+QRG +PN   Y  +++G C  G+ID A  L   M+      +VV +NT+I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
           +  CK + V+++LNL+ EM +KGIRP VVTY++L                          
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252

Query: 97  -----FHGLFEIHQVE----HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                F+ L +    E     A KL D+M    +  +  TYN+ I+G C +  + +A ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +    C   ++ Y+ LI G CK  ++E   ELF+ +   GL+ + VTY  +I G  +
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           DG  D A  +F  M + GV P+ +T++ L+ G   N +  K +E+   M +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 133/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G RP+   ++TLI G  L  +   A  L   M   GC  N+VTY  
Sbjct: 96  ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ + NL ++M +  I   VV +NT+   L +   V+ AL LF EM+   
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ I  LC  G   +A++L   +   K    +  ++ LID   K GK   A 
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   + +  + P++ TYN +I+GFC   ++DKA  +F  M +K   P+  T+NTL+ G 
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335

Query: 241 IRNNETSKVVELLHRMDER 259
            ++       EL   M  R
Sbjct: 336 CKSKRVEDGTELFREMSHR 354



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 129/250 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+  N + Y+ LI+ FC   +I  A  L   M   G   ++VT ++L+NGYC  K 
Sbjct: 36  MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + +++ L  +M+  G RP  +T+ TL HGLF  ++   A+ L D M          TY  
Sbjct: 96  ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++GLCK G I  A  L   +   K E  +  ++ +ID LCK   ++ A  LF+ +   G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PNVVTY+ +I   C+ G+   A  L  DM  K + PN VTFN L+   ++  +  +  
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275

Query: 251 ELLHRMDERN 260
           +L   M +R+
Sbjct: 276 KLHDDMIKRS 285



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 122/223 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++ + M+ +   P+   Y+TLI GFC +  ++   ELF  M   G + + VTY T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G     D + +  ++ +M+S G+ P ++TY+ L  GL    ++E AL++FD MQ S+
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y T I+G+CK G + +  +LF +L +   +  +  Y+ +I GLC    L+ A+
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
            L + +   G +P+  TYN +I     DG    + +L  +M +
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 129/257 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M++ G  P+    S+L++G+C    I  A  L   M   G   + +T+ TLI+
Sbjct: 64  ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G        E++ L   M+ +G +P +VTY  + +GL +   ++ A  L ++M+ + + A
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   +NT ID LCK  ++ +A  LF+ +        +  YS LI  LC  G+   A +L 
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +    + PN+VT+N +I  F  +G+  +A  L  DM  + + P+  T+N+L+ G   +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303

Query: 244 NETSKVVELLHRMDERN 260
           +   K  ++   M  ++
Sbjct: 304 DRLDKAKQMFEFMVSKD 320



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 68/127 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M +  ++ + ++Y+T+I+G C  G++D   +LF S+ + G   NVVTYNT
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C  + ++E+  L  +M   G  P   TYNTL            + +L  EM+   
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530

Query: 121 VAAETST 127
              + ST
Sbjct: 531 FVGDAST 537


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/254 (41%), Positives = 148/254 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL +M + G++P    YSTL+DG+CL GE+  A+++F +M   G   NV +YN +I
Sbjct: 238 EAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMI 297

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK K V+E++NL  EML K + P  VTYN+L  GL +  ++  AL L +EM H    
Sbjct: 298 NGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQP 357

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+  TY + +D LCKN  + +A  LF  ++    +  +  Y+ LIDGLCK G+L+ A EL
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQEL 417

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ L   G   +V TY +MI G C +G  D+A  +   ME  G  PN VTF  ++     
Sbjct: 418 FQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFE 477

Query: 243 NNETSKVVELLHRM 256
            +E  K  +LLH M
Sbjct: 478 KDENDKAEKLLHEM 491



 Score =  170 bits (430), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 145/251 (57%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + +   Y TL++G C  GE   A +L   ++      NVV YNT+I+G CK 
Sbjct: 104 DKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKD 163

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V E+ +LYSEM ++GI P  +TY TL +G   + Q+  A  L DEM   ++      Y
Sbjct: 164 KLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIY 223

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  I+ LCK G + EA  L   +     + G+  YS L+DG C +G+++ A ++F ++ +
Sbjct: 224 NILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ 283

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G+ PNV +YNIMI+G C   ++D+A +L  +M  K + P+ VT+N+L+ G  ++   + 
Sbjct: 284 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 343

Query: 249 VVELLHRMDER 259
            + L++ M  R
Sbjct: 344 ALNLMNEMHHR 354



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 132/256 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL ++  R  RPN  +Y+T+IDG C    ++ A +L+  MD  G   + +TY TLI 
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    +  + +L  EM+ K I P V  YN L + L +   V+ A  L   M    +  
Sbjct: 194 GFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKP 253

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY+T +DG C  G +  A ++F  +  +     + +Y+ +I+GLCK  +++ A  L 
Sbjct: 254 GVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLL 313

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    ++P+ VTYN +I G C  G++  A +L  +M  +G   + VT+ +L+    +N
Sbjct: 314 REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 373

Query: 244 NETSKVVELLHRMDER 259
               K   L  +M ER
Sbjct: 374 QNLDKATALFMKMKER 389



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 106/220 (48%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A  L   M++ G   N VT N LIN +C    +  S ++  ++L  G +P  +T NTL  
Sbjct: 29  AISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMK 88

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           GL    +V+ +L   D++       +  +Y T ++GLCK G    A +L R +       
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP 148

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  Y+ +IDGLCK   +  A++L+  +   G+ P+ +TY  +I+GFC  GQ+  A  L 
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLL 208

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +M  K + P    +N L+    +     +   LL  M +
Sbjct: 209 DEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTK 248



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 98/185 (52%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           ++ +N ++    K K    +++L  +M  KGIR   VT N L +    + Q+  +  +  
Sbjct: 10  IIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLG 69

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++       +T T NT + GLC  G + ++      +     ++   +Y  L++GLCKIG
Sbjct: 70  KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIG 129

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +   A +L + +      PNVV YN +I G C D  +++A+DL+ +M+A+G+ P+ +T+ 
Sbjct: 130 ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYT 189

Query: 235 TLMLG 239
           TL+ G
Sbjct: 190 TLIYG 194



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 65/133 (48%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +N  +  L K    + A  L + + V          + LI+  C +G++  ++ +   + 
Sbjct: 13  FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKIL 72

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           ++G  P+ +T N ++ G C  G++ K+      + A+G   + V++ TL+ G  +  ET 
Sbjct: 73  KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132

Query: 248 KVVELLHRMDERN 260
             V+LL  +++R+
Sbjct: 133 CAVKLLRMIEDRS 145


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/257 (38%), Positives = 154/257 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++D+MIQ  ++P+   Y++L+DG CL  E+ +   +F +M   GC+ +V++Y TLI
Sbjct: 282 KAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLI 341

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK + +++++ L+ EM  +G+ P  VTYNTL HGL  + ++  A+ LF EM      
Sbjct: 342 NGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQI 401

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY    D LCKN  + EA  L + +     +  I  YS ++DG+C+ G+LE A +L
Sbjct: 402 PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDL 461

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  L   GL P+V TY IMI+G C  G + +A  LF +M+  G +PN  T+N +  G +R
Sbjct: 462 FSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLR 521

Query: 243 NNETSKVVELLHRMDER 259
           NNET + ++L   M  R
Sbjct: 522 NNETLRAIQLFQEMLSR 538



 Score =  173 bits (438), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 140/254 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D M   G +P+   Y TLI+G C  G    A     SM+   C   VV Y+T+I
Sbjct: 142 EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTII 201

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + + E+L+L+S+ML+KGI P   TY++L HGL  +   + A++LF  M H  + 
Sbjct: 202 DSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 261

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+NT +D LCK G +V+A  +   +     +  +  Y+ L+DG C   ++     +
Sbjct: 262 PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNV 321

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++ R G +P+V++Y  +I+G+C    MDKA  LF +M  +G+ P+ VT+NTL+ G   
Sbjct: 322 FDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH 381

Query: 243 NNETSKVVELLHRM 256
                  + L H M
Sbjct: 382 VGRLRDAIALFHEM 395



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 138/251 (54%), Gaps = 1/251 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +   + D M+++G  P+   Y+TLI+G+C    +D+A  LF  M   G + + VTYNT
Sbjct: 315 MGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNT 374

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    + +++ L+ EM+  G  P +VTY  LF  L + H++  A+ L   ++ ++
Sbjct: 375 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+  +DG+C+ G +  A +LF  L        +  Y+ +I+GLC+ G L  A 
Sbjct: 435 LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEAS 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G  PN  TYN++  GF  + +  +A  LF +M ++G + + V+  TL++  
Sbjct: 495 KLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSID-VSTTTLLVEM 553

Query: 241 IRNNETSKVVE 251
           + ++   + V+
Sbjct: 554 LSDDGLDQSVK 564



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 116/237 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + M++    P+   +S L+              L+  MD  G  HN  T N 
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    +  + ++  ++L  G +P+  T+ TL  GL    ++  AL+LFD+M    
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK G    A    R++    C   +  YS +ID LCK  +L  A 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF  +   G+ PN  TY+ +IHG C  G   +A  LF  M  + + P+ +TFNTL+
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           ID A  LF  M       ++V ++ L+    + K     L+LY +M S GI     T N 
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L +    ++++  A  +  ++        T+T+ T I GLC  G I EA +LF  +    
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
            +  +  Y  LI+GLCK+G   TA    +S+ +    P VV Y+ +I   C D Q+ +A 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            LF DM AKG++PN  T+++L+ G        + + L + M  R 
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 158/256 (61%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  ++  MI++GV P+   Y+ +IDG+ L G++DRARE+F SM       ++++YN 
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNI 358

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGY + K ++E++ +  E+  KG++P++VT N L HGLFE+ + + A   FDEM  + 
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+ T + G  KNG + EA   F  L   + +  I+ Y+ +IDGLCK GKL+ A 
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAH 478

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ LP +GL P+V+TY  MI G+C +G +D+A D+   ME  G   +  T+N ++ G 
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538

Query: 241 IRNNETSKVVELLHRM 256
           +R+N+ S++   L  +
Sbjct: 539 LRSNKVSEMKAFLEEI 554



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 135/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + +A  L   +++  +  PN  +Y T+++G C  G   +A +L   M+      N  TY 
Sbjct: 158 VKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYT 217

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +I+ +CK   ++ + +L +EM  K I P + TY+TL   L ++ Q E+   LF EM H 
Sbjct: 218 IVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL 277

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++     T+N+ IDGLCK G + +A E+ R +     +  +  Y+ +IDG    G+++ A
Sbjct: 278 NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+F S+    + P++++YNI+I+G+    ++D+A  +  ++  KG+ P+ VT N L+ G
Sbjct: 338 REIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHG 397

Query: 240 CIRNNETSKVVELLHRM 256
                 T         M
Sbjct: 398 LFELGRTKSAQNFFDEM 414



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 131/257 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL LM Q   +PN   Y+ +ID FC  G +D A  L   M       ++ TY+TLI
Sbjct: 196 KAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK    E    L+ EM+   I P V T+N++  GL +  +VE A ++   M    V 
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  IDG    G +  A E+F ++     E  I +Y+ LI+G  +  K++ A ++
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQV 375

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + GL P++VT N+++HG    G+   A + F +M + G  P+  T  TL+ G  +
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435

Query: 243 NNETSKVVELLHRMDER 259
           N    + +   H+++ R
Sbjct: 436 NGLVEEAMSHFHKLERR 452



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LL+ M Q+ + P+ F YSTLID  C   + +  R LF+ M       NV T+N+
Sbjct: 229 LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS 288

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   VE++  +   M+ KG+ P V+TYN +  G     QV+ A ++FD M +  
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS 348

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +YN  I+G  +   I EA ++ R +     +  I   + L+ GL ++G+ ++A 
Sbjct: 349 IEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 181 ELFQSLPRVGLMP-----------------------------------NVVTYNIMIHGF 205
             F  +   G +P                                   N+  Y  +I G 
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C +G++DKAH  F  +   G+ P+ +T+  ++ G  +     +  ++L +M++
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMED 521



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 131/259 (50%), Gaps = 1/259 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNT 60
           D    +L +  ++G+  N   ++TLI G     ++  A  LF  +   N C  N V Y T
Sbjct: 124 DLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGT 183

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK    +++ +L   M     +P   TY  +     +   ++ A  L +EM+   
Sbjct: 184 VMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKS 243

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T ID LCK         LF  +  L     +  ++ +IDGLCK GK+E A 
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ + +   G+ P+V+TYN++I G+   GQ+D+A ++F  M  K + P+ +++N L+ G 
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGY 363

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  + +++   + ++
Sbjct: 364 ARQKKIDEAMQVCREISQK 382



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 1/237 (0%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           F+ S +++  CL    D    +       G  +N VT+ TLI G      V+++++L+ +
Sbjct: 108 FILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKK 167

Query: 81  MLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
           ++ + I  P  V Y T+ +GL +    + A  L   M+       T TY   ID  CK+G
Sbjct: 168 LVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDG 227

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            +  A  L   ++       I  YS LID LCK+ + E    LF  +  + + PNV T+N
Sbjct: 228 MLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFN 287

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +I G C +G+++ A ++   M  KGV P+ +T+N ++ G     +  +  E+   M
Sbjct: 288 SVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 1/203 (0%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A  LF  M     + +V +++ L+      K     ++L+ E+    I       + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVL 154
           + +    +H+ +    +        +     T+ T I GL     + +A  LF+ L R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            CE     Y  +++GLCK G  + A++L + + +    PN  TY I+I  FC DG +D A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 215 HDLFLDMEAKGVAPNCVTFNTLM 237
             L  +M+ K + P+  T++TL+
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLI 255



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 68/141 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA      + +R    N  +Y+ +IDG C  G++D+A   F  + + G   +V+TY  
Sbjct: 439 VEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTA 498

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYC+   ++E+ ++  +M   G      TYN +  G    ++V       +E+    
Sbjct: 499 MISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKS 558

Query: 121 VAAETSTYNTFIDGLCKNGYI 141
            + E +T    +D + ++  I
Sbjct: 559 FSFEAATVELLMDIIAEDPSI 579



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 9/203 (4%)

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N +   K ++++ +L+ +M+     P+V +++ L   +  +      + LF E+    + 
Sbjct: 45  NEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIP 104

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE----AYSCLIDGLCKIGKLET 178
                 +  ++  C    ++   +L  ++  +  + GI      ++ LI GL    K++ 
Sbjct: 105 VHEFILSIVVNSCC----LMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKD 160

Query: 179 AWELFQSLPRVGLM-PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A  LF+ L R  +  PN V Y  +++G C  G   KA DL   ME     PN  T+  ++
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVI 220

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
               ++        LL+ M +++
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKS 243


>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 412

 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 101/257 (39%), Positives = 152/257 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L +M+++G+ PNA  YS+L+DG+CL  E++ A+ +F +M + G   NV +YN +I
Sbjct: 153 EAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMI 212

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K  +E++NL+ EM  + + P VVTYN+L +GL +  ++ +ALKL DEM      
Sbjct: 213 NGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQP 272

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY++ +D LCKN  + +A  L + L+       +  Y+ LIDGLCK G+LE A  +
Sbjct: 273 PDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNI 332

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L   G    V TY +MIHGFCN G  D+A  L   M+     PN +T+  ++     
Sbjct: 333 FEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFD 392

Query: 243 NNETSKVVELLHRMDER 259
           N+E  K   LL  M  R
Sbjct: 393 NDENDKAENLLREMITR 409



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 119/225 (52%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           G +  A+ +   M   G   N VTY++L++GYC   +V  +  ++S M  +G+   V +Y
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           N + +G  +I   + A+ LF+EM    +  +  TYN+ I+GLCK+G I  A +L   +  
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
                 I  YS L+D LCK  +++ A  L ++L   G+ PN+ TY I+I G C  G+++ 
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLED 328

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           AH++F D+  KG      T+  ++ G        + + LL +M +
Sbjct: 329 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKD 373



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 35/225 (15%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L + M  R + P+   Y++LI+G C +G+I  A +L   M   G   +++TY++L
Sbjct: 222 DEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSL 281

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++  CK   V++++ L   +  +GIRP + TY  L  GL +  ++E A  +F+++     
Sbjct: 282 LDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 341

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY   I G C  G   EA  L   ++   C                         
Sbjct: 342 NITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSC------------------------- 376

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
                      PN +TY I+I    ++ + DKA +L  +M  +G+
Sbjct: 377 ----------FPNALTYEIIIRSLFDNDENDKAENLLREMITRGL 411



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 81/154 (52%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           V+ A  +   M    +     TY++ +DG C    +  A  +F T+ +      + +Y+ 
Sbjct: 151 VKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNI 210

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +I+G CKI   + A  LF+ +    L+P+VVTYN +I+G C  G++  A  L  +M  +G
Sbjct: 211 MINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRG 270

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             P+ +T+++L+    +N++  K + LL  + ++
Sbjct: 271 QPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQ 304


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  199 bits (507), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 101/256 (39%), Positives = 148/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   MIQRG+ P+   Y++LIDGFC   ++D+A  +   M   GC  N+ T+N 
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK   +++ L L+ +M  +G+    VTYNTL  G  E+ ++E A +LF EM    
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +Y   +DGLC NG   +A E+F  +   K EL I  Y+ +I G+C   K++ AW
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF SLP  G+ P+V TYNIMI G C  G + +A  LF  ME  G +PN  T+N L+   
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572

Query: 241 IRNNETSKVVELLHRM 256
           +   + +K  +L+  +
Sbjct: 573 LGEGDATKSAKLIEEI 588



 Score =  173 bits (439), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 147/257 (57%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+ ++LL  MI+R + P+   +S LID F   G++  A EL   M   G   + VTY +L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   ++++ ++   M+SKG  P + T+N L +G  + + ++  L+LF +M    V
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A+T TYNT I G C+ G +  A ELF+ +   +    I +Y  L+DGLC  G+ E A E
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + +  +  ++  YNI+IHG CN  ++D A DLF  +  KGV P+  T+N ++ G  
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   L  +M+E
Sbjct: 539 KKGSLSEADLLFRKMEE 555



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 137/255 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M +R ++ +A  YS +IDG C  G +D A  LF  M+I G   +++ Y TLI 
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C     ++   L  +M+ + I P VV ++ L     +  ++  A +L  EM    ++ 
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T TY + IDG CK   + +A  +   +    C   I  ++ LI+G CK   ++   ELF
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G++ + VTYN +I GFC  G+++ A +LF +M ++ V P+ V++  L+ G   N
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 244 NETSKVVELLHRMDE 258
            E  K +E+  ++++
Sbjct: 471 GEPEKALEIFEKIEK 485



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 133/232 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+ +LDLM+ +G  PN   ++ LI+G+C    ID   ELF  M + G + + VTYNT
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   +E +  L+ EM+S+ +RP +V+Y  L  GL +  + E AL++F++++ S 
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I G+C    + +A +LF +L +   +  ++ Y+ +I GLCK G L  A 
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            LF+ +   G  PN  TYNI+I     +G   K+  L  +++  G + +  T
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 132/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M++ G +P     + L++G CL G++  A  L   M   G   N VTY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK+     ++ L  +M  + I+   V Y+ +  GL +   +++A  LF+EM+   
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+   Y T I G C  G   + A+L R +   K    + A+S LID   K GKL  A 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + + + G+ P+ VTY  +I GFC + Q+DKA+ +   M +KG  PN  TFN L+ G 
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 241 IRNNETSKVVELLHRMDERN 260
            + N     +EL  +M  R 
Sbjct: 398 CKANLIDDGLELFRKMSLRG 417



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 125/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G +PN   Y  ++   C +G+   A EL   M+      + V Y+ 
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   ++ + NL++EM  KG +  ++ Y TL  G     + +   KL  +M    
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   ++  ID   K G + EA EL + +           Y+ LIDG CK  +L+ A 
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   G  PN+ T+NI+I+G+C    +D   +LF  M  +GV  + VT+NTL+ G 
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432

Query: 241 IRNNETSKVVELLHRMDER 259
               +     EL   M  R
Sbjct: 433 CELGKLEVAKELFQEMVSR 451



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 3/257 (1%)

Query: 7   LLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           +LDL  Q   +G+  N +  S +I+  C   ++  A      +   G   + VT++TLIN
Sbjct: 91  VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C    V E+L L   M+  G +PT++T N L +GL    +V  A+ L D M  +    
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   +  +CK+G    A EL R +   K +L    YS +IDGLCK G L+ A+ LF
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G   +++ Y  +I GFC  G+ D    L  DM  + + P+ V F+ L+   ++ 
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330

Query: 244 NETSKVVELLHRMDERN 260
            +  +  EL   M +R 
Sbjct: 331 GKLREAEELHKEMIQRG 347



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 35/170 (20%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE------------------------- 35
           ++ A  L   M+ R VRP+   Y  L+DG C  GE                         
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497

Query: 36  ----------IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                     +D A +LF S+ + G   +V TYN +I G CK   + E+  L+ +M   G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
             P   TYN L            + KL +E++    + + ST    +D L
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  199 bits (507), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 101/256 (39%), Positives = 148/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   MIQRG+ P+   Y++LIDGFC   ++D+A  +   M   GC  N+ T+N 
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK   +++ L L+ +M  +G+    VTYNTL  G  E+ ++E A +LF EM    
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +Y   +DGLC NG   +A E+F  +   K EL I  Y+ +I G+C   K++ AW
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF SLP  G+ P+V TYNIMI G C  G + +A  LF  ME  G +PN  T+N L+   
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572

Query: 241 IRNNETSKVVELLHRM 256
           +   + +K  +L+  +
Sbjct: 573 LGEGDATKSAKLIEEI 588



 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 147/257 (57%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+ ++LL  MI+R + P+   +S LID F   G++  A EL   M   G   + VTY +L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   ++++ ++   M+SKG  P + T+N L +G  + + ++  L+LF +M    V
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A+T TYNT I G C+ G +  A ELF+ +   +    I +Y  L+DGLC  G+ E A E
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + +  +  ++  YNI+IHG CN  ++D A DLF  +  KGV P+  T+N ++ G  
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   L  +M+E
Sbjct: 539 KKGSLSEADLLFRKMEE 555



 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 133/233 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+ +LDLM+ +G  PN   ++ LI+G+C    ID   ELF  M + G + + VTYNT
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   +E +  L+ EM+S+ +RP +V+Y  L  GL +  + E AL++F++++ S 
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I G+C    + +A +LF +L +   +  ++ Y+ +I GLCK G L  A 
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            LF+ +   G  PN  TYNI+I     +G   K+  L  +++  G + +  T 
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTL 600



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 137/255 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M +R ++ +A  YS +IDG C  G +D A  LF  M+I G   +++ Y TLI 
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C     ++   L  +M+ + I P VV ++ L     +  ++  A +L  EM    ++ 
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T TY + IDG CK   + +A  +   +    C   I  ++ LI+G CK   ++   ELF
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G++ + VTYN +I GFC  G+++ A +LF +M ++ V P+ V++  L+ G   N
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 244 NETSKVVELLHRMDE 258
            E  K +E+  ++++
Sbjct: 471 GEPEKALEIFEKIEK 485



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 132/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M++ G +P     + L++G CL G++  A  L   M   G   N VTY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK+     ++ L  +M  + I+   V Y+ +  GL +   +++A  LF+EM+   
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+   Y T I G C  G   + A+L R +   K    + A+S LID   K GKL  A 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + + + G+ P+ VTY  +I GFC + Q+DKA+ +   M +KG  PN  TFN L+ G 
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 241 IRNNETSKVVELLHRMDER 259
            + N     +EL  +M  R
Sbjct: 398 CKANLIDDGLELFRKMSLR 416



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 125/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G +PN   Y  ++   C +G+   A EL   M+      + V Y+ 
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   ++ + NL++EM  KG +  ++ Y TL  G     + +   KL  +M    
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   ++  ID   K G + EA EL + +           Y+ LIDG CK  +L+ A 
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   G  PN+ T+NI+I+G+C    +D   +LF  M  +GV  + VT+NTL+ G 
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432

Query: 241 IRNNETSKVVELLHRMDER 259
               +     EL   M  R
Sbjct: 433 CELGKLEVAKELFQEMVSR 451



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 3/256 (1%)

Query: 7   LLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           +LDL  Q   +G+  N +  S +I+  C   ++  A      +   G   + VT++TLIN
Sbjct: 91  VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C    V E+L L   M+  G +PT++T N L +GL    +V  A+ L D M  +    
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   +  +CK+G    A EL R +   K +L    YS +IDGLCK G L+ A+ LF
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G   +++ Y  +I GFC  G+ D    L  DM  + + P+ V F+ L+   ++ 
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330

Query: 244 NETSKVVELLHRMDER 259
            +  +  EL   M +R
Sbjct: 331 GKLREAEELHKEMIQR 346



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 120/299 (40%), Gaps = 54/299 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE------------------------- 35
           ++ A  L   M+ R VRP+   Y  L+DG C  GE                         
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497

Query: 36  ----------IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                     +D A +LF S+ + G   +V TYN +I G CK   + E+  L+ +M   G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P   TYN L            + KL +E++    + + ST    +  L          
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLA--------- 608

Query: 146 ELFRTLRVLKC--ELGIEAYSCLIDGLC--KIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
                 R+LK   E  +  ++ L+   C  +   +  A  LF+++  +G  PNVVTYN +
Sbjct: 609 ------RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTV 662

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           I G  N   + +   +   M  +G  PN VT +T + G  + +     + LL +M+  N
Sbjct: 663 IKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  199 bits (506), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 98/256 (38%), Positives = 153/256 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M ++G+ P+ + Y+ L+DG+C   ++D A++LF  MD  GC  NV +YN 
Sbjct: 166 ISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNI 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK+  ++E+  L +EM  K + P + TY+TL  G  ++ + + A +L  EM    
Sbjct: 226 LINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYG 285

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  +DGLCK+G++ EA EL + ++  K E  I  Y+ LI+G+C  GKLE A 
Sbjct: 286 LLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAAR 345

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF +L   G+ P VVTY +MI G    G  ++A +LF +M   G  PN  T+N ++ G 
Sbjct: 346 ELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGF 405

Query: 241 IRNNETSKVVELLHRM 256
           +RN +T   V L+  M
Sbjct: 406 LRNGDTPNAVRLIEEM 421



 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 143/254 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L D M++ G  P+   YST+I+G C  G    A +L   M+  GC  NVV YNT+I
Sbjct: 28  DAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTII 87

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+++ +SEM+ +GI P V TY+++ HG   + +V  A  LF +M   +V 
Sbjct: 88  DSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVI 147

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+   IDGLCK   I EA  +F T+     E  +  Y+ L+DG C   +++ A +L
Sbjct: 148 PNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKL 207

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + R G  PNV +YNI+I+G C  G++D+A  L  +M  K + P+  T++TLM G  +
Sbjct: 208 FNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQ 267

Query: 243 NNETSKVVELLHRM 256
                +  ELL  M
Sbjct: 268 VGRPQEAQELLKEM 281



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 126/237 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA      M++ G+ P+ F YS+++ GFC  G ++ A  LF  M     + N VT+  LI
Sbjct: 98  EAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILI 157

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK + + E+  ++  M  KG+ P V TYN L  G     Q++ A KLF+ M     A
Sbjct: 158 DGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCA 217

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               +YN  I+G CK+G I EA  L   +        I  YS L+ G C++G+ + A EL
Sbjct: 218 PNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQEL 277

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +   GL+PN++TY+I++ G C  G +D+A +L   M+   + PN   +  L+ G
Sbjct: 278 LKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEG 334



 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 134/250 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G++P    ++TL+ G C   +I  A +LF  M   G   +V+TY+T+ING CK  +
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
              +L L  +M  KG +P VV YNT+   L +   V  A+  F EM    +  +  TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            + G C  G + EA  LF+ +           ++ LIDGLCK   +  AW +F+++   G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+V TYN ++ G+C+  QMD+A  LF  M+ KG APN  ++N L+ G  ++    +  
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 251 ELLHRMDERN 260
            LL  M  ++
Sbjct: 241 GLLAEMSHKS 250



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 124/236 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA +L ++M ++G  PN   Y+ LI+G C +G ID A+ L   M       ++ TY+T
Sbjct: 201 MDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYST 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C+    +E+  L  EM S G+ P ++TY+ +  GL +   ++ A +L   MQ S 
Sbjct: 261 LMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESK 320

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y   I+G+C  G +  A ELF  L V   +  +  Y+ +I GL K G    A 
Sbjct: 321 IEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEAC 380

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           ELF+ +   G +PN  TYN++I GF  +G    A  L  +M  KG + +  TF  L
Sbjct: 381 ELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 71/133 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M +  + PN F+Y+ LI+G C  G+++ ARELF ++ + G    VVTY  
Sbjct: 306 LDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTV 365

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K     E+  L+ EM   G  P   TYN +  G        +A++L +EM    
Sbjct: 366 MISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKG 425

Query: 121 VAAETSTYNTFID 133
            +A++ST+    D
Sbjct: 426 FSADSSTFRMLSD 438


>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 225

 Score =  199 bits (506), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 97/186 (52%), Positives = 131/186 (70%)

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           +NLY+EML  G RP   TY TL  GLF+  +V  A KLF  ++   ++A++  Y  F+DG
Sbjct: 1   MNLYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDG 60

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCKNG + EA E F  L+    +L IE+Y+CLIDGLCK GKLETAWELF+ L + GL  +
Sbjct: 61  LCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSD 120

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTYNIMIHGFC  GQ+DKA+ LF  ME  G  P+ +T+NTL+ G  ++N++ +VV+LLH
Sbjct: 121 VVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLH 180

Query: 255 RMDERN 260
           +M +R+
Sbjct: 181 KMIQRD 186



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 108/212 (50%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M+Q G RPNA  Y TL+ G   TG++  A++LF  +   G   +   Y   ++G C
Sbjct: 3   LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLC 62

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   + E++  ++++ S  I+  + +YN L  GL +  ++E A +LF+++    + ++  
Sbjct: 63  KNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVV 122

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G CK G + +A  LF  +    C   I  Y+ L+ G C+  K +   +L   +
Sbjct: 123 TYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  + P+ ++ NI+I     D +  +  DL 
Sbjct: 183 IQRDMSPDAISCNIVIDMLRKDEKYQECLDLL 214



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 65/113 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L + + Q G++ +   Y+ +I GFC  G++D+A  LF  M+ NGC  +++TYNT
Sbjct: 102 LETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNT 161

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           L+ G+C++   +E + L  +M+ + + P  ++ N +   L +  + +  L L 
Sbjct: 162 LLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQECLDLL 214



 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 43/87 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+ L + M + G  P+   Y+TL+ GFC + + D   +L   M       + ++ N 
Sbjct: 137 VDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNI 196

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR 87
           +I+   K +  +E L+L    L +  R
Sbjct: 197 VIDMLRKDEKYQECLDLLPRFLVQERR 223


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 102/258 (39%), Positives = 152/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  RL+DLM   GVRP+AF Y+ LI G+CLTG  D A ++F  M   G     VTYNTL+
Sbjct: 497 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 556

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC    ++++  L+ EML KG+ P VVTYNT+ HGLF+  +   A +L+  M +S   
Sbjct: 557 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 616

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ++GLCK+  + EA ++F++L     +L I  ++ +I  L K G+ E A +L
Sbjct: 617 CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 676

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++P  GL+PNVVTY ++      +G +++   LF  ME  G APN    N L+   + 
Sbjct: 677 FAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 736

Query: 243 NNETSKVVELLHRMDERN 260
             + S+    L ++DERN
Sbjct: 737 RGDISRAGAYLSKLDERN 754



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E    LDLM++ G+ P+  +++     +   G ID+A ++F  M  +G   NVV Y  
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 414

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V+++   +++M+++G+ P +V +N+L +GL  + + E A +L  EM    
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      +NT I  LC  G ++E   L   +  +       +Y+ LI G C  G+ + A 
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +  +GL P  VTYN ++HG+C+  ++D A+ LF +M  KGV P  VT+NT++ G 
Sbjct: 535 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594

Query: 241 IRNNETSKVVELLHRM 256
            +    S+  EL   M
Sbjct: 595 FQTKRFSEAKELYLNM 610



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 115/236 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  +   MI  G +PN + Y+ LI G+   G+     ++   M   G   +  TY +L
Sbjct: 251 DRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSL 310

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +N  CK     E+   +  M+ KGI+P V TY  L HG      +       D M  + +
Sbjct: 311 LNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGL 370

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +   +N F     K G I +A ++F  +R       +  Y  LID LCK+G+++ A  
Sbjct: 371 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV 430

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            F  +   G+ PN+V +N +++G C   + ++A +L  +M  +G+ PN V FNTL+
Sbjct: 431 KFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLI 486



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 36/276 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M Q G+ PN   Y  LID  C  G +D A   F  M   G   N+V +N+
Sbjct: 390 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 449

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C     E +  L  EML +GI P  V +NTL   L  + +V    +L D M+H  
Sbjct: 450 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 509

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +Y   I G C  G   EA ++F  +  +        Y+ L+ G C   +++ A+
Sbjct: 510 VRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 569

Query: 181 ELFQSLPRVGLMPNVVTYN-----------------------------------IMIHGF 205
            LF+ + R G+ P VVTYN                                   I+++G 
Sbjct: 570 CLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 629

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           C    +D+A  +F  + +KG+  N +TF T+M+G +
Sbjct: 630 CKSNCVDEAFKMFQSLCSKGLQLNIITF-TIMIGAL 664



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 7/258 (2%)

Query: 8   LDLMIQR----GVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DING--CMHNVVTYNT 60
           +D+++QR    G  P+   Y+ L+ G C     + A EL   M D +G  C  NVV+Y+ 
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+     V++  NL+ EM+ +GI P VVTY T+  GL +    + A  +F +M  + 
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  I G    G   E  ++   +     +     Y  L++ LCK G+   A 
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F S+ R G+ P V TY I+IHG+   G + + H     M   G++P+   FN      
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 241 IRNNETSKVVELLHRMDE 258
            +     K +++ ++M +
Sbjct: 385 AKCGMIDKAMDIFNKMRQ 402



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 116/282 (41%), Gaps = 39/282 (13%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELF-----------------------------VSM 46
           V PN   YS LI  FC  G ++     F                              +M
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 47  DI-------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR---PTVVTYNTL 96
           D+        GCM + V+Y  L+ G C  K  EE+L L   M     R   P VV+Y+ +
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
            +G F   QV+    LF EM    +  +  TY T IDGLCK      A  +F+ +     
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           +     Y+CLI G   IGK +   ++ + +   GL P+  TY  +++  C +G+  +A  
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            F  M  KG+ P   T+  L+ G       S++   L  M E
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVE 367



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 4/210 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK-L 112
           N+ TY+ LI  +C+   +E     +  +L  G R   +  N L  GL    +V  A+  L
Sbjct: 89  NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDG 169
              M       +T +Y   + GLC      EA EL   +      +C   + +YS +I+G
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
               G+++  + LF  +   G+ P+VVTY  +I G C     D+A  +F  M   G  PN
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             T+N L+ G +   +  +VV++L  M  R
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSAR 298



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 10/214 (4%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTK---DVEESLNLYSEML---SKGIRPT 89
           +D A +LF  +  +    +V  +N L+    + +     E +++ ++ M+   S  + P 
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 90  VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE-LF 148
           + TY+ L      +  +EH    F  +  +    +    N  + GLC    + EA + L 
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR---VGLMPNVVTYNIMIHGF 205
           + +  L C     +Y+ L+ GLC   + E A EL   +         PNVV+Y+I+I+GF
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +GQ+DK ++LFL+M  +G+ P+ VT+ T++ G
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDG 243



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 99/217 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+++GV P    Y+T++ G   T     A+EL+++M  +G   ++ TYN 
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK+  V+E+  ++  + SKG++  ++T+  +   L +  + E A+ LF  +  + 
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY    + L + G + E   LF  +         +  + L+  L   G +  A 
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 744

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
                L          T ++++  F +D     A  L
Sbjct: 745 AYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 100/256 (39%), Positives = 157/256 (61%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M ++G  PNA+ Y+ L+DG+CL  ++D A+++   M   GC   V +YN 
Sbjct: 318 VSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNI 377

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK + ++E+ +L  EM  K + P  VTY+TL  GL ++ + + AL LF EM  S 
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T +DGLCK+G++ EA +L ++++  K E  I  Y+ LI+G+   GKLE A 
Sbjct: 438 LLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAK 497

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  L   G+ P + TY IMI G   +G  D+A++LF  ME  G  PN  ++N ++ G 
Sbjct: 498 ELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGF 557

Query: 241 IRNNETSKVVELLHRM 256
           ++N ++S  + L+  M
Sbjct: 558 LQNQDSSTAIRLIDEM 573



 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 143/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M++RG +P+   YST+I+G C +G    A +L   M+  GC  N+V Y T
Sbjct: 178 IKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTT 237

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK   V ++++L SEM+ +GI P VVTY+T+ HG   +  +  A  LF+EM   +
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   T T+   +DGLCK G + EA  +F  +     E     Y+ L+DG C   +++ A 
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G  P V +YNI+I+G+C   ++D+A  L ++M  K + P+ VT++TLM G 
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417

Query: 241 IRNNETSKVVELLHRM 256
            +     + + L   M
Sbjct: 418 CQVGRPQEALNLFKEM 433



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 129/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++LD+M+ +G  P    Y+ LI+G+C    +D A+ L V M       + VTY+T
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYST 412

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+    +E+LNL+ EM S G+ P ++TY+TL  GL +   ++ ALKL   MQ S 
Sbjct: 413 LMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I+G+   G +  A ELF  L     +  I  Y+ +I GL K G  + A+
Sbjct: 473 IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAY 532

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ELF+ +   G +PN  +YN++I GF  +     A  L  +M  K  + +  TF  L+
Sbjct: 533 ELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 136/256 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M + G++P+A  ++TLI+G C+ GEI  A  LF  M   G   +V++Y+T+IN
Sbjct: 146 AISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVIN 205

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK+ +   +L L  +M  KG +P +V Y T+   L +   V  A+ L  EM    +  
Sbjct: 206 GLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY+T + G C  G++ EA  LF  +           ++ L+DGLCK G +  A  +F
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +++ + G  PN  TYN ++ G+C + QMD+A  +   M  KG AP   ++N L+ G  + 
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385

Query: 244 NETSKVVELLHRMDER 259
               +   LL  M E+
Sbjct: 386 RRLDEAKSLLVEMSEK 401



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  LL  M+ RG+ P+   YST++ GFC  G ++ A  LF  M     M N VT+  
Sbjct: 248 VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   V E+  ++  M  KG  P   TYN L  G    +Q++ A K+ D M    
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A    +YN  I+G CK   + EA  L   +   +       YS L+ GLC++G+ + A 
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEAL 427

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   GL+P+++TY+ ++ G C  G +D+A  L   M+   + P+ V +N L+ G 
Sbjct: 428 NLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGM 487

Query: 241 IRNNETSKVVELLHRM 256
               +     EL  ++
Sbjct: 488 FIAGKLEVAKELFSKL 503



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 136/255 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  M ++G +PN   Y+T+ID  C    ++ A +L   M   G   +VVTY+T+++
Sbjct: 216 ALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILH 275

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    + E+  L++EM+ + + P  VT+  L  GL +   V  A  +F+ M       
Sbjct: 276 GFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEP 335

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  +DG C N  + EA ++   +    C   + +Y+ LI+G CK  +L+ A  L 
Sbjct: 336 NAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLL 395

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +    L P+ VTY+ ++ G C  G+  +A +LF +M + G+ P+ +T++TL+ G  ++
Sbjct: 396 VEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKH 455

Query: 244 NETSKVVELLHRMDE 258
               + ++LL  M E
Sbjct: 456 GHLDEALKLLKSMQE 470



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M++   RP+   +   +       +      L   MD+ G  HNV + N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  C+   V  ++++  +M   GI+P  +T+NTL +G     +++ A+ LF+EM    
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y+T I+GLCK+G    A +L R +    C+  + AY+ +ID LCK   +  A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ P+VVTY+ ++HGFC+ G +++A  LF +M  + V PN VTF  L+ G 
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 241 IRNNETSKVVELLHRMDER 259
            +    S+   +   M ++
Sbjct: 313 CKEGMVSEARCVFEAMTKK 331



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 127/245 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  N +  + LI+  C    +  A  +   M   G   + +T+NTLING C   +++E+
Sbjct: 122 GVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEA 181

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L++EM+ +G +P V++Y+T+ +GL +      AL+L  +M+          Y T ID 
Sbjct: 182 VGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDS 241

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + +A +L   +        +  YS ++ G C +G L  A  LF  +    +MPN
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            VT+ I++ G C +G + +A  +F  M  KG  PN  T+N LM G   NN+  +  ++L 
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361

Query: 255 RMDER 259
            M ++
Sbjct: 362 IMVDK 366



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 70/133 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +LL  M +  + P+  +Y+ LI+G  + G+++ A+ELF  +  +G    + TY  
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G  K    +E+  L+ +M   G  P   +YN +  G  +      A++L DEM    
Sbjct: 518 MIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577

Query: 121 VAAETSTYNTFID 133
            +A++ST+   +D
Sbjct: 578 FSADSSTFQMLLD 590


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 157/259 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M++  V+P+   YSTL+DG+ L  E+ +A+ +F +M + G   +V TY  
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K V+E+LNL+ EM  K + P +VTY++L  GL +  ++ +   L DEM+   
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TY++ IDGLCKNG++  A  LF  ++  +    I  ++ L+DGLCK G+L+ A 
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+FQ L   G   NV TYN+MI+G C  G +++A  +   ME  G  PN  TF T+++  
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524

Query: 241 IRNNETSKVVELLHRMDER 259
            + +E  K  +LL +M  R
Sbjct: 525 FKKDENDKAEKLLRQMIAR 543



 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M  +G+  +   Y+TLI GFC+ G++  A  L   M +     NV TYN 
Sbjct: 215 VSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   V+E+ ++ + ML   ++P V+TY+TL  G F +++V+ A  +F+ M    
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   I+G CKN  + EA  LF+ +       GI  YS LIDGLCK G++   W
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G   +V+TY+ +I G C +G +D+A  LF  M+ + + PN  TF  L+ G 
Sbjct: 395 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454

Query: 241 IRNNETSKVVELLHRM 256
            +        E+   +
Sbjct: 455 CKGGRLKDAQEVFQDL 470



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A    D ++ +G + N   Y+TLI+G C  G+   A +    +D      +VV YNT
Sbjct: 145 VKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + V E+  L+SEM  KGI   VVTYNTL +G   + +++ A+ L +EM    
Sbjct: 205 IIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKT 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  +D LCK G + EA  +   +     +  +  YS L+DG   + +++ A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++  +G+ P+V TY I+I+GFC +  +D+A +LF +M  K + P  VT+++L+ G 
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   S V +L+  M +R
Sbjct: 385 CKSGRISYVWDLIDEMRDR 403



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 118/226 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M   GV P+   Y+ LI+GFC    +D A  LF  M     +  +VTY++
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+  +    +L  EM  +G    V+TY++L  GL +   ++ A+ LF++M+  +
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   +DGLCK G + +A E+F+ L      L +  Y+ +I+G CK G LE A 
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            +   +   G +PN  T+  +I       + DKA  L   M A+G+
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 122/243 (50%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G++P+    + LI+ FC  G+I     +   +   G   + VT NTLI G C    V++
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ + ++L++G +   V+Y TL +G+ +I     A+K   ++       +   YNT ID
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            +CK   + EA  LF  + V      +  Y+ LI G C +GKL+ A  L   +    + P
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV TYNI++   C +G++ +A  +   M    V P+ +T++TLM G     E  K   + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 254 HRM 256
           + M
Sbjct: 328 NAM 330



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 122/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P    ++ ++D F        A  L   +++ G   +++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    +    ++ +++L +G  P  VT NTL  GL    QV+ AL   D++    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y T I+G+CK G    A +  R +     +  +  Y+ +ID +CK   +  A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G+  +VVTYN +I+GFC  G++ +A  L  +M  K + PN  T+N L+   
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +   +L  M
Sbjct: 280 CKEGKVKEAKSVLAVM 295



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 97/192 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M Q+ + P    YS+LIDG C +G I    +L   M   G   +V+TY++
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSS 414

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   ++ ++ L+++M  + IRP + T+  L  GL +  +++ A ++F ++    
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  I+G CK G + EA  +   +    C      +  +I  L K  + + A 
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAE 534

Query: 181 ELFQSLPRVGLM 192
           +L + +   GL+
Sbjct: 535 KLLRQMIARGLL 546



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 70/158 (44%)

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
            I  V+ A+  F+ M           +N  +D   K  +   A  L   L +   +  + 
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             + LI+  C +G++   + +   + + G  P+ VT N +I G C  GQ+ KA      +
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            A+G   N V++ TL+ G  +  +T   ++ L ++D R
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGR 193


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 157/259 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M++  V+P+   YSTL+DG+ L  E+ +A+ +F +M + G   +V TY  
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K V+E+LNL+ EM  K + P +VTY++L  GL +  ++ +   L DEM+   
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRG 404

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TY++ IDGLCKNG++  A  LF  ++  +    I  ++ L+DGLCK G+L+ A 
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+FQ L   G   NV TYN+MI+G C  G +++A  +   ME  G  PN  TF T+++  
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524

Query: 241 IRNNETSKVVELLHRMDER 259
            + +E  K  +LL +M  R
Sbjct: 525 FKKDENDKAEKLLRQMIAR 543



 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M  +G+  +   YSTLI GFC+ G++  A  L   M +     NV TYN 
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   V+E+ ++ + ML   ++P V+TY+TL  G F +++V+ A  +F+ M    
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   I+G CKN  + EA  LF+ +       GI  YS LIDGLCK G++   W
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVW 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G   +V+TY+ +I G C +G +D+A  LF  M+ + + PN  TF  L+ G 
Sbjct: 395 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454

Query: 241 IRNNETSKVVELLHRM 256
            +        E+   +
Sbjct: 455 CKGGRLKDAQEVFQDL 470



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 139/251 (55%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + N   Y+TLI+G C  G+   A +L   +D      NV  Y+T+I+  CK 
Sbjct: 153 DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKY 212

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           + V E+  L+SEM  KGI   VVTY+TL +G     +++ A+ L +EM    +     TY
Sbjct: 213 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  +D LCK G + EA  +   +     +  +  YS L+DG   + +++ A  +F ++  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G+ P+V TY I+I+GFC +  +D+A +LF +M  K + P  VT+++L+ G  ++     
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392

Query: 249 VVELLHRMDER 259
           V +L+  M +R
Sbjct: 393 VWDLIDEMRDR 403



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 118/226 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M   GV P+   Y+ LI+GFC    +D A  LF  M     +  +VTY++
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+  +    +L  EM  +G    V+TY++L  GL +   ++ A+ LF++M+  +
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   +DGLCK G + +A E+F+ L      L +  Y+ +I+G CK G LE A 
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            +   +   G +PN  T+  +I       + DKA  L   M A+G+
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 121/243 (49%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G++P+    + LI+ FC  G+I     +   +   G   + VT NTLI G C    V++
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ + ++L++G +   V+Y TL +G+ +I     A+KL  ++           Y+T ID
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 207

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK   + EA  LF  + V      +  YS LI G C  GKL+ A  L   +    + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV TYNI++   C +G++ +A  +   M    V P+ +T++TLM G     E  K   + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 254 HRM 256
           + M
Sbjct: 328 NAM 330



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P    ++ ++D F        A  L   +++ G   +++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    +    ++ +++L +G  P  VT NTL  GL    QV+ AL   D++    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y T I+G+CK G    A +L R +     +  +E YS +ID LCK   +  A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G+  +VVTY+ +I+GFC +G++ +A  L  +M  K + PN  T+N L+   
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +   +L  M
Sbjct: 280 CKEGKVKEAKSVLAVM 295



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 97/192 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M Q+ + P    YS+LIDG C +G I    +L   M   G   +V+TY++
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSS 414

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   ++ ++ L+++M  + IRP + T+  L  GL +  +++ A ++F ++    
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  I+G CK G + EA  +   +    C      +  +I  L K  + + A 
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAE 534

Query: 181 ELFQSLPRVGLM 192
           +L + +   GL+
Sbjct: 535 KLLRQMIARGLL 546



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 71/158 (44%)

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
            I  V+ A+  F+ M           +N  +D   K  +   A  L   L +   +  + 
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             + LI+  C +G++   + +   + + G  P+ VT N +I G C  GQ+ KA      +
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            A+G   N V++ TL+ G  +  +T   ++LL ++D R
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR 193


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 145/254 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   MI RG+ P+   Y++LIDGFC    +D+A ++   M   GC  N+ T+N LI
Sbjct: 449 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 508

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +++ L L+ +M  +G+    VTYNTL  G  E+ ++  A +LF EM    V 
Sbjct: 509 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 568

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   +DGLC NG   +A E+F  +   K EL I  Y+ +I G+C   K++ AW+L
Sbjct: 569 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 628

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SLP  G+ P V TYNIMI G C  G + +A  LF  ME  G AP+  T+N L+   + 
Sbjct: 629 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 688

Query: 243 NNETSKVVELLHRM 256
           + + +K V+L+  +
Sbjct: 689 DGDATKSVKLIEEL 702



 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 145/257 (56%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+ ++LL  MI+R + PN   +S LID F   G++  A EL   M   G   + +TY +L
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   ++++  +   M+SKG  P + T+N L +G  + ++++  L+LF +M    V
Sbjct: 473 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 532

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A+T TYNT I G C+ G +  A ELF+ +   K    I  Y  L+DGLC  G+ E A E
Sbjct: 533 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 592

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + +  +  ++  YNI+IHG CN  ++D A DLF  +  KGV P   T+N ++ G  
Sbjct: 593 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 652

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   L  +M+E
Sbjct: 653 KKGPLSEAELLFRKMEE 669



 Score =  174 bits (440), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 145/255 (56%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M +R ++ +A  YS +IDG C  G +D A  LF  M++ G   N++TYN LI 
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 404

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C     ++   L  +M+ + I P VVT++ L     +  ++  A +L  EM H  +A 
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T TY + IDG CK  ++ +A ++   +    C+  I  ++ LI+G CK  +++   ELF
Sbjct: 465 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 524

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G++ + VTYN +I GFC  G+++ A +LF +M ++ V PN VT+  L+ G   N
Sbjct: 525 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 584

Query: 244 NETSKVVELLHRMDE 258
            E+ K +E+  ++++
Sbjct: 585 GESEKALEIFEKIEK 599



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 135/237 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A++++DLM+ +G  PN   ++ LI+G+C    ID   ELF  M + G + + VTYNT
Sbjct: 482 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 541

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   +  +  L+ EM+S+ + P +VTY  L  GL +  + E AL++F++++ S 
Sbjct: 542 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 601

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I G+C    + +A +LF +L +   + G++ Y+ +I GLCK G L  A 
Sbjct: 602 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 661

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ +   G  P+  TYNI+I     DG   K+  L  +++  G + +  T   ++
Sbjct: 662 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 133/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M++ G +P+    +TL++G CL+G+   A  L   M   GC  N VTY  
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  CK+     ++ L  +M  + I+   V Y+ +  GL +   +++A  LF+EM+   
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 391

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I G C  G   + A+L R +   K    +  +S LID   K GKL  A 
Sbjct: 392 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 451

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + +   G+ P+ +TY  +I GFC +  +DKA+ +   M +KG  PN  TFN L+ G 
Sbjct: 452 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 511

Query: 241 IRNNETSKVVELLHRMDER 259
            + N     +EL  +M  R
Sbjct: 512 CKANRIDDGLELFRKMSLR 530



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 135/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +I+ G  PN   +STLI+G CL G +  A EL   M   G   +++T NTL+NG C +  
Sbjct: 247 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 306

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             E++ L  +M+  G +P  VTY  + + + +  Q   A++L  +M+  ++  +   Y+ 
Sbjct: 307 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 366

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGLCK+G +  A  LF  + +      I  Y+ LI G C  G+ +   +L + + +  
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PNVVT++++I  F  +G++ +A +L  +M  +G+AP+ +T+ +L+ G  + N   K  
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486

Query: 251 ELLHRM 256
           +++  M
Sbjct: 487 QMVDLM 492



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 129/257 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M++ G +PNA  Y  +++  C +G+   A EL   M+      + V Y+ +I
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   ++ + NL++EM  KGI   ++TYN L  G     + +   KL  +M    + 
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  ID   K G + EA EL + +           Y+ LIDG CK   L+ A ++
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  PN+ T+NI+I+G+C   ++D   +LF  M  +GV  + VT+NTL+ G   
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548

Query: 243 NNETSKVVELLHRMDER 259
             + +   EL   M  R
Sbjct: 549 LGKLNVAKELFQEMVSR 565



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 12/252 (4%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM------HNVVTYNTLINGYCK 67
           +G+  N +  S +I+ FC      R R+L ++    G +       N +T++TLING C 
Sbjct: 215 KGIAHNLYTLSIMINCFC------RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 268

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              V E+L L   M+  G +P ++T NTL +GL    +   A+ L D+M          T
Sbjct: 269 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 328

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y   ++ +CK+G    A EL R +     +L    YS +IDGLCK G L+ A+ LF  + 
Sbjct: 329 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 388

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G+  N++TYNI+I GFCN G+ D    L  DM  + + PN VTF+ L+   ++  +  
Sbjct: 389 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 448

Query: 248 KVVELLHRMDER 259
           +  EL   M  R
Sbjct: 449 EAEELHKEMIHR 460



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 97/190 (51%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +++++L+ +M+     PTV+ ++ LF  + +  Q +  L L  +M+   +A    T + 
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+  C+   +  A      +  L  E     +S LI+GLC  G++  A EL   +  +G
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+++T N +++G C  G+  +A  L   M   G  PN VT+  ++    ++ +T+  +
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 251 ELLHRMDERN 260
           ELL +M+ERN
Sbjct: 347 ELLRKMEERN 356



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 63/167 (37%), Gaps = 35/167 (20%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE---------------------------- 35
           A  L   M+ R V PN   Y  L+DG C  GE                            
Sbjct: 555 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 614

Query: 36  -------IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
                  +D A +LF S+ + G    V TYN +I G CK   + E+  L+ +M   G  P
Sbjct: 615 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 674

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
              TYN L            ++KL +E++    + + ST    ID L
Sbjct: 675 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 159/259 (61%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L +M+++GV P+   YS+L+DG+CL  E+++A+ +F +M   G   +  +YN 
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING  K K V+E+L+L+ EM  KGI P  VTYN+L  GL ++ ++ +A +L DEM ++ 
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TYN+ ID LCKN +I +A  L + ++    +  +  Y+ LIDGLCK G+L+ A 
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++FQ L   G   N  TYNIMI+G C +G  ++A  L   ME  G+ P+ VT+ T++   
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524

Query: 241 IRNNETSKVVELLHRMDER 259
            R +E  K  +LL  M  R
Sbjct: 525 FRKDENEKAEKLLREMIIR 543



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA    D +I  G   +   Y TLI+G C  GE   A ++   ++      +VV YN 
Sbjct: 145 LKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNI 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK K V ++  LYSEM++K I P VVT+N+L  G   + Q++ A  LF EM   +
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T++  +D LCK+G I  A  +   +        +  YS L+DG C + ++  A 
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++ R+G+ P+  +YNIMI+G      +D+A  LF +M  KG+AP+ VT+N+L+ G 
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGL 384

Query: 241 IRNNETSKVVELLHRM 256
            +    S   +L+  M
Sbjct: 385 CKLGRISYAWQLVDEM 400



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 131/245 (53%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G+ P    ++ L++ +C  GE+  A  +F  +   G     +T+NTLING C    ++E
Sbjct: 88  KGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKE 147

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ +  +++ G     V+Y TL +GL +I +   AL++  +++   V  +   YN  I+
Sbjct: 148 ALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIIN 207

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK+  + +A +L+  +   +    +  ++ LI G C +G+L+ A+ LF  +    + P
Sbjct: 208 SLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINP 267

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +V T++I++   C DG + +A ++   M  +GV P+ VT+++LM G    NE +K   + 
Sbjct: 268 DVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVF 327

Query: 254 HRMDE 258
             M  
Sbjct: 328 STMSR 332



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 131/256 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++L  +  + V  +  +Y+ +I+  C    +  A +L+  M       +VVT+N+LI 
Sbjct: 183 ALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLIL 242

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    ++E+  L+ EM+ K I P V T++ L   L +   +  A  +   M    V  
Sbjct: 243 GFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIP 302

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY++ +DG C    + +A  +F T+  L       +Y+ +I+GL KI  ++ A  LF
Sbjct: 303 DVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLF 362

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ P+ VTYN +I G C  G++  A  L  +M   G+  + +T+N+L+    +N
Sbjct: 363 KEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKN 422

Query: 244 NETSKVVELLHRMDER 259
           +   K + L+ ++ ++
Sbjct: 423 HHIDKAIALVKKIKDQ 438



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 113/212 (53%)

Query: 45  SMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
            +++ G    +VT+N L+N YC   ++  + ++++++L  G  PT +T+NTL +G+    
Sbjct: 84  QLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNG 143

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +++ AL   D +       +  +Y T I+GLCK G    A ++ + +        +  Y+
Sbjct: 144 KLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYN 203

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +I+ LCK   +  A++L+  +    + P+VVT+N +I GFC  GQ+ +A  LF +M  K
Sbjct: 204 IIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK 263

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            + P+  TF+ L+    ++   ++   +L  M
Sbjct: 264 NINPDVYTFSILVDALCKDGNITRAKNMLAVM 295



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 2/209 (0%)

Query: 54  NVVTYNTLINGYCKTKD--VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           ++V +N ++    K  +     +++L  ++  KGI PT+VT+N L +    + ++  A  
Sbjct: 56  SIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFS 115

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           +F ++        T T+NT I+G+C NG + EA      +  L   L   +Y  LI+GLC
Sbjct: 116 IFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLC 175

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           KIG+   A ++ + +    +  +VV YNI+I+  C D  +  A+ L+ +M  K ++P+ V
Sbjct: 176 KIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVV 235

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TFN+L+LG     +  +   L H M  +N
Sbjct: 236 TFNSLILGFCVVGQLKEAFGLFHEMVLKN 264


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 150/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ L   MI RG+ PN   Y+TL+DG+C+   +  A  +   M  N C  ++VT+ +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC  K V++ + ++  +  +G+    VTY+ L  G  +  +++ A +LF EM    
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   +DGLC NG + +A E+F  L+  K +LGI  Y+ +I+G+CK GK+E AW
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF SLP  G+ PNV+TY +MI G C  G + +A+ L   ME  G APN  T+NTL+   
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 241 IRNNETSKVVELLHRM 256
           +R+ + +   +L+  M
Sbjct: 554 LRDGDLTASAKLIEEM 569



 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 139/252 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M +R V+ + F YST+ID  C  G ID A  LF  M+  G   +VVTYN+L+ G C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K     +   L  +M+S+ I P V+T+N L     +  +++ A +L+ EM    ++    
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT +DG C    + EA  +   +   KC   I  ++ LI G C + +++   ++F+++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL+ N VTY+I++ GFC  G++  A +LF +M + GV P+ +T+  L+ G   N + 
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 247 SKVVELLHRMDE 258
            K +E+   + +
Sbjct: 455 EKALEIFEDLQK 466



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 137/257 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++ + LL  M+ R + PN   ++ L+D F   G++  A EL+  M   G   N++TYNTL
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC    + E+ N+   M+     P +VT+ +L  G   + +V+  +K+F  +    +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A   TY+  + G C++G I  A ELF+ +        +  Y  L+DGLC  GKLE A E
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ L +  +   +V Y  +I G C  G+++ A +LF  +  KGV PN +T+  ++ G  
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   LL +M+E
Sbjct: 520 KKGSLSEANILLRKMEE 536



 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 129/229 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ +LDLM++    P+   +++LI G+C+   +D   ++F ++   G + N VTY+ 
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++  ++ +  L+ EM+S G+ P V+TY  L  GL +  ++E AL++F+++Q S 
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y T I+G+CK G + +A  LF +L     +  +  Y+ +I GLCK G L  A 
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L + +   G  PN  TYN +I     DG +  +  L  +M++ G + +
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 132/236 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  +++ G  P+   ++TLI G  L G++  A  L   M  NGC  +VVTYN+++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C++ D   +L+L  +M  + ++  V TY+T+   L     ++ A+ LF EM+   + +
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ + GLCK G   + A L + +   +    +  ++ L+D   K GKL+ A EL+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + +   G+ PN++TYN ++ G+C   ++ +A+++   M     +P+ VTF +L+ G
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 137/244 (56%), Gaps = 3/244 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N +  + +I+ FC   +   A  +   +   G   +  T+NTLI G      V E+
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L   M+  G +P VVTYN++ +G+        AL L  +M+  +V A+  TY+T ID 
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC++G I  A  LF+ +     +  +  Y+ L+ GLCK GK      L + +    ++PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
           V+T+N+++  F  +G++ +A++L+ +M  +G++PN +T+NTLM G C++N  +E + +++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 252 LLHR 255
           L+ R
Sbjct: 358 LMVR 361



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 128/258 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   MI+    P+   +S        T + +   +    +++NG  HN+ T N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +C+      + ++  +++  G  P   T+NTL  GLF   +V  A+ L D M  +  
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ ++G+C++G    A +L R +     +  +  YS +ID LC+ G ++ A  
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+ +   G+  +VVTYN ++ G C  G+ +    L  DM ++ + PN +TFN L+   +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  +  EL   M  R
Sbjct: 310 KEGKLQEANELYKEMITR 327



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 2/161 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M+  GV P+   Y  L+DG C  G++++A E+F  +  +     +V Y T+I 
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   VE++ NL+  +  KG++P V+TY  +  GL +   +  A  L  +M+    A 
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
              TYNT I    ++G +  +A+L   ++   C    +A S
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMK--SCGFSADASS 580



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 59/114 (51%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           +Y+T+I+G C  G+++ A  LF S+   G   NV+TY  +I+G CK   + E+  L  +M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
              G  P   TYNTL         +  + KL +EM+    +A+ S+    ID L
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 1/165 (0%)

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L  G+ +I + + A+ LF EM  S        ++ F   + +        +  + L +  
Sbjct: 60  LRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
               I   + +I+  C+  K   A+ +   + ++G  P+  T+N +I G   +G++ +A 
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            L   M   G  P+ VT+N+++ G  R+ +TS  ++LL +M+ERN
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/257 (39%), Positives = 153/257 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+ ++M + GV P+A+ YS L+DG+CL  ++D A++LF  M   G   +V  YN LI
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILI 358

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK++ + E+  L SEM  + + P  VTY+TL  G  +  + + A KLF EM    + 
Sbjct: 359 NGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLL 418

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            ++ TY+  +DGLCK+G++ EA  L + ++  K E  I  Y+ LI G+C  GKLE A EL
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAREL 478

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   G+ P+VVTY +MI G   +G  ++A ++F  M   G  PN  T+N  + G +R
Sbjct: 479 FSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLR 538

Query: 243 NNETSKVVELLHRMDER 259
           N + S  V L+  M  R
Sbjct: 539 NGDPSNAVRLIEEMVGR 555



 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 137/254 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L D + + G  P+   Y+T+I G C  G    A +L   M+  GC  +VV YNT+I
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK +   E++  +SEM+ +GI P VVTY+++ HG   + Q+  A  LF +M   +V 
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T T+   +DGLCK G I+EA  +F  +     E     YS L+DG C   +++ A +L
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G  P+V  YNI+I+G C   ++++A  L  +M  + + P+ VT++TLM G  +
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398

Query: 243 NNETSKVVELLHRM 256
                   +L   M
Sbjct: 399 AGRPQVAQKLFKEM 412



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 43/294 (14%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV----- 56
           +EA      M+ +G+ PN   YS+++ GFC  G+++ A  LF  M     M N V     
Sbjct: 228 NEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTIL 287

Query: 57  ------------------------------TYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                                         TY+ L++GYC    ++E+  L+  M+ KG 
Sbjct: 288 VDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P+V  YN L +G  +  ++  A  L  EM   D+  +T TY+T + G C+ G    A +
Sbjct: 348 APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQK 407

Query: 147 LFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           LF+ +    C  G+      YS L+DGLCK G L+ A+ L +++    + P++  YNI+I
Sbjct: 408 LFKEM----CSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G CN G+++ A +LF ++  KG+ P+ VT+  ++ G ++   +++  E+  +M
Sbjct: 464 QGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKM 517



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 123/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA +L D+M+ +G  P+  VY+ LI+G C +  ++ A+ L   M       + VTY+T
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C+    + +  L+ EM S G+ P  +TY+ L  GL +   ++ A +L   MQ S 
Sbjct: 392 LMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK 451

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      YN  I G+C  G +  A ELF  L V   +  +  Y+ +I GL K G    A 
Sbjct: 452 IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEAC 511

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E+F+ +   G +PN  TYN+ I GF  +G    A  L  +M  +G + +  TF  L+
Sbjct: 512 EMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 129/257 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A   L  M + G++P    + TL++G C   +I  A +LF  +   G   +++TY T+I 
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIK 184

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK      +L L  +M  KG +P VV YNT+   L +  +   A+  F EM    +  
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY++ + G C  G + EA  LF+ +           ++ L+DGLCK G +  A  +F
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ P+  TY+ ++ G+C   QMD+A  LF  M  KG AP+   +N L+ G  ++
Sbjct: 305 EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKS 364

Query: 244 NETSKVVELLHRMDERN 260
              ++   LL  M +R+
Sbjct: 365 RRLNEAKTLLSEMYDRD 381



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 124/246 (50%), Gaps = 7/246 (2%)

Query: 15  GVRP--NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK--D 70
           G+RP     V++ L+              L   MD++    NV T   LIN  C +    
Sbjct: 62  GIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDH 121

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V  + +   +M   G++PT VT+ TL +GL    ++  A+KLFDE+     A    TY T
Sbjct: 122 VHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTT 181

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I GLCK G+   A +L + +    C+  + AY+ +ID LCK  +   A   F  +   G
Sbjct: 182 IIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG 241

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN---ETS 247
           + PNVVTY+ ++HGFCN GQ+++A  LF  M  + V PN VTF  L+ G  +     E  
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEAR 301

Query: 248 KVVELL 253
           +V E++
Sbjct: 302 RVFEMM 307


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 150/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ L   MI RG+ PN   Y+TL+DG+C+   +  A  +   M  N C  ++VT+ +
Sbjct: 304 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 363

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC  K V++ + ++  +  +G+    VTY+ L  G  +  +++ A +LF EM    
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   +DGLC NG + +A E+F  L+  K +LGI  Y+ +I+G+CK GK+E AW
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF SLP  G+ PNV+TY +MI G C  G + +A+ L   ME  G APN  T+NTL+   
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543

Query: 241 IRNNETSKVVELLHRM 256
           +R+ + +   +L+  M
Sbjct: 544 LRDGDLTASAKLIEEM 559



 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 139/252 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M +R V+ + F YST+ID  C  G ID A  LF  M+  G   +VVTYN+L+ G C
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K     +   L  +M+S+ I P V+T+N L     +  +++ A +L+ EM    ++    
Sbjct: 265 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 324

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT +DG C    + EA  +   +   KC   I  ++ LI G C + +++   ++F+++
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 384

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL+ N VTY+I++ GFC  G++  A +LF +M + GV P+ +T+  L+ G   N + 
Sbjct: 385 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 444

Query: 247 SKVVELLHRMDE 258
            K +E+   + +
Sbjct: 445 EKALEIFEDLQK 456



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 137/257 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++ + LL  M+ R + PN   ++ L+D F   G++  A EL+  M   G   N++TYNTL
Sbjct: 270 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 329

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC    + E+ N+   M+     P +VT+ +L  G   + +V+  +K+F  +    +
Sbjct: 330 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 389

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A   TY+  + G C++G I  A ELF+ +        +  Y  L+DGLC  GKLE A E
Sbjct: 390 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 449

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ L +  +   +V Y  +I G C  G+++ A +LF  +  KGV PN +T+  ++ G  
Sbjct: 450 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 509

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   LL +M+E
Sbjct: 510 KKGSLSEANILLRKMEE 526



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 132/237 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ +LDLM++    P+   +++LI G+C+   +D   ++F ++   G + N VTY+ 
Sbjct: 339 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 398

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++  ++ +  L+ EM+S G+ P V+TY  L  GL +  ++E AL++F+++Q S 
Sbjct: 399 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 458

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y T I+G+CK G + +A  LF +L     +  +  Y+ +I GLCK G L  A 
Sbjct: 459 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 518

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L + +   G  PN  TYN +I     DG +  +  L  +M++ G + +  +   ++
Sbjct: 519 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 132/236 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  +++ G  P+   ++TLI G  L G++  A  L   M  NGC  +VVTYN+++N
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C++ D   +L+L  +M  + ++  V TY+T+   L     ++ A+ LF EM+   + +
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ + GLCK G   + A L + +   +    +  ++ L+D   K GKL+ A EL+
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + +   G+ PN++TYN ++ G+C   ++ +A+++   M     +P+ VTF +L+ G
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 367



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 137/244 (56%), Gaps = 3/244 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N +  + +I+ FC   +   A  +   +   G   +  T+NTLI G      V E+
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L   M+  G +P VVTYN++ +G+        AL L  +M+  +V A+  TY+T ID 
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC++G I  A  LF+ +     +  +  Y+ L+ GLCK GK      L + +    ++PN
Sbjct: 228 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
           V+T+N+++  F  +G++ +A++L+ +M  +G++PN +T+NTLM G C++N  +E + +++
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 347

Query: 252 LLHR 255
           L+ R
Sbjct: 348 LMVR 351



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 128/258 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   MI+    P+   +S        T + +   +    +++NG  HN+ T N +
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +C+      + ++  +++  G  P   T+NTL  GLF   +V  A+ L D M  +  
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ ++G+C++G    A +L R +     +  +  YS +ID LC+ G ++ A  
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+ +   G+  +VVTYN ++ G C  G+ +    L  DM ++ + PN +TFN L+   +
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  +  EL   M  R
Sbjct: 300 KEGKLQEANELYKEMITR 317



 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 59/114 (51%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           +Y+T+I+G C  G+++ A  LF S+   G   NV+TY  +I+G CK   + E+  L  +M
Sbjct: 465 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 524

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
              G  P   TYNTL         +  + KL +EM+    +A+ S+    ID L
Sbjct: 525 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 1/165 (0%)

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L  G+ +I + + A+ LF EM  S        ++ F   + +        +  + L +  
Sbjct: 50  LRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 108

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
               I   + +I+  C+  K   A+ +   + ++G  P+  T+N +I G   +G++ +A 
Sbjct: 109 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 168

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            L   M   G  P+ VT+N+++ G  R+ +TS  ++LL +M+ERN
Sbjct: 169 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 213



 Score = 44.7 bits (104), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 26/47 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING 50
           A  L   MIQRG+ PN   YS+LIDGFC    +D A ++   M   G
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764



 Score = 43.9 bits (102), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 26/251 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ LL  M + G  PN   Y+TLI      G++  + +L   M   G   +  +   
Sbjct: 514 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 573

Query: 61  LIN-----------GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH-----GLFEIH 104
           +I+            YC +K  +   +L     S+ IR + +T+  +F          ++
Sbjct: 574 VIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVN 633

Query: 105 QVE----HALKLFDEMQHSDVAAETSTY-NTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
            +E    ++ +L  +++    ++    + N  +  L  N  +    E      ++  EL 
Sbjct: 634 TIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELP 693

Query: 160 IEA--YSCLIDGLCKIGK---LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            +A  Y+     + + G+   + TA EL + + + G+ PN +TY+ +I GFC + ++D+A
Sbjct: 694 TDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEA 753

Query: 215 HDLFLDMEAKG 225
           + +   M  KG
Sbjct: 754 NQMLDLMVTKG 764


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/257 (39%), Positives = 152/257 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + + MI++GV PN   Y+ L+DG+C   ++D A++LF  M   GC  +V +YN LI
Sbjct: 205 EAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILI 264

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK+  ++E+  L +EM  K + P  VTY+TL  G  +  + + A KL +EM+   + 
Sbjct: 265 KGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLL 324

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DGLCK G++ EA EL + ++  K E  I  Y+ LI G+C  GKLE A EL
Sbjct: 325 PDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAREL 384

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   G+ P+VVTY +MI G    G  ++A +LF DM   G  PN  T+N ++ G +R
Sbjct: 385 FSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLR 444

Query: 243 NNETSKVVELLHRMDER 259
           N +TS    L+  M  R
Sbjct: 445 NGDTSNAGRLIEEMVGR 461



 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 146/254 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L D M++ G  P+   YST+I+G C  G    A +L   M+  GC  NVV Y+T+I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K + E++   SEM+++GI P VVTY+++ HG   + +   A  LF +M   +V 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T T+N  +DGL K G I+EA  +F T+     E  +  Y+ L+DG C   +++ A +L
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + R G  P+V +YNI+I G C  G++D+A  L  +M  K + P+ VT++TLM G  +
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 243 NNETSKVVELLHRM 256
           +       +LL  M
Sbjct: 305 DGRPQDAQKLLEEM 318



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 133/255 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  M ++G +PN  VYST+ID  C    I  A E    M   G   NVVTY+++++
Sbjct: 101 AIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILH 160

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C      E+ +L+ +M+ + + P  VT+N L  GL +   +  A  +F+ M    V  
Sbjct: 161 GFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEP 220

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             +TYN  +DG C    + EA +LF  +    C   + +Y+ LI G CK G+++ A  L 
Sbjct: 221 NVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLL 280

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +    L P+ VTY+ ++ GFC DG+   A  L  +M + G+ P+ +T++ ++ G  + 
Sbjct: 281 AEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQ 340

Query: 244 NETSKVVELLHRMDE 258
               +  ELL  M E
Sbjct: 341 GHLDEAFELLKAMQE 355



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 123/236 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA +L ++M+++G  P+   Y+ LI G C +G ID A+ L   M       + VTY+T
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C+    +++  L  EM S G+ P ++TY+ +  GL +   ++ A +L   MQ S 
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK 357

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y   I G+C  G +  A ELF  L V   +  +  Y+ +I GL K G    A 
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           ELF+ +   G +PN  TYN++I GF  +G    A  L  +M  +G + +  TF  L
Sbjct: 418 ELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 124/243 (51%), Gaps = 2/243 (0%)

Query: 16  VRPNAFVYSTLIDGFCLTGE--IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +RP+ +  + LI+ FC +       A  +  +M   G   N VT++TL+NG      + +
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           ++ L+ EM+  G  P V+TY+T+ +GL ++     A++L  +M+          Y+T ID
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK+  I EA E    +        +  YS ++ G C +G+   A  LF+ +    +MP
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           + VT+NI++ G   +G + +A  +F  M  KGV PN  T+N LM G    ++  +  +L 
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 254 HRM 256
           + M
Sbjct: 246 NIM 248



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 70/133 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M +  + PN F+Y+ LI G C  G+++ ARELF ++ + G   +VVTY  
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K     E+  L+ +M   G  P   TYN +  G        +A +L +EM    
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462

Query: 121 VAAETSTYNTFID 133
            +A++ST+    D
Sbjct: 463 FSADSSTFQMLSD 475



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 2/177 (1%)

Query: 86  IRPTVVTYNTLFHGLFEIHQ--VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           IRP V T   L +     +      A  +   M    +     T++T ++GL     I++
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A +LF  +  +  E  +  YS +I+GLCK+G    A +L + +   G  PNVV Y+ +I 
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             C D  + +A +   +M  +G++PN VT+++++ G      +++   L  +M ERN
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  197 bits (502), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 101/256 (39%), Positives = 146/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   MI RG+ P+   Y++LIDGFC    +D+A ++   M   GC  N+ T+N 
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK   +++ L L+ +M  +G+    VTYNTL  G  E+ ++  A +LF EM    
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   +DGLC NG   +A E+F  +   K EL I  Y+ +I G+C   K++ AW
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF SLP  G+ P V TYNIMI G C  G + +A  LF  ME  G AP+  T+N L+   
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588

Query: 241 IRNNETSKVVELLHRM 256
           + + + +K V+L+  +
Sbjct: 589 LGDGDATKSVKLIEEL 604



 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 145/257 (56%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+ ++LL  MI+R + PN   +S LID F   G++  A EL   M   G   + +TY +L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   ++++  +   M+SKG  P + T+N L +G  + ++++  L+LF +M    V
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A+T TYNT I G C+ G +  A ELF+ +   K    I  Y  L+DGLC  G+ E A E
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + +  +  ++  YNI+IHG CN  ++D A DLF  +  KGV P   T+N ++ G  
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   L  +M+E
Sbjct: 555 KKGPLSEAELLFRKMEE 571



 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 145/255 (56%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M +R ++ +A  YS +IDG C  G +D A  LF  M++ G   N++TYN LI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C     ++   L  +M+ + I P VVT++ L     +  ++  A +L  EM H  +A 
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T TY + IDG CK  ++ +A ++   +    C+  I  ++ LI+G CK  +++   ELF
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G++ + VTYN +I GFC  G+++ A +LF +M ++ V PN VT+  L+ G   N
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486

Query: 244 NETSKVVELLHRMDE 258
            E+ K +E+  ++++
Sbjct: 487 GESEKALEIFEKIEK 501



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 135/237 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A++++DLM+ +G  PN   ++ LI+G+C    ID   ELF  M + G + + VTYNT
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   +  +  L+ EM+S+ + P +VTY  L  GL +  + E AL++F++++ S 
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I G+C    + +A +LF +L +   + G++ Y+ +I GLCK G L  A 
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ +   G  P+  TYNI+I     DG   K+  L  +++  G + +  T   ++
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 133/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M++ G +P+    +TL++G CL+G+   A  L   M   GC  N VTY  
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  CK+     ++ L  +M  + I+   V Y+ +  GL +   +++A  LF+EM+   
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I G C  G   + A+L R +   K    +  +S LID   K GKL  A 
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + +   G+ P+ +TY  +I GFC +  +DKA+ +   M +KG  PN  TFN L+ G 
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413

Query: 241 IRNNETSKVVELLHRMDER 259
            + N     +EL  +M  R
Sbjct: 414 CKANRIDDGLELFRKMSLR 432



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 135/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +I+ G  PN   +STLI+G CL G +  A EL   M   G   +++T NTL+NG C +  
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             E++ L  +M+  G +P  VTY  + + + +  Q   A++L  +M+  ++  +   Y+ 
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGLCK+G +  A  LF  + +      I  Y+ LI G C  G+ +   +L + + +  
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PNVVT++++I  F  +G++ +A +L  +M  +G+AP+ +T+ +L+ G  + N   K  
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388

Query: 251 ELLHRM 256
           +++  M
Sbjct: 389 QMVDLM 394



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 12/252 (4%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM------HNVVTYNTLINGYCK 67
           +G+  N +  S +I+ FC      R R+L ++    G +       N +T++TLING C 
Sbjct: 117 KGIAHNLYTLSIMINCFC------RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 170

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              V E+L L   M+  G +P ++T NTL +GL    +   A+ L D+M          T
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y   ++ +CK+G    A EL R +     +L    YS +IDGLCK G L+ A+ LF  + 
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G+  N++TYNI+I GFCN G+ D    L  DM  + + PN VTF+ L+   ++  +  
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350

Query: 248 KVVELLHRMDER 259
           +  EL   M  R
Sbjct: 351 EAEELHKEMIHR 362



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 129/258 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M++ G +PNA  Y  +++  C +G+   A EL   M+      + V Y+ +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   ++ + NL++EM  KGI   ++TYN L  G     + +   KL  +M    + 
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  ID   K G + EA EL + +           Y+ LIDG CK   L+ A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  PN+ T+NI+I+G+C   ++D   +LF  M  +GV  + VT+NTL+ G   
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450

Query: 243 NNETSKVVELLHRMDERN 260
             + +   EL   M  R 
Sbjct: 451 LGKLNVAKELFQEMVSRK 468



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 97/190 (51%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +++++L+ +M+     PTV+ ++ LF  + +  Q +  L L  +M+   +A    T + 
Sbjct: 69  ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+  C+   +  A      +  L  E     +S LI+GLC  G++  A EL   +  +G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+++T N +++G C  G+  +A  L   M   G  PN VT+  ++    ++ +T+  +
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248

Query: 251 ELLHRMDERN 260
           ELL +M+ERN
Sbjct: 249 ELLRKMEERN 258



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 35/170 (20%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE------------------------- 35
           ++ A  L   M+ R V PN   Y  L+DG C  GE                         
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513

Query: 36  ----------IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                     +D A +LF S+ + G    V TYN +I G CK   + E+  L+ +M   G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
             P   TYN L            ++KL +E++    + + ST    ID L
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 150/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ L   MI RG+ PN   Y+TL+DG+C+   +  A  +   M  N C  ++VT+ +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC  K V++ + ++  +  +G+    VTY+ L  G  +  +++ A +LF EM    
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   +DGLC NG + +A E+F  L+  K +LGI  Y+ +I+G+CK GK+E AW
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF SLP  G+ PNV+TY +MI G C  G + +A+ L   ME  G APN  T+NTL+   
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 241 IRNNETSKVVELLHRM 256
           +R+ + +   +L+  M
Sbjct: 554 LRDGDLTASAKLIEEM 569



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 139/252 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M +R V+ + F YST+ID  C  G ID A  LF  M+  G   +VVTYN+L+ G C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K     +   L  +M+S+ I P V+T+N L     +  +++ A +L+ EM    ++    
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT +DG C    + EA  +   +   KC   I  ++ LI G C + +++   ++F+++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL+ N VTY+I++ GFC  G++  A +LF +M + GV P+ +T+  L+ G   N + 
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 247 SKVVELLHRMDE 258
            K +E+   + +
Sbjct: 455 EKALEIFEDLQK 466



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 137/257 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++ + LL  M+ R + PN   ++ L+D F   G++  A EL+  M   G   N++TYNTL
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC    + E+ N+   M+     P +VT+ +L  G   + +V+  +K+F  +    +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A   TY+  + G C++G I  A ELF+ +        +  Y  L+DGLC  GKLE A E
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ L +  +   +V Y  +I G C  G+++ A +LF  +  KGV PN +T+  ++ G  
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   LL +M+E
Sbjct: 520 KKGSLSEANILLRKMEE 536



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 129/229 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ +LDLM++    P+   +++LI G+C+   +D   ++F ++   G + N VTY+ 
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++  ++ +  L+ EM+S G+ P V+TY  L  GL +  ++E AL++F+++Q S 
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y T I+G+CK G + +A  LF +L     +  +  Y+ +I GLCK G L  A 
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L + +   G  PN  TYN +I     DG +  +  L  +M++ G + +
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 132/236 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  +++ G  P+   ++TLI G  L G++  A  L   M  NGC  +VVTYN+++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C++ D   +L+L  +M  + ++  V TY+T+   L     ++ A+ LF EM+   + +
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ + GLCK G   + A L + +   +    +  ++ L+D   K GKL+ A EL+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + +   G+ PN++TYN ++ G+C   ++ +A+++   M     +P+ VTF +L+ G
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 137/244 (56%), Gaps = 3/244 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N +  + +I+ FC   +   A  +   +   G   +  T+NTLI G      V E+
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L   M+  G +P VVTYN++ +G+        AL L  +M+  +V A+  TY+T ID 
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC++G I  A  LF+ +     +  +  Y+ L+ GLCK GK      L + +    ++PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
           V+T+N+++  F  +G++ +A++L+ +M  +G++PN +T+NTLM G C++N  +E + +++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 252 LLHR 255
           L+ R
Sbjct: 358 LMVR 361



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 128/258 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   MI+    P+   +S        T + +   +    +++NG  HN+ T N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +C+      + ++  +++  G  P   T+NTL  GLF   +V  A+ L D M  +  
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ ++G+C++G    A +L R +     +  +  YS +ID LC+ G ++ A  
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+ +   G+  +VVTYN ++ G C  G+ +    L  DM ++ + PN +TFN L+   +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  +  EL   M  R
Sbjct: 310 KEGKLQEANELYKEMITR 327



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 2/161 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M+  GV P+   Y  L+DG C  G++++A E+F  +  +     +V Y T+I 
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   VE++ NL+  +  KG++P V+TY  +  GL +   +  A  L  +M+    A 
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
              TYNT I    ++G +  +A+L   ++   C    +A S
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMK--SCGFSADASS 580



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 1/165 (0%)

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L  G+ +I + + A+ LF EM  S        ++ F   + +        +  + L +  
Sbjct: 60  LRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
               I   + +I+  C+  K   A+ +   + ++G  P+  T+N +I G   +G++ +A 
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            L   M   G  P+ VT+N+++ G  R+ +TS  ++LL +M+ERN
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 150/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ L   MI RG+ PN   Y+TL+DG+C+   +  A  +   M  N C  ++VT+ +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC  K V++ + ++  +  +G+    VTY+ L  G  +  +++ A +LF EM    
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   +DGLC NG + +A E+F  L+  K +LGI  Y+ +I+G+CK GK+E AW
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF SLP  G+ PNV+TY +MI G C  G + +A+ L   ME  G APN  T+NTL+   
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 241 IRNNETSKVVELLHRM 256
           +R+ + +   +L+  M
Sbjct: 554 LRDGDLTASAKLIEEM 569



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 140/255 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M +R V+ + F YST+ID  C  G ID A  LF  M+  G   +VVTYN+L+ 
Sbjct: 212 AFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK     +   L  +M+S+ I P V+T+N L     +  +++ A +L+ EM    ++ 
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYNT +DG C    + EA  +   +   KC   I  ++ LI G C + +++   ++F
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +++ + GL+ N VTY+I++ GFC  G++  A +LF +M + GV P+ +T+  L+ G   N
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451

Query: 244 NETSKVVELLHRMDE 258
            +  K +E+   + +
Sbjct: 452 GKLEKALEIFEDLQK 466



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 137/257 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++ + LL  M+ R + PN   ++ L+D F   G++  A EL+  M   G   N++TYNTL
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC    + E+ N+   M+     P +VT+ +L  G   + +V+  +K+F  +    +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A   TY+  + G C++G I  A ELF+ +        +  Y  L+DGLC  GKLE A E
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ L +  +   +V Y  +I G C  G+++ A +LF  +  KGV PN +T+  ++ G  
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   LL +M+E
Sbjct: 520 KKGSLSEANILLRKMEE 536



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 129/229 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ +LDLM++    P+   +++LI G+C+   +D   ++F ++   G + N VTY+ 
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++  ++ +  L+ EM+S G+ P V+TY  L  GL +  ++E AL++F+++Q S 
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y T I+G+CK G + +A  LF +L     +  +  Y+ +I GLCK G L  A 
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L + +   G  PN  TYN +I     DG +  +  L  +M++ G + +
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577



 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 134/236 (56%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  +++ G  P+   ++TLI+G CL G++ +A  L   M  NGC  ++VTYN+++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C++ D   + ++  +M  + ++  V TY+T+   L     ++ A+ LF EM+   + +
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ + GLCK G   + A L + +   +    +  ++ L+D   K GKL+ A EL+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + +   G+ PN++TYN ++ G+C   ++ +A+++   M     +P+ VTF +L+ G
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 138/244 (56%), Gaps = 3/244 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N +  + +I+ FC   +   A  +   +   G   +  T+NTLING C    V ++
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L   M+  G +P +VTYN++ +G+        A  +  +M+  +V A+  TY+T ID 
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC++G I  A  LF+ +     +  +  Y+ L+ GLCK GK      L + +    ++PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
           V+T+N+++  F  +G++ +A++L+ +M  +G++PN +T+NTLM G C++N  +E + +++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 252 LLHR 255
           L+ R
Sbjct: 358 LMVR 361



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 127/258 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   MI+    P    +S        T + +   +    +++NG  HN+ T N +
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +C+      + ++  +++  G  P   T+NTL +GL    +V  A+ L D M  +  
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ ++G+C++G    A ++ R +     +  +  YS +ID LC+ G ++ A  
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+ +   G+  +VVTYN ++ G C  G+ +    L  DM ++ + PN +TFN L+   +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  +  EL   M  R
Sbjct: 310 KEGKLQEANELYKEMITR 327



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 2/161 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M+  GV P+   Y  L+DG C  G++++A E+F  +  +     +V Y T+I 
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   VE++ NL+  +  KG++P V+TY  +  GL +   +  A  L  +M+    A 
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
              TYNT I    ++G +  +A+L   ++   C    +A S
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMK--SCGFSADASS 580



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 1/165 (0%)

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L  G+ +I + + A+ LF EM  S        ++ F   + +        +  + L +  
Sbjct: 60  LRSGIVDIKK-DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
               I   + +I+  C+  K   A+ +   + ++G  P+  T+N +I+G C +G++ KA 
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAV 178

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            L   M   G  P+ VT+N+++ G  R+ +TS   ++L +M+ERN
Sbjct: 179 VLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN 223


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  197 bits (501), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 101/258 (39%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  RL+DLM   GVRP+AF Y+ LI G+CL G  D A ++F  M   G     VTYNTL+
Sbjct: 432 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 491

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC    ++++  L+ EML KG+ P VVTYNT+ HGLF+  +   A +L+  M +S   
Sbjct: 492 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 551

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ++GLCK+  + EA ++F++L     +L I  ++ +I  L K G+ E A +L
Sbjct: 552 CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 611

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++P  GL+PNVVTY ++      +G +++   LF  ME  G APN    N L+   + 
Sbjct: 612 FAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 671

Query: 243 NNETSKVVELLHRMDERN 260
             + S+    L ++DERN
Sbjct: 672 RGDISRAGAYLSKLDERN 689



 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E    LDLM++ G+ P+  +++     +   G ID+A ++F  M  +G   NVV Y  
Sbjct: 290 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 349

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V+++   +++M+++G+ P +V +N+L +GL  + + E A +L  EM    
Sbjct: 350 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 409

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      +NT I  LC  G ++E   L   +  +       +Y+ LI G C  G+ + A 
Sbjct: 410 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAE 469

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +  +GL P  VTYN ++HG+C+  ++D A+ LF +M  KGV P  VT+NT++ G 
Sbjct: 470 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 529

Query: 241 IRNNETSKVVELLHRM 256
            +    S+  EL   M
Sbjct: 530 FQTKRFSEAKELYLNM 545



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 6/239 (2%)

Query: 2   DEASRLLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +EA  LL +M     R   PN   Y+T+IDG C     DRA  +F  M  NG   N  TY
Sbjct: 186 EEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTY 245

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI+GY      +E + +  +M ++G++P   TY +L + L  + ++   L   D M  
Sbjct: 246 NCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFL---DLMVE 302

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + ++ +   +N F     K G I +A ++F  +R       +  Y  LID LCK+G+++ 
Sbjct: 303 NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDD 362

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A   F  +   G+ PN+V +N +++G C   + ++A +L  +M  +G+ PN V FNTL+
Sbjct: 363 AEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLI 421



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 36/276 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M Q G+ PN   Y  LID  C  G +D A   F  M   G   N+V +N+
Sbjct: 325 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 384

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C     E +  L  EML +GI P  V +NTL   L  + +V    +L D M+H  
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 444

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +Y   I G C  G   EA ++F  +  +        Y+ L+ G C   +++ A+
Sbjct: 445 VRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 504

Query: 181 ELFQSLPRVGLMPNVVTYN-----------------------------------IMIHGF 205
            LF+ + R G+ P VVTYN                                   I+++G 
Sbjct: 505 CLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 564

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           C    +D+A  +F  + +KG+  N +TF T+M+G +
Sbjct: 565 CKSNCVDEAFKMFQSLCSKGLQLNIITF-TIMIGAL 599



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 121/283 (42%), Gaps = 36/283 (12%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYNTLINGYCKT 68
           L+++ G R N  V + L+ G C    +  A ++ +  M   GC  + V+Y+ L+ G+C  
Sbjct: 123 LILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNE 182

Query: 69  KDVEESLNLYSEMLS---KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
              EE+L L   M +   +   P VVTY T+  GL +    + A  +F +M  + V    
Sbjct: 183 NRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNN 242

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC-------------- 171
            TYN  I G    G   E  ++   +     +     Y  L++ LC              
Sbjct: 243 DTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVE 302

Query: 172 ------------------KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
                             K G ++ A ++F  + + GL PNVV Y  +I   C  G++D 
Sbjct: 303 NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDD 362

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           A   F  M  +GV PN V FN+L+ G    ++  +  EL++ M
Sbjct: 363 AEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEM 405



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 103/258 (39%), Gaps = 36/258 (13%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PN   YS LI   C  G +  +   F  +   G   N +  N L+ G C  K V E++
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 76  N-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS---DVAAETSTYNTF 131
           + L   M   G  P  V+Y+ L  G    ++ E AL+L   M +           TY T 
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDGLCK      A  +F+ +     +   + Y+CLI G   IGK +   ++ + +   GL
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 192 MPNVVTY--------------------------------NIMIHGFCNDGQMDKAHDLFL 219
            P+  TY                                NI    +   G +DKA D+F 
Sbjct: 274 KPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 333

Query: 220 DMEAKGVAPNCVTFNTLM 237
            M   G++PN V +  L+
Sbjct: 334 KMRQHGLSPNVVNYGALI 351



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 99/217 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+++GV P    Y+T++ G   T     A+EL+++M  +G   ++ TYN 
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK+  V+E+  ++  + SKG++  ++T+  +   L +  + E A+ LF  +  + 
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY    + L + G + E   LF  +         +  + L+  L   G +  A 
Sbjct: 620 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 679

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
                L          T +++I  F +D     A  L
Sbjct: 680 AYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 17/167 (10%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE-----------AAELFRTLRVL 154
           ++ ALKLFDE+      A    +N  ++ + +                    LF  + V 
Sbjct: 30  LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRM-VR 88

Query: 155 KCELGIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +C + +      YS LI  LC++G+L+ ++  F  + + G   N +  N ++ G C+  +
Sbjct: 89  ECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKR 148

Query: 211 MDKAHDLFLD-MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + +A D+ L  M   G  P+ V+++ L+ G    N   + +ELL  M
Sbjct: 149 VGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMM 195


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  197 bits (501), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 102/256 (39%), Positives = 149/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL +M + GV+PN   YSTL+DG+CL GE+  A+++F +M       +V +YN 
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNI 417

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK K V+E++NL  EML K + P  VTYN+L  GL +  ++  AL L  E+ H  
Sbjct: 418 MINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TY + +DGLCKN  + +A  LF  ++    +     Y+ LIDGLCK  +L+ A 
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQ 537

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LFQ +   G   +V TYN+MI G C +G +D+A  +   ME  G  P+ VTF  ++   
Sbjct: 538 KLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSL 597

Query: 241 IRNNETSKVVELLHRM 256
              +E  K  +LLH M
Sbjct: 598 FEKDENDKAEKLLHEM 613



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 140/251 (55%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + N   Y TL++G C  GE   A +L   ++      +VV YNT+I+G CK 
Sbjct: 226 DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKD 285

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V E+ + Y+EM S+GI P V+TY+TL  G     Q+  A  L +EM   ++  +  TY
Sbjct: 286 KLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTY 345

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              ID LCK G + EA  L   +     +  +  YS L+DG C +G++  A ++F ++ +
Sbjct: 346 TILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQ 405

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             + P+V +YNIMI+G C    +D+A +L  +M  K V PN VT+N+L+ G  ++   + 
Sbjct: 406 TEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITS 465

Query: 249 VVELLHRMDER 259
            ++L+  +  R
Sbjct: 466 ALDLMKELHHR 476



 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL ++  R  RP+  +Y+T+IDG C    ++ A + +  M+  G   +V+TY+TLI 
Sbjct: 256 AIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLIC 315

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    +  + +L +EM  K I P V TY  L   L +  +++ A  L   M    V  
Sbjct: 316 GFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKP 375

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY+T +DG C  G +  A ++F  +   +    + +Y+ +I+GLCK   ++ A  L 
Sbjct: 376 NVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLL 435

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    ++PN VTYN +I G C  G++  A DL  ++  +G   + +T+ +L+ G  +N
Sbjct: 436 REMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKN 495

Query: 244 NETSKVVELLHRMDER 259
               K + L  +M ER
Sbjct: 496 QNLDKAIALFMKMKER 511



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 35/226 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M+ + V PN   Y++LIDG C +G I  A +L   +   G   +V+TY +
Sbjct: 428 VDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK +++++++ L+ +M  +GI+P   TY  L  GL +  ++++A KLF  +    
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKG 547

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  I GLCK G + EA                         L    K+E   
Sbjct: 548 CCIDVYTYNVMIGGLCKEGMLDEA-------------------------LAMKSKMEDN- 581

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
                    G +P+ VT+ I+I       + DKA  L  +M AKG+
Sbjct: 582 ---------GCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 1/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D  S+   +++ R   P+   +  ++           A  L   M++ G   ++VT + L
Sbjct: 115 DAVSQFNGMLLMRNT-PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSIL 173

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +C    +  S ++  ++L  G +P  +   TL  GL    +V+ +L   D++     
Sbjct: 174 INCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGF 233

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                +Y T ++GLCK G    A +L R +        +  Y+ +IDGLCK   +  A++
Sbjct: 234 QMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYD 293

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            +  +   G+ P+V+TY+ +I GFC  GQ+  A  L  +M  K + P+  T+  L+    
Sbjct: 294 FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALC 353

Query: 242 RNNETSKVVELLHRMDE 258
           +  +  +   LL  M +
Sbjct: 354 KEGKLKEAKNLLGVMTK 370



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 102/207 (49%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +++ +  ++    K K    +++L  +M  KGI P +VT + L +    + Q+  +  + 
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVL 190

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            ++        T    T + GLC  G + ++      +     ++   +Y  L++GLCKI
Sbjct: 191 GKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKI 250

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G+   A +L + +      P+VV YN +I G C D  +++A+D + +M ++G+ P+ +T+
Sbjct: 251 GETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITY 310

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           +TL+ G     +      LL+ M  +N
Sbjct: 311 STLICGFCLAGQLMGAFSLLNEMTLKN 337


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  197 bits (500), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 101/256 (39%), Positives = 150/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E+  LL +M ++GV+P+  +YS L+DG+CL GE+ +A+++F+ M   G   +V +YN 
Sbjct: 236 VKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNI 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK K V+E++NL  EML K + P  VTY++L  GL ++ ++   L L  EM H  
Sbjct: 296 IINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A   TYN+ +DGLCKN  + +A  LF  ++    +     Y+ LIDGLCK G+L+   
Sbjct: 356 QPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQ 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LFQ L   G   +V TY +MI G C +G  D+A  +   ME  G  PN VTF  ++   
Sbjct: 416 ALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSL 475

Query: 241 IRNNETSKVVELLHRM 256
           +  +E  K  +LLH M
Sbjct: 476 LEKDENDKAEKLLHEM 491



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/248 (37%), Positives = 135/248 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M  RG+ P+   Y+TLI GFCL G++  A  L   M +     N+ TYNT
Sbjct: 166 VDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNT 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V+ES NL + M  KG++P VV Y+ L  G   + +V+ A ++F  M  + 
Sbjct: 226 LIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG 285

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +YN  I+GLCK   + EA  L R +           YS LIDGLCK+G++ T  
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTIL 345

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   G   N+VTYN ++ G C +  +DKA  LF+ M+ +G+ PN  T+  L+ G 
Sbjct: 346 DLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405

Query: 241 IRNNETSK 248
            +     K
Sbjct: 406 CKGGRLKK 413



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 143/251 (56%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + +   Y  L++G C  GE   A +L  +++      +VV Y+T+I+G CK 
Sbjct: 104 DKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKD 163

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V+E+ +LYSEM ++GI P V+TY TL  G     Q+  A  L +EM   ++     TY
Sbjct: 164 KLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTY 223

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT ID LCK G + E+  L   +     +  +  YS L+DG C +G+++ A ++F  + +
Sbjct: 224 NTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQ 283

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P+V +YNI+I+G C   ++D+A +L  +M  K + P+ VT+++L+ G  +    + 
Sbjct: 284 TGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITT 343

Query: 249 VVELLHRMDER 259
           +++L   M  R
Sbjct: 344 ILDLTKEMHHR 354



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 136/256 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  +  R  RP+  +YST+IDG C    +D A +L+  M+  G   +V+TY TLI 
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLIC 193

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    + E+  L +EM+ K I P + TYNTL   L +  +V+ +  L   M    V  
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKP 253

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   Y+  +DG C  G + +A ++F  +        + +Y+ +I+GLCK  +++ A  L 
Sbjct: 254 DVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    ++P+ VTY+ +I G C  G++    DL  +M  +G   N VT+N+L+ G  +N
Sbjct: 314 REMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKN 373

Query: 244 NETSKVVELLHRMDER 259
               K + L  +M ER
Sbjct: 374 QNLDKAIALFMKMKER 389



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 132/254 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  +++ G +PN  + +TL+ G CL GE+ ++      +   G   + V+Y  L+NG C
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K  +   ++ L   +  +  RP VV Y+T+  GL +   V+ A  L+ EM    +  +  
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T I G C  G ++EA  L   + +      I  Y+ LID LCK GK++ +  L   +
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + G+ P+VV Y+I++ G+C  G++ KA  +FL M   GV P+  ++N ++ G  +    
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRV 306

Query: 247 SKVVELLHRMDERN 260
            + + LL  M  +N
Sbjct: 307 DEAMNLLREMLHKN 320



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 111/215 (51%)

Query: 45  SMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
            M+  G + ++VT + LIN +C    +  S ++  ++L  G +P  +  NTL  GL    
Sbjct: 35  QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG 94

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +V+ +L   D++       +  +Y   ++GLCK G    A +L RT+        +  YS
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYS 154

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +IDGLCK   ++ A++L+  +   G+ P+V+TY  +I GFC  GQ+ +A  L  +M  K
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK 214

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + PN  T+NTL+    +  +  +   LL  M ++
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK 249



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           ++ +  ++    K K     ++L  +M +KGI P +VT + L +    + Q+  +  +  
Sbjct: 10  IIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLG 69

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++        T   NT + GLC  G + ++      +     ++   +Y  L++GLCKIG
Sbjct: 70  KILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIG 129

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +   A +L +++      P+VV Y+ +I G C D  +D+A+DL+ +M A+G+ P+ +T+ 
Sbjct: 130 ETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYT 189

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
           TL+ G     +  +   LL+ M  +N
Sbjct: 190 TLICGFCLAGQLMEAFGLLNEMILKN 215


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  197 bits (500), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/258 (39%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL+DLMI+ GVRPN   Y+TL+ G CLTG ID A +L   M  NG   N  TY  L+
Sbjct: 459 EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILL 518

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYCK + V+++ +L+ EML KG+ P V TYNT+ HGLF+  +   A +L+  M +S   
Sbjct: 519 RGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTK 578

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ++GLCKN ++ EA ++FR L     +L    ++ +I  L K G+ E A +L
Sbjct: 579 CDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDL 638

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P+VVTY ++      +G + +   LF  ME  G APN    N L+   + 
Sbjct: 639 FATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLH 698

Query: 243 NNETSKVVELLHRMDERN 260
             + S+    L+++DE+N
Sbjct: 699 RGDISRAGVYLYKLDEKN 716



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARE-LFVSMDINGCMHNVVTYNTLINGYCKT 68
           L+++ G R N  V S L+ G C    +D A + L + M   GC  +VV YNT+ING+ + 
Sbjct: 115 LILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFRE 174

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             VE++ NL+ EM+ +GI P VVTY T+  GL +   V+ A  +F +M    V  +  TY
Sbjct: 175 GQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTY 234

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  I G    G   E  ++   +     E     Y+ L+D LCK G+   A   F S+ R
Sbjct: 235 NCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFR 294

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P+V  Y I++HG+   G + + H     M   GV+PN   FN +     +     +
Sbjct: 295 KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEE 354

Query: 249 VVELLHRMDER 259
            + + ++M ++
Sbjct: 355 AMHIFNKMRQQ 365



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E    LDLM+  GV PN  +++ +   +     I+ A  +F  M   G   +VV++  
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V++++  +++M+++G+ P +  +++L +GL  + + E A +LF E+    
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +NT +  LC  G ++EA  L   +  +     + +Y+ L+ G C  G+++ A 
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL PN  TY I++ G+C   ++D A+ LF +M  KGV P   T+NT++ G 
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGL 556

Query: 241 IRNNETSKVVELLHRM 256
            +    S+  EL   M
Sbjct: 557 FQTGRFSEANELYLNM 572



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDL-MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA+ +L L M + G  P+   Y+T+I+GF   G++++A  LF+ M   G   NVVTY 
Sbjct: 141 VDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYT 200

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+I+G CK + V+ +  ++ +M+ +G++P   TYN L HG     + +  +++ +EM   
Sbjct: 201 TVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTH 260

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TY   +D LCKNG   EA   F ++     +  +  Y+ L+ G    G L   
Sbjct: 261 GLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEM 320

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                 +   G+ PN   +NIM   +     +++A  +F  M  +G++P+ V+F  L+
Sbjct: 321 HSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALI 378



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   MI RGV+P+   Y+ LI G+  TG+     ++   M  +G   + +TY  
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK     E+   +  M  KGI+P V  Y  L HG      +       D M  + 
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+     +N       K   I EA  +F  +R       + ++  LID LCK+G+++ A 
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +   G+ PN+  ++ +++G C  G+ +KA +LF ++  +G+  + V FNTLM   
Sbjct: 392 LQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNL 451

Query: 241 I---RNNETSKVVELLHRMDER 259
               R  E  ++++L+ R+  R
Sbjct: 452 CNEGRVMEAQRLIDLMIRVGVR 473



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 7/196 (3%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI---HQVEHALKLFDEMQH---SDVAAE 124
           ++E+L L+ E+L      +V  +N L   +         E  + LF  M     S VA  
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE-LF 183
             TY+  I   C+ G +      F  +      + +   S L+ GLC   +++ A + L 
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G  P+VV YN +I+GF  +GQ++KA++LFL+M  +G+ PN VT+ T++ G  + 
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209

Query: 244 NETSKVVELLHRMDER 259
               +   +  +M +R
Sbjct: 210 QVVDRAKGVFQQMIDR 225



 Score = 41.2 bits (95), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 60/154 (38%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++   +  +  + ++  ++ +I      G  + A +LF ++   G + +VVTY  
Sbjct: 597 VDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRL 656

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +     +   + E   L+S M   G  P     N L   L     +  A     ++   +
Sbjct: 657 IAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKN 716

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + E ST +  I    +  Y   A  L    R L
Sbjct: 717 FSLEASTTSMLISLYSRGEYQPHAKSLPEKYRFL 750


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  196 bits (498), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 156/256 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  ++  MI++GV PN   Y+ ++DG+CL G++ RAR +F SM   G   ++++Y  
Sbjct: 299 VEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTA 358

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGY + K +++++ L+ E+   G++P++VT + L  GLFE+ + E A   FDEMQ + 
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAG 418

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+ T + G  KNG + EA   F  L   + +  I+ Y+ +I+GLCK GKL+ A 
Sbjct: 419 HIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAH 478

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ LP +GL P+V+TY  MI G+C +G +D+A D+   ME  G  P+  T+N ++ G 
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGF 538

Query: 241 IRNNETSKVVELLHRM 256
            R+++ S++   L  +
Sbjct: 539 FRSSKVSEMKAFLKEI 554



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 133/257 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL LM Q   +P+  +Y+ +ID FC  G +D A  L   M       +++TY +LI
Sbjct: 196 KAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLI 255

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K    E+   L+ EM+   I P V T+N++  GL +  +VE A ++   M    V 
Sbjct: 256 DGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVE 315

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  +DG C  G +  A  +F ++     E  I +Y+ LI+G  +  K++ A +L
Sbjct: 316 PNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQL 375

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ + + GL P++VT ++++ G    G+ + A   F +M+A G  PN  T  TL+ G  +
Sbjct: 376 FREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFK 435

Query: 243 NNETSKVVELLHRMDER 259
           N    + +   H+++ R
Sbjct: 436 NGLVEEAMSHFHKLERR 452



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 138/293 (47%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LL+ M Q+ + P+   Y++LIDG     + ++ R LF+ M       +V T+N+
Sbjct: 229 LDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNS 288

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   VE++  + + M+ KG+ P  +TYN +  G     Q+  A ++FD M    
Sbjct: 289 VIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG 348

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y   I+G  +   + +A +LFR +     +  I   S L+ GL ++G+ E A 
Sbjct: 349 IEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAK 408

Query: 181 ELFQSLPRVGLMPNVVT-----------------------------------YNIMIHGF 205
             F  +   G +PN+ T                                   Y  +I+G 
Sbjct: 409 IFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGL 468

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C +G++DKAH  F  +   G+ P+ +T+  ++ G  +     +  ++L +M++
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMED 521



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 128/258 (49%), Gaps = 1/258 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNT 60
           D    +L +  ++G+  N   ++TLI G     ++  A  LF  +   N C  + V Y T
Sbjct: 124 DLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGT 183

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK    +++ +L   M     +P    YN +     +   ++ A  L +EM+  +
Sbjct: 184 VMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKN 243

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + IDGL K     +   LF  +  L     +  ++ +IDGLCK GK+E A 
Sbjct: 244 IPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAE 303

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   +   G+ PN +TYN+++ G+C  GQM +A  +F  M  KG+ P+ +++  L+ G 
Sbjct: 304 EIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGY 363

Query: 241 IRNNETSKVVELLHRMDE 258
           +   +  K ++L   + +
Sbjct: 364 VEKKKMDKAMQLFREISQ 381



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 2/226 (0%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +AF  ST+++  CL    D    +       G  +N VT+ TLI G      V+++++L+
Sbjct: 106 DAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLF 165

Query: 79  SEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            +++ + I  P  V Y T+  GL +    + A  L   M+      +T  YN  ID  CK
Sbjct: 166 KKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCK 225

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           +G +  A  L   ++       I  Y+ LIDGL K+ + E    LF  +  + + P+V T
Sbjct: 226 DGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCT 285

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           +N +I G C +G+++ A ++   M  KGV PN +T+N +M G C+R
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLR 331



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 1/222 (0%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A  LF  M     + + V+++ L+      K     ++++ E+    I       +T
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVL 154
           + +    +H+ +    +        +     T+ T I GL     + +A  LF+ L R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            CE     Y  ++DGLCK G  + A++L + + +    P+   YNI+I  FC DG +D A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             L  +M+ K + P+ +T+ +L+ G  + ++  KV  L   M
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEM 274



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA      + +R    N  +Y+ +I+G C  G++D+A   F  + + G   +V+TY  
Sbjct: 439 VEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTA 498

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYC+   ++E+ ++  +M   G  P   TYN +  G F   +V        E+    
Sbjct: 499 MISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKS 558

Query: 121 VAAETSTYNTFID 133
            + E +T    +D
Sbjct: 559 FSFEAATVELLMD 571


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  196 bits (498), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 153/257 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  M + GV PN   YS+L++G+ L  E+  AR+LF  M   GC  +V +YN LI
Sbjct: 350 EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILI 409

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK K + E+  L++EM+ +G+ P +V+YNTL  GL ++ ++  A  LF  M  +   
Sbjct: 410 NGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNL 469

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DG CK GY+ +A  LFR ++    +  +  Y+ LID +CK   L+ A +L
Sbjct: 470 PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKL 529

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  L   GL PNV  Y  +I+G C +G +D+A + F +ME  G  PN  ++N ++ G ++
Sbjct: 530 FSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQ 589

Query: 243 NNETSKVVELLHRMDER 259
           + + S+ V+L+  M E+
Sbjct: 590 HKDESRAVQLIGEMREK 606



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 136/237 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M+ RG +P+   Y+T+I+G C  GE   A  LF  M   GC  +VVTY+T+I
Sbjct: 210 QAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTII 269

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+L+++S M +KGI P + TYN+L  GL    +   A  + +EM   ++ 
Sbjct: 270 DSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIM 329

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  I+  CK G + EA  + +T+  +  E  +  YS L++G     ++  A +L
Sbjct: 330 PNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKL 389

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F  +   G  P+V +YNI+I+G+C   ++ +A  LF +M  +G+ P+ V++NTL+ G
Sbjct: 390 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDG 446



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 127/230 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D+MI +G +P+ F Y+ LI+G+C    I  A++LF  M   G   ++V+YNTLI
Sbjct: 385 EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 444

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+ +L+  ML+ G  P + TY+ L  G  +   +  A +LF  MQ + + 
Sbjct: 445 DGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLK 504

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  ID +CK+  + EA +LF  L V   +  ++ Y+ +I+GLCK G L+ A E 
Sbjct: 505 PNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEA 564

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           F+++   G  PN  +YN++I GF       +A  L  +M  KG   +  T
Sbjct: 565 FRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 129/255 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ L   M + G +P+   YST+ID  C    ++ A ++F  M   G   N+ TYN+LI 
Sbjct: 246 AAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ 305

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C      E+  + +EM+S  I P +VT++ L +   +   V  A  +   M    V  
Sbjct: 306 GLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEP 365

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY++ ++G      +VEA +LF  +    C+  + +Y+ LI+G CK  ++  A +LF
Sbjct: 366 NVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLF 425

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL P++V+YN +I G C  G++ +AHDLF +M   G  P+  T++ L+ G  + 
Sbjct: 426 NEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQ 485

Query: 244 NETSKVVELLHRMDE 258
              +K   L   M  
Sbjct: 486 GYLAKAFRLFRAMQS 500



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 122/225 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P+ +    LI+ F     +D    +   +   G    +VT+NTLING CK     ++
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQA 211

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L+ +M+++G +P V TY T+ +GL +I +   A  LF +M  +    +  TY+T ID 
Sbjct: 212 VELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDS 271

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + EA ++F  ++       I  Y+ LI GLC   +   A  +   +  + +MPN
Sbjct: 272 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +VT++++I+ FC +G + +A  +   M   GV PN VT+++LM G
Sbjct: 332 IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 376



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    +L  +I+ G++     ++TLI+G C  G+  +A ELF  M   G   +V TY T
Sbjct: 173 VDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTT 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +   +  L+ +M   G +P VVTY+T+   L +  +V  AL +F  M+   
Sbjct: 233 IINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 292

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TYN+ I GLC      EA+ +   +  L     I  +S LI+  CK G +  A 
Sbjct: 293 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 352

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + +++  +G+ PNVVTY+ +++G+    ++ +A  LF  M  KG  P+  ++N L+ G 
Sbjct: 353 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGY 412

Query: 241 IRNNETSKVVELLHRM 256
            +     +  +L + M
Sbjct: 413 CKAKRIGEAKQLFNEM 428



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 127/238 (53%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI-DRARELFVSMDINGCMHNVVTYN 59
           +D+A    + M+ R  RP    ++ L+          D    L   M++ G   +  T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LIN + + + V+   ++ ++++  G++ T+VT+NTL +GL ++ +   A++LFD+M   
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TY T I+GLCK G  V AA LFR +    C+  +  YS +ID LCK  ++  A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            ++F  +   G+ PN+ TYN +I G CN  +  +A  +  +M +  + PN VTF+ L+
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 111/203 (54%), Gaps = 1/203 (0%)

Query: 55  VVTYNTLINGYCKTKDVEES-LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           ++ +N L++   K +   ++ ++L  +M   G+ P   T + L +  F++ +V+    + 
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVL 180

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            ++    +     T+NT I+GLCK G   +A ELF  +     +  +  Y+ +I+GLCKI
Sbjct: 181 AKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKI 240

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G+   A  LF+ +   G  P+VVTY+ +I   C D ++++A D+F  M+AKG++PN  T+
Sbjct: 241 GETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTY 300

Query: 234 NTLMLGCIRNNETSKVVELLHRM 256
           N+L+ G    +   +   +L+ M
Sbjct: 301 NSLIQGLCNFSRWREASAMLNEM 323



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +L   +  +G++PN  +Y+T+I+G C  G +D A E F +M+ +GC  N  +YN 
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
           +I G+ + KD   ++ L  EM  KG    V T
Sbjct: 583 IIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 152/259 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M+++G++P+   Y +L+DG+CL  ++++A+ +F +M   G   NV +YN 
Sbjct: 282 VKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNI 341

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK K V+E++NL+ EM  K I P VVTYN+L  GL +  ++ +ALKL DEM    
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYN+ +D LCKN  + +A  L   ++    +  +  Y+ LIDGLCK G+L+ A 
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ L   G    V TY +MI GFC++   DKA  L   ME  G  PN  T+  ++L  
Sbjct: 462 NIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSL 521

Query: 241 IRNNETSKVVELLHRMDER 259
              +E     +LL  M  R
Sbjct: 522 FEKDENDMAEKLLREMIAR 540



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 146/257 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    D ++  G   N   Y TLI+G C  G+   A +L   +D      NVV YNT+I
Sbjct: 144 QALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTII 203

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K V E+ +LYSEM+SKGI P VVTY+ L  G   + ++  A+ LF++M   ++ 
Sbjct: 204 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEIN 263

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T++  +DG CK G + EA  +   +     +  +  Y  L+DG C + ++  A  +
Sbjct: 264 PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSI 323

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++ + G+  NV +YNIMI+GFC   ++D+A +LF +M  K + P+ VT+N+L+ G  +
Sbjct: 324 FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCK 383

Query: 243 NNETSKVVELLHRMDER 259
           + + S  ++L+  M +R
Sbjct: 384 SGKISYALKLVDEMHDR 400



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 132/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   M+ +G+ P+   YS LI GFC+ G+++ A  LF  M       +V T++ 
Sbjct: 212 VNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI 271

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   V+E+ N+ + M+ +GI+P VVTY +L  G   + QV  A  +F+ M    
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   +YN  I+G CK   + EA  LF+ +        +  Y+ LIDGLCK GK+  A 
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G+  + +TYN ++   C + Q+DKA  L   M+ +G+ P+  T+  L+ G
Sbjct: 392 KLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 143/256 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  +  + V+PN  +Y+T+ID  C    ++ A +L+  M   G   +VVTY+ LI+
Sbjct: 180 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALIS 239

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    + +++ L+++M+S+ I P V T++ L  G  +  +V+ A  +   M    +  
Sbjct: 240 GFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKP 299

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY + +DG C    + +A  +F T+        +++Y+ +I+G CKI K++ A  LF
Sbjct: 300 DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLF 359

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    ++P+VVTYN +I G C  G++  A  L  +M  +GV  + +T+N+++    +N
Sbjct: 360 KEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN 419

Query: 244 NETSKVVELLHRMDER 259
           ++  K + LL +M + 
Sbjct: 420 HQVDKAIALLTKMKDE 435



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 117/226 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + M Q GV  N   Y+ +I+GFC   ++D A  LF  M     + +VVTYN+
Sbjct: 317 VNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNS 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+  +  +L L  EM  +G+    +TYN++   L + HQV+ A+ L  +M+   
Sbjct: 377 LIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   IDGLCK G + +A  +F  L V    + +  Y+ +I G C     + A 
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKAL 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   +   G +PN  TY I+I       + D A  L  +M A+G+
Sbjct: 497 ALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 122/244 (50%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  +   ++ LI+ F   G    +  +F ++   G   N +T  TLI G C    + ++
Sbjct: 86  GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+ + ++++ G     V Y TL +GL ++ Q   AL+L   +    V      YNT ID 
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 205

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           +CK   + EA +L+  +        +  YS LI G C +GKL  A  LF  +    + P+
Sbjct: 206 MCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPD 265

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T++I++ GFC +G++ +A ++   M  +G+ P+ VT+ +LM G     + +K   + +
Sbjct: 266 VYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFN 325

Query: 255 RMDE 258
            M +
Sbjct: 326 TMAQ 329



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 115/239 (48%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P  F +  ++           A  L   M+ NG   ++VT+N LIN + +      S ++
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           ++ +L KG  P  +T  TL  GL    Q+  AL   D++           Y T I+GLCK
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G    A +L R +     +  +  Y+ +ID +CK+  +  A++L+  +   G+ P+VVT
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           Y+ +I GFC  G+++ A  LF  M ++ + P+  TF+ L+ G  +     +   +L  M
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 76/163 (46%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L+D M  RGV  +   Y++++D  C   ++D+A  L   M   G   ++ TY  LI+
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILID 449

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++ N++ ++L KG   TV TY  +  G  +    + AL L  +M+ +    
Sbjct: 450 GLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIP 509

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
              TY   I  L +      A +L R +       G +   CL
Sbjct: 510 NAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFGWKKAYCL 552



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 69  KDVEESL-NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           +D E SL + ++ +L+    P +  +  +   L +I+  + A+ L  EM+ + +A++  T
Sbjct: 34  QDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVT 93

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +N  I+   + G+   +  +F  +     E      + LI GLC  G++  A      + 
Sbjct: 94  FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +G   N V Y  +I+G C  GQ   A  L   ++ K V PN V +NT++
Sbjct: 154 ALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTII 203



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 2/174 (1%)

Query: 88  PTVVTYNTLFHGLFEIHQV-EHAL-KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           P  +   +L+  L   HQ  EH+L   F+ + + +       +   +  L K      A 
Sbjct: 17  PKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAI 76

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L R +        +  ++ LI+   ++G    ++ +F ++ + G  PN +T   +I G 
Sbjct: 77  SLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGL 136

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  GQ+ +A      + A G   N V + TL+ G  +  +TS  ++LL R+D +
Sbjct: 137 CLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGK 190


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 149/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ L   MI +G+ PN   Y++L+DG+C+   +  A  +   M  N C  ++VT+ +
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK K V+E + L+ ++  +G+    VTY+ L  G  +  ++E A +LF EM    
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   +DGLC NG + +A E+F  L+  K  L I  Y+ +I+G+CK GK+E AW
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAW 470

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF SLP  G+ PNV+TY +MI G C  G + +A+ L   ME  G  PN  T+NTL+   
Sbjct: 471 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAH 530

Query: 241 IRNNETSKVVELLHRM 256
           +R+ + +   +L+  M
Sbjct: 531 LRDGDLTASAKLIEEM 546



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 140/252 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M +R V+ + F YST+ID  C  G ID A  LF  M+  G   ++VTYN+L+ G C
Sbjct: 192 LLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC 251

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K     + + L  +M S+ I P V+T+N L     +  +++ A +L+ EM    ++  T 
Sbjct: 252 KAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTI 311

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN+ +DG C    + EA  +   +    C   I  ++ LI G CK+ +++   +LF+ +
Sbjct: 312 TYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKI 371

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL+ N VTY+I++ GFC  G+++ A +LF +M + GV P+ +T+  L+ G   N + 
Sbjct: 372 SKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKL 431

Query: 247 SKVVELLHRMDE 258
            K +E+   + +
Sbjct: 432 EKALEIFEDLQK 443



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 141/256 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  +++ G  P+   ++TLI+G CL  ++  A  L   M  NGC  NVVTYN+++N
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK+ D   +L+L  +M  + ++  V TY+T+   L     ++ A+ LF EM+   + +
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ + GLCK G   +  +L + +   K    +  ++ LID   K GKL+ A EL+
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ PN +TYN ++ G+C   ++ +A+++   M     +P+ VTF +L+ G  + 
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358

Query: 244 NETSKVVELLHRMDER 259
               + ++L  ++ +R
Sbjct: 359 KRVDEGMKLFRKISKR 374



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 149/292 (51%), Gaps = 38/292 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNV------ 55
           D+A  L   MI+    P+   +S    G   T + +   +    M++NG  HN+      
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 56  -----------------------------VTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                                         T+NTLING C    V E++ L + M+  G 
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           +P VVTYN++ +G+ +      AL L  +M   +V A+  TY+T ID LC++G I  A  
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LF+ +     +  +  Y+ L+ GLCK GK     +L + +    ++PNV+T+N++I  F 
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVELLHR 255
            +G++ +A++L+ +M  KG++PN +T+N+LM G C++N  +E + +++L+ R
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVR 338



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 130/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ +LDLM++    P+   +++LI G+C    +D   +LF  +   G + N VTY+ 
Sbjct: 326 LSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSI 385

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++  +E +  L+ EM+S G+ P V+TY  L  GL +  ++E AL++F+++Q S 
Sbjct: 386 LVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 445

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   I+G+CK G + +A  LF +L     +  +  Y+ +I GLCK G L  A 
Sbjct: 446 MNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 505

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L + +   G  PN  TYN +I     DG +  +  L  +M++ G + +  +   ++
Sbjct: 506 ILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 35/223 (15%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA--------- 122
           +++++L+ EM+     P++V ++  F G+    Q    L    +M+ + +A         
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 123 --------------------------AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
                                      +T+T+NT I+GLC    + EA  L   +    C
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           +  +  Y+ +++G+CK G    A +L + +    +  +V TY+ +I   C DG +D A  
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           LF +ME KG+  + VT+N+L+ G  +  + +  V+LL  M  R
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 58/114 (50%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           +Y+ +I+G C  G+++ A  LF S+   G   NV+TY  +I+G CK   + E+  L  +M
Sbjct: 452 MYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 511

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
              G  P   TYNTL         +  + KL +EM+    +A+ S+    ID L
Sbjct: 512 EEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 152/256 (59%), Gaps = 1/256 (0%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLIN 63
           + LL+ M+   + P+   ++T++D  C  G++  A ++   M    GCM NV++YNTLIN
Sbjct: 223 ATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLIN 282

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK + +++++ L+ EM  + + P  VTY+TL HGL  + +++ A+ LF EM       
Sbjct: 283 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 342

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   +D LCKN Y+ EA  L + +     +  I+  +  IDG+C+ G+LE A +LF
Sbjct: 343 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 402

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            +L   GL P+V TY+IMI+G C  G +D+A  LF +M+  G   N   +NT+  G +RN
Sbjct: 403 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 462

Query: 244 NETSKVVELLHRMDER 259
           NETS+ ++LL  M  R
Sbjct: 463 NETSRAIQLLQEMVAR 478



 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 145/259 (55%), Gaps = 1/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D MI  G RP+   Y TLI+G C  G    A  L  SM    C  NV  YNT+I
Sbjct: 116 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTII 175

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ NL+SEM++KGI P + TYN+L H L  + + +H   L +EM  S + 
Sbjct: 176 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 235

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            +  ++NT +D LCK G + EA ++  + ++   C   + +Y+ LI+G CKI +++ A  
Sbjct: 236 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMY 295

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  + R  L+P+ VTY+ +IHG C+  ++  A  LF +M A    PN VT+  L+    
Sbjct: 296 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 355

Query: 242 RNNETSKVVELLHRMDERN 260
           +N   ++ + LL  ++  N
Sbjct: 356 KNRYLAEAMALLKAIEGSN 374



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A    + M++    P+   ++ L+              L   MD  G   N+ T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 61  LINGYCKTK--DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           LIN +C      + E+L+L+ +M+ +G RP VVTY TL +GL ++     A++L   M  
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
            +       YNT ID LCK+  + EA  LF  +        I  Y+ LI  LC + + + 
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLM 237
              L   +    +MP+VV++N ++   C +G++ +AHD+   M +  G  PN +++NTL+
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281

Query: 238 LGCIRNNETSKVVELLHRM 256
            G  +     K + L   M
Sbjct: 282 NGYCKIQRIDKAMYLFGEM 300



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 2/208 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH--QVEHALK 111
           + V +N L+    K K     L+L  +M S GI P + T + L +    ++  ++  AL 
Sbjct: 60  STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALH 119

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           LFD+M       +  TY T I+GLCK G    A  L  ++    C+  + AY+ +ID LC
Sbjct: 120 LFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLC 179

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K  ++  A+ LF  +   G+ P++ TYN +IH  CN  +      L  +M    + P+ V
Sbjct: 180 KDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVV 239

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
           +FNT++    +  + ++  +++ +M +R
Sbjct: 240 SFNTVVDALCKEGKVTEAHDVVDKMIQR 267



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 36/243 (14%)

Query: 3   EASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA  ++D MIQRG   PN   Y+TLI+G+C    ID+A  LF  M     + + VTY+TL
Sbjct: 256 EAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 315

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTY---------------------------- 93
           I+G C  + +++++ L+ EM++    P +VTY                            
Sbjct: 316 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 375

Query: 94  -------NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
                  N    G+    ++E A  LF  +    +  +  TY+  I+GLC+ G + EA++
Sbjct: 376 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 435

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LFR +    C L    Y+ +  G  +  +   A +L Q +   G   +  T  + +    
Sbjct: 436 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 495

Query: 207 NDG 209
           +DG
Sbjct: 496 DDG 498



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  +    + P+  V +  IDG C  GE++ AR+LF ++   G   +V TY+ 
Sbjct: 360 LAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSI 419

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+   ++E+  L+ EM   G       YNT+  G    ++   A++L  EM    
Sbjct: 420 MINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 479

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFR 149
            +A+ ST   F+  L  +G      ++ R
Sbjct: 480 FSADASTMTLFVKMLSDDGLDQSLKQILR 508


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 100/258 (38%), Positives = 155/258 (60%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL+DLM++ GVRP+   Y+TL+DG CLTG ID A +L   +   G   + VTYNTL+
Sbjct: 465 EAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLL 524

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK + ++++ +L+ EML KG+ P VVTYNT+ HGLF+  +   A +L+  M +S   
Sbjct: 525 HGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 584

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I+GLCKN ++ EA ++F +L     +L I   + +I  L K G+ E A +L
Sbjct: 585 MNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDL 644

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P+V TY ++      +G +++  +LF  ME  G APN    N L+   + 
Sbjct: 645 FATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLH 704

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L ++DE+N
Sbjct: 705 RGDINRAGAYLSKLDEKN 722



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 141/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E    LDLM+  GV P+  +++ +   +     ID A  +F  M       N+VTY  
Sbjct: 323 LSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGA 382

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V++++  +++M+ +G+ P +  +++L +GL  + + E A +LF E+    
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQG 442

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T  +NT +  LC+ G ++EA  L   +  +     + +Y+ L+DG C  G+++ A 
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +  +GL P+ VTYN ++HG+C   ++D A+ LF +M  KG+ P+ VT+NT++ G 
Sbjct: 503 KLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGL 562

Query: 241 IRNNETSKVVELLHRM 256
            +    S+  EL   M
Sbjct: 563 FQTGRFSEAKELYLSM 578



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + D M Q+ + PN   Y  LID  C  G +D A   F  M   G   ++  +++
Sbjct: 358 IDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSS 417

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C     E++  L+ E+L +GIR   V +NTL   L    +V  A +L D M    
Sbjct: 418 LVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVG 477

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +YNT +DG C  G I EAA+L   +  +  +     Y+ L+ G CK  +++ A+
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAY 537

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   GL P+VVTYN ++HG    G+  +A +L+L M       N  T+N ++ G 
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597

Query: 241 IRNNETSKVVELLHRM 256
            +NN   +  ++ H +
Sbjct: 598 CKNNFVDEAFKMFHSL 613



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  G+ P+ FV+S+L+ G C   + ++A ELF  +   G   + V +NT
Sbjct: 393 VDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNT 452

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTV------------------------------ 90
           L+   C+   V E+  L   ML  G+RP V                              
Sbjct: 453 LMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIG 512

Query: 91  -----VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                VTYNTL HG  +  +++ A  LF EM    +  +  TYNT + GL + G   EA 
Sbjct: 513 LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 572

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EL+ ++   + ++ I  Y+ +I+GLCK   ++ A+++F SL    L  ++ T NIMI   
Sbjct: 573 ELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGAL 632

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
              G+ + A DLF  + A G+ P+  T+  +    I+     ++ EL   M+E
Sbjct: 633 LKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEE 685



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   MI +GVRPN   Y+ LI G+   G+     ++   M  +G   +   Y  
Sbjct: 218 VDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAV 277

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK     E+ N++  ++ KGI+P V  Y  L HG      +       D M  + 
Sbjct: 278 LLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNG 337

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+ +   +N       K   I EA  +F  +R  +    I  Y  LID LCK+G+++ A 
Sbjct: 338 VSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAV 397

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +   G+ P++  ++ +++G C   + +KA +LF ++  +G+  + V FNTLM   
Sbjct: 398 LKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNL 457

Query: 241 IRNN---ETSKVVELLHRMDER 259
            R     E  ++++L+ R+  R
Sbjct: 458 CREGRVMEAQRLIDLMLRVGVR 479



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 5/255 (1%)

Query: 10  LMIQRGVRPN-AFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYNTLINGYCK 67
           L+++ G R N   ++S L+ G C    +D A ++ +  M   GC  +V +Y+ L+ G+C 
Sbjct: 117 LILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCN 176

Query: 68  TKDVEESLNLYSEMLSKGI---RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
            K  EE+L L S M   G     P VVTY T+  GL +   V+ A  +F  M    V   
Sbjct: 177 EKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPN 236

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             TY   I G    G   E  ++ + +     +     Y+ L+D LCK G+   A  +F 
Sbjct: 237 NHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFD 296

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           S+ R G+ PNV  Y I++HG+  +G + + H     M   GV+P+   FN +     +  
Sbjct: 297 SVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKA 356

Query: 245 ETSKVVELLHRMDER 259
              + + +  +M ++
Sbjct: 357 MIDEAMHIFDKMRQQ 371



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 122/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA++LLD+++  G++P+   Y+TL+ G+C    ID A  LF  M + G   +VVTYNT
Sbjct: 498 IDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNT 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G  +T    E+  LY  M++   +  + TYN + +GL + + V+ A K+F  +   D
Sbjct: 558 ILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKD 617

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T N  I  L K G   +A +LF T+        +E Y  + + L K G LE   
Sbjct: 618 LQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELD 677

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ELF ++   G  PN    N ++    + G +++A      ++ K  +    T + L+
Sbjct: 678 ELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 4/241 (1%)

Query: 1   MDEASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING---CMHNVV 56
           +DEA+  LL  M + G  P+ F YS L+ GFC     + A EL   M  +G      NVV
Sbjct: 144 VDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVV 203

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           TY T+I+G CK + V+ +  ++  M+ KG+RP   TY  L HG   I + +  +++  EM
Sbjct: 204 TYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEM 263

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               +  +   Y   +D LCKNG   EA  +F ++     +  +  Y  L+ G    G L
Sbjct: 264 STHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSL 323

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
                    +   G+ P+   +NIM   +     +D+A  +F  M  + ++PN VT+  L
Sbjct: 324 SEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGAL 383

Query: 237 M 237
           +
Sbjct: 384 I 384



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 10/157 (6%)

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEA--- 162
           ALKLFDEM      A    +N  +  + +      A+EL  +L    + +C + +     
Sbjct: 35  ALKLFDEMLTHARPASVRAFNQLLTAVSR-ARCSSASELVVSLFNRMIRECSIKVAPSSF 93

Query: 163 -YSCLIDGLCKIGKLETAWELFQSLPRVGLMPN-VVTYNIMIHGFCNDGQMDKAHDLFL- 219
            Y+ LI   C++G+L+  +  F  + + G   N  V ++ ++ G C+  ++D+A D+ L 
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLR 153

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            M   G  P+  +++ L+ G        + +ELL  M
Sbjct: 154 RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMM 190



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 56/140 (40%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++   +  + ++ + F  + +I      G  + A +LF ++   G + +V TY  
Sbjct: 603 VDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCL 662

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +     K   +EE   L+S M   G  P     N L   L     +  A     ++   +
Sbjct: 663 IAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKN 722

Query: 121 VAAETSTYNTFIDGLCKNGY 140
            + E ST +  I    +  Y
Sbjct: 723 FSLEASTTSMLISIYSRGEY 742


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 145/254 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + MI RG+ P+   Y++LIDGFC    +  A ++F  M   GC  ++VTY+ LI
Sbjct: 362 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 421

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N YCK K V++ + L+ E+ SKG+ P  +TYNTL  G  +  ++  A +LF EM    V 
Sbjct: 422 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 481

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   +DGLC NG + +A E+F  ++  +  LGI  Y+ +I G+C   K++ AW L
Sbjct: 482 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 541

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ P+VVTYN+MI G C  G + +A  LF  M+  G  P+  T+N L+   + 
Sbjct: 542 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 601

Query: 243 NNETSKVVELLHRM 256
            +     VEL+  M
Sbjct: 602 GSGLISSVELIEEM 615



 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 140/248 (56%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +R ++ +   YS +ID  C  G  D A  LF  M++ G   +VVTY++LI G C    
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            ++   +  EM+ + I P VVT++ L     +  ++  A +L++EM    +A +T TYN+
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK   + EA ++F  +    CE  I  YS LI+  CK  +++    LF+ +   G
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L+PN +TYN ++ GFC  G+++ A +LF +M ++GV P+ VT+  L+ G   N E +K +
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504

Query: 251 ELLHRMDE 258
           E+  +M +
Sbjct: 505 EIFEKMQK 512



 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 143/257 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+ +++L  MI R + P+   +S LID F   G++  A+EL+  M   G   + +TYN+L
Sbjct: 326 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   + E+  ++  M+SKG  P +VTY+ L +   +  +V+  ++LF E+    +
Sbjct: 386 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 445

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T TYNT + G C++G +  A ELF+ +        +  Y  L+DGLC  G+L  A E
Sbjct: 446 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 505

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + +  +   +  YNI+IHG CN  ++D A  LF  +  KGV P+ VT+N ++ G  
Sbjct: 506 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 565

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   L  +M E
Sbjct: 566 KKGSLSEADMLFRKMKE 582



 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M++ G +P+   Y  +++  C +G    A +LF  M+      +VV Y+ 
Sbjct: 220 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK    +++L+L++EM  KGI+  VVTY++L  GL    + +   K+  EM   +
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T++  ID   K G ++EA EL+  +           Y+ LIDG CK   L  A 
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 399

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   G  P++VTY+I+I+ +C   ++D    LF ++ +KG+ PN +T+NTL+LG 
Sbjct: 400 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 459

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ + +   EL   M  R
Sbjct: 460 CQSGKLNAAKELFQEMVSR 478



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 126/235 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+++ DLM+ +G  P+   YS LI+ +C    +D    LF  +   G + N +TYNTL+
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 456

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C++  +  +  L+ EM+S+G+ P+VVTY  L  GL +  ++  AL++F++MQ S + 
Sbjct: 457 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 516

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  I G+C    + +A  LF +L     +  +  Y+ +I GLCK G L  A  L
Sbjct: 517 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 576

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           F+ +   G  P+  TYNI+I        +  + +L  +M+  G + +  T   ++
Sbjct: 577 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 631



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 126/230 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+   +STL++GFCL G +  A  L   M       ++VT +TLING C    V E+
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L   M+  G +P  VTY  + + L +      AL LF +M+  ++ A    Y+  ID 
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+G   +A  LF  + +   +  +  YS LI GLC  GK +   ++ + +    ++P+
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           VVT++ +I  F  +G++ +A +L+ +M  +G+AP+ +T+N+L+ G  + N
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 12/251 (4%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM------HNVVTYNTLINGYCKT 68
           G+  + +  + +I+ +C      R ++L  +  + G         + +T++TL+NG+C  
Sbjct: 129 GIEHDMYTMTIMINCYC------RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 182

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             V E++ L   M+    RP +VT +TL +GL    +V  AL L D M       +  TY
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              ++ LCK+G    A +LFR +     +  +  YS +ID LCK G  + A  LF  +  
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 302

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+  +VVTY+ +I G CNDG+ D    +  +M  + + P+ VTF+ L+   ++  +  +
Sbjct: 303 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 362

Query: 249 VVELLHRMDER 259
             EL + M  R
Sbjct: 363 AKELYNEMITR 373



 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 122/260 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + MIQ    P    ++ L      T + D        M++NG  H++ T   
Sbjct: 80  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN YC+ K +  + ++       G  P  +T++TL +G     +V  A+ L D M    
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T +T I+GLC  G + EA  L   +     +     Y  +++ LCK G    A 
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +    +  +VV Y+I+I   C DG  D A  LF +ME KG+  + VT+++L+ G 
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319

Query: 241 IRNNETSKVVELLHRMDERN 260
             + +     ++L  M  RN
Sbjct: 320 CNDGKWDDGAKMLREMIGRN 339



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 78/153 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M+ RGV P+   Y  L+DG C  GE+++A E+F  M  +     +  YN 
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C    V+++ +L+  +  KG++P VVTYN +  GL +   +  A  LF +M+   
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
              +  TYN  I        ++ + EL   ++V
Sbjct: 585 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 617


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  194 bits (492), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 151/259 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L  M + GV P+   YS+L+ G+ L  E+  AR+LF +M   GC  +V +YN 
Sbjct: 324 VSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNI 383

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK K ++E+  L++EM+ +G+ P  V+YNTL HGL ++  +  A  LF  M  + 
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNG 443

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  +DG CK GY  +A  LFR ++    +  +  Y+ LID +CK G L  A 
Sbjct: 444 NLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDAR 503

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  L   GL PN   Y  +I+G C +G +D+A + F +ME  G  P+ +++N ++ G 
Sbjct: 504 KLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGF 563

Query: 241 IRNNETSKVVELLHRMDER 259
           + + + S+ V+L+  M ++
Sbjct: 564 LHHKDESRAVQLIGEMRDK 582



 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 141/237 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M+ RG RP+ + Y+T+I+G C  GE   A  L   M+  GC  NVVTY+T+I
Sbjct: 186 QAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTII 245

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + + K + V E+L+++S M  KGI P + TYN+L  GL    Q + A  L +EM+  ++ 
Sbjct: 246 DSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIM 305

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +D +CK G + EA  + +T+  +  E  +  YS L+ G     ++  A +L
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL 365

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F ++   G  P+V +YNI+I+G+C   ++D+A  LF +M  +G+ PN V++NTL+ G
Sbjct: 366 FDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422



 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 138/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EAS LL+ M    + P+   ++ L+D  C  G++  A+ +  +M   G   +VVTY++L+
Sbjct: 291 EASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM 350

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GY    +V E+  L+  M++KG +P V +YN L +G  ++ +++ A +LF+EM H  + 
Sbjct: 351 YGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLT 410

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               +YNT I GLC+ G + EA  LF+ +        +  YS L+DG CK G    A+ L
Sbjct: 411 PNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRL 470

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+++      PN+V YNI+I   C  G +  A  LF ++  KG+ PN   + T++ G  +
Sbjct: 471 FRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCK 530

Query: 243 NNETSKVVELLHRMDE 258
                + +E    M+E
Sbjct: 531 EGLLDEALEAFRNMEE 546



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 123/223 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI +G +P+ F Y+ LI+G+C    ID A++LF  M   G   N V+YNTLI
Sbjct: 361 EARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLI 420

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+ NL+  M + G  P + TY+ L  G  +      A +LF  MQ +   
Sbjct: 421 HGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSK 480

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  ID +CK+G + +A +LF  L V   +   + Y+ +I+GLCK G L+ A E 
Sbjct: 481 PNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEA 540

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           F+++   G  P+ ++YN++I GF +     +A  L  +M  KG
Sbjct: 541 FRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 126/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ PN +  S LI+ F     +D A  +   +   G    +VT+ TLIN  CK     ++
Sbjct: 128 GLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQA 187

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L+ +M+++G RP V TY T+ +GL +I +   A  L  +M+ +       TY+T ID 
Sbjct: 188 MELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDS 247

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
             K+  + EA ++F  ++V      I  Y+ LI GLC   + + A  L   +  + +MP+
Sbjct: 248 HRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD 307

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +VT+N+++   C +G++ +A  +   M   GV P+ VT+++LM G    +E  +  +L  
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFD 367

Query: 255 RM 256
            M
Sbjct: 368 AM 369



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI-DRARELFVSMDINGCMHNVVTYN 59
           +D+A    + M+ R   P    ++ L+      G+  D    L   M++ G   N+ T +
Sbjct: 78  IDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLS 137

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LIN +   + V+ + ++ ++++  G++PT+VT+ TL + L ++ +   A++LFD+M   
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TY T I+GLCK G    AA L + +    C+  +  YS +ID   K  ++  A
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++F  +   G+ P++ TYN +I G CN  Q  +A  L  +M +  + P+ VTFN L+  
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  + S+   +L  M E
Sbjct: 318 ICKEGKVSEAQGVLKTMTE 336


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  194 bits (492), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 100/257 (38%), Positives = 144/257 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M+ RG+ P+   YS+LIDGFC    +  A ++   M   GC  N+VTY+ LI
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N YCK K V+  + L+ E+ SKG+    VTYNTL  G  +  ++  A +LF EM    V 
Sbjct: 392 NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVP 451

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   +DGLC NG + +A E+F  ++  +  LGI  Y+ +I G+C   K++ AW L
Sbjct: 452 PSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSL 511

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ P+V+TYN+MI G C  G + +A  LF  M+  G AP+  T+N L+   + 
Sbjct: 512 FCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLG 571

Query: 243 NNETSKVVELLHRMDER 259
            +     VEL+  M  R
Sbjct: 572 GSGVISSVELIEEMKMR 588



 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 147/257 (57%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+ +++L  MI R + PN   +S LID F   G++  A+EL+  M   G   + +TY++L
Sbjct: 296 DDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSL 355

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   + E+  +   M+SKG  P +VTY+ L +   +  +V++ ++LF E+    +
Sbjct: 356 IDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL 415

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A+T TYNT + G C++G +  A ELF+ +        +  Y  L+DGLC  G+L+ A E
Sbjct: 416 VADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALE 475

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + +  ++  +  YNI+IHG CN  ++D A  LF  +  KGV P+ +T+N ++ G  
Sbjct: 476 IFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLC 535

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   L  +M E
Sbjct: 536 KKGSLSEADMLFRKMKE 552



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 136/248 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +R ++ +   YS +ID  C  G +D A  LF  M++ G   +VV Y+++I G C    
Sbjct: 235 MEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGR 294

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            ++   +  EM+ + I P VVT++ L     +  ++  A +L++EM    +A +T TY++
Sbjct: 295 WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSS 354

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK   + EA ++   +    CE  I  YS LI+  CK  +++    LF  +   G
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L+ + VTYN ++ GFC  G+++ A +LF +M ++GV P+ VT+  L+ G   N E  K +
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL 474

Query: 251 ELLHRMDE 258
           E+  +M +
Sbjct: 475 EIFEKMQK 482



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 132/238 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+++LDLM+ +G  PN   YS LI+ +C    +D    LF  +   G + + VTYNT
Sbjct: 365 LGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNT 424

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++  +  +  L+ EM+S+G+ P+VVTY  L  GL +  +++ AL++F++MQ S 
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      YN  I G+C    + +A  LF +L V   +  +  Y+ +I GLCK G L  A 
Sbjct: 485 MILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEAD 544

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            LF+ +   G  P+  TYNI+I        +  + +L  +M+ +G A +  T   +++
Sbjct: 545 MLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVV 602



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 133/245 (54%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++ G  PN   +STLI+GFCL G +  A  L   M       NVVT NTLING C    V
Sbjct: 131 LKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRV 190

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
            E+L L   M+  G     +TY  + + + +      AL LF +M+   + A    Y+  
Sbjct: 191 TEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIV 250

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           ID LCK+G + +A  LF  + +   +  + AYS +I GLC  G+ +   ++ + +    +
Sbjct: 251 IDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNI 310

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +PNVVT++ +I  F  +G++ +A +L+ +M A+G+AP+ +T+++L+ G  + N   +  +
Sbjct: 311 IPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQ 370

Query: 252 LLHRM 256
           +L  M
Sbjct: 371 MLDLM 375



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 12/251 (4%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM------HNVVTYNTLINGYCKT 68
           G+  N +  + +I+ FC      R R+L  +  + G         N +T++TLING+C  
Sbjct: 99  GIEHNMYTMNIMINCFC------RKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLE 152

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             V E++ L   M+    RP VVT NTL +GL    +V  AL L D M      A   TY
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY 212

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              ++ +CK+G    A +LFR +     +  +  YS +ID LCK G L+ A  LF  +  
Sbjct: 213 GPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEM 272

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+  +VV Y+ +I G CNDG+ D    +  +M  + + PN VTF+ L+   ++  +  +
Sbjct: 273 KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLE 332

Query: 249 VVELLHRMDER 259
             EL + M  R
Sbjct: 333 AKELYNEMVAR 343



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 123/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L + MIQ    P+   +S L        E D        MD+NG  HN+ T N 
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN +C+ + +  + ++    L  G  P  +T++TL +G     +V  A+ L D M    
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T NT I+GLC  G + EA  L   +    CE     Y  +++ +CK G    A 
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +    +  +VV Y+I+I   C DG +D A  LF +ME KG+  + V +++++ G 
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 241 IRNNETSKVVELLHRMDERN 260
             +       ++L  M  RN
Sbjct: 290 CNDGRWDDGAKMLREMIGRN 309


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  194 bits (492), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 145/254 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + MI RG+ P+   Y++LIDGFC    +  A ++F  M   GC  ++VTY+ LI
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N YCK K V++ + L+ E+ SKG+ P  +TYNTL  G  +  ++  A +LF EM    V 
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   +DGLC NG + +A E+F  ++  +  LGI  Y+ +I G+C   K++ AW L
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   G+ P+VVTYN+MI G C  G + +A  LF  M+  G  P+  T+N L+   + 
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572

Query: 243 NNETSKVVELLHRM 256
            +     VEL+  M
Sbjct: 573 GSGLISSVELIEEM 586



 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 140/248 (56%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +R ++ +   YS +ID  C  G  D A  LF  M++ G   +VVTY++LI G C    
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            ++   +  EM+ + I P VVT++ L     +  ++  A +L++EM    +A +T TYN+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK   + EA ++F  +    CE  I  YS LI+  CK  +++    LF+ +   G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L+PN +TYN ++ GFC  G+++ A +LF +M ++GV P+ VT+  L+ G   N E +K +
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475

Query: 251 ELLHRMDE 258
           E+  +M +
Sbjct: 476 EIFEKMQK 483



 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 143/257 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+ +++L  MI R + P+   +S LID F   G++  A+EL+  M   G   + +TYN+L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   + E+  ++  M+SKG  P +VTY+ L +   +  +V+  ++LF E+    +
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T TYNT + G C++G +  A ELF+ +        +  Y  L+DGLC  G+L  A E
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + +  +   +  YNI+IHG CN  ++D A  LF  +  KGV P+ VT+N ++ G  
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536

Query: 242 RNNETSKVVELLHRMDE 258
           +    S+   L  +M E
Sbjct: 537 KKGSLSEADMLFRKMKE 553



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M++ G +P+   Y  +++  C +G    A +LF  M+      +VV Y+ 
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK    +++L+L++EM  KGI+  VVTY++L  GL    + +   K+  EM   +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T++  ID   K G ++EA EL+  +           Y+ LIDG CK   L  A 
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   G  P++VTY+I+I+ +C   ++D    LF ++ +KG+ PN +T+NTL+LG 
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ + +   EL   M  R
Sbjct: 431 CQSGKLNAAKELFQEMVSR 449



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 126/235 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+++ DLM+ +G  P+   YS LI+ +C    +D    LF  +   G + N +TYNTL+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C++  +  +  L+ EM+S+G+ P+VVTY  L  GL +  ++  AL++F++MQ S + 
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  I G+C    + +A  LF +L     +  +  Y+ +I GLCK G L  A  L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           F+ +   G  P+  TYNI+I        +  + +L  +M+  G + +  T   ++
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 126/230 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+   +STL++GFCL G +  A  L   M       ++VT +TLING C    V E+
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L   M+  G +P  VTY  + + L +      AL LF +M+  ++ A    Y+  ID 
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+G   +A  LF  + +   +  +  YS LI GLC  GK +   ++ + +    ++P+
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           VVT++ +I  F  +G++ +A +L+ +M  +G+AP+ +T+N+L+ G  + N
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 12/251 (4%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM------HNVVTYNTLINGYCKT 68
           G+  + +  + +I+ +C      R ++L  +  + G         + +T++TL+NG+C  
Sbjct: 100 GIEHDMYTMTIMINCYC------RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             V E++ L   M+    RP +VT +TL +GL    +V  AL L D M       +  TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              ++ LCK+G    A +LFR +     +  +  YS +ID LCK G  + A  LF  +  
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+  +VVTY+ +I G CNDG+ D    +  +M  + + P+ VTF+ L+   ++  +  +
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333

Query: 249 VVELLHRMDER 259
             EL + M  R
Sbjct: 334 AKELYNEMITR 344



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 122/260 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + MIQ    P    ++ L      T + D        M++NG  H++ T   
Sbjct: 51  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN YC+ K +  + ++       G  P  +T++TL +G     +V  A+ L D M    
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T +T I+GLC  G + EA  L   +     +     Y  +++ LCK G    A 
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +    +  +VV Y+I+I   C DG  D A  LF +ME KG+  + VT+++L+ G 
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 241 IRNNETSKVVELLHRMDERN 260
             + +     ++L  M  RN
Sbjct: 291 CNDGKWDDGAKMLREMIGRN 310



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 78/153 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M+ RGV P+   Y  L+DG C  GE+++A E+F  M  +     +  YN 
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C    V+++ +L+  +  KG++P VVTYN +  GL +   +  A  LF +M+   
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
              +  TYN  I        ++ + EL   ++V
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  193 bits (491), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 148/254 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL +M + GV+PN   Y+TL+DG+CL GE+  A+++F +M   G   NV +YN +I
Sbjct: 238 EAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK+K V+E++NL  E+L K + P  VTY++L  G  ++ ++  AL L  EM H    
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP 357

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+  TY + +D LCKN  + +A  LF  ++    +     Y+ LIDGLCK G+ + A +L
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ L   G   NV TYN+MI G C +G +D+A  +   ME  G  P+ VTF  ++     
Sbjct: 418 FQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFE 477

Query: 243 NNETSKVVELLHRM 256
            ++  K  +LLH M
Sbjct: 478 KDQNDKAEKLLHEM 491



 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 143/251 (56%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + +   Y+TL++G C  GE   A +L   ++      NVV YNT+I+G CK 
Sbjct: 104 DKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKD 163

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V E+ +LYSEM ++GI P V+TY+TL +G     Q+  A  L +EM   ++     TY
Sbjct: 164 KLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTY 223

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              +D LCK G + EA  L   +     +  + +Y+ L+DG C IG+++ A ++F ++ +
Sbjct: 224 TILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQ 283

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ PNV +YNIMI   C   ++D+A +L  ++  K + PN VT+++L+ G  +    + 
Sbjct: 284 KGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITS 343

Query: 249 VVELLHRMDER 259
            ++LL  M  R
Sbjct: 344 ALDLLKEMYHR 354



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL ++  R  RPN  +Y+T+IDG C    ++ A +L+  MD  G   NV+TY+TLI 
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIY 193

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    + E+  L +EM+ K I P V TY  L   L +  +V+ A  L   M    V  
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKP 253

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +YNT +DG C  G +  A ++F T+        + +Y+ +ID LCK  +++ A  L 
Sbjct: 254 NVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLL 313

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    ++PN VTY+ +I GFC  G++  A DL  +M  +G   + VT+ +L+    +N
Sbjct: 314 REVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKN 373

Query: 244 NETSKVVELLHRMDER 259
               K   L  +M ER
Sbjct: 374 QNLDKATALFMKMKER 389



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 133/256 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M  +G+ P+ F  + LI+ FC  G++  +  +   +   G   N +T NTL+ 
Sbjct: 29  AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C   +V++SL+ + +++++G +   V+Y TL +GL +I +   ALKL   ++      
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YNT IDGLCK+  + EA +L+  +        +  YS LI G C  G+L  A+ L 
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +    + PNV TY I++   C +G++ +A +L   M  +GV PN V++NTLM G    
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268

Query: 244 NETSKVVELLHRMDER 259
            E     ++ H M ++
Sbjct: 269 GEVQNAKQMFHTMVQK 284



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 109/206 (52%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           ++ +N ++    K K    +++L+ +M  KGI P + T N L +    + Q+  +  +  
Sbjct: 10  IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++        T T NT + GLC  G + ++      +     ++   +Y+ L++GLCKIG
Sbjct: 70  KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +  +A +L + +      PNVV YN +I G C D  +++A+DL+ +M+A+G+ PN +T++
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
           TL+ G     +  +   LL+ M  +N
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKN 215


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 98/254 (38%), Positives = 150/254 (59%), Gaps = 3/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L + MIQR + P+   Y+ LI+GFC+   +D A+++F  M    C+ N+ TYNTLI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K VE+ + L+ EM  +G+    VTY T+  G F+    + A  +F +M  + V 
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  + GLC  G +  A  +F+ L+  + EL I  Y+ +I+G+CK GK+  AW+L
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL    + P+VVTYN MI G C+   + +A DLF  M+  G  PN  T+NTL+   +R
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+  M
Sbjct: 583 DCDRAASAELIKEM 596



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 134/237 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+QRG +P+   Y T+++G C  G+ID A  L   M+      NVV +NT+I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + VE +++L++EM +KGIRP VVTYN+L + L    +   A +L   M    + 
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  ID   K G +VEA +L   +     +     Y+ LI+G C   +L+ A ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F+ +     +PN+ TYN +I+GFC   +++   +LF +M  +G+  N VT+ T++ G
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G +P+ F ++TLI G  L  +   A  L   M   GC  ++VTY T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D++ +LNL ++M +  I+  VV +NT+   L +   VE A+ LF EM+   
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ I+ LC  G   +A+ L   +   K    +  ++ LID   K GKL  A 
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + + +  + P+ +TYN++I+GFC   ++D+A  +F  M +K   PN  T+NTL+ G 
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408

Query: 241 IRNNETSKVVELLHRMDER 259
            +       VEL   M +R
Sbjct: 409 CKCKRVEDGVELFREMSQR 427



 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 129/246 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + YS  I+ FC   ++  A  +   M   G   ++VT ++L+NGYC +K + ++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L  +M+  G +P   T+ TL HGLF  ++   A+ L D+M       +  TY T ++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G I  A  L   +   + +  +  ++ +ID LCK   +E A +LF  +   G+ PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTYN +I+  CN G+   A  L  +M  K + PN VTFN L+    +  +  +  +L  
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352

Query: 255 RMDERN 260
            M +R+
Sbjct: 353 EMIQRS 358



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 132/257 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+    S+L++G+C +  I  A  L   M   G   +  T+ TLI+
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G        E++ L  +M+ +G +P +VTY T+ +GL +   ++ AL L ++M+ + + A
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               +NT ID LCK  ++  A +LF  +        +  Y+ LI+ LC  G+   A  L 
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            ++    + PNVVT+N +I  F  +G++ +A  L  +M  + + P+ +T+N L+ G   +
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376

Query: 244 NETSKVVELLHRMDERN 260
           N   +  ++   M  ++
Sbjct: 377 NRLDEAKQMFKFMVSKD 393



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 2/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P+   ++ L+       + +    L   M   G  H++ TY+ 
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            IN +C+   +  +L + ++M+  G  P +VT ++L +G     ++  A+ L D+M    
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T T+ T I GL  +    EA  L   +    C+  +  Y  +++GLCK G ++ A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +    +  NVV +N +I   C    ++ A DLF +ME KG+ PN VT+N+L + C
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL-INC 302

Query: 241 IRN-NETSKVVELLHRMDER 259
           + N    S    LL  M E+
Sbjct: 303 LCNYGRWSDASRLLSNMLEK 322



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 16/223 (7%)

Query: 39  ARELFVSMDINGCMH--NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           A+ LFV  ++ G  +   V ++  L    C  +    +   Y E+L              
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR------------- 55

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
            + L +I +V+ A+ LF +M  S        +N  +  + K         L   ++ L  
Sbjct: 56  -NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
              +  YS  I+  C+  +L  A  +   + ++G  P++VT + +++G+C+  ++  A  
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L   M   G  P+  TF TL+ G   +N+ S+ V L+ +M +R
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 98/255 (38%), Positives = 148/255 (58%), Gaps = 1/255 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTL 61
           +ASRLL  M+++ + P+   ++ LID F   G++  A +L+  M     C  +VV YNTL
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+CK K VEE + ++ EM  +G+    VTY TL HG F+    ++A  +F +M    V
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  +DGLC NG +  A  +F  ++    +L I  Y+ +I+ LCK GK+E  W+
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF SL   G+ PNVVTY  M+ GFC  G  ++A  LF++M+  G  PN  T+NTL+   +
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542

Query: 242 RNNETSKVVELLHRM 256
           R+ + +   EL+  M
Sbjct: 543 RDGDEAASAELIKEM 557



 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 139/259 (53%), Gaps = 1/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L++ M+ +G +P+   Y  +I+G C  GE D A  L   M+      +VV YNT+I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK K ++++ +L+++M +KGI+P V TYN L   L    +   A +L  +M   ++ 
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            +   +N  ID   K G +VEA +L+   ++   C   + AY+ LI G CK  ++E   E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + + GL+ N VTY  +IHGF      D A  +F  M + GV P+ +T+N L+ G  
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437

Query: 242 RNNETSKVVELLHRMDERN 260
            N      + +   M +R+
Sbjct: 438 NNGNVETALVVFEYMQKRD 456



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 125/232 (53%), Gaps = 1/232 (0%)

Query: 3   EASRLLDLMIQ-RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA +L D M++ +   P+   Y+TLI GFC    ++   E+F  M   G + N VTY TL
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+ + +D + +  ++ +M+S G+ P ++TYN L  GL     VE AL +F+ MQ  D+
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY T I+ LCK G + +  +LF +L +   +  +  Y+ ++ G C+ G  E A  
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           LF  +   G +PN  TYN +I     DG    + +L  +M + G A +  TF
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 124/246 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   G+  N + YS  I+ FC   ++  A  +   M   G   ++VT N+L+NG+C    
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E++ L  +M+  G +P  VT+ TL HGLF+ ++   A+ L + M       +  TY  
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+GLCK G    A  L   +   K E  +  Y+ +IDGLCK   ++ A++LF  +   G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+V TYN +I   CN G+   A  L  DM  K + P+ V FN L+   ++  +  +  
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340

Query: 251 ELLHRM 256
           +L   M
Sbjct: 341 KLYDEM 346



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P+   +S L+       + D    L   M   G  HN+ TY+ 
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            IN +C+   +  +L +  +M+  G  P++VT N+L +G    +++  A+ L D+M    
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T T+ T + GL ++    EA  L   + V  C+  +  Y  +I+GLCK G+ + A 
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + +  +  +VV YN +I G C    MD A DLF  ME KG+ P+  T+N L + C
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL-ISC 294

Query: 241 IRN-NETSKVVELLHRMDERN 260
           + N    S    LL  M E+N
Sbjct: 295 LCNYGRWSDASRLLSDMLEKN 315



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 1/257 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+    ++L++GFC    I  A  L   M   G   + VT+ TL++
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G  +     E++ L   M+ KG +P +VTY  + +GL +  + + AL L ++M+   + A
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   YNT IDGLCK  ++ +A +LF  +     +  +  Y+ LI  LC  G+   A  L 
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGCIR 242
             +    + P++V +N +I  F  +G++ +A  L+ +M ++K   P+ V +NTL+ G  +
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368

Query: 243 NNETSKVVELLHRMDER 259
                + +E+   M +R
Sbjct: 369 YKRVEEGMEVFREMSQR 385



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   +   M QRG+  N   Y+TLI GF    + D A+ +F  M  +G   +++TYN 
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C   +VE +L ++  M  + ++  +VTY T+   L +  +VE    LF  +    
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY T + G C+ G   EA  LF  ++          Y+ LI    + G    + 
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           EL + +   G   +  T+  ++    +DG++DK+   FLDM
Sbjct: 552 ELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKS---FLDM 588


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 98/258 (37%), Positives = 154/258 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL +  G+ P+A VYS L+DG+CL G++++A  +F +M   G   NVV Y TL+
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ EML +GI+P+ + Y+ +  GLF+  +   A   F EM  S +A
Sbjct: 590 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GL KN    EA  LF+ LR +  ++ I   + +IDG+ +  ++E A +L
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+ R  L+PNVVTY+IMI     +G +++A D+F  M+  G  PN    N ++   ++
Sbjct: 710 FASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 769

Query: 243 NNETSKVVELLHRMDERN 260
            NE  +    L ++DERN
Sbjct: 770 KNEIVRAGAYLSKIDERN 787



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M  +G  P+ F Y+ +++G+   G +    +LF  M  +G   +  T+N 
Sbjct: 353 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNV 412

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  Y     +++++ +++EM   G++P VVTY T+   L  I +++ A++ F++M    
Sbjct: 413 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 472

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +   YN  I G C +G +++A EL   +      L I  +S +I+ LCK+G++  A 
Sbjct: 473 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 532

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F     VGL P+ V Y++++ G+C  G+M+KA  +F  M + G+ PN V + TL+ G 
Sbjct: 533 NIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 592

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + + L   M +R
Sbjct: 593 CKIGRIDEGLSLFREMLQR 611



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 139/256 (54%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M + G    PN   Y+T+IDGF   G++++A +LF  M   G   ++VTYN+
Sbjct: 213 QADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 272

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++     +M++K + P   TYN L +G     Q + A+++F EM+   
Sbjct: 273 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 332

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T +  +  LCK G I EA ++F T+ +      + +Y+ +++G    G L    
Sbjct: 333 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 392

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G+ P+  T+N++I  + N G +DKA  +F +M   GV P+ VT+ T++   
Sbjct: 393 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 452

Query: 241 IRNNETSKVVELLHRM 256
            R  +    +E  ++M
Sbjct: 453 CRIGKMDDAMEKFNQM 468



 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 38/265 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---------------------------- 42
           +++ G+R N  + + L++GFC     D A ++                            
Sbjct: 150 LLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 209

Query: 43  -------FVSMDING---CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                   + M   G   C  NVV YNT+I+G+ K  DV ++ +L+ EM+ +GI P +VT
Sbjct: 210 KSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 269

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           YN++ H L +   ++ A     +M +  V     TYN  I G    G   EA  +F+ +R
Sbjct: 270 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 329

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                  +   S L+  LCK GK++ A ++F ++   G  P+V +YNIM++G+   G + 
Sbjct: 330 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 389

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLM 237
              DLF  M   G+AP+  TFN L+
Sbjct: 390 DMTDLFDLMLGDGIAPDFYTFNVLI 414



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 125/243 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M   GV+P+   Y T+I   C  G++D A E F  M   G   +   YN 
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    + ++  L SE+++ G+   +V ++++ + L ++ +V  A  +FD   +  
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+  +DG C  G + +A  +F  +     E  +  Y  L++G CKIG+++   
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G+ P+ + Y+I+I G    G+   A   F +M   G+A +  T+N ++ G 
Sbjct: 603 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 662

Query: 241 IRN 243
            +N
Sbjct: 663 FKN 665



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 120/253 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+QRG+ P+   Y++++   C    +D+A      M     + N  TYN 
Sbjct: 248 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 307

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY  T   +E++ ++ EM    I P VVT + L   L +  +++ A  +FD M    
Sbjct: 308 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 367

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YN  ++G    G +V+  +LF  +           ++ LI      G L+ A 
Sbjct: 368 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 427

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G+ P+VVTY  +I   C  G+MD A + F  M  +GVAP+   +N L+ G 
Sbjct: 428 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 487

Query: 241 IRNNETSKVVELL 253
             +    K  EL+
Sbjct: 488 CTHGSLLKAKELI 500



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 85/157 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+QRG++P+  +YS +IDG    G    A+  F  M  +G   ++ TYN 
Sbjct: 598 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNI 657

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S 
Sbjct: 658 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 717

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +     TY+  I  L K G + EA ++F +++   CE
Sbjct: 718 LVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 754



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 22/166 (13%)

Query: 109 ALKLFDEM----QHSDVAAETS-TYNTFIDGLCKNGYIVEAA-----ELFRT-LRVLKCE 157
           A+ LF+      Q   V + TS TY   +D  C   +  E A     +L RT LRV    
Sbjct: 103 AVALFNRAASRAQGPRVLSPTSHTYAILMD-CCTRAHRPELALAFFGQLLRTGLRV---- 157

Query: 158 LGIEAYSCLIDGLCKIGKLETAWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
             I   + L++G C+  + + A + L    P +G +P+V +Y+I++   C+ G+  +A D
Sbjct: 158 -NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 216

Query: 217 LFLDMEAKGVA---PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L L M A+G A   PN V +NT++ G  +  + +K  +L   M +R
Sbjct: 217 L-LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 261



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGL--------CKNGYIV------EAAELFRTLR 152
           E A  L DE+Q           N F+  L        C++G  +       AA   +  R
Sbjct: 59  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 118

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           VL        Y+ L+D   +  + E A   F  L R GL  N++  N ++ GFC   + D
Sbjct: 119 VLSPT--SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTD 176

Query: 213 KAHDLFLDMEAK-GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +A D+ L    + G  P+  +++ L+       ++ +  +LL  M E
Sbjct: 177 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 223


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 156/259 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M++  V+P+ F Y+TL++G+ L  E+ +A+ +F +M + G   +V TY  
Sbjct: 533 VKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 592

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK+K V+E+LNL+ EM  K + P  VTY++L  GL +  ++ +   L DEM+   
Sbjct: 593 LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG 652

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TYN+ IDGLCKNG++ +A  LF  ++          ++ L+DGLCK G+L+ A 
Sbjct: 653 QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 712

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+FQ L   G   +V  YN+MI+G C  G +++A  +   ME  G  PN VTF+ ++   
Sbjct: 713 EVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772

Query: 241 IRNNETSKVVELLHRMDER 259
            + +E  K  +LL +M  R
Sbjct: 773 FKKDENDKAEKLLRQMIAR 791



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M  +G+  +   YSTLI GFC+ G++  A  L   M +     +V TY  
Sbjct: 463 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTI 522

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K   V+E+ ++ + ML   ++P V TYNTL +G   +++V+ A  +F+ M    
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   I+G CK+  + EA  LF+ +           YS L+DGLCK G++   W
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVW 642

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G   +V+TYN +I G C +G +DKA  LF  M+ +G+ PN  TF  L+ G 
Sbjct: 643 DLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702

Query: 241 IRNNETSKVVELLHRM 256
            +        E+   +
Sbjct: 703 CKGGRLKDAQEVFQDL 718



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA    D ++ +G + N   Y+TLI+G C  G+   A +    +D      NV  YNT
Sbjct: 79  VKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNT 138

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + V E+  L+SEM  KGI   VVTY+TL +G   + +++ AL L + M    
Sbjct: 139 IIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT 198

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  +D LCK G + EA  +   +     +  +  YS L+DG   + +++ A 
Sbjct: 199 INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQ 258

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++  +G+ P+V +YNIMI+GFC   ++DKA +LF +M      P  + FN ++   
Sbjct: 259 HVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSF 317

Query: 241 IRNNETSKVVELLHRMD 257
            +    S  V L HR++
Sbjct: 318 AKMKHYSTAVSLSHRLE 334



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 140/251 (55%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + N   Y+TLI+G C  G+   A +L   +D      NV  Y+T+I+  CK 
Sbjct: 401 DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKY 460

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           + V E+  L+SEM  KGI   VVTY+TL +G   + +++ A+ L +EM    +  +  TY
Sbjct: 461 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTY 520

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              +D L K G + EA  +   +     +  +  Y+ L++G   + +++ A  +F ++  
Sbjct: 521 TILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL 580

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G+ P+V TY I+I+GFC    +D+A +LF +M  K + P+ VT+++L+ G  ++   S 
Sbjct: 581 MGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISY 640

Query: 249 VVELLHRMDER 259
           V +L+  M +R
Sbjct: 641 VWDLIDEMRDR 651



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 122/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M   GV P+   Y+ LI+GFC +  +D A  LF  M     + + VTY++
Sbjct: 568 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSS 627

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK+  +    +L  EM  +G    V+TYN+L  GL +   ++ A+ LF++M+   
Sbjct: 628 LVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T T+   +DGLCK G + +A E+F+ L      L +  Y+ +I G CK G LE A 
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            +   +   G +PN VT++I+I+      + DKA  L   M A+G+
Sbjct: 748 TMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M++  V+ N   YSTL+DG+ L  E+ +A+ +F +M + G   +V +YN 
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNI 278

Query: 61  LINGYCKTKDVEESLNLYSEMLS----------------------------------KGI 86
           +ING+CK K V+++LNL+ EM+                                   KGI
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGI 338

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           +P + T N L +    + Q+     +  ++        T T NT I GLC  G + +A  
Sbjct: 339 QPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH 398

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
               L     +L   +Y+ LI+G+CKIG    A +L + +      PNV  Y+ +I   C
Sbjct: 399 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC 458

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
               + +A+ LF +M  KG++ + VT++TL+ G     +  + + LL+ M
Sbjct: 459 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEM 508



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 136/259 (52%), Gaps = 6/259 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M  +G+  N   YSTLI GFC+ G++  A  L   M +     NV TYN 
Sbjct: 149 VSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNI 208

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   V+E+ ++ + ML   ++  V+TY+TL  G F +++V+ A  +F+ M    
Sbjct: 209 LVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 268

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +YN  I+G CK   + +A  LF+ + +L     I  ++ ++D   K+    TA 
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVDKALNLFKEM-ILSRFPPIIQFNKILDSFAKMKHYSTAV 327

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            L   L   G+ P++ T NI+I+ FC+ GQ+     +   +  +G  P+ VT NTL+ G 
Sbjct: 328 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGL 387

Query: 240 CIRNNETSKVVELLHRMDE 258
           C++     +V + LH  D+
Sbjct: 388 CLK----GQVKKALHFHDK 402



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 121/244 (49%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G++P+ F  + LI+ FC  G+I     +   +   G   + VT NTLI G C    V++
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ + ++L++G +   V+Y TL +G+ +I     A+KL  ++           Y+T ID
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK   + EA  LF  + V      +  YS LI G C +GKL+ A  L   +    + P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +V TY I++     +G++ +A  +   M    V P+  T+NTLM G +   E  K   + 
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575

Query: 254 HRMD 257
           + M 
Sbjct: 576 NAMS 579



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 125/271 (46%), Gaps = 34/271 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           + +A  + + M   GV P+   Y+ +I+GFC    +D+A  LF  M              
Sbjct: 254 VKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKI 313

Query: 47  --------------------DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                               ++ G   ++ T N LIN +C    +    ++ +++L +G 
Sbjct: 314 LDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGY 373

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P+ VT NTL  GL    QV+ AL   D++          +Y T I+G+CK G    A +
Sbjct: 374 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 433

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L R +     +  +E YS +ID LCK   +  A+ LF  +   G+  +VVTY+ +I+GFC
Sbjct: 434 LLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 493

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             G++ +A  L  +M  K + P+  T+  L+
Sbjct: 494 IVGKLKEAIGLLNEMVLKTINPDVRTYTILV 524



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 93/183 (50%)

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           SL++ +++L +G  P  VT NTL  GL    QV+ AL   D++          +Y T I+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G+C+ G    A +  R +     +  +E Y+ +ID LCK   +  A+ LF  +   G+  
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NVVTY+ +I+GFC  G++ +A  L   M  K + PN  T+N L+    +  +  +   +L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 254 HRM 256
             M
Sbjct: 227 AVM 229



 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 41/81 (50%)

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           +  +   + + G  P+ VT N +I G C  GQ+ +A      + A+G   N V++ TL+ 
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  R  +T   ++ L ++D R
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGR 127


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  192 bits (489), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 145/269 (53%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+ RG+ P+   YS++IDGFC    +D A  +F  M   GC  +++T+NTLI
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYC+ K V++ + L  EM   G+    +TY TL HG  ++  +  A  L  EM  S V 
Sbjct: 369 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC 428

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-----------CELGIEAYSCLIDGLC 171
               T NT +DGLC NG + +A E+F+ ++  K            E  ++ Y+ LI GL 
Sbjct: 429 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLI 488

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TYN +IHG C   ++D+A  +F  M +K  +PN V
Sbjct: 489 NEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVV 548

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TF TL+ G  +       +EL   M  R 
Sbjct: 549 TFTTLINGYCKAGRVDDGLELFCEMGRRG 577



 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 142/265 (53%), Gaps = 11/265 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +LL  M + G+  N   Y+TLI GFC  G+++ A++L   M  +G   NVVT NT
Sbjct: 377 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNT 436

Query: 61  LINGYCKTKDVEESLNLYSEMLSK-----------GIRPTVVTYNTLFHGLFEIHQVEHA 109
           L++G C    ++++L ++  M              G+ P V TYN L  GL    +   A
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEA 496

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
            +L++EM H  +  +T TYN+ I GLCK   + EA ++F ++        +  ++ LI+G
Sbjct: 497 EELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 556

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            CK G+++   ELF  + R G++ N +TY  +IHGF   G ++ A D+F +M A GV P+
Sbjct: 557 YCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPD 616

Query: 230 CVTFNTLMLGCIRNNETSKVVELLH 254
            +T   ++ G     E  + V +L 
Sbjct: 617 TITIRNMLTGLWSKEELKRAVAMLE 641



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 7/263 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD-INGCMHNVVTY--- 58
           EA  LLD M++ G++PN   Y T++DG C  G+   A  L   M+ ++    NVV +   
Sbjct: 197 EAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLE 256

Query: 59  --NTLINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
               +ING+C +    E+  L  EML  K I P VVTYN L +   +  +   A +L+DE
Sbjct: 257 RRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDE 316

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M    +   T TY++ IDG CK   +  A  +F  +    C   I  ++ LI G C+  +
Sbjct: 317 MLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKR 376

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++   +L   +   GL+ N +TY  +IHGFC  G ++ A DL  +M + GV PN VT NT
Sbjct: 377 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNT 436

Query: 236 LMLGCIRNNETSKVVELLHRMDE 258
           L+ G   N +    +E+   M +
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQK 459



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 140/267 (52%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM  +G  P+   ++TLI G+C    +D   +L   M   G + N +TY T
Sbjct: 342 LDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 401

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+  D+  + +L  EM+S G+ P VVT NTL  GL +  +++ AL++F  MQ S 
Sbjct: 402 LIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 461

Query: 121 -----------VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
                      V  +  TYN  I GL   G  +EA EL+  +           Y+ +I G
Sbjct: 462 MDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHG 521

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      PNVVT+  +I+G+C  G++D   +LF +M  +G+  N
Sbjct: 522 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 581

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+ TL+ G  +    +  +++   M
Sbjct: 582 AITYITLIHGFRKVGNINGALDIFQEM 608



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 149/270 (55%), Gaps = 12/270 (4%)

Query: 3   EASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA +LL  M++R  + P+   Y+ LI+ F   G+   A EL+  M   G + + +TY+++
Sbjct: 273 EAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSM 332

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   ++ + +++  M +KG  P ++T+NTL  G     +V+  +KL  EM  + +
Sbjct: 333 IDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 392

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A T TY T I G C+ G +  A +L + +        +   + L+DGLC  GKL+ A E
Sbjct: 393 VANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALE 452

Query: 182 LFQSL-----------PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           +F+++           P  G+ P+V TYNI+I G  N+G+  +A +L+ +M  +G+ P+ 
Sbjct: 453 MFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 512

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +T+N+++ G  + +   +  ++   M  ++
Sbjct: 513 ITYNSVIHGLCKQSRLDEATQMFDSMGSKS 542



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 25/240 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD-----------IN 49
           ++ A  LL  M+  GV PN    +TL+DG C  G++  A E+F +M             N
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   +V TYN LI+G        E+  LY EM  +GI P  +TYN++ HGL +  +++ A
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA------- 162
            ++FD M     +    T+ T I+G CK G + +  ELF       CE+G          
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF-------CEMGRRGIVANAIT 584

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y  LI G  K+G +  A ++FQ +   G+ P+ +T   M+ G  +  ++ +A  +  D++
Sbjct: 585 YITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 131/267 (49%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   +  L+      G +D    L   M++     N  ++  
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  +C    +  +L+ + ++   G  PTVVT++TL HGL    ++  AL LF +M   +
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPN 178

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T+ T ++GLC+ G +VEA  L   +     +     Y  ++DG+CK+G   +A 
Sbjct: 179 VV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 181 ELFQSLPRVG-LMPNVVTYNI-----MIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTF 233
            L + +  V  + PNVV + +     MI+GFC+ G+  +A  L  +M E K ++P+ VT+
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           N L+   ++  +  +  EL   M  R 
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRG 321



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 79/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   Y+++I G C    +D A ++F SM       NVVT+ TLI
Sbjct: 495 EAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V++ L L+ EM  +GI    +TY TL HG  ++  +  AL +F EM  S V 
Sbjct: 555 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + GL     +  A  +   L++
Sbjct: 615 PDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 72/119 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   PN   ++TLI+G+C  G +D   ELF  M   G + N +TY T
Sbjct: 528 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 587

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G+ K  ++  +L+++ EM++ G+ P  +T   +  GL+   +++ A+ + +++Q S
Sbjct: 588 LIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 99/198 (50%), Gaps = 4/198 (2%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G+ + K +E++++L+ +M+     P+V+ +  L   +  + +++  + L  +M+   
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     ++   +   C    +  A   F  +  L     +  +S L+ GLC   ++  A 
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + +    PNVVT+  +++G C +G++ +A  L   M   G+ PN +T+ T++ G 
Sbjct: 169 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 225 CKMGDTVSALNLLRKMEE 242


>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
 gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
          Length = 319

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 154/259 (59%), Gaps = 5/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  ++  MI++GV PN   YS+L++G+ L   +  AR++F +M   GC+ +V++YN 
Sbjct: 26  ISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMITRGCIPDVLSYNI 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK + ++E+  ++ EM  +G+ P   TYNTL  G ++       ++LF +M    
Sbjct: 86  LINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWK-----QKIQLFKDMHAQG 140

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TY+ F+ GL K GY+ +A ELFR ++       +  Y+ LID +CK GKLE A 
Sbjct: 141 CSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDAR 200

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  L   GL+P+V ++  +I G C +G +D+A+  F  ME  G  P+C ++N ++ G 
Sbjct: 201 ELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGF 260

Query: 241 IRNNETSKVVELLHRMDER 259
           ++NN  S+  +L   M +R
Sbjct: 261 LQNNGASRAEQLFQEMFDR 279



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M S  I P  VT+N L   L +  ++  A  +   M    V   T TY++ ++G      
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           + EA ++F  +    C   + +Y+ LI+G CK  +++ A ++F  +   GL+PN  TYN 
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           ++ GF       +   LF DM A+G +P+ VT++  + G  +     + +EL   M
Sbjct: 121 LLGGF-----WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREM 171



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 72/138 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M    + P+  +Y+ LID  C +G+++ ARELF+ + + G + +V ++ +
Sbjct: 161 LDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTS 220

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C+   ++E+   + +M   G  P   +YN +  G  + +    A +LF EM    
Sbjct: 221 IISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRG 280

Query: 121 VAAETSTYNTFIDGLCKN 138
            +A+  T     D L K+
Sbjct: 281 FSADALTRTLAADLLSKD 298



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 54/97 (55%)

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           ++ L+D LCK GK+  A  + +++   G+ PN VTY+ +++G+    ++ +A  +F  M 
Sbjct: 13  FNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMI 72

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +G  P+ +++N L+ GC +     +  ++   M  R
Sbjct: 73  TRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFR 109



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 40/69 (57%)

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           +MP+ VT+NI++   C  G++ +A  +   M  KGV PN VT+++LM G +  N   +  
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 251 ELLHRMDER 259
           ++ + M  R
Sbjct: 66  KVFNAMITR 74


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 155/259 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M+++G++P+ F Y++L+D +CL  E+++A+ +F ++   G   N+ +Y+ 
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+CK K V+E++NL+ EM    I P VVTYN+L  GL ++ ++ +ALKL DEM    
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYN+ +D LCKN  + +A  L   ++    +  I  Y+ L+DGLCK G+LE A 
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR 477

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ L   G + +V  Y  MI GFC+ G  D++ DL   ME  G  PN VT+  ++   
Sbjct: 478 IVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSL 537

Query: 241 IRNNETSKVVELLHRMDER 259
              +E  K  +LL  M  R
Sbjct: 538 FDKDENDKAEKLLREMITR 556



 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 144/257 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +  D ++  G   N   Y TLI+G C  G+   A +L   +D      NVV YNT+I
Sbjct: 160 QALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTII 219

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K V E+ +LYSEM+SKGI P VVTYN L  G   + +++ A  LF++M   ++ 
Sbjct: 220 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENIN 279

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +DG CK   + EA  +   +     +  +  Y+ L+D  C + ++  A  +
Sbjct: 280 PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHI 339

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++ + G+ PN+ +Y+IMIHGFC   ++D+A +LF +M    + P+ VT+N+L+ G  +
Sbjct: 340 FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCK 399

Query: 243 NNETSKVVELLHRMDER 259
             + S  ++L+  M +R
Sbjct: 400 LGKISYALKLVDEMHDR 416



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   M+ +G+ P+   Y+ LI GFC+ G++  A +LF  M       NV T+N 
Sbjct: 228 VNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNI 287

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK + ++E+ N+ + M+ +GI+P V TYN+L      + +V  A  +F+ +    
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     +Y+  I G CK   + EA  LF+ +        +  Y+ LIDGLCK+GK+  A 
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYAL 407

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+  + +TYN ++   C + Q+DKA  L   M+ +G+ P+  T+ TL+ G 
Sbjct: 408 KLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGL 467

Query: 241 IRNN--ETSKVV 250
            +N   E +++V
Sbjct: 468 CKNGRLEDARIV 479



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 141/255 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  +  + V+PN  +Y+T+ID  C    ++ A +L+  M   G   +VVTYN LI+
Sbjct: 196 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALIS 255

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    ++++ +L+++M+ + I P V T+N L  G  +  +++ A  +   M    +  
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKP 315

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ +D  C    + +A  +F T+        I +YS +I G CKI K++ A  LF
Sbjct: 316 DVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF 375

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    ++P+VVTYN +I G C  G++  A  L  +M  +GV  + +T+N+++    +N
Sbjct: 376 KEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN 435

Query: 244 NETSKVVELLHRMDE 258
           ++  K + LL +M +
Sbjct: 436 HQVDKAIALLTKMKD 450



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 115/230 (50%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           L+ Q+  +P+ F +  ++     +        L   M+ NG   ++V  + LIN + +  
Sbjct: 62  LLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLG 121

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
               S ++ +++L  G  P V+T  TL  GL    Q+  AL+  D++          +Y 
Sbjct: 122 QNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYG 181

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T I+GLCK G    A +L R +     +  +  Y+ +ID +CK+  +  A++L+  +   
Sbjct: 182 TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 241

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           G+ P+VVTYN +I GFC  G+M  A DLF  M  + + PN  TFN L+ G
Sbjct: 242 GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDG 291



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 62/132 (46%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +   +  L K+ +      L R +        +   S LI+   ++G+   ++ +   + 
Sbjct: 75  FGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKIL 134

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           ++G  PNV+T   +I G C  GQ+ +A      + A G   N V++ TL+ G  +  +TS
Sbjct: 135 KMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTS 194

Query: 248 KVVELLHRMDER 259
             ++LL R+D +
Sbjct: 195 AALQLLRRVDGK 206


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 152/256 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M ++G  PNA+ Y+ L+DG+CL  ++D A ++   M   GC  N+ +YN 
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK+K + E+  L SEM  K + P  VTY+TL  GL ++ +   AL LF EM  S 
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+  +DG CK+G++ EA +L + +   + +  I  Y+ LI G+   GKLE A 
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAK 501

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  L   G+ P++ TYN+MI G   +G  D+A++ F  ME  G  P+  ++N ++ G 
Sbjct: 502 ELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGF 561

Query: 241 IRNNETSKVVELLHRM 256
           ++N ++S  ++L+  M
Sbjct: 562 LQNQDSSTAIQLIDEM 577



 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 142/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M+  G  PN   Y+T+I+G C  G    A  +F  M+ N    NVVTYNT
Sbjct: 182 IKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNT 241

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + V E++   SEM+ +GI P VVTYNT+ HG   + Q+  A +LF EM   +
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +T T+N  +DGLCK G + EA  +  T+     E     Y+ L+DG C   +++ A 
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAI 361

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G  PN+ +YNI+I+G+C   +M++A  L  +M  K + P+ VT++TLM G 
Sbjct: 362 KVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421

Query: 241 IRNNETSKVVELLHRM 256
            +     + + L   M
Sbjct: 422 CQVGRPREALNLFKEM 437



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 139/260 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++  M + G++P+A  ++TLI+G C  G+I  A  LF  M  +G   NV++YNT
Sbjct: 147 VDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNT 206

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +   ++ ++ +M     +P VVTYNT+   L +   V  A++   EM    
Sbjct: 207 VINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRG 266

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT + G C  G + EA  LF+ +           ++ L+DGLCK G +  A 
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEAR 326

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + +++   G  PN  TYN ++ G+C   QMD+A  +   M  KG APN  ++N L+ G 
Sbjct: 327 CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGY 386

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++   ++   LL  M E+N
Sbjct: 387 CKSKRMNEAKRLLSEMSEKN 406



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M++   RP+   +   +       +   A  L   MD+ G  HNV + N 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  C+   V+ ++++  +M   GI+P  +T+NTL +GL    +++ A+ LF+EM  S 
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YNT I+GLCKNG  + A  +FR +   + +  +  Y+ +ID LCK   +  A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G+ P+VVTYN ++HGFC+ GQ+++A  LF +M  + V P+ VTFN L+ G 
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 241 IRNNETSKVVELLHRMDER 259
            +    S+   +   M E+
Sbjct: 317 CKEGMVSEARCVSETMTEK 335



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA   L  M+ RG+ P+   Y+T++ GFC  G+++ A  LF  M     M + VT+N 
Sbjct: 252 VNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNI 311

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   V E+  +   M  KG  P   TYN L  G    +Q++ A+K+   M    
Sbjct: 312 LVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A   S+YN  I+G CK+  + EA  L   +           YS L+ GLC++G+   A 
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   GL+P+++ Y+I++ GFC  G +D+A  L  +M  + + PN + +  L+ G 
Sbjct: 432 NLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGM 491

Query: 241 IRNNETSKVVELLHRM 256
               +     EL  ++
Sbjct: 492 FIAGKLEVAKELFSKL 507



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 129/256 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R+   M Q   +PN   Y+T+ID  C    ++ A E    M   G   +VVTYNT+++
Sbjct: 220 AVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILH 279

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    + E+  L+ EM+ + + P  VT+N L  GL +   V  A  + + M       
Sbjct: 280 GFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP 339

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  +DG C +  + EA ++   +    C   + +Y+ LI+G CK  ++  A  L 
Sbjct: 340 NAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLL 399

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +    L P+ VTY+ ++ G C  G+  +A +LF +M + G+ P+ + ++ L+ G  ++
Sbjct: 400 SEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKH 459

Query: 244 NETSKVVELLHRMDER 259
               + ++LL  M ER
Sbjct: 460 GHLDEALKLLKEMHER 475



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 119/237 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++L +MI +G  PN   Y+ LI+G+C +  ++ A+ L   M       + VTY+T
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+     E+LNL+ EM S G+ P ++ Y+ L  G  +   ++ ALKL  EM    
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y   I G+   G +  A ELF  L        I  Y+ +I GL K G  + A+
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E F+ +   G +P+  +YN++I GF  +     A  L  +M  K  + +  TF  L+
Sbjct: 537 EFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 110/225 (48%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           ID A   F  M       +VV +   +    K K    +++L ++M   G+   V + N 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L + L  +  V+ A+ +  +M    +  +  T+NT I+GLC  G I EA  LF  +    
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
            E  + +Y+ +I+GLCK G    A  +F+ + +    PNVVTYN +I   C D  +++A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +   +M  +G+ P+ VT+NT++ G     + ++   L   M  RN
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 72/133 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +LL  M +R ++PN  +Y+ LI G  + G+++ A+ELF  +  +G   ++ TYN 
Sbjct: 462 LDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNV 521

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G  K    +E+   + +M   G  P   +YN +  G  +      A++L DEM    
Sbjct: 522 MIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKR 581

Query: 121 VAAETSTYNTFID 133
            +A++ST+   +D
Sbjct: 582 FSADSSTFQMLLD 594


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 147/269 (54%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+ RG+ PN   YS++IDGFC    +D A  +F  M   GC  N++T+NTLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K +++ + L  EM   G+     TYNTL HG + +  +  AL L  EM  S + 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-----------GIEAYSCLIDGLC 171
            +  T +T +DGLC NG + +A E+F+ ++  K +L            ++ Y+ LI GL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TY+ MI G C   ++D+A  +F  M +K  +PN V
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TF TL+ G  +       +EL   M  R 
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRG 611



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM  +G  PN   ++TLIDG+C    ID   EL   M   G + +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+    D+  +L+L  EM+S G+ P +VT +TL  GL +  +++ AL++F  MQ S 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 121 -----------VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
                      V  +  TYN  I GL   G  +EA EL+  +           YS +IDG
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      PNVVT+  +I+G+C  G++D   +LF +M  +G+  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+ TL+ G  +    +  +++   M
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEM 642



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M +   RPN   ++TL++G C  G I  A  L   M  +G     +TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +++G CK  D   +LNL  +M     I P VV Y+ +   L +  +   A  LF EMQ  
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TYN+ I G C +G   +A +L + +   K    +  Y+ LI+   K GK   A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 180 WELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            EL+ + LPR G++PN +TY+ MI GFC   ++D A  +F  M  KG +PN +TFNTL+ 
Sbjct: 345 EELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 239 GCIRNNETSKVVELLHRMDE 258
           G          +ELLH M E
Sbjct: 404 GYCGAKRIDDGMELLHEMTE 423



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 123/241 (51%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +YS +ID  C  G    A+ LF  M   G   ++ TYN++I G+C +    ++  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML + I P VVTYN L +   +  +   A +L+DEM    +   T TY++ IDG CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +  A  +F  +    C   +  ++ LIDG C   +++   EL   +   GL+ +  T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN +IHGF   G ++ A DL  +M + G+ P+ VT +TL+ G   N +    +E+   M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 258 E 258
           +
Sbjct: 493 K 493



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 129/251 (51%), Gaps = 1/251 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++ +R + + ++ LI  FC   ++  A   F  +   G   +VVT+NTL++G C    
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+LNL+ +M     RP VVT+ TL +GL    ++  A+ L D M    +     TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 131 FIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            +DG+CK G  V A  L R +  V      +  YS +ID LCK G+   A  LF  +   
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ P++ TYN MI GFC+ G+   A  L  +M  + ++P+ VT+N L+   ++  +  + 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 250 VELLHRMDERN 260
            EL   M  R 
Sbjct: 345 EELYDEMLPRG 355



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   +  L+         D    L+  M+      ++ ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G+ P VVT+NTL HGL    +V  AL LF +M  + 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+ T ++GLC+ G IVEA  L   +     +     Y  ++DG+CK G   +A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  V  ++PNVV Y+ +I   C DG+   A +LF +M+ KG+ P+  T+N++++G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S   +LL  M ER 
Sbjct: 300 FCSSGRWSDAEQLLQEMLERK 320



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 79/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++IDG C    +D A ++F SM       NVVT+ TLI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V++ L L+ EM  +GI    +TY TL  G  ++  +  AL +F EM  S V 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + GL     +  A  +   L++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 71/119 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   PN   ++TLI+G+C  G +D   ELF  M   G + N +TY T
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  ++  +L+++ EM+S G+ P  +T   +  GL+   +++ A+ + +++Q S
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 98/198 (49%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G+ + K +E++++L+S+ML     P+VV +  L   +  + + +  + L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++   I   C    +  A   F  L  L     +  ++ L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +      PNVVT+  +++G C +G++ +A  L   M   G+ P  +T+ T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 147/269 (54%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+ RG+ PN   YS++IDGFC    +D A  +F  M   GC  N++T+NTLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K +++ + L  EM   G+     TYNTL HG + +  +  AL L  EM  S + 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-----------GIEAYSCLIDGLC 171
            +  T +T +DGLC NG + +A E+F+ ++  K +L            ++ Y+ LI GL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TY+ MI G C   ++D+A  +F  M +K  +PN V
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TF TL+ G  +       +EL   M  R 
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRG 611



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM  +G  PN   ++TLIDG+C    ID   EL   M   G + +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+    D+  +L+L  EM+S G+ P +VT +TL  GL +  +++ AL++F  MQ S 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 121 -----------VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
                      V  +  TYN  I GL   G  +EA EL+  +           YS +IDG
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      PNVVT+  +I+G+C  G++D   +LF +M  +G+  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+ TL+ G  +    +  +++   M
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEM 642



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 133/262 (50%), Gaps = 6/262 (2%)

Query: 2   DEASRLLDL---MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           D  S  LD    M +   RPN   ++TL++G C  G I  A  L   M  +G     +TY
Sbjct: 163 DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
            T+++G CK  D   +LNL  +M     I P VV Y+ +   L +  +   A  LF EMQ
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +  +  TYN+ I G C +G   +A +L + +   K    +  Y+ LI+   K GK  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 178 TAWELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            A EL+ + LPR G++PN +TY+ MI GFC   ++D A  +F  M  KG +PN +TFNTL
Sbjct: 343 EAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           + G          +ELLH M E
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTE 423



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 123/241 (51%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +YS +ID  C  G    A+ LF  M   G   ++ TYN++I G+C +    ++  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML + I P VVTYN L +   +  +   A +L+DEM    +   T TY++ IDG CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +  A  +F  +    C   +  ++ LIDG C   +++   EL   +   GL+ +  T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN +IHGF   G ++ A DL  +M + G+ P+ VT +TL+ G   N +    +E+   M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 258 E 258
           +
Sbjct: 493 K 493



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 127/251 (50%), Gaps = 1/251 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++ +R + + ++ LI  FC   ++  A   F  +   G   +VVT+ TL++G C    
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L+ + +M     RP VVT+ TL +GL    ++  A+ L D M    +     TY T
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 131 FIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            +DG+CK G  V A  L R +  V      +  YS +ID LCK G+   A  LF  +   
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ P++ TYN MI GFC+ G+   A  L  +M  + ++P+ VT+N L+   ++  +  + 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 250 VELLHRMDERN 260
            EL   M  R 
Sbjct: 345 EELYDEMLPRG 355



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   +  L+         D    L+  M+      ++ ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G+ P VVT+ TL HGL    +V  AL  F +M  + 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+ T ++GLC+ G IVEA  L   +     +     Y  ++DG+CK G   +A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  V  ++PNVV Y+ +I   C DG+   A +LF +M+ KG+ P+  T+N++++G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S   +LL  M ER 
Sbjct: 300 FCSSGRWSDAEQLLQEMLERK 320



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 79/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++IDG C    +D A ++F SM       NVVT+ TLI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V++ L L+ EM  +GI    +TY TL  G  ++  +  AL +F EM  S V 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + GL     +  A  +   L++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 71/119 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   PN   ++TLI+G+C  G +D   ELF  M   G + N +TY T
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  ++  +L+++ EM+S G+ P  +T   +  GL+   +++ A+ + +++Q S
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 99/198 (50%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G+ + K +E++++L+S+ML     P+VV +  L   +  + + +  + L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++N  I   C    +  A   F  +  L     +  ++ L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F  +      PNVVT+  +++G C +G++ +A  L   M   G+ P  +T+ T++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 147/269 (54%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+ RG+ PN   YS++IDGFC    +D A  +F  M   GC  N++T+NTLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K +++ + L  EM   G+     TYNTL HG + +  +  AL L  EM  S + 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-----------GIEAYSCLIDGLC 171
            +  T +T +DGLC NG + +A E+F+ ++  K +L            ++ Y+ LI GL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TY+ MI G C   ++D+A  +F  M +K  +PN V
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TF TL+ G  +       +EL   M  R 
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRG 611



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM  +G  PN   ++TLIDG+C    ID   EL   M   G + +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+    D+  +L+L  EM+S G+ P +VT +TL  GL +  +++ AL++F  MQ S 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 121 -----------VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
                      V  +  TYN  I GL   G  +EA EL+  +           YS +IDG
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      PNVVT+  +I+G+C  G++D   +LF +M  +G+  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+ TL+ G  +    +  +++   M
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEM 642



 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 133/260 (51%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M +   RPN   ++TL++G C  G I  A  L   M  +G     +TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 61  LINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +++G CK  D   +L+L  +M     I P VV Y+ +   L +  +   A  LF EMQ  
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TYN+ I G C +G   +A +L + +   K    +  Y+ LI+   K GK   A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 180 WELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            EL+ + LPR G++PN +TY+ MI GFC   ++D A  +F  M  KG +PN +TFNTL+ 
Sbjct: 345 EELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 239 GCIRNNETSKVVELLHRMDE 258
           G          +ELLH M E
Sbjct: 404 GYCGAKRIDDGMELLHEMTE 423



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 123/241 (51%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +YS +ID  C  G    A+ LF  M   G   ++ TYN++I G+C +    ++  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML + I P VVTYN L +   +  +   A +L+DEM    +   T TY++ IDG CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +  A  +F  +    C   +  ++ LIDG C   +++   EL   +   GL+ +  T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN +IHGF   G ++ A DL  +M + G+ P+ VT +TL+ G   N +    +E+   M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 258 E 258
           +
Sbjct: 493 K 493



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 131/251 (52%), Gaps = 1/251 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++ +R + + ++ LI  FC   ++  A   F  +   G   +VVT+NTL++G C    
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+LNL+ +M     RP VVT+ TL +GL    ++  A+ L D M    +     TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCEL-GIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            +DG+CK G  V A +L R +  +   +  +  YS +ID LCK G+   A  LF  +   
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ P++ TYN MI GFC+ G+   A  L  +M  + ++P+ VT+N L+   ++  +  + 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 250 VELLHRMDERN 260
            EL   M  R 
Sbjct: 345 EELYDEMLPRG 355



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   +  L+         D    L+  M+      ++ ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G+ P VVT+NTL HGL    +V  AL LF +M  + 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+ T ++GLC+ G IVEA  L   +     +     Y  ++DG+CKIG   +A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +  +  ++PNVV Y+ +I   C DG+   A +LF +M+ KG+ P+  T+N++++G
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S   +LL  M ER 
Sbjct: 300 FCSSGRWSDAEQLLQEMLERK 320



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 79/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++IDG C    +D A ++F SM       NVVT+ TLI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V++ L L+ EM  +GI    +TY TL  G  ++  +  AL +F EM  S V 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + GL     +  A  +   L++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 71/119 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   PN   ++TLI+G+C  G +D   ELF  M   G + N +TY T
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  ++  +L+++ EM+S G+ P  +T   +  GL+   +++ A+ + +++Q S
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 147/269 (54%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+ RG+ PN   YS++IDGFC    +D A  +F  M   GC  N++T+NTLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K +++ + L  EM   G+     TYNTL HG + +  +  AL L  EM  S + 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-----------GIEAYSCLIDGLC 171
            +  T +T +DGLC NG + +A E+F+ ++  K +L            ++ Y+ LI GL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TY+ MI G C   ++D+A  +F  M +K  +PN V
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TF TL+ G  +       +EL   M  R 
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRG 611



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM  +G  PN   ++TLIDG+C    ID   EL   M   G + +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+    D+  +L+L  EM+S G+ P +VT +TL  GL +  +++ AL++F  MQ S 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 121 -----------VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
                      V  +  TYN  I GL   G  +EA EL+  +           YS +IDG
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      PNVVT+  +I+G+C  G++D   +LF +M  +G+  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+ TL+ G  +    +  +++   M
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEM 642



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M +   RPN   ++TL++G C  G I  A  L   M  +G     +TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +++G CK  D   +LNL  +M     I P VV Y+ +   L +  +   A  LF EMQ  
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TYN+ I G C +G   +A +L + +   K    +  Y+ LI+   K GK   A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 180 WELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            EL+ + LPR G++PN +TY+ MI GFC   ++D A  +F  M  KG +PN +TFNTL+ 
Sbjct: 345 EELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 239 GCIRNNETSKVVELLHRMDE 258
           G          +ELLH M E
Sbjct: 404 GYCGAKRIDDGMELLHEMTE 423



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 123/241 (51%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +YS +ID  C  G    A+ LF  M   G   ++ TYN++I G+C +    ++  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML + I P VVTYN L +   +  +   A +L+DEM    +   T TY++ IDG CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +  A  +F  +    C   +  ++ LIDG C   +++   EL   +   GL+ +  T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN +IHGF   G ++ A DL  +M + G+ P+ VT +TL+ G   N +    +E+   M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 258 E 258
           +
Sbjct: 493 K 493



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 129/251 (51%), Gaps = 1/251 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++ +R + + ++ LI  FC   ++  A   F  +   G   +VVT+NTL++G C    
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+LNL+ +M     RP VVT+ TL +GL    ++  A+ L D M    +     TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 131 FIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            +DG+CK G  V A  L R +  V      +  YS +ID LCK G+   A  LF  +   
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ P++ TYN MI GFC+ G+   A  L  +M  + ++P+ VT+N L+   ++  +  + 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 250 VELLHRMDERN 260
            EL   M  R 
Sbjct: 345 EELYDEMLPRG 355



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   +  L+         D    L+  M+      ++ ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G+ P VVT+NTL HGL    +V  AL LF +M  + 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+ T ++GLC+ G IVEA  L   +     +     Y  ++DG+CK G   +A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  V  ++PNVV Y+ +I   C DG+   A +LF +M+ KG+ P+  T+N++++G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S   +LL  M ER 
Sbjct: 300 FCSSGRWSDAEQLLQEMLERK 320



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 79/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++IDG C    +D A ++F SM       NVVT+ TLI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V++ L L+ EM  +GI    +TY TL  G  ++  +  AL +F EM  S V 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + GL     +  A  +   L++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 71/119 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   PN   ++TLI+G+C  G +D   ELF  M   G + N +TY T
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  ++  +L+++ EM+S G+ P  +T   +  GL+   +++ A+ + +++Q S
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 98/198 (49%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G+ + K +E++++L+S+ML     P+VV +  L   +  + + +  + L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++   I   C    +  A   F  +  L     +  ++ L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +      PNVVT+  +++G C +G++ +A  L   M   G+ P  +T+ T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 147/269 (54%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+ RG+ PN   YS++IDGFC    +D A  +F  M   GC  N++T+NTLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K +++ + L  EM   G+     TYNTL HG + +  +  AL L  EM  S + 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-----------GIEAYSCLIDGLC 171
            +  T +T +DGLC NG + +A E+F+ ++  K +L            ++ Y+ LI GL 
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TY+ MI G C   ++D+A  +F  M +K  +PN V
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TF TL+ G  +       +EL   M  R 
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRG 611



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM  +G  PN   ++TLIDG+C    ID   EL   M   G + +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+    D+  +L+L  EM+S G+ P +VT +TL  GL +  +++ AL++F  MQ S 
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 121 -----------VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
                      V  +  TYN  I GL   G  +EA EL+  +           YS +IDG
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      PNVVT+  +I+G+C  G++D   +LF +M  +G+  N
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+ TL+ G  +    +  +++   M
Sbjct: 616 AITYITLICGFRKVGNINGALDIFQEM 642



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M +   RPN   ++TL++G C  G I  A  L   M  +G     +TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +++G CK  D   +LNL  +M     I P VV Y+ +   L +  +   A  LF EMQ  
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TYN+ I G C +G   +A +L + +   K    +  Y+ LI+   K GK   A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 180 WELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            EL+ + LPR G++PN +TY+ MI GFC   ++D A  +F  M  KG +PN +TFNTL+ 
Sbjct: 345 EELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 239 GCIRNNETSKVVELLHRMDE 258
           G          +ELLH M E
Sbjct: 404 GYCGAKRIDDGMELLHEMTE 423



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 123/241 (51%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +YS +ID  C  G    A+ LF  M   G   ++ TYN++I G+C +    ++  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML + I P VVTYN L +   +  +   A +L+DEM    +   T TY++ IDG CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +  A  +F  +    C   +  ++ LIDG C   +++   EL   +   GL+ +  T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN +IHGF   G ++ A DL  +M + G+ P+ VT +TL+ G   N +    +E+   M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 258 E 258
           +
Sbjct: 493 K 493



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 1/251 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++ +R + + ++ LI  FC   ++  A   F  +   G   +VVT+ TL++G C    
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+LNL+ +M     RP VVT+ TL +GL    ++  A+ L D M    +     TY T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 131 FIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            +DG+CK G  V A  L R +  V      +  YS +ID LCK G+   A  LF  +   
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ P++ TYN MI GFC+ G+   A  L  +M  + ++P+ VT+N L+   ++  +  + 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 250 VELLHRMDERN 260
            EL   M  R 
Sbjct: 345 EELYDEMLPRG 355



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   +  L+         D    L+  M+      ++ ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G+ P VVT+ TL HGL    +V  AL LF +M  + 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+ T ++GLC+ G IVEA  L   +     +     Y  ++DG+CK G   +A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  V  ++PNVV Y+ +I   C DG+   A +LF +M+ KG+ P+  T+N++++G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S   +LL  M ER 
Sbjct: 300 FCSSGRWSDAEQLLQEMLERK 320



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 79/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++IDG C    +D A ++F SM       NVVT+ TLI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V++ L L+ EM  +GI    +TY TL  G  ++  +  AL +F EM  S V 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + GL     +  A  +   L++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 71/119 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   PN   ++TLI+G+C  G +D   ELF  M   G + N +TY T
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  ++  +L+++ EM+S G+ P  +T   +  GL+   +++ A+ + +++Q S
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 99/198 (50%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G+ + K +E++++L+S+ML     P+VV +  L   +  + + +  + L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++N  I   C    +  A   F  +  L     +  ++ L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +      PNVVT+  +++G C +G++ +A  L   M   G+ P  +T+ T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 151/269 (56%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ L D M+ RG+ PN   Y+++IDGFC    +D A ++F  M   GC  +V T+ TLI
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K +++ + L  EM  +G+    VTYNTL HG   +  +  AL L  +M  S V 
Sbjct: 403 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 462

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-------GIEA----YSCLIDGLC 171
            +  T NT +DGLC NG + +A E+F+ ++  K +L       G+E     Y+ LI GL 
Sbjct: 463 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 522

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TY+ MI G C   ++D+A  +F+ M +K  +PN V
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 582

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TFNTL+ G  +       +EL   M  R 
Sbjct: 583 TFNTLINGYCKAGRVDDGLELFCEMGRRG 611



 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 145/267 (54%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM  +G  P+ F ++TLIDG+C    ID   EL   M   G + N VTYNT
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C   D+  +L+L  +M+S G+ P +VT NTL  GL +  +++ AL++F  MQ S 
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 121 VAAETS-----------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           +  + S           TYN  I GL   G  +EA EL+  +           YS +IDG
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      PNVVT+N +I+G+C  G++D   +LF +M  +G+  +
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            + + TL+ G  +    +  +++   M
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEM 642



 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 127/241 (52%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +YS +ID  C  G    A+ LF  M   G   ++ TYN++I G+C +    ++  L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML + I P VVTYN L +   +  +   A +L+DEM    +   T TYN+ IDG CK
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +  A ++F  +    C   +  ++ LIDG C   +++   EL   +PR GL+ N VT
Sbjct: 373 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 432

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN +IHGFC  G ++ A DL   M + GV P+ VT NTL+ G   N +    +E+   M 
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 492

Query: 258 E 258
           +
Sbjct: 493 K 493



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 132/264 (50%), Gaps = 6/264 (2%)

Query: 2   DEASRLLDL---MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           D  S  LD    M +   RPN   ++TL++G C  G I  A  L   M  +G     +TY
Sbjct: 163 DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
            T+++G CK  D   +LNL  +M     I P VV Y+ +   L +  +   A  LF EMQ
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +  +  TYN+ I G C +G   +A +L + +   K    +  Y+ LI+   K GK  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 178 TAWELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            A EL+ + LPR G++PN +TYN MI GFC   ++D A D+F  M  KG +P+  TF TL
Sbjct: 343 EAAELYDEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 401

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G          +ELLH M  R 
Sbjct: 402 IDGYCGAKRIDDGMELLHEMPRRG 425



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 127/251 (50%), Gaps = 1/251 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++ +R + + ++ LI  FC   ++  A   F  +   G   +VVT+ TL++G C    
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L+ + +M     RP VVT+ TL +GL    ++  A+ L D M    +     TY T
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 131 FIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            +DG+CK G  V A  L R +  V      +  YS +ID LCK G+   A  LF  +   
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ P++ TYN MI GFC+ G+   A  L  +M  + ++P+ VT+N L+   ++  +  + 
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 250 VELLHRMDERN 260
            EL   M  R 
Sbjct: 345 AELYDEMLPRG 355



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   +  L+         D    L+  M+      ++ ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G+ P VVT+ TL HGL    +V  AL  F +M  + 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+ T ++GLC+ G IVEA  L   +     +     Y  ++DG+CK G   +A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  V  ++PNVV Y+ +I   C DG+   A +LF +M+ KG+ P+  T+N++++G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S   +LL  M ER 
Sbjct: 300 FCSSGRWSDAEQLLQEMLERK 320



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 80/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++IDG C    +D A ++FVSM       NVVT+NTLI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V++ L L+ EM  +GI    + Y TL +G  ++  +  AL +F EM  S V 
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 648

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + G      +  A  +   L++
Sbjct: 649 PDTITIRNMLTGFWSKEELERAVAMLEDLQM 679



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 99/198 (50%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G+ + K +E++++L+S+ML     P+VV +  L   +  + + +  + L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++N  I   C    +  A   F  +  L     +  ++ L+ GLC   ++  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F  +      PNVVT+  +++G C +G++ +A  L   M   G+ P  +T+ T++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 68/119 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++   M  +   PN   ++TLI+G+C  G +D   ELF  M   G + + + Y T
Sbjct: 562 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 621

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  ++  +L+++ EM+S G+ P  +T   +  G +   ++E A+ + +++Q S
Sbjct: 622 LIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 680


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 149/250 (59%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M + G+ PN   YST+I GFC   ++D A +LF  M  NGCM N+VTYNTL++G C
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++E+  L  EM  +G++P   +Y+TL  GL +  +++ ALK+F++  + D   +  
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y+T I GLCK G + EA +LF  +R   CE  +  ++ L+DGLCK  +L+ A ++ +++
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
                 PNV+TY+ +I G C  GQ+  A ++F  M  +G+ PN VT+N+L+ G    N  
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 247 SKVVELLHRM 256
              + L+  M
Sbjct: 304 DSALLLMEEM 313



 Score =  186 bits (473), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 148/259 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L + M +    P+   ++ L+DG C    +  A+++  +M+   C  NV+TY++
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CKT  V ++  ++  M+ +GI P VVTYN+L HG    + V+ AL L +EM  + 
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYNT IDGLCK G   EA  LF  ++   C   +  YSCLI G CK+ +++ A 
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  + +  ++P+VVT++ ++ G+CN G +D A  L  +M A   +P+  T+ +L+ G 
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 437

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +   +L RM +R
Sbjct: 438 CKVGRMVEARRVLKRMAKR 456



 Score =  180 bits (456), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 141/255 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +   MI RG+ PN   Y++LI GFC+T  +D A  L   M   GC+ +++TYNTLI
Sbjct: 270 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 329

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CKT    E+  L+ +M +K   P V+TY+ L  G  ++ +++ A  LFD+M    V 
Sbjct: 330 DGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL 389

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T++T ++G C  G + +A  L   +    C   +  Y+ L+DG CK+G++  A  +
Sbjct: 390 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 449

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + G  PNVVTY  +I  FC  G+   A+ L  +M   GV PN +T+ +L+ G   
Sbjct: 450 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCG 509

Query: 243 NNETSKVVELLHRMD 257
             +  +  ++L R++
Sbjct: 510 TGDLEEARKMLERLE 524



 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 140/239 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  LLD M +RG++P+ F Y TL+ G C TG+ID A ++F       C  +VV Y+T
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CKT  ++E+  L+ +M      P VVT+  L  GL +  +++ A ++ + M+  +
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ IDGLCK G + +A E+F+ + V   E  +  Y+ LI G C    +++A 
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +   G +P+++TYN +I G C  G+  +A+ LF DM+AK   P+ +T++ L+ G
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 366



 Score =  166 bits (421), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 138/259 (53%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L++ M   G  P+   Y+TLIDG C TG    A  LF  M    C  +V+TY+ 
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK + ++ +  L+ +ML + + P VVT++TL  G      V+ A +L +EM  SD
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TY + +DG CK G +VEA  + + +    C+  +  Y+ LID  C+ GK   A+
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 482

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLMLG 239
           +L + +   G+ PNV+TY  +I GFC  G +++A  +   +E  +    +   +  +M G
Sbjct: 483 KLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDG 542

Query: 240 CIRNNETSKVVELLHRMDE 258
             R    S  +ELL  + +
Sbjct: 543 LCRTGRMSAALELLEAIKQ 561



 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 126/242 (52%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   ++ +IDG C    +  A   F  M   G + N  TYN LING+CK   V  +  L 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM   G+ P VVTY+T+ HG     +V+ A KLF +M  +       TYNT + GLC+N
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA EL   +R    +    +Y  L+ GLCK GK++ A ++F+        P+VV Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + +I G C  G++D+A  LF  M      P+ VTF  LM G  + +   +  ++L  M++
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 259 RN 260
           RN
Sbjct: 246 RN 247



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 2/239 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L D M+++ V P+   +STL++G+C  G +D A  L   M  + C  +V TY +
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   + E+  +   M  +G +P VVTY  L        +   A KL +EM  + 
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           V     TY + I G C  G + EA ++   L R   C+  + AY  ++DGLC+ G++  A
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAA 552

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME-AKGVAPNCVTFNTLM 237
            EL +++ + G  P    Y  +I G C   ++ KA ++  +M  ++   PN   +  ++
Sbjct: 553 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 611



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 109/208 (52%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  NV+T+  +I+G CK   + E+   +++M  KG  P   TYN L +G  ++H+V  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
            L  EM+ S +A    TY+T I G C+   +  A +LFR +    C   +  Y+ L+ GL
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C+ G ++ A+EL   +   GL P+  +Y+ ++ G C  G++D A  +F D       P+ 
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDE 258
           V ++TL+ G  +     +  +L  +M E
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRE 210



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 63/105 (60%)

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           ++CE  +  ++ +IDGLCK  +L  A   F  + + G +PN  TYN++I+GFC   ++ +
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           A+ L  +M+  G+APN VT++T++ G  R  +     +L  +M E
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE 105


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 154/257 (59%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L +M++ GV PN   YS+L+DG+CL  ++++A+ +  ++   G   N  +Y T+IN
Sbjct: 297 AKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMIN 356

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K V+E+L+L+++M  KGI P  VTYN+L  GL +  ++ +A +L DEM  +   A
Sbjct: 357 GFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPA 416

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  ID LCKN ++ +A  L + ++    +  +  ++ LI GLCK+G+L+ A ++F
Sbjct: 417 NIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVF 476

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q L   G   N  TYNIM++G C +G  D+A  L   M+  G+ P+ VT+ TL+      
Sbjct: 477 QDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHK 536

Query: 244 NETSKVVELLHRMDERN 260
           +E  K  +LL  M  R+
Sbjct: 537 DENEKAEKLLREMIARD 553



 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 145/258 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   M+ + + P+ + ++ L+D  C  G +  A+ + V M   G M NVVTY++
Sbjct: 259 LEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSS 318

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC    V ++ ++ + +   G  P   +Y T+ +G  +I  V+ AL LF++MQ   
Sbjct: 319 LMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKG 378

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  TYN+ IDGLCK+G I  A EL   +        I  Y+CLID LCK   ++ A 
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAI 438

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G+ P++ T+NI+I+G C  G++  A D+F D+ +KG + N  T+N ++ G 
Sbjct: 439 ALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGL 498

Query: 241 IRNNETSKVVELLHRMDE 258
            +     +   LL +MD+
Sbjct: 499 CKEGLFDEAEALLSKMDD 516



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  ++  +++ G  P+   ++TLI G CL G++  A      +   G   +  +Y T
Sbjct: 119 MNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGT 178

Query: 61  LINGYCKTKDVEESLN-----------------------------------LYSEMLSKG 85
           LING CK  +   +L                                    LYS+M++K 
Sbjct: 179 LINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKK 238

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I P VVT++ L +G   + Q+E A  LF EM   ++  +  T+N  +D LCK G +  A 
Sbjct: 239 ISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAK 298

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +   +        +  YS L+DG C + ++  A  +  ++ ++G  PN  +Y  MI+GF
Sbjct: 299 NMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGF 358

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C    +D+A  LF DM+ KG+AP+ VT+N+L+ G  ++   S   EL+  M +
Sbjct: 359 CKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHD 411



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 133/245 (54%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
            G+ P+ F ++ LI+ +C   E++ A  +   +   G   + +T+NTLI G C    V+E
Sbjct: 97  HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ +  +L+ G      +Y TL +GL +I +   AL++  ++    V      YNT ID
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIID 216

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK+  +++A EL+  +   K    +  +S LI G C +G+LE A+ LF+ +    + P
Sbjct: 217 SLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINP 276

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +  T+NI++   C +G +  A ++ + M  +GV PN VT+++LM G    N+ +K   +L
Sbjct: 277 DYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVL 336

Query: 254 HRMDE 258
           + + +
Sbjct: 337 NTISQ 341



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA    D ++  G   + F Y TLI+G C  GE   A ++   +D      NVV YNT
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK K V ++  LYS+M++K I P VVT++ L +G   + Q+E A  LF EM   +
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273

Query: 121 VAAETSTYNTFIDGLCKNG-----------------------------------YIVEAA 145
           +  +  T+N  +D LCK G                                    + +A 
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +  T+  +       +Y  +I+G CKI  ++ A  LF  +   G+ P+ VTYN +I G 
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G++  A +L  +M   G   N  T+N L+    +N+   + + L+ ++ ++
Sbjct: 394 CKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQ 447



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 117/226 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +L+ + Q G  PNA  Y T+I+GFC    +D A  LF  M   G   + VTYN+
Sbjct: 329 VNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNS 388

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+  +  +  L  EM   G    + TYN L   L + H V+ A+ L  +++   
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  I GLCK G +  A ++F+ L      +    Y+ +++GLCK G  + A 
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAE 508

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   +   G++P+ VTY  +I    +  + +KA  L  +M A+ V
Sbjct: 509 ALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 107/192 (55%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           ++ +G   ++ T+N LIN YC   ++  + ++ +++L  G  P  +T+NTL  GL    +
Sbjct: 94  LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           V+ AL   D +       +  +Y T I+GLCK G    A ++ R +     ++ +  Y+ 
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +ID LCK   +  A+EL+  +    + P+VVT++ +I+GFC  GQ+++A  LF +M  K 
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273

Query: 226 VAPNCVTFNTLM 237
           + P+  TFN L+
Sbjct: 274 INPDYYTFNILV 285



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 54  NVVTYNTLINGYCKTKD--VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           +++ +N ++    K+ +     +++L   +   GI P + T+N L +    + ++  A  
Sbjct: 65  SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           +  ++       +T T+NT I GLC NG + EA      +  L   L   +Y  LI+GLC
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           KIG+  TA ++ + +    +  NVV YN +I   C    +  A++L+  M AK ++P+ V
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244

Query: 232 TFNTLMLG-CI 241
           TF+ L+ G CI
Sbjct: 245 TFSALIYGFCI 255



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 74/156 (47%), Gaps = 2/156 (1%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCK--NGYIVEAAELFRTLRVLKCELGIEAY 163
           V++ +  F+ +  +   +    +N  +  L K  N +   A  L R L        I  +
Sbjct: 47  VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + LI+  C + ++  A+ +   + ++G  P+ +T+N +I G C +G++ +A      + A
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            G   +  ++ TL+ G  +  ET   +++L ++D +
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGK 202


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/258 (38%), Positives = 150/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  RL+D +   GVRP+   Y+TLIDG CL G ID A +L   M   G   N  +YNTL+
Sbjct: 153 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLL 212

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++ + +L+ +MLS GI P VVTYNT+ HGLF+  +   A +L+  M +S   
Sbjct: 213 HGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 272

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT ++GLCK+  + EA ++F++L     +L I  ++ +I  L K G+ E A +L
Sbjct: 273 WGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 332

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++P  GL+P+VVTY ++      +G +++   LF  ME  G APN    N L+   + 
Sbjct: 333 FAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 392

Query: 243 NNETSKVVELLHRMDERN 260
             + S+    L ++DERN
Sbjct: 393 RGDISRAGAYLSKLDERN 410



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 142/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E   LL+LM+  G+ PN  +++     +   G ID+A ++F  M  +G   + V+Y  
Sbjct: 11  LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGA 70

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V+++   +++M+++G+ P +V +++L +GL  I + E   +LF EM +  
Sbjct: 71  LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVG 130

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      +NT +  LCK G ++E   L  ++  +     + +Y+ LIDG C  G ++ A 
Sbjct: 131 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 190

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +  VGL PN  +YN ++HG+C  G++D A+ LF  M + G+ P  VT+NT++ G 
Sbjct: 191 KLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGL 250

Query: 241 IRNNETSKVVELLHRM 256
            +    S+  EL   M
Sbjct: 251 FQTKRFSEAKELYLNM 266



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M Q G+ P+A  Y  LID  C  G +D A   F  M   G   N+V +++
Sbjct: 46  IDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSS 105

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C     E+   L+ EML+ GI P +V +NT+   L +  +V    +L D ++   
Sbjct: 106 LVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMG 165

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +YNT IDG C  G I EA++L   +  +  +    +Y+ L+ G CK G++++A+
Sbjct: 166 VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAY 225

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ P VVTYN ++HG     +  +A +L+L+M   G      T+NT++ G 
Sbjct: 226 SLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGL 285

Query: 241 IRNNETSKVVELLHRM 256
            ++N   +  ++   +
Sbjct: 286 CKSNCVDEAFKMFQSL 301



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  GV PN  V+S+L+ G C   + ++  ELF  M   G   N+V +NT
Sbjct: 81  VDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNT 140

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVV----------------------------- 91
           ++   CK   V E   L   +   G+RP V+                             
Sbjct: 141 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 200

Query: 92  ------TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                 +YNTL HG  +  +++ A  LF +M  + +     TYNT + GL +     EA 
Sbjct: 201 LKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 260

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EL+  +     + GI  Y+ +++GLCK   ++ A+++FQSL   GL  N++T+ IMI   
Sbjct: 261 ELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 320

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
              G+ + A DLF  + A G+ P+ VT+  +    I      +   L   M++
Sbjct: 321 LKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEK 373



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEAS+LL+ M+  G++PN+F Y+TL+ G+C  G ID A  LF  M  NG    VVTYNT
Sbjct: 186 IDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNT 245

Query: 61  LI-----------------------------------NGYCKTKDVEESLNLYSEMLSKG 85
           ++                                   NG CK+  V+E+  ++  + SKG
Sbjct: 246 ILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKG 305

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           ++  ++T+  +   L +  + E A+ LF  +  + +  +  TY    + L + G + E  
Sbjct: 306 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFD 365

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            LF  +         +  + L+  L   G +  A      L          T +++I  F
Sbjct: 366 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 425

Query: 206 CNDGQMDKAHDL 217
            +D     A  L
Sbjct: 426 SSDEYQHHAKSL 437



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 66/154 (42%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++   +  +G++ N   ++ +I      G  + A +LF ++  NG + +VVTY  
Sbjct: 291 VDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRV 350

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +     +   +EE  +L+S M   G  P     N L   L     +  A     ++   +
Sbjct: 351 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 410

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + E ST +  I     + Y   A  L +  R+L
Sbjct: 411 FSVEASTTSMLISIFSSDEYQHHAKSLPKKYRIL 444


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 151/269 (56%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ L D M+ RG+ PN   Y+++IDGFC    +D A ++F  M   GC  +V T+ TLI
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K +++ + L  EM  +G+    VTYNTL HG   +  +  AL L  +M  S V 
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-------GIEA----YSCLIDGLC 171
            +  T NT +DGLC NG + +A E+F+ ++  K +L       G+E     Y+ LI GL 
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TY+ MI G C   ++D+A  +F+ M +K  +PN V
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TFNTL+ G  +       +EL   M  R 
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRG 609



 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 129/243 (53%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++PN  +YS +IDG C  G    +  LF+ M   G   N+VTYN +I G+C +     + 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EML + I P VVTYN L +   +  +   A +L+DEM    +   T TYN+ IDG 
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK   +  A ++F  +    C   +  ++ LIDG C   +++   EL   +PR GL+ N 
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTYN +IHGFC  G ++ A DL   M + GV P+ VT NTL+ G   N +    +E+   
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 256 MDE 258
           M +
Sbjct: 489 MQK 491



 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 145/267 (54%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM  +G  P+ F ++TLIDG+C    ID   EL   M   G + N VTYNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C   D+  +L+L  +M+S G+ P +VT NTL  GL +  +++ AL++F  MQ S 
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 121 VAAETS-----------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           +  + S           TYN  I GL   G  +EA EL+  +           YS +IDG
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      PNVVT+N +I+G+C  G++D   +LF +M  +G+  +
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            + + TL+ G  +    +  +++   M
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEM 640



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 4/258 (1%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           S  LDL  Q   RP+   ++TL++G C  G +  A  L   M  NG   + +TY T ++G
Sbjct: 168 SEALDLFHQI-CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDG 226

Query: 65  YCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            CK  D   +LNL  +M     I+P VV Y+ +  GL +  +   +  LF EMQ   +  
Sbjct: 227 MCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP 286

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  I G C +G    A  L + +   K    +  Y+ LI+   K GK   A EL+
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346

Query: 184 -QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + LPR G++PN +TYN MI GFC   ++D A D+F  M  KG +P+  TF TL+ G   
Sbjct: 347 DEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG 405

Query: 243 NNETSKVVELLHRMDERN 260
                  +ELLH M  R 
Sbjct: 406 AKRIDDGMELLHEMPRRG 423



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   ++ L+         D    L+  M+      ++ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G+ P VVT+ TL HGL   H+V  AL LF ++   D
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T+ T ++GLC+ G +VEA  L   +     +     Y   +DG+CK+G   +A 
Sbjct: 182 VL----TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  +  + PNVV Y+ +I G C DG+   +H+LF++M+ KG+ PN VT+N ++ G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S    LL  M ER 
Sbjct: 298 FCISGRWSAAQRLLQEMLERK 318



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 80/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++IDG C    +D A ++FVSM       NVVT+NTLI
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V++ L L+ EM  +GI    + Y TL +G  ++  +  AL +F EM  S V 
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + G      +  A  +   L++
Sbjct: 647 PDTITIRNMLTGFWSKEELERAVAMLEDLQM 677



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 68/119 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++   M  +   PN   ++TLI+G+C  G +D   ELF  M   G + + + Y T
Sbjct: 560 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  ++  +L+++ EM+S G+ P  +T   +  G +   ++E A+ + +++Q S
Sbjct: 620 LIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 678


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 151/269 (56%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ L D M+ RG+ PN   Y+++IDGFC    +D A ++F  M   GC  +V T+ TLI
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K +++ + L  EM  +G+    VTYNTL HG   +  +  AL L  +M  S V 
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-------GIEA----YSCLIDGLC 171
            +  T NT +DGLC NG + +A E+F+ ++  K +L       G+E     Y+ LI GL 
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TY+ MI G C   ++D+A  +F+ M +K  +PN V
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           TFNTL+ G  +       +EL   M  R 
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRG 609



 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 129/243 (53%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++PN  +YS +IDG C  G    +  LF+ M   G   N+VTYN +I G+C +     + 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EML + I P VVTYN L +   +  +   A +L+DEM    +   T TYN+ IDG 
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK   +  A ++F  +    C   +  ++ LIDG C   +++   EL   +PR GL+ N 
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTYN +IHGFC  G ++ A DL   M + GV P+ VT NTL+ G   N +    +E+   
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 256 MDE 258
           M +
Sbjct: 489 MQK 491



 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 145/267 (54%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM  +G  P+ F ++TLIDG+C    ID   EL   M   G + N VTYNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C   D+  +L+L  +M+S G+ P +VT NTL  GL +  +++ AL++F  MQ S 
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 121 VAAETS-----------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           +  + S           TYN  I GL   G  +EA EL+  +           YS +IDG
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      PNVVT+N +I+G+C  G++D   +LF +M  +G+  +
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            + + TL+ G  +    +  +++   M
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEM 640



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 4/258 (1%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           S  LDL  Q   RP+   ++TL++G C  G +  A  L   M  NG   + +TY T ++G
Sbjct: 168 SEALDLFHQI-CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDG 226

Query: 65  YCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            CK  D   +LNL  +M     I+P VV Y+ +  GL +  +   +  LF EMQ   +  
Sbjct: 227 MCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP 286

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  I G C +G    A  L + +   K    +  Y+ LI+   K GK   A EL+
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346

Query: 184 -QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + LPR G++PN +TYN MI GFC   ++D A D+F  M  KG +P+  TF TL+ G   
Sbjct: 347 DEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG 405

Query: 243 NNETSKVVELLHRMDERN 260
                  +ELLH M  R 
Sbjct: 406 AKRIDDGMELLHEMPRRG 423



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   ++ L+         D    L+  M+      ++ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G+ P VVT+ TL HGL   H+V  AL LF ++   D
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T+ T ++GLC+ G +VEA  L   +     +     Y   +DG+CK+G   +A 
Sbjct: 182 VL----TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  +  + PNVV Y+ +I G C DG+   +H+LF++M+ KG+ PN VT+N ++ G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S    LL  M ER 
Sbjct: 298 FCISGRWSAAQRLLQEMLERK 318



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++IDG C    +D A ++FVSM       NVVT+NTLI
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V++ L L+ EM  +GI    + Y TL +G  ++  +  AL +F EM  S V 
Sbjct: 587 NGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
            +T T    + G      +  A  +   L+  + E
Sbjct: 647 PDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 69/124 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++   M  +   PN   ++TLI+G+C  G +D   ELF  M   G + + + Y T
Sbjct: 560 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+ K  ++  +L+++ EM+S G+ P  +T   +  G +   ++E A+ + +++Q   
Sbjct: 620 LIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQ 679

Query: 121 VAAE 124
           +  E
Sbjct: 680 LEDE 683


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 154/258 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL +  G+ P+A VY+ L+DG+CL G++++A  +F +M   G   NVV Y TL+
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ EML +GI+P+ + Y+ +  GLFE  +   A   F EM  S +A
Sbjct: 580 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GL KN    EA  LF+ LR +  ++ I   + +IDG+ +  ++E A +L
Sbjct: 640 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 699

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+ R  L+P+VVTY+IMI     +G +++A D+F  M+  G  PN    N ++   ++
Sbjct: 700 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 759

Query: 243 NNETSKVVELLHRMDERN 260
            NE  +    L ++DERN
Sbjct: 760 KNEIVRAGAYLSKIDERN 777



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M  +G  P+ F Y+ +++G+   G +    +LF  M  +G   +  T+N 
Sbjct: 343 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNV 402

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  Y     +++++ +++EM   G++P VVTY T+   L  I +++ A++ F++M    
Sbjct: 403 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 462

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +   YN  I G C +G +++A EL   +      L I  +S +I+ LCK+G++  A 
Sbjct: 463 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 522

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F     VGL P+ V YN+++ G+C  G+M+KA  +F  M + G+ PN V + TL+ G 
Sbjct: 523 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 582

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + + L   M +R
Sbjct: 583 CKIGRIDEGLSLFREMLQR 601



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 139/256 (54%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M + G    PN   Y+T+IDGF   G++++A +LF  M   G   ++VTYN+
Sbjct: 203 QADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 262

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++     +M++K + P   TYN L +G     Q + A+++F EM+   
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 322

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T +  +  LCK G I EA ++F T+ +      + +Y+ +++G    G L    
Sbjct: 323 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 382

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G+ P+  T+N++I  + N G +DKA  +F +M   GV P+ VT+ T++   
Sbjct: 383 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 442

Query: 241 IRNNETSKVVELLHRM 256
            R  +    +E  ++M
Sbjct: 443 CRIGKMDDAMEKFNQM 458



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 38/265 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---------------------------- 42
           +++ G+R N  + + L++GFC     D A ++                            
Sbjct: 140 LLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 199

Query: 43  -------FVSMDING---CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                   + M   G   C  NVV YNT+I+G+ K  DV ++ +L+ EM+ +GI P +VT
Sbjct: 200 KSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 259

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           YN++ H L +   ++ A     +M +  V     TYN  I G    G   EA  +F+ +R
Sbjct: 260 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 319

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                  +   S L+  LCK GK++ A ++F ++   G  P+V +YNIM++G+   G + 
Sbjct: 320 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 379

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLM 237
              DLF  M   G+AP+  TFN L+
Sbjct: 380 DMTDLFDLMLGDGIAPDFYTFNVLI 404



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 125/243 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M   GV+P+   Y T+I   C  G++D A E F  M   G   +   YN 
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    + ++  L SE+++ G+   +V ++++ + L ++ +V  A  +FD   +  
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  +DG C  G + +A  +F  +     E  +  Y  L++G CKIG+++   
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 592

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G+ P+ + Y+I+I G    G+   A   F +M   G+A +  T+N ++ G 
Sbjct: 593 SLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 652

Query: 241 IRN 243
            +N
Sbjct: 653 FKN 655



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 120/253 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+QRG+ P+   Y++++   C    +D+A      M     + N  TYN 
Sbjct: 238 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 297

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY  T   +E++ ++ EM    I P VVT + L   L +  +++ A  +FD M    
Sbjct: 298 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 357

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YN  ++G    G +V+  +LF  +           ++ LI      G L+ A 
Sbjct: 358 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 417

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G+ P+VVTY  +I   C  G+MD A + F  M  +GVAP+   +N L+ G 
Sbjct: 418 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 477

Query: 241 IRNNETSKVVELL 253
             +    K  EL+
Sbjct: 478 CTHGSLLKAKELI 490



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 85/157 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+QRG++P+  +YS +IDG    G    A+  F  M  +G   ++ TYN 
Sbjct: 588 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNI 647

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S 
Sbjct: 648 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 707

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +     TY+  I  L K G + EA ++F +++   CE
Sbjct: 708 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 744



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 22/166 (13%)

Query: 109 ALKLFDEM----QHSDVAAETS-TYNTFIDGLCKNGYIVEAA-----ELFRT-LRVLKCE 157
           A+ LF+      Q   V + TS TY   +D  C   +  E A     +L RT LRV    
Sbjct: 93  AVALFNRAASRAQGPRVLSPTSHTYAILMD-CCTRAHRPELALAFFGQLLRTGLRV---- 147

Query: 158 LGIEAYSCLIDGLCKIGKLETAWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
             I   + L++G C+  + + A + L    P +G +P+V +Y+I++   C+ G+  +A D
Sbjct: 148 -NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 206

Query: 217 LFLDMEAKGVA---PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L L M A+G A   PN V +NT++ G  +  + +K  +L   M +R
Sbjct: 207 L-LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 251



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGL--------CKNGYIV------EAAELFRTLR 152
           E A  L DE+Q           N F+  L        C++G  +       AA   +  R
Sbjct: 49  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 108

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           VL        Y+ L+D   +  + E A   F  L R GL  N++  N ++ GFC   + D
Sbjct: 109 VLSPT--SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTD 166

Query: 213 KAHDLFLDMEAK-GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +A D+ L    + G  P+  +++ L+       ++ +  +LL  M E
Sbjct: 167 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 213


>gi|414591640|tpg|DAA42211.1| TPA: hypothetical protein ZEAMMB73_215753 [Zea mays]
          Length = 299

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 154/258 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL +  G+ P+A VYS L+DG+CL G++++A  +F +M   G   NVV Y TL+
Sbjct: 2   DAQNIFDLKVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 61

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ EML +GI+P+ + Y+ +  GLF+  +   A   F EM  S +A
Sbjct: 62  NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 121

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GL KN    EA  LF+ LR +  ++ I   + +IDG+ +  ++E A +L
Sbjct: 122 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 181

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+ R  L+P+VVTY+IMI     +G +++A D+F  M+  G  PN    N ++   ++
Sbjct: 182 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 241

Query: 243 NNETSKVVELLHRMDERN 260
            NE  +    L ++DERN
Sbjct: 242 KNEIVRAGAYLSKIDERN 259



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 85/157 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+QRG++P+  +YS +IDG    G    A+  F  M  +G   ++ TYN 
Sbjct: 70  IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNI 129

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S 
Sbjct: 130 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 189

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +     TY+  I  L K G + EA ++F +++   CE
Sbjct: 190 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 226


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/256 (38%), Positives = 146/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M++RG  PN   Y+T+I+G C TG    A ++F  M+ NGC  +VVTYNT
Sbjct: 174 IKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNT 233

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + V +++   SEML +GI P V TYN + HG   + Q+  A +LF EM   D
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +T T    +DGLCK G + EA  +F T+     E  I  Y+ L+DG C    +  A 
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAK 353

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ + R G  P V +YNI+I+GFC   +MD+A  L  +M  K + P+ VT++TLM G 
Sbjct: 354 KVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413

Query: 241 IRNNETSKVVELLHRM 256
            +     + + +   M
Sbjct: 414 CQFGRPKEALNIFKEM 429



 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 153/256 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M ++GV PN   Y+ L+DG+CL   ++ A+++F  M   GC   V +YN 
Sbjct: 314 VSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNI 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK++ ++E+ +L +EM  K + P  VTY+TL  GL +  + + AL +F EM    
Sbjct: 374 LINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYG 433

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  +DG CK+G++ EA +L ++++  K E  I  ++ LI+G+   GKLE A 
Sbjct: 434 LLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAK 493

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  L   G+ P + TY +MI G   +G  D+A+DLF  ME  G  PN  ++N ++ G 
Sbjct: 494 ELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 553

Query: 241 IRNNETSKVVELLHRM 256
           ++N ++S  + L+  M
Sbjct: 554 LQNQDSSTAIRLIDEM 569



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A   L  M+ RG+ PN F Y+ ++ GFC+ G+++ A  LF  M     M + VT   
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTI 303

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   V E+  ++  M  KG+ P + TYN L  G      +  A K+F+ M    
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A    +YN  I+G CK+  + EA  L   +           YS L+ GLC+ G+ + A 
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   GL+PN+VTY+I++ GFC  G +D+A  L   M+ K + PN V    L+ G 
Sbjct: 424 NIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGM 483

Query: 241 IRNNETSKVVELLHRM 256
               +     EL  ++
Sbjct: 484 FIAGKLEVAKELFSKL 499



 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 130/244 (53%), Gaps = 3/244 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  N +  + LI+  C    +D A  +   M   G      T+N LING C    ++E+
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEA 177

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L++EM+ +G  P V++YNT+ +GL +      A+ +F +M+ +    +  TYNT ID 
Sbjct: 178 VELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + +A E    +        +  Y+C++ G C +G+L  A  LF+ +    +MP+
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
            VT  I++ G C +G + +A  +F  M  KGV PN  T+N LM G C++   NE  KV E
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357

Query: 252 LLHR 255
           ++ R
Sbjct: 358 IMIR 361



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 131/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M++   RP+   +   +  F    +      L   MD+ G  HNV + N 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  C+   V+ ++++  +M   GI PT  T+N L +GL    +++ A++LF+EM    
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YNT I+GLCK G    A ++F+ +    C+  +  Y+ +ID LCK   +  A 
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G+ PNV TYN M+HGFC  GQ+++A  LF +M  + V P+ VT   L+ G 
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 241 IRNNETSKVVELLHRMDER 259
            +    S+   +   M E+
Sbjct: 309 CKEGMVSEARLVFETMTEK 327



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 76/166 (45%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M   G+ PN   YS L+DGFC  G +D A +L  SM       N+V +  LI
Sbjct: 421 EALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILI 480

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G      +E +  L+S++ + GIRPT+ TY  +  GL +    + A  LF +M+     
Sbjct: 481 EGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL 540

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
             + +YN  I G  +N     A  L   +   +    +  +  L+D
Sbjct: 541 PNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 69/133 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +LL  M ++ + PN   ++ LI+G  + G+++ A+ELF  +  +G    + TY  
Sbjct: 454 LDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTV 513

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G  K    +E+ +L+ +M   G  P   +YN +  G  +      A++L DEM    
Sbjct: 514 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 573

Query: 121 VAAETSTYNTFID 133
            +A  ST+   +D
Sbjct: 574 FSANLSTFQMLLD 586


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/257 (38%), Positives = 150/257 (58%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA +LL  M++ G R N   YST++DG    G ++ A  +   M   GC+ + VTYNT
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K + + E++ L  EML  G  P+VVTY TL HGL    + + A+++ D M    
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
            A    TY++ +DGLCK G + EA   F  + R       + AYS LIDGLCK GK++ A
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEA 438

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +E  + + R G +P+VVT++I+I+G C+ G++D   +LF  M  +G  P+ VT+ TL+  
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDR 498

Query: 240 CIRNNETSKVVELLHRM 256
             R +   +  +L  +M
Sbjct: 499 LCRASRVDEAFDLFQQM 515



 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 3/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+ + + P+   Y  LIDG      +  A +LF      GC   VVTYNT
Sbjct: 11  VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 70

Query: 61  LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +I+G CK   +E +L LY +M +  G RPTVVTY+TL  GL   H+V+   KL +EM   
Sbjct: 71  MIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGR 130

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             A    TYNT ++ L   G   EA  L   +    C   +  +  +I GLCK G++E A
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAA 190

Query: 180 WELFQSLPRV--GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + +   +  +  GL P+V+T+N ++ G C + ++  AH++F     +G  PN VT++TL+
Sbjct: 191 FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 250

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G  +  +  + ++LL +M E
Sbjct: 251 DGLSKMAKMDEALQLLAKMVE 271



 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 133/259 (51%), Gaps = 1/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +    ++RG RPN   YSTLIDG     ++D A +L   M   GC  N VTY+T++
Sbjct: 226 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 285

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   +E+++ +  +M   G  P  VTYNTL  G F+  ++  A+ L  EM  +   
Sbjct: 286 DGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH 345

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY T   GLC++G   EA E+   +    C      YS ++DGLCK G++  A   
Sbjct: 346 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 405

Query: 183 FQSLPRVGLM-PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           F+ + R  ++ P+V+ Y+ +I G C  G++D+A++    M   G  P+ VTF+ L+ G  
Sbjct: 406 FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465

Query: 242 RNNETSKVVELLHRMDERN 260
                   +EL   M ER 
Sbjct: 466 DAGRIDTGLELFRGMAERG 484



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 133/252 (52%), Gaps = 2/252 (0%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D+ I  G RP    YSTLIDG C   E+D+  +L   M   GC  N VTYNTL+N     
Sbjct: 90  DMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQ 149

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE--MQHSDVAAETS 126
              +E+ +L  +M + G  P ++T+  +  GL +  ++E A ++ DE  M  S ++ +  
Sbjct: 150 GRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVI 209

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N+ +DGLCK   I++A  +F+      C   +  YS LIDGL K+ K++ A +L   +
Sbjct: 210 TFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 269

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +G   N VTY+ ++ G    G+M+ A  +   M   G  P+ VT+NTL+ G  +    
Sbjct: 270 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRL 329

Query: 247 SKVVELLHRMDE 258
            + V LL  M E
Sbjct: 330 REAVGLLREMLE 341



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI--NGCMHNVVTYNT 60
           EA  LL+ M   G  P    +  +I G C  GEI+ A  +   M +  +G   +V+T+N+
Sbjct: 154 EAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNS 213

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK + + ++ N++   L +G RP VVTY+TL  GL ++ +++ AL+L  +M    
Sbjct: 214 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 273

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A T TY+T +DGL K G + +A  + R +R   C      Y+ LIDG  K  +L  A 
Sbjct: 274 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 333

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G  P+VVTY  + HG C  G+ D+A ++   M A+G APN +T+++++ G 
Sbjct: 334 GLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 393

Query: 241 IRNNETSKVVELLHRM 256
            +    ++ +    +M
Sbjct: 394 CKAGRVTEALGYFEKM 409



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 2/262 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +LL+ M  RG  PNA  Y+TL++     G    A  L   M  NGC   ++T+  
Sbjct: 117 VDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGL 176

Query: 61  LINGYCKTKDVEESLNLYSEM--LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           +I G CK  ++E +  +  EM  +  G+ P V+T+N++  GL +  ++  A  +F     
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                   TY+T IDGL K   + EA +L   +  L C      YS ++DGL K+G++E 
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  + + +   G +P+ VTYN +I GF    ++ +A  L  +M   G  P+ VT+ TL  
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G  R+    + VE+L  M  R 
Sbjct: 357 GLCRSGRFDEAVEILDYMAARG 378



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 1/206 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M++ G  P+   Y+TL  G C +G  D A E+   M   GC  N +TY++
Sbjct: 329 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 388

Query: 61  LINGYCKTKDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +++G CK   V E+L  + +M   + + P V+ Y+ L  GL +  +++ A +  + M  +
Sbjct: 389 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T++  I+GLC  G I    ELFR +    C   +  Y+ L+D LC+  +++ A
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEA 508

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++LFQ +   GL P+  T   MIHG 
Sbjct: 509 FDLFQQMRSDGLSPDRSTRRTMIHGL 534



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 69/115 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   L+ MI+ G  P+   +S LI+G C  G ID   ELF  M   GC+ ++VTY T
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           L++  C+   V+E+ +L+ +M S G+ P   T  T+ HGL E+++ E A ++ DE
Sbjct: 495 LVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 146/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M++RG  PN   Y+T+I+G C TG    A ++F  M+ NGC  NVVTY+T
Sbjct: 179 IKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYST 238

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + V +++   SEM+ +GI P V TYN++ HG   + Q+  A +LF EM   D
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   T T+   +DGLCK G + EA  +F T+     E  I  Y+ L+DG C    +  A 
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ + R G  P   +YNI+I+G+C   +MD+A  L  +M  K + P+ VT++TLM G 
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418

Query: 241 IRNNETSKVVELLHRM 256
            +     + + L   M
Sbjct: 419 CQLGRPKEALNLFKEM 434



 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 151/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M ++GV P+   Y+ L+DG+CL   ++ A+++F  M   GC     +YN 
Sbjct: 319 VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK++ ++E+ +L +EM  K + P  VTY+TL  GL ++ + + AL LF EM    
Sbjct: 379 LINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYG 438

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   +DG CK+G++ EA +L ++++  K E  I  Y+ LI+G+   GKLE A 
Sbjct: 439 PHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAK 498

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  L   G  P++ TY +MI G   +G  D+A+DLF  ME  G  PN  ++N ++ G 
Sbjct: 499 ELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558

Query: 241 IRNNETSKVVELLHRM 256
           ++N ++S  + L+  M
Sbjct: 559 LQNQDSSTAIRLIDEM 574



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 131/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M++   RP+   +   +  F    +      L   MD+    HNV + N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  C+   V+ S+++  +M   GI P  +T+N L +GL    +++ A++LF+EM    
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y T I+GLCK G    A ++F+ +    C+  +  YS +ID LCK   +  A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G+ PNV TYN ++HGFCN GQ+++A  LF +M  + V PN VTF  L+ G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 241 IRNNETSKVVELLHRMDER 259
            +    S+   +   M E+
Sbjct: 314 CKEGMVSEARLVFETMTEK 332



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 129/243 (53%), Gaps = 3/243 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V  N +  + LI+  C    +D +  +   M   G   + +T+N LING C    ++E++
Sbjct: 124 VTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAV 183

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L++EM+ +G  P V++Y T+ +GL +      A+ +F +M+ +       TY+T ID L
Sbjct: 184 ELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSL 243

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK+  + +A E    +        +  Y+ ++ G C +G+L  A  LF+ +    +MPN 
Sbjct: 244 CKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNT 303

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVEL 252
           VT+ I++ G C +G + +A  +F  M  KGV P+  T+N LM G C++   NE  KV E+
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363

Query: 253 LHR 255
           + R
Sbjct: 364 MIR 366



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 72/166 (43%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M   G  PN   Y  L+DGFC  G +D A +L  SM       N+V Y  LI
Sbjct: 426 EALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILI 485

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G      +E +  L+S++   G RP + TY  +  GL +    + A  LF +M+     
Sbjct: 486 EGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL 545

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
             + +YN  I G  +N     A  L   +   +  + +  +  L+D
Sbjct: 546 PNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 69/133 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +LL  M ++ + PN   Y+ LI+G  + G+++ A+ELF  +  +G   ++ TY  
Sbjct: 459 LDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTV 518

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G  K    +E+ +L+ +M   G  P   +YN +  G  +      A++L DEM    
Sbjct: 519 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 578

Query: 121 VAAETSTYNTFID 133
            +   ST+   +D
Sbjct: 579 FSVNLSTFQMLLD 591


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 149/250 (59%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M + G+ PN   YST+I GFC   ++D A +LF  M  NGCM N+VTYNTL++G C
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++E+  L  EM  +G++P   +Y+TL  GL +  +++ ALK+F++  + D   +  
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y+T I GLCK G + EA +LF  +R   CE  +  ++ L+DGLCK  +L+ A ++ +++
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
                 PNV+TY+ +I G C  GQ+  A ++F  M  +G+ PN VT+N+L+ G    N  
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 247 SKVVELLHRM 256
              + L+  M
Sbjct: 423 DSALLLMEEM 432



 Score =  186 bits (472), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 148/259 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L + M +    P+   ++ L+DG C    +  A+++  +M+   C  NV+TY++
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CKT  V ++  ++  M+ +GI P VVTYN+L HG    + V+ AL L +EM  + 
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYNT IDGLCK G   EA  LF  ++   C   +  YSCLI G CK+ +++ A 
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  + +  ++P+VVT++ ++ G+CN G +D A  L  +M A   +P+  T+ +L+ G 
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 556

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +   +L RM +R
Sbjct: 557 CKVGRMVEARRVLKRMAKR 575



 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 141/255 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +   MI RG+ PN   Y++LI GFC+T  +D A  L   M   GC+ +++TYNTLI
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 448

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CKT    E+  L+ +M +K   P V+TY+ L  G  ++ +++ A  LFD+M    V 
Sbjct: 449 DGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL 508

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T++T ++G C  G + +A  L   +    C   +  Y+ L+DG CK+G++  A  +
Sbjct: 509 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 568

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + G  PNVVTY  +I  FC  G+   A+ L  +M   GV PN +T+ +L+ G   
Sbjct: 569 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCG 628

Query: 243 NNETSKVVELLHRMD 257
             +  +  ++L R++
Sbjct: 629 TGDLEEARKILERLE 643



 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 139/239 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  LLD M +RG++P+ F Y TL+ G C TG+ID A ++F       C  +VV Y+T
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK   ++E+  L+ +M      P VVT+  L  GL +  +++ A ++ + M+  +
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ IDGLCK G + +A E+F+ + V   E  +  Y+ LI G C    +++A 
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +   G +P+++TYN +I G C  G+  +A+ LF DM+AK   P+ +T++ L+ G
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 137/259 (52%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L++ M   G  P+   Y+TLIDG C TG    A  LF  M    C  +V+TY+ 
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK + ++ +  L+ +ML + + P VVT++TL  G      V+ A +L +EM  SD
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TY + +DG CK G +VEA  + + +    C+  +  Y+ LID  C+ GK   A+
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 601

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLMLG 239
            L + +   G+ PNV+TY  +I GFC  G +++A  +   +E  +    +   +  +M G
Sbjct: 602 RLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDG 661

Query: 240 CIRNNETSKVVELLHRMDE 258
             R    S  +ELL  + +
Sbjct: 662 LCRTGRMSAALELLEAIKQ 680



 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 130/256 (50%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           ++ LD         N   ++ +IDG C    +  A   F  M   G + N  TYN LING
Sbjct: 111 AKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLING 170

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +CK   V  +  L  EM   G+ P VVTY+T+ HG     +V+ A KLF +M  +     
Sbjct: 171 FCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPN 230

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             TYNT + GLC+NG + EA EL   +R    +    +Y  L+ GLCK GK++ A ++F+
Sbjct: 231 LVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE 290

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
                   P+VV Y+ +I G C  G++D+A  LF  M      P+ VTF  LM G  + +
Sbjct: 291 DNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGD 350

Query: 245 ETSKVVELLHRMDERN 260
              +  ++L  M++RN
Sbjct: 351 RLQEAQQVLETMEDRN 366



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 135/258 (52%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LL+ M + G  P+A +Y+ +I   C      +A + F SM+   C  NV+T+  
Sbjct: 75  LDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTI 131

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   + E+   +++M  KG  P   TYN L +G  ++H+V  A  L  EM+ S 
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TY+T I G C+   +  A +LFR +    C   +  Y+ L+ GLC+ G ++ A+
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL P+  +Y+ ++ G C  G++D A  +F D       P+ V ++TL+ G 
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311

Query: 241 IRNNETSKVVELLHRMDE 258
            +     +  +L  +M E
Sbjct: 312 CKAGRLDEACKLFEKMRE 329



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 118/247 (47%), Gaps = 3/247 (1%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q+G   N + Y+ L +       ID    +  +    G   NV TY  +I G CK+ D++
Sbjct: 17  QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           ++  L  EM   G  P    YN + H L +      AL  F  M+         T+   I
Sbjct: 77  KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMI 133

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           DGLCK   + EA   F  ++          Y+ LI+G CK+ K+  A+ L + +   GL 
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           PNVVTY+ +IHGFC   ++D A+ LF  M   G  PN VT+NTL+ G  RN    +  EL
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253

Query: 253 LHRMDER 259
           L  M ER
Sbjct: 254 LDEMRER 260



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 2/239 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L D M+++ V P+   +STL++G+C  G +D A  L   M  + C  +V TY +
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   + E+  +   M  +G +P VVTY  L        +   A +L +EM  + 
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           V     TY + I G C  G + EA ++   L R   C+  + AY  ++DGLC+ G++  A
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA 671

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME-AKGVAPNCVTFNTLM 237
            EL +++ + G  P    Y  +I G C   ++ KA ++  +M  ++   PN   +  ++
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 730


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 147/252 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E   +  +M+++G++PN   Y +L+DG+CL  E+++A+ +  +M   G   ++ +YN 
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNI 342

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK K V+E++NL+ EM  K I P VVTYN+L  GL ++ ++ +ALKL DEM    
Sbjct: 343 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY++ +D LCKN  + +A  L   L+       +  Y+ LIDGLCK G+LE A 
Sbjct: 403 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 462

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ L   G    V TY +MIHGFCN G  D+A  L   M+     P+ VT+  ++   
Sbjct: 463 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522

Query: 241 IRNNETSKVVEL 252
              +E  K  +L
Sbjct: 523 FDKDENDKAEKL 534



 Score =  173 bits (439), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 147/251 (58%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++  G + +   Y TLI G C  GE   A +L   +D N    NVV Y+T+I+G CK 
Sbjct: 151 DNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKD 210

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V ++ +LYSEM+SKGI P VVTY+ L  G F + Q++ A+ LF++M   ++  +  T+
Sbjct: 211 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTF 270

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  +DG CK+G + E   +F  +     +  +  Y  L+DG C + ++  A  +  ++ +
Sbjct: 271 NILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQ 330

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P++ +YNI+I GFC   ++D+A +LF +M  K + P+ VT+N+L+ G  +  + S 
Sbjct: 331 RGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISY 390

Query: 249 VVELLHRMDER 259
            ++L+  M +R
Sbjct: 391 ALKLVDEMHDR 401



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 141/260 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + MI   ++P+ + ++ L+DGFC  G++   + +F  M   G   NVVTY +
Sbjct: 248 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 307

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC  K+V ++ ++   M  +G+ P + +YN L  G  +I +V+ A+ LF EM H  
Sbjct: 308 LMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH 367

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ IDGLCK G I  A +L   +        I  YS ++D LCK  +++ A 
Sbjct: 368 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 427

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   L   G+ PN+ TY I+I G C  G+++ AH++F D+  KG      T+  ++ G 
Sbjct: 428 ALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGF 487

Query: 241 IRNNETSKVVELLHRMDERN 260
                  + + LL +M + +
Sbjct: 488 CNKGLFDEALALLSKMKDNS 507



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 131/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+ +G+ PN   YS LI GF   G++  A +LF  M +     +V T+N 
Sbjct: 213 VNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNI 272

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   ++E   +++ M+ +GI+P VVTY +L  G   + +V  A  +   M    
Sbjct: 273 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRG 332

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +YN  IDG CK   + EA  LF+ +        +  Y+ LIDGLCK+GK+  A 
Sbjct: 333 VNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYAL 392

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G+ P+++TY+ ++   C + Q+DKA  L   ++ +G+ PN  T+  L+ G
Sbjct: 393 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 451



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 51/292 (17%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   YS++   F    ++  A  LF  +         + +N ++    K+K     L+L 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 79  SEMLSKGIRPTV------------------------------------------------ 90
            +M  +GI P +                                                
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 91  ---VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
              V Y TL HGL ++ +   AL L   +  + V      Y+T IDG+CK+ ++ +A +L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           +  +        +  YS LI G   +G+L+ A +LF  +    + P+V T+NI++ GFC 
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           DG+M +   +F  M  +G+ PN VT+ +LM G     E +K   +L+ M +R
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR 331



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 18/162 (11%)

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLC 171
           F+ + +S        Y++       N  +V+A  LF R LR       IE ++ ++  L 
Sbjct: 29  FNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIE-FNKILGSLV 87

Query: 172 KIGKLETAWELFQSL--------------PR--VGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           K     T   L Q +              P   +G  PN +T+  +I G C  GQ+ +A 
Sbjct: 88  KSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQAL 147

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
               ++ A G   + V + TL+ G  +  ET   ++LL R+D
Sbjct: 148 LFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVD 189


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 154/258 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL +  G+ P+A VYS L+DG+CL G++++A  +F +M   G   NVV Y TL+
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 576

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ EML +GI+P+ + Y+ +  GLF+  +   A   F EM  S +A
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 636

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GL KN    EA  LF+ LR +  ++ I   + +IDG+ +  ++E A +L
Sbjct: 637 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 696

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+ R  L+P+VVTY+IMI     +G +++A D+F  M+  G  PN    N ++   ++
Sbjct: 697 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 756

Query: 243 NNETSKVVELLHRMDERN 260
            NE  +    L ++DERN
Sbjct: 757 KNEIVRAGAYLSKIDERN 774



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M  +G  P+ F Y+ +++G+   G +    +LF  M  +G   +  T+N 
Sbjct: 340 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNV 399

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  Y     +++++ +++EM   G++P VVTY T+   L  I +++ A++ F++M    
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +   YN  I G C +G +++A EL   +      L I  +S +I+ LCK+G++  A 
Sbjct: 460 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F     VGL P+ V Y++++ G+C  G+M+KA  +F  M + G+ PN V + TL+ G 
Sbjct: 520 NIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 579

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + + L   M +R
Sbjct: 580 CKIGRIDEGLSLFREMLQR 598



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 139/256 (54%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M + G    PN   Y+T+IDGF   G++++A +LF  M   G   ++VTYN+
Sbjct: 200 QADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 259

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++     +M++K + P   TYN L +G     Q + A+++F EM+   
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T +  +  LCK G I EA ++F T+ +      + +Y+ +++G    G L    
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G+ P+  T+N++I  + N G +DKA  +F +M   GV P+ VT+ T++   
Sbjct: 380 DLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439

Query: 241 IRNNETSKVVELLHRM 256
            R  +    +E  ++M
Sbjct: 440 CRIGKMDDAMEKFNQM 455



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 38/265 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---------------------------- 42
           +++ G+R N  + + L++GFC     D A ++                            
Sbjct: 137 LLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 196

Query: 43  -------FVSMDING---CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                   + M   G   C  NVV YNT+I+G+ K  DV ++ +L+ EM+ +GI P +VT
Sbjct: 197 KSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 256

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           YN++ H L +   ++ A     +M +  V     TYN  I G    G   EA  +F+ +R
Sbjct: 257 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                  +   S L+  LCK GK++ A ++F ++   G  P+V +YNIM++G+   G + 
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLM 237
              DLF  M   G+AP+  TFN L+
Sbjct: 377 DMTDLFDLMLGDGIAPDFYTFNVLI 401



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 125/243 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M   GV+P+   Y T+I   C  G++D A E F  M   G   +   YN 
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    + ++  L SE+++ G+   +V ++++ + L ++ +V  A  +FD   +  
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+  +DG C  G + +A  +F  +     E  +  Y  L++G CKIG+++   
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G+ P+ + Y+I+I G    G+   A   F +M   G+A +  T+N ++ G 
Sbjct: 590 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGL 649

Query: 241 IRN 243
            +N
Sbjct: 650 FKN 652



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 120/253 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+QRG+ P+   Y++++   C    +D+A      M     + N  TYN 
Sbjct: 235 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 294

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY  T   +E++ ++ EM    I P VVT + L   L +  +++ A  +FD M    
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YN  ++G    G +V+  +LF  +           ++ LI      G L+ A 
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 414

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G+ P+VVTY  +I   C  G+MD A + F  M  +GVAP+   +N L+ G 
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 474

Query: 241 IRNNETSKVVELL 253
             +    K  EL+
Sbjct: 475 CTHGSLLKAKELI 487



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 85/157 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+QRG++P+  +YS +IDG    G    A+  F  M  +G   ++ TYN 
Sbjct: 585 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNI 644

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S 
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 704

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +     TY+  I  L K G + EA ++F +++   CE
Sbjct: 705 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 22/166 (13%)

Query: 109 ALKLFDEM----QHSDVAAETS-TYNTFIDGLCKNGYIVEAA-----ELFRT-LRVLKCE 157
           A+ LF+      Q   V + TS TY   +D  C   +  E A     +L RT LRV    
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMD-CCTRAHRPELALAFFGQLLRTGLRV---- 144

Query: 158 LGIEAYSCLIDGLCKIGKLETAWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
             I   + L++G C+  + + A + L    P +G +P+V +Y+I++   C+ G+  +A D
Sbjct: 145 -NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 217 LFLDMEAKGVA---PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L L M A+G A   PN V +NT++ G  +  + +K  +L   M +R
Sbjct: 204 L-LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 248



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGL--------CKNGYIV------EAAELFRTLR 152
           E A  L DE+Q           N F+  L        C++G  +       AA   +  R
Sbjct: 46  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 105

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           VL        Y+ L+D   +  + E A   F  L R GL  N++  N ++ GFC   + D
Sbjct: 106 VLSPT--SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTD 163

Query: 213 KAHDLFLDMEAK-GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +A D+ L    + G  P+  +++ L+       ++ +  +LL  M E
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 210


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  190 bits (483), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 150/259 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M + GV P+   YS+L+ G+ L  EI  AR+LF +M   GC  +  +YN 
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK K ++E+  L++EM+ +G+ P  V YNTL HGL ++ ++  A  LF  M  + 
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY+  +DG CK GY+ +A  LFR ++    +  I  Y+ LID +CK G L+ A 
Sbjct: 441 NLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDAR 500

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  L   GL+PNV  Y  +I+  C +G +D+A + F +ME  G  P+  ++N ++ G 
Sbjct: 501 KLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGF 560

Query: 241 IRNNETSKVVELLHRMDER 259
           ++  + S+  +L+  M +R
Sbjct: 561 LQYKDESRAAQLIGEMRDR 579



 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 137/254 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    D     G +P  + Y+T+I+G C  GE   A  LF  M+  GC  NVVTYN LI
Sbjct: 183 QAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILI 242

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K V E+L+++S M +K I P + TYN+L  GL    + + A  L +EM   ++ 
Sbjct: 243 DSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIM 302

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +D +CK G + EA  +F+T+  +  E  +  YS L+ G     ++  A +L
Sbjct: 303 PNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKL 362

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G  P+  +YNI+I G+C   ++D+A  LF +M  +G+ P+ V +NTL+ G  +
Sbjct: 363 FDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQ 422

Query: 243 NNETSKVVELLHRM 256
                +  +L   M
Sbjct: 423 LGRLREAQDLFKNM 436



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   MI+ G++P+A  ++TLI+G C  G+  +A E F   + +GC   V TY T
Sbjct: 146 VDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTT 205

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +   +  L+ +M   G +P VVTYN L   L +   V  AL +F  M+   
Sbjct: 206 IINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKR 265

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TYN+ I GLC      EA+ L   +  L     I  ++ L+D +CK GK+  A 
Sbjct: 266 ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQ 325

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+++  +G+ P+VVTY+ +++G+    ++ +A  LF  M  KG  P+  ++N L+ G 
Sbjct: 326 GVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGY 385

Query: 241 IRNNETSKVVELLHRM 256
            +     +  +L + M
Sbjct: 386 CKAKRIDEAKQLFNEM 401



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 122/225 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P+ +  S LID F     +D A  +F  M   G   + VT+NTLING CK     ++
Sbjct: 125 GLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           +  + +  + G +PTV TY T+ +GL +I +   A  LF +M+ +       TYN  ID 
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDS 244

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + EA ++F  ++  +    I  Y+ LI GLC   + + A  L   +  + +MPN
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + T+N+++   C +G++ +A  +F  M   GV P+ VT+++LM G
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYG 349



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 122/223 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D MI +G +P+AF Y+ LI G+C    ID A++LF  M   G   + V YNTLI
Sbjct: 358 EARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLI 417

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+ +L+  M S G  P + TY+ L  G  +   +  A +LF  MQ + + 
Sbjct: 418 HGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLK 477

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + + YN  ID +CK G + +A +LF  L V      ++ Y+ +I+ LCK G L+ A E 
Sbjct: 478 PDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEA 537

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           F+++   G  P+  +YN++I GF       +A  L  +M  +G
Sbjct: 538 FRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 131/259 (50%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR-ELFVSMDINGCMHNVVTYN 59
           +D+A    + M+ R   P    ++ L+      G+   A   L   M++ G   ++ T +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+ +   + V+ + +++S+M+  G++P  VT+NTL +GL ++ +   A++ FD+ + S
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TY T I+GLCK G    AA LF+ +    C+  +  Y+ LID LCK   +  A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++F  +    + P++ TYN +I G CN  +  +A  L  +M +  + PN  TFN L+  
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  + S+   +   M E
Sbjct: 315 ICKEGKVSEAQGVFKTMTE 333



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 99/186 (53%)

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L  +M   G+ P + T + L      + +V+ A  +F +M    +  +  T+NT I+G
Sbjct: 115 ISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLING 174

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G   +A E F       C+  +  Y+ +I+GLCKIG+   A  LF+ +   G  PN
Sbjct: 175 LCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPN 234

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTYNI+I   C D  +++A D+F  M+AK ++P+  T+N+L+ G        +   LL+
Sbjct: 235 VVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLN 294

Query: 255 RMDERN 260
            M   N
Sbjct: 295 EMTSLN 300



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 62/127 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL  +M    ++P+  +Y+ LID  C  G +  AR+LF  + + G + NV  Y T
Sbjct: 461 LGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTT 520

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK   ++E+L  +  M   G  P   +YN +  G  +      A +L  EM+   
Sbjct: 521 IINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580

Query: 121 VAAETST 127
             AE  T
Sbjct: 581 FVAEAGT 587


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  190 bits (483), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 99/268 (36%), Positives = 146/268 (54%), Gaps = 11/268 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+ RG+ PN   Y+++IDGFC    +D A  +F  M   GC  +V T+NTLI
Sbjct: 337 EAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLI 396

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K +++   L  EM   G+     TYNTL HG   +  +  AL L  +M  S V 
Sbjct: 397 DGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 456

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-----------IEAYSCLIDGLC 171
            +  T NT +DGLC NG + +A E+F+ ++  K +L            ++ Y+ LI GL 
Sbjct: 457 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLI 516

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++PN +TY+ MI+G C   ++D+A  +F  M +K  +P+ V
Sbjct: 517 NEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVV 576

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
           TFNTL+ G  +       +EL   M  R
Sbjct: 577 TFNTLVSGYCKAGRVDDGLELFCEMGRR 604



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 144/267 (53%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  +M  +G  P+ F ++TLIDG+C    ID   EL   M   G + +  TYNT
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C   D+  +L+L  +M+S G+ P +VT NTL  GL +  +++ AL++F  MQ S 
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489

Query: 121 -----------VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
                      V  +  TYN  I GL   G  +EA EL++ +           YS +I+G
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      P+VVT+N ++ G+C  G++D   +LF +M  +G+  +
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVAD 609

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+ TL+ G  +    +  +++   M
Sbjct: 610 AITYITLIHGFRKVGNINGALDIFQEM 636



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 148/269 (55%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RLL  M++R + PN   YS LI+ +    +   A EL+  M   G + N +TYN++I
Sbjct: 302 EAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMI 361

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK   ++ + +++  M +KG  P V T+NTL  G     +++   +L  EM  + + 
Sbjct: 362 DGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLV 421

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+T+TYNT I G C  G +  A +L + +        I   + L+DGLC  GKL+ A E+
Sbjct: 422 ADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 481

Query: 183 FQSL-----------PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           F+++           P  G+ P+V TYNI+I G  N+G+  +A +L+ +M  +G+ PN +
Sbjct: 482 FKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTI 541

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           T+++++ G  + +   +  ++   M  ++
Sbjct: 542 TYSSMINGLCKQSRLDEATQMFDSMGSKS 570



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 124/243 (51%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++PN  +YS +IDG    G    A  L+  M   G   ++ TYN +I+G+C +    E+ 
Sbjct: 245 IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQ 304

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EML + I P VVTY+ L +   +  +   A +L+DEM    +   T TYN+ IDG 
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK   +  A  +F  +    C   +  ++ LIDG C   +++   EL   +   GL+ + 
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADT 424

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
            TYN +IHGFC  G ++ A DL   M + GV P+ VT NTL+ G   N +    +E+   
Sbjct: 425 TTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 484

Query: 256 MDE 258
           M +
Sbjct: 485 MQK 487



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 130/281 (46%), Gaps = 42/281 (14%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G +P+   +STL+ G C+   +  A +LF  M    C  NVVT+ TL+NG C+   V E+
Sbjct: 142 GFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEA 197

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL------------------------ 110
           + L   M+  G++P  +TY T+  G+ +I     AL                        
Sbjct: 198 VALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIID 257

Query: 111 ------------KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
                        L+ EMQ   +  +  TYN  IDG C +G   EA  L + +   K   
Sbjct: 258 GLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINP 317

Query: 159 GIEAYSCLIDGLCKIGKLETAWELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
            +  YS LI+   K  K   A EL+ + LPR G++PN +TYN MI GFC   ++D A  +
Sbjct: 318 NVVTYSALINAYVKERKFFEAEELYDEMLPR-GIIPNTITYNSMIDGFCKQNRLDAAEHM 376

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           F  M  KG +P+  TFNTL+ G           ELLH M E
Sbjct: 377 FYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417



 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   ++ L+         D    L+  M+      +V ++N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G +P VVT++TL HGL    +V  AL LF +M   +
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPN 177

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T+ T ++GLC+ G +VEA  L   +     +     Y  ++DG+CKIG   +A 
Sbjct: 178 VV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  +  + PNVV Y+ +I G   DG+   AH+L+ +M+ KG+ P+  T+N ++ G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S+   LL  M ER 
Sbjct: 294 FCSSGRWSEAQRLLQEMLERK 314



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 25/240 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD-----------IN 49
           ++ A  L   MI  GV P+    +TL+DG C  G++  A E+F +M             N
Sbjct: 440 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFN 499

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   +V TYN LI+G        E+  LY EM  +GI P  +TY+++ +GL +  +++ A
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA------- 162
            ++FD M     + +  T+NT + G CK G + +  ELF       CE+G          
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELF-------CEMGRRGIVADAIT 612

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y  LI G  K+G +  A ++FQ +   G+ P+ +T   M+    +  ++ +A  +  D++
Sbjct: 613 YITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 80/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M  RG+ PN   YS++I+G C    +D A ++F SM       +VVT+NTL+
Sbjct: 523 EAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   V++ L L+ EM  +GI    +TY TL HG  ++  +  AL +F EM  S V 
Sbjct: 583 SGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVY 642

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T  + +  L     +  A  +   L++
Sbjct: 643 PDTITIRSMLTVLWSKEELKRAVAMLEDLQM 673



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 104/198 (52%), Gaps = 4/198 (2%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G+ + K +E++++L+S+M+     P+V+ +N L   +  + + +  + L+ +M+   
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++N  I   C    +  A   F  +  L  +  +  +S L+ GLC   ++  A 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + R    PNVVT+  +++G C +G++ +A  L   M   G+ PN +T+ T++ G 
Sbjct: 168 DLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 224 CKIGDTVSALNLLRKMEE 241



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 71/119 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   P+   ++TL+ G+C  G +D   ELF  M   G + + +TY T
Sbjct: 556 LDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYIT 615

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G+ K  ++  +L+++ EM+S G+ P  +T  ++   L+   +++ A+ + +++Q S
Sbjct: 616 LIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMS 674


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  190 bits (482), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 138/227 (60%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L ++MIQ  V P+ F Y +LI+G C+ G +D AR++F  M+ NGC  N V Y TLI
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK+K VE+ + ++ EM  KG+    +TY  L  G   + + + A ++F++M      
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  +DGLC NG + +A  +F  +R  + ++ I  Y+ +I G+CK+GK+E A++L
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           F SL   G+ PNV+TY  MI GFC  G + +A  LF  M+  G  PN
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 135/256 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+ LL  M++R + PN   ++ LID F   G++  A+EL+  M       +V TY +LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C    ++E+  ++  M   G  P  V Y TL HG  +  +VE  +K+F EM    V 
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T TY   I G C  G    A E+F  +   +    I  Y+ L+DGLC  GK+E A  +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ + +  +  N+VTY I+I G C  G+++ A DLF  + +KG+ PN +T+ T++ G  R
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480

Query: 243 NNETSKVVELLHRMDE 258
                +   L  +M E
Sbjct: 481 RGLIHEADSLFKKMKE 496



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 130/257 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            AS  L  M++ G  P+   +++L++G+C    I+ A  LF  +   G   NVVTY TLI
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK + +  ++ L+++M + G RP VVTYN L  GL EI +   A  L  +M    + 
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+   ID   K G ++EA EL+  +  +     +  Y  LI+GLC  G L+ A ++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + R G  PN V Y  +IHGFC   +++    +F +M  KGV  N +T+  L+ G   
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375

Query: 243 NNETSKVVELLHRMDER 259
                   E+ ++M  R
Sbjct: 376 VGRPDVAQEVFNQMSSR 392



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L D ++  G +PN   Y+TLI   C    ++ A ELF  M  NG   NVVTYN 
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+     ++  L  +M+ + I P V+T+  L     ++ ++  A +L++ M    
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY + I+GLC  G + EA ++F  +    C      Y+ LI G CK  ++E   
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  + + G++ N +TY ++I G+C  G+ D A ++F  M ++   P+  T+N L+ G 
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 241 IRNNETSKVVELLHRMDER 259
             N +  K + +   M +R
Sbjct: 409 CCNGKVEKALMIFEYMRKR 427



 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 135/258 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D    L + M   G+ P     + ++   CL+ +  RA      M   G   ++VT+ +L
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NGYC    +E+++ L+ ++L  G +P VVTY TL   L +   + HA++LF++M  +  
Sbjct: 160 LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  + GLC+ G   +AA L R +   + E  +  ++ LID   K+GKL  A E
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE 279

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L+  + ++ + P+V TY  +I+G C  G +D+A  +F  ME  G  PN V + TL+ G  
Sbjct: 280 LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC 339

Query: 242 RNNETSKVVELLHRMDER 259
           ++      +++ + M ++
Sbjct: 340 KSKRVEDGMKIFYEMSQK 357



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 105/199 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++  LM + G  PN  +Y+TLI GFC +  ++   ++F  M   G + N +TY  
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC     + +  ++++M S+   P + TYN L  GL    +VE AL +F+ M+  +
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I G+CK G + +A +LF +L     +  +  Y+ +I G C+ G +  A 
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488

Query: 181 ELFQSLPRVGLMPNVVTYN 199
            LF+ +   G +PN   Y 
Sbjct: 489 SLFKKMKEDGFLPNESVYK 507



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 89/187 (47%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           ++L+L++ M+     P+++ +  L   + ++++ +  + LF++MQ   +     T N  +
Sbjct: 66  DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
             +C +     A+     +  L  E  +  ++ L++G C   ++E A  LF  +  +G  
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           PNVVTY  +I   C +  ++ A +LF  M   G  PN VT+N L+ G            L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245

Query: 253 LHRMDER 259
           L  M +R
Sbjct: 246 LRDMMKR 252


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  190 bits (482), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 137/227 (60%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L  +MIQ  V P+ F Y+ LI+G C  G +D AR++F  M+ NG   N VTY TLI
Sbjct: 275 EAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLI 334

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK+K VE+   ++ EM  KG+    +TY  L  G   + + + A ++F++M      
Sbjct: 335 HGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAP 394

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  +DGLC NGY+ +A  +F+ +R  + ++ I  Y+ +I G+CK+GK+E A++L
Sbjct: 395 PDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDL 454

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           F SL   G+ PNV+TY  MI GFC  G + +A  LF  M+  G  PN
Sbjct: 455 FCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 136/257 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A+ LL  M++RG++PN   ++ LID F   G+I  A+EL+  M       +V TY  L
Sbjct: 239 SDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING C    ++E+  ++  M S G  P  VTY TL HG  +  +VE   K+F EM    +
Sbjct: 299 INGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A T TY   I G C  G    A E+F  +   +    I  Y+ L+DGLC  G +E A  
Sbjct: 359 VANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALM 418

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + +  +  N+VTY I+I G C  G+++ A DLF  + +KG+ PN +T+ T++ G  
Sbjct: 419 IFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 478

Query: 242 RNNETSKVVELLHRMDE 258
           R     +   L  +M E
Sbjct: 479 RRGFIHEADALFKKMKE 495



 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 134/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            AS  L  M++ G  P+   +++L+ GFC    I+ A  LF  +   G   NVVTY TLI
Sbjct: 135 RASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLI 194

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + +  ++ ++++M   GIRP VVTYN+L  GL EI +   A  L  +M    + 
Sbjct: 195 HCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQ 254

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+   ID   K G I+EA EL++ +  +     +  Y+ LI+GLC  G+L+ A ++
Sbjct: 255 PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQM 314

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G  PN VTY  +IHGFC   +++    +F +M  KG+  N +T+  L+ G   
Sbjct: 315 FYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCL 374

Query: 243 NNETSKVVELLHRMDER 259
                   E+ ++M  R
Sbjct: 375 VGRPDVAQEVFNQMGSR 391



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L D ++  G RPN   Y+TLI   C    ++ A E+F  M  NG   NVVTYN+
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C+     ++  L  +M+ +GI+P V+T+  L     ++ ++  A +L+  M    
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   I+GLC  G + EA ++F  +           Y+ LI G CK  ++E   
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  + + GL+ N +TY ++I G+C  G+ D A ++F  M ++   P+  T+N L+ G 
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407

Query: 241 IRNNETSKVVELLHRMDER 259
             N    K + +   M +R
Sbjct: 408 CYNGYVEKALMIFKYMRKR 426



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 141/258 (54%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D    L + M   G+ P  +  + +++  C + +  RA      M   G   ++VT+ +L
Sbjct: 99  DVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSL 158

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G+C    +E++L L+ +++  G RP VVTY TL H L +   + HA+++F++M  + +
Sbjct: 159 LHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGI 218

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN+ + GLC+ G   +AA L R +     +  +  ++ LID   K+GK+  A E
Sbjct: 219 RPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKE 278

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L++ + ++ + P+V TY  +I+G C  G++D+A  +F  ME+ G  PN VT+ TL+ G  
Sbjct: 279 LYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFC 338

Query: 242 RNNETSKVVELLHRMDER 259
           ++       ++ + M ++
Sbjct: 339 KSKRVEDGTKIFYEMSQK 356



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 100/194 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++  LM   G  PN   Y+TLI GFC +  ++   ++F  M   G + N +TY  
Sbjct: 308 LDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTV 367

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC     + +  ++++M S+   P + TYN L  GL     VE AL +F  M+  +
Sbjct: 368 LIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKRE 427

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I G+CK G + +A +LF +L     +  +  Y+ +I G C+ G +  A 
Sbjct: 428 MDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEAD 487

Query: 181 ELFQSLPRVGLMPN 194
            LF+ +   G +PN
Sbjct: 488 ALFKKMKEDGFLPN 501



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 94/187 (50%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E+L+L++ M+     P++V +  L   + ++ + +  + LF++MQ   ++    T N  +
Sbjct: 65  EALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVM 124

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           + +C++     A+     +  L  E  +  ++ L+ G C   ++E A  LF  +  +G  
Sbjct: 125 NCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFR 184

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           PNVVTY  +IH  C +  ++ A ++F  M   G+ PN VT+N+L+ G       S    L
Sbjct: 185 PNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWL 244

Query: 253 LHRMDER 259
           L  M +R
Sbjct: 245 LRDMMKR 251



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 102/222 (45%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           + + A +LF  M  +  + ++V +  L++   K K  +  ++L+ +M   GI P + T N
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + + +    Q   A     +M       +  T+ + + G C    I +A  LF  +  +
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                +  Y+ LI  LCK   L  A E+F  +   G+ PNVVTYN ++ G C  G+   A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             L  DM  +G+ PN +TF  L+   ++  +  +  EL   M
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVM 283


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  189 bits (481), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 154/259 (59%), Gaps = 6/259 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M++  V+P+   YSTL+DG+ L  E+ +A+ +F +M + G   +V +Y  
Sbjct: 285 VKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTI 344

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K V+E+LNL+ EM  K + P +VTY++L  GL +  ++ +   L DEM+   
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR---VLKCELGIEAYSCLIDGLCKIGKLE 177
           + A   TYN+ IDGLCKNG++  A  LF  ++   +  C      ++ L+DGLCK G+L+
Sbjct: 405 IPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF---TFTILLDGLCKGGRLK 461

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E FQ L   G   +V  YN+MI+G C  G +++A  +   ME  G  PN VTF+ ++
Sbjct: 462 DAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIII 521

Query: 238 LGCIRNNETSKVVELLHRM 256
               + +E  K  +LL +M
Sbjct: 522 NALFKKDENDKAEKLLRQM 540



 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 131/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M  +G+  +   Y+TLI GFC+  ++  A  L   M +     NV TYN 
Sbjct: 215 VSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   V+E+ N+ + ML   ++P V+TY+TL  G F +++++ A  +F+ M    
Sbjct: 275 LVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +Y   I+G CKN  + EA  LF+ +       GI  YS LIDGLCK G++   W
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G+  NV+TYN +I G C +G +D+A  LF  M+ +G+ P   TF  L+ G
Sbjct: 395 DLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDG 453



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    D ++ +G++ +   Y TLI+G C  G+   A +L   +D      NV  YNT
Sbjct: 145 VNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + V E+  L+SEM +KGI   VVTY TL +G     +++ A+ L +EM    
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  +D LCK G + EA  +   +     +  +  YS L+DG   + +L+ A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQ 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++  +G+ P+V +Y I+I+GFC +  +D+A +LF +M  K + P  VT+++L+ G 
Sbjct: 325 HVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   S V +L+  M +R
Sbjct: 385 CKSGRISYVWDLIDEMRDR 403



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 140/259 (54%), Gaps = 2/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           + EA  LL+ M+ + + PN + Y+ L+D  C  G++  A+ +   M +  C+  +V+TY+
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM-LKACVKPDVITYS 308

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL++GY    +++++ ++++ M   G+ P V +Y  L +G  +   V+ AL LF EM   
Sbjct: 309 TLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++     TY++ IDGLCK+G I    +L   +R       +  Y+ LIDGLCK G L+ A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRA 428

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF  +   G+ P   T+ I++ G C  G++  A + F D+  KG   +   +N ++ G
Sbjct: 429 IALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMING 488

Query: 240 CIRNNETSKVVELLHRMDE 258
             +     + + +L +M+E
Sbjct: 489 HCKQGLLEEALTMLSKMEE 507



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 121/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M   GV P+   Y+ LI+GFC    +D A  LF  M     +  +VTY++
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+  +    +L  EM  +GI   V+TYN+L  GL +   ++ A+ LF++M+   
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   + T+   +DGLCK G + +A E F+ L      L +  Y+ +I+G CK G LE A 
Sbjct: 440 IRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEAL 499

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            +   +   G +PN VT++I+I+      + DKA  L   M  +G+
Sbjct: 500 TMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 120/243 (49%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G++P+    + LI+ FC  G+I     +   +   G   + +T+ TLI G C    V +
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNK 147

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ + ++L++GI+   V+Y TL +G+ +I     A+KL  ++           YNT ID
Sbjct: 148 ALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID 207

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK   + EA  LF  +        +  Y+ LI G C   KL+ A  L   +    + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINP 267

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV TYNI++   C +G++ +A ++   M    V P+ +T++TLM G     E  K   + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVF 327

Query: 254 HRM 256
           + M
Sbjct: 328 NAM 330



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 118/237 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P    ++ ++D F        A  L   +++ G   +++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    +    ++ +++L +G +P  +T+ TL  GL    QV  AL   D++    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y T I+G+CK G    A +L R +     +  +E Y+ +ID LCK   +  A+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF  +   G+  +VVTY  +I+GFC   ++ +A  L  +M  K + PN  T+N L+
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILV 276



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 3/209 (1%)

Query: 51  CMHN---VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE 107
           CM +   ++ +N +++ + K K    +++L   +  KGI+P ++T N L +    + Q+ 
Sbjct: 52  CMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQIT 111

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
               +  ++        T T+ T I GLC  G + +A      L     +    +Y  LI
Sbjct: 112 FGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLI 171

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           +G+CKIG    A +L + +      PNV  YN +I   C    + +A+ LF +M AKG++
Sbjct: 172 NGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS 231

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            + VT+ TL+ G    ++  + + LL+ M
Sbjct: 232 ADVVTYTTLIYGFCIASKLKEAIGLLNEM 260



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 73/158 (46%)

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
            I  V+ A+  F+ M           +N  +D   K  +   A  L   L +   +  + 
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLI 95

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             + LI+  C +G++   + +   + + G  P+ +T+  +I G C  GQ++KA      +
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            A+G+  + V++ TL+ G  +  +T   ++L+ ++D R
Sbjct: 156 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGR 193


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/258 (37%), Positives = 150/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL +  G+ P A VYS L+DG+CL G++++A  +F +M   G   N V Y TL+
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ EML KGI+P+ + YN +  GLFE  +   A   F EM  S +A
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  + GL KN    EA  LF+ LR +  ++ I   + +I G+ +  ++E A +L
Sbjct: 637 MNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDL 696

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+ R GL+P VVTY+IMI     +G +++A D+F  M+  G  P+    N ++   ++
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756

Query: 243 NNETSKVVELLHRMDERN 260
            NE  +    L ++DERN
Sbjct: 757 KNEIVRAGAYLSKIDERN 774



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M  +G  PN F Y+ +++G+   G +    +LF  M  +G   ++ T+N 
Sbjct: 340 IKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNV 399

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  Y     +++++ +++EM   G++P VVTY T+   L  I +++ A++ F++M    
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +   Y+  I G C +G +++A EL   +      L I  +S +I+ LCK+G++  A 
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F     VGL P  V Y++++ G+C  G+M+KA  +F  M + G+ PN V + TL+ G 
Sbjct: 520 NIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + + L   M ++
Sbjct: 580 CKIGRIDEGLSLFREMLQK 598



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 140/256 (54%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M + G    P+   YST+IDGF   G++++A +LF  M   G   + VTY++
Sbjct: 200 QADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSS 259

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++     +M++KG+ P   TYN L +G     Q + A+++F EM+   
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T +  +  LCK G I EA ++F T+ +      + +Y+ +++G    G L    
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMT 379

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G+ P++ T+N++I  + N G +DKA  +F +M   GV P+ VT+ T++   
Sbjct: 380 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439

Query: 241 IRNNETSKVVELLHRM 256
            R  +    +E  ++M
Sbjct: 440 CRIGKMDDAMEKFNQM 455



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 120/253 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+QRG+ P+   YS+++   C    +D+A      M   G + N  TYN 
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY  T   +E++ ++ EM    I P VVT + L   L +  +++ A  +FD M    
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y   ++G    G +V+  +LF  +        I  ++ LI      G L+ A 
Sbjct: 355 QNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 414

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G+ P+VVTY  +I   C  G+MD A + F  M  +GVAP+   ++ L+ G 
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474

Query: 241 IRNNETSKVVELL 253
             +    K  EL+
Sbjct: 475 CTHGSLLKAKELI 487



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 128/260 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M   GV+P+   Y T+I   C  G++D A E F  M   G   +   Y+ 
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    + ++  L SE+++ G+   +V ++++ + L ++ +V  A  +FD   +  
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y+  +DG C  G + +A  +F  +     E     Y  L++G CKIG+++   
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G+ P+ + YNI+I G    G+   A   F +M   G+A N  T+N ++ G 
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGL 649

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N    + + L   +   N
Sbjct: 650 FKNRCFDEAIFLFKELRAMN 669



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 38/265 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---------------------------- 42
           +++ G+R N  + + L+ GFC     D A ++                            
Sbjct: 137 LLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 196

Query: 43  -------FVSMDING---CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                   + M   G   C  +VV Y+T+I+G+ K  DV ++ +L+ EM+ +GI P  VT
Sbjct: 197 KSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVT 256

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           Y+++ H L +   ++ A     +M +  V     TYN  I G    G   EA  +F+ +R
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                  +   S L+  LCK GK++ A ++F ++   G  PNV +Y IM++G+   G + 
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLM 237
              DLF  M   G+AP+  TFN L+
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLI 401



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 84/157 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+Q+G++P+  +Y+ +IDG    G    A+  F  M  +G   N  TYN 
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNI 644

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S 
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSG 704

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +     TY+  I  L K G + EA ++F +++   CE
Sbjct: 705 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 3/227 (1%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           R + P +  Y+ L+D        + A   F  +   G   N++  N L+ G+C+ K  +E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDE 164

Query: 74  SLN-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV--AAETSTYNT 130
           +L+ L       G  P V +Y+ L   L +  +   A  L   M       + +   Y+T
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYST 224

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG  K G + +A +LF+ +           YS ++  LCK   ++ A    + +   G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++PN  TYN +I+G+ + GQ  +A  +F +M    + P+ VT + LM
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 22/166 (13%)

Query: 109 ALKLFDEM----QHSDVAAETS-TYNTFIDGLCKNGYIVEAA-----ELFRT-LRVLKCE 157
           A+ LF+      Q   V + TS TY   +D  C   +  E A     +L RT LRV    
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMD-CCTRAHRPELALAFFGQLLRTGLRV---- 144

Query: 158 LGIEAYSCLIDGLCKIGKLETAWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
             I   + L+ G C+  + + A + L    P +G +P+V +Y+I++   C+ G+  +A D
Sbjct: 145 -NIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 217 LFLDMEAKGVA---PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L L M A+G A   P+ V ++T++ G  +  + +K  +L   M +R
Sbjct: 204 L-LRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQR 248



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGL--------CKNGYIV------EAAELFRTLR 152
           E A  L DE+Q           N F+  L        C++G  +       AA   +  R
Sbjct: 46  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 105

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           VL        Y+ L+D   +  + E A   F  L R GL  N++  N ++ GFC   + D
Sbjct: 106 VLSPT--SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTD 163

Query: 213 KAHDLFLDMEAK-GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +A D+ L    + G  P+  +++ L+       ++ +  +LL  M E
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 210


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 145/254 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +LL  M+QRG+ PN   Y++LIDGFC    ++ A ++   M   GC  +++T+N LI
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +++ L L+ EM  +G+    VTYNTL  G  +  ++E A KLF EM    V 
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y   +DGLC NG + +A E+F  +   K EL I  Y  +I G+C   K++ AW+L
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SLP  G+  +   YNIMI   C    + KA  LF  M  +G AP+ +T+N L+   + 
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590

Query: 243 NNETSKVVELLHRM 256
           +++ +   EL+  M
Sbjct: 591 DDDATTAAELIEEM 604



 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 146/257 (56%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+ ++LL  MI+R + PN   +S LID F   G++  A +L   M   G   N +TYN+L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   +EE++ +   M+SKG  P ++T+N L +G  + ++++  L+LF EM    V
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A T TYNT + G C++G +  A +LF+ +   +    I +Y  L+DGLC  G+LE A E
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + +  +  ++  Y I+IHG CN  ++D A DLF  +  KGV  +   +N ++    
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554

Query: 242 RNNETSKVVELLHRMDE 258
           R +  SK   L  +M E
Sbjct: 555 RKDSLSKADILFRKMTE 571



 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 142/255 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M +R ++ +A  YS +IDG C  G +D A  LF  M+I G   +++TYNTLI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C     ++   L  +M+ + I P VVT++ L     +  ++  A +L  EM    +A 
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            T TYN+ IDG CK   + EA ++   +    C+  I  ++ LI+G CK  +++   ELF
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G++ N VTYN ++ GFC  G+++ A  LF +M ++ V P+ V++  L+ G   N
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486

Query: 244 NETSKVVELLHRMDE 258
            E  K +E+  ++++
Sbjct: 487 GELEKALEIFGKIEK 501



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 133/237 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +++DLMI +G  P+   ++ LI+G+C    ID   ELF  M + G + N VTYNT
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++  +E +  L+ EM+S+ +RP +V+Y  L  GL +  ++E AL++F +++ S 
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   I G+C    + +A +LF +L +   +L   AY+ +I  LC+   L  A 
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ +   G  P+ +TYNI+I     D     A +L  +M++ G   +  T   ++
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 134/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M++ G +P     +TL++G CL G++  A  L   M   G   N VTY  ++
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  CK+     ++ L  +M  + I+   V Y+ +  GL +   +++A  LF+EM+     
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+  TYNT I G C  G   + A+L R +   K    +  +S LID   K GKL  A +L
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + G+ PN +TYN +I GFC + ++++A  +   M +KG  P+ +TFN L+ G  +
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415

Query: 243 NNETSKVVELLHRMDER 259
            N     +EL   M  R
Sbjct: 416 ANRIDDGLELFREMSLR 432



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 134/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+D M++ G +PN   Y  +++  C +G+   A EL   M+      + V Y+ +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   ++ + NL++EM  KG +  ++TYNTL  G     + +   KL  +M    ++
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  ID   K G + EA +L + +           Y+ LIDG CK  +LE A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P+++T+NI+I+G+C   ++D   +LF +M  +GV  N VT+NTL+ G  +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450

Query: 243 NNETSKVVELLHRMDER 259
           + +     +L   M  R
Sbjct: 451 SGKLEVAKKLFQEMVSR 467



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 135/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G  P+  +++TL++G CL   +  A EL   M   G    ++T NTL+NG C    
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V +++ L   M+  G +P  VTY  + + + +  Q   A++L  +M+  ++  +   Y+ 
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGLCK+G +  A  LF  + +   +  I  Y+ LI G C  G+ +   +L + + +  
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PNVVT++++I  F  +G++ +A  L  +M  +G+APN +T+N+L+ G  + N   + +
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388

Query: 251 ELLHRM 256
           +++  M
Sbjct: 389 QMVDLM 394



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 128/249 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  +G+  + +  S +I+ FC   ++  A      +   G   + V +NTL+NG C    
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L L   M+  G +PT++T NTL +GL    +V  A+ L D M  +       TY  
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++ +CK+G    A EL R +     +L    YS +IDGLCK G L+ A+ LF  +   G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
              +++TYN +I GFCN G+ D    L  DM  + ++PN VTF+ L+   ++  +  +  
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 251 ELLHRMDER 259
           +LL  M +R
Sbjct: 354 QLLKEMMQR 362



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 1/208 (0%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            N+   + L +G    K  +++++L+ +M+     PTV+ +N LF  + +  Q E  L L
Sbjct: 52  RNLSYRDKLSSGLVGIK-ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLAL 110

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
             +M+   +A    T +  I+  C+   +  A      +  L  E     ++ L++GLC 
Sbjct: 111 CKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCL 170

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
             ++  A EL   +  +G  P ++T N +++G C +G++  A  L   M   G  PN VT
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDERN 260
           +  ++    ++ +T+  +ELL +M+ERN
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERN 258


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 148/257 (57%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L+ M  RGV P+AF YS LI G C   +I+ A ++   M  +GC  +VV Y+++I
Sbjct: 302 EAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 361

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DV 121
           + +CK+  + E+     EM  +   P VVTYNT+  GL ++ ++  A  + ++MQ S DV
Sbjct: 362 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDV 421

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+T I+GLCK+  +VEA +L   +    C   +  Y+ +IDGLCK G+LE A  
Sbjct: 422 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 481

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L Q + R G  PNVVTY  +I G C   ++D+A  +  +M   G  PN VT+NT++ G  
Sbjct: 482 LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLC 541

Query: 242 RNNETSKVVELLHRMDE 258
            +    +  +L+ RM +
Sbjct: 542 VSGRIKEAQQLVQRMKD 558



 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 145/257 (56%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +LL+ M +RG  PN   Y+ L+D  C    +  A+++   M   G   NV+T+N+
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK  +V+++  L   M++KG+RP VVTY+ L  GL +  +   A ++ +EM+   
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY+  I GLCK   I EA ++ R +    C   +  YS +I   CK GKL  A 
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTLMLG 239
           +  Q + +    P+VVTYN +I G C  G++ +A  +   M+  G V P+ VT++T++ G
Sbjct: 375 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVING 434

Query: 240 CIRNNETSKVVELLHRM 256
             +++   +  +LL RM
Sbjct: 435 LCKSDMLVEAQKLLDRM 451



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 129/251 (51%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           +D +   G  PN   Y+ LI  F    +++ A +L   M   GC  N+VTYN L++  CK
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              V  + ++  +M+  G  P V+T+N+L  G  +   V+ A KL   M    +     T
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y+  IDGLCK+   +EA E+   ++          YS LI GLCK  K+E A ++ + + 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G  P+VV Y+ +IH FC  G++ +A     +M  +  +P+ VT+NT++ G  +  + +
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 248 KVVELLHRMDE 258
           +   +L +M E
Sbjct: 407 EAQVILEQMQE 417



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 3/245 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G    AF +++L+       +   A +LF S  +  C  +V +YN +I+G+C   D+  +
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L  EM S G  P   T+  +   +     ++ A+   D ++         TY   I  
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAA 188

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
             +   + EA +L   +R   C   +  Y+ L+D LCK+  +  A ++ + +   G  PN
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V+T+N ++ GFC  G +D A  L   M AKG+ PN VT++ L+ G  ++ +  +  E+L 
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 255 RMDER 259
            M  R
Sbjct: 309 EMKTR 313



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 3   EASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA  +L+ M + G V P+   YST+I+G C +  +  A++L   M   GC  +VVTY T+
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK   +EE+  L   M   G  P VVTY TL  GL +  +V+ A ++ +EM+++  
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETA 179
                TYNT ++GLC +G I EA +L + ++  + E   +A  Y  +++ L     ++ A
Sbjct: 527 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 586

Query: 180 WELFQSL 186
            +L + +
Sbjct: 587 EQLLEQM 593



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 2/121 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  M + G  PN   Y+TLI G C   ++D A  +   M   GC  N+VTYNT
Sbjct: 476 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 535

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           ++NG C +  ++E+  L   M        P   TY T+ + L     V+ A +L ++M+ 
Sbjct: 536 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595

Query: 119 S 119
           +
Sbjct: 596 T 596


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 147/257 (57%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L+ M   GV P+AF YS LI G C   +I+ A ++   M  +GC  +VV Y+++I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DV 121
           + +CK+  + E+     EM  +   P VVTYNT+  GL ++ ++  A  + D+MQ S DV
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+T I+GLCK+  +VEA +L   +    C   +  Y+ +IDGLCK G+LE A  
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 359

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L Q + R G  PNVVTY  +I G C   ++D+A  +  +M   G  PN VT+NT++ G  
Sbjct: 360 LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLC 419

Query: 242 RNNETSKVVELLHRMDE 258
            +    +  +L+ RM +
Sbjct: 420 VSGRIKEAQQLVQRMKD 436



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 146/257 (56%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +LL+ M +RG  PN   Y+ L+D  C    +  A+++   M   G   NV+T+N+
Sbjct: 73  LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 132

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK  +V+++  L   M++KG+RP VVTY+ L  GL +  +   A ++ +EM+ S 
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY+  I GLCK   I EA ++ R +    C   +  YS +I   CK GKL  A 
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 252

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTLMLG 239
           +  Q + +    P+VVTYN +I G C  G++ +A  +   M+  G V P+ VT++T++ G
Sbjct: 253 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVING 312

Query: 240 CIRNNETSKVVELLHRM 256
             +++   +  +LL RM
Sbjct: 313 LCKSDMLVEAQKLLDRM 329



 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 129/251 (51%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           +D +   G  PN   Y+ LI  F    +++ A +L   M   GC  N+VTYN L++  CK
Sbjct: 45  MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              V  + ++  +M+  G  P V+T+N+L  G  +   V+ A KL   M    +     T
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 164

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y+  IDGLCK+   +EA E+   ++          YS LI GLCK  K+E A ++ + + 
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G  P+VV Y+ +IH FC  G++ +A     +M  +  +P+ VT+NT++ G  +  + +
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284

Query: 248 KVVELLHRMDE 258
           +   +L +M E
Sbjct: 285 EAQVILDQMQE 295



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 3/187 (1%)

Query: 3   EASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA  +LD M + G V P+   YST+I+G C +  +  A++L   M   GC  +VVTY T+
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK   +EE+  L   M   G  P VVTY TL  GL +  +V+ A ++ +EM+++  
Sbjct: 345 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 404

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETA 179
                TYNT ++GLC +G I EA +L + ++  + E   +A  Y  +++ L     ++ A
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464

Query: 180 WELFQSL 186
            +L + +
Sbjct: 465 EQLLEQM 471



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 2/118 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  M + G  PN   Y+TLI G C   ++D A  +   M   GC  N+VTYNT
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           ++NG C +  ++E+  L   M        P   TY T+ + L     V+ A +L ++M
Sbjct: 414 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C  G L  A EL + +   G  P+  T+  +I    N G +D A D    M   G  PN 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           VT+  L+    R  +  + ++LL  M ER 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERG 87


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 147/254 (57%), Gaps = 4/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D M+ R + P+   Y+++I GFC     D A+ +F  M       +VVT+NT+I
Sbjct: 168 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 223

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + YC+ K V+E + L  E+  +G+     TYNTL HG  E+  +  A  LF EM    V 
Sbjct: 224 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 283

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T T N  + G C+N  + EA ELF  +++ K +L   AY+ +I G+CK  K++ AW+L
Sbjct: 284 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 343

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SLP  G+ P+V TYN+MI GFC    +  A+ LF  M+  G  P+  T+NTL+ GC++
Sbjct: 344 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 403

Query: 243 NNETSKVVELLHRM 256
             E  K +EL+  M
Sbjct: 404 AGEIDKSIELISEM 417



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 4/250 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M +  ++P+  +YS +ID  C  G    A+ LF  M   G   NV TYN +I+
Sbjct: 64  ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 123

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C      ++  L  +M+ + I P V+T+N L     +  ++  A KL DEM H  +  
Sbjct: 124 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 183

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T TYN+ I G CK+    +A  +F     L     +  ++ +ID  C+  +++   +L 
Sbjct: 184 DTVTYNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLL 239

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + R GL+ N  TYN +IHGFC    ++ A DLF +M + GV P+ +T N L+ G   N
Sbjct: 240 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 299

Query: 244 NETSKVVELL 253
            +  + +EL 
Sbjct: 300 EKLEEALELF 309



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 4/231 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  + DLM      P+   ++T+ID +C    +D   +L   +   G + N  TYNTL
Sbjct: 202 DDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 257

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+C+  ++  + +L+ EM+S G+ P  +T N L +G  E  ++E AL+LF+ +Q S +
Sbjct: 258 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 317

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +T  YN  I G+CK   + EA +LF +L +   E  ++ Y+ +I G C    +  A  
Sbjct: 318 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 377

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           LF  +   G  P+  TYN +I G    G++DK+ +L  +M + G + +  T
Sbjct: 378 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 428



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 39/291 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M+++G+ PN F Y+ +IDGFC  G    A+ L   M       +V+T+N LI
Sbjct: 98  DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 157

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +   K   + E+  L  EML + I P  VTYN++ +G  + ++ + A  +FD M   DV 
Sbjct: 158 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 217

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT ID  C+   + E  +L R +           Y+ LI G C++  L  A +L
Sbjct: 218 ----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 273

Query: 183 FQSLPRVGLMPNVVT-----------------------------------YNIMIHGFCN 207
           FQ +   G+ P+ +T                                   YNI+IHG C 
Sbjct: 274 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 333

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             ++D+A DLF  +   GV P+  T+N ++ G    +  S    L H+M +
Sbjct: 334 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 384



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 125/249 (50%), Gaps = 4/249 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ P    ++TLI+G CL G +  A  L   M   G   +VVTY T++NG CK  D
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            + +LNL S+M    I+P VV Y+ +   L +      A  LF EM    +A    TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG C  G   +A  L R +   +    +  ++ LI    K GKL  A +L   +    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+ VTYN MI+GFC   + D A  +F D+ A   +P+ VTFNT++    R     + +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 251 ELLHRMDER 259
           +LL  +  R
Sbjct: 237 QLLREISRR 245



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 4/221 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  +LL  + +RG+  N   Y+TLI GFC    ++ A++LF  M  +G   + +T N 
Sbjct: 232 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C+ + +EE+L L+  +    I    V YN + HG+ +  +V+ A  LF  +    
Sbjct: 292 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYN  I G C    I +A  LF  ++    E     Y+ LI G  K G+++ + 
Sbjct: 352 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 411

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           EL   +   G   +  T   M+     DG++DK+   F DM
Sbjct: 412 ELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 448


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 147/254 (57%), Gaps = 4/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D M+ R + P+   Y+++I GFC     D A+ +F  M       +VVT+NT+I
Sbjct: 379 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 434

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + YC+ K V+E + L  E+  +G+     TYNTL HG  E+  +  A  LF EM    V 
Sbjct: 435 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 494

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T T N  + G C+N  + EA ELF  +++ K +L   AY+ +I G+CK  K++ AW+L
Sbjct: 495 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 554

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SLP  G+ P+V TYN+MI GFC    +  A+ LF  M+  G  P+  T+NTL+ GC++
Sbjct: 555 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 614

Query: 243 NNETSKVVELLHRM 256
             E  K +EL+  M
Sbjct: 615 AGEIDKSIELISEM 628



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 4/231 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  + DLM      P+   ++T+ID +C    +D   +L   +   G + N  TYNTL
Sbjct: 413 DDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 468

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+C+  ++  + +L+ EM+S G+ P  +T N L +G  E  ++E AL+LF+ +Q S +
Sbjct: 469 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 528

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +T  YN  I G+CK   + EA +LF +L +   E  ++ Y+ +I G C    +  A  
Sbjct: 529 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 588

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           LF  +   G  P+  TYN +I G    G++DK+ +L  +M + G + +  T
Sbjct: 589 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 639



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 4/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E   L D M++ G+ P    ++TLI+G CL G +  A  L   M   G   +VVTY T
Sbjct: 202 MVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 261

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D + +LNL S+M    I+P VV Y+ +   L +      A  LF EM    
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TYN  IDG C  G   +A  L R +   +    +  ++ LI    K GKL  A 
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 381

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +    + P+ VTYN MI+GFC   + D A  +F D+ A   +P+ VTFNT++   
Sbjct: 382 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVY 437

Query: 241 IRNNETSKVVELLHRMDER 259
            R     + ++LL  +  R
Sbjct: 438 CRAKRVDEGMQLLREISRR 456



 Score =  137 bits (344), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 39/291 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M+++G+ PN F Y+ +IDGFC  G    A+ L   M       +V+T+N LI
Sbjct: 309 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 368

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +   K   + E+  L  EML + I P  VTYN++ +G  + ++ + A  +FD M   DV 
Sbjct: 369 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 428

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT ID  C+   + E  +L R +           Y+ LI G C++  L  A +L
Sbjct: 429 ----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 484

Query: 183 FQSLPRVGLMPNVVT-----------------------------------YNIMIHGFCN 207
           FQ +   G+ P+ +T                                   YNI+IHG C 
Sbjct: 485 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 544

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             ++D+A DLF  +   GV P+  T+N ++ G    +  S    L H+M +
Sbjct: 545 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 595



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 10/269 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    D M++      A   + +I  F      D A  L+  M+I     N+ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL---------- 110
           LI  +C    +  SL+ + ++   G +P VVT+NTL HGL    ++  AL          
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
            LFD+M    +     T+NT I+GLC  G ++EAA L   +      + +  Y  +++G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK+G  ++A  L   +    + P+VV Y+ +I   C DG    A  LF +M  KG+APN 
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDER 259
            T+N ++ G       S    LL  M ER
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIER 355



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 129/244 (52%), Gaps = 10/244 (4%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHN----------VVTYNT 60
           + + G +P+   ++TL+ G CL   I  A  LF  M   G + +          V+T+NT
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    V E+  L ++M+ KG+   VVTY T+ +G+ ++   + AL L  +M+ + 
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+  ID LCK+G+  +A  LF  +        +  Y+C+IDG C  G+   A 
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +    + P+V+T+N +I     +G++ +A  L  +M  + + P+ VT+N+++ G 
Sbjct: 347 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 406

Query: 241 IRNN 244
            ++N
Sbjct: 407 CKHN 410



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 4/221 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  +LL  + +RG+  N   Y+TLI GFC    ++ A++LF  M  +G   + +T N 
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C+ + +EE+L L+  +    I    V YN + HG+ +  +V+ A  LF  +    
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYN  I G C    I +A  LF  ++    E     Y+ LI G  K G+++ + 
Sbjct: 563 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 622

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           EL   +   G   +  T   M+     DG++DK+   F DM
Sbjct: 623 ELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 659


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 147/254 (57%), Gaps = 4/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D M+ R + P+   Y+++I GFC     D A+ +F  M       +VVT+NT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 439

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + YC+ K V+E + L  E+  +G+     TYNTL HG  E+  +  A  LF EM    V 
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T T N  + G C+N  + EA ELF  +++ K +L   AY+ +I G+CK  K++ AW+L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SLP  G+ P+V TYN+MI GFC    +  A+ LF  M+  G  P+  T+NTL+ GC++
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619

Query: 243 NNETSKVVELLHRM 256
             E  K +EL+  M
Sbjct: 620 AGEIDKSIELISEM 633



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 4/231 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  + DLM      P+   ++T+ID +C    +D   +L   +   G + N  TYNTL
Sbjct: 418 DDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+C+  ++  + +L+ EM+S G+ P  +T N L +G  E  ++E AL+LF+ +Q S +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +T  YN  I G+CK   + EA +LF +L +   E  ++ Y+ +I G C    +  A  
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           LF  +   G  P+  TYN +I G    G++DK+ +L  +M + G + +  T
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 129/257 (50%), Gaps = 4/257 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M++ G+ P    ++TLI+G CL G +  A  L   M   G   +VVTY T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK  D + +LNL S+M    I+P VV Y+ +   L +      A  LF EM    +A
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  IDG C  G   +A  L R +   +    +  ++ LI    K GKL  A +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +    + P+ VTYN MI+GFC   + D A  +F D+ A   +P+ VTFNT++    R
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCR 444

Query: 243 NNETSKVVELLHRMDER 259
                + ++LL  +  R
Sbjct: 445 AKRVDEGMQLLREISRR 461



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 39/291 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M+++G+ PN F Y+ +IDGFC  G    A+ L   M       +V+T+N LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +   K   + E+  L  EML + I P  VTYN++ +G  + ++ + A  +FD M   DV 
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 433

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT ID  C+   + E  +L R +           Y+ LI G C++  L  A +L
Sbjct: 434 ----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489

Query: 183 FQSLPRVGLMPNVVT-----------------------------------YNIMIHGFCN 207
           FQ +   G+ P+ +T                                   YNI+IHG C 
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             ++D+A DLF  +   GV P+  T+N ++ G    +  S    L H+M +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 15/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    D M++      A   + +I  F      D A  L+  M+I     N+ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL---------- 110
           LI  +C    +  SL+ + ++   G +P VVT+NTL HGL    ++  AL          
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 111 -----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
                 LFD+M    +     T+NT I+GLC  G ++EAA L   +      + +  Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +++G+CK+G  ++A  L   +    + P+VV Y+ +I   C DG    A  LF +M  KG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +APN  T+N ++ G       S    LL  M ER
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 131/273 (47%), Gaps = 19/273 (6%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  L   M  R +  N + ++ LI  FC   ++  +   F  +   G   +VVT+NTL
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 62  INGYCKTKDVEESLNLYS---------------EMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           ++G C    + E+L L+                +M+  G+ P V+T+NTL +GL    +V
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
             A  L ++M    +  +  TY T ++G+CK G    A  L   +     +  +  YS +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           ID LCK G    A  LF  +   G+ PNV TYN MI GFC+ G+   A  L  DM  + +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362

Query: 227 APNCVTFNTLMLGCIRNN---ETSKVV-ELLHR 255
            P+ +TFN L+   ++     E  K+  E+LHR
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 4/221 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  +LL  + +RG+  N   Y+TLI GFC    ++ A++LF  M  +G   + +T N 
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C+ + +EE+L L+  +    I    V YN + HG+ +  +V+ A  LF  +    
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYN  I G C    I +A  LF  ++    E     Y+ LI G  K G+++ + 
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           EL   +   G   +  T   M+     DG++DK+   F DM
Sbjct: 628 ELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 664


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  187 bits (476), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 147/254 (57%), Gaps = 4/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D M+ R + P+   Y+++I GFC     D A+ +F  M       +VVT+NT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 439

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + YC+ K V+E + L  E+  +G+     TYNTL HG  E+  +  A  LF EM    V 
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T T N  + G C+N  + EA ELF  +++ K +L   AY+ +I G+CK  K++ AW+L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SLP  G+ P+V TYN+MI GFC    +  A+ LF  M+  G  P+  T+NTL+ GC++
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619

Query: 243 NNETSKVVELLHRM 256
             E  K +EL+  M
Sbjct: 620 AGEIDKSIELISEM 633



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 125/232 (53%), Gaps = 4/232 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            D+A  + DLM      P+   ++T+ID +C    +D   +L   +   G + N  TYNT
Sbjct: 417 FDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+  ++  + +L+ EM+S G+ P  +T N L +G  E  ++E AL+LF+ +Q S 
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T  YN  I G+CK   + EA +LF +L +   E  ++ Y+ +I G C    +  A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            LF  +   G  P+  TYN +I G    G++DK+ +L  +M + G + +  T
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644



 Score =  141 bits (355), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 129/257 (50%), Gaps = 4/257 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M++ G+ P    ++TLI+G CL G +  A  L   M   G   +VVTY T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK  D + +LNL S+M    I+P VV Y+ +   L +      A  LF EM    +A
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  IDG C  G   +A  L R +   +    +  ++ LI    K GKL  A +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +    + P+ VTYN MI+GFC   + D A  +F D+ A   +P+ VTFNT++    R
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCR 444

Query: 243 NNETSKVVELLHRMDER 259
                + ++LL  +  R
Sbjct: 445 AKRVDEGMQLLREISRR 461



 Score =  137 bits (344), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 39/291 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M+++G+ PN F Y+ +IDGFC  G    A+ L   M       +V+T+N LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +   K   + E+  L  EML + I P  VTYN++ +G  + ++ + A  +FD M   DV 
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 433

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT ID  C+   + E  +L R +           Y+ LI G C++  L  A +L
Sbjct: 434 ----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489

Query: 183 FQSLPRVGLMPNVVT-----------------------------------YNIMIHGFCN 207
           FQ +   G+ P+ +T                                   YNI+IHG C 
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             ++D+A DLF  +   GV P+  T+N ++ G    +  S    L H+M +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 15/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    D M++      A   + +I  F      D A  L+  M+I     N+ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL---------- 110
           LI  +C    +  SL+ + ++   G +P VVT+NTL HGL    ++  AL          
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 111 -----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
                 LFD+M    +     T+NT I+GLC  G ++EAA L   +      + +  Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +++G+CK+G  ++A  L   +    + P+VV Y+ +I   C DG    A  LF +M  KG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +APN  T+N ++ G       S    LL  M ER
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 131/273 (47%), Gaps = 19/273 (6%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  L   M  R +  N + ++ LI  FC   ++  +   F  +   G   +VVT+NTL
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 62  INGYCKTKDVEESLNLYS---------------EMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           ++G C    + E+L L+                +M+  G+ P V+T+NTL +GL    +V
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
             A  L ++M    +  +  TY T ++G+CK G    A  L   +     +  +  YS +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           ID LCK G    A  LF  +   G+ PNV TYN MI GFC+ G+   A  L  DM  + +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362

Query: 227 APNCVTFNTLMLGCIRNN---ETSKVV-ELLHR 255
            P+ +TFN L+   ++     E  K+  E+LHR
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 73/137 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L +++    +  +   Y+ +I G C   ++D A +LF S+ I+G   +V TYN 
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C    + ++  L+ +M   G  P   TYNTL  G  +  +++ +++L  EM+ + 
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637

Query: 121 VAAETSTYNTFIDGLCK 137
            + +  T     + +C+
Sbjct: 638 FSGDAFTIKMAEEIICR 654


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  187 bits (476), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 137/232 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M++  + P+   YS+LI+G CL   ID A ++F  M   GC+ +VV+YNTLI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K VE+ + L+ EM  +G+    VTYNTL  G F+   V+ A + F +M    ++
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GLC NG + +A  +F  ++  + +L I  Y+ +I G+CK GK+E AW L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           F SL   GL P++VTY  M+ G C  G + +   L+  M+ +G+  N  T +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G +P+   Y+ +ID  C T  ++ A + F  ++  G   NVVTY  
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG C +    ++  L S+M+ K I P V+TY+ L     +  +V  A +LF+EM    
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I+GLC +  I EA ++F  +    C   + +Y+ LI+G CK  ++E   
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ + + GL+ N VTYN +I GF   G +DKA + F  M+  G++P+  T+N L+ G 
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410

Query: 241 IRNNETSKVVELLHRMDER 259
             N E  K + +   M +R
Sbjct: 411 CDNGELEKALVIFEDMQKR 429



 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 136/237 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+RLL  MI++ + PN   YS L+D F   G++  A+ELF  M       ++VTY++LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C    ++E+  ++  M+SKG    VV+YNTL +G  +  +VE  +KLF EM    + 
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           + T TYNT I G  + G + +A E F  +        I  Y+ L+ GLC  G+LE A  +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F+ + +  +  ++VTY  +I G C  G++++A  LF  +  KG+ P+ VT+ T+M G
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 135/254 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+     +L++GFC    +  A  L   M   G   ++V YN +I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CKTK V ++ + + E+  KGIRP VVTY  L +GL    +   A +L  +M    +  
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY+  +D   KNG ++EA ELF  +  +  +  I  YS LI+GLC   +++ A ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G + +VV+YN +I+GFC   +++    LF +M  +G+  N VT+NTL+ G  + 
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378

Query: 244 NETSKVVELLHRMD 257
            +  K  E   +MD
Sbjct: 379 GDVDKAQEFFSQMD 392



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 126/229 (55%), Gaps = 8/229 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ DLM+ +G   +   Y+TLI+GFC    ++   +LF  M   G + N VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+ +  DV+++   +S+M   GI P + TYN L  GL +  ++E AL +F++MQ  +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T I G+CK G + EA  LF +L +   +  I  Y+ ++ GLC  G L    
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L+  + + GLM N  T         +DG +  + +L   M + G AP+
Sbjct: 491 ALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCGYAPS 531



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 130/256 (50%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   ++ L+       + D    L   M++ G  +++ T+N 
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN +C    V  +L++  +ML  G  P  VT  +L +G    ++V  A+ L D+M    
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   YN  ID LCK   + +A + F+ +        +  Y+ L++GLC   +   A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            L   + +  + PNV+TY+ ++  F  +G++ +A +LF +M    + P+ VT+++L+ G 
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 240 CI--RNNETSKVVELL 253
           C+  R +E +++ +L+
Sbjct: 306 CLHDRIDEANQMFDLM 321



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 112/222 (50%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           +++ A +LF  M  +    ++V +N L++   K K  +  ++L  +M   GIR  + T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + +      QV  AL +  +M       +  T  + ++G C+   + +A  L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             +  I AY+ +ID LCK  ++  A++ F+ + R G+ PNVVTY  +++G CN  +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             L  DM  K + PN +T++ L+   ++N +  +  EL   M
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 57/116 (49%)

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A +LF  +   +    I  ++ L+  + K+ K +    L + +  +G+  ++ T+NI+I
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + FC   Q+  A  +   M   G  P+ VT  +L+ G  R N  S  V L+ +M E
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 138/226 (61%), Gaps = 3/226 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L + M +R V P+ F Y++LI+G C+ G +D A+++   M   GC+ +VVTYNTLI
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK+K V+E   L+ EM  +G+    +TYNT+  G F+  + + A ++F  M   D  
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSR 378

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  + GLC N  + +A  LF  ++  + EL I  Y+ +I G+CKIG +E AW+L
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           F+SL   GL P+VV+Y  MI GFC   Q DK+  L+  M+  G+ P
Sbjct: 439 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 138/256 (53%), Gaps = 3/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+RL+  M+ R + PN   ++ +ID F   G+   A +L+  M       +V TYN+LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C    V+E+  +   M++KG  P VVTYNTL +G  +  +V+   KLF EM    + 
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TYNT I G  + G    A E+F  +        I  YS L+ GLC   ++E A  L
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVL 403

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+++ +  +  ++ TYNI+IHG C  G ++ A DLF  +  KG+ P+ V++ T++ G  R
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463

Query: 243 NNETSKVVELLHRMDE 258
             +  K   L  +M E
Sbjct: 464 KRQWDKSDLLYRKMQE 479



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 140/256 (54%), Gaps = 3/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+  M + G RP+  +Y+T+IDG C  G ++ A ELF  M+ +G   + VTYN+L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C +    ++  L  +M+ + I P V+T+  +     +  +   A+KL++EM    V 
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN+ I+GLC +G + EA ++   +    C   +  Y+ LI+G CK  +++   +L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ + + GL+ + +TYN +I G+   G+ D A ++F  M+++   PN  T++ L+ G   
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 393

Query: 243 NNETSKVVELLHRMDE 258
           N    K + L   M +
Sbjct: 394 NWRVEKALVLFENMQK 409



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 131/249 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G  P+    S+LI+GFC    +  A +L   M+  G   +VV YNT+I+G CK   
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V +++ L+  M   G+R   VTYN+L  GL    +   A +L  +M   D+     T+  
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID   K G   EA +L+  +     +  +  Y+ LI+GLC  G+++ A ++   +   G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +P+VVTYN +I+GFC   ++D+   LF +M  +G+  + +T+NT++ G  +        
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369

Query: 251 ELLHRMDER 259
           E+  RMD R
Sbjct: 370 EIFSRMDSR 378



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 133/245 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + Y+ +I+  C       A  +   M   G   +VVT ++LING+C+   V ++
Sbjct: 99  GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L S+M   G RP VV YNT+  G  +I  V  A++LFD M+   V A+  TYN+ + G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC +G   +AA L R + +      +  ++ +ID   K GK   A +L++ + R  + P+
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYN +I+G C  G++D+A  +   M  KG  P+ VT+NTL+ G  ++    +  +L  
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338

Query: 255 RMDER 259
            M +R
Sbjct: 339 EMAQR 343



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 4/237 (1%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           +ST      L  EID    LF  M  +  + ++V ++ +++   K+K+ +  ++L+  M 
Sbjct: 41  FSTKRSSMNLEEEID----LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
             GI   + +YN + + L    +   AL +  +M       +  T ++ I+G C+   + 
Sbjct: 97  VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A +L   +  +     +  Y+ +IDG CKIG +  A ELF  + R G+  + VTYN ++
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            G C  G+   A  L  DM  + + PN +TF  ++   ++  + S+ ++L   M  R
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 94/191 (49%)

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           ++EE ++L+ +M+     P++V ++ +   + +    +  + LF  M+   +  +  +YN
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I+ LC+    V A  +   +     E  +   S LI+G C+  ++  A +L   +  +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+VV YN +I G C  G ++ A +LF  ME  GV  + VT+N+L+ G   +   S  
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 250 VELLHRMDERN 260
             L+  M  R+
Sbjct: 229 ARLMRDMVMRD 239



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 50/88 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + M +  +  +   Y+ +I G C  G ++ A +LF S+   G   +VV+Y T
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRP 88
           +I+G+C+ +  ++S  LY +M   G+ P
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDGLLP 484


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 151/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  ++ +M++ GV P    Y+TL+DG+CL  E+ +A+ +   +       N  +YN 
Sbjct: 279 IKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNI 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK K V+E+L L+ EM  +GI P  VTYN+L  GL +  ++ +A +L DEM ++ 
Sbjct: 339 MINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNC 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TYN+ ID  CKN ++ +A  L + ++    +  +  Y+ LIDGLCK G+L+ A 
Sbjct: 399 IPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQ 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++FQ L   G   N  TYNIMI+G C +G  D+A  L   ME  G+ P+ VT+ T++   
Sbjct: 459 DVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQAL 518

Query: 241 IRNNETSKVVELLHRM 256
              +E  K  +LL  M
Sbjct: 519 FHKDENEKAQKLLREM 534



 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 136/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL + M+ + + P+A+ ++ L+D  C  G+I  A+ +   M   G    VVTYNTL+
Sbjct: 246 DAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLM 305

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC   +V ++ ++ S +    + P   +YN + +G  +I  V+ AL LF EM    +A
Sbjct: 306 DGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIA 365

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ IDGLCK G I  A EL   +        I  Y+ LID  CK   ++ A  L
Sbjct: 366 PHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIAL 425

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G+ PN+ TYNI+I G C  GQ+  A D+F D+  KG   N  T+N ++ G  +
Sbjct: 426 VKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCK 485

Query: 243 NNETSKVVELLHRMDE 258
                +   LL +M++
Sbjct: 486 EGLFDEAEVLLSKMED 501



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA    D ++  G   N   Y  LI+G C  G+   A ++   ++      NVV Y+T
Sbjct: 139 VNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYST 198

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK K V ++  LYSEM+ K I PTVVT+++L +G   + + + A +LF+EM   +
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  +D LCK G I EA  +   +     E  +  Y+ L+DG C + ++  A 
Sbjct: 259 INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAK 318

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   + R+ + PN  +YNIMI+GFC    +D+A  LF +M  +G+AP+ VT+N+L+ G 
Sbjct: 319 HVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGL 378

Query: 241 IRNNETSKVVELLHRM 256
            +        EL+  M
Sbjct: 379 CKAGRIPYAWELVDEM 394



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 125/249 (50%), Gaps = 17/249 (6%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  +GV+P+ F  S LI+ +C  G++  A  +F  +              L  G C    
Sbjct: 93  MESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKI--------------LKMGLCLNGK 138

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L  +  +L+ G     VTY  L +GL ++ Q   AL++  +++   V      Y+T
Sbjct: 139 VNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYST 198

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGLCK+  + +A  L+  + V +    +  +S LI G C +GK + A+ LF  +    
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK-- 248
           + P+  T+NI++   C +G++ +A ++   M  +GV P  VT+NTLM G    NE  K  
Sbjct: 259 INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAK 318

Query: 249 -VVELLHRM 256
            V+ ++ RM
Sbjct: 319 HVLSIISRM 327



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 35/226 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M  RG+ P+   Y++LIDG C  G I  A EL   M  N    ++VTYN+
Sbjct: 349 VDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNS 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK + V++++ L  ++   GI+P + TYN L  GL +  Q+++A  +F ++    
Sbjct: 409 LIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKG 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  I+GLCK G   EA  L                         + K+E   
Sbjct: 469 YNVNAWTYNIMINGLCKEGLFDEAEVL-------------------------LSKMEDN- 502

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
                    G++P+ VTY  +I    +  + +KA  L  +M  KGV
Sbjct: 503 ---------GIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 29/226 (12%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD-VEESLN 76
           PN FV    +  F      +R R++  +  I       V +N ++    KTK+     L+
Sbjct: 42  PNGFVVDNAVLSF------NRMRQIRQTPSI-------VEFNKILTYLIKTKNHYPTVLS 88

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L ++M SKG++P + T + L +    + Q+  A  +F ++                 GLC
Sbjct: 89  LSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKM--------------GLC 134

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
            NG + EA      +  L   L    Y  LI+GLCK+G+   A ++ + +    +  NVV
Sbjct: 135 LNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVV 194

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI 241
            Y+ +I G C D  +  A+ L+ +M  K + P  VTF++L+ G CI
Sbjct: 195 MYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCI 240


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  187 bits (475), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 154/259 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M ++GV PN + Y+ L++G+CL  E++ A ++F  M   GC  +V +Y+ 
Sbjct: 207 VSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSI 266

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK++ ++E+  L ++M  K + P  VTYNTL  GL     +  A +LF +M  S 
Sbjct: 267 LINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSG 326

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  +DGLCK+G++ EA +L  +++  K E  I  Y+ LI G+   GKLE A 
Sbjct: 327 MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAK 386

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  L   G+ P+V TYNIMI G   +G  D+A+ LF  ME  G  P+  ++N ++ G 
Sbjct: 387 ELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGF 446

Query: 241 IRNNETSKVVELLHRMDER 259
           ++N + S  ++L+  M  R
Sbjct: 447 LQNQDPSTAIQLIDEMVGR 465



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 141/258 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M  R   PN   ++ L+D  C  G +  AR +F +M   G   N+ TYN 
Sbjct: 172 IKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNA 231

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYC   ++ ++  ++  M+ KG  P+V +Y+ L +G  +  +++ A  L  +M   +
Sbjct: 232 LMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKE 291

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TYNT + GLC    ++EA ELF+ +        +  YS L+DGLCK G LE A 
Sbjct: 292 LIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEAL 351

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L  S+    L P++V YNI+I G    G+++ A +LF  + A G+ P+  T+N ++ G 
Sbjct: 352 KLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGL 411

Query: 241 IRNNETSKVVELLHRMDE 258
           ++   + +  +L  +M++
Sbjct: 412 LKEGLSDEAYKLFRKMED 429



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 123/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++AS++ ++M+ +G  P+   YS LI+G+C +  ID A+ L   M     + N VTYNT
Sbjct: 242 MNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C    + E+  L+ +M S G+ P + TY+ L  GL +   +E ALKL   MQ   
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK 361

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I G+   G +  A ELF  L        +  Y+ +I GL K G  + A+
Sbjct: 362 LEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAY 421

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF+ +   G +P+  +YN++I GF  +     A  L  +M  +  + +  TF  L+
Sbjct: 422 KLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      MI    RP+       +       +      L   MD+ G  HN  T N 
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  C+   +  ++++ S+M   GI+P  VT+ TL +GL    +++ A++LF+EM   D
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T T+   +D LCK G + EA  +F T+     E  I  Y+ L++G C   ++  A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ +   G  P+V +Y+I+I+G+C   ++D+A  L   M  K + PN VT+NTLM G 
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 241 IRNNETSKVVELLHRM 256
              +   +  EL  +M
Sbjct: 307 CHASSLLEAQELFKKM 322



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  N +  + LI+  C    I  A  +   M   G   + VT+ TLING C    ++E+
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L++EM  +   P  VT+  L   L +   V  A  +F+ M    V     TYN  ++G
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            C    + +A+++F  +    C   + +YS LI+G CK  +++ A  L   +    L+PN
Sbjct: 236 YCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPN 295

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            VTYN ++ G C+   + +A +LF  M + G+ PN  T++ L+ G  ++    + ++LL 
Sbjct: 296 TVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLT 355

Query: 255 RMDER 259
            M ER
Sbjct: 356 SMQER 360



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 72/133 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +LL  M +R + P+  +Y+ LI G  + G+++ A+ELF  +  NG   +V TYN 
Sbjct: 347 LEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNI 406

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G  K    +E+  L+ +M   G  P   +YN +  G  +      A++L DEM    
Sbjct: 407 MIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRR 466

Query: 121 VAAETSTYNTFID 133
            +A++ST+   +D
Sbjct: 467 FSADSSTFKMLLD 479



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 40/95 (42%)

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            +  + K  +  T   L   +   G+  N  T NI+I+  C    +  A  +   M   G
Sbjct: 92  FLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLG 151

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + P+ VTF TL+ G        + VEL + M  R+
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 149/254 (58%), Gaps = 4/254 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + GV P    Y+T+I+G C + ++    ELF  +   G   +VVTYNTLI+  CK  D
Sbjct: 28  MARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 87

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--QHSDVAAETSTY 128
           +EE+  L+ +M S+G  P VVTY+ L +GL ++ +++ A +L  EM  +  DV     TY
Sbjct: 88  LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 147

Query: 129 NTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           N+F+DGLCK     EA EL R+LR   L+       +S LIDGLCK G+++ A  +F  +
Sbjct: 148 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 207

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G +PNV+TYN +++G C   +M++AH +   M  KGV P+ +T++ L+    + +  
Sbjct: 208 IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 267

Query: 247 SKVVELLHRMDERN 260
            + +ELLH M  R 
Sbjct: 268 DEALELLHGMASRG 281



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 142/263 (53%), Gaps = 9/263 (3%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + +++RG  P+   Y+TLID  C  G+++ AR L   M   GC+ NVVTY+ LING C
Sbjct: 59  LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLC 118

Query: 67  KTKDVEESLNLYSEMLSKG--IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD--VA 122
           K   ++E+  L  EM  K   + P ++TYN+   GL +      A +L   ++     V+
Sbjct: 119 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 178

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T T++T IDGLCK G I EA  +F  +        +  Y+ L++GLCK  K+E A  +
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC-----VTFNTLM 237
            +S+   G+ P+V+TY++++  FC   ++D+A +L   M ++G  PN      VTFN L+
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +     +   L   M  +N
Sbjct: 299 AGACKAGNFEQASALFEEMVAKN 321



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 131/259 (50%), Gaps = 5/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNV----- 55
           M+ A  +++ M+ +GV P+   YS L+D FC    +D A EL   M   GC  NV     
Sbjct: 232 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           VT+N LI G CK  + E++  L+ EM++K ++P V+T+  L  GL +  QVE A  + D 
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M +  V     TYN  + GLCK+G I EA +    +    C      Y  L+  LC+  +
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR 411

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + A +L   L   G  P+ VTYNI++ G    G+ ++A  +  +M  KG  P+  TF  
Sbjct: 412 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 471

Query: 236 LMLGCIRNNETSKVVELLH 254
              G  R+   +  +ELL 
Sbjct: 472 CFSGLHRSGNLAGTMELLR 490



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + D MI  G  PN   Y+ L++G C   +++RA  +  SM   G   +V+TY+ 
Sbjct: 197 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 256

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTV-----VTYNTLFHGLFEIHQVEHALKLFDE 115
           L++ +CK   V+E+L L   M S+G  P V     VT+N L  G  +    E A  LF+E
Sbjct: 257 LVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEE 316

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M   ++  +  T+   IDGLCK G +  A ++   +  L     +  Y+ L+ GLCK G+
Sbjct: 317 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR 376

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +E A +  + +   G +P+ +TY  +++  C   + D A  L  ++++ G  P+ VT+N 
Sbjct: 377 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNI 436

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+ G  ++ +T + + +L  M
Sbjct: 437 LVDGLWKSGKTEQAITVLEEM 457



 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 132/265 (49%), Gaps = 9/265 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC--MHNVVTY 58
           ++EA RL   M  RG  PN   YS LI+G C  G ID AREL   M    C  + N++TY
Sbjct: 88  LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 147

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           N+ ++G CK     E+  L   +    +R  P  VT++TL  GL +  Q++ A  +FD+M
Sbjct: 148 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 207

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                     TYN  ++GLCK   +  A  +  ++        +  YS L+D  CK  ++
Sbjct: 208 IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 267

Query: 177 ETAWELFQSLPRVGLMPNV-----VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           + A EL   +   G  PNV     VT+NI+I G C  G  ++A  LF +M AK + P+ +
Sbjct: 268 DEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVM 327

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           TF  L+ G  +  +     ++L  M
Sbjct: 328 TFGALIDGLCKAGQVEAARDILDLM 352



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 40/246 (16%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLY-SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           V  YN ++   C+  D   +L ++  EM   G+ PT+VTYNT+ +GL + + +   ++LF
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +E+       +  TYNT ID LCK G + EA  L   +    C   +  YS LI+GLCK+
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 174 GKLETAWELFQSLPRVG--LMPNVVTYN-------------------------------- 199
           G+++ A EL Q + R    ++PN++TYN                                
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 200 -----IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
                 +I G C  GQ+D+A  +F DM A G  PN +T+N L+ G  + ++  +   ++ 
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 255 RMDERN 260
            M ++ 
Sbjct: 241 SMVDKG 246



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/116 (18%), Positives = 55/116 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +L+  +   G  P+   Y+ L+DG   +G+ ++A  +   M   G   +  T+   
Sbjct: 413 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 472

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
            +G  ++ ++  ++ L   +L+KG+ P   T +++   +    +++    +  E +
Sbjct: 473 FSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 137/232 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M++  + P+   YS+L++G CL   ID A ++F  M   GC+ +VV+YNTLI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K VE+ + L+ EM  +G+    VTYNTL  G F+   V+ A + F +M    ++
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GLC NG + +A  +F  ++  + +L I  Y+ +I G+CK GK+E AW L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           F SL   GL P++VTY  M+ G C  G + +   L+  M+ +G+  N  T +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G +P+   Y+ +ID  C T  ++ A + F  ++  G   NVVTY  
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG C +    ++  L S+M+ K I P V+TY+ L     +  +V  A +LF+EM    
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ ++GLC +  I EA ++F  +    C   + +Y+ LI+G CK  ++E   
Sbjct: 291 IDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ + + GL+ N VTYN +I GF   G +DKA + F  M+  G++P+  T+N L+ G 
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410

Query: 241 IRNNETSKVVELLHRMDER 259
             N E  K + +   M +R
Sbjct: 411 CDNGELEKALVIFEDMQKR 429



 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 136/237 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+RLL  MI++ + PN   YS L+D F   G++  A+ELF  M       ++VTY++L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C    ++E+  ++  M+SKG    VV+YNTL +G  +  +VE  +KLF EM    + 
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           + T TYNT I G  + G + +A E F  +        I  Y+ L+ GLC  G+LE A  +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F+ + +  +  ++VTY  +I G C  G++++A  LF  +  KG+ P+ VT+ T+M G
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479



 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 135/254 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+     +L++GFC    +  A  L   M   G   ++V YN +I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CKTK V ++ + + E+  KGIRP VVTY  L +GL    +   A +L  +M    +  
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY+  +D   KNG ++EA ELF  +  +  +  I  YS L++GLC   +++ A ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMF 318

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G + +VV+YN +I+GFC   +++    LF +M  +G+  N VT+NTL+ G  + 
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378

Query: 244 NETSKVVELLHRMD 257
            +  K  E   +MD
Sbjct: 379 GDVDKAQEFFSQMD 392



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 126/229 (55%), Gaps = 8/229 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ DLM+ +G   +   Y+TLI+GFC    ++   +LF  M   G + N VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+ +  DV+++   +S+M   GI P + TYN L  GL +  ++E AL +F++MQ  +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T I G+CK G + EA  LF +L +   +  I  Y+ ++ GLC  G L    
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L+  + + GLM N  T         +DG +  + +L   M + G AP+
Sbjct: 491 ALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCGYAPS 531



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 112/222 (50%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           +++ A +LF  M  +    ++V +N L++   K K  +  ++L  +M   GIR  + T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + +      QV  AL +  +M       +  T  + ++G C+   + +A  L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             +  I AY+ +ID LCK  ++  A++ F+ + R G+ PNVVTY  +++G CN  +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             L  DM  K + PN +T++ L+   ++N +  +  EL   M
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 130/256 (50%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M++    P+   ++ L+       + D    L   M++ G  +++ T+N 
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN +C    V  +L++  +ML  G  P  VT  +L +G    ++V  A+ L D+M    
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   YN  ID LCK   + +A + F+ +        +  Y+ L++GLC   +   A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            L   + +  + PNV+TY+ ++  F  +G++ +A +LF +M    + P+ VT+++L+ G 
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 240 CI--RNNETSKVVELL 253
           C+  R +E +++ +L+
Sbjct: 306 CLHDRIDEANQMFDLM 321



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 57/116 (49%)

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A +LF  +   +    I  ++ L+  + K+ K +    L + +  +G+  ++ T+NI+I
Sbjct: 68  DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + FC   Q+  A  +   M   G  P+ VT  +L+ G  R N  S  V L+ +M E
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 154/259 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L  M + GV PN   YS+L+ G+ L  ++  AR+LF  M   GC  N+ +YN 
Sbjct: 319 VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNI 378

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK K ++E++ L++EM+ +G+ P  V+YNTL HG  ++ ++  A  LF  M  + 
Sbjct: 379 LINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNG 438

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY+  +DG CK GY+ +A  LFR ++    +  +  Y+ L+  +CK G  + A 
Sbjct: 439 NLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDAR 498

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  L   GL P+V  Y  +I+G C +G +D+A + F +MEA G  P+ +++N ++ G 
Sbjct: 499 KLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 558

Query: 241 IRNNETSKVVELLHRMDER 259
           +++ + S+ + L+  M +R
Sbjct: 559 LQHKDESRALLLVGEMRDR 577



 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 144/254 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M+ +G +P+ + Y+T+I+G C  GE   A  L   M+  GC  N+VTY+TLI
Sbjct: 181 QAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLI 240

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  C+ + V E+L+++S M +KGI P + TY +L  GL +  + + A  L +EM   ++ 
Sbjct: 241 DSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIM 300

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +D  CK G + EA  + +T+  +  E  +  YS L+ G      +  A +L
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL 360

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G  PN+ +YNI+I+G+C   ++D+A  LF +M  +G+ PN V++NTL+ G  +
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420

Query: 243 NNETSKVVELLHRM 256
             +  +  +L   M
Sbjct: 421 LGKLREAQDLFRNM 434



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 147/328 (44%), Gaps = 70/328 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    +L  +I+ G++P    ++TLI+G C  GE  +A ELF  M   GC  +V TYNT
Sbjct: 144 VDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNT 203

Query: 61  LINGYCKTKD-----------------------------------VEESLNLYSEMLSKG 85
           +ING CK  +                                   V E+L+++S M +KG
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG 263

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY----- 140
           I P + TY +L  GL +  + + A  L +EM   ++  +  T+N  +D  CK G      
Sbjct: 264 ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAL 323

Query: 141 ------------------------------IVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
                                         +VEA +LF  +    C+  I +Y+ LI+G 
Sbjct: 324 GVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGY 383

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK  +++ A +LF  +   GL PN V+YN +IHGFC  G++ +A DLF +M   G  P+ 
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDL 443

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDE 258
            T++ L+ G  +     K   L   M  
Sbjct: 444 FTYSILLDGFCKQGYLGKAFRLFRAMQS 471



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 131/242 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ PN +  S  ++ FC    +D    +   +   G    +VT+ TLING CK  +  ++
Sbjct: 123 GLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQA 182

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L+ +M++KG +P V TYNT+ +GL +I +   A  L  +M+ +       TY+T ID 
Sbjct: 183 VELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDS 242

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC++  + EA ++F  ++       I  Y+ LI GLCK  + + A  L   +  + +MP+
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +VT+N+++  FC +G++ +A  +   M   GV PN VT+++LM G     +  +  +L H
Sbjct: 303 IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFH 362

Query: 255 RM 256
            M
Sbjct: 363 VM 364



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 121/223 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L  +MI +G +PN F Y+ LI+G+C    ID A +LF  M   G   N V+YNTLI
Sbjct: 356 EARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLI 415

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C+   + E+ +L+  M + G  P + TY+ L  G  +   +  A +LF  MQ + + 
Sbjct: 416 HGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLK 475

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                Y   +  +CK+G   +A +LF  L V   +  ++ Y+ +I+GLCK G L+ A E 
Sbjct: 476 PNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEA 535

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           F+++   G  P+ ++YN++I G        +A  L  +M  +G
Sbjct: 536 FRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI-DRARELFVSMDINGCMHNVVTYN 59
           +D+A    + M+ R   P    ++ L+      G+  D    L   M++ G   N+ T +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
             +N +C+ + V+   ++ ++++  G++PT+VT+ TL +GL ++ +   A++LFD+M   
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TYNT I+GLCK G    AA L + +    C+  +  YS LID LC+   +  A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++F  +   G+ P++ TY  +I G C   +  +A  L  +M +  + P+ VTFN L+  
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  + S+ + +L  M E
Sbjct: 313 FCKEGKVSEALGVLKTMTE 331



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 62/124 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL   M    ++PN  +Y+ L+   C +G    AR+LF  + + G   +V  Y T
Sbjct: 459 LGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTT 518

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   ++E+L  +  M + G  P  ++YN +  GL +      AL L  EM+   
Sbjct: 519 IINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578

Query: 121 VAAE 124
             A+
Sbjct: 579 FIAD 582


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 138/226 (61%), Gaps = 3/226 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L + M +R V P+ F Y++LI+G C+ G +D A+++   M   GC+ +VVTYNTLI
Sbjct: 203 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 262

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK+K V+E   L+ EM  +G+    +TYNT+  G F+  + + A ++F  M   D  
Sbjct: 263 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSR 319

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  + GLC N  + +A  LF  ++  + EL I  Y+ +I G+CKIG +E AW+L
Sbjct: 320 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 379

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           F+SL   GL P+VV+Y  MI GFC   Q DK+  L+  M+  G+ P
Sbjct: 380 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 138/256 (53%), Gaps = 3/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+RL+  M+ R + PN   ++ +ID F   G+   A +L+  M       +V TYN+LI
Sbjct: 168 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 227

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C    V+E+  +   M++KG  P VVTYNTL +G  +  +V+   KLF EM    + 
Sbjct: 228 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TYNT I G  + G    A E+F  +        I  YS L+ GLC   ++E A  L
Sbjct: 288 GDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVL 344

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+++ +  +  ++ TYNI+IHG C  G ++ A DLF  +  KG+ P+ V++ T++ G  R
Sbjct: 345 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 404

Query: 243 NNETSKVVELLHRMDE 258
             +  K   L  +M E
Sbjct: 405 KRQWDKSDLLYRKMQE 420



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 140/256 (54%), Gaps = 3/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+  M + G RP+  +Y+T+IDG C  G ++ A ELF  M+ +G   + VTYN+L+
Sbjct: 98  DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 157

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C +    ++  L  +M+ + I P V+T+  +     +  +   A+KL++EM    V 
Sbjct: 158 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 217

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN+ I+GLC +G + EA ++   +    C   +  Y+ LI+G CK  +++   +L
Sbjct: 218 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 277

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ + + GL+ + +TYN +I G+   G+ D A ++F  M+++   PN  T++ L+ G   
Sbjct: 278 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 334

Query: 243 NNETSKVVELLHRMDE 258
           N    K + L   M +
Sbjct: 335 NWRVEKALVLFENMQK 350



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 131/249 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G  P+    S+LI+GFC    +  A +L   M+  G   +VV YNT+I+G CK   
Sbjct: 71  MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 130

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V +++ L+  M   G+R   VTYN+L  GL    +   A +L  +M   D+     T+  
Sbjct: 131 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 190

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID   K G   EA +L+  +     +  +  Y+ LI+GLC  G+++ A ++   +   G
Sbjct: 191 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 250

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +P+VVTYN +I+GFC   ++D+   LF +M  +G+  + +T+NT++ G  +        
Sbjct: 251 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 310

Query: 251 ELLHRMDER 259
           E+  RMD R
Sbjct: 311 EIFSRMDSR 319



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 133/245 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + Y+ +I+  C       A  +   M   G   +VVT ++LING+C+   V ++
Sbjct: 40  GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 99

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L S+M   G RP VV YNT+  G  +I  V  A++LFD M+   V A+  TYN+ + G
Sbjct: 100 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 159

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC +G   +AA L R + +      +  ++ +ID   K GK   A +L++ + R  + P+
Sbjct: 160 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 219

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYN +I+G C  G++D+A  +   M  KG  P+ VT+NTL+ G  ++    +  +L  
Sbjct: 220 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 279

Query: 255 RMDER 259
            M +R
Sbjct: 280 EMAQR 284



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 35/249 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MIQ    P+   +S ++     +   D    LF  M++ G  H++ +YN +IN  C+   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
              +L++  +M+  G  P VVT ++L                                  
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSL---------------------------------- 86

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+G C+   + +A +L   +  +     +  Y+ +IDG CKIG +  A ELF  + R G
Sbjct: 87  -INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 145

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           +  + VTYN ++ G C  G+   A  L  DM  + + PN +TF  ++   ++  + S+ +
Sbjct: 146 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 205

Query: 251 ELLHRMDER 259
           +L   M  R
Sbjct: 206 KLYEEMTRR 214



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 83/173 (47%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P++V ++ +   + +    +  + LF  M+   +  +  +YN  I+ LC+    V A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              +     E  +   S LI+G C+  ++  A +L   +  +G  P+VV YN +I G C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G ++ A +LF  ME  GV  + VT+N+L+ G   +   S    L+  M  R+
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 50/88 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + M +  +  +   Y+ +I G C  G ++ A +LF S+   G   +VV+Y T
Sbjct: 338 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRP 88
           +I+G+C+ +  ++S  LY +M   G+ P
Sbjct: 398 MISGFCRKRQWDKSDLLYRKMQEDGLLP 425


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  187 bits (474), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 151/259 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E   + D+M+++G++PN   Y++L+DG+CL  E+++A+ +F +M   G   ++ +Y+ 
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK K  +E++NL+ EM  K I P VVTY++L  GL +  ++ +AL+L D+M    
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN+ +D LCK   + +A  L   L+    +  +  YS LI GLC+ GKLE A 
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ L   G   NV TY IMI GFC +G  ++A  L   ME  G  P+  T+  ++L  
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550

Query: 241 IRNNETSKVVELLHRMDER 259
            + +E     +LL  M  R
Sbjct: 551 FKKDENDMAEKLLREMIAR 569



 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 147/259 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A    D ++  G   +   Y TLI G C  GE   A +L   +D N    NVV YNT
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK K V E+ +L+SEM+SKGI P VVTY+ L  G   + ++  A+ LF++M   +
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  ++  CK+G + E   +F  +     +     Y+ L+DG C + ++  A 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++ + G+ P++ +Y+IMI+GFC   + D+A +LF +M  K + P+ VT+++L+ G 
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   S  ++L+ +M +R
Sbjct: 411 SKSGRISYALQLVDQMHDR 429



 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 129/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   MI +G+ P+   YS LI GFC+ G+++ A +LF  M +     +V T+N 
Sbjct: 241 VNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNI 300

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N +CK   ++E   ++  M+ +GI+P  VTYN+L  G   + +V  A  +F+ M    
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +Y+  I+G CK     EA  LF+ +        +  YS LIDGL K G++  A 
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G+ P + TYN ++   C   Q+DKA  L   ++ KG+ PN  T++ L+ G
Sbjct: 421 QLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 136/244 (55%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+PN  +Y+T+ID  C    ++ A +LF  M   G   +VVTY+ LI+G+C    + +++
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           +L+++M+ + I+P V T+N L +   +  +++    +FD M    +     TYN+ +DG 
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C    + +A  +F T+        I++YS +I+G CKI K + A  LF+ + R  ++P+V
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTY+ +I G    G++  A  L   M  +GV P   T+N+++    + ++  K + LL +
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTK 460

Query: 256 MDER 259
           + ++
Sbjct: 461 LKDK 464



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 128/245 (52%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           RG++PN    + LI+ FC  G I  A  +F  +   G + + +T+ TLI G C    +++
Sbjct: 114 RGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQ 173

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +   + ++++ G     ++Y TL HGL ++ +   AL L   +  + V      YNT ID
Sbjct: 174 AFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIID 233

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            +CK   + EA +LF  +        +  YS LI G C +GKL  A +LF  +    + P
Sbjct: 234 SMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKP 293

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +V T+NI+++ FC DG+M +   +F  M  +G+ PN VT+N+LM G     E +K   + 
Sbjct: 294 DVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353

Query: 254 HRMDE 258
           + M +
Sbjct: 354 NTMAQ 358



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 122/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + +++R   P AF ++ ++     +        L   M+  G   N+V  N 
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  + ++++++L  G  P  +T+ TL  GL    Q++ A    D++    
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y T I GLCK G    A +L + +     +  +  Y+ +ID +CK+  +  A+
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF  +   G+ P+VVTY+ +I GFC  G+++ A DLF  M  + + P+  TFN L+
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 94/196 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   M ++ + P+   YS+LIDG   +G I  A +L   M   G    + TYN++
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++  CK   V++++ L +++  KGI+P + TY+ L  GL +  ++E A K+F+ +     
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY   I G C  G   EA  L   +    C    + Y  +I  L K  + + A +
Sbjct: 502 NLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561

Query: 182 LFQSLPRVGLMPNVVT 197
           L + +   G+ P  + 
Sbjct: 562 LLREMIARGVRPRQIA 577



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 35/238 (14%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLS------------------------------ 83
           N ++Y++    +    DV+++++L++ +L                               
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 84  -----KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
                +GI+P +V  N L +   ++  +  A  +F ++       +T T+ T I GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G I +A      +  L       +Y  LI GLCK+G+   A +L Q +    + PNVV Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N +I   C    +++A DLF +M +KG++P+ VT++ L+ G     + +  ++L ++M
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  186 bits (473), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 150/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL +  G+ P A VYS L+DG+CL G++++A  +F +M   G   N V Y TL+
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ EML KGI+P+ + YN +  GLFE  +   A   F EM  S +A
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  + GL KN    EA  LF+ LR +  ++ I   + +I G+ +  ++E A +L
Sbjct: 637 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 696

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+ R GL+P VVTY+IMI     +G +++A D+F  M+  G  P+    N ++   ++
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756

Query: 243 NNETSKVVELLHRMDERN 260
            NE  +    L ++DERN
Sbjct: 757 KNEIVRAGAYLSKIDERN 774



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 140/256 (54%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M + G    P+   Y+T+IDGF   G++++A +LF  M   G   + VTY++
Sbjct: 200 QADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSS 259

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++     +M++KG+ P   TYN L +G     Q + A+++F EM+   
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 319

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  +  LCK G I EA ++F T+ +      + +Y+ +++G    G L    
Sbjct: 320 ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 379

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G+ P + T+N++I  + N G +DKA  +F +M   GV PN +T+ T++   
Sbjct: 380 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439

Query: 241 IRNNETSKVVELLHRM 256
            R  +    +E  ++M
Sbjct: 440 CRIGKMDDAMEKFNQM 455



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 139/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M  +G  P+ F Y+ +++G+   G +    +LF  M  +G    + T+N 
Sbjct: 340 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 399

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  Y     +++++ +++EM   G++P V+TY T+   L  I +++ A++ F++M    
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG 459

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +   Y+  I G C +G +++A EL   +      L I  +S +I+ LCK+G++  A 
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQ 519

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F     VGL P  V Y++++ G+C  G+M+KA  +F  M + G+ PN V + TL+ G 
Sbjct: 520 NIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + + L   M ++
Sbjct: 580 CKIGRIDEGLSLFREMLQK 598



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 124/253 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+QRG+ P+   YS+++   C    +D+A      M   G + N  TYN 
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY  T   +E++ ++ EM  + I P VVT+N L   L +  +++ A  +FD M    
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YN  ++G    G +V+  +LF  +        I  ++ LI      G L+ A 
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 414

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G+ PNV+TY  +I   C  G+MD A + F  M  +GVAP+   ++ L+ G 
Sbjct: 415 IIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474

Query: 241 IRNNETSKVVELL 253
             +    K  EL+
Sbjct: 475 CTHGSLLKAKELI 487



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 129/260 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M   GV+PN   Y+T+I   C  G++D A E F  M   G   +   Y+ 
Sbjct: 410 LDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    + ++  L SE+++ G+   +V ++++ + L ++ +V  A  +FD   +  
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y+  +DG C  G + +A  +F  +     E     Y  L++G CKIG+++   
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G+ P+ + YNI+I G    G+   A   F +M   G+A N  T++ ++ G 
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 649

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N    + + L   +   N
Sbjct: 650 FKNRCFDEAIFLFKELRAMN 669



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 38/265 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---------------------------- 42
           +++ G+R +  + + L+ GFC     D A ++                            
Sbjct: 137 LLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 196

Query: 43  -------FVSMDING---CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                   + M   G   C  +VV YNT+I+G+ K  DV ++ +L+ EM+ +GI P  VT
Sbjct: 197 KSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVT 256

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           Y+++ H L +   ++ A     +M +  V     TYN  I G    G   EA  +F+ +R
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                  +  ++ L+  LCK GK++ A ++F ++   G  P+V +YNIM++G+   G + 
Sbjct: 317 RQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV 376

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLM 237
              DLF  M   G+AP   TFN L+
Sbjct: 377 DMTDLFDLMLGDGIAPVICTFNVLI 401



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 3/227 (1%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           R + P +  Y+ L+D        + A   F  +   G   +++  N L+ G+C+ K  +E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 164

Query: 74  SLN-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV--AAETSTYNT 130
           +L+ L       G  P V +Y+ L   L +  +   A  L   M       + +   YNT
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNT 224

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG  K G + +A +LF+ +           YS ++  LCK   ++ A    + +   G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++PN  TYN +I+G+ + GQ  +A  +F +M  + + P+ VTFN LM
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 84/157 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+Q+G++P+  +Y+ +IDG    G    A+  F  M  +G   N  TY+ 
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 644

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S 
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 704

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +     TY+  I  L K G + EA ++F +++   CE
Sbjct: 705 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 46/236 (19%)

Query: 32  LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG-----I 86
           L  E+ R     +  D+NG +  +    +  +  C++     ++ L++   S+      +
Sbjct: 51  LLDELQRRGTPVLERDLNGFLAAIARAPS--SAACRSGPAL-AVALFNRAASRAQGPRVL 107

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            PT  TY  L       H+ E AL  F ++  + +  +    N  + G C+     EA +
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 167

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +                                  L    P +G +P+V +Y+I++   C
Sbjct: 168 I----------------------------------LLHRTPELGCVPDVFSYSILLKSLC 193

Query: 207 NDGQMDKAHDLFLDMEAKGVA---PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + G+  +A DL L M A+G A   P+ V +NT++ G  +  + +K  +L   M +R
Sbjct: 194 DQGKSGQADDL-LRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 248



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 17/167 (10%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGL--------CKNGYIV------EAAELFRTLR 152
           E A  L DE+Q           N F+  +        C++G  +       AA   +  R
Sbjct: 46  EEAHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPALAVALFNRAASRAQGPR 105

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           VL        Y+ L+D   +  + E A   F  L R GL  +++  N ++ GFC   + D
Sbjct: 106 VLSPT--SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTD 163

Query: 213 KAHDLFLDMEAK-GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +A D+ L    + G  P+  +++ L+       ++ +  +LL  M E
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE 210


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  186 bits (473), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 154/266 (57%), Gaps = 8/266 (3%)

Query: 3   EASRLLDL----MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           E +R L++    M + GV P    Y+T+I+G C + E+    ELF  +   G   +VVTY
Sbjct: 195 ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTY 254

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-- 116
           NTLI+  CK  D+EE+  L+ +M S+   P VVTY+ L +GL ++ +++ A +L  EM  
Sbjct: 255 NTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR 314

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGLCKIG 174
           +  DV     TYN+F+DGLCK     EA EL R+LR   L+       +S LIDGLCK G
Sbjct: 315 KSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 374

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +++ A  +F  +   G +PNV+TYN +++G C   +M++AH +   M  KGV P+ +T++
Sbjct: 375 QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 434

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+    + +   + +ELLH M  R 
Sbjct: 435 VLVDAFCKASRVDEALELLHGMASRG 460



 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/266 (36%), Positives = 154/266 (57%), Gaps = 7/266 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +L+  +   G  P+   Y+ L+DG   +G+ ++A  +   M   G   +VVTYNTL
Sbjct: 689 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTL 748

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIR---PTVVTYNTLFHGLFEIHQVEHALKLFDEM-- 116
           I+  CK  D+EE+  L+ +M S+  R   P VVTY+ L +GL ++ +++ A +L  EM  
Sbjct: 749 IDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMR 808

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGLCKIG 174
           +  DV     TYN+F+DGLCK   + EA EL R+LR   L+       +S LIDGLCK G
Sbjct: 809 KSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 868

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           + + A  +F  +   G +PNVVTYN++++G C   +M++AH +   M  KGV P+ +T++
Sbjct: 869 QTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYS 928

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+    + +   + +ELLH M  R 
Sbjct: 929 VLVDAFCKASHVDEALELLHGMASRG 954



 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 131/265 (49%), Gaps = 5/265 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC--MHNVVTY 58
           ++EA RL   M  R   PN   YS LI+G C  G ID AREL   M    C  + N++TY
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           N+ ++G CK     E+  L   +    +R  P  VT++TL  GL +  Q++ A  +FD+M
Sbjct: 327 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 386

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                     TYN  ++GLCK   +  A  +  ++        +  YS L+D  CK  ++
Sbjct: 387 IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 446

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNT 235
           + A EL   +   G  PNVVT+N +I G C   +  +A  +F DM  K G+ P+ +T+ T
Sbjct: 447 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCT 506

Query: 236 LMLGCIRNNETSKVVELLHRMDERN 260
           L+ G  R     +   LL  M + +
Sbjct: 507 LIDGLFRTGRAGQAEALLDAMPDPD 531



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 140/257 (54%), Gaps = 5/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + D MI  G  PN   Y+ L++G C   +++RA  +  SM   G   +V+TY+ 
Sbjct: 376 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HS 119
           L++ +CK   V+E+L L   M S+G  P VVT+N++  GL +  +   A ++FD+M    
Sbjct: 436 LVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKH 495

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TY T IDGL + G   +A  L   +     +    A++C I+GL K+G +  A
Sbjct: 496 GLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRA 551

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++  +  + L+P+ VT+NI+I G C  G  ++A  LF +M AK + P+ +TF  L+ G
Sbjct: 552 LQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG 611

Query: 240 CIRNNETSKVVELLHRM 256
             +  +     ++L  M
Sbjct: 612 LCKAGQVEAARDILDLM 628



 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 139/254 (54%), Gaps = 10/254 (3%)

Query: 2    DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            DEA  + D MI  G  PN   Y+ L++G C T +++RA  +  SM   G   +V+TY+ L
Sbjct: 871  DEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVL 930

Query: 62   INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--QHS 119
            ++ +CK   V+E+L L   M S+G  P VVT+N++  GL +  Q   A ++FD+M  +H 
Sbjct: 931  VDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHG 990

Query: 120  DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             +A +  TY T IDGL + G+  +A  L   +     +    A++C I+GL K+G +  A
Sbjct: 991  -LAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRA 1045

Query: 180  WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                  L    L+P+ VT+NI+I G C  G  ++A  LF +M AK + P+ +TF  L+ G
Sbjct: 1046 LHRMLELE---LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG 1102

Query: 240  CIRNNETSKVVELL 253
              +  +     +++
Sbjct: 1103 LCKAGQVEATWDIM 1116



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 126/248 (50%), Gaps = 4/248 (1%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D+ ++ G+ P+   Y TLIDG   TG   +A  L  +M       +   +N  ING  K 
Sbjct: 490 DMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKL 545

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
            DV  +L +Y+ ML   + P  VT+N L  G  +    E A  LF+EM   ++  +  T+
Sbjct: 546 GDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 605

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              IDGLCK G +  A ++   +  L     +  Y+ L+ GLCK G++E A +  + +  
Sbjct: 606 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS 665

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G +P+ +TY  +++  C   + D A  L  ++++ G  P+ VT+N L+ G  ++ +T +
Sbjct: 666 SGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQ 725

Query: 249 VVELLHRM 256
            + +L  M
Sbjct: 726 AITVLEEM 733



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 43/285 (15%)

Query: 17  RPNAFVYSTLIDG-FCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           RPN F YSTL+   +   G+++R    F  +  +    +V  YN ++   C+  +   +L
Sbjct: 143 RPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSS--SRSVADYNIVLQSLCRAGETARAL 200

Query: 76  NLY-SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
            ++  EM   G+ PT+VTYNT+ +GL + +++   ++LF+E+       +  TYNT ID 
Sbjct: 201 EIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDS 260

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG--LM 192
           LCK G + EA  L   +    C   +  YS LI+GLCK+G+++ A EL Q + R    ++
Sbjct: 261 LCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 320

Query: 193 PNVVTYN-------------------------------------IMIHGFCNDGQMDKAH 215
           PN++TYN                                      +I G C  GQ+D+A 
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 380

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +F DM A G  PN +T+N L+ G  + ++  +   ++  M ++ 
Sbjct: 381 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 131/259 (50%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A ++ + M++  + P+   ++ LI G C  G  ++A  LF  M       +V+T+  
Sbjct: 548 VSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   VE + ++   M + G+ P VVTYN L HGL +  ++E A +  +EM  S 
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              ++ TY + +  LC+     +A +L   L+    +     Y+ L+DGL K G+ E A 
Sbjct: 668 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME---AKGVAPNCVTFNTLM 237
            + + +   G  P+VVTYN +I   C  G +++A  L  DM    ++   PN VT++ L+
Sbjct: 728 TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLI 787

Query: 238 LGCIRNNETSKVVELLHRM 256
            G  +     +  EL+  M
Sbjct: 788 NGLCKVGRIDEARELIQEM 806



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            M+ A  +++ M+ +GV P+   YS L+D FC    +D A EL   M   GC  NVVT+N+
Sbjct: 905  MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNS 964

Query: 61   LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +I+G CK+    E+  ++ +M L  G+ P  +TY TL  GLF       A  L D M   
Sbjct: 965  IIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDP 1024

Query: 120  DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLE 177
            D    T  +N  I+GL K G +  A       R+L+ EL  +   ++ LI G CK G  E
Sbjct: 1025 D----TYAFNCCINGLSKLGDVSRALH-----RMLELELVPDKVTFNILIAGACKAGNFE 1075

Query: 178  TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
             A  LF+ +    L P+V+T+  +I G C  GQ++   D+ 
Sbjct: 1076 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 4/215 (1%)

Query: 48  INGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QV 106
           + G  H + ++N  +N   K+    ++++L+   L    RP   TY+TL    ++    V
Sbjct: 104 LPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDV 163

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR-TLRVLKCELGIEAYSC 165
           E  L  F   +    +   + YN  +  LC+ G    A E+FR  +        I  Y+ 
Sbjct: 164 ERTLGFF--RRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNT 221

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +I+GLCK  +L    ELF+ L   G  P+VVTYN +I   C  G +++A  L  DM ++ 
Sbjct: 222 IINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRS 281

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             PN VT++ L+ G  +     +  EL+  M  ++
Sbjct: 282 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 316


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  186 bits (473), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL +  G+ P+A VY+ L+DG+CL G++++A  +F +M   G   NVV Y TL+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ EML KGI+P+ + YN +  GLFE  +   A   F EM  S +A
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  + GL KN    EA  LF+ LR +  ++ I   + +I G+ +  ++E A +L
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+ R GL+P  VTY+IMI     +G +++A D+F  M+  G  P+    N ++   ++
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758

Query: 243 NNETSKVVELLHRMDERN 260
            NE  +    L ++DERN
Sbjct: 759 KNEIVRAGAYLSKIDERN 776



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 141/256 (55%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M + G    P+   Y+T+IDGF   G++++A +LF  M   G   ++VTY++
Sbjct: 202 QADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 261

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++     +M++KG+ P   TYN L +G     Q + A+++F EM+   
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +    NT +  LCK G I EA ++F T+ +      + +Y+ +++G    G L    
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G+ P++ T+N++I  + N G +DKA  +F +M   GV P+ VT+ T++   
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441

Query: 241 IRNNETSKVVELLHRM 256
            R  +    +E  ++M
Sbjct: 442 CRIGKMDDAMEKFNQM 457



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 139/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M  +G  P+ F Y+ +++G+   G +    +LF  M  +G   ++ T+N 
Sbjct: 342 IKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNV 401

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  Y     +++++ +++EM   G++P VVTY T+   L  I +++ A++ F++M    
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   Y+  I G C +G +++A EL   +      L I  +  +I+ LCK+G++  A 
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F     VGL P+ V YN+++ G+C  G+M+KA  +F  M + G+ PN V + TL+ G 
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + + L   M ++
Sbjct: 582 CKIGRIDEGLSLFREMLQK 600



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 131/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M   GV+P+   Y T+I   C  G++D A E F  M   G + +   Y+ 
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    + ++  L SE+++ G+R  +V + ++ + L ++ +V  A  +FD   +  
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  +DG C  G + +A  +F  +     E  +  Y  L++G CKIG+++   
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G+ P+ + YNI+I G    G+   A   F +M   G+A N  T++ ++ G 
Sbjct: 592 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 651

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N    + + L   +   N
Sbjct: 652 FKNRCFDEAIFLFKELRAMN 671



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 38/265 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---------------------------- 42
           +++ G+R +A + S L+ GFC     D A ++                            
Sbjct: 139 LLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQG 198

Query: 43  -------FVSMDING---CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                   + M   G   C  +VV YNT+I+G+ K  DV ++ +L+ EM+ +GI P +VT
Sbjct: 199 KSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 258

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           Y+++ H L +   ++ A     +M +  V  +  TYN  I G    G   EA  +F+ +R
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 318

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                  + A + L+  LCK GK++ A ++F ++   G  P+V +Y IM++G+   G + 
Sbjct: 319 RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLV 378

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLM 237
              DLF  M   G+AP+  TFN L+
Sbjct: 379 DMTDLFDLMLGDGIAPDIYTFNVLI 403



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 122/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+QRG+ P+   YS+++   C    +D+A      M   G + +  TYN 
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY  T   +E++ ++ EM  + I P VV  NTL   L +  +++ A  +FD M    
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y   ++G    G +V+  +LF  +        I  ++ LI      G L+ A 
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 416

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G+ P+VVTY  +I   C  G+MD A + F  M  +GV P+   ++ L+ G 
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 241 IRNNETSKVVELLHRM 256
             +    K  EL+  +
Sbjct: 477 CTHGSLLKAKELISEI 492



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 3/227 (1%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           R + P ++ Y+ L+D        + A   F  +   G   + +  + L+ G+C+ K  +E
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 74  SLN-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV--AAETSTYNT 130
           +L+ L       G  P V +YN L   L    +   A  L   M       + +   YNT
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG  K G + +A +LF+ +        +  YS ++  LCK   ++ A    + +   G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++P+  TYN +I+G+ + GQ  +A  +F +M  + + P+ V  NTLM
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 84/157 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+Q+G++P+  +Y+ +IDG    G    A+  F  M  +G   N  TY+ 
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S 
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 706

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +     TY+  I  L K G + EA ++F +++   CE
Sbjct: 707 LVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCE 743



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 12/161 (7%)

Query: 109 ALKLFDEM----QHSDVAAETS-TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           A+ LF+      Q   V + TS TY   +D  C   +  E A  F   ++L+  L ++A 
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMD-CCTRAHRPELALAFFG-QLLRTGLRVDAI 149

Query: 164 --SCLIDGLCKIGKLETAWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             S L+ G C+  + + A + L    P +G +P+V +YNI++   CN G+  +A DL   
Sbjct: 150 IASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRM 209

Query: 221 MEAKGV--APNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           M   G   +P+ V +NT++ G  +  + +K  +L   M +R
Sbjct: 210 MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 250


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  186 bits (473), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL +  G+ P+A VY+ L+DG+CL G++++A  +F +M   G   NVV Y TL+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ EML KGI+P+ + YN +  GLFE  +   A   F EM  S +A
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  + GL KN    EA  LF+ LR +  ++ I   + +I G+ +  ++E A +L
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+ R GL+P  VTY+IMI     +G +++A D+F  M+  G  P+    N ++   ++
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758

Query: 243 NNETSKVVELLHRMDERN 260
            NE  +    L ++DERN
Sbjct: 759 KNEIVRAGAYLSKIDERN 776



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 140/256 (54%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M + G    P+   Y+T+IDGF   G++++A +LF  M   G   ++VTY++
Sbjct: 202 QADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 261

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++     +M++KG+ P   TYN L +G     Q + A+++F EM+   
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +    NT +  LCK G I EA ++F T+ +      + +Y+ +++G    G L    
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMT 381

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G+ P + T+N++I  + N G +DKA  +F +M   GV P+ VT+ T++   
Sbjct: 382 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441

Query: 241 IRNNETSKVVELLHRM 256
            R  +    +E  ++M
Sbjct: 442 CRIGKMDDAMEKFNQM 457



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M  +G  P+ F Y+ +++G+   G +    +LF  M  +G    + T+N 
Sbjct: 342 IKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 401

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  Y     +++++ +++EM   G++P VVTY T+   L  I +++ A++ F++M    
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   Y+  I G C +G +++A EL   +      L I  +  +I+ LCK+G++  A 
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F     VGL P+ V YN+++ G+C  G+M+KA  +F  M + G+ PN V + TL+ G 
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + + L   M ++
Sbjct: 582 CKIGRIDEGLSLFREMLQK 600



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 131/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M   GV+P+   Y T+I   C  G++D A E F  M   G + +   Y+ 
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    + ++  L SE+++ G+R  +V + ++ + L ++ +V  A  +FD   +  
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  +DG C  G + +A  +F  +     E  +  Y  L++G CKIG+++   
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G+ P+ + YNI+I G    G+   A   F +M   G+A N  T++ ++ G 
Sbjct: 592 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 651

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N    + + L   +   N
Sbjct: 652 FKNRCFDEAIFLFKELRAMN 671



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 125/265 (47%), Gaps = 38/265 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---------------------------- 42
           +++ G+R +A + S L+ GFC     D A ++                            
Sbjct: 139 LLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQG 198

Query: 43  -------FVSMDING---CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                   + M   G   C  +VV YNT+I+G+ K  DV ++ +L+ EM+ +GI P +VT
Sbjct: 199 KSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVT 258

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           Y+++ H L +   ++ A     +M +  V  +  TYN  I G    G   EA  +F+ +R
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 318

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                  + A + L+  LCK GK++ A ++F ++   G  P+V +Y IM++G+   G + 
Sbjct: 319 RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLV 378

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLM 237
              DLF  M   G+AP   TFN L+
Sbjct: 379 DMTDLFDLMLGDGIAPVICTFNVLI 403



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 122/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+QRG+ P+   YS+++   C    +D+A      M   G + +  TYN 
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY  T   +E++ ++ EM  + I P VV  NTL   L +  +++ A  +FD M    
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y   ++G    G +V+  +LF  +        I  ++ LI      G L+ A 
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 416

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G+ P+VVTY  +I   C  G+MD A + F  M  +GV P+   ++ L+ G 
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 241 IRNNETSKVVELLHRM 256
             +    K  EL+  +
Sbjct: 477 CTHGSLLKAKELISEI 492



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 3/227 (1%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           R + P ++ Y+ L+D        + A   F  +   G   + +  + L+ G+C+ K  +E
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 74  SLN-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV--AAETSTYNT 130
           +L+ L       G  P V +YN L   L    +   A  L   M       + +   YNT
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG  K G + +A +LF+ +        +  YS ++  LCK   ++ A    + +   G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++P+  TYN +I+G+ + GQ  +A  +F +M  + + P+ V  NTLM
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 84/157 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+Q+G++P+  +Y+ +IDG    G    A+  F  M  +G   N  TY+ 
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S 
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 706

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +     TY+  I  L K G + EA ++F +++   CE
Sbjct: 707 LVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 743



 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 12/161 (7%)

Query: 109 ALKLFDEM----QHSDVAAETS-TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           A+ LF+      Q   V + TS TY   +D  C   +  E A  F   ++L+  L ++A 
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMD-CCTRAHRPELALAFFG-QLLRTGLRVDAI 149

Query: 164 --SCLIDGLCKIGKLETAWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             S L+ G C+  + + A + L    P +G +P+V +YNI++   CN G+  +A DL   
Sbjct: 150 IASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRM 209

Query: 221 MEAKGV--APNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           M   G   +P+ V +NT++ G  +  + +K  +L   M +R
Sbjct: 210 MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 250


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  186 bits (472), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 154/258 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL+DLM++  VRP+   Y+TL+DG CLTG ID A +L   M   G   +  TYNTL+
Sbjct: 465 EAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLL 524

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK + ++++ +L+ EML KG+ P VVTYNT+ HGLF+I +   A +L+  M ++   
Sbjct: 525 HGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRK 584

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   ++GLC+N ++ EA ++F++L     +L I   + +I  L K G+ E A +L
Sbjct: 585 CDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDL 644

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P+V TY ++      +G +++  +LF  ME  G APN    N L+   + 
Sbjct: 645 FATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLH 704

Query: 243 NNETSKVVELLHRMDERN 260
             +  +    L ++DE+N
Sbjct: 705 RGDIGRAGVYLSKLDEKN 722



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 132/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E    LDLM++ GV P+  +++ + + +     ID A  +F  M        VV Y  
Sbjct: 323 LSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGA 382

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V++++  +++M+++G+ P +  +++L +GL  + + E A KLF E+    
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG 442

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    + +N  +  LC+ G ++EA  L   +  +     + +Y+ L+DG C  G+++ A 
Sbjct: 443 IRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +  +GL P+  TYN ++HG+C   ++D A+ LF +M  KG+ P  VT+NT++ G
Sbjct: 503 KLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHG 561



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   MI +GVRPN   Y+ LI G+  TG+     ++   M  +G   + V Y  
Sbjct: 218 VDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAV 277

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK     E+ N++  ++ KGI+P V  Y  L HG      +       D M  + 
Sbjct: 278 LLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNG 337

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+ +   +N   +   K   I EA  +F  +R      G+  Y  LID LCK+G+++ A 
Sbjct: 338 VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAV 397

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +   G+ P++  ++ +++G C   + +KA  LF ++  +G+  N   FN LM   
Sbjct: 398 LKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNL 457

Query: 241 IRNN---ETSKVVELLHRMDER 259
            R     E  ++++L+ R+D R
Sbjct: 458 CREGRVMEAQRLIDLMLRVDVR 479



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  GV P+ FV+S+L+ G C   + ++A +LF  +   G   N   +N 
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNI 452

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVV----------------------------- 91
           L+   C+   V E+  L   ML   +RP V+                             
Sbjct: 453 LMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIG 512

Query: 92  ------TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                 TYNTL HG  +  +++ A  LF EM    +     TYNT + GL + G   EA 
Sbjct: 513 LKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAK 572

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EL+  +   + +  I  Y+ +++GLC+   ++ A+++FQSL    L  ++ T NIMI   
Sbjct: 573 ELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGAL 632

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
              G+ + A DLF  + A G+ P+  T+  +    I+     ++ EL   M+E
Sbjct: 633 LKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEE 685



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 6/246 (2%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           N  ++  L+ G C    +D A ++ +  M   GC  NV++YN L+ G C  K  EE+L L
Sbjct: 127 NTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALEL 186

Query: 78  YSEMLSKGI---RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
              M   G     P VVTY T+  GL +   V+ A  +F  M    V     TY   I G
Sbjct: 187 MHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
               G   E  ++ + +     +     Y+ L+D LCK G+   A  +F SL R G+ P+
Sbjct: 247 YLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPH 306

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           V  Y I++HG+  +G + + H  FLD+  + GV+P+   FN +     +     + + + 
Sbjct: 307 VTIYGILLHGYATEGALSEMHS-FLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIF 365

Query: 254 HRMDER 259
            +M ++
Sbjct: 366 DKMRQQ 371



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 127/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + D +I++G++P+  +Y  L+ G+   G +         M  NG   +   +N + 
Sbjct: 290 EARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMF 349

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N Y K   ++E+++++ +M  + + P VV Y  L   L ++ +V+ A+  F++M +  V 
Sbjct: 350 NAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVT 409

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   +++ + GLC      +A +LF  +      L    ++ L+  LC+ G++  A  L
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRL 469

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + RV + P+V++YN ++ G C  G++D+A  L   M + G+ P+  T+NTL+ G  +
Sbjct: 470 IDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCK 529

Query: 243 NNETSKVVELLHRM 256
                    L   M
Sbjct: 530 ARRIDDAYSLFREM 543



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 118/237 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA++LLD+M+  G++P+ F Y+TL+ G+C    ID A  LF  M + G    VVTYNT
Sbjct: 498 IDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNT 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G  +     E+  LY  M++   +  + TY  + +GL   + V+ A K+F  +   D
Sbjct: 558 ILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKD 617

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T N  I  L K G   +A +LF T+        +E Y  + + L K G LE   
Sbjct: 618 LQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELD 677

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ELF ++   G  PN    N ++    + G + +A      ++ K  +    T + L+
Sbjct: 678 ELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 5/229 (2%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELF-VSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           V P++  Y+ LI  FC  G +      F + +     ++N V +  L+ G C  K V+E+
Sbjct: 88  VAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEA 147

Query: 75  LN-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS---TYNT 130
            + L   M   G    V++YN L  GL    + E AL+L   M      + T    TY T
Sbjct: 148 TDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTT 207

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGLCK   +  A  +F+ +           Y+CLI G    GK +   ++ Q +   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG 267

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L P+ V Y +++   C +G+  +A ++F  +  KG+ P+   +  L+ G
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHG 316



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 94/232 (40%), Gaps = 46/232 (19%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH---QVEHALKLFDEMQHS---DVAAE 124
           ++++L L+ EML+     +V T+N L   +         E  + LF+ M       VA  
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 125 TSTYNTFI------------------------------------DGLCKNGYIVEAAE-L 147
           + TY   I                                     GLC    + EA + L
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG---LMPNVVTYNIMIHG 204
            R +    C L + +Y+ L+ GLC   + E A EL   +   G     PNVVTY  +I G
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            C    +D+A  +F  M  KGV PN  T+  L+ G +   +  +VV++L  M
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEM 263


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 150/256 (58%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M + GV P+   Y++L+ G+ +  E+  AR+LF  M   GC  +V +Y+ LIN
Sbjct: 204 AEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILIN 263

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK K ++E+  L++EM+ +G  P  V+YNTL HGL ++ ++  A  LF  M  +    
Sbjct: 264 GYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLP 323

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   +DG CK GY+ +A  LFR ++    +  +  Y+ L++ +CK G L+ A ELF
Sbjct: 324 NLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELF 383

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             L  +GL PNV  Y  +I+G C +G +D+A + F +ME  G  P+  ++N ++ G +++
Sbjct: 384 SELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQH 443

Query: 244 NETSKVVELLHRMDER 259
            + S+ V L+  M +R
Sbjct: 444 KDESRAVHLIGEMRDR 459



 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 142/291 (48%), Gaps = 35/291 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M+ RG +P+ + Y+T+I+G C  GE   A  LF  M+  GC  NVVTY+TLI
Sbjct: 63  QAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLI 122

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+L+++S M +K I PT+ TY +L  GL    + + A  L +EM   ++ 
Sbjct: 123 HSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIM 182

Query: 123 AETSTYNTFIDGLCKNGY-----------------------------------IVEAAEL 147
               T+N  +D  CK G                                    +VEA +L
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL 242

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +    C+  + +YS LI+G CK  +++ A +LF  +   G  PN V+YN +IHG C 
Sbjct: 243 FDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            G++ +A DLF +M   G  PN  T+  L+ G  +     K   L   M  
Sbjct: 303 LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 125/223 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D+MI +G +P+ F YS LI+G+C    ID A++LF  M   G   N V+YNTLI
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+ +L+  M + G  P + TY  L  G  +   +  A +LF  MQ + + 
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  ++ +CK+G + +A ELF  L V+  +  ++ Y+ +I+GLCK G L+ A E 
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEA 417

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           F+++   G  P+  +YN++I GF       +A  L  +M  +G
Sbjct: 418 FRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 128/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +   M  + + P  F Y++LI G C       A  L   M     M NVVT+N 
Sbjct: 131 VNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNV 190

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +CK   V  +  +   M   G+ P VVTYN+L +G     +V  A KLFD M    
Sbjct: 191 LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG 250

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y+  I+G CK   I EA +LF  +          +Y+ LI GLC++G+L  A 
Sbjct: 251 CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQ 310

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+++   G +PN+ TY I++ GFC  G + KA  LF  M++  + PN V +N L+   
Sbjct: 311 DLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAM 370

Query: 241 IRNNETSKVVELLHRM 256
            ++       EL   +
Sbjct: 371 CKSGNLKDARELFSEL 386



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 129/245 (52%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I+ G++P    ++TLI+G    G+  +A ELF  M   GC  +  TY T+ING CK  + 
Sbjct: 37  IKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGET 96

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
             +  L+ +M   G +  VVTY+TL H L +  +V  AL +F  M+  D++    TY + 
Sbjct: 97  ALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSL 156

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I GLC      EA+ L   +  L     +  ++ L+D  CK GK+  A  + +++  +G+
Sbjct: 157 IQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            P+VVTYN +++G+    ++ +A  LF  M  KG  P+  +++ L+ G  +     +  +
Sbjct: 217 EPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQ 276

Query: 252 LLHRM 256
           L + M
Sbjct: 277 LFNEM 281



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 117/225 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ PN    + LI+ FC    +D    +       G    +VT+ TLING  K     ++
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L+ +M+++G +P   TY T+ +GL +I +   A  LF +M+ +       TY+T I  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK   + EA ++F  ++       I  Y+ LI GLC   + + A  L   +  + +MPN
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           VVT+N+++  FC +G++  A  +   M   GV P+ VT+N+LM G
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG 229



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 107/192 (55%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           M++ G   N  T N LIN +C+ + V+   ++ ++ +  G++PT+VT+ TL +GL ++ +
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
              A++LFD+M       +  TY T I+GLCK G    AA LF+ +    C+L +  YS 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI  LCK  ++  A ++F  +    + P + TY  +I G CN  +  +A  L  +M +  
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 226 VAPNCVTFNTLM 237
           + PN VTFN L+
Sbjct: 181 IMPNVVTFNVLV 192



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 93/170 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L + MI +G  PN   Y+TLI G C  G +  A++LF +M  NG + N+ TY  
Sbjct: 271 IDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAI 330

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   + ++  L+  M S  ++P +V YN L + + +   ++ A +LF E+    
Sbjct: 331 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG 390

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +      Y T I+GLCK G + EA E FR +    C     +Y+ +I G 
Sbjct: 391 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGF 440



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL   M    ++PN  +Y+ L++  C +G +  ARELF  + + G   NV  Y T
Sbjct: 341 LGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTT 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   ++E+L  +  M   G  P   +YN +  G  +      A+ L  EM+   
Sbjct: 401 IINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460

Query: 121 VAAETST 127
              +  T
Sbjct: 461 FITDAGT 467


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 149/259 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E   + D+M+++G++PN   Y++L+DG+CL  E+++A+ +F +M   G   ++ +Y+ 
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK K  +E++NL+ EM  K I P VVTY++L  GL +  ++ +AL+L D+M    
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN+ +D LCK   + +A  L    +    +  I  YS LI GLC+ GKLE A 
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ L   G   +V  Y IMI GFC +G  ++A  L   ME  G  P+  T+  ++L  
Sbjct: 491 KVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550

Query: 241 IRNNETSKVVELLHRMDER 259
            + +E     +LL  M  R
Sbjct: 551 FKKDENDMAEKLLREMIAR 569



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 148/259 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A    D ++  G   +   Y TLI G C  GE   A +L   +D N    NVV YNT
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK K V E+ +L+SEM+SKGI P VVTY+ L  G   + +++ A+ LF++M   +
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  ++  CK+G + E   +F  +     +     Y+ L+DG C + ++  A 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++ + G+ P++ +Y+IMI+GFC   + D+A +LF +M  K + P+ VT+++L+ G 
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   S  ++L+ +M +R
Sbjct: 411 SKSGRISYALQLVDQMHDR 429



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 127/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   M+ +G+ P+   YS LI GFC+ G++  A +LF  M +     +V T+N 
Sbjct: 241 VNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI 300

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N +CK   ++E   ++  M+ +GI+P  VTYN+L  G   + +V  A  +F+ M    
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +Y+  I+G CK     EA  LF+ +        +  YS LIDGL K G++  A 
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G+ PN+ TYN ++   C   Q+DKA  L    + KG  P+  T++ L+ G
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 137/244 (56%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+PN  +Y+T+ID  C    ++ A +LF  M   G   +VVTY+ LI+G+C    +++++
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           +L+++M+ + I+P V T+N L +   +  +++    +FD M    +     TYN+ +DG 
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C    + +A  +F T+        I++YS +I+G CKI K + A  LF+ + R  ++P+V
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTY+ +I G    G++  A  L   M  +GV PN  T+N+++    + ++  K + LL +
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTK 460

Query: 256 MDER 259
             ++
Sbjct: 461 FKDK 464



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 128/245 (52%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           RG++PN    + LI+ FC  G I  A  +F  +   G + + +T+ TL  G C    +++
Sbjct: 114 RGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQ 173

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +   + ++++ G     ++Y TL HGL ++ +   AL L   +  + V      YNT ID
Sbjct: 174 AFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIID 233

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            +CK   + EA +LF  +        +  YS LI G C +GKL+ A +LF  +    + P
Sbjct: 234 SMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKP 293

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +V T+NI+++ FC DG+M +   +F  M  +G+ PN VT+N+LM G     E +K   + 
Sbjct: 294 DVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353

Query: 254 HRMDE 258
           + M +
Sbjct: 354 NTMAQ 358



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 120/229 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + M Q GV P+   YS +I+GFC   + D A  LF  M     + +VVTY++
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K+  +  +L L  +M  +G+ P + TYN++   L + HQV+ A+ L  + +   
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + STY+  I GLC++G + +A ++F  L V    L + AY+ +I G C  G    A 
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L   +   G +P+  TY I+I       + D A  L  +M A+G+  N
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 121/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + +++R   P AF ++ ++     +        L   M+  G   N+V  N 
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  + ++++++L  G  P  +T+ TL  GL    Q++ A    D++    
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y T I GLCK G    A +L + +     +  +  Y+ +ID +CK+  +  A+
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF  +   G+ P+VVTY+ +I GFC  G++  A DLF  M  + + P+  TFN L+
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 35/238 (14%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLS------------------------------ 83
           N ++Y++    +    DV+++++L++ +L                               
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 84  -----KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
                +GI+P +V  N L +   ++  +  A  +F ++       +T T+ T   GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G I +A      +  L       +Y  LI GLCK+G+   A +L Q +    + PNVV Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N +I   C    +++A DLF +M +KG++P+ VT++ L+ G     +    ++L ++M
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 145/258 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   ++  GV P+   Y++LI G C+    D ARELF  M+  GC  + VTYN 
Sbjct: 26  LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK   +EE+ +L  +M+  G  P VVTYNT+  GL +  +VE AL LF+EM+   
Sbjct: 86  MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 ++NT I GLC+   I +A ++F  +          +Y  LIDGL K GKL  A+
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAY 205

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LFQ +   G+ P+ VTYN++IHG C    +D+A +LF  M +KG  P+  TFN L+   
Sbjct: 206 KLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +  +   LL RM +
Sbjct: 266 CKRGKLDEAFRLLKRMTD 283



 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 141/258 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M  +G RP+ F ++ LID  C  G++D A  L   M  +G + +VVTY+T
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    V+++ +L  +M+ +  +PTVVT NTL HGL +  +++ A ++ D M  S 
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYNT + G C+ G    A EL   +        +  Y+ L+ GLCK  +L  A 
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G  PN+ TY  +I GFC+ GQ+D    LF +M   G++P+ V + TL    
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475

Query: 241 IRNNETSKVVELLHRMDE 258
            ++  +++ +E+L    E
Sbjct: 476 CKSGRSARALEILREGRE 493



 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M  + + P+++ Y  LIDG    G+++ A +LF  M  +G   + VTYN 
Sbjct: 166 IDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNV 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C    ++E+L L+  M SKG RP+  T+N L     +  +++ A +L   M    
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY+T I GLC    + +A  L   +   +C+  +   + LI GLCK G+++ A 
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+  ++   G  P+VVTYN ++HG C  GQ ++A +L  DM A+G+APN VT+  L+ G 
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405

Query: 241 IRNNETSKVVELLHRM 256
            + N   +   +  +M
Sbjct: 406 CKANRLPEACGVFAQM 421



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L+  MI+ G  P+   Y+T++DG C +  ++ A  LF  M+  GC  N  ++NT
Sbjct: 96  LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G C+   ++++  ++ EM +K I P   +Y  L  GL +  ++  A KLF  M  S 
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG 215

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I G+C    + EA ELF+++R   C      ++ LID  CK GKL+ A+
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G +P+VVTY+ +I G C+  ++D A  L  DM  +   P  VT NTL+ G 
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 241 IRNNETSKVVELLHRM 256
            +     +  E+L  M
Sbjct: 336 CKAGRIKEAREVLDAM 351



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 118/240 (49%), Gaps = 9/240 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +LD M+  G  P+   Y+TL+ G C  G+ +RAREL   M   G   NVVTY  
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   + E+  ++++M S G  P + TY  L  G     QV+  LKLF EM  + 
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-VLKCE-LGIEAYSCLIDGLCKIGKLET 178
           ++ +   Y T    LCK+G    A E+ R  R  L+ E  G E Y   +DGL + GK+E 
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEM 520

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH-------DLFLDMEAKGVAPNCV 231
           A    + + R G +P       ++ G C  GQ  +A        DL    +A+G A   V
Sbjct: 521 ALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFV 580



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 93/180 (51%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M  + + P   +Y  L  GL +  ++  A  LF ++ HS V   T  Y + I GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
             +A ELF  +    C      Y+ +ID  CK G LE A +L + +   G +P+VVTYN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++ G C   ++++A  LF +ME  G  PN  + NT++LG  + ++  +  ++ H M+ ++
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/254 (36%), Positives = 148/254 (58%), Gaps = 6/254 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + + M++  + P+   YS+LI+G CL   ID A ++F  M   GC  +VV+YNTLI
Sbjct: 278 EAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLI 337

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K VE+ + L+ +M  +G+    VTYNTL  G F++  V+ A + F +M    V+
Sbjct: 338 NGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVS 397

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GLC NG + +A  +F  ++  + +L I  Y+ +I G+CK GK+E AW L
Sbjct: 398 PDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGL 457

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   GL P++VTY  M+ G C  G   +   L+  M+ +G+  N    ++++  C+ 
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN----DSML--CLG 511

Query: 243 NNETSKVVELLHRM 256
           + + +   EL+ +M
Sbjct: 512 DGDITISAELIKKM 525



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 141/257 (54%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A+RLL  MI+R + PN   YS L+D F   G++  A+E+F  M       ++VTY++L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING C    ++E+  ++  M+SKG  P VV+YNTL +G  +  +VE  +KLF +M    +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T TYNT I G  + G + +A E F  +        I  Y+ L+ GLC  G LE A  
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ + +  +  ++VTY  +I G C  G+++ A  LF  +  KG+ P+ VT+ T+M G  
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 242 RNNETSKVVELLHRMDE 258
                 +V  L  +M +
Sbjct: 482 TKGLQHEVEALYTKMKQ 498



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 141/258 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G RP+   Y+ +ID  C T  ++ A + F  +   G   NVVTY  
Sbjct: 171 VSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTA 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG C +    ++  L  +M+ + I P V+TY+ L     +  +V  A ++F+EM    
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I+GLC +  I EA ++F  +    C   + +Y+ LI+G CK  ++E   
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ + + GL+ N VTYN +I GF   G +DKA + F  M++ GV+P+  T+N L+ G 
Sbjct: 351 KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410

Query: 241 IRNNETSKVVELLHRMDE 258
             N    K + +   M +
Sbjct: 411 CDNGLLEKALVIFEDMQK 428



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 135/255 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+     +L++GFC    +  A  L   M   G   ++V YN +I+
Sbjct: 139 ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIID 198

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CKT+ V ++L+ + E+  KGIRP VVTY  L +GL    +   A +L  +M    +  
Sbjct: 199 SLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITP 258

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY+  +D   KNG ++EA E+F  +  +  +  I  YS LI+GLC   +++ A ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G  P+VV+YN +I+GFC   +++    LF  M  +G+  N VT+NTL+ G  + 
Sbjct: 319 DLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQV 378

Query: 244 NETSKVVELLHRMDE 258
            +  K  E   +MD 
Sbjct: 379 GDVDKAQEFFSQMDS 393



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 133/245 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+R + + ++ +I+ FC   ++  A  +   M   G   + VT  +L+NG+C+   V ++
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L  +M+  G RP +V YN +   L +  +V  AL  F E+    +     TY   ++G
Sbjct: 175 VSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNG 234

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC +G   +AA L R +   K    +  YS L+D   K GK+  A E+F+ + R+ + P+
Sbjct: 235 LCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPD 294

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +VTY+ +I+G C   ++D+A+ +F  M +KG  P+ V++NTL+ G  +       ++L  
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 255 RMDER 259
           +M +R
Sbjct: 355 KMSQR 359



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 139/253 (54%), Gaps = 13/253 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ DLM+ +G  P+   Y+TLI+GFC    ++   +LF  M   G ++N VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNT 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+ +  DV+++   +S+M S G+ P + TYN L  GL +   +E AL +F++MQ S+
Sbjct: 371 LIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSE 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T I G+CK G + +A  LF +L +   +  I  Y+ ++ GLC  G      
Sbjct: 431 MDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVE 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + + GLM N    +++  G   DG +  + +L   M + G AP+       +LG 
Sbjct: 491 ALYTKMKQEGLMKN---DSMLCLG---DGDITISAELIKKMLSCGYAPS-------LLGD 537

Query: 241 IRNNETSKVVELL 253
           I+     K + LL
Sbjct: 538 IKPVGCKKALSLL 550



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 107/218 (49%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A  LF  M       ++V +N L++   K K  +  ++L  +M   GIR  + T+N + +
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
                 QV  AL +  +M       +  T  + ++G C+   + +A  L   +  +    
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            I AY+ +ID LCK  ++  A + F+ + R G+ PNVVTY  +++G CN G+ + A  L 
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            DM  + + PN +T++ L+   ++N +  +  E+   M
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 57/116 (49%)

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A  LFR +   +    I  ++ L+  + K+ K +    L + +  +G+  ++ T+NI+I
Sbjct: 68  DAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + FC   Q+  A  +   M   G  P+ VT  +L+ G  R N  S  V L+ +M E
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 148/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A+  L  M+ +G+ P+   Y+T++ G C  G+++ A  LF  M+  GC  +VV YNT
Sbjct: 319 VNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNT 378

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + V +++   SEM+ +GI P  VTY+T+ HG   + Q++ A +LF EM   +
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   T T++  +DGLC+ G + EA  +F T+     E  I  Y+ L++G C   K+  A 
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ +   G  P++ +YNI+I+G+CN  +MDKA  L   M  K + PN VT+NT+M G 
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558

Query: 241 IRNNETSKVVELLHRM 256
                     EL  +M
Sbjct: 559 CYVGRLLDAQELFKKM 574



 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 149/291 (51%), Gaps = 35/291 (12%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M++ G  P+   Y+TLI+G C +G  + A  +F  M+ NGC  NVVTYNT+I+
Sbjct: 182 AVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIID 241

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK + V ++++  SEM+ +GI P  +TYN++ HGL  + Q+  A +LF  M+ +    
Sbjct: 242 SLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKP 301

Query: 124 ETSTYNTFID-----------------------------------GLCKNGYIVEAAELF 148
           +  TYN  ID                                   GLC  G + EA  LF
Sbjct: 302 DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLF 361

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           + +    C+  + AY+ +ID LCK   +  A E    +   G+ PN VTY+ ++HGFCN 
Sbjct: 362 KKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNL 421

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           GQ+D+A  LF +M  + V PN +TF+ L+ G  +    S+   +   M E+
Sbjct: 422 GQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEK 472



 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 141/259 (54%), Gaps = 8/259 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA++L   M+ R V PN   +S L+DG C  G +  AR +F +M   G   N+ TYN 
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYC    + E+  ++  M+ KG  P + +YN L +G     +++ A  L  +M    
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG----IEAYSCLIDGLCKIGKL 176
           +   T TYNT + GLC  G +++A ELF+ +    C  G    +  YS L++GLCK G L
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKM----CSSGMLPTLMTYSILLNGLCKHGHL 599

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A +LF+S+    L P+++ Y I+I G    G+++ A  LF  + A G+ P   T+N +
Sbjct: 600 DEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVM 659

Query: 237 MLGCIRNNETSKVVELLHR 255
           + G ++   + +  EL  +
Sbjct: 660 IKGLLKEGLSDEAYELFRK 678



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 134/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A   L  M+ RG+ PNA  YST++ GFC  G++D A +LF  M     M N +T++ 
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C+   V E+  ++  M  KG+ P + TYN L +G     ++  A K+F+ M    
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKG 508

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +  +YN  I+G C +  + +A  L   + V K       Y+ ++ GLC +G+L  A 
Sbjct: 509 CAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQ 568

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ELF+ +   G++P ++TY+I+++G C  G +D+A  LF  M+ K + P+ + +  L+ G
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEG 627



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M + G++P+   ++TLI+G C  G+I  A EL+  M  +G   +V++YNT
Sbjct: 144 VDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNT 203

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C + +   +++++ +M   G +P VVTYNT+   L +   V  A+    EM    
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ + GLC  G + EA  LF+ +    C+  +  Y+ +ID L K   +  A 
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    +   G+ P+VVTY  ++HG C  GQ+++A  LF  ME KG  P+ V +NT++   
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   +  +E L  M +R
Sbjct: 384 CKDRLVNDAMEFLSEMVDR 402



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RL   M Q+G +P+   Y+T+ID  C    ++ A E    M   G   N VTY+T
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G+C    ++E+  L+ EM+ + + P  +T++ L  GL +   V  A  +F+ M    
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  ++G C    + EA ++F  +    C   + +Y+ LI+G C   +++ A 
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +    L PN VTYN ++ G C  G++  A +LF  M + G+ P  +T++ L+ G 
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGL 593

Query: 241 IRNNETSKVVELLHRMDER 259
            ++    + ++L   M E+
Sbjct: 594 CKHGHLDEALKLFKSMKEK 612



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M +   RP+   +   +       +      L   MD+ G  H V + N 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  C+   V+ +++++ +M   GI+P V+T+ TL +G+    +++ A++L++EM  S 
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YNT I+GLC +G    A  +F+ +    C+  +  Y+ +ID LCK   +  A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    +   G+ P+ +TYN ++HG C  GQ+++A  LF  ME  G  P+ VT+N ++   
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 241 IRNNETSKVVELLHRM 256
            ++   +   + L  M
Sbjct: 314 YKDRLVNDAADFLSEM 329



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 85/155 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  LL  M  + + PN   Y+T++ G C  G +  A+ELF  M  +G +  ++TY+ 
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   ++E+L L+  M  K + P ++ Y  L  G+F   ++E A  LF ++    
Sbjct: 589 LLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           +     TYN  I GL K G   EA ELFR  +++K
Sbjct: 649 IQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMK 683



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 111/226 (49%)

Query: 33  TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
           T  +D A   F  M       ++V +   +    K K     + L ++M   G+  TV +
Sbjct: 71  TISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYS 130

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
            N L + L  ++ V+ A+ ++ +M    +  +  T+ T I+G+C  G I  A EL+  + 
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMV 190

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
               E  + +Y+ LI+GLC  G    A  +F+ + + G  PNVVTYN +I   C D  ++
Sbjct: 191 RSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVN 250

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            A D   +M  +G+ P+ +T+N+++ G     + ++   L  RM++
Sbjct: 251 DAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQ 296


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/258 (38%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL++LM++ GVRP+   Y+TL+DG CLTG  D A +L   M   G   N  TYNTL+
Sbjct: 541 EAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLL 600

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK + ++++ +L  EML  G  P VVTYNT+ HGLF+  +   A +L+  M +S   
Sbjct: 601 HGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQ 660

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ++GLCKN  + EA ++F++L     +L I  ++ +I  L K GK E A +L
Sbjct: 661 WDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDL 720

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P+V TY ++      +G +++   LF  ME  G APN    N L+   + 
Sbjct: 721 FATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLH 780

Query: 243 NNETSKVVELLHRMDERN 260
             + S+    L ++DE+N
Sbjct: 781 RGDISRAGAYLSKLDEKN 798



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 148/337 (43%), Gaps = 82/337 (24%)

Query: 2   DEASRLLDLMIQ-RGVR--PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +EA  LL +M   +G+   P+   Y+T+I+GF   G++D+A  LF+ M   G   +VVTY
Sbjct: 283 EEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTY 342

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           NT+I+G CK + V+ +  ++ +ML KG++P+  TYN L HG     + +  ++L +EM  
Sbjct: 343 NTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMST 402

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRT---------------------LRVLKCE 157
            D+  +   Y   +D LCKNG   EA  +F +                     +R     
Sbjct: 403 HDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLS 462

Query: 158 LGIEAYSCLIDGLCKIGKLETA-------------------WE----------------- 181
             +  Y  LID LCK+G+++ A                   WE                 
Sbjct: 463 PNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLD 522

Query: 182 ----------------------LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
                                 L + + RVG+ P+V++YN ++ G C  G+ D+A  L  
Sbjct: 523 VVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            M + G+ PN  T+NTL+ G  +         LL  M
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREM 619



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 138/316 (43%), Gaps = 58/316 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID----------------------- 37
           +DEA  + D M Q+G+ PN   Y  LID  C  G +D                       
Sbjct: 446 IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWE 505

Query: 38  RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV------ 91
           +A EL   M   G   +VV +NTL+   C+   V E+  L   ML  G+RP V+      
Sbjct: 506 KAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLV 565

Query: 92  -----------------------------TYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
                                        TYNTL HG  +  +++ A  L  EM  +   
Sbjct: 566 DGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPT 625

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT + GL + G   EA EL+  +   + +  +  Y+ +++GLCK   ++ A+++
Sbjct: 626 PDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKM 685

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQSL   GL  +++T+NIMI      G+ + A DLF  + A G+ P+  T+  +    I+
Sbjct: 686 FQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIK 745

Query: 243 NNETSKVVELLHRMDE 258
                ++  L   M+E
Sbjct: 746 EGSLEELGVLFSAMEE 761



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 139/335 (41%), Gaps = 79/335 (23%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   MI RG+ P+   Y+T+IDG C    +DRA+ +F  M   G   +  TYN 
Sbjct: 320 VDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNC 379

Query: 61  LINGY-----------------------------------CKTKDVEESLNLYSEMLSKG 85
           LI+GY                                   CK     E+ N++  ++ KG
Sbjct: 380 LIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKG 439

Query: 86  IRP---------------------TVVTYNTLF-----------------------HGLF 101
           I+P                      VV Y  L                        +GL 
Sbjct: 440 IKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLC 499

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
            + + E A +L  EM    +  +   +NT +  LC+ G ++EA  L   +  +     + 
Sbjct: 500 TVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVI 559

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           +Y+ L+DG C  G+ + A +L   +  +GL PN  TYN ++HG+C   ++D A+ L  +M
Sbjct: 560 SYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREM 619

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              G  P+ VT+NT++ G  +    S+  EL   M
Sbjct: 620 LMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNM 654



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 4/226 (1%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFV-SMDINGCMHNVVTYNTLINGYCKT 68
           L+++ G R N  V++ L+ G C    +D A  + +  M   GC  NVV+YNTL+ G+C  
Sbjct: 220 LILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNE 279

Query: 69  KDVEESLNLYSEMLS-KGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
              EE+L L   M   +G+   P VV+YNT+ +G F   QV+ A  LF +M    +  + 
Sbjct: 280 NRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDV 339

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYNT IDGLCK   +  A  +F+ +     +     Y+CLI G    GK +    L + 
Sbjct: 340 VTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEE 399

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           +    L P+   Y +++   C +G+  +A ++F  +  KG+ P+ +
Sbjct: 400 MSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAM 445



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 120/236 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA++LLD+M+  G++PN F Y+TL+ G+C    ID A  L   M +NG   +VVTYNT+
Sbjct: 575 DEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTI 634

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G  +T    E+  LY  M++   +  + TYN + +GL + + V+ A K+F  +    +
Sbjct: 635 LHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGL 694

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+N  I  L K G   +A +LF T+        +E Y  + + L K G LE    
Sbjct: 695 QLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGV 754

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           LF ++   G  PN    N ++  F + G + +A      ++ K  +    T + L+
Sbjct: 755 LFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 7/238 (2%)

Query: 7   LLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           L D M++     V P+   YS LI  FC  G ++    +F  +   G   N + +N L+ 
Sbjct: 179 LFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLK 238

Query: 64  GYCKTKDVEESLN-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHS 119
           G C  K ++E+ N L   M   G  P VV+YNTL  G    ++ E AL+L   M   Q  
Sbjct: 239 GLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGL 298

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  +YNT I+G  + G + +A  LF  +        +  Y+ +IDGLCK   ++ A
Sbjct: 299 SCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRA 358

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +FQ +   G+ P+  TYN +IHG+ + G+  +   L  +M    + P+C  +  L+
Sbjct: 359 KAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLL 416



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 12/159 (7%)

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE------LFRTLRVLKCELGIEA 162
           ALKLFD +      A  + +N  +  + +        E      LF  + V +C   +  
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRM-VRECSDKVAP 193

Query: 163 ----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               YS LI   C++G+LE  + +F  + + G   N + +N ++ G C+  ++D+A ++ 
Sbjct: 194 DRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNIL 253

Query: 219 L-DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           L  M   G  PN V++NTL+ G    N   + +ELLH M
Sbjct: 254 LWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVM 292



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/152 (21%), Positives = 60/152 (39%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++   +  +G++ +   ++ +I      G+ + A +LF ++   G + +V TY  
Sbjct: 679 VDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCL 738

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +     K   +EE   L+S M   G  P     N L         +  A     ++   +
Sbjct: 739 IAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKN 798

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
            + E ST +  I    +  Y   A  L    R
Sbjct: 799 FSLEASTASMLISLYSRGEYQQLAKSLPEKYR 830


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 148/257 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL +M+++GV+PN   Y  ++DG+CL  ++++A  +F  M   G   NV  YN +I
Sbjct: 200 QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIII 259

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK K V+E++NL+ EM  K I P VVTYN L  GL ++ ++  +L+L DEM+     
Sbjct: 260 NGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKT 319

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN+ +  LCKN ++ +A  L + ++    +  +  Y+ LIDGLCK G+LE A+ +
Sbjct: 320 VDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVI 379

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +   G    V TYN+MI+G C  G  D+A  L   ME     P+ V++ T++     
Sbjct: 380 FQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSE 439

Query: 243 NNETSKVVELLHRMDER 259
             ET K  +LL  M  R
Sbjct: 440 KGETVKTNKLLCAMIVR 456



 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 139/256 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL   MI +G+ PN + +S L+D  C   +  +A  L   M   G   NVVTY  ++
Sbjct: 165 DAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIM 224

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC    V ++LN+++ M+ +G+ P V  YN + +GL +  +V+ A+ LF EM    + 
Sbjct: 225 DGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKIN 284

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  IDGLCK G I  + EL   +R +   + I  Y+ L+  LCK   L+ A  L
Sbjct: 285 PDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITL 344

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G+ PNV TY  +I G C DG+++ A+ +F ++  +G      T+N ++ G  +
Sbjct: 345 VKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCK 404

Query: 243 NNETSKVVELLHRMDE 258
                + + LL RM++
Sbjct: 405 KGLFDEALALLSRMED 420



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 133/243 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E    + ++ +  V  +  +YST+ID  C    +  A  L+  M   G   NV T++ 
Sbjct: 128 MGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSI 187

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK +  ++++NL + M+ KG++P VVTY  +  G   ++QV  AL +F+ M    
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      YN  I+GLCK   + EA  LF+ +   K    +  Y+ LIDGLCK+GK+ T+ 
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +  +G   +++TYN ++H  C +  +D+A  L  +++ +G+ PN  T+ TL+ G 
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367

Query: 241 IRN 243
            ++
Sbjct: 368 CKD 370



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 134/257 (52%), Gaps = 3/257 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA    D ++  G + +   Y+ L++G C  GE   A ++     +N    +VV Y+T+I
Sbjct: 98  EALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNA---DVVMYSTII 154

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K V ++  LYSEM++KGI P V T++ L   L +  + + A+ L   M    V 
Sbjct: 155 DSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVK 214

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   +DG C    + +A  +F  +     E  +  Y+ +I+GLCK  +++ A  L
Sbjct: 215 PNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNL 274

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +    + P+VVTYNI+I G C  G++  + +L  +M + G   + +T+N+L+    +
Sbjct: 275 FKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCK 334

Query: 243 NNETSKVVELLHRMDER 259
           N+   + + L+  + ++
Sbjct: 335 NHHLDQAITLVKEIKDQ 351



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 3/246 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+Q    P    ++ ++           A  LF  ++ NG   ++VT   L+N YC T  
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +    ++ +++L  G  P  +T+ TL  G+    Q   AL   D +       +  +Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++GLCK G    A ++ R   V      +  YS +ID LCK   +  A+ L+  +   G
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWV---NADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PNV T++I++   C D +  +A +L   M  KGV PN VT+  +M G    N+ +K +
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 251 ELLHRM 256
            + + M
Sbjct: 238 NIFNVM 243


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 143/257 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++  MI  G  P+ F Y++LID +CL  ++D A  +F  M   GC+ ++V Y +LI
Sbjct: 304 QAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLI 363

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K++ ++++L  EM+  G  P VVT+ TL  G  ++ +   A +LF  M      
Sbjct: 364 HGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQV 423

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T    +DGLCK+  + EA  LF  +     +L I  YS ++DG+C  GKL TA EL
Sbjct: 424 PNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALEL 483

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  LP  GL  NV  Y IMI+GF   G +DKA DL  +ME  G  P+  T+N  + G + 
Sbjct: 484 FSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVA 543

Query: 243 NNETSKVVELLHRMDER 259
             E ++ ++ L  M ++
Sbjct: 544 EREIARSIKYLTMMRDK 560



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 131/293 (44%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  L+D + + G R +   Y  LI+G C  G+   A      M+      NVV Y+T++
Sbjct: 164 RAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVM 223

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V E+L L  EM  KGI+P +VTY  L  GL    + + A  L DEM    V 
Sbjct: 224 DGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVM 283

Query: 123 AETSTYNTFIDGLCKNGYIV-----------------------------------EAAEL 147
            +  + N  +D LCK G I+                                   EA  +
Sbjct: 284 PDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRV 343

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +    C   I AY+ LI G CKI  +  A  L   + +VG  P+VVT+  +I GFC 
Sbjct: 344 FELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQ 403

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G+   A +LFL+M   G  PN  T   ++ G  ++   S+ + L H M++ N
Sbjct: 404 VGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 456



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 118/232 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA+R+ +LM+ RG  P+   Y++LI G+C    I++A  L   M   G   +VVT+ T
Sbjct: 337 MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTT 396

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+      +  L+  M   G  P + T   +  GL +   +  AL LF  M+ S+
Sbjct: 397 LIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 456

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y+  +DG+C  G +  A ELF  L     ++ + AY+ +I+G  K G L+ A 
Sbjct: 457 LDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAE 516

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +L  ++   G MP+  TYN+ + G   + ++ ++      M  KG + +  T
Sbjct: 517 DLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATT 568



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 3/242 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++P+ F+ + +I+  C    +     +  +M   G   +VVT+  LING C   DV  +
Sbjct: 106 GIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRA 165

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L   +   G R  V TY  L +GL ++ +   A+    +M+  +       Y+T +DG
Sbjct: 166 VELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDG 225

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+G + EA  L   +     +  +  Y+CLI GLC  G+ + A  L   + ++G+MP+
Sbjct: 226 LCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPD 285

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM-LGCIRN--NETSKVVE 251
           + + NI++   C +G++ +A  +   M   G  P+  T+N+L+   C++N  +E ++V E
Sbjct: 286 LQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFE 345

Query: 252 LL 253
           L+
Sbjct: 346 LM 347



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 114/242 (47%), Gaps = 9/242 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCL-----TGEIDRARELFVSMDINGCMHNV 55
           +DEA      M +    P+   + TL+ GF +     T  I   +E+  S+ I     + 
Sbjct: 56  IDEALNFFHTMAKMNPLPSVIDF-TLLLGFIVKMKHYTTAISLVKEMHSSLGIK---PDT 111

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
              N +IN  C  K V    ++   ML  G+ P+VVT+  L +GL     V  A++L D 
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           ++ +   ++  TY   I+GLCK G   EA    R +        +  YS ++DGLCK G 
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +  A  L   +   G+ PN+VTY  +I G CN G+  +A  L  +M   GV P+  + N 
Sbjct: 232 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291

Query: 236 LM 237
           L+
Sbjct: 292 LV 293



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 35/251 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LLD M++ GV P+    + L+D  C  G+I +A+ +   M + G + +V TYN+LI
Sbjct: 269 EAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLI 328

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + YC    ++E+  ++  M+S+G  P +V Y +L HG  +I  +  A+ L DEM      
Sbjct: 329 DRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFT 388

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+ T                                   LI G C++G+   A EL
Sbjct: 389 PDVVTWTT-----------------------------------LIGGFCQVGRPLAAKEL 413

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++ + G +PN+ T  I++ G C    + +A  LF  ME   +  N V ++ ++ G   
Sbjct: 414 FLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCS 473

Query: 243 NNETSKVVELL 253
             + +  +EL 
Sbjct: 474 AGKLNTALELF 484



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 4/230 (1%)

Query: 31  CLTGE---IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK-GI 86
           C +G+   ID A   F +M     + +V+ +  L+    K K    +++L  EM S  GI
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           +P     N + + L  +  V     +   M    +     T+   I+GLC  G +  A E
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L   +        ++ Y  LI+GLCK+GK   A    + +      PNVV Y+ ++ G C
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            DG + +A  L L+M  KG+ PN VT+  L+ G        +   LL  M
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEM 277



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 34/194 (17%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K K ++E+LN +  M      P+V+ +  L   + ++     A+ L  EM HS +  +  
Sbjct: 52  KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEM-HSSLGIKPD 110

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+                                   + +I+ LC +  +   + +  ++
Sbjct: 111 TF---------------------------------ILNVVINSLCHLKLVAFGFSVLGTM 137

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            ++GL P+VVT+ I+I+G C  G + +A +L   +E  G   +  T+  L+ G  +  +T
Sbjct: 138 LKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKT 197

Query: 247 SKVVELLHRMDERN 260
           S+ V  L +M+ERN
Sbjct: 198 SEAVGWLRKMEERN 211


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 152/259 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ +L +MI++GV PN   Y++L+DG+ L  E+++A+ +F ++ + G   NV +Y+ 
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSV 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK K V+E++ L+ EM  K + P  VTY++L  GL +  ++     L DE+ +  
Sbjct: 340 MINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A   TYN+ ++GLCKN  + +A  L   ++    +  +  Y+ L+DGLCK G+L+ A 
Sbjct: 400 QPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQ 459

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            ++Q L   G   N+  Y +MI+G C +G  D+A  L   ME  G  P+ VT+ TL+   
Sbjct: 460 RIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519

Query: 241 IRNNETSKVVELLHRMDER 259
            +NN+  K V+LL  M  R
Sbjct: 520 FKNNKNGKAVKLLREMIAR 538



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 137/241 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   MI + + PN   +++LI GFC+ G++  A  L   M +N    NV T+N LI
Sbjct: 212 DAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILI 271

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  +V+++ ++ S M+ +G+ P VVTY +L  G F + +V  A  +F+ +    V 
Sbjct: 272 DGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVT 331

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               +Y+  I+GLCKN  + EA +LF+ + +         YS LIDGLCK G++   W+L
Sbjct: 332 PNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDL 391

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G   N++TYN +++G C + Q+DKA  L   M+ +G+ P+  T+ TL+ G  +
Sbjct: 392 IDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCK 451

Query: 243 N 243
           N
Sbjct: 452 N 452



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 147/262 (56%), Gaps = 5/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM---HNVVT 57
           + EA    D +I++    +   Y TLI+G C +GE   A +L     I G +    +V+ 
Sbjct: 139 VKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLL--RKIEGLLLVRPDVIM 196

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  +I+ +CK K V ++ +LYSEM+ K I P VVT+N+L +G   + Q++ A+ L +EM 
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            ++V     T+N  IDGLCK G + +A  +   +     E  +  Y+ L+DG   + ++ 
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +F ++   G+ PNV +Y++MI+G C +  +D+A  LF +M  K + PN VT+++L+
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376

Query: 238 LGCIRNNETSKVVELLHRMDER 259
            G  ++   S V +L+  ++ R
Sbjct: 377 DGLCKSGRISDVWDLIDEINNR 398



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 7/254 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTLINGYCKTK 69
           +++ G +P+    +TL+ G CL G++  A   F    I    H + V+Y TLING CK+ 
Sbjct: 114 ILKLGYQPDTVTVNTLLRGLCLNGKVKEALN-FHDHVIRKRFHLDQVSYGTLINGLCKSG 172

Query: 70  DVEESLNLYSEMLSKG---IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   +L L  ++  +G   +RP V+ Y  +     +   V  A  L+ EM    +     
Sbjct: 173 ETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N+ I G C  G + EA  L   + +      +  ++ LIDGLCK G+++ A  +   +
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + G+ PNVVTY  ++ G+    +++KA  +F  +  +GV PN  +++ ++ G  +N   
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 247 SKVVELLHRMDERN 260
            + V+L   M  +N
Sbjct: 351 DEAVKLFKEMHLKN 364



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 1/240 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P  F ++ ++           A      M++ G    + T+N LIN +     +  + ++
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            +++L  G +P  VT NTL  GL    +V+ AL   D +       +  +Y T I+GLCK
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 138 NGYIVEAAELFRTLR-VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           +G    A +L R +  +L     +  Y+ +ID  CK   +  A++L+  +    + PNVV
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+N +I+GFC  GQ+ +A  L  +M    V PN  TFN L+ G  +  E  K   +L  M
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 150/257 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  M + GV PN   Y++L+ G+ L  E+  AR+LF  M   GC  +V +Y+ LI
Sbjct: 319 EAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILI 378

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC  K ++E+  L++EM+ +G+ P  V+Y TL H   ++ ++  A +LF +M  +   
Sbjct: 379 NGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYL 438

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  ++G CK GY+ +A  LFR ++    +  +  Y+ LID +CK G L  A +L
Sbjct: 439 PDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKL 498

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  L   GL P+V  Y  +I+G C +G +D+A + F  ME  G  PN  ++N ++ G ++
Sbjct: 499 FSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQ 558

Query: 243 NNETSKVVELLHRMDER 259
           + + S+ V+L+  M ++
Sbjct: 559 HKDESRAVQLIGEMRDK 575



 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 144/290 (49%), Gaps = 35/290 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M+ RG +P+ + Y+T+I+G C  GE   A  L   M   GC  +VVTY+TLI
Sbjct: 179 QALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLI 238

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+L+++S M +KGI PTVV+Y +L  GL    + + A  + +EM   ++ 
Sbjct: 239 DSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIM 298

Query: 123 AETSTYNTFIDGLCKNG-----------------------------------YIVEAAEL 147
            +  T++  ID  CK G                                    +VEA +L
Sbjct: 299 PDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKL 358

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +    C+  + +YS LI+G C + +++ A +LF  +   GL PN V+Y  +IH FC 
Sbjct: 359 FDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQ 418

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
            G++ +A +LF DM   G  P+  T++ L+ G  +     K   L   M 
Sbjct: 419 LGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQ 468



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 122/223 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D+MI RG +P+ F YS LI+G+C+   ID A++LF  M   G   N V+Y TLI
Sbjct: 354 EARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLI 413

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +C+   + E+  L+ +M + G  P + TY+ L  G  +   +  A +LF  MQ + + 
Sbjct: 414 HAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLK 473

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                Y   ID +CK+G +  A +LF  L V   +  ++ Y+ +I+GLCK G L+ A E 
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEA 533

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           F+ +   G  PN  +YN++I GF       +A  L  +M  KG
Sbjct: 534 FRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 129/245 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ PN    + LI+ FCL   +D    +   +   G    ++T+ TLING CK  +  ++
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQA 180

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L+ +M+++G +P V TY T+ +GL ++ +   A  L  +M       +  TY+T ID 
Sbjct: 181 LELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDS 240

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + EA ++F  ++       + +Y+ LI GLC   + + A  +   +  + +MP+
Sbjct: 241 LCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPD 300

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +VT++++I  FC +G + +A  +   M   GV PN +T+N+LM G     E  +  +L  
Sbjct: 301 IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFD 360

Query: 255 RMDER 259
            M  R
Sbjct: 361 VMITR 365



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 123/238 (51%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFC-LTGEIDRARELFVSMDINGCMHNVVTYN 59
           +D+A    + M+ R   P    ++ L+     +    D    L   M++ G   N  T N
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LIN +C  + V+   ++ ++++  G++PT++T+ TL +GL +  +   AL+LFD+M   
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TY T I+GLCK G    AA L + +  + C+  +  YS LID LCK   +  A
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            ++F  +   G+ P VV+Y  +I G C+  +  +A  +  +M +  + P+ VTF+ L+
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLI 308



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 66/127 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL   M    ++PN  +Y+ LID  C +G ++ AR+LF  + ++G   +V  Y T
Sbjct: 457 LGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTT 516

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   ++E+L  + +M   G  P   +YN +  G  +      A++L  EM+   
Sbjct: 517 IINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576

Query: 121 VAAETST 127
             A+  T
Sbjct: 577 FVADEGT 583


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 148/258 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  RL+D +   GVRP+   Y+TLIDG CL G ID A +L   M   G   +  +YNTL+
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++ + + + +MLS GI P VVTYNT+ HGLF+  +   A +L+  M +S   
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ++GLCK+  + EA ++F+ L     +L I  ++ +I  L K G+ E A +L
Sbjct: 621 WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 680

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++P  GL+ NVVTY +++     +G +++   LF  ME  G APN    N L+   + 
Sbjct: 681 FAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 740

Query: 243 NNETSKVVELLHRMDERN 260
             + S+    L ++DERN
Sbjct: 741 RGDISRAGAYLSKLDERN 758



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E   LL+LM+  G+ PN  +++     +   G ID+A ++F  M   G   + V+Y  
Sbjct: 359 LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGA 418

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V+++   +++M+++G+ P +V +++L +GL  + + E   +LF EM +  
Sbjct: 419 LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      +NT +  LCK G ++E   L  ++  +     + +Y+ LIDG C  G ++ A 
Sbjct: 479 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 538

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +  VGL P+  +YN ++HG+C  G++D A+  F  M + G+ P  VT+NT++ G 
Sbjct: 539 KLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGL 598

Query: 241 IRNNETSKVVELLHRM 256
            +    S+  EL   M
Sbjct: 599 FQTKRFSEAKELYLNM 614



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 3/239 (1%)

Query: 2   DEASRLLDLMIQRGV---RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +EA  LL +M    V    PN   YST+I+GF   G++D+   LF+ M   G   +VVTY
Sbjct: 182 EEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTY 241

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
            T+I+G CK +  + +  ++ +M+  G++P + TYN L HG   I + +  +++ +EM  
Sbjct: 242 TTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                   TY + ++ LCKNG   EA   F ++     +  +  Y  ++ G    G L  
Sbjct: 302 GGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSE 361

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +L   +   G+ PN   +NI    +   G +DKA D+F  M  +G++P+ V++  L+
Sbjct: 362 MHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALI 420



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 35/272 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+   L   M+ RG+ P+   Y+T+IDG C     DRA  +F  M  NG   N+ TYN 
Sbjct: 219 VDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNC 278

Query: 61  LINGY-----------------------------------CKTKDVEESLNLYSEMLSKG 85
           LI+GY                                   CK     E+   +  M+ KG
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKG 338

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I+P+V TY  + HG      +     L + M  + ++     +N F     K G I +A 
Sbjct: 339 IKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAM 398

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++F  +R         +Y  LID LCK+G+++ A   F  +   G+ P++V ++ +++G 
Sbjct: 399 DIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGL 458

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           C   + +K  +LF +M   G+ PN V FNT++
Sbjct: 459 CTVDKWEKVEELFFEMLNVGIHPNIVFFNTIL 490



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 129/253 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  GV P+  V+S+L+ G C   + ++  ELF  M   G   N+V +NT
Sbjct: 429 VDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNT 488

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK   V E   L   +   G+RP V++YNTL  G      ++ A KL + M    
Sbjct: 489 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++ +YNT + G CK G I  A   FR +       G+  Y+ ++ GL +  +   A 
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+ ++   G   ++ TYNI+++G C    +D+A  +F ++ +KG+  N +TFN ++   
Sbjct: 609 ELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGAL 668

Query: 241 IRNNETSKVVELL 253
           ++       ++L 
Sbjct: 669 LKGGRKEDAMDLF 681



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 28/288 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   L   M + G  PN+ + + L+      G+I RA      +D         T + 
Sbjct: 709 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSM 768

Query: 61  LINGYC----------------------------KTKDVEESLNLYSEMLSKGIRPTVVT 92
           LI+ +                             K + ++++ +L+ EML KG+ P VVT
Sbjct: 769 LISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVT 828

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           YNT+ HGLF+  +   A +L+  M +S       TYN  ++GLCK+  + EA ++F++L 
Sbjct: 829 YNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLC 888

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
               +L I  ++ +I  L K G+ E A +LF ++P  GL+P+VVTY ++      +G ++
Sbjct: 889 SKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLE 948

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +   LFL ME  G   +    N L+   ++  + S+    L ++DE+N
Sbjct: 949 EFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKN 996



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 130/289 (44%), Gaps = 39/289 (13%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYNTLINGYCKT 68
           L+++ G R +  V + L++G C    +  A ++ +  M   GCM + V+YN L+ G C  
Sbjct: 119 LILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNE 178

Query: 69  KDVEESLNLYSEMLSKGI---RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           K  EE+L L   M    +    P VV+Y+T+ +G F   QV+    LF EM    +  + 
Sbjct: 179 KRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDV 238

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG---------------- 169
            TY T IDGLCK      A  +F+ +     +  I+ Y+CLI G                
Sbjct: 239 VTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEE 298

Query: 170 -------------------LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                              LCK G+   A   F S+   G+ P+V TY IM+HG+   G 
Sbjct: 299 MSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGA 358

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + + HDL   M A G++PN   FN       +     K +++ ++M ++
Sbjct: 359 LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQ 407



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 4/226 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PN   YS LI  FC  G ++     F  +   G   + +  N L+NG C  K V E++
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 76  N-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV---AAETSTYNTF 131
           + L   M   G  P  V+YN L  GL    + E AL+L   M    V        +Y+T 
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+G    G + +   LF  +        +  Y+ +IDGLCK    + A  +FQ +   G+
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            PN+ TYN +IHG+ + G+  +   +  +M A G  PNC T+ +L+
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLL 315



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 63/319 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID----------------------- 37
           +DEAS+LL+ M+  G++P++F Y+TL+ G+C  G ID                       
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT 593

Query: 38  ------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                        A+EL+++M  +G   ++ TYN ++NG CK+  V+E++ ++  + SKG
Sbjct: 594 ILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKG 653

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           ++  ++T+N +   L +  + E A+ LF  +  + +     TY   ++ L + G + E  
Sbjct: 654 LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFD 713

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            LF  +         +  + L+  L   G +  A      L          T +++I  F
Sbjct: 714 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 773

Query: 206 CND----------------------------GQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +D                             ++D A+ LF +M  KG+ P+ VT+NT++
Sbjct: 774 SSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 833

Query: 238 LGCIRNNETSKVVELLHRM 256
            G  +    S+  EL   M
Sbjct: 834 HGLFQTGRFSEAKELYLSM 852



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 7/256 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++   +  +G++ N   ++ +I      G  + A +LF ++  NG + NVVTY  
Sbjct: 639 VDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRL 698

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++    +   +EE  +L+S M   G  P     N L   L     +  A     ++   +
Sbjct: 699 VVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 758

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + E ST +  I     + Y   A  L +  R+L      EA S  +  + K  +++ A+
Sbjct: 759 FSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN-----EANSSAL--IKKARRIDDAY 811

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   GL P+VVTYN ++HG    G+  +A +L+L M       N  T+N ++ G 
Sbjct: 812 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGL 871

Query: 241 IRNNETSKVVELLHRM 256
            ++N   +  ++   +
Sbjct: 872 CKSNCVDEAFKMFQSL 887



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 63/154 (40%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +DEA ++   +  +G++ N   ++ +I      G  + A +LF ++  NG + +VVTY  
Sbjct: 877  VDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRL 936

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +     +   +EE   L+  M   G        N L   L +   +  A     ++   +
Sbjct: 937  VAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKN 996

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
             + E ST +  I    +  Y   A  L    R+L
Sbjct: 997  FSLEASTTSELISLFSRGEYQHHAKSLPEKYRLL 1030


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/254 (39%), Positives = 144/254 (56%), Gaps = 4/254 (1%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RL DL+      PN F ++ +ID  C  GE+  AR LFV M   GC  +VVTYN+LI+GY
Sbjct: 190 RLFDLLPV----PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGY 245

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K  D+EE   L SEM   G    VVTYN L +   +  ++E A   F EM+   V A  
Sbjct: 246 GKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANV 305

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            T++TF+D  CK G + EA +LF  +RV         Y+ L+DG CK G+L+ A  L   
Sbjct: 306 VTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE 365

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   GL+PNVVTY +M+ G C +G++ +A ++   ME  GV  N + + TL+ G   NN 
Sbjct: 366 MVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNN 425

Query: 246 TSKVVELLHRMDER 259
           + + ++LL++M  +
Sbjct: 426 SERALDLLNQMKNK 439



 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 129/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +L   M  RG+ PN F Y++L+DG C  G +D A  L   M   G + NVVTY  
Sbjct: 321 VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 380

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK   V E+ N+ S M   G++   + Y TL HG F  +  E AL L ++M++  
Sbjct: 381 MVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG 440

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  + S Y T I GLCK+  + EA  L   +           Y+ ++D L K GK   A 
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G  PNVVTY  +I G C  G + +A   F  M   G+ PN   +  L+ G 
Sbjct: 501 ALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560

Query: 241 IRNNETSKVVELLHRMDER 259
            +    +K + L++ M ++
Sbjct: 561 CKIGSLNKAMHLMNEMIDK 579



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L+  M + G   +   Y+ LI+ F   G +++A   F  M   G + NVVT++T
Sbjct: 251 LEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFST 310

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++ +CK   V+E++ L+++M  +G+ P   TY +L  G  +  +++ A+ L DEM H  
Sbjct: 311 FVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 370

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   +DGLCK G + EA  +   +     +     Y+ LI G       E A 
Sbjct: 371 LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERAL 430

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+  +V  Y  +I G C D ++D+A  L   M   G+ PN V + T+M   
Sbjct: 431 DLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDAL 490

Query: 241 IRNNETSKVVELLHRM 256
            +  + S+ V LLH++
Sbjct: 491 FKAGKESEAVALLHKI 506



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L LM + GV+ N  +Y+TLI G  +    +RA +L   M   G   +V  Y TLI
Sbjct: 393 EADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLI 452

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CK + V+E+ +L  +M   G+RP  V Y T+   LF+  +   A+ L  ++  S   
Sbjct: 453 WGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQ 512

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDGLCK G I EA   F  +R L  +  ++AY+ LIDG CKIG L  A  L
Sbjct: 513 PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHL 572

Query: 183 FQ-------SLPRV----------------------------GLMPNVVTYNIMIHGFCN 207
                    SL +V                            GL  ++  Y   I GFCN
Sbjct: 573 MNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCN 632

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              M +A  +  +M   G+ P+   +N L+
Sbjct: 633 MNMMQEARGVLSEMIGTGITPDKTVYNCLI 662



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 110/223 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M   G+RPN  +Y+T++D     G+   A  L   +  +G   NVVTY  
Sbjct: 461 VDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCA 520

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   + E+++ +++M   G+ P V  Y  L  G  +I  +  A+ L +EM    
Sbjct: 521 LIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKG 580

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   Y + IDG  K   + +A  L   +     +L +  Y+C I G C +  ++ A 
Sbjct: 581 MSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEAR 640

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
            +   +   G+ P+   YN +I  +   G M++A  L  +ME+
Sbjct: 641 GVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 144/268 (53%), Gaps = 11/268 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+ R + P+   YS++IDGFC    +D A  +F      GC  +++T+NTLI
Sbjct: 341 EAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLI 400

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYC+ K V++ + L  EM   G+    +TY TL HG  ++  +  A  L  EM  S V 
Sbjct: 401 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVC 460

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-----------CELGIEAYSCLIDGLC 171
               T NT +DGLC NG + +A E+F+ ++  K            E  ++ Y+ LI GL 
Sbjct: 461 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLI 520

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  G++P+ +TY+ MI G C   ++D+A  +F  M +K  +P+ V
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVV 580

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
           TFNTL+ G  +       +EL   M +R
Sbjct: 581 TFNTLITGYCKAGMVDDGLELFCEMGQR 608



 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 139/267 (52%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  L   +G  P+   ++TLI G+C    +D   +L   M   G + N +TY T
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+  D+  + +L  EM+S G+ P VVT NTL  GL +  +++ AL++F  MQ S 
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 121 -----------VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
                      V  +  TYN  I GL   G  +EA EL+  +           YS +IDG
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +L+ A ++F S+      P+VVT+N +I G+C  G +D   +LF +M  +G+  +
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVAD 613

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+ TL+ G  + +     +++   M
Sbjct: 614 AITYITLIYGFRKVDNIDGALDIFQEM 640



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 124/241 (51%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +Y+T+IDG    G    A  LF+ M       ++VTYN +ING+C +    ++  L
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML + I P VVT++ L +   +  +   A +L+DEM    +   T TY++ IDG CK
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +  A  +F       C   I  ++ LI G C+  +++   +L   +   GL+ N +T
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  +IHGFC  G ++ A DL  +M + GV PN VT NTL+ G   N +    +E+   M 
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 258 E 258
           +
Sbjct: 491 K 491



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 137/259 (52%), Gaps = 4/259 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D  S  LDL  Q   +PN   ++TL++G C  G +  A  L   M  +G   N +TY T+
Sbjct: 165 DRISEALDLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 223

Query: 62  INGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++G CK  D   +LNL  +M     I P VV YNT+  GL++  +   A  LF EMQ  +
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKE 283

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+G C +G   +A +L + +   K    +  +S LI+   K GK   A 
Sbjct: 284 IFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAE 343

Query: 181 ELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           EL+ + LPR  ++P+ VTY+ MI GFC   ++D A  +F     KG +P+ +TFNTL+ G
Sbjct: 344 ELYDEMLPR-SIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAG 402

Query: 240 CIRNNETSKVVELLHRMDE 258
             R       ++LLH M E
Sbjct: 403 YCRAKRVDDGIKLLHEMTE 421



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 141/267 (52%), Gaps = 11/267 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +LL  M + G+  N   Y+TLI GFC  G+++ A++L   M  +G   NVVT NT
Sbjct: 409 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNT 468

Query: 61  LINGYCKTKDVEESLNLYSEMLSK-----------GIRPTVVTYNTLFHGLFEIHQVEHA 109
           L++G C    ++++L ++  M              G+ P V TYN L  GL    +   A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEA 528

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
            +L++EM H  +  +T TY++ IDGLCK   + EA ++F ++        +  ++ LI G
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITG 588

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            CK G ++   ELF  + + G++ + +TY  +I+GF     +D A D+F +M + GV P+
Sbjct: 589 YCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPD 648

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T   ++ G     E  + V +L  +
Sbjct: 649 TITIRNMLTGLWSKEELERAVAMLEDL 675



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 147/269 (54%), Gaps = 11/269 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  M++R + P+   +S LI+ F   G+   A EL+  M     + + VTY+++I
Sbjct: 306 DAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMI 365

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK   ++ + +++    +KG  P ++T+NTL  G     +V+  +KL  EM  + + 
Sbjct: 366 DGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLV 425

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T TY T I G C+ G +  A +L + +        +   + L+DGLC  GKL+ A E+
Sbjct: 426 ANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEM 485

Query: 183 FQSL-----------PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           F+++           P  G+ P+V TYNI+I G  N+G+  +A +L+ +M  +G+ P+ +
Sbjct: 486 FKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           T+++++ G  + +   +  ++   M  ++
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFDSMGSKS 574



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P+   +  L+      G  D    L   M++     N  ++  
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  +C    +  +L+ + ++   G  PTVVT+NTL HGL    ++  AL LF +M   +
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPN 181

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T+ T ++GLC+ G +VEA  L   +     +     Y  ++DG+CK+G   +A 
Sbjct: 182 VV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  V  ++PNVV YN +I G   DG+   AH+LF++M+ K + P+ VT+N ++ G
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S   +LL  M ER 
Sbjct: 298 FCISGRWSDAEQLLQEMLERK 318



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 124/243 (51%), Gaps = 5/243 (2%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           NA+ ++ L+  FC   ++  A   F  +   G    VVT+NTL++G C    + E+L+L+
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M     +P VVT+ TL +GL    +V  A+ L D M    +     TY T +DG+CK 
Sbjct: 175 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 139 GYIVEAAELFRTLR-VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           G  V A  L R +  V      +  Y+ +IDGL K G+   A  LF  +    + P++VT
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN MI+GFC  G+   A  L  +M  + + P+ VTF+ L+   ++  +  +  EL   M 
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 258 ERN 260
            R+
Sbjct: 351 PRS 353



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 81/151 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++IDG C    +D A ++F SM       +VVT+NTLI
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYCK   V++ L L+ EM  +GI    +TY TL +G  ++  ++ AL +F EM  S V 
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVY 646

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + GL     +  A  +   L++
Sbjct: 647 PDTITIRNMLTGLWSKEELERAVAMLEDLQM 677



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 71/119 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   P+   ++TLI G+C  G +D   ELF  M   G + + +TY T
Sbjct: 560 LDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYIT 619

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  +++ +L+++ EM+S G+ P  +T   +  GL+   ++E A+ + +++Q S
Sbjct: 620 LIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMS 678



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 97/198 (48%), Gaps = 4/198 (2%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G+ + K ++++++L+  M+     P+V+ +  L   +  + + +  + L  +M+   
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     ++   +   C    +  A   F  +  L     +  ++ L+ GLC   ++  A 
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + +    PNVVT+  +++G C +G++ +A  L   M   G+ PN +T+ T++ G 
Sbjct: 172 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 228 CKMGDTVSALNLLRKMEE 245


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 145/245 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M++  V+P+   YSTL+DG+ L  E+ +A+ +F +M + G   +V TY  
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K V+E+LNL+ EM  K + P +VTY++L  GL +  ++ +   L DEM    
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A   TY++ IDGLCKNG++  A  LF  ++          ++ L+DGLCK G+L+ A 
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 464

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+FQ L   G   NV TYN+MI G C  G +++A  +   ME  G  P+ VTF  +++  
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524

Query: 241 IRNNE 245
            + +E
Sbjct: 525 FKKDE 529



 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M  +G+  +   YSTLI GFC+ G++  A  L   M +     NV TYN 
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   V+E+ ++ + ML   ++P V+TY+TL  G F +++V+ A  +F+ M    
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   I+G CKN  + EA  LF+ +       GI  YS LIDGLCK G++   W
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVW 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G   NV+TY+ +I G C +G +D+A  LF  M+ +G+ PN  TF  L+ G 
Sbjct: 395 DLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGL 454

Query: 241 IRNNETSKVVELLHRM 256
            +        E+   +
Sbjct: 455 CKGGRLKDAQEVFQDL 470



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 142/259 (54%), Gaps = 2/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           + EA  LL+ M+ + + PN + Y+ L+D  C  G++  A+ +   M +  C+  +V+TY+
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM-LKACVKPDVITYS 308

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL++GY    +V+++ ++++ M   G+ P V TY  L +G  +   V+ AL LF EM   
Sbjct: 309 TLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++     TY++ IDGLCK+G I    +L   +        +  YS LIDGLCK G L+ A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRA 428

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF  +   G+ PN  T+ I++ G C  G++  A ++F D+  KG   N  T+N ++ G
Sbjct: 429 IALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDG 488

Query: 240 CIRNNETSKVVELLHRMDE 258
             +     + + +L +M++
Sbjct: 489 HCKQGLLEEALTMLSKMED 507



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 142/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A    D ++ +G + N   Y TLI+G C  G+   A +L   +D      NVV Y+T
Sbjct: 145 VKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYST 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + V E+  L+SEM  KGI   VVTY+TL +G     +++ A+ L +EM    
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  +D LCK G + EA  +   +     +  +  YS L+DG   + +++ A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++  +G+ P+V TY I+I+GFC +  +D+A +LF +M  K + P  VT+++L+ G 
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 241 IRNNETSKVVELLHRMDER 259
            ++     V +L+  M +R
Sbjct: 385 CKSGRIPYVWDLIDEMHDR 403



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 128/248 (51%), Gaps = 2/248 (0%)

Query: 14   RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
            +G++P+ F  + LI+ FC  G+I     +   +   G   + +T+ TLING C    V +
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 74   SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
            +L+ + ++L++G +   V+Y TL +G+ +I     A+KL  ++       +   YNT ID
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 134  GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
             LCK+  + +A  LF  + V      +  Y+ LI G C +GKL+ A  L   +    + P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 194  NVVTYNIMIHGFCNDGQ--MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            NV TYNI++   C +G+  +D++  +   ME  G   N VTF  ++      +E  KV +
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 252  LLHRMDER 259
            LLH M  R
Sbjct: 1195 LLHEMIAR 1202



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 121/243 (49%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G++P+    + LI+ FC  G+I     +   +   G   + VT NTLI G C    V++
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ + ++L++G +   V+Y TL +G+ +I     A+KL  ++           Y+T ID
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIID 207

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK   + EA  LF  + V      +  YS LI G C  GKL+ A  L   +    + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV TYNI++   C +G++ +A  +   M    V P+ +T++TLM G     E  K   + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 254 HRM 256
           + M
Sbjct: 328 NAM 330



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 112/222 (50%), Gaps = 2/222 (0%)

Query: 7    LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
            +L  +++RG  P+   ++TLI+G CL G++++A      +   G   N V+Y TLING C
Sbjct: 983  ILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVC 1042

Query: 67   KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
            K  D   ++ L  ++  +  +P VV YNT+   L +   V  A  LF EM    ++A+  
Sbjct: 1043 KIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVV 1102

Query: 127  TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK--LETAWELFQ 184
            TYNT I G C  G + EA  L   + +      +  Y+ L+D LCK GK  L+ +  +  
Sbjct: 1103 TYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLS 1162

Query: 185  SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
             +   G   N VT+ I+I       + DK   L  +M A+G+
Sbjct: 1163 KMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P    ++ ++D F        A  L   +++ G   +++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    +    ++ +++L +G  P  VT NTL  GL    QV+ AL   D++    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y T I+G+CK G    A +L + +     +  +  YS +ID LCK   +  A+
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G+  +VVTY+ +I+GFC +G++ +A  L  +M  K + PN  T+N L+   
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +   +L  M
Sbjct: 280 CKEGKVKEAKSVLAVM 295



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 100/192 (52%)

Query: 46   MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
            +++ G   ++ T N LIN +C    +  + ++ +++L +G  P  +T+ TL +GL    Q
Sbjct: 952  LELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQ 1011

Query: 106  VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
            V  AL   D++          +Y T I+G+CK G    A +L R +     +  +  Y+ 
Sbjct: 1012 VNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNT 1071

Query: 166  LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            +ID LCK   +  A+ LF  +   G+  +VVTYN +I+GFC  G++ +A  L   M  K 
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT 1131

Query: 226  VAPNCVTFNTLM 237
            + PN  T+N L+
Sbjct: 1132 INPNVRTYNILV 1143



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 9/202 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M Q+ + P    YS+LIDG C +G I    +L   M   G   NV+TY++
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSS 414

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   ++ ++ L+++M  +GIRP   T+  L  GL +  +++ A ++F ++    
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK-------I 173
                 TYN  IDG CK G + EA  +   +    C      +  +I  L K       +
Sbjct: 475 YHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNV 534

Query: 174 GKLETAWELFQSLPRVGLMPNV 195
           G  +  WE+ +   + G  P++
Sbjct: 535 GFDKKVWEIVEH--KKGETPSI 554



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 93/188 (49%)

Query: 69   KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
            K    +++L   +  KGI+P + T N L +    + Q+     +  ++       +T T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 129  NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
             T I+GLC  G + +A      L     +L   +Y  LI+G+CKIG    A +L + +  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 189  VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
                P+VV YN +I   C    + KA+ LF +M  KG++ + VT+NTL+ G     +  +
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 249  VVELLHRM 256
             + LL++M
Sbjct: 1120 AIGLLNKM 1127



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 71/158 (44%)

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
            I  V+ A+  F+ M           +N  +D   K  +   A  L   L +   +  + 
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             + LI+  C +G++   + +   + + G  P+ VT N +I G C  GQ+ KA      +
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            A+G   N V++ TL+ G  +  +T   ++LL ++D R
Sbjct: 156 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGR 193


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 142/259 (54%), Gaps = 2/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA + L+ M  R + PN   Y+ LIDG C  G +D A  L   M    C+   VTYN+LI
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLI 122

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK +   E+ +L  EM+  G  P + TY TL  G  +  + + AL++F+++      
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            +  TY+  IDGLCK G + EA +LF R ++   C      Y+ LI G C++GK++ A  
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G  P+VVTY  +++GFC   ++D A+DL   M  KG+ P+ VTF +LM G  
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 242 RNNETSKVVELLHRMDERN 260
           R N  S  V +L  M  ++
Sbjct: 303 RENRLSDAVHILGEMRRKS 321



 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 140/260 (53%), Gaps = 2/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A   L  M+ +G  P+ + Y+ +I   C+   +  AR+    M       NVVTY  
Sbjct: 27  LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTV 86

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V+E++ L S+M  K + PT VTYN+L  GL +  +   A  L +EM +S 
Sbjct: 87  LIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSG 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I G CK+    +A  +F  L        +  YSCLIDGLCK G+L+ A 
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +LF  + + G  MPN VTYN +I GFC  G+MD+A +L   M   G +P+ VT+ TLM G
Sbjct: 206 DLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265

Query: 240 CIRNNETSKVVELLHRMDER 259
             +        +LL++M  +
Sbjct: 266 FCKLARLDDAYDLLNQMTRK 285



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 140/258 (54%), Gaps = 3/258 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNT 60
           D+A R+ + ++ RG RP+   YS LIDG C  G +  A +LF  M  +G CM N VTYN+
Sbjct: 167 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+   ++E++NL   M   G  P VVTY TL +G  ++ +++ A  L ++M    
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+ + +DGLC+   + +A  +   +R   C   +  Y+ ++DG C+  +LE A 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    L  +   PNVV++NIMI G C   +  +A +L  +   +   P+ V + T++ G 
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 241 IRNNETSKVVELLHRMDE 258
            R  +  +   +  +M E
Sbjct: 405 CREKKVDEACRVYRKMLE 422



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 144/259 (55%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M ++ V P A  Y++LI G C       A +L   M  +GC+ ++ TY T
Sbjct: 97  VDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
           LI G+CK+K  +++L ++ +++++G RP VVTY+ L  GL +  +++ A+ LF  M  S 
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                T TYN+ I G C+ G + EA  L   +        +  Y+ L++G CK+ +L+ A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++L   + R GL P+VVT+  ++ G C + ++  A  +  +M  K  +P   T+NT++ G
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335

Query: 240 CIRNNETSKVVE-LLHRMD 257
             R N+  +  + +L  MD
Sbjct: 336 YCRANQLEEARKFMLEEMD 354



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 7/260 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  LL+ M + G  P+   Y+TL++GFC    +D A +L   M   G   +VVT+ +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C+   + +++++  EM  K   PTV TYNT+  G    +Q+E A K    ++  D
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 ++N  I GLCK     EA EL    R  +C   +  Y+ +IDGLC+  K++ A 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 181 ELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++  L   G +PN +TY+ ++ G CN G +D+A         KG  PN  T+N L+  
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDA 470

Query: 240 CIRNNETSKVVELLHRMDER 259
             + N      ELL  M +R
Sbjct: 471 FRKANRDEDARELLDDMVQR 490



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA  L   MI+ G   PN   Y++LI GFC  G++D A  L   M   G   +VVTY 
Sbjct: 201 LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL+NG+CK   ++++ +L ++M  KG+ P VVT+ +L  GL   +++  A+ +  EM+  
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             +    TYNT +DG C+   + EA +    L  + C   + +++ +I GLCK+ +   A
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLML 238
            EL +   R    P+VV Y  +I G C + ++D+A  ++  M E  G  PN +T++TL+ 
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVT 438

Query: 239 G 239
           G
Sbjct: 439 G 439



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 1/208 (0%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C  + VTY +LI G CK K +E++L    +M+SKG  P V TY  + H L   +++  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A K  +EM + ++     TY   IDGLCK G + EA  L   +R  KC      Y+ LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLIS 123

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLCK  +   A++L + +   G +P++ TY  +I GFC   + D A  +F  + A+G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + VT++ L+ G  +     + ++L  RM
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRM 211



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 2/237 (0%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y++LI G C    +++A      M   G   +V TY  +I+  C    + E+     EM 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           ++ + P VVTY  L  GL +  +V+ A+ L  +M+   V     TYN+ I GLCK     
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAERAS 132

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA +L   +    C   I  Y+ LI G CK  K + A  +F+ L   G  P+VVTY+ +I
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVA-PNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            G C +G++ +A DLF  M   G   PN VT+N+L+ G  R  +  + + LL RM E
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%)

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C      Y+ LI GLCK+ +LE A      +   G  P+V TY  +IH  C + ++ +A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
               +M  + + PN VT+  L+ G  +     + V LL +M ++
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK 110



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 5/86 (5%)

Query: 1   MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA R+   M++  G  PN+  YSTL+ G C  G +DRAR         GC+ N+ TYN
Sbjct: 410 VDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYN 465

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKG 85
            LI+ + K    E++  L  +M+ +G
Sbjct: 466 LLIDAFRKANRDEDARELLDDMVQRG 491


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 142/259 (54%), Gaps = 2/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA + L+ M  R + PN   Y+ LIDG C  G +D A  L   M    C+   VTYN+LI
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLI 122

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK +   E+ +L  EM+  G  P + TY TL  G  +  + + AL++F+++      
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            +  TY+  IDGLCK G + EA +LF R ++   C      Y+ LI G C++GK++ A  
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G  P+VVTY  +++GFC   ++D A+DL   M  KG+ P+ VTF +LM G  
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 242 RNNETSKVVELLHRMDERN 260
           R N  S  V +L  M  ++
Sbjct: 303 RENRLSDAVHILGEMRRKS 321



 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 140/260 (53%), Gaps = 2/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A   L  M+ +G  P+ + Y+ +I   C+   +  AR+    M       NVVTY  
Sbjct: 27  LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTV 86

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V+E++ L S+M  K + PT VTYN+L  GL +  +   A  L +EM +S 
Sbjct: 87  LIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSG 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I G CK+    +A  +F  L        +  YSCLIDGLCK G+L+ A 
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +LF  + + G  MPN VTYN +I GFC  G+MD+A +L   M   G +P+ VT+ TLM G
Sbjct: 206 DLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265

Query: 240 CIRNNETSKVVELLHRMDER 259
             +        +LL++M  +
Sbjct: 266 FCKLARLDDAYDLLNQMTRK 285



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 140/258 (54%), Gaps = 3/258 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNT 60
           D+A R+ + ++ RG RP+   YS LIDG C  G +  A +LF  M  +G CM N VTYN+
Sbjct: 167 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+   ++E++NL   M   G  P VVTY TL +G  ++ +++ A  L ++M    
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+ + +DGLC+   + +A  +   +R   C   +  Y+ ++DG C+  +LE A 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    L  +   PNVV++NIMI G C   +  +A +L  +   +   P+ V + T++ G 
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 241 IRNNETSKVVELLHRMDE 258
            R  +  +   +  +M E
Sbjct: 405 CREKKVDEACRVYRKMLE 422



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 144/259 (55%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M ++ V P A  Y++LI G C       A +L   M  +GC+ ++ TY T
Sbjct: 97  VDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHS 119
           LI G+CK+K  +++L ++ +++++G RP VVTY+ L  GL +  +++ A+ LF  M +  
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                T TYN+ I G C+ G + EA  L   +        +  Y+ L++G CK+ +L+ A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++L   + R GL P+VVT+  ++ G C + ++  A  +  +M  K  +P   T+NT++ G
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335

Query: 240 CIRNNETSKVVE-LLHRMD 257
             R N+  +  + +L  MD
Sbjct: 336 YCRANQLEEARKFMLEEMD 354



 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 7/260 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  LL+ M + G  P+   Y+TL++GFC    +D A +L   M   G   +VVT+ +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C+   + +++++  EM  K   PTV TYNT+  G    +Q+E A K    ++  D
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 ++N  I GLCK     EA EL    R  +C   +  Y+ +IDGLC+  K++ A 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 181 ELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++  L   G +PN +TY+ +I G CN G +D+A         KG  PN  T+N L+  
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDA 470

Query: 240 CIRNNETSKVVELLHRMDER 259
             + N      ELL  M +R
Sbjct: 471 FRKANRDEDARELLDDMVQR 490



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA  L   MI+ G   PN   Y++LI GFC  G++D A  L   M   G   +VVTY 
Sbjct: 201 LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL+NG+CK   ++++ +L ++M  KG+ P VVT+ +L  GL   +++  A+ +  EM+  
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             +    TYNT +DG C+   + EA +    L  + C   + +++ +I GLCK+ +   A
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLML 238
            EL +   R    P+VV Y  +I G C + ++D+A  ++  M E  G  PN +T++TL+ 
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLIT 438

Query: 239 G 239
           G
Sbjct: 439 G 439



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 1/208 (0%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C  + VTY +LI G CK K +E++L    +M+SKG  P V TY  + H L   +++  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A K  +EM + ++     TY   IDGLCK G + EA  L   +R  KC      Y+ LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLIS 123

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLCK  +   A++L + +   G +P++ TY  +I GFC   + D A  +F  + A+G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + VT++ L+ G  +     + ++L  RM
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRM 211



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 2/237 (0%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y++LI G C    +++A      M   G   +V TY  +I+  C    + E+     EM 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           ++ + P VVTY  L  GL +  +V+ A+ L  +M+   V     TYN+ I GLCK     
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAERAS 132

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA +L   +    C   I  Y+ LI G CK  K + A  +F+ L   G  P+VVTY+ +I
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVA-PNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            G C +G++ +A DLF  M   G   PN VT+N+L+ G  R  +  + + LL RM E
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%)

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C      Y+ LI GLCK+ +LE A      +   G  P+V TY  +IH  C + ++ +A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
               +M  + + PN VT+  L+ G  +     + V LL +M ++
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK 110



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 5/86 (5%)

Query: 1   MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA R+   M++  G  PN+  YSTLI G C  G +DRAR         GC+ N+ TYN
Sbjct: 410 VDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYN 465

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKG 85
            LI+ + K    E++  L  +M+ +G
Sbjct: 466 LLIDAFRKANRDEDARELLDDMVQRG 491


>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 147/259 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M+++G +PN   YS+L+DG+CL  E+++A+ +F +M   G   ++ +YN 
Sbjct: 235 VKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNI 294

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K  + ++NL+ EM  + I P VVTYN+L  GL +  ++ +ALKL DEM    
Sbjct: 295 LINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY++ +D LCKN    +A  L   L+    +  +  Y+ LI+GLCK G+ E A 
Sbjct: 355 QPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQ 414

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ L   G   NV TY +MIH FCN+G   +A  +   ME  G  PN VT+  ++   
Sbjct: 415 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSL 474

Query: 241 IRNNETSKVVELLHRMDER 259
              +E  K  +LL  M  R
Sbjct: 475 FDKDENDKAEKLLLEMITR 493



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 125/232 (53%)

Query: 27  IDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
           +  FC  G++  A+ +F +M   G   NVVTY++L++GYC  K+V ++ ++++ M   G+
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P + +YN L +G  +I   + A+ LF+EM    +     TYN+ IDGLCK+G I  A +
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L   +        I  YS L+D LCK    + A  L   L   GL PN+ TY I+I+G C
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLC 405

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             G+ + A ++F D+  KG   N  T+  ++     N    + + +L +M+E
Sbjct: 406 KGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEE 457



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 5/208 (2%)

Query: 32  LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
           L G+++  RE FVS      M   +     ++ +CK   V+E+ N+++ M+ KG +P VV
Sbjct: 201 LRGDVNNLRECFVSF-----MFQYLGMMAPVSTFCKEGKVKEAKNVFAAMMKKGFKPNVV 255

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           TY++L  G   + +V  A  +F+ M    V  +  +YN  I+G CK      A  LF  +
Sbjct: 256 TYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEM 315

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
              K    +  Y+ LIDGLCK GK+  A +L   +   G  P+++TY+ ++   C +   
Sbjct: 316 HCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPG 375

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           DKA  L   ++ +G+ PN  T+  L+ G
Sbjct: 376 DKAIALLTKLKDQGLQPNMYTYTILING 403



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 35/225 (15%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  L + M  R + PN   Y++LIDG C +G+I  A +L   M   G   +++TY++L
Sbjct: 306 DAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSL 365

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++  CK    ++++ L +++  +G++P + TY  L +G                      
Sbjct: 366 LDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILING---------------------- 403

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                        LCK G   +A  +F  L V    + +  Y+ +I   C  G    A  
Sbjct: 404 -------------LCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALA 450

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +   +   G +PN VTY I+I    +  + DKA  L L+M  +G+
Sbjct: 451 MLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGL 495



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 73/128 (57%)

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           +   CK G + EA  +F  +     +  +  YS L+DG C + ++  A  +F ++ + G+
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            P++ +YNI+I+GFC     D A +LF +M  + + PN VT+N+L+ G  ++ + S  ++
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345

Query: 252 LLHRMDER 259
           L+  M +R
Sbjct: 346 LVDEMHDR 353


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 148/243 (60%), Gaps = 1/243 (0%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P+   Y+ LIDGFC +G +++A ++   M+   C+ NVVTY++L++G CK  D++++L+
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L+  M SKG  P VVTY TL HGL   H+V+ A  L DEM  +   A+T +YN  +DG C
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP-RVGLMPNV 195
           + G I EA +LF+ +    C      Y+CL+ G C   +LE A  L +++    G+ P+V
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTY+I++ G+    +  +A +   +M A+ VAPN VT+++L+ G  +    +  +E+L  
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKN 425

Query: 256 MDE 258
           +D+
Sbjct: 426 VDK 428



 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 142/264 (53%), Gaps = 4/264 (1%)

Query: 1   MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           MD A  +L  M+ R G+ P+   Y++++DG C  G++DRA E+   M + G   +  T++
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI G+C  + V+E+L LY E+L+   R   V+ + L  GL    ++  A +LF EM+  
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 120 DVAA---ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +  A   +  TY   IDG CK+G + +A ++   +   KC   +  YS L+ GLCK G L
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A +LF+ +   G +PNVVTY  +IHG C   ++D A  L  +M A     + V++N L
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  R     +  +L   M  ++
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKS 324



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 131/230 (56%), Gaps = 4/230 (1%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVE 72
           + V P+   YST+I+GFC  GE+DRA E+   M   +G   +VVTY ++++G C+   ++
Sbjct: 39  KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMD 98

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            +  +  EM  KG+ P   T++ L  G     +V+ ALKL+ E+  S    +  + +  I
Sbjct: 99  RACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALI 158

Query: 133 DGLCKNGYIVEAAELFRTLRVLK---CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            GLC+   I EA ELF+ + + +    +  +  Y+ LIDG CK G LE A ++   +   
Sbjct: 159 TGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGR 218

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +PNVVTY+ ++HG C  G +D+A DLF  M +KG  PN VT+ TL+ G
Sbjct: 219 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHG 268



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 134/250 (53%), Gaps = 5/250 (2%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEES 74
           V PN   Y+ +++G C      +A E+   M D      ++VTY+T+ING+CK  +++ +
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 75  LNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
             +  EM+++ G+ P VVTY ++  GL    +++ A ++  EM+   V  +  T++  I 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV---G 190
           G C    + EA +L++ +    C L   + S LI GLC+  ++  A+ELFQ +       
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+VVTY  +I GFC  G ++KA  +   ME +   PN VT+++L+ G  +  +  + +
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 251 ELLHRMDERN 260
           +L  RM  + 
Sbjct: 245 DLFRRMTSKG 254



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 40/292 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A ++L +M  R   PN   YS+L+ G C  G++D+A +LF  M   GC+ NVVTY T
Sbjct: 205 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 264

Query: 61  LI-----------------------------------NGYCKTKDVEESLNLYSEMLSKG 85
           LI                                   +GYC+   +EE+  L+ EM +K 
Sbjct: 265 LIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKS 324

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HSDVAAETSTYNTFIDGLCKNGYIVEA 144
             P  +TY  L  G     ++E A  L + M+  + +  +  TY+  + G  +    VEA
Sbjct: 325 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 384

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
           AE  + +           YS LIDGLCK G++  A E+ +++ +    P+VVTY I+I G
Sbjct: 385 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEG 440

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            C   + ++A  L  +M  K V P+  TFN+++    R  +  +  +LL  M
Sbjct: 441 LCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 492



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 136/299 (45%), Gaps = 44/299 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYN 59
           ++EA +L   M  +   P+   Y+ L+ GFC    ++ AR L  +M    G   +VVTY+
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA---------- 109
            ++ GY + K   E+     EM+++ + P  VTY++L  GL +  +V HA          
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP 429

Query: 110 ---------------------LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                                L L +EM +  V     T+N+ I  LC+ G + EA +L 
Sbjct: 430 DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 489

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR--------VGLMPNVVTYNI 200
             +     E G+  Y+ L++G  + G++E A+ELF+ + R          L+P    ++ 
Sbjct: 490 VAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE-QAFSA 548

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAP---NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +I G C   ++DKA  +  ++ ++   P   +C+     +L   R  E  K++  + ++
Sbjct: 549 LIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 607



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 46/231 (19%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+  +  MI R V PNA  YS+LIDG C  G ++ A E+  ++D      +VVTY  +I
Sbjct: 383 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVI 438

Query: 63  NGYCKTKDVEESLNLYSEMLSK-----------------------------------GIR 87
            G C T   EE+L L  EM++K                                   G+ 
Sbjct: 439 EGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 498

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST-------YNTFIDGLCKNGY 140
           P +VTY TL  G     ++E A +LF+ M+     + ++        ++  I GLCK   
Sbjct: 499 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKARE 558

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I +A  +   LR  +CE   E    ++DGL + G+ E A +L  S+ +VGL
Sbjct: 559 IDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 150/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   Y+TLIDG CL G++D A +L  SM   G   ++VTY TLI
Sbjct: 332 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 391

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC+   ++++L L+ EM+S G+ P ++TYN +  GLF   +   A +L+  +  S   
Sbjct: 392 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 451

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K G+++ A +L
Sbjct: 452 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 511

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+P+V TY++M       G +++  DLFL ME  G + +    N+++   ++
Sbjct: 512 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 571

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L  +DE++
Sbjct: 572 RGDITRAGTYLFMIDEKH 589



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 147/261 (56%), Gaps = 11/261 (4%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTG--------EIDRARELFVSMDINGC 51
           EA  LL +M      G  P+   Y+T+++GF   G         +D+A E+  +M  NG 
Sbjct: 181 EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGV 240

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           M + +TYN++++GYC +   +E++    +M S G+ P VVTY++L + L +  +   A K
Sbjct: 241 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 300

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           +FD M    +  + +TY T + G CK G ++E+ +LF  +  +  +  I  Y+ LIDG C
Sbjct: 301 IFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 360

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK++ A +L  S+  VG+ P++VTY  +I+G+C   +MD A  LF +M + GV+PN +
Sbjct: 361 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII 420

Query: 232 TFNTLMLGCIRNNETSKVVEL 252
           T+N ++ G      T+   EL
Sbjct: 421 TYNIILQGLFHTRRTAAAKEL 441



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L+ M++ GV P+   Y++++ G+C +G+   A      M  +G   NVVTY++
Sbjct: 225 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 284

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK     E+  ++  M  +G+ P + TY TL  G  +  +V  + KLFD M    
Sbjct: 285 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIG 344

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYNT IDG C  G + EA +L  ++  +  +  I  Y  LI+G C++ +++ A 
Sbjct: 345 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 404

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ PN++TYNI++ G  +  +   A +L++ +   G      T+N ++ G 
Sbjct: 405 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 464

Query: 241 IRNNETSKVVELLHRM 256
            +NN T + + +   +
Sbjct: 465 CKNNLTDEALRMFQNL 480



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 107/214 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA++LL  M+  GV+P+   Y TLI+G+C    +D A  LF  M  +G   N++TYN 
Sbjct: 365 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 424

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G   T+    +  LY  +   G +  + TYN + HGL + +  + AL++F  +  +D
Sbjct: 425 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 484

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ET T+N  I  L K G + EA +LF           +  YS + + L + G LE   
Sbjct: 485 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 544

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           +LF S+   G   +    N ++      G + +A
Sbjct: 545 DLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 47/288 (16%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P    Y+ LI   C  G +D       ++   G   + +T+  L+ G C  K   +++
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 76  NL----------------YSEML-----------------------SKGIRPTVVTYNTL 96
           ++                Y+ +L                         G  P VV+YNT+
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 97  FHGLFE--------IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            +G F+           ++ A+++ + M  + V  +  TYN+ + G C +G   EA    
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           + +R    E  +  YS L++ LCK G+   A ++F S+ + GL P++ TY  ++ G C +
Sbjct: 268 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKE 327

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G++ ++  LF  M   GV P+ +T+NTL+ GC    +  +  +LL  M
Sbjct: 328 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375



 Score = 38.5 bits (88), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 4/130 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA R+   +    ++     ++ +I      G +D A++LF +   NG + +V TY+ +
Sbjct: 471 DEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLM 530

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA---LKLFDEMQH 118
                +   +EE  +L+  M   G        N++   L +   +  A   L + DE +H
Sbjct: 531 AENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE-KH 589

Query: 119 SDVAAETSTY 128
             + A T+++
Sbjct: 590 FSLEASTASF 599


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 153/258 (59%), Gaps = 2/258 (0%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA +L  +++     +P+   Y+ LIDGFC +G +++A ++   M+   C+ NVVTY+
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 223

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +L++G CK  D++++L+L+  M SKG  P VVTY TL HGL   H+V+ A  L DEM  +
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 283

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +T +YN  +DG C+ G I EA +LF+ +    C      Y+CL+ G C   +LE A
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA 343

Query: 180 WELFQSLP-RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             L +++    G+ P+VVTY+I++ G+    +  +A +   +M A+ VAPN VT+++L+ 
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 403

Query: 239 GCIRNNETSKVVELLHRM 256
           G  +       +E+L  M
Sbjct: 404 GLCKAGRVDHAMEVLKNM 421



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 135/249 (54%), Gaps = 2/249 (0%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVE 72
           + V P+   YST+I+GFC  GE+DRA E+   M   +G   +VVTY ++++G C+   ++
Sbjct: 71  KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMD 130

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE-MQHSDVAAETSTYNTF 131
            +  +  EM  KG+ P   T++ L  G     +V+ ALKL+ E +  S    +  TY   
Sbjct: 131 RACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTAL 190

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDG CK+G + +A ++   +   KC   +  YS L+ GLCK G L+ A +LF+ +   G 
Sbjct: 191 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 250

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +PNVVTY  +IHG C   ++D A  L  +M A    P+ V++N L+ G  R     +  +
Sbjct: 251 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQ 310

Query: 252 LLHRMDERN 260
           L   M  ++
Sbjct: 311 LFKEMATKS 319



 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 132/241 (54%), Gaps = 2/241 (0%)

Query: 1   MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           MD A  +L  M+ R G+ P+   Y++++DG C  G++DRA E+   M + G   +  T++
Sbjct: 93  MDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 152

Query: 60  TLINGYCKTKDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
            LI G+C  + V+E+L LY E+L S   +P VVTY  L  G  +   +E A+K+   M+ 
Sbjct: 153 ALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 212

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                   TY++ + GLCK G + +A +LFR +    C   +  Y+ LI GLC   K++ 
Sbjct: 213 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 272

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  L   +      P+ V+YN ++ G+C  G++++A  LF +M  K   P+ +T+  L+ 
Sbjct: 273 ARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVR 332

Query: 239 G 239
           G
Sbjct: 333 G 333



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 10/268 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L+D M      P+   Y+ L+DG+C  G I+ A++LF  M    C+ + +TY  
Sbjct: 270 VDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTC 329

Query: 61  LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L+ G+C    +EE+  L   M  + GI P VVTY+ +  G     +   A +   EM   
Sbjct: 330 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 389

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +VA    TY++ IDGLCK G +  A E+ + +   + E  +  ++ +I  LC++G ++ A
Sbjct: 390 NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEA 449

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME--------AKGVAPNCV 231
           W+L  ++   GL P +VTY  ++ GF   G+M+ A++LF  M         A  + P   
Sbjct: 450 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPE-Q 508

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
            F+ L+ G  +  E  K + ++  +  R
Sbjct: 509 AFSALIRGLCKAREIDKAMAVVEELRSR 536



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 127/227 (55%), Gaps = 3/227 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEES 74
           V PN   Y+ +++G C      +A E+   M D      ++VTY+T+ING+CK  +++ +
Sbjct: 37  VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 96

Query: 75  LNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
             +  EM+++ GI P VVTY ++  GL    +++ A ++  EM+   V  +  T++  I 
Sbjct: 97  CEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 156

Query: 134 GLCKNGYIVEAAELFR-TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           G C    + EA +L++  L     +  +  Y+ LIDG CK G LE A ++   +     +
Sbjct: 157 GWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCV 216

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           PNVVTY+ ++HG C  G +D+A DLF  M +KG  PN VT+ TL+ G
Sbjct: 217 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHG 263



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 131/247 (53%), Gaps = 4/247 (1%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P    ++ +IDGFC   ++ +A   F  M       N  TYN ++NG CK +   ++  
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 77  LYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFIDG 134
           +  EM   K + P +VTY+T+ +G  +  +++ A ++  EM   D +A +  TY + +DG
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS-LPRVGLMP 193
           LC++G +  A E+ R +++   E     +S LI G C   K++ A +L++  L      P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VVTY  +I GFC  G ++KA  +   ME +   PN VT+++L+ G  +  +  + ++L 
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 254 HRMDERN 260
            RM  + 
Sbjct: 243 RRMTSKG 249



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 7/196 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+  +  MI R V PNA  YS+LIDG C  G +D A E+  +M       +V T+N++I
Sbjct: 378 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVI 437

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C+  D++E+  L   M + G+ P +VTY TL  G     ++E A +LF+ M+     
Sbjct: 438 GALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKK 497

Query: 123 -------AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
                       ++  I GLCK   I +A  +   LR  +CE   E    ++DGL + G+
Sbjct: 498 SSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGR 557

Query: 176 LETAWELFQSLPRVGL 191
            E A +L  S+ +VGL
Sbjct: 558 TEEAGKLINSISKVGL 573



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 63/108 (58%), Gaps = 2/108 (1%)

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           ++C+  +  ++ +IDG CK  +L+ A   F+ + R  + PN  TYN++++G C      K
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSK 59

Query: 214 AHDLFLDM-EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           A+++  +M + K VAP+ VT++T++ G  +  E  +  E+L  M  R+
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRD 107


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/253 (39%), Positives = 143/253 (56%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL ++  R  RP+  +YST+IDG C    +++A + F  M+  G   NV+TY+TLI 
Sbjct: 189 AVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIW 248

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    +  + +L +EM+ K I P V TYN L   L +  +V+ A KL  EM H    A
Sbjct: 249 GFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPA 308

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ +DGLCK+  + +A  LF  ++    +     Y+ LIDGLCK G+L+ A +LF
Sbjct: 309 DVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLF 368

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q L   G   +V TYN+MI G C +G  DKA  +   ME  G  PN VTF+ ++      
Sbjct: 369 QHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEK 428

Query: 244 NETSKVVELLHRM 256
           +E  K  +LLH M
Sbjct: 429 DENDKAEKLLHGM 441



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 119/226 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A      M  RG+ PN   YSTLI GFCL G++  A  L   M +     NV TYN 
Sbjct: 221 VNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNI 280

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V+E+  L +EM  KG    VVTYN++  GL +   ++ A  LF +M+   
Sbjct: 281 LIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWG 340

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   IDGLCK G +  A +LF+ L V  C + +  Y+ +I GLCK G  + A 
Sbjct: 341 IQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKAL 400

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            +   +   G +PN VT++I+I       + DKA  L   M AKG+
Sbjct: 401 AMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 127/245 (51%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G+ PN    + LI+ FC  G++  +  +   +   G   + +T NTL+ G C   +V+ 
Sbjct: 94  KGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKR 153

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           SL+ + +++++G +   V+Y TL +GL +I +   A+KL   ++      +   Y+T ID
Sbjct: 154 SLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIID 213

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLCK+  + +A + F  +        +  YS LI G C  G+L  A+ L   +    + P
Sbjct: 214 GLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINP 273

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV TYNI+I   C +G++ +A  L  +M  KG   + VT+N+++ G  ++    K   L 
Sbjct: 274 NVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALF 333

Query: 254 HRMDE 258
            +M +
Sbjct: 334 MKMKK 338



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A  L   M++ G   N+VT N LIN +C    +  S ++  ++L  G +P  +T NTL  
Sbjct: 84  AISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMK 143

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           GL    +V+ +L   D++          +Y T ++GLCK G    A +L R +       
Sbjct: 144 GLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP 203

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  YS +IDGLCK   +  A++ F  +   G+ PNV+TY+ +I GFC  GQ+  A  L 
Sbjct: 204 DVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLL 263

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +M  K + PN  T+N L+    +  +  +  +LL  M  +
Sbjct: 264 NEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHK 304



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 103/206 (50%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           ++ +  ++    K K    +++L  +M  KGI P +VT N L +    + Q+  +  +  
Sbjct: 65  IIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLG 124

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++       +T T NT + GLC  G +  +      +     ++   +Y  L++GLCKIG
Sbjct: 125 KILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 184

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +   A +L + +      P+VV Y+ +I G C D  +++A+D F +M A+G+ PN +T++
Sbjct: 185 ETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYS 244

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
           TL+ G     +      LL+ M  +N
Sbjct: 245 TLIWGFCLAGQLMGAFSLLNEMILKN 270



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%)

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  L +++    I  +  ++  L K+    TA  L + +   G+ PN+VT NI+I+ FC+
Sbjct: 53  FNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCH 112

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            GQM  +  +   +   G  P+ +T NTLM G     E  +
Sbjct: 113 LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKR 153


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  183 bits (465), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 150/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   Y+TLIDG CL G++D A +L  SM   G   ++VTY TLI
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC+   ++++L L+ EM+S G+ P ++TYN +  GLF   +   A +L+  +  S   
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K G+++ A +L
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+P+V TY++M       G +++  DLFL ME  G + +    N+++   ++
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 738

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L  +DE++
Sbjct: 739 RGDITRAGTYLFMIDEKH 756



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 145/250 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G++P+  V++ LI  +    ++D+A  +F  M  +G   NVV Y T+I
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK+  V++++  + +M+ +G+ P ++ Y +L HGL    + + A +L  EM    + 
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T  +N+ ID  CK G ++E+ +LF  +  +  +  I  Y+ LIDG C  GK++ A +L
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+  VG+ P++VTY  +I+G+C   +MD A  LF +M + GV+PN +T+N ++ G   
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598

Query: 243 NNETSKVVEL 252
              T+   EL
Sbjct: 599 TRRTAAAKEL 608



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 132/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M Q G+ PN   Y T+ID  C +G +D A   F  M   G   N++ Y +
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C     +++  L  EML +GI    + +N++     +  +V  + KLFD M    
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYNT IDG C  G + EA +L  ++  +  +  I  Y  LI+G C++ +++ A 
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ PN++TYNI++ G  +  +   A +L++ +   G      T+N ++ G 
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 241 IRNNETSKVVELLHRM 256
            +NN T + + +   +
Sbjct: 632 CKNNLTDEALRMFQNL 647



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 131/258 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A      M+ RG+ P+   YS++I   C    +D+A E+  +M  NG M + +TYN++
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC +   +E++    +M S G+ P VVTY++L + L +  +   A K+FD M    +
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             + +TY T + G    G +VE   L   +     +     ++ LI    K  K++ A  
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + + GL PNVV Y  +I   C  G +D A   F  M  +G+ PN + + +L+ G  
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457

Query: 242 RNNETSKVVELLHRMDER 259
             ++  K  EL+  M +R
Sbjct: 458 TCDKWDKAEELILEMLDR 475



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 133/260 (51%), Gaps = 3/260 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTY 58
           D    +L  M + G  P+ F Y+ L+ G C       A EL   M  +   G   +VV+Y
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           NT++NG+ K  D +++ + Y EML +GI P VVTY+++   L +   ++ A+++ + M  
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + V  +  TYN+ + G C +G   EA    + +R    E  +  YS L++ LCK G+   
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A ++F S+ + GL P++ TY  ++ G+   G + + H L   M   G+ P+   FN L+ 
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 239 GCIRNNETSKVVELLHRMDE 258
              +  +  + + +  +M +
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQ 404



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 130/259 (50%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L+ M++ GV P+   Y++++ G+C +G+   A      M  +G   NVVTY++
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK     E+  ++  M  +G+ P + TY TL  G      +     L D M  + 
Sbjct: 312 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG 371

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +N  I    K   + +A  +F  +R       +  Y  +ID LCK G ++ A 
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +   GL PN++ Y  +IHG C   + DKA +L L+M  +G+  N + FN+++   
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491

Query: 241 IRNN---ETSKVVELLHRM 256
            +     E+ K+ +L+ R+
Sbjct: 492 CKEGRVIESEKLFDLMVRI 510



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  G+ PN  VY++LI G C   + D+A EL + M   G   N + +N+
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P ++TYNTL  G     +++ A KL   M    
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY T I+G C+   + +A  LF+ +        I  Y+ ++ GL    +   A 
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND-------------------------------- 208
           EL+ S+ + G    + TYNI++HG C +                                
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666

Query: 209 ---GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
              G+MD+A DLF    A G+ P+  T++ +    I      ++ +L   M+E
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 122/238 (51%), Gaps = 3/238 (1%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           EA  LL +M      G  P+   Y+T+++GF   G+ D+A   +  M   G + +VVTY+
Sbjct: 181 EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYS 240

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++I   CK + +++++ + + M+  G+ P  +TYN++ HG     Q + A+    +M+  
Sbjct: 241 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 300

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V     TY++ ++ LCKNG   EA ++F ++     E  I  Y  L+ G    G L   
Sbjct: 301 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM 360

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             L   + R G+ P+   +NI+I  +    ++D+A  +F  M   G+ PN V + T++
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 107/214 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA++LL  M+  GV+P+   Y TLI+G+C    +D A  LF  M  +G   N++TYN 
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G   T+    +  LY  +   G +  + TYN + HGL + +  + AL++F  +  +D
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ET T+N  I  L K G + EA +LF           +  YS + + L + G LE   
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 711

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           +LF S+   G   +    N ++      G + +A
Sbjct: 712 DLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 4/248 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P    Y+ LI   C  G +D       ++   G   + +T+  L+ G C  K   +++
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 76  NLY-SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHSDVAAETSTYNTF 131
           ++    M   G  P V +YN L  GL + ++ + AL+L   M   +      +  +YNT 
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           ++G  K G   +A   +  +        +  YS +I  LCK   ++ A E+  ++ + G+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           MP+ +TYN ++HG+C+ GQ  +A      M + GV PN VT+++LM    +N  +++  +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 252 LLHRMDER 259
           +   M +R
Sbjct: 328 IFDSMTKR 335



 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 4/130 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA R+   +    ++     ++ +I      G +D A++LF +   NG + +V TY+ +
Sbjct: 638 DEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLM 697

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA---LKLFDEMQH 118
                +   +EE  +L+  M   G        N++   L +   +  A   L + DE +H
Sbjct: 698 AENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE-KH 756

Query: 119 SDVAAETSTY 128
             + A T+++
Sbjct: 757 FSLEASTASF 766


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  183 bits (465), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 150/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   Y+TLIDG CL G++D A +L  SM   G   ++VTY TLI
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC+   ++++L L+ EM+S G+ P ++TYN +  GLF   +   A +L+  +  S   
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K G+++ A +L
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+P+V TY++M       G +++  DLFL ME  G + +    N+++   ++
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 738

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L  +DE++
Sbjct: 739 RGDITRAGTYLFMIDEKH 756



 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 145/250 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G++P+  V++ LI  +    ++D+A  +F  M  +G   NVV Y T+I
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK+  V++++  + +M+ +G+ P ++ Y +L HGL    + + A +L  EM    + 
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T  +N+ ID  CK G ++E+ +LF  +  +  +  I  Y+ LIDG C  GK++ A +L
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+  VG+ P++VTY  +I+G+C   +MD A  LF +M + GV+PN +T+N ++ G   
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598

Query: 243 NNETSKVVEL 252
              T+   EL
Sbjct: 599 TRRTAAAKEL 608



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 132/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M Q G+ PN   Y T+ID  C +G +D A   F  M   G   N++ Y +
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C     +++  L  EML +GI    + +N++     +  +V  + KLFD M    
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYNT IDG C  G + EA +L  ++  +  +  I  Y  LI+G C++ +++ A 
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ PN++TYNI++ G  +  +   A +L++ +   G      T+N ++ G 
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 241 IRNNETSKVVELLHRM 256
            +NN T + + +   +
Sbjct: 632 CKNNLTDEALRMFQNL 647



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 131/258 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A      M+ RG+ P+   YS++I   C    +D+A E+  +M  NG M + +TYN++
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC +   +E++    +M S G+ P VVTY++L + L +  +   A K+FD M    +
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             + +TY T + G    G +VE   L   +     +     ++ LI    K  K++ A  
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + + GL PNVV Y  +I   C  G +D A   F  M  +G+ PN + + +L+ G  
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457

Query: 242 RNNETSKVVELLHRMDER 259
             ++  K  EL+  M +R
Sbjct: 458 TCDKWDKAEELILEMLDR 475



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 132/255 (51%), Gaps = 3/255 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTYNTLIN 63
           +L  M + G  P+ F Y+ L+ G C       A EL   M  +   G   +VV+YNT++N
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+ K  D +++ + Y EML +GI P VVTY+++   L +   ++ A+++ + M  + V  
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ + G C +G   EA    + +R    E  +  YS L++ LCK G+   A ++F
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            S+ + GL P++ TY  ++ G+   G + + H L   M   G+ P+   FN L+    + 
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 244 NETSKVVELLHRMDE 258
            +  + + +  +M +
Sbjct: 390 EKVDQAMLVFSKMRQ 404



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 130/259 (50%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L+ M++ GV P+   Y++++ G+C +G+   A      M  +G   NVVTY++
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK     E+  ++  M  +G+ P + TY TL  G      +     L D M  + 
Sbjct: 312 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG 371

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +N  I    K   + +A  +F  +R       +  Y  +ID LCK G ++ A 
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +   GL PN++ Y  +IHG C   + DKA +L L+M  +G+  N + FN+++   
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491

Query: 241 IRNN---ETSKVVELLHRM 256
            +     E+ K+ +L+ R+
Sbjct: 492 CKEGRVIESEKLFDLMVRI 510



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  G+ PN  VY++LI G C   + D+A EL + M   G   N + +N+
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P ++TYNTL  G     +++ A KL   M    
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY T I+G C+   + +A  LF+ +        I  Y+ ++ GL    +   A 
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND-------------------------------- 208
           EL+ S+ + G    + TYNI++HG C +                                
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666

Query: 209 ---GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
              G+MD+A DLF    A G+ P+  T++ +    I      ++ +L   M+E
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 122/238 (51%), Gaps = 3/238 (1%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           EA  LL +M      G  P+   Y+T+++GF   G+ D+A   +  M   G + +VVTY+
Sbjct: 181 EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYS 240

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++I   CK + +++++ + + M+  G+ P  +TYN++ HG     Q + A+    +M+  
Sbjct: 241 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 300

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V     TY++ ++ LCKNG   EA ++F ++     E  I  Y  L+ G    G L   
Sbjct: 301 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM 360

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             L   + R G+ P+   +NI+I  +    ++D+A  +F  M   G+ PN V + T++
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 107/214 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA++LL  M+  GV+P+   Y TLI+G+C    +D A  LF  M  +G   N++TYN 
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G   T+    +  LY  +   G +  + TYN + HGL + +  + AL++F  +  +D
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ET T+N  I  L K G + EA +LF           +  YS + + L + G LE   
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 711

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           +LF S+   G   +    N ++      G + +A
Sbjct: 712 DLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 4/248 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P    Y+ LI   C  G +D       ++   G   + +T+  L+ G C  K   +++
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 76  NLY-SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHSDVAAETSTYNTF 131
           ++    M   G  P V +YN L  GL + ++ + AL+L   M   +      +  +YNT 
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           ++G  K G   +A   +  +        +  YS +I  LCK   ++ A E+  ++ + G+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           MP+ +TYN ++HG+C+ GQ  +A      M + GV PN VT+++LM    +N  +++  +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 252 LLHRMDER 259
           +   M +R
Sbjct: 328 IFDSMTKR 335



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 4/130 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA R+   +    ++     ++ +I      G +D A++LF +   NG + +V TY+ +
Sbjct: 638 DEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLM 697

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA---LKLFDEMQH 118
                +   +EE  +L+  M   G        N++   L +   +  A   L + DE +H
Sbjct: 698 AENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE-KH 756

Query: 119 SDVAAETSTY 128
             + A T+++
Sbjct: 757 FSLEASTASF 766


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  183 bits (464), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 145/261 (55%), Gaps = 4/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+L  M+   + P+   Y++L++G C  G +D AR L V     G   NV+TY+T
Sbjct: 171 LDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYST 227

Query: 61  LINGYCKT-KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G C+  + +E +  L  +M+  G +P +V+YN L HGL     V  ALKLF  +   
Sbjct: 228 LISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ 287

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               E  TYN  IDGL K   + EA ELF  L     E     Y+  IDGLCK G++E A
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 347

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             + + +   G +P+VV++N +I+G C + ++D+A  L   MEAKG +PN ++FNTL+ G
Sbjct: 348 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 407

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R  +  K +     M +R 
Sbjct: 408 QCRAGKWKKAMTTFKEMLKRG 428



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 135/249 (54%), Gaps = 1/249 (0%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLT-GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           L++ +G  PN   YSTLI G C     ++ AR+L   M +NGC  ++V+YN LI+G  + 
Sbjct: 212 LIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLARE 271

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           + V E+L L+  +L +G  P V TYN L  GL +  +V  A +LF  +    +  +  TY
Sbjct: 272 QGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITY 331

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
             FIDGLCK G + +A  + + +    C   + +++ +I+GLCK  +++ A  L   +  
Sbjct: 332 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 391

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  PN +++N +I G C  G+  KA   F +M  +GV P  VT+N L+ G  +  +  +
Sbjct: 392 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 451

Query: 249 VVELLHRMD 257
           + E +   D
Sbjct: 452 IKEAITLFD 460



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 147/293 (50%), Gaps = 33/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  L + MI+ G  P+   Y+TL+ GFC  G++D A ++F      G + +VVTYN 
Sbjct: 101 MSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNA 160

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL-------------------- 100
           LING+CK   ++E+  +   M+S+ + P VVTYN+L +GL                    
Sbjct: 161 LINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSP 220

Query: 101 -------------FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                         E+ ++E A +L ++M  +    +  +YN  I GL +   + EA +L
Sbjct: 221 NVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKL 280

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F ++     E  +  Y+ LIDGL K  ++  A+ELF  L + GL P+ +TY + I G C 
Sbjct: 281 FGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 340

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G+++ A  +  DM+ KG  P+ V+ N ++ G  +     +   LL  M+ + 
Sbjct: 341 AGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 140/258 (54%), Gaps = 12/258 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + D M + G  PN   Y+ L+ G C  G +  A+ L+  M   G   +VVTYNT
Sbjct: 66  IGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNT 125

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   ++E+L ++   + +G  P VVTYN L +G  +  +++ A ++   M    
Sbjct: 126 LLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES 185

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCK-IGK 175
           +  +  TYN+ ++GLCKNG + EA       R+L  + G       YS LI GLC+ + +
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEA-------RMLIVDKGFSPNVITYSTLISGLCRELRR 238

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           LE+A +L + +   G  P++V+YN +IHG   +  + +A  LF  +  +G  P   T+N 
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298

Query: 236 LMLGCIRNNETSKVVELL 253
           L+ G ++ +  ++  EL 
Sbjct: 299 LIDGLLKEDRVNEAFELF 316



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 133/257 (51%), Gaps = 3/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +L  M ++G  P+   ++ +I+G C    +D A  L   M+  GC  N +++NT
Sbjct: 344 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ---VEHALKLFDEMQ 117
           LI G C+    ++++  + EML +G++PTVVTYN L  GL +  Q   ++ A+ LFD M 
Sbjct: 404 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                 +  TY+  IDGL K G + +A  L   +    C   +  Y+ LI GLC + K++
Sbjct: 464 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVD 523

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A ELF ++   G +P+ +TY  +I   C    +DKA  LF      GV P    + +L+
Sbjct: 524 EALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLI 583

Query: 238 LGCIRNNETSKVVELLH 254
            G        + ++LL 
Sbjct: 584 DGLCAVARVDEALKLLQ 600



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 139/263 (52%), Gaps = 3/263 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +L   ++++G  P    Y+ LIDG      ++ A ELF  +  +G   + +TY  
Sbjct: 274 VSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G CK   VE++L +  +M  KG  P VV++N + +GL +  +V+ A  L   M+   
Sbjct: 334 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI---GKLE 177
            +    ++NT I G C+ G   +A   F+ +     +  +  Y+ L+DGLCK    G+++
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  LF ++   G +P+VVTY+ +I G    G++D A  L   MEAKG  PN  T+N+L+
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G    ++  + +EL   M E+ 
Sbjct: 514 SGLCGLDKVDEALELFVAMVEKG 536



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 131/254 (51%), Gaps = 5/254 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R ++ ++ +G+  +   ++  I G C    I  A+ +F  M  +G   N +TYN 
Sbjct: 32  IEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNA 90

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C    + ++  LY  M+  G  P VVTYNTL HG  ++ +++ ALK+FD      
Sbjct: 91  LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRG 150

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  I+G CK   + EA  + + +        +  Y+ L++GLCK G+++ A 
Sbjct: 151 FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR 210

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND-GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L       G  PNV+TY+ +I G C +  +++ A  L   M   G  P+ V++N L+ G
Sbjct: 211 MLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHG 267

Query: 240 CIRNNETSKVVELL 253
             R    S+ ++L 
Sbjct: 268 LAREQGVSEALKLF 281



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 1/197 (0%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           T   L+    K+  +E++     ++L KG+   + T+N    GL    ++  A  +FD M
Sbjct: 18  TVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGM 76

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +         TYN  + GLC  G + +A  L+  +        +  Y+ L+ G CK+GKL
Sbjct: 77  RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKL 136

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A ++F    + G +P+VVTYN +I+GFC   ++D+A  +   M ++ + P+ VT+N+L
Sbjct: 137 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSL 196

Query: 237 MLGCIRNNETSKVVELL 253
           + G  +N    +   L+
Sbjct: 197 VNGLCKNGRVDEARMLI 213



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 1/169 (0%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P   T   L   L +  ++E A +  +++    +  + ST+N +I GLC+   I +A  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +R          Y+ L+ GLC  G++  A  L++ + + G  P+VVTYN ++HGFC 
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G++D+A  +F     +G  P+ VT+N L+ G  + ++  +   +L RM
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  182 bits (463), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 149/259 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M+++ ++P+   YS+L+DG+CL  E+++A  +F +M   G   NV +YN 
Sbjct: 419 IKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNI 478

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK K V+E++ L+ EM  K I P V+TY++L  GL +  ++ +AL+L DEM +  
Sbjct: 479 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRG 538

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN+ +D LCK  ++ +A  L   L+       +  Y+ L+ GLC+ GKLE A 
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ L   G   +V  Y +MI GFC+ G  D+A  L   ME  G  P+  T+  ++L  
Sbjct: 599 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 658

Query: 241 IRNNETSKVVELLHRMDER 259
              +E     +LL  M  R
Sbjct: 659 FEKDENDMAEKLLREMIMR 677



 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 141/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    D +I  G   +   Y TLI+G C  GE   A EL    D      +VV YNT+I
Sbjct: 281 QALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTII 340

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK K V ++ +LYSE +SK I P V TYN L  G   + +++ A+ LF++M   ++ 
Sbjct: 341 DGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNII 400

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T++  +DG CK+G I EA  +   +     +  +  YS L+DG C + ++  A  +
Sbjct: 401 PDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESI 460

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G+  NV +YNIMI+GFC    +D+A  LF +M  K + P+ +T+++L+ G  +
Sbjct: 461 FNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCK 520

Query: 243 NNETSKVVELLHRMDER 259
           +   S  +EL+  M  R
Sbjct: 521 SGRISYALELVDEMHYR 537



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 136/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L    + + + P+ F Y+ LI GFC+ G++  A +LF  M     + +V T++ 
Sbjct: 349 VNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSI 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK  +++E+ N+ + M+ + I+P VVTY++L  G   +++V  A  +F+ M H  
Sbjct: 409 LVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   +YN  I+G CK   + EA +LF+ +   +    +  YS LIDGLCK G++  A 
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           EL   +   G  P+++TYN ++   C    +DKA  L   ++ +G+ P+  T+  L+ G
Sbjct: 529 ELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKG 587



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 139/258 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + M  + + P+ + +S L+DGFC  G I  A+ +   M       +VVTY++
Sbjct: 384 LKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSS 443

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC   +V ++ ++++ M  +G+   V +YN + +G  +I  V+ A+KLF EM H  
Sbjct: 444 LMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ IDGLCK+G I  A EL   +     +  I  Y+ ++D LCK   ++ A 
Sbjct: 504 IFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAI 563

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   L   G+ P++ TY I++ G C  G+++ A  +F D+  KG   +   +  ++ G 
Sbjct: 564 TLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623

Query: 241 IRNNETSKVVELLHRMDE 258
                  + + LL +M+E
Sbjct: 624 CDKGLFDEALALLSKMEE 641



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 133/241 (55%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+P+  +Y+T+IDG C    ++ A +L+          +V TYN LI+G+C    +++++
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           +L+++M SK I P V T++ L  G  +   ++ A  +   M    +  +  TY++ +DG 
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C    + +A  +F T+        +++Y+ +I+G CKI  ++ A +LF+ +    + P+V
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           +TY+ +I G C  G++  A +L  +M  +G  P+ +T+N+++    + +   K + LL +
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568

Query: 256 M 256
           +
Sbjct: 569 L 569



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 120/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + M  RGV  N   Y+ +I+GFC    +D A +LF  M       +V+TY++
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+  +  +L L  EM  +G +P ++TYN++   L + H V+ A+ L  +++   
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  + +TY   + GLC++G + +A ++F  L V    L + AY+ +I G C  G  + A 
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   +   G +P+  TY I+I       + D A  L  +M  +G+
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 97/192 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L   M  + + P+   YS+LIDG C +G I  A EL   M   G   +++TYN+
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK   V++++ L +++  +GIRP + TY  L  GL +  ++E A K+F+++    
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y   I G C  G   EA  L   +    C    + Y  +I  L +  + + A 
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668

Query: 181 ELFQSLPRVGLM 192
           +L + +   GL+
Sbjct: 669 KLLREMIMRGLL 680



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 1/200 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYS-EMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           + T I   C  K  E S+     ++L  G  P  +T  T   G     Q+  AL   D++
Sbjct: 230 HKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKV 289

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                  +  +Y T I+GLCK G    A EL R       +  +  Y+ +IDG+CK   +
Sbjct: 290 IAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHV 349

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A++L+       + P+V TYN +I GFC  G++  A DLF  M +K + P+  TF+ L
Sbjct: 350 NDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSIL 409

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G  ++    +   +L  M
Sbjct: 410 VDGFCKDGNIKEAKNVLAMM 429



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%)

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T T  TFI G C  G I +A      +  +   L   +Y  LI+GLCK+G+ + A EL
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +      + P+VV YN +I G C D  ++ A DL+ +  +K + P+  T+N L+ G   
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 243 NNETSKVVELLHRMDERN 260
             +    ++L ++M  +N
Sbjct: 381 VGKLKDAIDLFNKMTSKN 398


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  182 bits (463), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 147/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++L  M ++G+ P+   Y+ LIDG+C  G ID A E+   M+ N C  N  TYN 
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK + V +++ L ++ML + + P+++TYN+L HG  +++ +E A +L   M  + 
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+ FID LCK G + EA  LF +++    +     Y+ LIDG CK+GK++ A+
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +     +PN  TYN++I G C + +M +A  L   M   GV P  VT+  L+   
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589

Query: 241 IRNNETSKVVELLHRM 256
           +++      +++ + M
Sbjct: 590 LKDGAFDHALKVFNHM 605



 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 142/261 (54%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           +DE   +   ++   + PN + ++ +++G+C  G +  A EL+ S  +   +H +  TY 
Sbjct: 175 IDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA-ELYASKIVQAGLHPDTFTYT 233

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI G+C+ K V+ +  ++  M  KG +   V+Y  L HGL E  ++  ALKLF +M   
Sbjct: 234 SLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED 293

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +      TY   I  L  +G  VEA  LF  ++   CE  +  Y+ LIDGLCK  K++ A
Sbjct: 294 NCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEA 353

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++   +   GL+P+VVTYN +I G+C +G +D A ++   ME+    PN  T+N L+ G
Sbjct: 354 RKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICG 413

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +  +  K + LL++M ER 
Sbjct: 414 LCKKRKVHKAMALLNKMLERK 434



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 130/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA      ++Q G+ P+ F Y++LI G C    +D A E+F+ M   GC  N V+Y  LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+L L+++M      PTV TY  L + L    +   AL LF+EM+     
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDGLCK   + EA ++   +        +  Y+ LIDG CK G ++ A+E+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +      PN  TYN +I G C   ++ KA  L   M  + ++P+ +T+N+L+ G  +
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451

Query: 243 NNETSKVVELLHRMDE 258
            N+      LL  M+E
Sbjct: 452 VNDLESAYRLLSLMNE 467



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L   M +    P    Y+ LI     +G    A  LF  M   GC  NV TY  
Sbjct: 280 INEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTV 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   ++E+  + SEM  KG+ P+VVTYN L  G  +   ++ A ++ D M+ + 
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYN  I GLCK   + +A  L   +   K    +  Y+ LI G CK+  LE+A+
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL+P+  TY++ I   C +G++++A  LF  ++AKGV  N V +  L+ G 
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL RM
Sbjct: 520 CKVGKIDVAYSLLERM 535



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL+ M++R + P+   Y++LI G C   +++ A  L   M+ NG + +  TY+  I
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   VEE+  L+  + +KG++   V Y  L  G  ++ +++ A  L + M +    
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + TYN  I+GLCK   + EA+ L   +  +  +  +  Y+ LI  + K G  + A ++
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +  +G  P+V TY   +H + + G +++  D+   M  +G+ P+ VT+  L+ G  R
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 243 NNETSKVVELLHRM 256
              T +  + L  M
Sbjct: 662 LGLTHRAFDFLKCM 675



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 111/237 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A RLL LM + G+ P+ + YS  ID  C  G ++ A  LF S+   G   N V Y  
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK   ++ + +L   ML+    P   TYN L  GL +  +++ A  L  +M    
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   I  + K+G    A ++F  +  L  +  +  Y+  +      G LE   
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++   +   G++P++VTY ++I G+   G   +A D    M   G  P+    + L+
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 125/288 (43%), Gaps = 29/288 (10%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A ++ + M+  G +P+   Y+  +  +   G ++   ++   M+  G + ++VTY  L
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL--------------------- 100
           I+GY +      + +    M+  G +P++   + L   L                     
Sbjct: 656 IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNV 715

Query: 101 --------FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
                   ++  + E ALKLF++M       + S Y   I G C+   + EA  L   ++
Sbjct: 716 NSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK 775

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                   + Y+ L+D  CK+G    A  L  ++   GL+P + +Y +++ G   +G  +
Sbjct: 776 ERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNE 835

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           KA  +F  + + G   + V +  L+ G ++ +   +  EL+  M+E++
Sbjct: 836 KAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKD 883



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 60/125 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L+  M +RG+ P+  +Y++L+D  C  G    A  L  +M  NG +  + +Y  
Sbjct: 764 LEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKL 823

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G       E++  ++  +LS G     V +  L  GL +   V+   +L D M+  D
Sbjct: 824 LVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKD 883

Query: 121 VAAET 125
             A+ 
Sbjct: 884 ATAQA 888


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  182 bits (463), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 145/258 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   ++  GV P+   Y++LI G C+    D ARELF  M+  GC  + VTYN 
Sbjct: 26  LNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK   +EE+ +L  +M+  G  P VVTYNT+  GL +  +VE AL LF+EM+   
Sbjct: 86  IIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLG 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 ++NT I GLC+   I +A ++F  +          +Y  LIDGL K GKL  A+
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAY 205

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G+ P+ VTYN++IHG C    +D+A +LF  M +KG  P+  TFN L+   
Sbjct: 206 KLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH 265

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +  +   LL RM +
Sbjct: 266 CKRGKMDEAFRLLKRMTD 283



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 141/258 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M  +G RP+ F ++ LID  C  G++D A  L   M  +G + +VVTY+T
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    V+++ +L  +M+ +  +PTVVT NTL HGL +  +++ A ++ D M  S 
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYNT + G C+ G    A EL   +        +  Y+ L+ GLCK  +L  A 
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G  PN+ TY  +I GFC+ GQ+D    LF +M   G++P+ V + TL    
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475

Query: 241 IRNNETSKVVELLHRMDE 258
            ++  +++ +E+L    E
Sbjct: 476 CKSGRSARALEILREGRE 493



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M  R + P+++ Y  LIDG    G+++ A +LF  M  +G   + VTYN 
Sbjct: 166 IDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNV 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C    ++E+L L+  M SKG RP+  T+N L     +  +++ A +L   M    
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY+T I GLC    + +A  L   +   +C+  +   + LI GLCK G+++ A 
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+  ++   G  P+VVTYN ++HG C  GQ ++A +L  DM A+G+APN VT+  L+ G 
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405

Query: 241 IRNNETSKVVELLHRM 256
            + N   +   +  +M
Sbjct: 406 CKANRLPEACGVFAQM 421



 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L+  MI+ G  P+   Y+T++DG C +G ++ A  LF  M+  GC  N  ++NT
Sbjct: 96  LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNT 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G C+   ++++  ++ EM ++ I P   +Y  L  GL +  ++  A KLF  M  S 
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSG 215

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I G+C    + EA ELF+++R   C      ++ LID  CK GK++ A+
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAF 275

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G +P+VVTY+ +I G C+  ++D A  L  DM  +   P  VT NTL+ G 
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 241 IRNNETSKVVELLHRM 256
            +     +  E+L  M
Sbjct: 336 CKAGRIKEAREVLDAM 351



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 117/240 (48%), Gaps = 9/240 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +LD M+  G  P+   Y+TL+ G C  G+ +RAREL   M   G   NVVTY  
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   + E+  ++++M S G  P + TY  L  G     QV+  LKLF EM  + 
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-VLKCE-LGIEAYSCLIDGLCKIGKLET 178
           ++ +   Y T    LCK+G    A E+ R  R  L+ E  G E Y   +DGL   GK+E 
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEM 520

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH-------DLFLDMEAKGVAPNCV 231
           A    + + R G +P       ++ G C  GQ  +A        DL    +A+G A   V
Sbjct: 521 ALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFV 580



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 94/180 (52%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M  + + P   +Y  L  GL +  ++  A  LF ++ HS V   T  Y + I GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
             +A ELF  +    C      Y+ +ID  CK G LE A +L + +   G +P+VVTYN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++ G C  G++++A  LF +ME  G  PN  + NT++LG  + ++  +  ++ H M+ R+
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  182 bits (463), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 146/268 (54%), Gaps = 11/268 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M+ RG+ PN   Y+++IDGF     +D A  +F  M   GC  +V+T++ LI
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILI 395

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC  K V++ + L  EM  +G+    +TY TL HG  ++  +  AL L  EM  S V 
Sbjct: 396 DGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVC 455

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-----------GIEAYSCLIDGLC 171
               T NT +DGLC NG + +A E+F+ ++  K +L            ++ Y+ LI GL 
Sbjct: 456 PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLI 515

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             GK   A EL++ +P  GL+P+ +TYN +I G C   ++D+A  +F  M +KG +P+ V
Sbjct: 516 NEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVV 575

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
           TF TL+ G  +       +E+   M  R
Sbjct: 576 TFTTLINGYCKVGRVGDGLEVFCEMGRR 603



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 46/299 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+  LM  +G  P+   +S LIDG+C    +D   +L   M   G + N +TY T
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL------------FEIHQ--- 105
           LI+G+C+  ++  +L+L  EM+S G+ P VVT NTL  GL            F++ Q   
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488

Query: 106 -------------------------------VEHALKLFDEMQHSDVAAETSTYNTFIDG 134
                                             A +L++EM H  +  +T TYN+ IDG
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK   + EA ++F ++        +  ++ LI+G CK+G++    E+F  + R G++ N
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVAN 608

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            +TY  +IHGFC  G ++ A D+F +M + GV P+ +T   ++ G     E  + V+ L
Sbjct: 609 AITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 131/258 (50%), Gaps = 9/258 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+E SR         ++PN  +YS +IDG    G    A+ LF  M   G   N+ TYN 
Sbjct: 238 MEEVSR---------IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNC 288

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+C +    E+  L  EM  + + P VVT++ L + L +  +   A +L++EM    
Sbjct: 289 MINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG 348

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TYN+ IDG  K   +  A  +F  +    C   +  +S LIDG C   +++   
Sbjct: 349 IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGM 408

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   + R GL+ N +TY  +IHGFC  G ++ A DL  +M + GV PN VT NTL+ G 
Sbjct: 409 KLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468

Query: 241 IRNNETSKVVELLHRMDE 258
             N +    +E+   M +
Sbjct: 469 CNNGKLKDALEMFKVMQK 486



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 132/246 (53%), Gaps = 5/246 (2%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +PN   ++TL++G C  G +  A  L   M  +G   N +TY T+++G CK  D   +LN
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 77  LYSEM--LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L  +M  +S+ I+P VV Y+ +  GL++  +   A  LF EMQ   ++    TYN  I+G
Sbjct: 234 LLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF-QSLPRVGLMP 193
            C +G   EA  L R +   K    +  +S LI+ L K GK   A EL+ + LPR G++P
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR-GIIP 351

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           N +TYN MI GF    ++D A  +F  M  KG +P+ +TF+ L+ G          ++LL
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLL 411

Query: 254 HRMDER 259
           H M  R
Sbjct: 412 HEMSRR 417



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++    P    +  L+         D    L   M++     N+ ++  
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C    +  +L+ + ++   G  P++VT++TL HGL    +V  AL  F ++   +
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPN 176

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A    + T ++GLC+ G +VEA  L   +     +     Y  ++DG+CK+G   +A 
Sbjct: 177 VIA----FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 181 ELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +  V  + PNVV Y+ +I G   DG+   A +LF +M+ KG++PN  T+N ++ G
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 240 CIRNNETSKVVELLHRMDERN 260
              +   S+   LL  M ER 
Sbjct: 293 FCSSGRWSEAQRLLREMFERK 313


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  182 bits (463), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 147/258 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL+D M+  G++P+   Y+TLIDG C    +D A +L   M   G   N+V+YNTL+
Sbjct: 628 EARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLL 687

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++ +  L+ EML KG+ P V TYNT+ +GLF   +   A +L+  M  S   
Sbjct: 688 HGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKL 747

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  +DG CKN    EA ++F++L  +  +L I  ++ +IDGL K G+ E A +L
Sbjct: 748 WSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDL 807

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++P  GL+P+VVTY ++      +G +++   LF  ME  G APN    N L+   + 
Sbjct: 808 FAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLD 867

Query: 243 NNETSKVVELLHRMDERN 260
             E  +    L ++DE+N
Sbjct: 868 RGEIPRAGAYLSKLDEKN 885



 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 147/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E   LL+LM+  G+ PN  +++T+I  +     ID    +F+ M   G   NVVTY T
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V++++  +++M+++G+ P  V +N+L +GL  + + E   +LF EM +  
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG 605

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +NT +  LCK G ++EA  L  ++  +  +  + +Y+ LIDG C   +++ A 
Sbjct: 606 IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL PN+V+YN ++HG+C  G++D A+ LF +M  KGV P   T+NT++ G 
Sbjct: 666 KLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGL 725

Query: 241 IRNNETSKVVELLHRM 256
            R+   S+  EL   M
Sbjct: 726 FRSGRFSEARELYVNM 741



 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 141/254 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +  +   L ++ GV P+   Y+T+IDG C   E+DRA ++F  M   G   N VTYNT+I
Sbjct: 208 QVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTII 267

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK ++V+ +  ++ +M+ KG++P+ VTYNT+  GL +   V+ A  +F +M    V 
Sbjct: 268 DGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVK 327

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT IDGLCK   I +A  +F+ +     +     Y+ +IDGLCK   ++ A  +
Sbjct: 328 PDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGV 387

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +   G+ PN  TYN +IHG+ + GQ ++      +M A  + P+  T+  L+    +
Sbjct: 388 FQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCK 447

Query: 243 NNETSKVVELLHRM 256
           N + ++   L   M
Sbjct: 448 NGKCNEARSLFDSM 461



 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M+ +GV+P+   Y+T+IDG C    +DRA  +F  M   G   + VTYNT
Sbjct: 276 VDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNT 335

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK + ++++  ++ +M+ KG++P  +TY  +  GL +   V+ A  +F +M    
Sbjct: 336 IIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKG 395

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  I G    G   E  +  + +     E  +  Y  L+D LCK GK   A 
Sbjct: 396 VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEAR 455

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF S+ R G+ P+V  Y IM+HG+   G + + HDL   M A G++PN   FNT++   
Sbjct: 456 SLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAY 515

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +V+ +  +M ++
Sbjct: 516 AKRAMIDEVMHIFIKMKQQ 534



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 132/223 (59%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +G+RP+   ++T++   C  G +  AR L  SM   G   +V++YNTLI+G+C    
Sbjct: 601 MLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR 660

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E++ L   M+S G++P +V+YNTL HG  +  ++++A  LF EM    V     TYNT
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++GL ++G   EA EL+  +   +    I  YS ++DG CK    + A+++FQSL  + 
Sbjct: 721 ILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMD 780

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           L  +++T+NIMI G    G+ + A DLF  + A G+ P+ VT+
Sbjct: 781 LQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTY 823



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 41/288 (14%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLT--------------------------------- 33
           LL  M + G R     Y+TL+ G C                                   
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 34  -----GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
                G++D+A  LF+ M   G   +VVTYNT+I+G CK ++V+ + +++ +M+ KG++P
Sbjct: 202 GFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
             VTYNT+  GL +  +V+ A  +F +M    V     TYNT IDGLCK   +  A  +F
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           + +     +     Y+ +IDGLCK   ++ A  +FQ +   G+ P+ +TY I+I G C  
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +D+A  +F  M  KGV PN  T+N L+ G +   +  +VV+ +  M
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 123/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   MI RGV+P+   Y+T+IDG C    ID+A  +F  M   G   + +TY  
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK + V+ +  ++ +M+ KG++P   TYN L HG     Q E  ++   EM   D
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   +D LCKNG   EA  LF ++     +  +  Y  ++ G  K G L    
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +L   +   G+ PN   +N +I  +     +D+   +F+ M+ +G++PN VT+ TL+
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 136/260 (52%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   +   M Q+G+ PN   Y TLID  C  G +D A   F  M   G   N V +N+
Sbjct: 521 IDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNS 580

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C     E+   L+ EML++GIRP +V +NT+   L +  +V  A +L D M    
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +YNT IDG C    + EA +L   +     +  I +Y+ L+ G CK G+++ A+
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + R G+ P V TYN +++G    G+  +A +L+++M       +  T++ ++ G 
Sbjct: 701 CLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGF 760

Query: 241 IRNN---ETSKVVELLHRMD 257
            +NN   E  K+ + L  MD
Sbjct: 761 CKNNCFDEAFKIFQSLCSMD 780



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 15/258 (5%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFV-SMDINGCMHNVVTYNTLINGYCKT 68
           L+++ G R +  V + L+ G C T  +  A  + +  M   GC   VV+YNTL+ G C  
Sbjct: 109 LILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDR 168

Query: 69  KDVEESLNLYSEMLS---KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           +  EE+  L   M+        P VV+YN + +G F   QV+ A  LF EM    V+ + 
Sbjct: 169 RRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDV 225

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWE 181
            TYNT IDGLCK   +  A ++F+ +     E G++     Y+ +IDGLCK  +++ A  
Sbjct: 226 VTYNTIIDGLCKAQEVDRAEDVFQQM----VEKGVKPNNVTYNTIIDGLCKAQEVDMAEG 281

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +FQ +   G+ P+ VTYN +I G C    +D+A  +F  M  +GV P+ VT+NT++ G  
Sbjct: 282 VFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341

Query: 242 RNNETSKVVELLHRMDER 259
           +     K   +  +M ++
Sbjct: 342 KAQAIDKAEGVFQQMIDK 359



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 135/253 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  GV PN  V+++L+ G C   + ++  ELF+ M   G   ++V +NT
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT 615

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK   V E+  L   M+  G++P V++YNTL  G     +++ A+KL D M  + 
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +YNT + G CK G I  A  LFR +       G+E Y+ +++GL + G+   A 
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAR 735

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+ ++ +   + ++ TY+I++ GFC +   D+A  +F  + +  +  + +TFN ++ G 
Sbjct: 736 ELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGL 795

Query: 241 IRNNETSKVVELL 253
            +       ++L 
Sbjct: 796 FKGGRKEDAMDLF 808



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   MI +GV+P+   Y+ +IDG C    +DRA  +F  M   G   N  TYN 
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405

Query: 61  LINGY-----------------------------------CKTKDVEESLNLYSEMLSKG 85
           LI+GY                                   CK     E+ +L+  M+ KG
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I+P+V  Y  + HG  +   +     L + M  + ++     +NT I    K   I E  
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVM 525

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +F  ++       +  Y  LID LCK+G+++ A   F  +   G+ PN V +N +++G 
Sbjct: 526 HIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C   + +K  +LFL+M  +G+ P+ V FNT++    +     +   L+  M
Sbjct: 586 CTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 126/248 (50%), Gaps = 7/248 (2%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+   YS +I  FC  G ++     F  +   G   + +  N L+ G C TK V E++
Sbjct: 80  VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139

Query: 76  N-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHSDVAAETSTYNTF 131
           + L  +M   G R  VV+YNTL  GL +  + E A +L   M   Q S  + +  +YN  
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+G    G + +A  LF  + V      +  Y+ +IDGLCK  +++ A ++FQ +   G+
Sbjct: 200 INGFFNEGQVDKAYSLFLEMGV---SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PN VTYN +I G C   ++D A  +F  M  KGV P+ VT+NT++ G  +     +   
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316

Query: 252 LLHRMDER 259
           +  +M +R
Sbjct: 317 VFQQMIDR 324



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 63/151 (41%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA ++   +    ++ +   ++ +IDG    G  + A +LF ++  NG + +VVTY  +
Sbjct: 767 DEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLI 826

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
                +   +EE   L+S M   G  P     N L   L +  ++  A     ++   + 
Sbjct: 827 AENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNF 886

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           + E ST +  I    +  Y   A  L    R
Sbjct: 887 SLEASTTSMLISLFSREEYQQHAKSLPEKCR 917


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 147/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++L  M ++G+ P+   Y+ LIDG+C  G ID A E+   M+ N C  N  TYN 
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK + V +++ L ++ML + + P+++TYN+L HG  +++ +E A +L   M  + 
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+ FID LCK G + EA  LF +++    +     Y+ LIDG CK+GK++ A+
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +     +PN  TYN++I G C + +M +A  L   M   GV P  VT+  L+   
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589

Query: 241 IRNNETSKVVELLHRM 256
           +++      +++ + M
Sbjct: 590 LKDGAFDHALKVFNHM 605



 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 142/261 (54%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           +DE   +   ++   + PN + ++ +++G+C  G +  A EL+ S  +   +H +  TY 
Sbjct: 175 IDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA-ELYASKIVQAGLHPDTFTYT 233

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI G+C+ K V+ +  ++  M  KG +   V+Y  L HGL E  ++  ALKLF +M   
Sbjct: 234 SLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED 293

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +      TY   I  L  +G  VEA  LF  ++   CE  +  Y+ LIDGLCK  K++ A
Sbjct: 294 NCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEA 353

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++   +   GL+P+VVTYN +I G+C +G +D A ++   ME+    PN  T+N L+ G
Sbjct: 354 RKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICG 413

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +  +  K + LL++M ER 
Sbjct: 414 LCKKRKVHKAMALLNKMLERK 434



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 130/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA      ++Q G+ P+ F Y++LI G C    +D A E+F+ M   GC  N V+Y  LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+L L+++M      PTV TY  L + L    +   AL LF+EM+     
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDGLCK   + EA ++   +        +  Y+ LIDG CK G ++ A+E+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +      PN  TYN +I G C   ++ KA  L   M  + ++P+ +T+N+L+ G  +
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451

Query: 243 NNETSKVVELLHRMDE 258
            N+      LL  M+E
Sbjct: 452 VNDLESAYRLLSLMNE 467



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L   M +    P    Y+ LI     +G    A  LF  M   GC  NV TY  
Sbjct: 280 INEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTV 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   ++E+  + SEM  KG+ P+VVTYN L  G  +   ++ A ++ D M+ + 
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYN  I GLCK   + +A  L   +   K    +  Y+ LI G CK+  LE+A+
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL+P+  TY++ I   C +G++++A  LF  ++AKGV  N V +  L+ G 
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL RM
Sbjct: 520 CKVGKIDVAYSLLERM 535



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL+ M++R + P+   Y++LI G C   +++ A  L   M+ NG + +  TY+  I
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   VEE+  L+  + +KG++   V Y  L  G  ++ +++ A  L + M +    
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + TYN  I+GLCK   + EA+ L   +  +  +  +  Y+ LI  + K G  + A ++
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +  +G  P+V TY   +H + + G +++  D+   M  +G+ P+ VT+  L+ G  R
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 243 NNETSKVVELLHRM 256
              T +  + L  M
Sbjct: 662 LGLTHRAFDFLKCM 675



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 111/237 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A RLL LM + G+ P+ + YS  ID  C  G ++ A  LF S+   G   N V Y  
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK   ++ + +L   ML+    P   TYN L  GL +  +++ A  L  +M    
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   I  + K+G    A ++F  +  L  +  +  Y+  +      G LE   
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++   +   G++P++VTY ++I G+   G   +A D    M   G  P+    + L+
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 18/276 (6%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A ++ + M+  G +P+   Y+  +  +   G ++   ++   M+  G + ++VTY  L
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV--------------- 106
           I+GY +      + +    M+  G +P++   + L   L   +++               
Sbjct: 656 IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNT 715

Query: 107 ---EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
              E ALKLF++M       + S Y   I G C+   + EA  L   ++        + Y
Sbjct: 716 LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 775

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + L+D  CK+G    A  L  ++   GL+P + +Y +++ G   +G  +KA  +F  + +
Sbjct: 776 NSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLS 835

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            G   + V +  L+ G ++ +   +  EL+  M+E+
Sbjct: 836 CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 871



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 18/260 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   ++  M + G+ P+   Y+ LIDG+   G   RA +    M   GC  ++   + 
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689

Query: 61  L------------------INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           L                  I+    T + E +L L+ +M+  G    V  Y  L  G  +
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 749

Query: 103 IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
             ++E A  L   M+   ++     YN+ +D  CK G   EA  L   +        +E+
Sbjct: 750 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 809

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y  L+ GL   G  E A  +F  L   G   + V + ++I G      +D+  +L   ME
Sbjct: 810 YKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIME 869

Query: 223 AKGVAPNCVTFNTLMLGCIR 242
            KG  PN +T++ L+ G  R
Sbjct: 870 EKGCQPNPLTYSLLIEGLER 889


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 143/259 (55%), Gaps = 2/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +++ M ++GV P+   Y+ ++D  C  G++D A ELF  M   GC  N V YN LI
Sbjct: 28  EALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALI 87

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK +++E +  L  EM SKG  P  +TYNT+  GL  + +V  A + FD M     +
Sbjct: 88  NGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYS 147

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAW 180
            +   YN  +D L K G + EA  LF+T+ +   ++  +   Y+ LIDG C++ K + A 
Sbjct: 148 PDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAM 207

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G MP+ VTYN ++ G      MD+A ++F  M   G APN  T++ ++ G 
Sbjct: 208 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGH 267

Query: 241 IRNNETSKVVELLHRMDER 259
            R    ++ +EL   M E+
Sbjct: 268 CRVGNMARCLELYEEMTEK 286



 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 137/248 (55%), Gaps = 2/248 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++G  P+   YST+I G C TG++  A E+   M   G   +V TY  +++  C+   
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E+  L+ +M+ +G     V YN L +GL +   +E A KL +EM       +  TYNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV- 189
            + GLC+ G + EA + F ++        + AY+ L+D L K GK+  AW LF+++    
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 190 -GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             + P+++TYN +I GFC   + D+A  LF D+ AKG  P+ VT+N+++LG  R +   +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 249 VVELLHRM 256
             E+  +M
Sbjct: 241 AEEMFKKM 248



 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 139/258 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA +L   +I +G  P+   Y++++ G      +D A E+F  M  +GC  N  TY+ +
Sbjct: 204 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIV 263

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G+C+  ++   L LY EM  K   P V+  N +   L +  +V+ A K+ +EM     
Sbjct: 264 LSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGA 323

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  +DGLCK   + +A ELF T+    C   I +YS +++GLCK  K+  A  
Sbjct: 324 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 383

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +    L+P+VVT+NI++ G C  G++D+A DL   M    V P+ VT  TLM G  
Sbjct: 384 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLC 443

Query: 242 RNNETSKVVELLHRMDER 259
           R+  T + V L   M E+
Sbjct: 444 RDKRTDEAVRLFQYMVEK 461



 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 142/261 (54%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++L+ M + G  P+   Y+ L+DG C T  +D+A ELF +M  NGC  ++V+Y+ 
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CKT  V ++  L+  M+ + + P VVT+N L  GL +  +++ A  L D M   +
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T  T + GLC++    EA  LF+ +        +  ++ ++ GLC+ GKL  A 
Sbjct: 428 VLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL 487

Query: 181 ELFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             F+S+ +      P+VVTY  +++     G++D+A D F  M   G AP+ V +NTLM 
Sbjct: 488 LFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMN 547

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  +     +   L   M E+
Sbjct: 548 GLRKQGRHIQADRLTQAMKEK 568



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 37/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +LL+ M  +G  P+   Y+T++ G C  G++  A++ F SM   G   +VV YN 
Sbjct: 96  IERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 155

Query: 61  LINGYCKTKDVEESLNLYS--EMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           L++   K   V E+  L+   +M  + + P ++TYNTL  G   + + + A+KLF ++  
Sbjct: 156 LLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIA 215

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS-------------- 164
                +T TYN+ + GL +   + EA E+F+ +    C      YS              
Sbjct: 216 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMAR 275

Query: 165 CL---------------------IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           CL                     ID LCK  K++ A ++ + + ++G +P+VVTYNI++ 
Sbjct: 276 CLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 335

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G C    +DKAH+LF  M   G AP+ V+++ ++ G  + N+      L  RM ER 
Sbjct: 336 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 392



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  +   M+  G  PN   YS ++ G C  G + R  EL+  M       +V+  N 
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK K V+++  +  EM   G  P VVTYN L  GL + + V+ A +LF  M  + 
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +  +Y+  ++GLCK   + +A  LF  +   K    +  ++ L+DGLCK GKL+ A 
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +    ++P+ VT   ++HG C D + D+A  LF  M  KG   + +  N ++ G 
Sbjct: 418 DLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGL 477

Query: 241 IRNNETSKVVELLHRM 256
            R  + ++ +     M
Sbjct: 478 CREGKLAQALLFFKSM 493



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 2/232 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+  G  P+   YS +++G C T ++  AR LF  M     + +VVT+N 
Sbjct: 343 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 402

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   ++E+ +L   M    + P  VT  TL HGL    + + A++LF  M    
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG--IEAYSCLIDGLCKIGKLET 178
             A+   +N  + GLC+ G + +A   F+++     E    +  Y+ L++ L + G+++ 
Sbjct: 463 TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           A + FQ +   G  P+ V YN +++G    G+  +A  L   M+ KG   +C
Sbjct: 523 AVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 574



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 96/177 (54%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M  KG  P VVTY+T+  GL +  +V  AL++ +EM    V  + +TY   +D LC+ G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           + EA ELF  +    C     AY+ LI+GLCK   +E A++L + +   G  P+ +TYN 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           ++ G C  G++ +A   F  M ++G +P+ V +N L+    +  + ++   L   MD
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 75/144 (52%)

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M       +  TY+T I GLCK G + EA E+   +        +  Y+ ++D LC+ GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A ELF  +   G   N V YN +I+G C D  +++A+ L  +M +KG  P+ +T+NT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           ++ G  R  + S+  +    M  R
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSR 144


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 145/257 (56%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA +LL  M++ G R N   YST++DG    G ++ A  +   M   GC+ + VTYNT
Sbjct: 559 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 618

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K + + E++ L  EML  G  P+VVTY TL HGL    + + A+++ D M    
Sbjct: 619 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
            A    TY++ +DGLCK G + EA   F  + R       + AYS LIDGLCK G+++ A
Sbjct: 679 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEA 738

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +E  + + R G +P+VVT++I+I+G C+ G++D   +LF  M  +G   +   +N ++  
Sbjct: 739 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINA 798

Query: 240 CIRNNETSKVVELLHRM 256
                E S    LL  M
Sbjct: 799 YCLKGEFSAAYALLEEM 815



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 138/249 (55%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           +D ++ +  RP    Y+TL+ G   +G +  A  L   M  +G   +V+T+N++++G CK
Sbjct: 461 VDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK 520

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            + + ++ N++   L +G RP VVTY+TL  GL ++ +++ AL+L  +M      A T T
Sbjct: 521 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 580

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y+T +DGL K G + +A  + R +R   C      Y+ LIDG  K  +L  A  L + + 
Sbjct: 581 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 640

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G  P+VVTY  + HG C  G+ D+A ++   M A+G APN +T+++++ G  +    +
Sbjct: 641 EAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT 700

Query: 248 KVVELLHRM 256
           + +    +M
Sbjct: 701 EALGYFEKM 709



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 29/287 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +LL+ M  RG  PNA  Y+TL++     G    A  L   M  NGC   ++T+  
Sbjct: 52  VDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGL 111

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G CK  ++E +  +  EM+ +G  P V  +  L H L E+ +V+ A   F ++    
Sbjct: 112 IIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIG 171

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYNT +DGL K G +  A  + + L        +  ++  +DGL K G L  A+
Sbjct: 172 FTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAY 231

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD-------------------- 220
           E F S+P+ G+ PN VTY+ +I G C  G++D A  L  D                    
Sbjct: 232 EFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQA 291

Query: 221 ---------MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
                    ++A    PN V FN+LM G  +     +  EL   M E
Sbjct: 292 HRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKE 338



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 135/255 (52%), Gaps = 1/255 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL+ MI+ G+ P+   +++++DG C    I  A  +F      GC  NVVTY+TLI
Sbjct: 491 DALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 550

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+L L ++M+  G R   VTY+T+  GL ++ ++E A+ +  +M+ +   
Sbjct: 551 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 610

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT IDG  K   + EA  L R +        +  Y+ L  GLC+ G+ + A E+
Sbjct: 611 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 670

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLMLGCI 241
              +   G  PN +TY+ ++ G C  G++ +A   F  M   + VAP+ + ++ L+ G  
Sbjct: 671 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 730

Query: 242 RNNETSKVVELLHRM 256
           +     +  E L RM
Sbjct: 731 KAGRIDEAYEFLERM 745



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 21/267 (7%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---------------------DINGCMH 53
           G+ PN F Y+ L++G C  G+  R  + F  M                      +  C  
Sbjct: 412 GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRP 471

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
            +VTYNTL+ G  K+  V ++L L   M+  G+ P V+T+N++  GL +  ++  A  +F
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
                        TY+T IDGL K   + EA +L   +  L C      YS ++DGL K+
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G++E A  + + +   G +P+ VTYN +I GF    ++ +A  L  +M   G  P+ VT+
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
            TL  G  R+    + VE+L  M  R 
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARG 678



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 137/316 (43%), Gaps = 58/316 (18%)

Query: 1   MDEASRLLDLMIQ------------------------------------RGVRPNAFVYS 24
           +DEA  L D+M +                                     G  PN   +S
Sbjct: 326 VDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFS 385

Query: 25  TLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           TLI G C  G +++A E++  M  + G   N  TY  L+ G CK  D       + +ML 
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445

Query: 84  KGIR---------------------PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  R                     PT+VTYNTL  GL +   V  AL L + M  S ++
Sbjct: 446 REWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N+ +DGLCK   I++A  +F+      C   +  YS LIDGL K+ K++ A +L
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +  +G   N VTY+ ++ G    G+M+ A  +   M   G  P+ VT+NTL+ G  +
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625

Query: 243 NNETSKVVELLHRMDE 258
                + V LL  M E
Sbjct: 626 RQRLREAVGLLREMLE 641



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 128/293 (43%), Gaps = 36/293 (12%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +DEA   L+ MI+ G  P+   +S LI+G C  G ID   ELF  M   GC  ++  YN 
Sbjct: 735  IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNA 794

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVT---------------------------- 92
            +IN YC   +   +  L  EM + GI    VT                            
Sbjct: 795  MINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC 854

Query: 93   -----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                 YNTL   L    + E AL+L   M     + +   Y T +DGL K G    AA+L
Sbjct: 855  RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL 914

Query: 148  FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
             + +R       +  Y+ +I GL K  +L  A + F+ + R  L P+ + Y+ +I  FC 
Sbjct: 915  LQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFC- 973

Query: 208  DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              + DK  D +  + + G+ P    ++T++    +N  T K +E++  M  +N
Sbjct: 974  --KADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKN 1024



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           +VTYN LING CK   V ++   + + +  G RPTVVTY+T+  GL   ++V+   KL +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM     A    TYNT ++ L   G   EA  L   +    C   +  +  +I GLCK G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           ++E A+ +   +   G +P+V  + +++H  C  G++D+A   F  +   G  P+ VT+N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 235 TLMLG 239
           T++ G
Sbjct: 181 TMVDG 185



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 35/267 (13%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ LI+G C  G +  A   F      G    VVTY+T+I+G C+  +V++   L  EM 
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            +G  P  VTYNTL + L    + + A  L + M  +    E  T+   I GLCK G I 
Sbjct: 64  GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
            A  +   +        +E ++ L+  LC++G+++ AW  FQ +  +G  P+ VTYN M+
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183

Query: 203 HGFCNDGQMDK-----------------------------------AHDLFLDMEAKGVA 227
            G    G+++                                    A++ F  M   GV+
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLH 254
           PN VT++ L+ G  +  +    + LL 
Sbjct: 244 PNTVTYDALIDGLCKAGKLDIALGLLR 270



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 142/345 (41%), Gaps = 93/345 (26%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID-------------------------- 37
           A    D M Q GV PN   Y  LIDG C  G++D                          
Sbjct: 230 AYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLC 289

Query: 38  ---RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
              R  E    +    C+ NVV +N+L+NG C+ + V+E+  L+  M   G    V+TYN
Sbjct: 290 QAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYN 349

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            L  GL ++ ++  A +  + M+ ++  +    T++T I GLC  G + +A E++  +  
Sbjct: 350 ILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVA 409

Query: 154 LKCELGIEA----YSCLIDGLCKIGK-----------LETAWELFQSLP----------- 187
           ++   GI      Y+ L++GLCK G            LE  W    S P           
Sbjct: 410 VE---GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMV 466

Query: 188 ----------------------------------RVGLMPNVVTYNIMIHGFCNDGQMDK 213
                                               GL P+V+T+N ++ G C + ++  
Sbjct: 467 QVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILD 526

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           AH++F     +G  PN VT++TL+ G  +  +  + ++LL +M E
Sbjct: 527 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 571



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 116/272 (42%), Gaps = 33/272 (12%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+   YS LIDG C  G ID A E    M   G + +VVT++ LING C    ++  L
Sbjct: 715 VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 774

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L+  M  +G +  +  YN + +      +   A  L +EM+   +A  T T+   I  L
Sbjct: 775 ELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKAL 834

Query: 136 CKNGYIVEAAELFRT------------------------------LRVLKCELGIEA--- 162
           C N  I EA   F +                              LR +  + G      
Sbjct: 835 CGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACN 894

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y  ++DGL K G  E A +L Q +   G  P++ TY IMI G     Q+  A D F +M 
Sbjct: 895 YMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEML 954

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            K + P+ + +++L+    + ++     +LL 
Sbjct: 955 RKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR 986



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 3/185 (1%)

Query: 2    DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            ++A  LL  M+  G  P+A  Y T++DG    G  + A +L   M   G   ++ TY  +
Sbjct: 874  EQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIM 933

Query: 62   INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            I+G  K K +  + + + EML K ++P  + Y++L     +  +V+ A KL   ++ S +
Sbjct: 934  ISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGI 990

Query: 122  AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                + Y+T +D LCKN    +A E+ R ++   CE GI  ++ L       G+++ A +
Sbjct: 991  EPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVK 1050

Query: 182  LFQSL 186
            L   L
Sbjct: 1051 LVNDL 1055



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 3/200 (1%)

Query: 23   YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
            Y+TLI     +   ++A EL  +M  +G   +   Y T+++G  K    E +  L  EM 
Sbjct: 860  YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMR 919

Query: 83   SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            S+G  P + TY  +  GL +  Q+  A   F+EM   ++  +   Y++ ID  CK   + 
Sbjct: 920  SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD 979

Query: 143  EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
            +A +L R+  +   E  I  YS ++D LCK    + A E+ + +      P +  +  + 
Sbjct: 980  DAWKLLRSSGI---EPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLA 1036

Query: 203  HGFCNDGQMDKAHDLFLDME 222
              +  +G++D+A  L  D++
Sbjct: 1037 TAYVAEGRVDEAVKLVNDLQ 1056



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 64/134 (47%)

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I+GLCK G + +A   FR          +  YS +IDGLC+  +++   +L + +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  PN VTYN +++     G+  +A  L   M A G  P  +TF  ++ G  +  E 
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 247 SKVVELLHRMDERN 260
                ++  M +R 
Sbjct: 123 EAAFRVVDEMVDRG 136



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 11   MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
            M+++ ++P+A VYS+LID FC   ++D A +L  S   +G    +  Y+T+++  CK + 
Sbjct: 953  MLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRG 1009

Query: 71   VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
             +++L +  EM SK   P +  + +L        +V+ A+KL +++Q
Sbjct: 1010 TDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%)

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +VTYN++I+G C  G++  A   F      G  P  VT++T++ G  R+NE  K  +LL 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 255 RMDERN 260
            M  R 
Sbjct: 61  EMAGRG 66


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 150/257 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L +M+++ V+ +   Y++L+DG+CL  ++++A+ LF  M   G   +V +Y+ +I
Sbjct: 286 EAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMI 345

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K V+E++ L+ EM  K I P VVTYN+L  GL +  +   AL+L DEM      
Sbjct: 346 NGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQP 405

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           +   TYN+ +D +CKN ++ +A  L   ++    +  I  Y+ LI+GLCK+G+L+ A ++
Sbjct: 406 SNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKV 465

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L   G  PN+ TY  +I+GFCN G  D+   +   M+  G  PN +T+  L+     
Sbjct: 466 FEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFE 525

Query: 243 NNETSKVVELLHRMDER 259
            +E  K  +LL  M  R
Sbjct: 526 KDENDKAEKLLREMIAR 542



 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 145/251 (57%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + +   Y TLI+G C  GE   A +L   +D      NVV Y+T+I+  CK 
Sbjct: 152 DKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKD 211

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V ++ +LY EM+SK I P VVTY++L  G   + ++++A+ LF+ M   ++     T+
Sbjct: 212 KLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTF 271

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           +  IDG CK G + EA  +   +     +L +  Y+ L+DG C + ++  A  LF  + +
Sbjct: 272 SILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQ 331

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P+V +Y+IMI+GFC    +D+A  LF +M  K + PN VT+N+L+ G  ++  TS 
Sbjct: 332 RGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSC 391

Query: 249 VVELLHRMDER 259
            +EL+  M +R
Sbjct: 392 ALELVDEMHDR 402



 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 131/244 (53%), Gaps = 3/244 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ + + P+   YS+LI GFC+ G++  A +LF  M  +    NV T++ LI+G+CK   
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+ N+ + M+ K ++  VVTYN+L  G   + QV  A  LF+ M    V  +  +Y+ 
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+G CK   + EA +LF  +   +    +  Y+ L+DGLCK G+   A EL   +   G
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI---RNNETS 247
              N++TYN ++   C +  +DKA  L   ++ KG+ P+  T+  L+ G     R ++  
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463

Query: 248 KVVE 251
           KV E
Sbjct: 464 KVFE 467



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 139/256 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  +  + VRPN  +YST+ID  C    ++ A +L+  M       +VVTY++LI+
Sbjct: 182 AVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLIS 241

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    ++ +++L++ M+S  I P V T++ L  G  +  +V  A  +   M   +V  
Sbjct: 242 GFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKL 301

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ +DG C    + +A  LF  +        + +YS +I+G CKI  ++ A +LF
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLF 361

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    + PNVVTYN ++ G C  G+   A +L  +M  +G   N +T+N+++    +N
Sbjct: 362 EEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKN 421

Query: 244 NETSKVVELLHRMDER 259
           N   K + LL ++ E+
Sbjct: 422 NHVDKAIVLLTKIKEK 437



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 122/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L ++M QRGV P+ + YS +I+GFC    +D A +LF  M       NVVTYN+
Sbjct: 319 VNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNS 378

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK+     +L L  EM  +G    ++TYN++   + + + V+ A+ L  +++   
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I+GLCK G + +A ++F  L V      I  Y+ LI+G C  G  +   
Sbjct: 439 IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGL 498

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            +   +   G +PN +TY I+IH      + DKA  L  +M A+G+
Sbjct: 499 AMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 130/245 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++P+    + L++ F   G I  +  +F  +   G   + VT+  LI G C   +V ++
Sbjct: 88  GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L  + +++++G +   V+Y TL +GL  + + + A++L   +    V      Y+T ID 
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDS 207

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           +CK+  + +A +L+  +   +    +  YS LI G C +GKL+ A +LF  +    + PN
Sbjct: 208 MCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPN 267

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T++I+I GFC +G++ +A ++   M  K V  + VT+N+LM G     + +K   L +
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFN 327

Query: 255 RMDER 259
            M +R
Sbjct: 328 VMAQR 332



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 119/243 (48%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P A  +  ++       +   A  L   M+ NG   + +T N L+N + +   ++ S ++
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           ++++L KG  P  VT+  L  GL    +V  AL   D++       +  +Y T I+GLC+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G    A +L R +        +  YS +ID +CK   +  A++L+  +    + P+VVT
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y+ +I GFC  G++  A DLF  M +  + PN  TF+ L+ G  +  +  +   +L  M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 258 ERN 260
           ++N
Sbjct: 296 KKN 298


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/258 (37%), Positives = 143/258 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA   L  M + G  PN   YSTLIDG+CL G++D AR +F  M   GC  NV TY +L
Sbjct: 184 NEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSL 243

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NGYCK + +EE++ L  E L KG+ P +VT+ T+  GL    +   A +LF  +     
Sbjct: 244 MNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH 303

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY   +DGLCK+G + EA  LF+ ++    +  +  Y+ LID LCK GK++   E
Sbjct: 304 TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKE 363

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  L   GL PNV TY  ++   C +G + +AH LF  ME  G  P+   +N ++ G +
Sbjct: 364 LFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFL 423

Query: 242 RNNETSKVVELLHRMDER 259
           ++ + S   +L+  M  R
Sbjct: 424 QHKDPSMARQLVEEMVNR 441



 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 143/258 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+   L D M+ RG++PN + Y+ +I+    +G+ + A      M+  GC+ NVV Y+T
Sbjct: 148 MDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYST 207

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC    ++E+ +++  M+SKG  P V TY +L +G  +I ++E A++L DE     
Sbjct: 208 LIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKG 267

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+ T I GLC+ G  + A +LFR +        I  Y  L+DGLCK G LE A+
Sbjct: 268 LVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAF 327

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LFQ + R  + PN+V Y I+I   C  G++    +LF  +  +G+ PN  T+  L+   
Sbjct: 328 ALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGAL 387

Query: 241 IRNNETSKVVELLHRMDE 258
            +     +  +L  +M+E
Sbjct: 388 CKEGLIIEAHKLFRKMEE 405



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 116/232 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  + DLM+ +G  PN + Y++L++G+C    I+ A +L       G + ++VT+ T
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C+      +  L+  + + G  P ++TY  L  GL +   +E A  LF EMQ S 
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      Y   ID LCK G I +  ELF  L     +  +  Y+ L+  LCK G +  A 
Sbjct: 338 VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAH 397

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +LF+ +   G  P+   YN++I GF        A  L  +M  +G + +  T
Sbjct: 398 KLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 119/244 (48%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  +    S LI+ FC    +D    +   +   G   ++VT+ TL+NG C    +++ 
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + LY +ML +G++P V TYN + + L +  +   AL    +M+          Y+T IDG
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            C  G + EA  +F  +    C   +  Y+ L++G CKI ++E A +L     R GL+P+
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +VT+  +I G C  G+   A  LF  + A G  PN +T+  L+ G  ++    +   L  
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331

Query: 255 RMDE 258
            M  
Sbjct: 332 EMQR 335



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 121/241 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A     LM+ R   P    +S L       G  +    L   ++  G   ++ + + L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +C    V+  L++ S++L  G+ P++VT+ TL +GL    +++  + L+D+M    +
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  I+ L K+G   EA    + +  + C   +  YS LIDG C  G+++ A  
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  +   G  PNV TY  +++G+C   ++++A  L  +   KG+ P+ VTF T++ G  
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 242 R 242
           R
Sbjct: 284 R 284



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 70/131 (53%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           ++     + + G+      L + +  L  E  I + S LI+  C + +++    +   + 
Sbjct: 65  FSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL 124

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           ++GL P++VT+  +++G C +G+MD+   L+ DM  +G+ PN  T+N ++    ++ + +
Sbjct: 125 KLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKAN 184

Query: 248 KVVELLHRMDE 258
           + +  L +M++
Sbjct: 185 EALGFLKQMEK 195



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 56/114 (49%)

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A   FR + + K    I  +S L   + ++G  ET   L + +  +G+  ++ + +I+I
Sbjct: 45  DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + FC+  ++D    +   +   G+ P+ VTF TL+ G     +  +V+ L   M
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM 158


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 148/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+ +M + GVRP+   ++T+++G C  G ++ AR++F  M   G   + V+YNT
Sbjct: 206 VDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNT 265

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYCK   + E+L +++EM  KG+ P VVT+ +L H +     +E A+ L  +M+   
Sbjct: 266 LVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERG 325

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   IDG C+NG++ +A    + +R  + +  +  Y+ LI+G CK+G+++ A 
Sbjct: 326 LRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEAR 385

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G+ P+VVTY+ ++ G+C  G  D A +L   M  KGV P+ +T+++L+ G 
Sbjct: 386 ELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGL 445

Query: 241 IRNNETSKVVELLHRM 256
                     EL  +M
Sbjct: 446 CEERRLGDACELFEKM 461



 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 136/248 (54%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D M   G  PN   Y+TL+  FC  GE+D A  L   M   G   ++VT+NT++NG CK 
Sbjct: 179 DDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKA 238

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             +E++  ++ EM  +G+ P  V+YNTL  G  +   +  AL +F EM    V  +  T+
Sbjct: 239 GRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTF 298

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            + I  +C+ G +  A  L   +R     +    ++ LIDG C+ G L+ A    + +  
Sbjct: 299 TSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRE 358

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             + P+VV YN++I+G+C  G+MD+A +L  +MEAKG+ P+ VT++T++ G  +  +T  
Sbjct: 359 CRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDS 418

Query: 249 VVELLHRM 256
             EL  +M
Sbjct: 419 AFELNRKM 426



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 135/253 (53%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L+  M +RG+R N F ++ LIDGFC  G +D A      M       +VV YN 
Sbjct: 311 LERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNV 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK   ++E+  L  EM +KG++P VVTY+T+  G  +I   + A +L  +M    
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY++ I GLC+   + +A ELF  +  L  +     Y+ LIDG CK G ++ A 
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKAL 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G++P+VVTY+++I G     +  +A  L   +  +   P+ + +  LM  C
Sbjct: 491 SLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM-HC 549

Query: 241 IRNNETSKVVELL 253
            R  E   VV LL
Sbjct: 550 CRTAEFKSVVALL 562



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 142/258 (55%), Gaps = 4/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M Q+GV P+   +++LI   C  G ++RA  L   M   G   N  T+  
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+   ++++L    EM    I+P+VV YN L +G  ++ +++ A +L  EM+   
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLET 178
           +  +  TY+T + G CK G    A EL R  ++LK  +  +A  YS LI GLC+  +L  
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNR--KMLKKGVVPDAITYSSLIRGLCEERRLGD 453

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A ELF+ + ++GL P+  TY  +I G C +G + KA  L  +M  KGV P+ VT++ L+ 
Sbjct: 454 ACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLID 513

Query: 239 GCIRNNETSKVVELLHRM 256
           G  ++  T +   LL ++
Sbjct: 514 GLSKSARTKEAQRLLFKL 531



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 50/289 (17%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   +  M +  ++P+   Y+ LI+G+C  G +D AREL   M+  G   +VVTY+T
Sbjct: 346 LDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYST 405

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYCK  D + +  L  +ML KG+ P  +TY++L  GL E  ++  A +LF++M    
Sbjct: 406 ILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLG 465

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL---------- 170
           +  +  TY T IDG CK G + +A  L   +        +  YS LIDGL          
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525

Query: 171 ------------------------CKIGKLETAWELFQSLPRVGLMPNV----------- 195
                                   C+  + ++   L +     GLM              
Sbjct: 526 RLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRH 585

Query: 196 -----VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                  Y+++IHG C  G + KA      +   G +PN  +  +L+ G
Sbjct: 586 WKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRG 634



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 15/235 (6%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  L   M+++GV P+A  YS+LI G C    +  A ELF  M   G   +  TY TL
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL--------- 112
           I+G+CK  +V+++L+L+ EM+ KG+ P VVTY+ L  GL +  + + A +L         
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536

Query: 113 ------FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
                 ++ + H    AE  +    + G    G + +A ++++++     +L    YS L
Sbjct: 537 VPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVL 596

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           I G C+ G +  A    + L R G  PN  +   ++ G   +G   +A ++  ++
Sbjct: 597 IHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 6/146 (4%)

Query: 25  TLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
            L+ GF + G +++A +++ SM       +   Y+ LI+G+C+  ++ ++L+ + ++L  
Sbjct: 560 ALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRC 619

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN--GYIV 142
           G  P   +  +L  GLFE      A  +  E+ +    A+  T    ID   K   GY  
Sbjct: 620 GFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEGVGYFQ 679

Query: 143 EAAELFRTLRVLKCELGIEAYSCLID 168
              EL     + K  L +E ++C++ 
Sbjct: 680 AQGELC----MQKPALFVEHWNCMMS 701


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 149/259 (57%), Gaps = 1/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + D  I  G+ PN  VY+TL+DG+CL G+++ A  +F  M   G   NVV Y TL+
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ E+L KGI+P+   YN + HGLF+  +   A   F EM  S +A
Sbjct: 574 NGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIA 633

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  + GL KN    EA  LF+ L  +  ++ I   + +I G+ +I ++E A +L
Sbjct: 634 MDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDL 693

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV-APNCVTFNTLMLGCI 241
           F S+ R GL+P+VVTY+IM+     +G +++A D+F  ME  G   PN    N ++   +
Sbjct: 694 FASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELL 753

Query: 242 RNNETSKVVELLHRMDERN 260
              E  +    L ++DER+
Sbjct: 754 EKREIVRAGTYLSKIDERS 772



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 135/254 (53%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           + L +LM+  G+ P++ +++ LI  +   G +DRA  +F  M   G   +VVTY+T+I  
Sbjct: 376 TELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAA 435

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
            C+   +++++  +++M+ +G+ P++ TY+ L  G      +  A  L  +M +  +  +
Sbjct: 436 LCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD 495

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
              +N  I+ LCK G +++A  +F     +     +  Y+ L+DG C +GK+E A  +F 
Sbjct: 496 IGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFD 555

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +   G+ PNVV Y  +++G+C  G++D+   LF ++  KG+ P+   +N ++ G  +  
Sbjct: 556 VMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAG 615

Query: 245 ETSKVVELLHRMDE 258
            T       H M E
Sbjct: 616 RTVPAKVKFHEMTE 629



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 140/256 (54%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M + G    PNA  Y+T+IDGF   G++++A +LF  M   G   ++ TYN 
Sbjct: 197 QADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNC 256

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  CK + ++++  +  +M+ KG+ P   TYN+L +G     Q + A+++  +M    
Sbjct: 257 VVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG 316

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T N+ +  LCK+G I +A ++F ++ +   +  I +Y  +++G    G L    
Sbjct: 317 ILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLT 376

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +   G+ P+   +N++I  +   G +D+A  +F +M  +GV P+ VT++T++   
Sbjct: 377 ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436

Query: 241 IRNNETSKVVELLHRM 256
            R  +    VE  ++M
Sbjct: 437 CRIGKMDDAVEKFNQM 452



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 135/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ + + M ++GV P+   YST+I   C  G++D A E F  M   G   ++ TY+ 
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C   D+ ++ +L  +M++KG+RP +  +N + + L ++ +V  A  +FD      
Sbjct: 467 LIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIG 526

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      YNT +DG C  G +  A  +F  +     +  +  Y  L++G CK+G+++   
Sbjct: 527 LHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGL 586

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ P+   YNI++HG    G+   A   F +M   G+A +  T++ ++ G 
Sbjct: 587 SLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGL 646

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N+ + + + L   +   N
Sbjct: 647 FKNSCSDEAILLFKELHAMN 666



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 35/272 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + M+QRG+ P+   Y+ +++  C    +D+A  +   M   G + +  TYN+
Sbjct: 232 VNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNS 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           LI GY  T   +E++ +  +M S+GI P VVT N+L   L +  +++ A  +FD M    
Sbjct: 292 LIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKG 351

Query: 117 QHSD-------------------------------VAAETSTYNTFIDGLCKNGYIVEAA 145
           Q +D                               +A ++  +N  I    K G +  A 
Sbjct: 352 QKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRAT 411

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +F  +R    E  +  YS +I  LC+IGK++ A E F  +   G+ P++ TY+ +I GF
Sbjct: 412 IIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGF 471

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           C  G + KA DL L M  KG+ P+   FN ++
Sbjct: 472 CTHGDLLKAKDLVLQMMNKGMRPDIGCFNFII 503



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 131/266 (49%), Gaps = 9/266 (3%)

Query: 3   EASR---LLDLMIQR----GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMH 53
           EA R    LD+++ R    G  P+ F Y  ++   C   +  +A EL   M   G  C+ 
Sbjct: 155 EAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLP 214

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N V YNT+I+G+ K  DV ++ +L++EM+ +GI P + TYN + + L +   ++ A  + 
Sbjct: 215 NAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAIL 274

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            +M    V  +  TYN+ I G    G   EA  + + +        +   + L+  LCK 
Sbjct: 275 RQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKH 334

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GK++ A ++F S+   G   ++ +Y IM++G+   G +    +LF  M + G+AP+   F
Sbjct: 335 GKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIF 394

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           N L+    +     +   + + M E+
Sbjct: 395 NVLIKAYAKCGMLDRATIIFNEMREQ 420



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 35/192 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-----CMHNV 55
           M+ A R+ D+M+  G++PN  VY TL++G+C  G ID    LF  +   G      ++N+
Sbjct: 547 MENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNI 606

Query: 56  V------------------------------TYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           +                              TY+ ++ G  K    +E++ L+ E+ +  
Sbjct: 607 ILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMN 666

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           ++  + T N +  G+F+I +VE A  LF  +  S +     TY+  +  L K G + EA 
Sbjct: 667 VKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEAD 726

Query: 146 ELFRTLRVLKCE 157
           ++F ++    CE
Sbjct: 727 DMFSSMENAGCE 738



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 3/177 (1%)

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + PT+ TY  L       H+ +  L  F ++  + +  +T   +  + GLC+     EA 
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 146 E-LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL--MPNVVTYNIMI 202
           + L   +  L C   + +Y  ++  LC   K   A EL + +   G   +PN V YN +I
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            GF  +G ++KA DLF +M  +G++P+  T+N ++    +     K   +L +M ++
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDK 280


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 148/291 (50%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   ++ M  RG++P+AF+Y+ ++ G C   +++ AR LF  M       NVVTYNT
Sbjct: 25  IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT 84

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   +E +  L+ EM  KG  PT V+YNTL  G  +   +  A  +FD+M  S+
Sbjct: 85  LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN 144

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI------- 173
                 TY T IDGL K+G +  AAE+   +        +  YSCLIDG CK+       
Sbjct: 145 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 204

Query: 174 ----------------------------GKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                                        KLE A++LF+ + +    P VVTYN ++   
Sbjct: 205 KLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 264

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C+  Q+D AH L+ +M AKG  P+ +T++TL  G  R  +  +  EL+ +M
Sbjct: 265 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  167 bits (422), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 133/249 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           + R   P+A  Y  +++  C T  ID A      M   G   +   YN +++G C+ + V
Sbjct: 1   MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           EE+  L+ +M+ + I P VVTYNTL +GL +  ++E A +LF EM          +YNT 
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDG CK   +V A ++F  +    C   +  Y+ LIDGL K GK++ A E+   + + G+
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PNV TY+ +I GFC   ++D+AH L   M  +G+AP  VT+N L+    R ++     +
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 252 LLHRMDERN 260
           L   M +R 
Sbjct: 241 LFRGMAQRR 249



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 119/222 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M  +G  P    Y+TLIDGFC   ++  A+++F  M  + C+ NVVTY T
Sbjct: 95  IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 154

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K+  V+ +  +   M+ KG+ P V TY+ L  G  ++ +V+ A KL ++M    
Sbjct: 155 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 214

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TYN  ++ LC+   + +A +LFR +   +C   +  Y+ L+  LC   +L+ A 
Sbjct: 215 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 274

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
            L+  +   G  P+ +TY+ +  G    G++ +A +L   M+
Sbjct: 275 RLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 83/152 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ +LD M+++GV PN   YS LIDGFC    +D A +L   M   G    VVTYN L+N
Sbjct: 168 AAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLN 227

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C+   +E++  L+  M  +   PTVVTYNTL   L    Q++ A +L+ EM       
Sbjct: 228 SLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPP 287

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           +  TY+T   GL + G + EA EL   +++ K
Sbjct: 288 DAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 319


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/253 (39%), Positives = 142/253 (56%), Gaps = 2/253 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  MI + + P+ + +S LID  C  G+   A+++F +M   G   NV +YN +IN
Sbjct: 204 AFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMIN 261

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK K V+E++NL  EML K + P  VTYN+L  GL +  ++  AL L +EM H    A
Sbjct: 262 GLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPA 321

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY + +D LCKN  + +A  LF  ++    +  +  Y+ LIDGLCK G+L+ A ELF
Sbjct: 322 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELF 381

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q L   G   +V TY +MI G C +G  D+A  +   ME  G  PN VTF  ++      
Sbjct: 382 QHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 441

Query: 244 NETSKVVELLHRM 256
           +E  K  +LLH M
Sbjct: 442 DENDKAEKLLHEM 454



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++   M+Q GV PN + Y+ +I+G C    +D A  L   M     + + VTYN+LI+
Sbjct: 237 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 296

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK+  +  +LNL +EM  +G    VVTY +L   L +   ++ A  LF +M+   +  
Sbjct: 297 GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 356

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   IDGLCK G +  A ELF+ L V  C + +  Y+ +I GLCK G  + A  + 
Sbjct: 357 TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIK 416

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
             +   G +PN VT+ I+I       + DKA  L  +M AKG+
Sbjct: 417 SKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 133/253 (52%), Gaps = 2/253 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  +++ G  PN   ++TL+ G CL GE+ +       +       N V+Y TL+NG C
Sbjct: 67  LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           KT +   ++ L   +  +  RP VV Y+ +  GL +   V  A  L+ EM   ++     
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT I   C  G ++ A  L   + +      +  +S LID LCK GK   A ++F ++
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAM 244

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            ++G+ PNV +YNIMI+G C   ++D+A +L  +M  K + P+ VT+N+L+ G  ++   
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 304

Query: 247 SKVVELLHRMDER 259
           +  + L++ M  R
Sbjct: 305 TSALNLMNEMHHR 317



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 5/260 (1%)

Query: 3   EASRLL---DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           E  +LL   D ++ +  + N   Y TL++G C TGE   A +L   ++      NVV Y+
Sbjct: 95  EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +I+G CK K V E+ +LYSEM ++ I P V+TYNTL        Q+  A  L  EM   
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++  +  T++  ID LCK G    A ++F  +  +     + +Y+ +I+GLCK  +++ A
Sbjct: 215 NINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 272

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L + +    ++P+ VTYN +I G C  G++  A +L  +M  +G   + VT+ +L+  
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 332

Query: 240 CIRNNETSKVVELLHRMDER 259
             +N    K   L  +M ER
Sbjct: 333 LCKNQNLDKATALFMKMKER 352



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 2/212 (0%)

Query: 45  SMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
            MD+ G   N+VT + LIN +C    +  S +L  ++L  G  P  +T+ TL  GL    
Sbjct: 35  QMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKG 94

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +V+  L   D++          +Y T ++GLCK G    A +L R +        +  YS
Sbjct: 95  EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +IDGLCK   +  A++L+  +    + PNV+TYN +I  FC  GQ+  A  L  +M  K
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            + P+  TF+ L+    +  + +K  ++ H M
Sbjct: 215 NINPDVYTFSILIDALCKEGKNAK--QIFHAM 244


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 145/258 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+PN   YSTLIDG+CL G++D A +L  SM   G   + VTYNTLI
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC+   ++++L L+ EM+S G+ P ++TYN +  GLF   +   A +L+  +  S   
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K+G+ + A +L
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+PN  TY +M       G +++   LF  ME  G   +    N ++   ++
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQ 733

Query: 243 NNETSKVVELLHRMDERN 260
             E ++    L  +DE++
Sbjct: 734 RGEITRAGTYLSMIDEKH 751



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 140/250 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G+ P+  V++ LI  +    ++D A  +F  M  +G   NVVTY  +I
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK+  V++++  + +M+ +G+ P ++ Y +L H L    + + A +L  EM    + 
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T  +N+ I   CK G ++E+ +LF  +  +  +  +  YS LIDG C  GK++ A +L
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+  VG+ P+ VTYN +I+G+C   +MD A  LF +M + GV+PN +T+N ++ G   
Sbjct: 534 LSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 593

Query: 243 NNETSKVVEL 252
              T+   EL
Sbjct: 594 TRRTAAAKEL 603



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 132/257 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L+  M+ RG+  N   ++++I   C  G +  + +LF  M   G   NV+TY+TL
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    ++E+  L S M S G++P  VTYNTL +G   + +++ AL LF EM  S V
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    TYN  + GL        A EL+  +     +L +  Y+ ++ GLCK    + A  
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +FQ+L    L     T+NIMI      G+ D+A DLF+   + G+ PN  T+  +    I
Sbjct: 638 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697

Query: 242 RNNETSKVVELLHRMDE 258
                 ++ +L   M++
Sbjct: 698 GQGLLEELDQLFFSMED 714



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 129/258 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A      M+ R + P+   YS++I   C    +D+A E+  +M  NG M N +TYN++
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC ++  +E++    +M S G+ P VVTYN+L   L +  +   A K+FD M    +
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             + +TY T + G    G +VE   L   +           ++ LI    K  K++ A  
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + + GL PNVVTY  +I   C  G +D A   F  M  +G+ PN + + +L+    
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452

Query: 242 RNNETSKVVELLHRMDER 259
             ++  K  EL+  M +R
Sbjct: 453 IFDKWDKAEELILEMLDR 470



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +   M Q G+ PN   Y  +I   C +G +D A   F  M   G   N++ Y +
Sbjct: 387 VDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C     +++  L  EML +GI    + +N++ H   +  +V  + KLFD M    
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY+T IDG C  G + EA +L  ++  +  +     Y+ LI+G C++ +++ A 
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ PN++TYNI++ G  +  +   A +L++ +   G      T+N ++ G 
Sbjct: 567 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626

Query: 241 IRNNETSKVVELLHRM 256
            +NN T + + +   +
Sbjct: 627 CKNNLTDEALRMFQNL 642



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 5/250 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  G+ PN  VY++LI   C+  + D+A EL + M   G   N + +N+
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P V+TY+TL  G     +++ A KL   M    
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT I+G C+   + +A  LF+ +        I  Y+ ++ GL    +   A 
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  + + G    + TYNI++HG C +   D+A  +F ++    +     TFN +M+G 
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN-IMIGA 660

Query: 241 I----RNNET 246
           +    RN+E 
Sbjct: 661 LLKVGRNDEA 670



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 139/326 (42%), Gaps = 70/326 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L  M++ GV PN   Y++++ G+C + +   A      M  +G   +VVTYN+
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------LFEIH---------- 104
           L++  CK     E+  ++  M  +G+ P + TY TL  G      L E+H          
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 105 -------------------QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                              +V+ A+ +F +M+   +     TY   I  LCK+G + +A 
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE------------------------ 181
             F  +        I  Y+ LI  LC   K + A E                        
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486

Query: 182 -----------LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
                      LF  + R+G+ PNV+TY+ +I G+C  G+MD+A  L   M + G+ P+C
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
           VT+NTL+ G  R +     + L   M
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEM 572



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 3/238 (1%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           EA  LL +M      G  P+   Y+T+I+GF   G+ D+A   +  M       +VVTY+
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYS 235

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++I   CK + +++++ + + M+  G+ P  +TYN++ HG     Q + A+    +M+  
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSD 295

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V  +  TYN+ +D LCKNG   EA ++F ++     E  I  Y  L+ G    G L   
Sbjct: 296 GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM 355

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             L   + R G+ P+   +NI+I  +    ++D+A  +F  M   G+ PN VT+  ++
Sbjct: 356 HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 3/260 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTY 58
           D    +L  M +    P+ F  + L+ G C       A EL   M  +   G   +VV+Y
Sbjct: 140 DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
            T+ING+ K  D +++ + Y EML + I P VVTY+++   L +   ++ A+++   M  
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK 259

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + V     TYN+ + G C +    EA    + +R    E  +  Y+ L+D LCK G+   
Sbjct: 260 NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A ++F S+ + GL P++ TY  ++ G+   G + + H L   M   G+ P+   FN L+ 
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 239 GCIRNNETSKVVELLHRMDE 258
              +  +  + + +  +M +
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQ 399



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 4/248 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P    Y  LI   C  G +D       ++   G     +T+  L+ G C  K   +++
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 76  NLY-SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHSDVAAETSTYNTF 131
           ++    M      P V +   L  GL + ++ + AL+L   M   +    A +  +Y T 
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+G  K G   +A   +  +   +    +  YS +I  LCK   ++ A E+  ++ + G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           MPN +TYN ++HG+C+  Q  +A      M + GV P+ VT+N+LM    +N  +++  +
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 252 LLHRMDER 259
           +   M +R
Sbjct: 323 IFDSMTKR 330



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 35/180 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  L   M+  GV PN   Y+ ++ G   T     A+EL+V +  +G    + TYN 
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNI 621

Query: 61  LINGYCKTKDVEESLNLYSEML-----------------------------------SKG 85
           +++G CK    +E+L ++  +                                    S G
Sbjct: 622 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNG 681

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + P   TY  +   +     +E   +LF  M+ +    ++   N  +  L + G I  A 
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741



 Score = 38.1 bits (87), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 53/139 (38%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA R+   +    ++     ++ +I      G  D A++LFV+   NG + N  TY  +
Sbjct: 633 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
                    +EE   L+  M   G        N +   L +  ++  A      +     
Sbjct: 693 AENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 752

Query: 122 AAETSTYNTFIDGLCKNGY 140
           + E ST + FID L    Y
Sbjct: 753 SLEASTASLFIDLLSGGKY 771


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/257 (36%), Positives = 139/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++  MI  G  P+ F Y++LI  +CL  +++ A  +F  M   GC+ ++V + +LI
Sbjct: 305 QAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLI 364

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K++ + ++L  EM   G  P VVT+ TL  G  +  +   A +LF  M      
Sbjct: 365 HGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQV 424

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T    +DGLCK   + EA  L   +     +L I  YS L+DG+C  GKL  AWEL
Sbjct: 425 PNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWEL 484

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SLP  GL  NV TY IMI G C  G +DKA DL ++ME  G  P+  T+N  + G + 
Sbjct: 485 FSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLT 544

Query: 243 NNETSKVVELLHRMDER 259
             E ++ ++ L  M ++
Sbjct: 545 KKEIARSIKYLTIMRDK 561



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 131/293 (44%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+D M +     + + Y  LI+G C TG+   A E    M+      NVV Y+T++
Sbjct: 165 QAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIM 224

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V E+LNL SEM  KG+RP +VTY  L  GL    + +    L DEM    + 
Sbjct: 225 DGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMR 284

Query: 123 AETSTYNTFIDGLCKNGYIV-----------------------------------EAAEL 147
            +  T N  +D  CK G ++                                   EA  +
Sbjct: 285 LDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +    C   I  ++ LI G CK   +     L + + ++G +P+VVT+  +I GFC 
Sbjct: 345 FHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQ 404

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G+   A +LFL+M   G  PN  T   ++ G  + N  S+ V L   M++ N
Sbjct: 405 AGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSN 457



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 123/252 (48%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G+ P     + LI+G C+ G + +A  L   M+      +V TY  LING C
Sbjct: 134 VLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLC 193

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           KT D   ++    +M  +  +P VV Y+T+  GL +   V  AL L  EM    V     
Sbjct: 194 KTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLV 253

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   I GLC  G   E   L   +  +   L ++  + L+D  CK GK+  A  +   +
Sbjct: 254 TYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFM 313

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  P+V TYN +IH +C   +M++A  +F  M ++G  P+ V F +L+ G  ++   
Sbjct: 314 ILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNI 373

Query: 247 SKVVELLHRMDE 258
           +KV+ LL  M +
Sbjct: 374 NKVMHLLEEMAK 385



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 118/232 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA R+  LM+ RG  P+  V+++LI G+C    I++   L   M   G + +VVT+ T
Sbjct: 338 MNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTT 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+      +  L+  M   G  P + T   +  GL + + +  A+ L + M+ S+
Sbjct: 398 LIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSN 457

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y+  +DG+C  G +  A ELF +L     ++ +  Y+ +I GLCK G L+ A 
Sbjct: 458 LDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAE 517

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +L  ++   G +P+  TYN+ + G     ++ ++      M  KG + +  T
Sbjct: 518 DLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAAT 569



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 3/205 (1%)

Query: 33  TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
           T  I   + +F S+ I     + +T N +IN  C+ K V    ++   M   G+ PTV+T
Sbjct: 93  TTAISLVKHIFSSLGIEA---DTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMT 149

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
              L +GL     V  A+ L D M+      +  TY   I+GLCK G  + A E  R + 
Sbjct: 150 LTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKME 209

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
               +  +  YS ++DGLCK G +  A  L   +   G+ PN+VTY  +I G CN G+  
Sbjct: 210 ERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWK 269

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLM 237
           +   L  +M   G+  +  T N L+
Sbjct: 270 ETGSLLDEMIKMGMRLDLQTLNILV 294



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 3/242 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  +    + +I+  C    +     +  +M   G    V+T   LING C   +V ++
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQA 166

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L   M        V TY  L +GL +      A++   +M+  +       Y+T +DG
Sbjct: 167 VGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDG 226

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+G + EA  L   +        +  Y+CLI GLC  G+ +    L   + ++G+  +
Sbjct: 227 LCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLD 286

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM-LGCIRN--NETSKVVE 251
           + T NI++  FC +G++ +A  +   M   G  P+  T+N+L+ + C++N  NE  +V  
Sbjct: 287 LQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 252 LL 253
           L+
Sbjct: 347 LM 348



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 7/237 (2%)

Query: 30  FCLTGE---IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK-G 85
            C +G+   ID A +LF  M     + +V  +  L+    + K    +++L   + S  G
Sbjct: 48  LCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLG 107

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I    +T N + + L  +  V     +   M    +     T    I+GLC  G + +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAV 167

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L   +  ++  L +  Y  LI+GLCK G    A E  + +      PNVV Y+ ++ G 
Sbjct: 168 GLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI---RNNETSKVVELLHRMDER 259
           C DG + +A +L  +M  KGV PN VT+  L+ G     R  ET  +++ + +M  R
Sbjct: 228 CKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMR 284



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M +  +  N  +YS L+DG C  G+++ A ELF S+   G   NV TY  
Sbjct: 443 LSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTI 502

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G CK   ++++ +L   M   G  P   TYN    GL    ++  ++K    M+   
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
            + + +T    I+ L  N       E F   R
Sbjct: 563 FSVDAATTEITINYLSTNEGDTRIREFFFPKR 594



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           ++  ++ AL LF  M           +   +  + +  +   A  L + +      LGIE
Sbjct: 53  KVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIF---SSLGIE 109

Query: 162 A----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           A     + +I+ LC++  +   + +  ++ ++GL P V+T   +I+G C  G + +A  L
Sbjct: 110 ADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGL 169

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              ME      +  T+  L+ G  +  +T   VE L +M+ERN
Sbjct: 170 VDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERN 212


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/261 (37%), Positives = 147/261 (56%), Gaps = 4/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++ D  ++RG  P+   Y+ LI+GFC   ++D A+ +   M     + +VVTYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL-FEIHQVEHALKLFDEMQHS 119
           L+NG CK   V+E+  L   ++ KG  P V+TY+TL  GL  E+  V  ALKLF  +   
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               E  TYN  IDGL K   + EA ELF  L     E     Y+  IDGLCK G++E A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             + + +   G +P+VV++N +I+G C + ++D+A  L   MEAKG +PN ++FNTL+ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R  +  K +     M +R 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRG 318



 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 133/240 (55%), Gaps = 3/240 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   +++ G+ P+A  Y+  IDG C  G ++ A  +   MD  GC+ +VV++N 
Sbjct: 199 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 258

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK K V+E+  L S M +KG  P  +++NTL  G     + + A+  F EM    
Sbjct: 259 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318

Query: 121 VAAETSTYNTFIDGLCK---NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           V     TYN  +DGLCK    G I EA  LF  +        +  YS LIDGL K GKL+
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 378

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  L  ++   G +PNV TYN +I G C   ++D+A +LF+ M  KG  P+ +T+ T++
Sbjct: 379 DARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 140/258 (54%), Gaps = 4/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+L  M+   + P+   Y++L++G C  G +D AR L V     G   NV+TY+T
Sbjct: 96  LDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYST 152

Query: 61  LINGYCKT-KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G C+  + V E+L L+  +L +G  P V TYN L  GL +  +V  A +LF  +   
Sbjct: 153 LISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKH 212

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TY  FIDGLCK G + +A  + + +    C   + +++ +I+GLCK  +++ A
Sbjct: 213 GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 272

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L   +   G  PN +++N +I G C  G+  KA   F +M  +GV P  VT+N L+ G
Sbjct: 273 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 332

Query: 240 CIRNNETSKVVELLHRMD 257
             +  +  ++ E +   D
Sbjct: 333 LCKARQEGRIKEAITLFD 350



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 143/283 (50%), Gaps = 33/283 (11%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G  PN   Y+ L+ G C  G +  A+ L+  M   G   +VVTYNTL++G+CK  +
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E+L ++   + +G  P VVTYN L +G  +  +++ A ++   M   ++  +  TYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 131 FIDGLCKNGYIVEA--------------------AELFRTLR-----------VLK--CE 157
            ++GLCKNG + EA                    + L R LR           VLK   E
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             +  Y+ LIDGL K  ++  A+ELF  L + GL P+ +TY + I G C  G+++ A  +
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             DM+ KG  P+ V+ N ++ G  +     +   LL  M+ + 
Sbjct: 241 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 138/263 (52%), Gaps = 3/263 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +L   ++++G  P    Y+ LIDG      ++ A ELF  +  +G   + +TY  
Sbjct: 164 VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 223

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G CK   VE++L +  +M  KG  P VV++N + +GL +  +V+ A  L   M+   
Sbjct: 224 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI---GKLE 177
            +    ++NT I G C+ G   +A   F+ +     +  +  Y+ L+DGLCK    G+++
Sbjct: 284 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 343

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  LF ++   G +P+VVTY+ +I G    G++D A  L   MEAKG  PN  T+N+L+
Sbjct: 344 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 403

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G     +  + +EL   M E+ 
Sbjct: 404 SGLCGLEKVDEALELFVAMVEKG 426



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 41/63 (65%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RLL  M  +G  PN + Y++LI G C   ++D A ELFV+M   GC+ + +TY T
Sbjct: 377 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGT 436

Query: 61  LIN 63
           +I+
Sbjct: 437 IIS 439


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  180 bits (457), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 150/259 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +L +M++  ++P+   Y++L+DG+C   ++++A+++F SM   G + NV  Y T
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG+CK K V+E++NL+ EM  + I P VVTY++L  GL ++ ++ +ALKL DEM    
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ +D LCKN ++ +A  L   L+       +  Y+ LI GLC+ G+LE A 
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ L   G   +V  Y +MI GFC+ G  DKA  L   ME  G  PN  T+  ++L  
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL 526

Query: 241 IRNNETSKVVELLHRMDER 259
              +E     +LL  M  R
Sbjct: 527 FEKDENDTAEKLLREMIVR 545



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 139/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    D ++ +G   +   Y TLI+G C  G I  A +L   +D      N V YN +I
Sbjct: 149 QALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 208

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K V ++ +LYS+M++K I P V TYN L  G   + ++ +A+ LF++M+  ++ 
Sbjct: 209 DNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENIN 268

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +DG CK G + +A  +   +     +  +  Y+ L+DG C I K+  A ++
Sbjct: 269 PNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDI 328

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+   G++ NV  Y  M++GFC    +D+A +LF +M  + + PN VT+++L+ G  +
Sbjct: 329 FDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCK 388

Query: 243 NNETSKVVELLHRMDER 259
                  ++L+  M +R
Sbjct: 389 LGRIFYALKLVDEMHDR 405



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 130/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+ + + P+ F Y+ LI GF    +++ A +LF  M       NV T+N 
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   V ++  + + M+   I+P VVTYN+L  G   I++V  A  +FD M    
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG 336

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A    Y T ++G CK   + EA  LF  +R  K    +  YS LIDGLCK+G++  A 
Sbjct: 337 VIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYAL 396

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G  PN+VTY+ ++   C +  +DKA  L  +++ +G+ P+  T+  L+ G
Sbjct: 397 KLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKG 455



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 138/258 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L + M +  + PN + ++ L+DGFC  G+++ A+ +   M  +    +VVTYN+
Sbjct: 252 LNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNS 311

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC    V ++ +++  M S G+   V  Y T+ +G  +I  V+ A+ LF+EM+   
Sbjct: 312 LMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK 371

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ IDGLCK G I  A +L   +        I  YS ++D LCK   ++ A 
Sbjct: 372 IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAI 431

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L  +L   G+ P++ TY I+I G C  G+++ A ++F D+  KG   +   +  ++ G 
Sbjct: 432 ALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGF 491

Query: 241 IRNNETSKVVELLHRMDE 258
                  K + LL +M++
Sbjct: 492 CDKGFFDKALALLSKMED 509



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 116/226 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M   GV  N  +Y+T+++GFC    +D A  LF  M     + NVVTY++
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +  +L L  EM  +G  P +VTY+++   L + H V+ A+ L   ++   
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I GLC++G + +A  +F  L V    L + AY+ +I G C  G  + A 
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   +   G +PN  TY ++I       + D A  L  +M  +G+
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 124/242 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + F ++ LI+ F   G    +  +F  +   G     +T+NTLI G C    + ++
Sbjct: 91  GIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQA 150

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+ + +++++G     V+Y TL +GL ++ ++  AL+L   +    V      YN  ID 
Sbjct: 151 LHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDN 210

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           +CK   + +A +L+  +   +    +  Y+ LI G   + KL  A +LF  + +  + PN
Sbjct: 211 MCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPN 270

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T+NI++ GFC +G+++ A  +   M    + P+ VT+N+LM G    N+ +K  ++  
Sbjct: 271 VYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFD 330

Query: 255 RM 256
            M
Sbjct: 331 SM 332



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 4/242 (1%)

Query: 2   DEASRLLD----LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           DE + L+     L++ +   P  F ++ ++           A  L   M++NG   +  T
Sbjct: 39  DEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFT 98

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N LIN + +      S ++++++L KG  PT +T+NTL  GL     +  AL   D++ 
Sbjct: 99  FNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVV 158

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                 +  +Y T I+GLCK G I  A +L + +     +     Y+ +ID +CK   + 
Sbjct: 159 AQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVN 218

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A++L+  +    + P+V TYN +I GF    +++ A DLF  M+ + + PN  TFN L+
Sbjct: 219 DAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILV 278

Query: 238 LG 239
            G
Sbjct: 279 DG 280



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 96/192 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + M  R + PN   YS+LIDG C  G I  A +L   M   G   N+VTY++
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK   V++++ L + +  +GIRP + TY  L  GL +  ++E A  +F+++    
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y   I G C  G+  +A  L   +    C    + Y  +I  L +  + +TA 
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAE 536

Query: 181 ELFQSLPRVGLM 192
           +L + +   GL+
Sbjct: 537 KLLREMIVRGLL 548


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  180 bits (457), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 148/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++L LM+Q G  P+ + YST+I+  C  GE++ A+ +   M  +GC+ +  T+NT
Sbjct: 317 VDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNT 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   C    +EE+L+L  E+  KG+ P V T+N L + L ++     A++LF+EM+ S 
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  ID LC +G + +A +L + + V  C      Y+ +IDGLCK  ++E A 
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +   G+  N +T+N +I G CN  ++D A +L   M ++G+ PN VT+N+++   
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHY 556

Query: 241 IRNNETSKVVELLHRM 256
            +    SK  ++L  M
Sbjct: 557 CKQGNISKAADILQTM 572



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 125/239 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RL + M   G  P+   Y+ LID  C +G++ +A +L   M+++GC  + VTYNT+I+
Sbjct: 425 AVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIID 484

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK + +EE+  ++ +M   GI    +T+NTL  GL    +++ A +L D+M    +  
Sbjct: 485 GLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQP 544

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ +   CK G I +AA++ +T+     E+ +  Y+ LI+GLCK  + + A +L 
Sbjct: 545 NNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLL 604

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           + +   G+ P    YN +I           A  LF +M   G  P+  T+  +  G  R
Sbjct: 605 RGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCR 663



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 125/245 (51%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I  G  P+   +ST ++G C  G +D A ++   M   GC  +V TY+T+IN  C   ++
Sbjct: 293 IADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGEL 352

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           EE+  + ++M+  G  P   T+NTL   L   +Q+E AL L  E+    ++    T+N  
Sbjct: 353 EEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNIL 412

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+ LCK G    A  LF  ++   C      Y+ LID LC  GKL  A +L + +   G 
Sbjct: 413 INALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGC 472

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             + VTYN +I G C   ++++A ++F  M+  G+  N +TFNTL+ G           E
Sbjct: 473 PQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAE 532

Query: 252 LLHRM 256
           L+ +M
Sbjct: 533 LVDQM 537



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 133/257 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A RL   M + G  P +   + LI+G+C  G +  A         +G   + VT++T
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +NG C+   V+ +L +   ML +G  P V TY+T+ + L    ++E A  + ++M  S 
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T+T+NT I  LC    + EA +L R L V      +  ++ LI+ LCK+G    A 
Sbjct: 367 CLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAV 426

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G  P+ VTYNI+I   C+ G++ KA DL  +ME  G   + VT+NT++ G 
Sbjct: 427 RLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGL 486

Query: 241 IRNNETSKVVELLHRMD 257
            +     +  E+  +MD
Sbjct: 487 CKRRRIEEAEEVFDQMD 503



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 128/258 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   +  +G+ PN + ++ LI+  C  G+   A  LF  M  +GC  + VTYN 
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C +  + ++L+L  EM   G   + VTYNT+  GL +  ++E A ++FD+M  + 
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTG 506

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+NT IDGLC    I +AAEL   +     +     Y+ ++   CK G +  A 
Sbjct: 507 IGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAA 566

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ Q++   G   +VVTY  +I+G C   +   A  L   M  KG+ P    +N ++   
Sbjct: 567 DILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSL 626

Query: 241 IRNNETSKVVELLHRMDE 258
            R N     + L   M E
Sbjct: 627 FRGNNGRDALSLFREMTE 644



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 120/242 (49%), Gaps = 1/242 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  M   G   +   Y+T+IDG C    I+ A E+F  MD+ G   N +T+NT
Sbjct: 457 LAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNT 516

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C  + ++++  L  +M+S+G++P  VTYN++     +   +  A  +   M  + 
Sbjct: 517 LIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANG 576

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK      A +L R +R+   +   +AY+ +I  L +      A 
Sbjct: 577 FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDAL 636

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +  VG  P+  TY I+  G C   G + +A D  ++M   G  P   +F  L  G
Sbjct: 637 SLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEG 696

Query: 240 CI 241
            +
Sbjct: 697 LL 698



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 122/246 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  +G+ P+   ++T+ID  C   +   A  +   M       +  T+ TL+ G+ +   
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E +L L + M   G  PT VT N L +G  ++ +V  AL    +        +  T++T
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F++GLC+NG++  A ++   +    CE  +  YS +I+ LC  G+LE A  +   +   G
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +P+  T+N +I   C + Q+++A DL  ++  KG++PN  TFN L+    +  +    V
Sbjct: 367 CLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAV 426

Query: 251 ELLHRM 256
            L   M
Sbjct: 427 RLFEEM 432



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 1/213 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  + D M   G+  NA  ++TLIDG C    ID A EL   M   G   N VTYN+
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNS 551

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++  YCK  ++ ++ ++   M + G    VVTY TL +GL +  + + ALKL   M+   
Sbjct: 552 ILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKG 611

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK-IGKLETA 179
           +      YN  I  L +     +A  LFR +  +        Y  +  GLC+  G ++ A
Sbjct: 612 MKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEA 671

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           ++    +   G +P   ++ ++  G  N G  D
Sbjct: 672 FDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDD 704



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 1/199 (0%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           +D+ G   N   YN L+    +   ++   + Y+EM S+GI P VVT+NT+   L    Q
Sbjct: 152 LDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQ 211

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
              A+ + +EM   DVA + +T+ T ++G  + G I  A  L   +  + C       + 
Sbjct: 212 ARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNV 271

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI+G CK+G++  A    Q     G  P+ VT++  ++G C +G +D A  +   M  +G
Sbjct: 272 LINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG 331

Query: 226 VAPNCVTFNTLMLGCIRNN 244
             P+  T++T+ + C+ NN
Sbjct: 332 CEPDVYTYSTV-INCLCNN 349



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 3/201 (1%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSK--GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           L+    +  D E +L + +  L++  G+ P+   Y  +   L      +    L  EM+ 
Sbjct: 59  LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRR 118

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRT-LRVLKCELGIEAYSCLIDGLCKIGKLE 177
                      +FI    +     +A +L    L +   +   E Y+ L+  L +  K++
Sbjct: 119 EGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIK 178

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                +  +   G+ P+VVT+N +I   C   Q   A  +  +M +  VAP+  TF TLM
Sbjct: 179 LLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLM 238

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G +        + L  RM E
Sbjct: 239 EGFVEEGSIEAALRLKARMSE 259


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  180 bits (457), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 148/258 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L +LM++ GV+PN   Y+TLI+G+CL G++D A +L   M   G   N VTY+TLI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    +A ++F+ L ++  +L    ++ +ID L K+G+ + A +L
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+PN  TY +M       G +++   LFL ME  G   +    N ++   ++
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733

Query: 243 NNETSKVVELLHRMDERN 260
             E ++    L  +DE++
Sbjct: 734 RGEITRAGTYLSMIDEKH 751



 Score =  174 bits (440), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 148/256 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G+ P+ +V+S LI  +   G++D+A  +F  M   G   N VTY  +I
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK+  VE+++  + +M+ +G+ P  + YN+L HGL   ++ E A +L  EM    + 
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T  +N+ ID  CK G ++E+ +LF  +  +  +  +  Y+ LI+G C  GK++ A +L
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +  VGL PN VTY+ +I+G+C   +M+ A  LF +ME+ GV+P+ +T+N ++ G  +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 243 NNETSKVVELLHRMDE 258
              T+   EL  R+ E
Sbjct: 594 TRRTAAAKELYVRITE 609



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 132/235 (56%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L+  M+ RG+  N   ++++ID  C  G +  + +LF  M   G   NV+TYNTL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           INGYC    ++E++ L S M+S G++P  VTY+TL +G  +I ++E AL LF EM+ S V
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TYN  + GL +      A EL+  +     ++ +  Y+ ++ GLCK    + A +
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +FQ+L  + L     T+NIMI      G+ D+A DLF+   + G+ PN  T+  +
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 3/261 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTY 58
           D    +L  M + G  PN F Y+ L+ G C       A EL   M  +   G   +VV+Y
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
            T+ING+ K  D +++ + Y EML +GI P VVTYN++   L +   ++ A+++ + M  
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + V  +  TYN+ + G C +G   EA    + +R    E  +  YS L+D LCK G+   
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A ++F S+ + GL P + TY  ++ G+   G + + H L   M   G+ P+   F+ L+ 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 239 GCIRNNETSKVVELLHRMDER 259
                 +  + + +  +M ++
Sbjct: 380 AYANQGKVDQAMLVFSKMRQQ 400



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A      M+ RG+ P+   Y+++I   C    +D+A E+  +M  NG M + +TYN++
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC +   +E++    +M S G+ P VVTY+ L   L +  +   A K+FD M    +
Sbjct: 273 LHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             E +TY T + G    G +VE   L   +           +S LI      GK++ A  
Sbjct: 333 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAML 392

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + + GL PN VTY  +I   C  G+++ A   F  M  +G++P  + +N+L+ G  
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452

Query: 242 RNNETSKVVELLHRMDER 259
             N+  +  EL+  M +R
Sbjct: 453 TCNKWERAEELILEMLDR 470



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 129/240 (53%), Gaps = 7/240 (2%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           EA  LL +M      G  P+   Y+T+I+GF   G+ D+A   +  M   G + +VVTYN
Sbjct: 176 EALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYN 235

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++I   CK + +++++ + + M+  G+ P  +TYN++ HG     Q + A+    +M+  
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD 295

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLE 177
            V  +  TY+  +D LCKNG  +EA ++F ++  R LK E  I  Y  L+ G    G L 
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE--ITTYGTLLQGYATKGALV 353

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               L   + R G+ P+   ++I+I  + N G++D+A  +F  M  +G+ PN VT+  ++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 144/328 (43%), Gaps = 70/328 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L+ M++ GV P+   Y++++ G+C +G+   A      M  +G   +VVTY+ 
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------LFEIH---------- 104
           L++  CK     E+  ++  M  +G++P + TY TL  G      L E+H          
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 105 -------------------QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                              +V+ A+ +F +M+   +     TY   I  LCK+G + +A 
Sbjct: 367 IHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE------------------------ 181
             F  +       G   Y+ LI GLC   K E A E                        
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486

Query: 182 -----------LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
                      LF+ + R+G+ PNV+TYN +I+G+C  G+MD+A  L   M + G+ PN 
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDE 258
           VT++TL+ G  + +     + L   M+ 
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMES 574



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 127/249 (51%), Gaps = 3/249 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    + MI  G+ P   VY++LI G C   + +RA EL + M   G   N + +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P V+TYNTL +G     +++ A+KL   M    
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TY+T I+G CK   + +A  LF+ +        I  Y+ ++ GL +  +   A 
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL---M 237
           EL+  +   G    + TYNI++HG C +   D A  +F ++    +     TFN +   +
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661

Query: 238 LGCIRNNET 246
           L   RN+E 
Sbjct: 662 LKVGRNDEA 670



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 4/207 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL- 112
           ++ TY  LI   C+   ++        ++ KG R   + +  L  GL    +   A+ + 
Sbjct: 86  DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDG 169
              M          +YN  + GLC      EA EL   +   R       + +Y+ +I+G
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
             K G  + A+  +  +   G++P+VVTYN +I   C    MDKA ++   M   GV P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
           C+T+N+++ G   + +  + +  L +M
Sbjct: 266 CMTYNSILHGYCSSGQPKEAIGFLKKM 292



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 4/157 (2%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYS 164
           E A  +FDE+      A     N  +  + ++      +   R  R    E+  +   Y 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL-DMEA 223
            LI   C+ G+L+  +    ++ + G   + + +  ++ G C D +   A D+ L  M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM-DER 259
            G  PN  ++N L+ G    N + + +ELLH M D+R
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDR 188



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 91/257 (35%), Gaps = 74/257 (28%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID----------------------- 37
           MDEA +LL  M+  G++PN   YSTLI+G+C    ++                       
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586

Query: 38  ------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML--- 82
                        A+EL+V +  +G    + TYN +++G CK K  +++L ++  +    
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646

Query: 83  --------------------------------SKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
                                           S G+ P   TY  +   +     +E   
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +LF  M+ +    ++   N  +  L + G I  A      +      L     S  ID L
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-L 765

Query: 171 CKIGKLETAWELFQSLP 187
              GK +   E ++ LP
Sbjct: 766 LSGGKYQ---EYYRFLP 779



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 5/164 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++   +    ++  A  ++ +ID     G  D A++LFV+   NG + N  TY  +
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
                    +EE   L+  M   G        N +   L +  ++  A      +     
Sbjct: 693 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 752

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           + E ST + FID L    Y     E +R L   K +  IE+ SC
Sbjct: 753 SLEASTASLFIDLLSGGKY----QEYYRFLPE-KYKSFIESLSC 791


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 148/258 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L +LM++ GV+PN   Y+TLI+G+CL G++D A +L   M   G   N VTY+TLI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    +A ++F+ L ++  +L    ++ +ID L K+G+ + A +L
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+PN  TY +M       G +++   LFL ME  G   +    N ++   ++
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733

Query: 243 NNETSKVVELLHRMDERN 260
             E ++    L  +DE++
Sbjct: 734 RGEITRAGTYLSMIDEKH 751



 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 148/256 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G+ P+ +V+S LI  +   G++D+A  +F  M   G   N VTY  +I
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK+  VE+++  + +M+ +G+ P  + YN+L HGL   ++ E A +L  EM    + 
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T  +N+ ID  CK G ++E+ +LF  +  +  +  +  Y+ LI+G C  GK++ A +L
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +  VGL PN VTY+ +I+G+C   +M+ A  LF +ME+ GV+P+ +T+N ++ G  +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 243 NNETSKVVELLHRMDE 258
              T+   EL  R+ E
Sbjct: 594 TRRTAAAKELYVRITE 609



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 132/235 (56%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L+  M+ RG+  N   ++++ID  C  G +  + +LF  M   G   NV+TYNTL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           INGYC    ++E++ L S M+S G++P  VTY+TL +G  +I ++E AL LF EM+ S V
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TYN  + GL +      A EL+  +     ++ +  Y+ ++ GLCK    + A +
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +FQ+L  + L     T+NIMI      G+ D+A DLF+   + G+ PN  T+  +
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 3/261 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTY 58
           D    +L  M + G  PN F Y+ L+ G C       A EL   M  +   G   +VV+Y
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
            T+ING+ K  D +++ + Y EML +GI P VVTYN++   L +   ++ A+++ + M  
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + V  +  TYN+ + G C +G   EA    + +R    E  +  YS L+D LCK G+   
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A ++F S+ + GL P + TY  ++ G+   G + + H L   M   G+ P+   F+ L+ 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 239 GCIRNNETSKVVELLHRMDER 259
              +  +  + + +  +M ++
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQ 400



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 131/258 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A      M+ RG+ P+   Y+++I   C    +D+A E+  +M  NG M + +TYN++
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC +   +E++    +M S G+ P VVTY+ L   L +  +   A K+FD M    +
Sbjct: 273 LHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             E +TY T + G    G +VE   L   +           +S LI    K GK++ A  
Sbjct: 333 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + + GL PN VTY  +I   C  G+++ A   F  M  +G++P  + +N+L+ G  
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452

Query: 242 RNNETSKVVELLHRMDER 259
             N+  +  EL+  M +R
Sbjct: 453 TCNKWERAEELILEMLDR 470



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 144/328 (43%), Gaps = 70/328 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L+ M++ GV P+   Y++++ G+C +G+   A      M  +G   +VVTY+ 
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------LFEIH---------- 104
           L++  CK     E+  ++  M  +G++P + TY TL  G      L E+H          
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 105 -------------------QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                              +V+ A+ +F +M+   +     TY   I  LCK+G + +A 
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE------------------------ 181
             F  +       G   Y+ LI GLC   K E A E                        
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486

Query: 182 -----------LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
                      LF+ + R+G+ PNV+TYN +I+G+C  G+MD+A  L   M + G+ PN 
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDE 258
           VT++TL+ G  + +     + L   M+ 
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMES 574



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 7/240 (2%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           EA  LL +M      G  P+   Y+T+I+GF   G+ D+A   +  M   G + +VVTYN
Sbjct: 176 EALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYN 235

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++I   CK + +++++ + + M+  G+ P  +TYN++ HG     Q + A+    +M+  
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD 295

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLE 177
            V  +  TY+  +D LCKNG  +EA ++F ++  R LK E  I  Y  L+ G    G L 
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE--ITTYGTLLQGYATKGALV 353

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               L   + R G+ P+   ++I+I  +   G++D+A  +F  M  +G+ PN VT+  ++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 127/249 (51%), Gaps = 3/249 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    + MI  G+ P   VY++LI G C   + +RA EL + M   G   N + +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P V+TYNTL +G     +++ A+KL   M    
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TY+T I+G CK   + +A  LF+ +        I  Y+ ++ GL +  +   A 
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL---M 237
           EL+  +   G    + TYNI++HG C +   D A  +F ++    +     TFN +   +
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661

Query: 238 LGCIRNNET 246
           L   RN+E 
Sbjct: 662 LKVGRNDEA 670



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 4/207 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL- 112
           ++ TY  LI   C+   ++        ++ KG R   + +  L  GL    +   A+ + 
Sbjct: 86  DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDG 169
              M          +YN  + GLC      EA EL   +   R       + +Y+ +I+G
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
             K G  + A+  +  +   G++P+VVTYN +I   C    MDKA ++   M   GV P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
           C+T+N+++ G   + +  + +  L +M
Sbjct: 266 CMTYNSILHGYCSSGQPKEAIGFLKKM 292



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 4/157 (2%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYS 164
           E A  +FDE+      A     N  +  + ++      +   R  R    E+  +   Y 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL-DMEA 223
            LI   C+ G+L+  +    ++ + G   + + +  ++ G C D +   A D+ L  M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM-DER 259
            G  PN  ++N L+ G    N + + +ELLH M D+R
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDR 188



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 91/257 (35%), Gaps = 74/257 (28%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID----------------------- 37
           MDEA +LL  M+  G++PN   YSTLI+G+C    ++                       
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586

Query: 38  ------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML--- 82
                        A+EL+V +  +G    + TYN +++G CK K  +++L ++  +    
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646

Query: 83  --------------------------------SKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
                                           S G+ P   TY  +   +     +E   
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +LF  M+ +    ++   N  +  L + G I  A      +      L     S  ID L
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-L 765

Query: 171 CKIGKLETAWELFQSLP 187
              GK +   E ++ LP
Sbjct: 766 LSGGKYQ---EYYRFLP 779



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 5/164 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++   +    ++  A  ++ +ID     G  D A++LFV+   NG + N  TY  +
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
                    +EE   L+  M   G        N +   L +  ++  A      +     
Sbjct: 693 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 752

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           + E ST + FID L    Y     E +R L   K +  IE+ SC
Sbjct: 753 SLEASTASLFIDLLSGGKY----QEYYRFLPE-KYKSFIESLSC 791


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 98/257 (38%), Positives = 138/257 (53%), Gaps = 3/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A   L  M +R V P+ F Y+ LIDG C   + D+A E+   M   G   + VT+N++
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G CK    E + +L + M  +  RP+  TYNTL  GL +   V+ A  L DE   S  
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+   DGLCK G I EA EL + +    C   +  Y+ LIDGLCK  K E A+E
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L +SL   G +P+VVTY I++ G C +G++DKA  +   M  +G  P+ +T+  LM G  
Sbjct: 423 LLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 482

Query: 242 RNNETSKVVELLHRMDE 258
           R   T +V E  H   E
Sbjct: 483 R---TGRVDEAHHIFKE 496



 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 136/256 (53%), Gaps = 4/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +LD    RG +P   VY+ L   FC TG +  A E+F ++       + + YN 
Sbjct: 176 IDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNA 231

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C+  D + +L    EM  + + P V TYN L  GL +  + + A ++  EM    
Sbjct: 232 IIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRG 291

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +T T+N+ +DGLCK G    A  L   +    C      Y+ LI GLCK   ++ A 
Sbjct: 292 VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 351

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L       G +P+VVTY+I+  G C  G++D+A +L  +M  KG  PN VT+NTL+ G 
Sbjct: 352 DLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGL 411

Query: 241 IRNNETSKVVELLHRM 256
            + ++T K  ELL  +
Sbjct: 412 CKASKTEKAYELLESL 427



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 131/256 (51%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L+D  +  G  P+   YS L DG C  G ID A EL   M   GC  N+VTYNT
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK    E++  L   ++S G  P VVTY  +  GL +  +++ ALK+ + M    
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   ++GLC+ G + EA  +F+ +    C     AY  L++G CK  + + A 
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +      P +  YN ++ G+C +G++D+  ++F DM  +G  PN  T+N +M G 
Sbjct: 527 KVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 583

Query: 241 IRNNETSKVVELLHRM 256
            ++ +  +    L  M
Sbjct: 584 CKHGKVDEAFPFLESM 599



 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 138/258 (53%), Gaps = 7/258 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++++ M++RG  P+   Y+ L++G C TG +D A  +F  M    C  + + Y +
Sbjct: 452 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 511

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           L+NGYCK+   +E+     + +  GIR  P +  YN L  G  +  +++    +F++M  
Sbjct: 512 LVNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMAC 566

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                   TYN  +DGLCK+G + EA     ++    C   + +Y+ +IDGL K  K + 
Sbjct: 567 RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKE 626

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A ++   + + G+ P+ VTYN ++  FC + + D A  +  +M   GV P+ VT+NTL+ 
Sbjct: 627 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 686

Query: 239 GCIRNNETSKVVELLHRM 256
           G  + N      EL+H M
Sbjct: 687 GLSQTNRLGDAYELMHEM 704



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 123/242 (50%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+A  Y+ +I G C   + D A E    M+      +V TYN LI+G CK    +++  +
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEM 283

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EM+ +G+ P  VT+N++  GL +  + E A  L   M   +      TYNT I GLCK
Sbjct: 284 LHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCK 343

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +  A +L            +  YS L DGLCK G+++ A+EL + +   G  PN+VT
Sbjct: 344 QQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVT 403

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN +I G C   + +KA++L   + + G  P+ VT+  ++ G  +     K ++++  M 
Sbjct: 404 YNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 463

Query: 258 ER 259
           +R
Sbjct: 464 KR 465



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 5/259 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++LD MIQ G+ P+A  Y+TL+  FC     D A  +  +M   G   + VTYNTLI
Sbjct: 626 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 685

Query: 63  NGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +G  +T  + ++  L  EML  G +     TYNT+   L +   ++ AL L D M    V
Sbjct: 686 SGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGV 745

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A T TYN FID LCK G + EA+ L   +  L+ E+   +Y+ +I GLCK  +L+ A +
Sbjct: 746 EANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEV---SYTTVIIGLCKAEQLDRASK 802

Query: 182 LFQSLPRV-GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           L + +  V GL     T+N++I  F    ++D+A  L   M  +G +P+ +T+N ++   
Sbjct: 803 LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCL 862

Query: 241 IRNNETSKVVELLHRMDER 259
            + ++  K  EL   M  R
Sbjct: 863 CKLDKVDKAWELFDEMAVR 881



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   L+ M   G  P+   Y+ +IDG     +   AR++   M   G   + VTYNT
Sbjct: 589 VDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNT 648

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHS 119
           L+  +CK +  ++++ +   M+  G+ P  VTYNTL  GL + +++  A +L  EM ++ 
Sbjct: 649 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 708

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V +  +TYNT ID LCK G + +A  L   +     E     Y+  ID LCK G+L+ A
Sbjct: 709 CVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 768

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLML 238
             L   L  +  + + V+Y  +I G C   Q+D+A  L  +M A KG+     TFN L+ 
Sbjct: 769 SSL---LSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLID 825

Query: 239 GCIRNNETSKVVELLHRMDER 259
              +     + + LL  M +R
Sbjct: 826 AFTKTKRLDEALTLLGLMVQR 846



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 4/219 (1%)

Query: 42  LFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
            FV     G  H+  T N  +    +    +    ++  ML  G  P   TY+ +   L 
Sbjct: 112 FFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLC 171

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           +++Q++ A  + D+ +      E S Y       CK G + +A E+FR +          
Sbjct: 172 QMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAI 227

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           AY+ +I G C+    + A E  + +    + P+V TYNI+I G C   + DKA ++  +M
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM 287

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +GV P+ VTFN++M G  +  +  +   LL  M ERN
Sbjct: 288 VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 4/193 (2%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           + KD + ++  +     +G + +  T N     L E    +    +F+ M  +  A ++ 
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY+  I  LC+   I +A  +    +V   +  +  Y+ L    CK G+L+ A E+F+++
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
           P     P+ + YN +IHG C     D A +   +M  + VAP+  T+N L+ G  + ++T
Sbjct: 222 PS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKT 277

Query: 247 SKVVELLHRMDER 259
            K  E+LH M +R
Sbjct: 278 DKASEMLHEMVDR 290



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 4/159 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYN 59
           +DEAS LL  M       +   Y+T+I G C   ++DRA +L   M  + G      T+N
Sbjct: 765 LDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 821

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+ + KTK ++E+L L   M+ +G  P+V+TYN +   L ++ +V+ A +LFDEM   
Sbjct: 822 LLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 881

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
            + A + +Y   I GLC  G   EA ++   +    CE+
Sbjct: 882 GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEI 920


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  180 bits (456), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+PN   YSTLIDG+CL G++D A +L  SM   G   + VTYNTLI
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K+G+ + A +L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL+P+V TY++M       G +++  DLFL ME  G   N    N+++   ++
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L  +DE++
Sbjct: 737 RGDITRAGTYLFMIDEKH 754



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 145/250 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G+ PN +V+S LI  +   G++D+A  +F  M   G   + VTY T+I
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK+  VE+++  + +M+ + + P  + YN+L H L    + + A +L  EM    + 
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T  +N+ ID  CK G ++E+ +LF  +  +  +  I  YS LIDG C  GK++ A +L
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKL 536

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+  VG+ P+ VTYN +I+G+C   +M+ A  LF +ME+ GV+P+ +T+N ++ G  +
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596

Query: 243 NNETSKVVEL 252
              T+   EL
Sbjct: 597 TRRTAAAKEL 606



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 131/235 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L+  M+ RG+  +   ++++ID  C  G +  + +LF  M   G   N++TY+TL
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTL 520

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    ++E+  L + M+S G++P  VTYNTL +G  +I ++E AL LF EM+ S V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TYN  + GL +      A EL+  +     +L +  Y+ ++ GLCK    + A  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +FQ+L    L     T+NIMI      G+ D+A DLF  + A G+ P+  T++ +
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M+ RG+ PN   Y+++I   C    +D+A E+  SM  NG M N  TYN+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYC +   +E++    +M S G+ P VVTYN+L   L +  +   A K+FD M    
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  E +TY T + G    G +VE   L   +           +S LI    K GK++ A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  + + GL P+ VTY  +I   C  G+++ A   F  M  + ++P  + +N+L+   
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 241 IRNNETSKVVELLHRMDER 259
              ++  K  EL+  M +R
Sbjct: 455 CIFDKWDKAKELILEMLDR 473



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 136/262 (51%), Gaps = 7/262 (2%)

Query: 3   EASRLLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           EA  LL +M   G    P+   Y+T+I+GF   G++D+A   +  M   G + NVVTYN+
Sbjct: 180 EALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNS 239

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK + +++++ + + M+  G+ P   TYN++ HG     Q + A+    +M    
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLET 178
           V  +  TYN+ +D LCKNG   EA ++F ++  R LK E  I  Y  L+ G    G L  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE--ITTYGTLLQGYATKGALVE 357

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              L   + R G+ PN   ++I+I  +   G++D+A  +F  M  +G+ P+ VT+ T++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 239 GCIRNNETSKVVELLHRM-DER 259
              ++      +    +M DER
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDER 439



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R  + MI   + P   VY++LI   C+  + D+A+EL + M   G   + + +N+
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P ++TY+TL  G     +++ A KL   M    
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT I+G CK   + +A  LFR +        I  Y+ ++ GL +  +   A 
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +   G    + TYNI++HG C +   D+A  +F ++    +     TFN +M+G 
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN-IMIGA 663

Query: 241 I----RNNETSKVVELL 253
           +    RN+E   +   L
Sbjct: 664 LLKVGRNDEAKDLFAAL 680



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 38/287 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYN---------- 59
           +I++G R +A  ++ L+ G C       A ++ +  M   GC+ NV +YN          
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDEN 176

Query: 60  ---------------------------TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                                      T+ING+ K  D++++   Y EML +GI P VVT
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           YN++   L +   ++ A+++   M  + V     TYN+ + G C +G   EA    + + 
Sbjct: 237 YNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
               E  +  Y+ L+D LCK G+   A ++F S+ + GL P + TY  ++ G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + H L   M   G+ PN   F+ L+    +  +  + + +  +M ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 3/206 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL- 112
           N+ TY  LI   C    ++        ++ KG R   + +  L  GL    +   A+ + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGL 170
              M          +YN  + GLC      EA EL + +      C   + +Y+ +I+G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K G L+ A+  +  +   G++PNVVTYN +I   C    MDKA ++   M   GV PNC
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
            T+N+++ G   + +  + +  L +M
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKM 295



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS---DVAAETST 127
            E++ +++ E+L +G   ++   N     +   H    A+  ++ M  +   +V     T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 128 YNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEA--YSCLIDGLCKIGKLETAWEL-F 183
           Y   I   C  G +      F  L  V+K    ++A  ++ L+ GLC   +   A ++  
Sbjct: 94  YGILIGSCCCAGRLDLG---FAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFNTLMLGCI 241
           + + ++G +PNV +YNI++ G C++ +  +A +L   M   G    P+ V++ T++ G  
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  K     H M +R
Sbjct: 211 KEGDLDKAYGTYHEMLDR 228


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  180 bits (456), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 145/257 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L + +++ +  +   Y++L+DG+CL  EI++A+++F SM   G + NV +Y T+I
Sbjct: 298 EAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMI 357

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK K V+E++NL+ EM  + I P VVTYN+L  GL ++ ++   LKL DEM      
Sbjct: 358 NGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQP 417

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ +D LCKN ++ +A  L   L+       +  Y+ LI GLC+ GKLE A ++
Sbjct: 418 PNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKV 477

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L   G   +V TY +MI GFC  G  D A  L   ME  G  PN  T+  ++L    
Sbjct: 478 FEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFE 537

Query: 243 NNETSKVVELLHRMDER 259
            +E     +LL  M  R
Sbjct: 538 KDENDMAEKLLREMIAR 554



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 137/257 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    D ++ +G   +   Y TLI+G C  G I  A +L   +D      N V YN +I
Sbjct: 158 QALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 217

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K V ++ +LYS+M++K I P   T N+L +G   + Q++ A+ L  +M   ++ 
Sbjct: 218 DNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENIN 277

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  +D  CK G + EA  +          L +  Y+ L+DG C + ++  A ++
Sbjct: 278 PRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI 337

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+   G++ NV +Y  MI+G C    +D+A +LF +M  + + PN VT+N+L+ G  +
Sbjct: 338 FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGK 397

Query: 243 NNETSKVVELLHRMDER 259
             + S V++L+  M +R
Sbjct: 398 LGKISCVLKLVDEMHDR 414



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 126/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+ + + P+ F  ++LI GFC+ G++  A  L   M +      + T++ 
Sbjct: 226 VNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSI 285

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +CK   V+E+  +    + K I   VVTYN+L  G   + ++  A  +FD M    
Sbjct: 286 LVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRG 345

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   +Y T I+GLCK   + EA  LF  +R  K    +  Y+ LIDGL K+GK+    
Sbjct: 346 VIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVL 405

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G  PN++TYN ++   C +  +DKA  L  +++ +G+ P+  T+  L+ G
Sbjct: 406 KLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKG 464



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 114/226 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M  RGV  N   Y+T+I+G C    +D A  LF  M     + NVVTYN+
Sbjct: 331 INKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNS 390

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K   +   L L  EM  +G  P ++TYN++   L + H V+ A+ L   ++   
Sbjct: 391 LIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQG 450

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I GLC++G + +A ++F  L V    L +  Y+ +I G C  G  + A 
Sbjct: 451 IRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAAL 510

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   +   G +PN  TY I+I       + D A  L  +M A+G+
Sbjct: 511 ALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 125/247 (50%), Gaps = 4/247 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + F ++ LI+ F   G    +  +F  +   G   N +T+NTLI G C    + ++
Sbjct: 100 GIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQA 159

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           LN + +++++G     V+Y TL +GL ++ ++  AL+L   +    V      YN  ID 
Sbjct: 160 LNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDN 219

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLM 192
           +CK   + +A +L+   +++   +  + ++C  LI G C +G+L+ A  L   +    + 
Sbjct: 220 MCKAKLVNDAFDLYS--QMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENIN 277

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P + T++I++  FC +G++ +A  +      K +  + VT+N+LM G     E +K  ++
Sbjct: 278 PRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI 337

Query: 253 LHRMDER 259
              M  R
Sbjct: 338 FDSMASR 344



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 4/240 (1%)

Query: 2   DEASRLLD----LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           DE + L+     L+  +   P    ++ ++           A  L   M++NG + +  T
Sbjct: 48  DEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFT 107

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N LIN + +      S +++ ++L KG  P  +T+NTL  GL     +  AL   D++ 
Sbjct: 108 FNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVV 167

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                 +  +Y T I+GLCK G I  A +L + +     +     Y+ +ID +CK   + 
Sbjct: 168 AQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVN 227

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A++L+  +    + P+  T N +I+GFC  GQ+ +A  L   M  + + P   TF+ L+
Sbjct: 228 DAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILV 287



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 83/179 (46%), Gaps = 9/179 (5%)

Query: 85  GIRPTVVT-YNTLFHGLFEIHQVE--HALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGY 140
           G+ P+ ++ Y+ L H     HQ E  + +  F+ +  H +       +N  +  L K  +
Sbjct: 31  GLFPSSISLYSQLHH-----HQDEENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKH 85

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
              A  L + + +         ++ LI+   ++G    ++ +F  + + G  PN +T+N 
Sbjct: 86  HSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNT 145

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +I G C  G + +A +    + A+G   + V++ TL+ G  +    +  ++LL R+D +
Sbjct: 146 LIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGK 204


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  180 bits (456), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+PN   YSTLIDG+CL G++D A +L  SM   G   + VTYNTLI
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC+   ++++L L+ EM+S G+ P ++TYN +  GLF   +   A +L+  +  S   
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K+G+ + A +L
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL+P+V TY++M       G +++  DLFL ME  G   N    N+++   ++
Sbjct: 674 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 733

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L  +DE++
Sbjct: 734 RGDITRAGTYLSMIDEKH 751



 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 140/250 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G+ P+  V++ LI  +    ++D A  +F  M  +G   NVVTY  +I
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK+  V++++  + +M+ +G+ P ++ Y +L H L    + + A +L  EM    + 
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T  +N+ I   CK G ++E+ +LF  +  +  +  +  YS LIDG C  GK++ A +L
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+  VG+ P+ VTYN +I+G+C   +MD A  LF +M + GV+PN +T+N ++ G   
Sbjct: 534 LSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 593

Query: 243 NNETSKVVEL 252
              T+   EL
Sbjct: 594 TRRTAAAKEL 603



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 125/235 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L+  M+ RG+  N   ++++I   C  G +  + +LF  M   G   NV+TY+TL
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    ++E+  L S M S G++P  VTYNTL +G   + +++ AL LF EM  S V
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    TYN  + GL        A EL+  +     +L +  Y+ ++ GLCK    + A  
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +FQ+L    L     T+NIMI      G+ D+A DLF  + A G+ P+  T++ +
Sbjct: 638 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 692



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 129/258 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A      M+ R + P+   YS++I   C    +D+A E+  +M  NG M N +TYN++
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++GYC ++  +E++    +M S G+ P VVTYN+L   L +  +   A K+FD M    +
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             + +TY T + G    G +VE   L   +           ++ LI    K  K++ A  
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + + GL PNVVTY  +I   C  G +D A   F  M  +G+ PN + + +L+    
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452

Query: 242 RNNETSKVVELLHRMDER 259
             ++  K  EL+  M +R
Sbjct: 453 IFDKWDKAEELILEMLDR 470



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +   M Q G+ PN   Y  +I   C +G +D A   F  M   G   N++ Y +
Sbjct: 387 VDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C     +++  L  EML +GI    + +N++ H   +  +V  + KLFD M    
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY+T IDG C  G + EA +L  ++  +  +     Y+ LI+G C++ +++ A 
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ PN++TYNI++ G  +  +   A +L++ +   G      T+N ++ G 
Sbjct: 567 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626

Query: 241 IRNNETSKVVELLHRM 256
            +NN T + + +   +
Sbjct: 627 CKNNLTDEALRMFQNL 642



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  G+ PN  VY++LI   C+  + D+A EL + M   G   N + +N+
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P V+TY+TL  G     +++ A KL   M    
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT I+G C+   + +A  LF+ +        I  Y+ ++ GL    +   A 
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  + + G    + TYNI++HG C +   D+A  +F ++    +     TFN +M+G 
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN-IMIGA 660

Query: 241 I----RNNETSKVVELL 253
           +    RN+E   +   L
Sbjct: 661 LLKVGRNDEAKDLFAAL 677



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 139/326 (42%), Gaps = 70/326 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L  M++ GV PN   Y++++ G+C + +   A      M  +G   +VVTYN+
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------LFEIH---------- 104
           L++  CK     E+  ++  M  +G+ P + TY TL  G      L E+H          
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 105 -------------------QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                              +V+ A+ +F +M+   +     TY   I  LCK+G + +A 
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE------------------------ 181
             F  +        I  Y+ LI  LC   K + A E                        
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486

Query: 182 -----------LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
                      LF  + R+G+ PNV+TY+ +I G+C  G+MD+A  L   M + G+ P+C
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
           VT+NTL+ G  R +     + L   M
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEM 572



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 3/238 (1%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           EA  LL +M      G  P+   Y+T+I+GF   G+ D+A   +  M       +VVTY+
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYS 235

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++I   CK + +++++ + + M+  G+ P  +TYN++ HG     Q + A+    +M+  
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSD 295

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V  +  TYN+ +D LCKNG   EA ++F ++     E  I  Y  L+ G    G L   
Sbjct: 296 GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM 355

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             L   + R G+ P+   +NI+I  +    ++D+A  +F  M   G+ PN VT+  ++
Sbjct: 356 HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 3/255 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTYNTLIN 63
           +L  M +    P+ F  + L+ G C       A EL   M  +   G   +VV+Y T+IN
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+ K  D +++ + Y EML + I P VVTY+++   L +   ++ A+++   M  + V  
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ + G C +    EA    + +R    E  +  Y+ L+D LCK G+   A ++F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            S+ + GL P++ TY  ++ G+   G + + H L   M   G+ P+   FN L+    + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 244 NETSKVVELLHRMDE 258
            +  + + +  +M +
Sbjct: 385 EKVDEAMLVFSKMRQ 399



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 4/248 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P    Y  LI   C  G +D       ++   G     +T+  L+ G C  K   +++
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 76  NLY-SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHSDVAAETSTYNTF 131
           ++    M      P V +   L  GL + ++ + AL+L   M   +    A +  +Y T 
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+G  K G   +A   +  +   +    +  YS +I  LCK   ++ A E+  ++ + G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           MPN +TYN ++HG+C+  Q  +A      M + GV P+ VT+N+LM    +N  +++  +
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 252 LLHRMDER 259
           +   M +R
Sbjct: 323 IFDSMTKR 330


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  180 bits (456), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 147/261 (56%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +AS     M + G +PN  VY+ L+ G C +G++++A  LF  M  + C  +VVTYNT
Sbjct: 166 VKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNT 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK + VEE   L+  M + G  P V+T++TL HGL    ++E AL++F  M  + 
Sbjct: 226 LLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 285

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I GLC+   +++A ELF  +          AY+ LI G CK G ++ A 
Sbjct: 286 CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 345

Query: 181 ELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L++ +    GL P +VT+N +I GFC  G++ +A++L  +M  KG+A +  T+  L+ G
Sbjct: 346 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAG 405

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R  +  + +E+  +M E+ 
Sbjct: 406 LSRATKLDEALEVYKQMREKK 426



 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D AS L D MI+ G  P+  ++  LI G C  G++  A E F  M  +GC  NV  YN 
Sbjct: 131 VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C +  +E++  L++EM S    P VVTYNTL   + +  +VE   KLF+ M+ + 
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T++T I GLC+ G + +A E+F ++    C+     Y+ LI GLC+  K+  A 
Sbjct: 251 YVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAR 310

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME-AKGVAPNCVTFNTLMLG 239
           ELF+ + +  + P+ V YN +I G+C  G MD+A  L+ +M    G+ P  VTFNTL+ G
Sbjct: 311 ELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDG 370

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +  +  +  EL+  M  + 
Sbjct: 371 FCKLGKLGRANELVAEMGTKG 391



 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 143/257 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E+ ++L+ M+  G  P+ F ++ ++ GF  +  +++ARE++  M  +G   + V+Y+ L
Sbjct: 27  EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 86

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K   ++ESL + SEM+ +G  P++  Y++L   L +  +V+HA  LFDEM     
Sbjct: 87  IHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGH 146

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +   +   I GLC+ G + +A+E F+ +    C+  +  Y+ L+ GLC  G+LE A  
Sbjct: 147 HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANT 206

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +      P+VVTYN ++   C   ++++   LF  M A G  PN +TF+TL+ G  
Sbjct: 207 LFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLC 266

Query: 242 RNNETSKVVELLHRMDE 258
           R  E  K +E+   M E
Sbjct: 267 RTGELEKALEVFGSMLE 283



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 128/257 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE+ ++L  M+ RG  P+   YS+L+        +D A  LF  M   G   + + +  
Sbjct: 96  LDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYE 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+   V+++   + +M   G +P V  YN L HGL    Q+E A  LF EM+   
Sbjct: 156 LILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHS 215

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYNT +D +CK   + E  +LF  +R       +  +S LI GLC+ G+LE A 
Sbjct: 216 CSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 275

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F S+   G  PN  TY  +I G C   ++ +A +LF  M    + P+ V +N+L+ G 
Sbjct: 276 EVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 335

Query: 241 IRNNETSKVVELLHRMD 257
            +     +  +L   M 
Sbjct: 336 CKRGSMDEAEKLYREMS 352



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 125/227 (55%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  + +  N F YS++I       + + + ++   M   GC  +V  +N ++ G+ ++ +
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E++  +Y  M+  G +P  V+Y+ L HGL +I +++ +LK+  EM           Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +  L K   +  A+ LF  +           +  LI GLC+ GK++ A E F+ +P+ G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             PNV  YN+++HG C+ GQ+++A+ LF +M++   +P+ VT+NTL+
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 126/227 (55%), Gaps = 1/227 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +   M++ G +PN + Y+TLI G C   ++ +ARELF  M       + V YN+
Sbjct: 271 LEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 330

Query: 61  LINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI GYCK   ++E+  LY EM    G++PT+VT+NTL  G  ++ ++  A +L  EM   
Sbjct: 331 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 390

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +AA++ TY   I GL +   + EA E+++ +R  K  L   +    + GLCK G ++ A
Sbjct: 391 GLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 450

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           + +F++  + G +PN  T+ I+       G+++ A  L    +A+ +
Sbjct: 451 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 497



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 68/141 (48%)

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M+  ++AA   TY++ I  L K     E+ ++   +    C   + A++ ++ G  +   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +E A E++Q +   G  P+ V+Y+I+IHG    G++D++  +  +M  +G  P+   +++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+    +         L   M
Sbjct: 121 LVRALAKARRVDHASSLFDEM 141



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 33/65 (50%)

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV TY+ +I     + + ++++ +  +M A G  P+   FN +M G  R+N   K  E+ 
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 254 HRMDE 258
             M E
Sbjct: 69  QHMVE 73


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  180 bits (456), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 145/257 (56%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RL+D M + GVRPN   Y+TLI G CL G  D A +L   M   G   ++++Y+TL+ 
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLR 627

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCKT  ++ +  L+ EML KG+ P  VTY+T+  GLF   +   A +L+  M  S    
Sbjct: 628 GYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQW 687

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ++GLCK   + EA ++F++L        I  ++ +ID L K G+ + A +LF
Sbjct: 688 DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLF 747

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            S+P  GL+PNVVTY IM+     +G +D+  +LFL ME  G  P+ V  N ++   +  
Sbjct: 748 ASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGR 807

Query: 244 NETSKVVELLHRMDERN 260
            E  +    L ++DE N
Sbjct: 808 GEIMRAGAYLSKIDEMN 824



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 130/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L  MI +GV+ +   YST+IDG C    +DRA  +   M   G   +VVTYNT
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK + V+ +  +   M+ KG++P VVTYNT+  GL +   V+ A  +   M   D
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYN  I G    G   E       +     +  +  YS L+D LCK GK   A 
Sbjct: 335 VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  + R G+ PNV  Y I++HG+   G +    DL   M A G++PN   FN ++   
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454

Query: 241 IRNNETSKVVELLHRMDE 258
            +     + + +  RM +
Sbjct: 455 AKKAMIDEAMHIFSRMSQ 472



 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 138/250 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LLDLM+  G+ PN ++++ ++  +     ID A  +F  M  +G   +VVTY  LI+  C
Sbjct: 431 LLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALC 490

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   V++++  +++M++ G+ P  V +N+L +GL  + + E A +LF EM    V     
Sbjct: 491 KLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVV 550

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            +NT +  LC  G ++ A  L  ++  +     + +Y+ LI G C  G+ + A +L   +
Sbjct: 551 FFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVM 610

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             VGL P++++Y+ ++ G+C  G++D A+ LF +M  KGV P  VT++T++ G       
Sbjct: 611 VSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRF 670

Query: 247 SKVVELLHRM 256
           S+  EL   M
Sbjct: 671 SEAKELYLNM 680



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRG---VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           ++EA  LL  M + G     PN   Y+T+IDG C    +DRA  +   M   G   +VVT
Sbjct: 177 VEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVT 236

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y+T+I+G CK + V+ +  +   M+ KG++P VVTYNT+  GL +   V+ A  +   M 
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMI 296

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  +  TYNT IDGLCK   +  A  + + +     +  I+ Y+CLI G    G+ +
Sbjct: 297 DKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWK 356

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                 + +   GL P+VVTY++++   C +G+  +A  +F  M  KG+ PN   +  L+
Sbjct: 357 EVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILL 416

Query: 238 LGCIRNNETSKVVELLHRM 256
            G       + + +LL  M
Sbjct: 417 HGYAARGAIADLTDLLDLM 435



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 135/291 (46%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L  MI +GV+P+   Y+T+IDG C    +DRA  +   M   G   +VVTYNT
Sbjct: 250 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 309

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK + V+ +  +   M+ K ++P + TYN L HG     + +  ++  +EM    
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG 369

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG----------- 169
           +  +  TY+  +D LCKNG   EA ++F  +     +  +  Y  L+ G           
Sbjct: 370 LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLT 429

Query: 170 ---------------------LCKIGK---LETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                                LC   K   ++ A  +F  + + GL P+VVTY I+I   
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C  G++D A   F  M   GV PN V FN+L+ G    +   K  EL   M
Sbjct: 490 CKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 133/262 (50%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +   M Q G+ P+   Y  LID  C  G +D A   F  M  +G   N V +N+
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNS 519

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C     E++  L+ EM  +G+RP VV +NT+   L    QV  A +L D M+   
Sbjct: 520 LVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVG 579

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     +YNT I G C  G   EAA+L   +  +  +  + +Y  L+ G CK G+++ A+
Sbjct: 580 VRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + R G+ P  VTY+ ++ G  +  +  +A +L+L+M   G   +  T+N ++ G 
Sbjct: 640 CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699

Query: 241 IRNN---ETSKVVELLHRMDER 259
            + N   E  K+ + L   D R
Sbjct: 700 CKTNCVDEAFKIFQSLCSKDLR 721



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 130/254 (51%), Gaps = 4/254 (1%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYNTLINGYCKT 68
           L+++ G R N  V + L++G C    +D A ++ +  M   GCM NVV+ NTL+ G C  
Sbjct: 115 LILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNE 174

Query: 69  KDVEESLNLYSEMLSKG---IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           K VEE+L L   M   G     P VVTYNT+  GL +   V+ A  +   M    V  + 
Sbjct: 175 KRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDV 234

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY+T IDGLCK   +  A  + + +     +  +  Y+ +IDGLCK   ++ A  + Q 
Sbjct: 235 VTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQH 294

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G+ P+VVTYN +I G C    +D+A  +   M  K V P+  T+N L+ G +   E
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE 354

Query: 246 TSKVVELLHRMDER 259
             +VV  L  M  R
Sbjct: 355 WKEVVRRLEEMYAR 368



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 142/263 (53%), Gaps = 10/263 (3%)

Query: 1   MDEASRLLDLMIQR----GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING---CMH 53
           +DEA   +D++++R    G  PN    +TL+ G C    ++ A EL  +M  +G   C  
Sbjct: 141 VDEA---MDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTP 197

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           NVVTYNT+I+G CK + V+ +  +   M+ KG++  VVTY+T+  GL +   V+ A  + 
Sbjct: 198 NVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVL 257

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M    V  +  TYNT IDGLCK   +  A  + + +     +  +  Y+ +IDGLCK 
Sbjct: 258 QHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKA 317

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
             ++ A  + Q +    + P++ TYN +IHG+ + G+  +      +M A+G+ P+ VT+
Sbjct: 318 QAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTY 377

Query: 234 NTLMLGCIRNNETSKVVELLHRM 256
           + L+    +N + ++  ++ + M
Sbjct: 378 SLLLDYLCKNGKCTEARKIFYCM 400



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 124/249 (49%), Gaps = 4/249 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           VRP+   YS L   FC  G I+     F  +   G   N V  N L+NG C  K V+E++
Sbjct: 86  VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145

Query: 76  N-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH---SDVAAETSTYNTF 131
           + L   M   G  P VV+ NTL  GL    +VE AL+L   M      +      TYNT 
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDGLCK   +  A  + + +     +L +  YS +IDGLCK   ++ A  + Q +   G+
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            P+VVTYN +I G C    +D+A  +   M  KGV P+ VT+NT++ G  +     +   
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADG 325

Query: 252 LLHRMDERN 260
           +L  M +++
Sbjct: 326 VLQHMIDKD 334



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 115/237 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L  MI + V+P+   Y+ LI G+  TGE          M   G   +VVTY+ 
Sbjct: 320 VDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSL 379

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK     E+  ++  M+ KGI+P V  Y  L HG      +     L D M  + 
Sbjct: 380 LLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANG 439

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++     +N  +    K   I EA  +F  +        +  Y  LID LCK+G+++ A 
Sbjct: 440 ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV 499

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             F  +   G+ PN V +N +++G C   + +KA +LF +M  +GV PN V FNT+M
Sbjct: 500 LKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIM 556



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 121/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + MI  GV PN+ V+++L+ G C     ++A ELF  M   G   NVV +NT
Sbjct: 495 VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT 554

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   C    V  +  L   M   G+RP V++YNTL  G     + + A +L D M    
Sbjct: 555 IMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVG 614

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y+T + G CK G I  A  LFR +       G   YS ++ GL    +   A 
Sbjct: 615 LKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAK 674

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           EL+ ++ + G   ++ TYNI+++G C    +D+A  +F  + +K + PN +TF  ++
Sbjct: 675 ELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMI 731



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 35/251 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID------------------------ 37
           DEA++LLD+M+  G++P+   Y TL+ G+C TG ID                        
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTI 660

Query: 38  -----------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                       A+EL+++M  +G   ++ TYN ++NG CKT  V+E+  ++  + SK +
Sbjct: 661 LQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDL 720

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           RP ++T+  +   LF+  + + A+ LF  +    +     TY   +  + + G + E   
Sbjct: 721 RPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDN 780

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LF  +    C       + +I  L   G++  A      +  +       T +++I  F 
Sbjct: 781 LFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFS 840

Query: 207 NDGQMDKAHDL 217
            +   + A  L
Sbjct: 841 REEYKNHAKSL 851



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 10/234 (4%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTK---DVEESLNLYSEML---SKGIRPT 89
           ID A +LF  +  +    +V  +N L+N   + +     E +++L++ M    S  +RP 
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 90  VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE-LF 148
           + TY+ L      + ++EH    F  +  +         N  ++GLC    + EA + L 
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG---LMPNVVTYNIMIHGF 205
           R +    C   + + + L+ GLC   ++E A EL  ++   G     PNVVTYN +I G 
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C    +D+A  +   M  KGV  + VT++T++ G  +     +   +L  M ++
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK 263


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  180 bits (456), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/252 (38%), Positives = 139/252 (55%), Gaps = 2/252 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L+D M  RG  P    Y+TLI GFC  G +D A ++   M+  G   N VTY  LI G C
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207

Query: 67  KTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
              +VE ++ +  EM  +G    P VVTY  L HGL +    E  ++  DEM  S     
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPN 267

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
            +TY   I GLC+ G  +EAA L   +  + CEL +  Y+ LIDGLCK+G+L+ A E+  
Sbjct: 268 NATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQI 327

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +   G+ P+V TY  +I G C+ G +D+A  L  +M AKG+ PN VT+ TL+ G  + +
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387

Query: 245 ETSKVVELLHRM 256
            T   ++L++ M
Sbjct: 388 RTDHALQLVNEM 399



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 120/239 (50%), Gaps = 2/239 (0%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           YS  I+G C  G+I  A E+F  M+  G   +  TYN LING CK   +E  ++L  EM 
Sbjct: 94  YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQ 153

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           ++G  PTVVTY TL HG     +V+ A+ + DEM+H  +   T TY   I GLC  G + 
Sbjct: 154 ARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVE 213

Query: 143 EAAELFR--TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
            A  + +   LR  +C   +  Y+ LI GLC+ G  E   E    +   G  PN  TY  
Sbjct: 214 RAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTA 273

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +IHG C  G   +A  L  +M A G   + V +N+L+ G  +  E     E+   M E+
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEK 332



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V++Y+  ING CK   + E++ ++ EM  KG  P   TYN L +GL +  Q+E  + L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           DEMQ    +    TY T I G C  G +  A ++   +           Y+ LI GLC  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 174 GKLETAWELFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           G++E A  + + +   G    PNVVTY  +IHG C  G  +   +   +M   G  PN  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T+  L+ G  +     +   LL+ M
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEM 294



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 103/242 (42%), Gaps = 37/242 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           +D A  +LD M  RG+ PN   Y+ LI G C  GE++RA                     
Sbjct: 177 VDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTY 236

Query: 40  ----------------RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
                            E    M I+GC  N  TY  LI+G C+     E+  L +EM++
Sbjct: 237 TQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA 296

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G    VV YN+L  GL ++ +++ A ++   M    VA +  TY + I GLC  G + E
Sbjct: 297 IGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDE 356

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A  L + +R          Y+ LI+G  +  + + A +L   +   GLMP    Y I+  
Sbjct: 357 ALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFK 416

Query: 204 GF 205
             
Sbjct: 417 SL 418



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 2/192 (1%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           + + +  SL +Y   L       V++Y+   +GL +  Q+  A+++F EM+    A ++ 
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I+GLCK+  +     L   ++       +  Y+ LI G C  G+++ A ++   +
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFNTLMLGCIRNN 244
              G+ PN VTY  +I G C+ G++++A  +  +M+ +G    PN VT+  L+ G  +  
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 245 ETSKVVELLHRM 256
                +E L  M
Sbjct: 248 LFEMGMEFLDEM 259



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 56/101 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +  LM+++GV P+ F Y++LI G C  G +D A  L   M   G + N VTY T
Sbjct: 319 LDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTT 378

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
           LING+ +    + +L L +EM S G+ P    Y  LF  L+
Sbjct: 379 LINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLY 419



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 57/98 (58%)

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           +YS  I+GLCK G++  A E+F+ +   G  P+  TYNI+I+G C D Q++    L  +M
Sbjct: 93  SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +A+G +P  VT+ TL+ G          +++L  M+ R
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHR 190


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  179 bits (455), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 10/265 (3%)

Query: 3   EASRLLDL----MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           E +R L++    M + GV P    Y+T+I+G C + E+    ELF  +   G   +VVTY
Sbjct: 60  ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTY 119

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-- 116
           NTLI+  CK  D+EE+  L+  M S+G  P VVTY+ L +GL ++ +++ A +L  EM  
Sbjct: 120 NTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR 179

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGLCKIG 174
           +  DV     TYN+F+DGLCK     EA EL R+LR   L+       +S LIDGLCK G
Sbjct: 180 KSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 239

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           + + A      +   G +PNVVTYN +++G C   +M++AH +   M  KGV P+ +T++
Sbjct: 240 QTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 297

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
            L+    + +   + +ELLH M  R
Sbjct: 298 VLVDAFCKASRVDEALELLHGMASR 322



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 141/255 (55%), Gaps = 2/255 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA    D MI  G  PN   Y+ L++G C   +++RA  +  SM   G   +V+TY+ L
Sbjct: 242 DEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVL 299

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK   V+E+L L   M S+G  P VVT+N++  GL +  +   A ++  ++ +  +
Sbjct: 300 VDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML 359

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T+N  I G CK G   +A+ LF  +     +  +  +  LIDGLCK G++E A +
Sbjct: 360 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARD 419

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +  +G+ PNVVTYN+++HG C  G++++  +   +M + G  P  +T+ +L+    
Sbjct: 420 ILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALC 479

Query: 242 RNNETSKVVELLHRM 256
           R + T   ++L+ ++
Sbjct: 480 RASRTDDALQLVSKL 494



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  +++ M+ +GV P+   YS L+D FC    +D A EL   M   GC  NVVT+N+
Sbjct: 274 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+    E+  +  ++ ++ + P  VT+N L  G  +    E A  LF+EM   +
Sbjct: 334 IIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+   IDGLCK G +  A ++   +  L     +  Y+ L+ GLCK G++E   
Sbjct: 394 MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPC 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E  + +   G +P  +TY  +++  C   + D A  L   +++ G  P+ VT+N L+ G 
Sbjct: 454 EFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGL 513

Query: 241 IRNNETSKVVELLHRM 256
            ++ +T + + +L  M
Sbjct: 514 WKSGKTEQAITVLEEM 529



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 126/264 (47%), Gaps = 6/264 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC--MHNVVTY 58
           ++EA RL   M  RG  PN   YS LI+G C  G ID AREL   M    C  + N++TY
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           N+ ++G CK     E+  L   +    +R  P  VT++TL  GL +  Q + A    D+M
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDM 249

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                     TYN  ++GLCK   +  A  +  ++        +  YS L+D  CK  ++
Sbjct: 250 IAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 309

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A EL   +   G  PNVVT+N +I G C   +  +A  + L +  + + P+ VTFN L
Sbjct: 310 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNIL 369

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  +     +   L   M  +N
Sbjct: 370 IAGACKAGNFEQASALFEEMVAKN 393



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 111/202 (54%), Gaps = 5/202 (2%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLY-SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
            +V  YN ++   C+  +   +L ++  EM   G+ PT+VTYNT+ +GL + +++   ++
Sbjct: 43  RSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGME 102

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           LF+E+       +  TYNT ID LCK G + EA  L   +    C   +  YS LI+GLC
Sbjct: 103 LFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLC 162

Query: 172 KIGKLETAWELFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VA 227
           K+G+++ A EL Q + R    ++PN++TYN  + G C      +A +L   +      V+
Sbjct: 163 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 222

Query: 228 PNCVTFNTLMLGCIRNNETSKV 249
           P+ VTF+TL+ G  +  +T + 
Sbjct: 223 PDTVTFSTLIDGLCKCGQTDEA 244



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 1/150 (0%)

Query: 3   EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA+R +LDLM   GV PN   Y+ L+ G C +G I+   E    M  +GC+   +TY +L
Sbjct: 415 EAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSL 474

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +   C+    +++L L S++ S G  P  VTYN L  GL++  + E A+ + +EM     
Sbjct: 475 VYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH 534

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
             ++ T+     GL ++G +    EL R +
Sbjct: 535 QPDSFTFAACFGGLHRSGNLAGTMELLRVV 564



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 4/152 (2%)

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR-TLRVLKCELGIEAYSCLID 168
           LK F     S   A+   YN  +  LC+ G    A E+FR  +        I  Y+ +I+
Sbjct: 33  LKFFFVRSSSRSVAD---YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIIN 89

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLCK  +L    ELF+ L + G  P+VVTYN +I   C  G +++A  L   M ++G  P
Sbjct: 90  GLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVP 149

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           N VT++ L+ G  +     +  EL+  M  ++
Sbjct: 150 NVVTYSVLINGLCKVGRIDEARELIQEMTRKS 181



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 62/133 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E    L+ M+  G  P +  Y +L+   C     D A +L   +   G   + VTYN 
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K+   E+++ +  EM+ KG +P   T+   F GL     +   ++L   +    
Sbjct: 509 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKG 568

Query: 121 VAAETSTYNTFID 133
           +  + +T ++ +D
Sbjct: 569 MLPDATTCSSILD 581


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  179 bits (455), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 141/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + MI RG+ PN   Y++LI G C    +D A ++   M   GC  ++ TYN 
Sbjct: 351 LTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNI 410

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K V++ + L+ +M  +G+    VTY+TL  G  +  ++  A K+F EM    
Sbjct: 411 LINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQG 470

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   +DGLC NG + EA  +   +   K EL I  Y+ +I G+C   K++ AW
Sbjct: 471 VHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAW 530

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF SLP  G+  ++ +YNIM+ G C    + +A  LF  M+  G  P+  T+NTL+   
Sbjct: 531 SLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAH 590

Query: 241 IRNNETSKVVELLHRM 256
           +R N+ +  V+L+  M
Sbjct: 591 LRGNDITTSVQLIEEM 606



 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 143/257 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+ ++LL  MI R + PN   +S LID     G++  A++L+  M   G   N +TYN+L
Sbjct: 317 DDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSL 376

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C  K ++E+  +   M+SKG  P + TYN L +G  +  QV+  ++LF +M    +
Sbjct: 377 IYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGM 436

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A+T TY+T I G C++  ++ A ++F+ +       GI  Y+ L+DGLC  G+LE A  
Sbjct: 437 IADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALG 496

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   + +  +  ++  YNI+IHG CN  ++D A  LF  + +KGV  +  ++N ++ G  
Sbjct: 497 ILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLC 556

Query: 242 RNNETSKVVELLHRMDE 258
           + +  S+   L  +M E
Sbjct: 557 KRSSLSEADALFRKMKE 573



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 134/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M+     P+    +T+++G CL   +  A +L   M  NGC  N  TY  ++
Sbjct: 178 EAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPIL 237

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  CK+ +   +L+L  +M  + I+P VVTY  +   L +  +++ AL  F EM+   + 
Sbjct: 238 NRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIK 297

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN+ I   C  G   + A+L R +   K    +  +S LID L K GKL  A +L
Sbjct: 298 ANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDL 357

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +   G+ PN +TYN +I+G CND ++D+A+ +   M +KG  P+  T+N L+ G  +
Sbjct: 358 YNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCK 417

Query: 243 NNETSKVVELLHRMDER 259
             +    + L  +M  R
Sbjct: 418 AKQVDDGMRLFRKMSLR 434



 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 132/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M  R ++P+   Y+ +ID  C  G +D A   F  M+  G   NV TYN+LI  +C
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
                ++   L  +M+++ I P VVT++ L   L +  ++  A  L++EM    +   T 
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN+ I GLC +  + EA ++   +    C+  I  Y+ LI+G CK  +++    LF+ +
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G++ + VTY+ +I GFC   ++  A  +F +M ++GV P  +T+  L+ G   N E 
Sbjct: 432 SLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGEL 491

Query: 247 SKVVELLHRM 256
            + + +L +M
Sbjct: 492 EEALGILDQM 501



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 130/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA++++DLM+ +G  P+ + Y+ LI+GFC   ++D    LF  M + G + + VTY+T
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+++ +  +  ++ EM+S+G+ P ++TY  L  GL +  ++E AL + D+M    
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK 505

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I G+C    + +A  LF +L     +  I++Y+ ++ GLCK   L  A 
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ +   G  P+  TYN +I        +  +  L  +M+  G + +  T   +M
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVM 622



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 124/239 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+  M+  G +PN F Y  +++  C +G    A +L   M+      +VVTY  
Sbjct: 211 VSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTI 270

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK   ++++L+ +SEM +KGI+  V TYN+L        + +   +L  +M    
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T++  ID L K G + EA +L+  +     E     Y+ LI GLC   +L+ A 
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++   +   G  P++ TYNI+I+GFC   Q+D    LF  M  +G+  + VT++TL+ G
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 118/236 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   M++    P    ++ L      T + D    L   M++ G  +++ T N +
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +C+ + +  + +   ++   G  P  VT+NTL +GL    +V  A++L D M  S  
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T NT ++GLC    + EA +L   +    C+     Y  +++ +CK G   +A +
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L + +    + P+VVTY I+I   C DG++D A   F +ME KG+  N  T+N+L+
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLI 307



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 121/246 (49%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G+  + +  + +I+ FC   ++  A      +   G   N VT+NTL+NG C    V E
Sbjct: 119 KGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFE 178

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           ++ L   M+     P ++T NT+ +GL    +V  A+ L   M  +       TY   ++
Sbjct: 179 AVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILN 238

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            +CK+G    A +L R +   K +  +  Y+ +ID LCK G+L+ A   F  +   G+  
Sbjct: 239 RMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKA 298

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV TYN +I  FC+ G+ D    L  DM  + + PN VTF+ L+   ++  + ++  +L 
Sbjct: 299 NVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLY 358

Query: 254 HRMDER 259
           + M  R
Sbjct: 359 NEMITR 364



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           ++++ L+  ML     PTV+ +N LF  L    Q +  L L  +M+   +A +  T N  
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+  C+   +  A      +  L  E     ++ L++GLC  G++  A EL   +     
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +P+++T N +++G C   ++ +A DL   M A G  PN  T+  ++    ++  T+  ++
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 252 LLHRMDER 259
           LL +M+ R
Sbjct: 252 LLRKMEHR 259



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 70/135 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +LD M +  +  +  +Y+ +I G C   ++D A  LF S+   G   ++ +YN 
Sbjct: 491 LEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNI 550

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK   + E+  L+ +M   G  P   TYNTL       + +  +++L +EM+   
Sbjct: 551 MLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCG 610

Query: 121 VAAETSTYNTFIDGL 135
            +++ ST    +D L
Sbjct: 611 FSSDASTVKIVMDML 625


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 139/257 (54%), Gaps = 8/257 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA   L  MI+RG++PN + Y  LI G+C +GE+  A   F  M   G   N V    
Sbjct: 532 MEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTA 591

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK     E+ +++  ML + + P V TY+ L HGL    +++ A++L  E     
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           +  +  TYN+ I G CK G I +A +L   +    C+ GI      Y+ LI+GLCK G++
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYM----CQKGISPNIITYNALINGLCKAGEI 707

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A ELF  +P  GL  N VTY  +I G+C  G + KA  LF +M  KGV P+   ++ L
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767

Query: 237 MLGCIRNNETSKVVELL 253
           + GC +   T K + L 
Sbjct: 768 IDGCRKEGNTEKALSLF 784



 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/253 (36%), Positives = 138/253 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++ASR+ ++M+  GV+PNA +Y+TLI G    G    A  +   MD  G   +V+ YN+
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNS 521

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G CK++ +EE+ +   EM+ +G++P V TY  L HG  +  +++ A + F EM    
Sbjct: 522 VIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCG 581

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A         IDG CK G   EA  +FR +        +  YS LI GL + GKL+ A 
Sbjct: 582 IAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAM 641

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL       GL+P+V TYN +I GFC  G + KA  L   M  KG++PN +T+N L+ G 
Sbjct: 642 ELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGL 701

Query: 241 IRNNETSKVVELL 253
            +  E  +  EL 
Sbjct: 702 CKAGEIERARELF 714



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 142/254 (55%), Gaps = 1/254 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L + M Q+G+ PN   Y+ LI+G C  GEI+RARELF  +   G  HN VTY T+I
Sbjct: 674 KAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATII 733

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK+ ++ ++  L+ EM  KG+ P    Y+ L  G  +    E AL LF E      A
Sbjct: 734 DGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA 793

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           + TS+ N  +DG CK+G ++EA +L   +     +     Y+ LID  CK G L+ A + 
Sbjct: 794 S-TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + +  LMPN +TY  ++ G+   G+  +   LF +M AK + P+ VT++ ++   ++
Sbjct: 853 FVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912

Query: 243 NNETSKVVELLHRM 256
             +  K ++L+  M
Sbjct: 913 EGDHVKTLKLVDDM 926



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 130/253 (51%), Gaps = 1/253 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL   +++G+ P+ F Y+++I GFC  G I +A +L   M   G   N++TYN LIN
Sbjct: 640 AMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALIN 699

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK  ++E +  L+  +  KG+    VTY T+  G  +   +  A +LFDEM    V  
Sbjct: 700 GLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPP 759

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           ++  Y+  IDG  K G   +A  LF    V K      + + L+DG CK GK+  A +L 
Sbjct: 760 DSFVYSALIDGCRKEGNTEKALSLFLE-SVQKGFASTSSLNALMDGFCKSGKVIEANQLL 818

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    + P+ VTY I+I   C  G + +A   F+DM+ + + PN +T+  L+ G    
Sbjct: 819 EDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMA 878

Query: 244 NETSKVVELLHRM 256
              S++  L   M
Sbjct: 879 GRRSEMFALFDEM 891



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 127/243 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L+ M  +G++P    Y+ LIDGF   G+   A  +   M   G   N+ TYN L+
Sbjct: 324 EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALV 383

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CK  D+E++  L +EM+  GI+P   TYN +  G  +         L  EM+ S++ 
Sbjct: 384 KGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLV 443

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T    I+GLC++G I +A+ +F  +  L  +     Y+ LI G  + G+ + A  +
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + G+ P+V+ YN +I G C   +M++A D  ++M  +G+ PN  T+  L+ G  +
Sbjct: 504 LKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCK 563

Query: 243 NNE 245
           + E
Sbjct: 564 SGE 566



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 4/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L  LM ++G+  + F YS LIDGF        A+ +   M   G     V Y  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ +  D  E+  +  EML++G++  + TYN L  G+ +   +E A  L +EM    
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
           +  +T TYN  I+G  K        +L   ++  K  L   AY+C  +I+GLC+ G +E 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK--KSNLVPTAYTCGMIINGLCRHGSIED 464

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +F+ +  +G+ PN V Y  +I G   +G+  +A  +   M+ KGV P+ + +N++++
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  ++ +  +  + L  M ER
Sbjct: 525 GLCKSRKMEEAKDYLVEMIER 545



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 128/257 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  RLL  M ++G  P+   Y+ +I G C  GE+D A EL   MD  G + +V TY+ LI
Sbjct: 254 EGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILI 313

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K K   E+  +  EM SKG++P  V Y  L  G         A ++ +EM    V 
Sbjct: 314 DGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVK 373

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  + G+CK G + +A  L   + ++  +   + Y+ +I+G  K        +L
Sbjct: 374 LNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDL 433

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + +  L+P   T  ++I+G C  G ++ A  +F  M + GV PN V + TL+ G ++
Sbjct: 434 LSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQ 493

Query: 243 NNETSKVVELLHRMDER 259
                + V +L  MD++
Sbjct: 494 EGRFQEAVRILKVMDKK 510



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  LL+ MI  G++P+   Y+ +I+G+       R ++L   M  +  +    T   
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+   +E++  ++  M+S G++P  V Y TL  G  +  + + A+++   M    
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   YN+ I GLCK+  + EA +    +     +  +  Y  LI G CK G+++ A 
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +   G+ PN V    +I G+C +G   +A  +F  M  + V P+  T++ L+ G 
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631

Query: 241 IRNNETSKVVELLHRMDER 259
           +RN +    +ELL    E+
Sbjct: 632 LRNGKLQGAMELLSEFLEK 650



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 40/282 (14%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING----------------------- 50
           RGV     V+  LIDG+   G  D A   F+    NG                       
Sbjct: 165 RGV-----VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLEL 219

Query: 51  ------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
                        +H+V TY  LIN + +  + +E   L  EM  KG  P++VTYN +  
Sbjct: 220 FWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIG 279

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           GL    +V+ A +L   M    + A+  TY+  IDG  K     EA  +   +     + 
Sbjct: 280 GLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKP 339

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
           G  AY+ LIDG  + G    A+ + + +   G+  N+ TYN ++ G C  G M+KA  L 
Sbjct: 340 GHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALL 399

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +M   G+ P+  T+N ++ G ++   TS+V +LL  M + N
Sbjct: 400 NEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSN 441



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 101/219 (46%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA++LL+ M+ + V+P+   Y+ LID  C TG +  A + FV M     M N +TY  L+
Sbjct: 813  EANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            +GY       E   L+ EM++K I P  VT++ +     +       LKL D+M      
Sbjct: 873  SGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGN 932

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               +  +  ID LC+  ++ E  ++   +      L +   S L+    K GK++ A  +
Sbjct: 933  VSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARV 992

Query: 183  FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             +S+ R   +P+    N +I+   +    + A D    M
Sbjct: 993  LKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 36/259 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL D M  +GV P++FVYS LIDG    G  ++A  LF+   +     +  + N 
Sbjct: 742 LSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLE-SVQKGFASTSSLNA 800

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK+  V E+  L  +M+ K ++P  VTY  L                        
Sbjct: 801 LMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTIL------------------------ 836

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                      ID  CK G++ EA + F  ++          Y+ L+ G    G+    +
Sbjct: 837 -----------IDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMF 885

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +    + P+ VT+++MI     +G   K   L  DM  KG   +    + L+   
Sbjct: 886 ALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPL 945

Query: 241 IRNNETSKVVELLHRMDER 259
            R    S+V+++L +++E+
Sbjct: 946 CRKEHVSEVLKVLEKIEEQ 964


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 148/258 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   YSTLIDG+CL G++D A +L  SM   G   + VTY+TLI
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 446 NGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQ 505

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    +A  +F+ L ++  +L    ++ +ID L K+G+ + A +L
Sbjct: 506 LELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 565

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+PN  TY +M       G +++   LFL ME  G   +    N ++   ++
Sbjct: 566 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 625

Query: 243 NNETSKVVELLHRMDERN 260
             E ++    L  +DE++
Sbjct: 626 RGEITRAGTYLSMIDEKH 643



 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 143/250 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G+ PN +V+S L+  +    +++ A  +F  M   G   N VTY  +I
Sbjct: 246 EMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVI 305

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK+  VE+++  + +M+ +G+ P  + YN+L HGL   ++ E A +L  EM    + 
Sbjct: 306 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 365

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T  +N+ ID  CK G ++E+ +LF  +  +  +  I  YS LIDG C  GK++ A +L
Sbjct: 366 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 425

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+  VG+ P+ VTY+ +I+G+C   +M  A  LF +ME+ GV+P+ +T+N ++ G  +
Sbjct: 426 LASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQ 485

Query: 243 NNETSKVVEL 252
              T+   EL
Sbjct: 486 TRRTAAAKEL 495



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 140/260 (53%), Gaps = 3/260 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTYN 59
           ++A  + D +++RG+ P+ F Y+ L++G C       A EL   M  +G  C  +VV+Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+ING+ K  D++++ + Y+EML + I P VVTYN++   L +   V+ A+++   M  S
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V  +  TYN+ + G C +G   EA    + +R    E  +  Y+ L+D LCK G+   A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++F S+ + GL P + TY  ++ G+   G + + H L   M   G+ PN   F+ L+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 240 CIRNNETSKVVELLHRMDER 259
             +  +  + + +  +M ++
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQ 292



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 129/232 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L+  M+ RG+  N   ++++ID  C  G +  + +LF  M   G   +++TY+TL
Sbjct: 350 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 409

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    ++E+  L + M+S G++P  VTY+TL +G  +I +++ AL LF EM+ S V
Sbjct: 410 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGV 469

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TYN  + GL +      A EL+  +     +L +  Y+ ++ GLCK    + A  
Sbjct: 470 SPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALR 529

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           +FQ+L  + L     T+NIMI      G+ D+A DLF+   + G+ PN  T+
Sbjct: 530 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 581



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 131/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+     + M+ + + PN   Y+++I   C    +D+A E+  +M  +G M + +TYN+
Sbjct: 104 LDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 163

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G+C +   +E++    +M S G+ P VVTYN+L   L +  +   A K+FD M    
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 223

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  E +TY T + G    G +VE   L   +           +S L+    K  K+E A 
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 283

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  + + GL PN VTY  +I   C  G+++ A   F  M  +G++P  + +N+L+ G 
Sbjct: 284 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 343

Query: 241 IRNNETSKVVELLHRMDER 259
              N+  +  EL+  M +R
Sbjct: 344 CTCNKWERAEELILEMLDR 362



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 3/249 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    + MI  G+ P   VY++LI G C   + +RA EL + M   G   N + +N+
Sbjct: 314 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P ++TY+TL  G     +++ A KL   M    
Sbjct: 374 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 433

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T I+G CK   + +A  LFR +        I  Y+ ++ GL +  +   A 
Sbjct: 434 MKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 493

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL---M 237
           EL+  + + G    + TYNI++HG C +   D A  +F ++    +     TFN +   +
Sbjct: 494 ELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 553

Query: 238 LGCIRNNET 246
           L   RN+E 
Sbjct: 554 LKVGRNDEA 562



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/215 (20%), Positives = 77/215 (35%), Gaps = 70/215 (32%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFC----------------------------- 31
           MDEA++LL  M+  G++P+   YSTLI+G+C                             
Sbjct: 419 MDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNI 478

Query: 32  ------LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML--- 82
                  T     A+EL+V +  +G    + TYN +++G CK K  +++L ++  +    
Sbjct: 479 ILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 538

Query: 83  --------------------------------SKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
                                           S G+ P   TY  +   +     +E   
Sbjct: 539 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 598

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           +LF  M+ +    ++   N  +  L + G I  A 
Sbjct: 599 QLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 633



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 55/139 (39%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A R+   +    ++  A  ++ +ID     G  D A++LFV+   NG + N  TY  +
Sbjct: 525 DDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 584

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
                    +EE   L+  M   G        N +   L +  ++  A      +     
Sbjct: 585 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 644

Query: 122 AAETSTYNTFIDGLCKNGY 140
           + E ST + FID L    Y
Sbjct: 645 SLEASTASLFIDLLSGGKY 663


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 148/296 (50%), Gaps = 36/296 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R++D MIQRG +PN   Y TL+DGFC  G++D A EL   M   G   N +TYN 
Sbjct: 130 VDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 189

Query: 61  LINGYCKTKDVEESLNLYSEM------------------------------------LSK 84
           +++G C  + ++ +L L+ EM                                    +SK
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P VVTY++L HGL +  +++ A  L   M  S  +    TYNT IDG CK G I EA
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             L   +    C+  +  Y+ L+D  CK GK E A  L + +   G +PN+ TYN ++  
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           FC   ++++A  L   M  KG  PN V++NT++ G  +  +  + V LL +M   N
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425



 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 147/295 (49%), Gaps = 36/295 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RLL+ M+  G  PN F Y+T++ GFC    ++ A  L   M + GC  +VV+Y T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 61  LINGYCKTKDVEE-----------------------------------SLNLYSEMLSKG 85
           +ING CK   V+E                                   ++ L  +M  +G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETSTYNTFIDGLCKNGYIVEA 144
            RP  +TYN + HGL    +++ AL+LF EM+ S     +  TY+T +D L K+G + +A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             L   +    C   +  YS L+ GLCK GKL+ A  L Q + R G  PN+VTYN +I G
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            C  G++D+A+ L  +M   G  PN VT+  L+    +  +    + L+  M E+
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 36/292 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RL++ M+ +G  PN   YS+L+ G C  G++D A  L   M  +GC  N+VTYNT
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH------------GLFEI----- 103
           +I+G+CK   ++E+ +L  EM+  G +P VVTY  L              GL E+     
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 355

Query: 104 ------------------HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                              +VE A +L   M          +YNT I GLCK   + E  
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L   +    C   I  ++ +ID +CK  +++ A+ELF  +   G  PN+VTYN ++HG 
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 475

Query: 206 CNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C   + D+A  L  +M  K G +P+ +T+NT++ G  ++    +  +L  +M
Sbjct: 476 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527



 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 139/257 (54%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LL+ M+     P+   ++T+ID  C T  +D A ELF  +  +GC  N+VTYN+L+
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472

Query: 63  NGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +G CK++  +++  L  EM  K G  P ++TYNT+  GL +  +V+ A KLF +M    +
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A +  TY+  I  LCK  ++ EA  +   +     + G   Y  LIDG CK G L+ A E
Sbjct: 533 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 592

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           + Q L   G  P+VVT++I I      G++ +A +L   M   G+ P+ VT+NTL+ G  
Sbjct: 593 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652

Query: 242 RNNETSKVVELLHRMDE 258
             + T   V+L   M +
Sbjct: 653 DASRTEDAVDLFEVMRQ 669



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 136/247 (55%), Gaps = 2/247 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++G++ +A V+ +++ G C  G+   A   F  M    C  + VTYNT+ING  K+  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDR 59

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +++++ L  EM+  G  P V +YNT+ HG  + ++VE+AL L ++M       +  +Y T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+GLCK   + EA  +   +    C+  +  Y  L+DG C++G L+ A EL + +   G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTLMLGCIRNNETSKV 249
             PN +TYN ++HG C+  ++D A  LF +ME  G   P+  T++T++   +++ +    
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 250 VELLHRM 256
             L+  M
Sbjct: 240 CRLVEAM 246



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 130/238 (54%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD-INGCMHNVVTYN 59
           +D A  L +L+ + G  PN   Y++L+ G C +   D+A  L   M    GC  +++TYN
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 505

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+I+G CK+K V+ +  L+ +MLS G+ P  VTY+ +   L +   ++ A  + + M  +
Sbjct: 506 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 565

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TY T IDG CK G + +A E+ + L        +  +S  ID L K G+L  A
Sbjct: 566 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 625

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            EL +++ R GL+P+ VTYN ++ GFC+  + + A DLF  M   G  P+  T+ TL+
Sbjct: 626 GELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 1/213 (0%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           M+  G   +   + +++ G C      +++  + EM SK   P  VTYNT+ +GL +  +
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           ++ A++L +EM  +  A    +YNT + G CK   +  A  L   + +  C   + +Y+ 
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +I+GLCK+ +++ A  +   + + G  PNV+TY  ++ GFC  G +D A +L   M  +G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             PN +T+N +M G     +    ++L   M+E
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEE 212



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 1/152 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA+ +L+LM++ G  P A  Y TLIDGFC TG +D+A E+   +   G   +VVT++ 
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 611

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+   K   + ++  L   ML  G+ P  VTYNTL  G  +  + E A+ LF+ M+   
Sbjct: 612 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCG 671

Query: 121 VAAETSTYNTFIDGLC-KNGYIVEAAELFRTL 151
              + +TY T +  L  K  Y    AE+ +++
Sbjct: 672 CEPDNATYTTLVGHLVDKKSYKDLLAEVSKSM 703



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 1/179 (0%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M  KG++     + ++  GL +  Q   A+  F EM  +    ++ TYNT I+GL K+  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           + +A  L   +        + +Y+ ++ G CK  ++E A  L + +   G  P+VV+Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +I+G C   Q+D+A  +   M  +G  PN +T+ TL+ G  R  +    VEL+ +M ER
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 150/256 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +L +MI++GV  N   Y++L+DG+ L  + ++A  +F +M   G   +V +Y+ 
Sbjct: 290 MKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSI 349

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CKTK V+E++NL+ EM SK + P  VTYN+L  GL +  ++  A  L +EM +  
Sbjct: 350 MINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRG 409

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TY++ +D LCKN  + +A  L   ++    +  I  Y+ L+DGLCK G+L+ A 
Sbjct: 410 QPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQ 469

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            ++Q L   G   +V  YN+M++G C +G  D+A  L   ME  G  P+ VT+ TL+   
Sbjct: 470 AVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRAL 529

Query: 241 IRNNETSKVVELLHRM 256
             N++  K V+LL  M
Sbjct: 530 FENDKNDKAVKLLREM 545



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 145/257 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA    D +I +G   +   Y TLI+G C TGE   A ++   +D      NVV YNT+I
Sbjct: 152 EALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTII 211

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K V  + +L SEM+ K I P VVTY TL +G   + +++ A+ LF++M   ++ 
Sbjct: 212 DSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIK 271

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +DGLCK G + +A  +   +     +  I  Y+ L+DG   + +   A  +
Sbjct: 272 PDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFV 331

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++ R G+ P+V +Y+IMI+G C    +D+A +LF +M +K +APN VT+N+L+ G ++
Sbjct: 332 FNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLK 391

Query: 243 NNETSKVVELLHRMDER 259
               S   +L++ M  R
Sbjct: 392 YGRISDAWDLVNEMHNR 408



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 128/241 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            AS L   MI + + P+   Y+TLI G  + G +  A  LF  M +     +V T+N L+
Sbjct: 222 HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  +++++ N+ + M+ +G+   +VTYN+L  G F + Q   A  +F+ M    V 
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVT 341

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y+  I+GLCK   + EA  LF+ +           Y+ LIDGL K G++  AW+L
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G   +V+TY+ ++   C + Q+DKA  L   ++ +G+ PN  T+  L+ G  +
Sbjct: 402 VNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCK 461

Query: 243 N 243
           N
Sbjct: 462 N 462



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 130/246 (52%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           + ++P+ F ++ LI+ FC  G ++ A  +   +   G   + VT  TLI G C    V E
Sbjct: 93  KQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVRE 152

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ + ++++KG     V+Y TL +GL +  +   AL++  ++    V      YNT ID
Sbjct: 153 ALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIID 212

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK+  ++ A++L   + V +    +  Y+ LI G   +G+L+ A  LF  +    + P
Sbjct: 213 SLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKP 272

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +V T+NI++ G C +G+M KA ++   M  +GV  N VT+N+LM G     + +K   + 
Sbjct: 273 DVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVF 332

Query: 254 HRMDER 259
           + M  R
Sbjct: 333 NTMARR 338



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 79/159 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L++ M  RG   +   YS+L+D  C   ++D+A  L   +   G   N+ TY  
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   ++++  +Y ++L KG    V  YN + +GL +    + AL L  +M+ + 
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
              +  TY T +  L +N    +A +L R + V    +G
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVG 553



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 103 IHQVEHALKLFDEMQH-SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           I  V+ A+  F+ + H  +       +N  +  L K  +   A    + + + + +  + 
Sbjct: 41  IDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLF 100

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            ++ LI+  C +G L  A+ +   + ++G  P+ VT   +I G C +G++ +A     D+
Sbjct: 101 TFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDV 160

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
            AKG   + V++ TL+ G  +  ET   +++L ++D
Sbjct: 161 IAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKID 196


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/257 (36%), Positives = 143/257 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A    D M+  G +PN   Y+T+I GFC  G+   A  L   MD  G   ++V YNT+I
Sbjct: 172 RAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTII 231

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK + V E+L+++SE+  KG+RP V TY+ L HGL    Q E A  LF+EM   ++ 
Sbjct: 232 DGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIM 291

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +D LCK G + EA  + + +     E     Y+ L++G C   K+  A  +
Sbjct: 292 PDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMV 351

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G MPNVV+YNI+I+G+C   ++D+A +LF +M  +G+ PN   +NTL+ G  +
Sbjct: 352 FDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQ 411

Query: 243 NNETSKVVELLHRMDER 259
                +  EL   M  +
Sbjct: 412 AGRHCEARELFKDMQAQ 428



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 126/234 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M + G RP+  +Y+T+IDG C    +  A ++F  +   G   +V TY+ L++
Sbjct: 208 AVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMH 267

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C +   EE+  L++EM+S  I P VVT+N L   L +   +  A  +   M    V  
Sbjct: 268 GLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEP 327

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             +TYN+ ++G C    + EA  +F  +    C   + +Y+ LI+G CK  +++ A ELF
Sbjct: 328 NYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELF 387

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   GL+PN   YN +I G C  G+  +A +LF DM+A+G +P+ VT   L+
Sbjct: 388 DEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILL 441



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 117/210 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EAS L + M+   + P+   ++ L+D  C  G +  A+ +   M   G   N  TYN+L
Sbjct: 276 EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSL 335

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NGYC    V E+  ++  M++KG  P VV+YN L +G  +  +++ A +LFDEM    +
Sbjct: 336 MNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL 395

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T  YNT I GLC+ G   EA ELF+ ++   C   +   + L+D LCK+G L+ A  
Sbjct: 396 IPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALR 455

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
           LF+++    L PN+VTY+I+I      G++
Sbjct: 456 LFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 5/242 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           + R+  L I+R V    F ++ LI+ F     +D A  +   +   G   + VT+++LIN
Sbjct: 107 SKRIELLRIERDV----FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLIN 162

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C       ++  + EM++ G +P + TYNT+  G  +I +   A+ L  +M  +    
Sbjct: 163 GLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRP 222

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   YNT IDGLCK+  + EA ++F  ++       +  YS L+ GLC   + E A  LF
Sbjct: 223 DIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALF 282

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
             +  + +MP+VVT+NI++   C +G + +A  +   M  KGV PN  T+N+LM G C++
Sbjct: 283 NEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQ 342

Query: 243 NN 244
           N 
Sbjct: 343 NK 344



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 120/237 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   +  +GVRP+ F YS L+ G C + + + A  LF  M     M +VVT+N 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   + E+  +   M+ KG+ P   TYN+L +G    ++V  A  +FD M    
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YN  I+G CK   I EA ELF  +           Y+ LI GLC+ G+   A 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ELF+ +   G  P++VT  I++   C  G +D A  LF  M+   + PN VT++ L+
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 103/176 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  ++ +MI++GV PN   Y++L++G+CL  ++  AR +F +M   GCM NVV+YN 
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK + ++E+  L+ EM  +G+ P    YNTL  GL +  +   A +LF +MQ   
Sbjct: 370 LINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQG 429

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
            + +  T    +D LCK GY+  A  LFR ++    +  +  Y  LI  + K GK+
Sbjct: 430 CSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 97/202 (48%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           +V ++ L++   + K     L+L   +    I   V  +N L +    + +V+ A  +  
Sbjct: 84  IVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLG 143

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++       +  T+++ I+GLC       A E F  +     +  +  Y+ +I G CKIG
Sbjct: 144 KIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIG 203

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           K   A  L + + + G  P++V YN +I G C D  + +A D+F +++ KGV P+  T++
Sbjct: 204 KTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYS 263

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
            LM G   +++  +   L + M
Sbjct: 264 ILMHGLCNSDQKEEASALFNEM 285



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 80/153 (52%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           +E AL  F+ M H         ++  +  L +  +      L + + +L+ E  +  ++ 
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI+   ++ +++ A+ +   + ++G  P+ VT++ +I+G C + +  +A + F +M A G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             PN  T+NT++ G  +  +T+  V LL +MD+
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDK 217


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 148/257 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA    D +I  GV+P+   Y+ LIDG+CL G++D + +L   M   G   + VTY+ L+
Sbjct: 418 EAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALL 477

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V+++L LY EM SK ++P  +TYN + HGLF   +V  A + + ++  S + 
Sbjct: 478 NGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQ 537

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              +TYN  + GLC+N ++ EA  +F+ LR  + +L +  ++ +I GL K+G++  A  L
Sbjct: 538 LGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSL 597

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P+ + Y +MI     +G ++++ +LFL ME  G   N  T N ++   + 
Sbjct: 598 FSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLE 657

Query: 243 NNETSKVVELLHRMDER 259
             +  +    L ++DE+
Sbjct: 658 KGDVRRAGTYLTKIDEK 674



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 138/233 (59%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL LMIQ G+     V++ LI  +     +D+A   F+ M   G   NVVTY T+I+  C
Sbjct: 282 LLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILC 341

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   VE++++ +S+M+S+G+ P ++T+ +L HGL  I + +   KL  EM +  +     
Sbjct: 342 KAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAI 401

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
             NT +D LCK G ++EA + F  +  +  +  + +Y+ LIDG C  GK++ + +L   +
Sbjct: 402 FLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +GL P+ VTY+ +++G+C +G++D A  L+ +M +K V PN +T+N ++ G
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHG 514



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 131/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M Q+G  PN   Y+T+ID  C  G ++ A   F  M   G   +++T+ +
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTS 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C   + ++   L  EM+++GI P  +  NT+   L +  +V  A   FD++ H  
Sbjct: 371 LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +Y   IDG C +G + E+ +L   +  +        YS L++G CK G+++ A 
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDAL 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +    + PN +TYNI++HG  + G++  A + ++ +   G+     T+N ++ G 
Sbjct: 491 ALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGL 550

Query: 241 IRNNETSKVVELLHRMDER 259
             N+   + + +   +  +
Sbjct: 551 CENSFVDEALRMFQGLRSK 569



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 116/253 (45%), Gaps = 16/253 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLT----------------GEIDRARELFV 44
           +D+A  L   M+ +G  PN   Y+++IDG C                  G+++ A  L  
Sbjct: 155 VDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLK 214

Query: 45  SMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
            M   G   +VVTY+ LI+ YCK     E+ N++  M+ +G  P   TY TL HG     
Sbjct: 215 KMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKG 274

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
            +     L   M    +  E   +N  I    KN  + +A   F  +R       +  Y+
Sbjct: 275 ALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYT 334

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +ID LCK G++E A   F  +   GL P+++T+  +IHG C  G+  K   L  +M  +
Sbjct: 335 TVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINR 394

Query: 225 GVAPNCVTFNTLM 237
           G+ PN +  NT+M
Sbjct: 395 GIHPNAIFLNTIM 407



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RLL  M   G++P+   YS LID +C  G    AR +F SM   G   +  TY T
Sbjct: 206 LEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRT 265

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY     + +  +L + M+  GI      +N L     +   ++ A+  F EM+   
Sbjct: 266 LLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKG 325

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY T ID LCK G + +A   F  +        I  ++ LI GLC IG+ +   
Sbjct: 326 FSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVE 385

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ PN +  N ++   C +G++ +AHD F  +   GV P+ V++  L+ G 
Sbjct: 386 KLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGY 445

Query: 241 IRNNETSKVVELLHRM 256
             + +  + ++LL RM
Sbjct: 446 CLDGKMDESIKLLGRM 461



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 16/258 (6%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK-------- 69
           PN   Y+ +I+G    GE+D+A  LF  M   G   N+VTYN++I+G CK +        
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 70  --------DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
                    +EE++ L  +M   G++P VVTY+ L     +I +   A  +FD M     
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY T + G    G +V+  +L   +      L    ++ LI    K   L+ A  
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  + + G  PNVVTY  +I   C  G+++ A   F  M ++G++P+ +TF +L+ G  
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 242 RNNETSKVVELLHRMDER 259
              E  KV +L   M  R
Sbjct: 377 TIGEWKKVEKLSFEMINR 394



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 29/263 (11%)

Query: 4   ASRLLDLMIQRGVRP---NAFVYSTLIDGFCLTGEID----------RARELFVSMDING 50
           A  L + M Q GV     +A  +  LI  FC  G +D          RA    ++ D   
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL---------- 100
           C  NV++YN +ING  K  +V+++  L+ EML +G  P +VTYN++  GL          
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 101 ------FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
                 F+  Q+E A++L  +M    +  +  TY+  ID  CK G   EA  +F ++   
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                   Y  L+ G    G L    +L   + + G+      +NI+I  +  +  +DKA
Sbjct: 255 GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKA 314

Query: 215 HDLFLDMEAKGVAPNCVTFNTLM 237
              F++M  KG +PN VT+ T++
Sbjct: 315 MTAFIEMRQKGFSPNVVTYTTVI 337



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 36/203 (17%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLF----HG---LFEIHQVEHALKLFDEMQHSDV-- 121
           +E++LNL+ E+L +    +V  +N +     HG     + H    A+ LF+ M    V  
Sbjct: 30  LEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNK 89

Query: 122 -AAETSTYNTFIDGLCKNGYIVEA-AELFRTLRV---------LKCELGIEAYSCLIDGL 170
            A +  T+   I   C  G +  A  E  R  R            C   + +Y+ +I+GL
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC----------------NDGQMDKA 214
            K G+++ A+ LF  +   G  PN+VTYN +I G C                + GQ+++A
Sbjct: 150 FKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209

Query: 215 HDLFLDMEAKGVAPNCVTFNTLM 237
             L   M   G+ P+ VT++ L+
Sbjct: 210 VRLLKKMSGGGLQPDVVTYSLLI 232


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   YSTLIDG+CL G++D A +L  SM   G   + VTYNTLI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K+G+ + A +L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL+P+V TY++M       G +++  DLFL ME  G   N    N+++   ++
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L  +DE++
Sbjct: 737 RGDITRAGTYLFMIDEKH 754



 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 144/246 (58%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LLDLM++ G+ PN +V+S LI  +   G++D+A  +F  M   G   + VTY T+I   C
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K+  VE+++  + +M+ + + P  + YN+L H L    + + A +L  EM    +  +T 
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            +N+ ID  CK G ++E+ +LF  +  +  +  I  YS LIDG C  GK++ A +L  S+
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             VG+ P+ VTYN +I+G+C   +M+ A  LF +ME+ GV+P+ +T+N ++ G  +   T
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 247 SKVVEL 252
           +   EL
Sbjct: 601 AAAKEL 606



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 131/235 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L+  M+ RG+  +   ++++ID  C  G +  + +LF  M   G   +++TY+TL
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    ++E+  L + M+S G++P  VTYNTL +G  +I ++E AL LF EM+ S V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TYN  + GL +      A EL+  +     +L +  Y+ ++ GLCK    + A  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +FQ+L    L     T+NIMI      G+ D+A DLF  + A G+ P+  T++ +
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M+ RG+ PN   YS++I   C    +D+A E+  SM  NG M N  TYN+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYC +   +E++    +M S G+ P VVTYN+L   L +  +   A K+FD M    
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  E +TY T + G    G +VE   L   +           +S LI    K GK++ A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  + + GL P+ VTY  +I   C  G+++ A   F  M  + ++P  + +N+L+   
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 241 IRNNETSKVVELLHRMDER 259
              ++  K  EL+  M +R
Sbjct: 455 CIFDKWDKAKELILEMLDR 473



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 7/262 (2%)

Query: 3   EASRLLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           EA  LL +M   G    P+   Y+T+I+GF   G++D+A   +  M   G + NVVTY++
Sbjct: 180 EALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK + +++++ + + M+  G+ P   TYN++ HG     Q + A+    +M    
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLET 178
           V  +  TYN+ +D LCKNG   EA ++F ++  R LK E  I  Y  L+ G    G L  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE--ITTYGTLLQGYATKGALVE 357

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              L   + R G+ PN   ++I+I  +   G++D+A  +F  M  +G+ P+ VT+ T++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 239 GCIRNNETSKVVELLHRM-DER 259
              ++      +    +M DER
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDER 439



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R  + MI   + P   VY++LI   C+  + D+A+EL + M   G   + + +N+
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P ++TY+TL  G     +++ A KL   M    
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT I+G CK   + +A  LFR +        I  Y+ ++ GL +  +   A 
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +   G    + TYNI++HG C +   D+A  +F ++    +     TFN +M+G 
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN-IMIGA 663

Query: 241 I----RNNETSKVVELL 253
           +    RN+E   +   L
Sbjct: 664 LLKVGRNDEAKDLFAAL 680



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 38/287 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYN---------- 59
           +I++G R +A  ++ L+ G C       A ++ +  M   GC+ NV +YN          
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDEN 176

Query: 60  ---------------------------TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                                      T+ING+ K  D++++   Y EML +GI P VVT
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           Y+++   L +   ++ A+++   M  + V     TYN+ + G C +G   EA    + + 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
               E  +  Y+ L+D LCK G+   A ++F S+ + GL P + TY  ++ G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + H L   M   G+ PN   F+ L+    +  +  + + +  +M ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 3/206 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL- 112
           N+ TY  LI   C    ++        ++ KG R   + +  L  GL    +   A+ + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGL 170
              M          +YN  + GLC      EA EL + +      C   + +Y+ +I+G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K G L+ A+  +  +   G++PNVVTY+ +I   C    MDKA ++   M   GV PNC
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
            T+N+++ G   + +  + +  L +M
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKM 295



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS---DVAAETST 127
            E++ +++ E+L +G   ++   N     +   H    A+  ++ M  +   +V     T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 128 YNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEA--YSCLIDGLCKIGKLETAWEL-F 183
           Y   I   C  G +      F  L  V+K    ++A  ++ L+ GLC   +   A ++  
Sbjct: 94  YGILIGSCCCAGRLDLG---FAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFNTLMLGCI 241
           + + ++G +PNV +YNI++ G C++ +  +A +L   M   G    P+ V++ T++ G  
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  K     H M +R
Sbjct: 211 KEGDLDKAYGTYHEMLDR 228


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 149/259 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  +L +M++  V+P+   Y++L+DG+ L  E+  A+ +F SM  +G    V +Y  
Sbjct: 295 MKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTI 354

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CKTK V+E+++L+ EM  K + P  +T+N+L  GL +  ++ +   L D+M+   
Sbjct: 355 MIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TY++ ID LCKN ++ +A  LF+ +   + +  +  Y+ LIDGLCK G+L+ A 
Sbjct: 415 QLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQ 474

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+FQ L   G   ++ TY +MI GFC  G  D+A  L   ME  G  PN +TF+ ++   
Sbjct: 475 EVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICAL 534

Query: 241 IRNNETSKVVELLHRMDER 259
              +E  K  +LL  M  R
Sbjct: 535 FEKDENDKAEKLLREMIAR 553



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 133/238 (55%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y TLI+G C  GE   A +L  +++      +VV YN +I+  CK K V E+ NLYSEM 
Sbjct: 177 YGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMN 236

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           +K I P VVTY TL +G   +  +  A+ L +EM+  ++  +  T++  ID L K G + 
Sbjct: 237 AKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMK 296

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
            A  +   +     +  +  Y+ L+DG   + +++ A  +F S+ + G+ P V +Y IMI
Sbjct: 297 AAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMI 356

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G C    +D+A  LF +M+ K V PN +TFN+L+ G  ++   + V +L+ +M +R+
Sbjct: 357 DGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 116/236 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L + M+     P  F ++ ++           A  L   +D  G   ++VT N L
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +C    +  S ++ + +L +G  P V+T  TL  GL    +V+ ALK  D++   + 
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +Y T I+GLCK G    A +L R L     +  +  Y+ +ID LCK   +  A  
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L+  +    + PNVVTY  +I+GFC  G + +A  L  +M+ K + P+  TF+ L+
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILI 286



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 35/226 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + M  + V PN   +++LIDG C +G I    +L   M     + +V+TY++
Sbjct: 365 VDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSS 424

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   +++++ L+ +M+++ I+P + TY  L                        
Sbjct: 425 LIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTIL------------------------ 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                      IDGLCK G +  A E+F+ L +    L I  Y+ +I G CK G  + A 
Sbjct: 461 -----------IDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEAL 509

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   +   G +PN +T++I+I       + DKA  L  +M A+G+
Sbjct: 510 ALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 121/245 (49%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G+  +    + LI+ FC  G+I  +  +  ++   G   +V+T  TLI G C   +V++
Sbjct: 98  KGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKK 157

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L  + ++++   +   ++Y TL +GL +I + + A++L   ++   +  +   YN  ID
Sbjct: 158 ALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIID 217

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCKN  + EA  L+  +   +    +  Y+ LI G C +G L  A  L   +    + P
Sbjct: 218 SLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINP 277

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +V T++I+I     +G+M  A  +   M    V P+ VT+N+L+ G    NE      + 
Sbjct: 278 DVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVF 337

Query: 254 HRMDE 258
           + M +
Sbjct: 338 NSMAQ 342



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 70/152 (46%)

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A+ LF+ M        T  +N  +  L K      A  L + L        +   + LI+
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
             C +G++  ++ +  ++ + G  P+V+T   +I G C  G++ KA     D+ A     
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + +++ TL+ G  +  ET   ++L+  ++ER+
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERS 204



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 55/110 (50%)

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A  LF  + +++       ++ ++  L K+ +  TA  L + L   G+  ++VT NI+I
Sbjct: 52  DAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILI 111

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           + FC+ GQ+  +  +   +  +G  P+ +T  TL+ G     E  K ++ 
Sbjct: 112 NCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKF 161


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   YSTLIDG+CL G++D A +L  SM   G   + VTYNTLI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K+G+ + A +L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL+P+V TY++M       G +++  DLFL ME  G   N    N+++   ++
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L  +DE++
Sbjct: 737 RGDITRAGTYLFMIDEKH 754



 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 144/246 (58%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LLDLM++ G+ PN +V+S LI  +   G++D+A  +F  M   G   + VTY T+I   C
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K+  VE+++  + +M+ + + P  + YN+L H L    + + A +L  EM    +  +T 
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            +N+ ID  CK G ++E+ +LF  +  +  +  I  YS LIDG C  GK++ A +L  S+
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             VG+ P+ VTYN +I+G+C   +M+ A  LF +ME+ GV+P+ +T+N ++ G  +   T
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 247 SKVVEL 252
           +   EL
Sbjct: 601 AAAKEL 606



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 131/235 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L+  M+ RG+  +   ++++ID  C  G +  + +LF  M   G   +++TY+TL
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    ++E+  L + M+S G++P  VTYNTL +G  +I ++E AL LF EM+ S V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TYN  + GL +      A EL+  +     +L +  Y+ ++ GLCK    + A  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +FQ+L    L     T+NIMI      G+ D+A DLF  + A G+ P+  T++ +
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M+ RG+ PN   YS++I   C    +D+A E+  SM  NG M N  TYN+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYC +   +E++    +M S G+ P VVTYN+L   L +  +   A K+FD M    
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  E +TY T + G    G +VE   L   +           +S LI    K GK++ A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  + + GL P+ VTY  +I   C  G+++ A   F  M  + ++P  + +N+L+   
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 241 IRNNETSKVVELLHRMDER 259
              ++  K  EL+  M +R
Sbjct: 455 CIFDKWDKAKELILEMLDR 473



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 7/262 (2%)

Query: 3   EASRLLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           EA  LL +M   G    P+   Y+T+I+GF   G++D+A   +  M   G + NVVTY++
Sbjct: 180 EALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK + +++++ + + M+  G+ P   TYN++ HG     Q + A+    +M    
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLET 178
           V  +  TYN+ +D LCKNG   EA ++F ++  R LK E  I  Y  L+ G    G L  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE--ITTYGTLLQGYATKGALVE 357

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              L   + R G+ PN   ++I+I  +   G++D+A  +F  M  +G+ P+ VT+ T++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 239 GCIRNNETSKVVELLHRM-DER 259
              ++      +    +M DER
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDER 439



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R  + MI   + P   VY++LI   C+  + D+A+EL + M   G   + + +N+
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P ++TY+TL  G     +++ A KL   M    
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT I+G CK   + +A  LFR +        I  Y+ ++ GL +  +   A 
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +   G    + TYNI++HG C +   D+A  +F ++    +     TFN +M+G 
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN-IMIGA 663

Query: 241 I----RNNETSKVVELL 253
           +    RN+E   +   L
Sbjct: 664 LLKVGRNDEAKDLFAAL 680



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 38/287 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYN---------- 59
           +I++G R +A  ++ L+ G C       A ++ +  M   GC+ NV +YN          
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDEN 176

Query: 60  ---------------------------TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                                      T+ING+ K  D++++   Y EML +GI P VVT
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           Y+++   L +   ++ A+++   M  + V     TYN+ + G C +G   EA    + + 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
               E  +  Y+ L+D LCK G+   A ++F S+ + GL P + TY  ++ G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + H L   M   G+ PN   F+ L+    +  +  + + +  +M ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 3/206 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL- 112
           N+ TY  LI   C    ++        ++ KG R   + +  L  GL    +   A+ + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGL 170
              M          +YN  + GLC      EA EL + +      C   + +Y+ +I+G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K G L+ A+  +  +   G++PNVVTY+ +I   C    MDKA ++   M   GV PNC
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
            T+N+++ G   + +  + +  L +M
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKM 295



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS---DVAAETST 127
            E++ +++ E+L +G   ++   N     +   H    A+  ++ M  +   +V     T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 128 YNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEA--YSCLIDGLCKIGKLETAWEL-F 183
           Y   I   C  G +      F  L  V+K    ++A  ++ L+ GLC   +   A ++  
Sbjct: 94  YGILIGSCCCAGRLDLG---FAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFNTLMLGCI 241
           + + ++G +PNV +YNI++ G C++ +  +A +L   M   G    P+ V++ T++ G  
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  K     H M +R
Sbjct: 211 KEGDLDKAYGTYHEMLDR 228


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 147/256 (57%), Gaps = 2/256 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L+  +  R  +PN  +Y+T+ID  C    +  A  LF  M   G   NVV+YN +I 
Sbjct: 194 AIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIK 253

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK+K V+E+LNL+ EM  K + PT+VTY +L  GL +  ++ +  +L DEM    + A
Sbjct: 254 GFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPA 313

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ IDGLCKNG++  A  LF  ++  + +     ++ L+DGLCK G+L+ A E+F
Sbjct: 314 DVITYNSLIDGLCKNGHLDRAIALFNKMKDXRFDR--LTFTILLDGLCKGGRLKDAQEVF 371

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q L       +V  YN+MI+G+C  G +++A  +   ME  G  P+ VTF  ++      
Sbjct: 372 QDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEK 431

Query: 244 NETSKVVELLHRMDER 259
           +E  K  +LLH M  R
Sbjct: 432 DENDKAEKLLHEMIAR 447



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P    ++ ++D F        A  L   +++ G   +  T N 
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N +C    +    ++ +++L +G +P  +T+ TL  GL    QV  AL   D++    
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y T I+G+CK G    A +L R +     +  +E Y+ +ID LCK   +  A+
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G+  NVV+YNIMI GFC    +D+A +LF +M  K + P  VT+ +LM G 
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGL 290

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   S V EL+  M +R
Sbjct: 291 CKSGRISYVWELIDEMHDR 309



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 129/245 (52%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G++P+ F  + L++ FC  G+I+    +   +   G   + +T+ TLI G C    V +
Sbjct: 99  KGIQPDFFTLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNK 158

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ + ++L++GI+   V+Y TL +G+ +I     A+KL  ++           YNT ID
Sbjct: 159 ALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID 218

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK   + EA  LF  +        + +Y+ +I G CK   ++ A  LF+ + +  ++P
Sbjct: 219 ALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVP 278

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            +VTY  ++ G C  G++    +L  +M  +G+  + +T+N+L+ G  +N    + + L 
Sbjct: 279 TIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALF 338

Query: 254 HRMDE 258
           ++M +
Sbjct: 339 NKMKD 343



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 37/226 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M Q+ + P    Y +L+DG C +G I    EL   M   G   +V+TYN+
Sbjct: 261 VDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNS 320

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   ++ ++ L+++M  K  R   +T+  L  GL +  +++ A ++F ++   +
Sbjct: 321 LIDGLCKNGHLDRAIALFNKM--KDXRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKE 378

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   YN  I+G CK G + EA     T+R                      K+E   
Sbjct: 379 YDLDVYPYNVMINGYCKQGLLEEAL----TMR---------------------SKMEDN- 412

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
                    G +P+ VT+ I+I+      + DKA  L  +M A+G+
Sbjct: 413 ---------GCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARGL 449


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   YSTLIDG+CL G++D A +L  SM   G   + VTYNTLI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K+G+ + A +L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL+P+V TY++M       G +++  DLFL ME  G   N    N+++   ++
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L  +DE++
Sbjct: 737 RGDITRAGTYLFMIDEKH 754



 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 145/250 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G+ PN +V+S LI  +   G++D+A  +F  M   G   + VTY T+I
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK+  VE+++  + +M+ + + P  + YN+L H L    + + A +L  EM    + 
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T  +N+ ID  CK G ++E+ +LF  +  +  +  I  YS LIDG C  GK++ A +L
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+  VG+ P+ VTYN +I+G+C   +M+ A  LF +ME+ GV+P+ +T+N ++ G  +
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596

Query: 243 NNETSKVVEL 252
              T+   EL
Sbjct: 597 TRRTAAAKEL 606



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 131/235 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L+  M+ RG+  +   ++++ID  C  G +  + +LF  M   G   +++TY+TL
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    ++E+  L + M+S G++P  VTYNTL +G  +I ++E AL LF EM+ S V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TYN  + GL +      A EL+  +     +L +  Y+ ++ GLCK    + A  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +FQ+L    L     T+NIMI      G+ D+A DLF  + A G+ P+  T++ +
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M+ RG+ PN   YS++I   C    +D+A E+  SM  NG M N  TYN+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYC +   +E++    +M S G+ P VVTYN+L   L +  +   A K+FD M    
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  E +TY T + G    G +VE   L   +           +S LI    K GK++ A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  + + GL P+ VTY  +I   C  G+++ A   F  M  + ++P  + +N+L+   
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 241 IRNNETSKVVELLHRMDER 259
              ++  K  EL+  M +R
Sbjct: 455 CIFDKWDKAKELILEMLDR 473



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 7/262 (2%)

Query: 3   EASRLLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           EA  LL +M   G    P+   Y+T+I+GF   G++D+A   +  M   G + NVVTY++
Sbjct: 180 EALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK + +++++ + + M+  G+ P   TYN++ HG     Q + A+    +M    
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLET 178
           V  +  TYN+ +D LCKNG   EA ++F ++  R LK E  I  Y  L+ G    G L  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE--ITTYGTLLQGYATKGALVE 357

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              L   + R G+ PN   ++I+I  +   G++D+A  +F  M  +G+ P+ VT+ T++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 239 GCIRNNETSKVVELLHRM-DER 259
              ++      +    +M DER
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDER 439



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R  + MI   + P   VY++LI   C+  + D+A+EL + M   G   + + +N+
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P ++TY+TL  G     +++ A KL   M    
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT I+G CK   + +A  LFR +        I  Y+ ++ GL +  +   A 
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +   G    + TYNI++HG C +   D+A  +F ++    +     TFN +M+G 
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN-IMIGA 663

Query: 241 I----RNNETSKVVELL 253
           +    RN+E   +   L
Sbjct: 664 LLKVGRNDEAKDLFAAL 680



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 38/287 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYN---------- 59
           +I++G   +A  ++ ++ G C       A ++ +  M   GC+ NV +YN          
Sbjct: 117 VIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDN 176

Query: 60  ---------------------------TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                                      T+ING+ K  D++++   Y EML +GI P VVT
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           Y+++   L +   ++ A+++   M  + V     TYN+ + G C +G   EA    + + 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
               E  +  Y+ L+D LCK G+   A ++F S+ + GL P + TY  ++ G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + H L   M   G+ PN   F+ L+    +  +  + + +  +M ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 38/244 (15%)

Query: 54  NVVTYNTL-----------------------------------INGYCKTKDVEESLNLY 78
           N+ TY  L                                   + G C  K   +++++ 
Sbjct: 90  NLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIV 149

Query: 79  -SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH--SDVAAETSTYNTFIDGL 135
              M   G  P V +YN L  GL + ++ + AL+L   M     D   +  +Y T I+G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            K G + +A   +  +        +  YS +I  LCK   ++ A E+  S+ + G+MPN 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
            TYN ++HG+C+ GQ  +A      M + GV P+ VT+N+LM    +N   ++  ++   
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 256 MDER 259
           M +R
Sbjct: 330 MTKR 333



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 39/211 (18%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS---DVAAETST 127
            E++ +++ E+L +G   ++   N     +   H    A+  ++ M  +   +V     T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 128 YNTFIDGLC----------------KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           Y   +   C                K G+IV+A                 A++ ++ GLC
Sbjct: 94  YGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAI----------------AFTPMLKGLC 137

Query: 172 KIGKLETAWEL-FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAP 228
              +   A ++  + + ++G +PNV +YNI++ G C+D +  +A +L   M   G    P
Sbjct: 138 ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPP 197

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + V++ T++ G  +  +  K     H M +R
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDR 228


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 151/258 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   YSTLIDG+CL G++D A +L  SM   G   + VTYNTLI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    EA  +F+ L +   +L    ++ +I  L K+G+ + A +L
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +L   GL+P+V TY++M       G +++  DLFL ME  G   N    N+++   ++
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 736

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L  +DE++
Sbjct: 737 RGDITRAGTYLFMIDEKH 754



 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 145/250 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LLDLM++ G+ PN +V+S LI  +   G++D+A  +F  M   G   + VTY T+I
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK+  VE+++  + +M+ + + P  + YN+L H L    + + A +L  EM    + 
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T  +N+ ID  CK G ++E+ +LF  +  +  +  I  YS LIDG C  GK++ A +L
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+  VG+ P+ VTYN +I+G+C   +M+ A  LF +ME+ GV+P+ +T+N ++ G  +
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596

Query: 243 NNETSKVVEL 252
              T+   EL
Sbjct: 597 TRRTAAAKEL 606



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 131/235 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L+  M+ RG+  +   ++++ID  C  G +  + +LF  M   G   +++TY+TL
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    ++E+  L + M+S G++P  VTYNTL +G  +I ++E AL LF EM+ S V
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TYN  + GL +      A EL+  +     +L +  Y+ ++ GLCK    + A  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +FQ+L    L     T+NIMI      G+ D+A DLF  + A G+ P+  T++ +
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M+ RG+ PN   YS++I   C    +D+A E+  SM  NG M N  TYN+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYC +   +E++    +M S G+ P VVTYN+L   L +  +   A K+FD M    
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  E +TY T + G    G +VE   L   +           +S LI    K GK++ A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  + + GL P+ VTY  +I   C  G+++ A   F  M  + ++P  + +N+L+   
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 241 IRNNETSKVVELLHRMDER 259
              ++  K  EL+  M +R
Sbjct: 455 CIFDKWDKAKELILEMLDR 473



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 7/262 (2%)

Query: 3   EASRLLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           EA  LL +M   G    P+   Y+T+I+GF   G++D+A   +  M   G + NVVTY++
Sbjct: 180 EALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK + +++++ + + M+  G+ P   TYN++ HG     Q + A+    +M    
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLET 178
           V  +  TYN+ +D LCKNG   EA ++F ++  R LK E  I  Y  L+ G    G L  
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE--ITTYGTLLQGYATKGALVE 357

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              L   + R G+ PN   ++I+I  +   G++D+A  +F  M  +G+ P+ VT+ T++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 239 GCIRNNETSKVVELLHRM-DER 259
              ++      +    +M DER
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDER 439



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R  + MI   + P   VY++LI   C+  + D+A+EL + M   G   + + +N+
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNS 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P ++TY+TL  G     +++ A KL   M    
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT I+G CK   + +A  LFR +        I  Y+ ++ GL +  +   A 
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +   G    + TYNI++HG C +   D+A  +F ++    +     TFN +M+G 
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN-IMIGA 663

Query: 241 I----RNNETSKVVELL 253
           +    RN+E   +   L
Sbjct: 664 LLKVGRNDEAKDLFAAL 680



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 38/287 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYN---------- 59
           +I++G R +A  ++ L+ G C       A ++ +  M   GC+ NV +YN          
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDEN 176

Query: 60  ---------------------------TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                                      T+ING+ K  D++++   Y EML +GI P VVT
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           Y+++   L +   ++ A+++   M  + V     TYN+ + G C +G   EA    + + 
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
               E  +  Y+ L+D LCK G+   A ++F S+ + GL P + TY  ++ G+   G + 
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + H L   M   G+ PN   F+ L+    +  +  + + +  +M ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 3/206 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL- 112
           N+ TY  LI   C    ++        ++ KG R   + +  L  GL    +   A+ + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGL 170
              M          +YN  + GLC      EA EL + +      C   + +Y+ +I+G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K G L+ A+  +  +   G++PNVVTY+ +I   C    MDKA ++   M   GV PNC
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
            T+N+++ G   + +  + +  L +M
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKM 295



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 13/198 (6%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS---DVAAETST 127
            E++ +++ E+L +G   ++   N     +   H    A+  ++ M  +   +V     T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 128 YNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEA--YSCLIDGLCKIGKLETAWEL-F 183
           Y   I   C  G +      F  L  V+K    ++A  ++ L+ GLC   +   A ++  
Sbjct: 94  YGILIGSCCCAGRLDLG---FAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFNTLMLGCI 241
           + + ++G +PNV +YNI++ G C++ +  +A +L   M   G    P+ V++ T++ G  
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  K     H M +R
Sbjct: 211 KEGDLDKAYGTYHEMLDR 228


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 148/284 (52%), Gaps = 35/284 (12%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++RG +P+  +++TLIDG C  G+ + A  L   M + GC+ +VVT N+L+ GYC    +
Sbjct: 102 LKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKI 161

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           ++   ++  M+SKG++P V +Y+   +G  ++ +++ A++LFDEM H  V     TYNT 
Sbjct: 162 DKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTL 221

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV-- 189
           I  LC+     +A  LFR +        I AYS L+DG CK G L+    LFQ + R   
Sbjct: 222 IKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLV 281

Query: 190 ---------------------------------GLMPNVVTYNIMIHGFCNDGQMDKAHD 216
                                            GL P+V TY  ++ G C +G + +A  
Sbjct: 282 KPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALR 341

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           LF  ME  G  P   ++N L+ GC+++N+TS VV+L+H M +R 
Sbjct: 342 LFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRG 385



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 126/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+ R  +P    ++ L+       + +    LF  M+  G  +NV T + 
Sbjct: 21  LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    V+   +++ + L +G +P VV + TL  G+  I + E A  L  EM    
Sbjct: 81  LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T N+ + G C  G I +  ++F  +     +  + +YS  I+G CK+ K++ A 
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAM 200

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +   G++PN VTYN +I   C   +   A  LF  M A G++P+ + ++TL+ G 
Sbjct: 201 ELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGF 260

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +++ L   M  R
Sbjct: 261 CKQGNLDEMLVLFQEMQRR 279



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 107/204 (52%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           G +D A   F  M        ++ +N L++   + K  E  ++L+ EM  +GI+  V T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           + L +    +H V++   +F +        +   + T IDG+C+ G    AA L + + +
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           + C   +   + L+ G C  GK++   ++F  +   GL P+V +Y+I I+G+C   ++D+
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLM 237
           A +LF +M  +GV PN VT+NTL+
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLI 222


>gi|296087908|emb|CBI35191.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/210 (41%), Positives = 131/210 (62%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           GC  NV +YNTLINGYCK + +++++ L+ EM  + + P  VTYNTL HGL  + +++ A
Sbjct: 5   GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 64

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + LF EM       +  TY   +D LCKN ++ +A  L + +     +  I+ Y+ +IDG
Sbjct: 65  IALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDG 124

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           +C+ G+LE A +LF +L   GL PNV TYNIM HG C  G +D+A  LF++M+    + +
Sbjct: 125 MCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSAD 184

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             T+NT+  G +RNNETS+ ++LL  M  R
Sbjct: 185 GCTYNTITQGFLRNNETSRAIQLLEEMLAR 214



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 130/241 (53%), Gaps = 1/241 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +G  PN F Y+TLI+G+C    +D+A  LF  M     + N VTYNTLI+G C    
Sbjct: 1   MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +++++ L+ EM++ G  P +VTY  L   L +   ++ A+ L   ++ S++  +   Y  
Sbjct: 61  LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG+C+ G + +A +LF  L     +  +  Y+ +  GLCK G L+ A +LF  +    
Sbjct: 121 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
              +  TYN +  GF  + +  +A  L  +M A+G + + V+  TL++G + ++   + V
Sbjct: 181 CSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCD-VSTTTLLVGMLSDDGLDQSV 239

Query: 251 E 251
           +
Sbjct: 240 K 240



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 96/178 (53%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M+ KG  P V +YNTL +G  +I +++ A+ LF+EM    +   T TYNT I GLC  G 
Sbjct: 1   MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 60

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           + +A  LFR +        +  Y  L+D LCK   L+ A  L +++    L P++  Y I
Sbjct: 61  LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 120

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +I G C  G+++ A DLF ++ +KG+ PN  T+N +  G  +     +  +L   MDE
Sbjct: 121 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDE 178



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 61/105 (58%)

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C   + +Y+ LI+G CKI +++ A  LF+ + R  L+PN VTYN +IHG C+ G++  A 
Sbjct: 6   CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAI 65

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            LF +M A G  P+ VT+  L+    +N    K + LL  ++  N
Sbjct: 66  ALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 110


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 130/226 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M+Q  + PN   Y++LI+G C+ G +  A++ F  M   GC  NVVTYNT
Sbjct: 257 LDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNT 316

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK++ VE+ + L+  M  +G+     TYNTL HG  ++ ++  A  +F  M    
Sbjct: 317 LINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG 376

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+   + GLC NG I  A   F  +R  +  LGI AY+ +I GLCK  K+E AW
Sbjct: 377 VTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAW 436

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           ELF  LP  G+ P+  TY IMI G C +G   +A +LF  M+  G+
Sbjct: 437 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 143/256 (55%), Gaps = 4/256 (1%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA  L   MI+R V PN   Y++LI+GFC+ G +  A+ +F  M   GC  +VVTYNTLI
Sbjct: 808  EAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLI 867

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             G+CK+K VE+ + L+ EM  +G+     TYNTL HG  +  ++  A K+F+ M    V 
Sbjct: 868  TGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVP 927

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             +  TYN  +D LC NG I +A  +   L+  + ++ I  Y+ +I G+C+  K++ AW L
Sbjct: 928  PDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCL 987

Query: 183  FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            F+SL R G+  + + Y  MI G C +G   +A  L   M+  G  P+   ++  +    R
Sbjct: 988  FRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL----R 1043

Query: 243  NNETSKVVELLHRMDE 258
            ++ TS   EL+  + E
Sbjct: 1044 DHYTSLSAELIKAVHE 1059



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 136/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+R+L  M +R + P+ F ++ LID F   G +D A+EL+  M  +    N VTYN+LI
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLI 283

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C    +  +   +  M SKG  P VVTYNTL +G  +  +VE  +KLF  M    + 
Sbjct: 284 NGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLV 343

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TYNT I G C+ G +  A ++F  +        I  +  L+ GLC  G++ +A   
Sbjct: 344 GDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVK 403

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +        +V YNIMIHG C   ++++A +LF  +  +GV P+  T+  ++LG  +
Sbjct: 404 FNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCK 463

Query: 243 NNETSKVVELLHRMDE 258
           N    +  EL  RM E
Sbjct: 464 NGPRREADELFRRMKE 479



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 134/244 (54%), Gaps = 1/244 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTL 61
           +A  L+  M++ G  PN  VY+TLID  C  G+++ A EL   M+  G +  ++VTYNTL
Sbjct: 153 DAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTL 212

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G C + +  ++  +  +M  + I P V T+  L     +   ++ A +L+ +M  S +
Sbjct: 213 LTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSI 272

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T TYN+ I+GLC +G +  A + F  +    C   +  Y+ LI+G CK  ++E   +
Sbjct: 273 GPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMK 332

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LFQ + R GL+ +  TYN +IHG+C  G++  A D+F  M + GV P+ +T   L+ G  
Sbjct: 333 LFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLC 392

Query: 242 RNNE 245
            N E
Sbjct: 393 VNGE 396



 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 131/243 (53%), Gaps = 1/243 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA  L+D M + G+ PN  +Y+T+I+G C   +++ A E+F  M+  G + + VTYNTL
Sbjct: 702 QEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTL 761

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C +    ++  L  +M+ + I P V+ +  L     +   +  A  L+ EM    V
Sbjct: 762 ISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSV 821

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN+ I+G C  G + +A  +F  +    C   +  Y+ LI G CK  ++E   +
Sbjct: 822 HPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 881

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +   GL+ +  TYN +IHG+C  G+++ A  +F  M   GV P+ VT+N ++L C+
Sbjct: 882 LFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYN-ILLDCL 940

Query: 242 RNN 244
            NN
Sbjct: 941 CNN 943



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 131/242 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + ++ LI  FC       A  L   M   G   ++VT  +L+NG+C+    +E+
Sbjct: 645 GISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEA 704

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L   M   G+ P VV YNT+ +GL +   + +AL++F  M+   + A+  TYNT I G
Sbjct: 705 VSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISG 764

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC +G   +AA L R +   K +  +  ++ LID   K G L  A  L++ + R  + PN
Sbjct: 765 LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPN 824

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           ++TYN +I+GFC  G++  A  +F  M +KG  P+ VT+NTL+ G  ++      ++L  
Sbjct: 825 ILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 884

Query: 255 RM 256
            M
Sbjct: 885 EM 886



 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 127/253 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M++ G +P+     +L++GFC       A  L  SM   G   NVV YNT+IN
Sbjct: 669 ALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVIN 728

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK +D+  +L ++  M  KGI    VTYNTL  GL    +   A +L  +M    +  
Sbjct: 729 GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDP 788

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               +   ID   K G ++EA  L++ +        I  Y+ LI+G C  G+L  A  +F
Sbjct: 789 NVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF 848

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G  P+VVTYN +I GFC   +++    LF +M  +G+  +  T+NTL+ G  + 
Sbjct: 849 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQA 908

Query: 244 NETSKVVELLHRM 256
            + +   ++ +RM
Sbjct: 909 GKLNVAQKVFNRM 921



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 1/243 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + ++ LI  FC    +  A  +   M   G   ++VT+ +L++G+C    + ++
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFID 133
            +L + M+  G  P VV YNTL   L +   V  AL+L +EM+    +AA+  TYNT + 
Sbjct: 155 FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLC +G   +AA + R +   +    +  ++ LID   K G L+ A EL++ + +  + P
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP 274

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           N VTYN +I+G C  G++  A   F  M +KG  PN VT+NTL+ G  ++      ++L 
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334

Query: 254 HRM 256
            RM
Sbjct: 335 QRM 337



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 109/199 (54%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + +A  + DLM+ +G  P+   Y+TLI GFC +  ++   +LF  M   G + +  TYNT
Sbjct: 841  LGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNT 900

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LI+GYC+   +  +  +++ M+  G+ P +VTYN L   L    ++E AL + +++Q + 
Sbjct: 901  LIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQ 960

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  +  TYN  I G+C+N  + EA  LFR+L     +L   AY  +I GLC+ G    A 
Sbjct: 961  MDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREAD 1020

Query: 181  ELFQSLPRVGLMPNVVTYN 199
            +L   +   G MP+   Y+
Sbjct: 1021 KLCTRMKEDGFMPSERIYD 1039



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 103/189 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +  DLM  +G  PN   Y+TLI+GFC +  ++   +LF  M   G + +  TYNTLI+
Sbjct: 295 AKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIH 354

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+   +  + +++S M+S G+ P ++T+  L HGL    ++  A+  F++M+  +   
Sbjct: 355 GYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYL 414

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YN  I GLCK   + EA ELF  L V   +     Y+ +I GLCK G    A ELF
Sbjct: 415 GIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELF 474

Query: 184 QSLPRVGLM 192
           + +   G++
Sbjct: 475 RRMKEDGII 483



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 95/189 (50%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +++  L+ EML     P++V +  +   + ++++ +  + LF +M++  ++ +  ++   
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I   C+      A  L   +  L  +  I     L++G C+  + + A  L  S+  +GL
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PNVV YN +I+G C +  ++ A ++F  ME KG+  + VT+NTL+ G   +   +    
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 252 LLHRMDERN 260
           LL  M +R 
Sbjct: 777 LLRDMVKRK 785



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 100/226 (44%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           + D A  LF  M  +  + ++V +  ++    K    +  + L+ +M + GI   + ++ 
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            L H      +   AL L  +M          T  + ++G C+     EA  L  ++  L
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             E  +  Y+ +I+GLCK   L  A E+F  + + G++ + VTYN +I G CN G+   A
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             L  DM  + + PN + F  L+   ++     +   L   M  R+
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 1/200 (0%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G+  +   E++L+L+ EM+     P+VV +  L   +  + + E  +    +M+   
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  ++   I   C+   +  A  +   +  L  +  I  +  L+ G C   ++  A+
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTLMLG 239
            L  S+ + G  PNVV YN +I   C +G ++ A +L  +ME KG +A + VT+NTL+ G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 240 CIRNNETSKVVELLHRMDER 259
              + E  +   +L  M +R
Sbjct: 216 LCYSGEWRQAARILRDMTKR 235



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 36/247 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+Q    P+   ++ L+         +        M++ G  H++ ++  LI+ +C+   
Sbjct: 56  MVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSR 115

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +L++  +M+  G  P++VT+ +L HG    +++  A  L   M              
Sbjct: 116 LSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASM-------------- 161

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
                 K+GY                E  +  Y+ LID LCK G +  A EL   + + G
Sbjct: 162 -----VKSGY----------------EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200

Query: 191 -LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            L  ++VTYN ++ G C  G+  +A  +  DM  + + P+  TF  L+   ++     + 
Sbjct: 201 RLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEA 260

Query: 250 VELLHRM 256
            EL  +M
Sbjct: 261 QELYKQM 267


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 144/258 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   YSTLIDG+CL G++D A +L   M   G   N VTY TLI
Sbjct: 464 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLI 523

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   + ++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 524 NGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 583

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    +A  +F+ L ++  +L    ++ +ID L K+G+   A +L
Sbjct: 584 IELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDL 643

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+PN  TY +M       G +++   LFL ME  G   +    N ++   ++
Sbjct: 644 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 703

Query: 243 NNETSKVVELLHRMDERN 260
             E ++    L  +DE++
Sbjct: 704 RGEITRAGTYLSMIDEKH 721



 Score =  174 bits (440), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 144/252 (57%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LLDLM++ G+ P+ +VY+ LI  +   G++D A  +F  M   G   + VTY  +I   C
Sbjct: 328 LLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILC 387

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K+  VE+++  + +M+ +G+ P  + YN+L HGL   ++ E A +L  EM    +   T 
Sbjct: 388 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 447

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            +N+ ID  CK G ++E+ +LF  +  +  +  I  YS LIDG C  GK++ A +L   +
Sbjct: 448 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGM 507

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             VGL PN VTY  +I+G+C   +M  A  LF +ME+ GV+P+ +T+N ++ G  +   T
Sbjct: 508 VSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 567

Query: 247 SKVVELLHRMDE 258
           +   EL  R+ E
Sbjct: 568 AAAKELYVRITE 579



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 3/249 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    + MI  G+ P   VY++LI G C   + +RA EL + M   G   N + +N+
Sbjct: 392 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 451

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   V ES  L+  M+  G++P ++TY+TL  G     +++ A+KL   M    
Sbjct: 452 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG 511

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TY T I+G CK   + +A  LF+ +        I  Y+ ++ GL +  +   A 
Sbjct: 512 LKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 571

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL---M 237
           EL+  +   G    + TYNI++HG C +   D A  +F ++    +     TFN +   +
Sbjct: 572 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 631

Query: 238 LGCIRNNET 246
           L   RN E 
Sbjct: 632 LKVGRNGEA 640



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 8/244 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---FVSMDINGCMHNVVTY 58
           D    +L  M +    P+ F  + L+ G C       A EL          G   +VV+Y
Sbjct: 140 DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSY 199

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
            T+ING+ K  D  ++ + Y EML + I P VVTY+++   L +   ++ A+++   M  
Sbjct: 200 TTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVK 259

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC-----ELGIEAYSCLIDGLCKI 173
           + V     TY + + G C +G   EA    + +R         E  I  Y  L+ G    
Sbjct: 260 NGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATK 319

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G L     L   + R G+ P+   YNI+I  +   G++D+A  +F  M  +G+ P+ VT+
Sbjct: 320 GALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTY 379

Query: 234 NTLM 237
             ++
Sbjct: 380 GAVI 383



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 5/251 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+   Y+T+I+GF   G+  +A   +  M       +VVTY+++I   CK + ++++
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF-----DEMQHSDVAAETSTYN 129
           + + + M+  G+ P   TY ++ HG     Q + A+        D ++   +  + +TY 
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYC 310

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T + G    G +V    L   +           Y+ LI    K GK++ A  +F  + + 
Sbjct: 311 TLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           GL P+ VTY  +I   C  G+++ A   F  M  +G++P  + +N+L+ G    N+  + 
Sbjct: 371 GLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 430

Query: 250 VELLHRMDERN 260
            EL+  M +R 
Sbjct: 431 EELILEMLDRG 441



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 9/233 (3%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P    Y+ LI   C    +D       ++   G     +T+  L+ G C  K   +++
Sbjct: 83  VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 76  NLY-SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHSDVAAETSTYNTF 131
           ++    M      P V +   L  GL + ++ + AL+L   M   +    A +  +Y T 
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+G  K G   +A   +  +   +    +  YS +I  LCK   ++ A E+  S+ + G+
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLD-----MEAKGVAPNCVTFNTLMLG 239
           MPN  TY  ++HG+C+ GQ  +A           +E  G+ P+  T+ TL+ G
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQG 315



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 4/207 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL- 112
            V TY  LI   C+   ++        ++ KG R   +T+  L  GL    +   A+ + 
Sbjct: 86  TVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 145

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDG 169
              M       +  +    + GLC      EA EL   +   R       + +Y+ +I+G
Sbjct: 146 LRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVING 205

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
             K G    A+  +  +    + P+VVTY+ +I   C    MDKA ++   M   GV PN
Sbjct: 206 FFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPN 265

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
           C T+ ++M G   + +  + +  L ++
Sbjct: 266 CRTYTSIMHGYCSSGQPKEAIGFLKKV 292



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 91/197 (46%), Gaps = 12/197 (6%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E++ +++ E+L +G   ++   N     +   H    A+  ++ M  +     T T +T+
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 132 --IDGLCKNGYIVEAAELFRTL-RVLKCELGIEA--YSCLIDGLCKIGKLETAWEL-FQS 185
             + G C     ++    F  L  V+K    +EA  ++ L+ GLC   +   A ++  + 
Sbjct: 91  AILIGCCCRADRLDLG--FAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL---FLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +  MP+V +  I++ G C++ +  +A +L     D    G AP+ V++ T++ G  +
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFK 208

Query: 243 NNETSKVVELLHRMDER 259
             ++ K     H M +R
Sbjct: 209 EGDSGKAYSTYHEMLDR 225



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/215 (20%), Positives = 75/215 (34%), Gaps = 70/215 (32%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFC----------------------------- 31
           MDEA +LL  M+  G++PN   Y TLI+G+C                             
Sbjct: 497 MDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNI 556

Query: 32  ------LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML--- 82
                  T     A+EL+V +  +G    + TYN +++G CK K  +++L ++  +    
Sbjct: 557 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 616

Query: 83  --------------------------------SKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
                                           S G+ P   TY  +   +     +E   
Sbjct: 617 LKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 676

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           +LF  M+ +    ++   N  +  L + G I  A 
Sbjct: 677 QLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 711



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 54/139 (38%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A R+   +    ++  A  ++ +ID     G    A++LFV+   NG + N  TY  +
Sbjct: 603 DDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLM 662

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
                    +EE   L+  M   G        N +   L +  ++  A      +     
Sbjct: 663 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 722

Query: 122 AAETSTYNTFIDGLCKNGY 140
           + E ST + FID L    Y
Sbjct: 723 SLEASTASLFIDLLSGGKY 741


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 145/256 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L + M+++ + PN   Y+TLI+G C    I+ A ELF  M   G +   V+YNT
Sbjct: 165 VEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 224

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK KD+  + +++ +M+     P VVTY TL  GL +  +V+ A ++ D M    
Sbjct: 225 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    +TY+  IDG CK   + EA +L   +        +  Y+ L++ LC+  KLE A+
Sbjct: 285 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 344

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ + +    P VVTYN ++   C+  Q+D AH L+ +M AKG  P+ +T++TL  G 
Sbjct: 345 KLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGL 404

Query: 241 IRNNETSKVVELLHRM 256
            R  +  +  EL+ +M
Sbjct: 405 TRAGKVHEAQELMEKM 420



 Score =  170 bits (430), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 140/260 (53%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L++ M  R   P+A  Y  +++  C T  ID A      M   G   +   YN 
Sbjct: 96  VEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF 154

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G C+ + VEE+  L+ +M+ + I P VVTYNTL +GL +  ++E A +LF EM    
Sbjct: 155 VLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YNT IDG CK   +V A ++F  +    C   +  Y+ LIDGL K GK++ A 
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAA 274

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + + G+ PNV TY+ +I GFC   ++D+AH L   M  +G+AP  VT+N L+   
Sbjct: 275 EVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 334

Query: 241 IRNNETSKVVELLHRMDERN 260
            R ++     +L   M +R 
Sbjct: 335 CRADKLEDAFKLFRGMAQRR 354



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 119/222 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M  +G  P    Y+TLIDGFC   ++  A+++F  M  + C+ NVVTY T
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K+  V+ +  +   M+ KG+ P V TY+ L  G  ++ +V+ A KL ++M    
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 319

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TYN  ++ LC+   + +A +LFR +   +C   +  Y+ L+  LC   +L+ A 
Sbjct: 320 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 379

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
            L+  +   G  P+ +TY+ +  G    G++ +A +L   M+
Sbjct: 380 RLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 126/250 (50%), Gaps = 1/250 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  R V P A  ++T+ DGF   G +++ +E++  M   G       Y  LI+  CK  +
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +E+  L   M  K  +   + Y+T+ + L ++++VE A +L ++M       +  TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGP 119

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++ LCK   I +A      +     +     Y+ ++ GLC+  K+E A  LF+ + +  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PNVVTYN +I+G C   +++ A++LF +M  KG  P  V++NTL+ G  +  +     
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 251 ELLHRMDERN 260
           ++  +M   N
Sbjct: 240 DVFDKMVRSN 249



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 84/155 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A+ +LD M+++GV PN   YS LIDGFC    +D A +L   M   G    VVTYN 
Sbjct: 270 VQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNI 329

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  C+   +E++  L+  M  +   PTVVTYNTL   L    Q++ A +L+ EM    
Sbjct: 330 LLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 389

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
              +  TY+T   GL + G + EA EL   +++ K
Sbjct: 390 CPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 424


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 144/253 (56%), Gaps = 12/253 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   YSTLIDG+CL G++D A +L   M   G   N VTY+TLI
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 320

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 321 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 380

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    +A ++F+ L ++  +L    ++ +ID L K+G+ + A +L
Sbjct: 381 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 440

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+PN  TY +M       G +++   LFL ME  G      T ++ ML  I 
Sbjct: 441 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG-----CTVDSGMLNFI- 494

Query: 243 NNETSKVVELLHR 255
                 V ELL R
Sbjct: 495 ------VRELLQR 501



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 131/244 (53%), Gaps = 12/244 (4%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR------------ARELFVSMDIN 49
           D+A      M+ RG+ P+   YS++I   C    +D+            + +LF  M   
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRI 272

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   +++TY+TLI+GYC    ++E++ L S M+S G++P  VTY+TL +G  +I ++E A
Sbjct: 273 GVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 332

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           L LF EM+ S V+ +  TYN  + GL +      A EL+  +     ++ +  Y+ ++ G
Sbjct: 333 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 392

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK    + A ++FQ+L  + L     T+NIMI      G+ D+A DLF+   + G+ PN
Sbjct: 393 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 452

Query: 230 CVTF 233
             T+
Sbjct: 453 YWTY 456



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 15/265 (5%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTYNTLIN 63
           +L  M + G  PN F Y+ L++G C       A EL   M  +   G   +VV+Y T+IN
Sbjct: 145 VLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL------------K 111
           G+ K  D +++ + Y EML +GI P VVTY+++   L +   ++               K
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEK 264

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           LFD M    V  +  TY+T IDG C  G + EA +L   +  +  +     YS LI+G C
Sbjct: 265 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 324

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           KI ++E A  LF+ +   G+ P+++TYNI++ G     +   A +L++ +   G      
Sbjct: 325 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 384

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T+N ++ G  +N  T   +++   +
Sbjct: 385 TYNIILHGLCKNKLTDDALQMFQNL 409



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 130/294 (44%), Gaps = 51/294 (17%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+   Y  LI   C  G +D       ++   G     +T+  L+ G C  K   +++
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 76  NL----------------YSEMLS-----------------------KGIRPTVVTYNTL 96
           ++                Y+ +L+                        G  P VV+Y T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN------------GYIVEA 144
            +G F+    + A   + EM    +  +  TY++ I  LCK             G ++E+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIES 262

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            +LF  +  +  +  I  YS LIDG C  GK++ A +L   +  VGL PN VTY+ +I+G
Sbjct: 263 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 322

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +C   +M+ A  LF +ME+ GV+P+ +T+N ++ G  +   T+   EL  R+ E
Sbjct: 323 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 376



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 4/157 (2%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYS 164
           E A  +FDE+      A     N  +  + ++      +   R  R    E+  +   Y 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL-DMEA 223
            LI   C+ G+L+  +    ++ + G     +T+  ++ G C D +   A D+ L  M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM-DER 259
            G  PN  ++N L+ G    N + + +ELLH M D+R
Sbjct: 152 LGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDR 188



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/239 (20%), Positives = 88/239 (36%), Gaps = 75/239 (31%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID----------------------- 37
           MDEA +LL  M+  G++PN   YSTLI+G+C    ++                       
Sbjct: 294 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 353

Query: 38  ------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML--- 82
                        A+EL+V +  +G    + TYN +++G CK K  +++L ++  +    
Sbjct: 354 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 413

Query: 83  --------------------------------SKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
                                           S G+ P   TY  +   +     +E   
Sbjct: 414 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 473

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV-----EAAELFRTLRVLKCELGIEAYS 164
           +LF  M+ +    ++   N  +  L + G +V      A     TL++L C + +  +S
Sbjct: 474 QLFLSMEDNGCTVDSGMLNFIVRELLQRGVVVVVSGESATTPPPTLKILTCGITVNPFS 532


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 144/253 (56%), Gaps = 12/253 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DLM++ GV+P+   YSTLIDG+CL G++D A +L   M   G   N VTY+TLI
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 320

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +  S   
Sbjct: 321 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 380

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            E STYN  + GLCKN    +A ++F+ L ++  +L    ++ +ID L K+G+ + A +L
Sbjct: 381 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 440

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F +    GL+PN  TY +M       G +++   LFL ME  G      T ++ ML  I 
Sbjct: 441 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG-----CTVDSGMLNFI- 494

Query: 243 NNETSKVVELLHR 255
                 V ELL R
Sbjct: 495 ------VRELLQR 501



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 131/244 (53%), Gaps = 12/244 (4%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR------------ARELFVSMDIN 49
           D+A      M+ RG+ P+   YS++I   C    +D+            + +LF  M   
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRI 272

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   +++TY+TLI+GYC    ++E++ L S M+S G++P  VTY+TL +G  +I ++E A
Sbjct: 273 GVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 332

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           L LF EM+ S V+ +  TYN  + GL +      A EL+  +     ++ +  Y+ ++ G
Sbjct: 333 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 392

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK    + A ++FQ+L  + L     T+NIMI      G+ D+A DLF+   + G+ PN
Sbjct: 393 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 452

Query: 230 CVTF 233
             T+
Sbjct: 453 YWTY 456



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 15/265 (5%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTYNTLIN 63
           +L  M + G  PN F Y+ L++G C       A EL   M  +   G   +VV+Y T+IN
Sbjct: 145 VLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL------------K 111
           G+ K  D +++ + Y EML +GI P VVTY+++   L +   ++               K
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEK 264

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           LFD M    V  +  TY+T IDG C  G + EA +L   +  +  +     YS LI+G C
Sbjct: 265 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 324

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           KI ++E A  LF+ +   G+ P+++TYNI++ G     +   A +L++ +   G      
Sbjct: 325 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 384

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T+N ++ G  +N  T   +++   +
Sbjct: 385 TYNIILHGLCKNKLTDDALQMFQNL 409



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 130/294 (44%), Gaps = 51/294 (17%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+   Y  LI   C  G +D       ++   G     +T+  L+ G C  K   +++
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 76  NL----------------YSEMLS-----------------------KGIRPTVVTYNTL 96
           ++                Y+ +L+                        G  P VV+Y T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN------------GYIVEA 144
            +G F+    + A   + EM    +  +  TY++ I  LCK             G ++E+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIES 262

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            +LF  +  +  +  I  YS LIDG C  GK++ A +L   +  VGL PN VTY+ +I+G
Sbjct: 263 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 322

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +C   +M+ A  LF +ME+ GV+P+ +T+N ++ G  +   T+   EL  R+ E
Sbjct: 323 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 376



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 44/203 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA +LL  M+  G++PN   YSTLI+G+C    ++ A  LF  M+ +G   +++TYN 
Sbjct: 294 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 353

Query: 61  LI-----------------------------------NGYCKTKDVEESLNLYSEMLSKG 85
           ++                                   +G CK K  +++L ++  +    
Sbjct: 354 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 413

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           ++    T+N +   L ++ + + A  LF     + +     TY    + +   G + E  
Sbjct: 414 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 473

Query: 146 ELFRTLRVLKCELGIEAYSCLID 168
           +LF         L +E   C +D
Sbjct: 474 QLF---------LSMEDNGCTVD 487



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 4/157 (2%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYS 164
           E A  +FDE+      A     N  +  + ++      +   R  R    E+  +   Y 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL-DMEA 223
            LI   C+ G+L+  +    ++ + G     +T+  ++ G C D +   A D+ L  M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM-DER 259
            G  PN  ++N L+ G    N + + +ELLH M D+R
Sbjct: 152 LGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDR 188


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 133/226 (58%), Gaps = 3/226 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +  + MI+R + P+ F Y+++I G C+ G++D A+++   M   GC  +VVTYNTLI
Sbjct: 262 EAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLI 321

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CKTK V+E   L  EM  +G+    VT+NT+  G F+  + + A ++F  M      
Sbjct: 322 NGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR--- 378

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  + GLC N  + +A  LF +++  + EL I  Y+ +I G+C IG +E AW+L
Sbjct: 379 PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDL 438

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           F SL   GL P+VVTY  MI GFC     DKA  L+  M+  G+ P
Sbjct: 439 FCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 139/257 (54%), Gaps = 5/257 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTL 61
           +A+RL+  M+ R + PN   ++ LI+ F   G+   A++ +  M I  C+  +V TYN++
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEM-IRRCIDPDVFTYNSM 285

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C    V+E+  +   M++KG  P VVTYNTL +G  +  +V+   KL  EM    +
Sbjct: 286 IHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGL 345

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +T T+NT I G  + G    A E+F  +        I  YS L+ GLC   ++E A  
Sbjct: 346 VVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALV 402

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+S+ +  +  ++ TYNI+IHG C  G ++ A DLF  +  KG+ P+ VT+ T++ G  
Sbjct: 403 LFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFC 462

Query: 242 RNNETSKVVELLHRMDE 258
           R     K   L  +M E
Sbjct: 463 RKRLWDKADFLYRKMQE 479



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 2/250 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G  P+    S+LI+GFC    +  A +L   M+   C  +VV YNT+I+G+CKT  
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGL 189

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V  +L L+  M   G+R   VTYN+L  GL    +   A +L  +M   D+     T+  
Sbjct: 190 VNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTA 249

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKC-ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            I+   + G  +EA + +  + + +C +  +  Y+ +I GLC  G+++ A ++   +   
Sbjct: 250 LINAFVREGKFLEAKKFYEEM-IRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTK 308

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+VVTYN +I+GFC   ++D+   L  +M  +G+  + VTFNT++ G  +       
Sbjct: 309 GCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA 368

Query: 250 VELLHRMDER 259
            E+  RM  R
Sbjct: 369 QEIFSRMGSR 378



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 132/255 (51%), Gaps = 3/255 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L+  M +   + +  +Y+T+IDGFC TG ++ A  LF  M+ +G   + VTYN+L+ 
Sbjct: 158 AVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVT 217

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C +    ++  L  +M+ + I P V+T+  L +      +   A K ++EM    +  
Sbjct: 218 GLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDP 277

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ I GLC +G + EA ++   +    C   +  Y+ LI+G CK  +++   +L 
Sbjct: 278 DVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLV 337

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + + GL+ + VT+N +I G+   G+ D A ++F  M   G  PN  T++ L+ G   N
Sbjct: 338 REMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYN 394

Query: 244 NETSKVVELLHRMDE 258
               K + L   M +
Sbjct: 395 WRVEKALVLFESMQK 409



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN- 59
           +DEA  L   MIQ    P+   +S L+     +   D    LF +M+I G  H++ TYN 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 60  ----------------------------------TLINGYCKTKDVEESLNLYSEMLSKG 85
                                             +LING+C+   V  +++L S+M    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +  VV YNT+  G  +   V +AL LF  M+   V A+T TYN+ + GLC +G   +AA
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L R + +      +  ++ LI+   + GK   A + ++ + R  + P+V TYN MIHG 
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  GQ+D+A  +   M  KG  P+ VT+NTL+ G  +     +  +L+  M +R
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQR 343



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 92/191 (48%)

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           +++E+++L+  M+     P++V ++ L   + +    +  + LF  M+   +  +  TYN
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I+ LC+    V A  +   +     E  +   S LI+G C+  ++  A +L   +  +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
               +VV YN +I GFC  G ++ A  LF  ME  GV  + VT+N+L+ G   +   S  
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 250 VELLHRMDERN 260
             L+  M  R+
Sbjct: 229 ARLMRDMVMRD 239



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 51/88 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + M +  +  +   Y+ +I G C+ G ++ A +LF S+   G   +VVTY T
Sbjct: 397 VEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTT 456

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRP 88
           +I+G+C+ +  +++  LY +M   G+ P
Sbjct: 457 MISGFCRKRLWDKADFLYRKMQEDGLLP 484


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 139/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL D MI++ + P   +Y+ LI G C    I  A  +F +M  +G + N+ TYNT++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   V+++L LY EML  G+ P VVT+  L  GL +  ++  A K   +M    V 
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  IDG CK G + EA  L   +   +    +  YS LI GLC + ++E A  L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q + + G +PN VTYN +I G+C +G M+KA ++   M  KG+ PN +TF+TL+ G  +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 243 NNETSKVVELLHRM 256
             +    + L   M
Sbjct: 451 AGKMEAAMGLYTEM 464



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 129/249 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG  PN   Y TLIDG C  G+  +A  LF  M        VV Y  LI G C    
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E+ +++  M + G+ P + TYNT+  G  +I  V+ AL+L+ EM    +     T+  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGLCK   +V A +    +        I  Y+CLIDG CK G L  A  L   + +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++P+V TY+I+I G C   +M++A  L  +M+ KG  PN VT+NTL+ G  +     K +
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 251 ELLHRMDER 259
           E+  +M E+
Sbjct: 424 EVCSQMTEK 432



 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 134/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   M+  G+ PN   +  LIDG C T E+  AR+  + M   G + N+  YN 
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++ E+L+L+SE+    I P V TY+ L  GL  + ++E A  L  EM+   
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT IDG CK G + +A E+   +     E  I  +S LIDG CK GK+E A 
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +   GL+P+VV Y  +I G   DG   +A  L  +M+  G+ PN  T + L+ G 
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 241 IRNNETSKVVELL 253
            ++   S  ++L 
Sbjct: 519 CKDGRISDAIKLF 531



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 114/219 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A + L  M   GV PN FVY+ LIDG+C  G +  A  L   ++ +  + +V TY+ 
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C    +EE+  L  EM  KG  P  VTYNTL  G  +   +E A+++  +M    
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T++T IDG CK G +  A  L+  + +      + AY+ LIDG  K G  + A+
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
            L + +   GL PNV T + +I G C DG++  A  LFL
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 5/235 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  V+  LI  F   G ++ A  ++  MD+   M      N +++G  K    +    +
Sbjct: 126 PN--VFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQAC---NMVLDGLVKKGRFDTMWKV 180

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y +M+++G  P VVTY TL  G         A +LFDEM    +      Y   I GLC 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              I EA  +FRT+R       +  Y+ ++DG CKI  ++ A EL+Q +   GL+PNVVT
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           + I+I G C   +M  A    +DM + GV PN   +N L+ G  +    S+ + L
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 14/258 (5%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  ++  L+I  G  P  F+ ++LI  +  TG +  A  +F  +       N++++ ++I
Sbjct: 649 EGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIP----SKNLISWTSVI 704

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + Y   +   ++L L+ +M    ++P +VT         ++  ++    +   ++H  + 
Sbjct: 705 SAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLD 764

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +    N+ I+   K G I  A      L      +G+   +C   GL + GK     + 
Sbjct: 765 TDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGV-LMACSHAGLVEEGK-----QH 818

Query: 183 FQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           F+S+     L P +  +  M+   C  G + +A++  L M    V PN V + TL+  C 
Sbjct: 819 FRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACS 875

Query: 242 RNNETSKVVELLHRMDER 259
                 K + + +++ +R
Sbjct: 876 LQGMWDKKMLVRNQIKQR 893



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 25/175 (14%)

Query: 108 HALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--------------- 151
            AL+LF  + + +D+A     Y+  I  L       +A  L R L               
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111

Query: 152 ------RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                 R+   +     +  LI    ++G +E A  ++    ++ ++P +   N+++ G 
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYY---KMDVLPAMQACNMVLDGL 168

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              G+ D    ++ DM A+G +PN VT+ TL+ GC R  +  K   L   M E+ 
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 95/258 (36%), Gaps = 26/258 (10%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS---MDINGCMHNVVTYN 59
           EA RL   M + G+ PN F  S LIDG C  G I  A +LF++    D  G   N +  +
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRS 550

Query: 60  ---------TLINGYC-------KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI 103
                    +L  G         +   +  + N     L   ++P     N       + 
Sbjct: 551 LYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPP--KSNQTLKRYLQS 608

Query: 104 HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK-NGYIVEAAELFRTLRVLKCELGIEA 162
                 L  F  +   + ++  S    F    C     +VE  ++   +     E  I  
Sbjct: 609 SNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFL 668

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
            + LI      G +  A  +F  +P      N++++  +I  + ++ + +KA  LF  M+
Sbjct: 669 QTSLISMYSATGNVADAHNMFDEIPS----KNLISWTSVISAYVDNQRPNKALQLFRQMQ 724

Query: 223 AKGVAPNCVTFNTLMLGC 240
              V P+ VT    +  C
Sbjct: 725 MDDVQPDIVTVTVALSAC 742


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 139/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL D MI++ + P   +Y+ LI G C    I  A  +F +M  +G + N+ TYNT++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   V+++L LY EML  G+ P VVT+  L  GL +  ++  A K   +M    V 
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  IDG CK G + EA  L   +   +    +  YS LI GLC + ++E A  L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q + + G +PN VTYN +I G+C +G M+KA ++   M  KG+ PN +TF+TL+ G  +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 243 NNETSKVVELLHRM 256
             +    + L   M
Sbjct: 451 AGKMEAAMGLYTEM 464



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 129/250 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG  PN   Y TLIDG C  G+  +A  LF  M        VV Y  LI G C    
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E+ +++  M + G+ P + TYNT+  G  +I  V+ AL+L+ EM    +     T+  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGLCK   +V A +    +        I  Y+CLIDG CK G L  A  L   + +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++P+V TY+I+I G C   +M++A  L  +M+ KG  PN VT+NTL+ G  +     K +
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 251 ELLHRMDERN 260
           E+  +M E+ 
Sbjct: 424 EVCSQMTEKG 433



 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 134/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   M+  G+ PN   +  LIDG C T E+  AR+  + M   G + N+  YN 
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++ E+L+L+SE+    I P V TY+ L  GL  + ++E A  L  EM+   
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT IDG CK G + +A E+   +     E  I  +S LIDG CK GK+E A 
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +   GL+P+VV Y  +I G   DG   +A  L  +M+  G+ PN  T + L+ G 
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 241 IRNNETSKVVELL 253
            ++   S  ++L 
Sbjct: 519 CKDGRISDAIKLF 531



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 128/255 (50%), Gaps = 13/255 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   + +  + P+ F YS LI G C    ++ A  L   M   G + N VTYNT
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++E+++ + S+M  KGI P ++T++TL  G  +  ++E A+ L+ EM    
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG  K+G   EA  L + ++       +   SCLIDGLCK G++  A 
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 181 ELF-------------QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           +LF               L R    PN V Y  +I G C DG++ KA   F DM   G+ 
Sbjct: 529 KLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588

Query: 228 PNCVTFNTLMLGCIR 242
           P+  T   ++ G  R
Sbjct: 589 PDVFTCIVIIQGHFR 603



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 21/256 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  LL  M ++G  PNA  Y+TLIDG+C  G +++A E+   M   G   N++T++T
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK   +E ++ LY+EM+ KG+ P VV Y  L  G F+    + A +L  EMQ + 
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-----------------RTLRVLKCELGIEAY 163
           +     T +  IDGLCK+G I +A +LF                 R+L    C      Y
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSL----CSPNHVMY 559

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + LI GLC  G++  A + F  +   GL P+V T  ++I G      +     L  D+  
Sbjct: 560 TALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILK 619

Query: 224 KGVAPNCVTFNTLMLG 239
            G+ PN   +  L  G
Sbjct: 620 MGIIPNSSVYRVLAKG 635



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 5/235 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  V+  LI  F   G ++ A  ++  MD+   M      N +++G  K    +    +
Sbjct: 126 PN--VFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQAC---NMVLDGLVKKGRFDTMWKV 180

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y +M+++G  P VVTY TL  G         A +LFDEM    +      Y   I GLC 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              I EA  +FRT+R       +  Y+ ++DG CKI  ++ A EL+Q +   GL+PNVVT
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           + I+I G C   +M  A    +DM + GV PN   +N L+ G  +    S+ + L
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 13/155 (8%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-------------MDIN 49
           EA RL   M + G+ PN F  S LIDG C  G I  A +LF++             +D +
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRS 550

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
            C  N V Y  LI G C    + ++   +S+M   G+RP V T   +  G F    +   
Sbjct: 551 LCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDV 610

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           + L  ++    +   +S Y     G  ++GY+  A
Sbjct: 611 MMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 25/175 (14%)

Query: 108 HALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--------------- 151
            AL+LF  + + +D+A     Y+  I  L       +A  L R L               
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111

Query: 152 ------RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                 R+   +     +  LI    ++G +E A  ++    ++ ++P +   N+++ G 
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYY---KMDVLPAMQACNMVLDGL 168

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              G+ D    ++ DM A+G +PN VT+ TL+ GC R  +  K   L   M E+ 
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +Y+ LI G C  G I +A + F  M  +G   +V T   +I G+ +   + + + L
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
            +++L  GI P    Y  L  G  E   ++ AL+  +++ 
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLS 653


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M++  V  +  VYSTL+DG+CL  E++ A+ +F +M   G   +V  Y+ 
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSI 343

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK K V+E+LNL+ E+  K + P  VTY +L   L +  ++ +   LFDEM    
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  ID LCKNG++  A  LF  ++       +  ++ L+DGLCK+G+L+ A 
Sbjct: 404 QPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNAL 463

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E FQ L   G   NV TY +MI+G C +G +D+A  L   ME  G   + VTF  ++   
Sbjct: 464 EFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAF 523

Query: 241 IRNNETSKVVELLHRMDER 259
              +E  K  +L+  M  R
Sbjct: 524 FDKDENDKAEKLVREMIAR 542



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA R  D ++ +G R +   Y  LI+G C  GE   A  L   ++      NVV Y+ 
Sbjct: 144 VKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSM 203

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK   V+E+ +LY+EM+ KGI P VVTY+ L  G   + Q+  A+ L +EM   +
Sbjct: 204 IIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLEN 263

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   +D LCK G + EA  +   +      L +  YS L+DG C + ++  A 
Sbjct: 264 INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAK 323

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++ ++G+ P+V  Y+IMI+G C   ++D+A +LF ++  K + P+ VT+ +L+   
Sbjct: 324 RVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCL 383

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   S V +L   M +R
Sbjct: 384 CKSGRISYVWDLFDEMLDR 402



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 132/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M+ +G+ P+   YS L+ GFC+ G+++RA +L   M +     ++ TY  
Sbjct: 214 VDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTI 273

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   V+E+ N+ + M+   +   VV Y+TL  G   +++V +A ++F  M    
Sbjct: 274 LVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMG 333

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   Y+  I+GLCK   + EA  LF  +           Y+ LID LCK G++   W
Sbjct: 334 VTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVW 393

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G  P+V+TYN +I   C +G +D+A  LF  M+ + + PN  TF  L+ G 
Sbjct: 394 DLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGL 453

Query: 241 IRNNETSKVVELLHRM 256
            +       +E    +
Sbjct: 454 CKVGRLKNALEFFQDL 469



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 116/236 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A    + M      P+ F ++ ++           A  L+  M+++    +  T N +
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +C    V  + +  S++L  G +P  +T NTL  GL    +V+ AL+  D++     
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                +Y   I+G+CK G    A  L R +        +  YS +ID LCK   ++ A++
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L+  +   G+ P+VVTY+I++ GFC  GQ+++A DL  +M  + + P+  T+  L+
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/155 (21%), Positives = 70/155 (45%)

Query: 104 HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           H  + A+  F+ M H      T  +N  +  L        A  L++ + + + E      
Sbjct: 37  HNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTL 96

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + +I+  C  G++  A+     + ++G  PN +T N ++ G C +G++ +A      + A
Sbjct: 97  NIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLA 156

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +G   + +++  L+ G  +  ET   + LL R++ 
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIER 191


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 134/250 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +R V P+ F Y+ LIDG C   + D+A E+   M   G   + VT+N++++G CK   
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            E + +L + M  +  RP+  TYNTL  GL +   V+ A  L DE   S    +  TY+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
             DGLCK G I EA EL + +    C   +  Y+ LIDGLCK  K E A+EL ++L   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +P+VVTY I++ G C +G++DKA  +   M  +G  P+ +T+  LM G  R     +  
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 251 ELLHRMDERN 260
            +   M  ++
Sbjct: 241 HIFKEMVSKD 250



 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 142/253 (56%), Gaps = 3/253 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+AS +L  M+ RGV P+   +++++DG C  G+ +RA  L   M    C  +  TYNTL
Sbjct: 27  DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTL 86

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK ++V+ +  L  E +S G  P VVTY+ L  GL +  +++ A +L  EM  +  
Sbjct: 87  ISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGC 146

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYNT IDGLCK     +A EL  TL        +  Y+ ++DGLCK G+L+ A +
Sbjct: 147 TPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK 206

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-- 239
           + + + + G  P+V+TY  ++ G C  G++D+AH +F +M +K    + + + +L+ G  
Sbjct: 207 MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYC 266

Query: 240 -CIRNNETSKVVE 251
              R  E  KVV+
Sbjct: 267 KSSRTKEAQKVVD 279



 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 132/256 (51%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L+D  +  G  P+   YS L DG C  G ID A EL   M  NGC  N+VTYNT
Sbjct: 96  VDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNT 155

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK    E++  L   ++S G  P VVTY  +  GL +  +++ ALK+ + M    
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 215

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   ++GLC+ G + EA  +F+ +    C     AY  L++G CK  + + A 
Sbjct: 216 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 275

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +      P +  YN ++ G+C +G++D+  ++F DM  +G  PN  T+N +M G 
Sbjct: 276 KVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 332

Query: 241 IRNNETSKVVELLHRM 256
            ++ +  +    L  M
Sbjct: 333 CKHGKVDEAFPFLESM 348



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 138/258 (53%), Gaps = 7/258 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++++ M++RG  P+   Y+ L++G C TG +D A  +F  M    C  + + Y +
Sbjct: 201 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           L+NGYCK+   +E+     + +  GIR  P +  YN L  G  +  +++    +F++M  
Sbjct: 261 LVNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMAC 315

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                   TYN  +DGLCK+G + EA     ++    C   + +Y+ +IDGL K  K + 
Sbjct: 316 RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKE 375

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A ++   + + G+ P+ VTYN ++  FC + + D A  +  +M   GV P+ VT+NTL+ 
Sbjct: 376 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLIS 435

Query: 239 GCIRNNETSKVVELLHRM 256
           G  + N      EL+H M
Sbjct: 436 GLSQTNRLGDAYELMHEM 453



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 5/259 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++LD MIQ G+ P+A  Y+TL+  FC     D A  +  +M   G   + VTYNTLI
Sbjct: 375 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 434

Query: 63  NGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +G  +T  + ++  L  EML  G +     TYNT+   L +   ++ AL L D M    V
Sbjct: 435 SGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGV 494

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A T TYN FID LCK G + EA+ L   +  L+ E+   +Y+ +I GLCK  +L+ A +
Sbjct: 495 EANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEV---SYTTVIIGLCKAEQLDRASK 551

Query: 182 LFQSLPRV-GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           L + +  V GL     T+N++I  F    ++D+A  L   M  +G +P+ +T+N ++   
Sbjct: 552 LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCL 611

Query: 241 IRNNETSKVVELLHRMDER 259
            + ++  K  EL   M  R
Sbjct: 612 CKLDKVDKAWELFDEMAVR 630



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   L+ M   G  P+   Y+ +IDG     +   AR++   M   G   + VTYNT
Sbjct: 338 VDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNT 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHS 119
           L+  +CK +  ++++ +   M+  G+ P  VTYNTL  GL + +++  A +L  EM ++ 
Sbjct: 398 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V +  +TYNT ID LCK G + +A  L   +     E     Y+  ID LCK G+L+ A
Sbjct: 458 CVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 517

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLML 238
             L   L  +  + + V+Y  +I G C   Q+D+A  L  +M A KG+     TFN L+ 
Sbjct: 518 SSL---LSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLID 574

Query: 239 GCIRNNETSKVVELLHRMDER 259
              +     + + LL  M +R
Sbjct: 575 AFTKTKRLDEALTLLELMVQR 595



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 4/187 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYN 59
           +DEAS LL  M       +   Y+T+I G C   ++DRA +L   M  + G      T+N
Sbjct: 514 LDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 570

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+ + KTK ++E+L L   M+ +G  P+V+TYN +   L ++ +V+ A +LFDEM   
Sbjct: 571 LLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 630

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            + A + +Y   I GLC  G   EA ++   +    CE+       L   L   G+ E A
Sbjct: 631 GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEA 690

Query: 180 WELFQSL 186
            EL + +
Sbjct: 691 AELLRRM 697


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 95/262 (36%), Positives = 145/262 (55%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR---ARELFVSMDINGCMHNVVT 57
           ++ A  +++ M   GV PN   Y+TLIDG+C  G I +   A  +   M   G   N VT
Sbjct: 171 LNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVT 230

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN LI+G+CK ++V  ++ ++ EM  +G+RP VVTYN L +GL    +V+ A+ L D+M 
Sbjct: 231 YNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMV 290

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            SD+     T+N  I+G CKN  + EA  LF  +     +     Y+ LID  CK G++E
Sbjct: 291 SSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRME 350

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A+ L+  +   G+ P V TYN +I G C  G +  A  L  +M +K ++ + VT+N L+
Sbjct: 351 DAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILI 410

Query: 238 LGCIRNNETSKVVELLHRMDER 259
               +  E+ K V+LL  M E+
Sbjct: 411 DSLCKKGESRKAVKLLDEMFEK 432



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 138/259 (53%), Gaps = 6/259 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA---RELFVSMDINGCMHNVVTYNT 60
           A R+   M ++G+RPN   Y+ LI+G C  G++D A   R+  VS D+     NVVT+N 
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLE---PNVVTHNV 303

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K V E++NL+++M  +G+ P  +TY TL     +  ++E A  L++ M    
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  E STYN  I GLC+ G +  A  L   +   K    +  Y+ LID LCK G+   A 
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL P+ VTYN ++ G+C +G +  A  +   ME KG   N VT N L+ G 
Sbjct: 424 KLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGF 483

Query: 241 IRNNETSKVVELLHRMDER 259
                      LL+ M ER
Sbjct: 484 CLKGRLEDANGLLNEMLER 502



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 127/236 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L D M+   + PN   ++ LI+GFC    ++ A  LF  M+  G   N +TY T
Sbjct: 279 VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTT 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ YCK   +E++  LY+ M+ +GI P V TYN L  GL     V+ A  L +EM    
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++A+  TYN  ID LCK G   +A +L   +           Y+ L+DG C+ G L  A 
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            +   + R G   NVVT+N++I GFC  G+++ A+ L  +M  +G+ PN  T+  +
Sbjct: 459 IVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 132/247 (53%), Gaps = 9/247 (3%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N+ +   L+  F    +I R  E F      G   ++++ N L++G  K  +  +   +Y
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVY 143

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM+ + I   V+++N + +GL ++ ++  A  + ++M+   V+    TYNT IDG CK 
Sbjct: 144 REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203

Query: 139 GYIVEAAELFRTLRVLK--CELGI----EAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           G I    ++++   +LK     GI      Y+ LIDG CK   +  A  +F  + R GL 
Sbjct: 204 GRI---GKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           PNVVTYNI+I+G C+DG++D+A  L   M +  + PN VT N L+ G  +N   ++ + L
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320

Query: 253 LHRMDER 259
            + M+++
Sbjct: 321 FNDMEKQ 327



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L++ M+ + +  +   Y+ LID  C  GE  +A +L   M   G   + VTYNTL++
Sbjct: 387 ARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMD 446

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+  ++  +L + + M  KG +  VVT+N L  G     ++E A  L +EM    +  
Sbjct: 447 GYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVP 506

Query: 124 ETSTYNTFIDGLCKNGYI 141
             +TY    + + + G++
Sbjct: 507 NRTTYEIIKEEMMEKGFV 524



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 58/100 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M ++G+ P+   Y+TL+DG+C  G +  A  +   M+  G   NVVT+N LI
Sbjct: 421 KAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLI 480

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
            G+C    +E++  L +EML +G+ P   TY  +   + E
Sbjct: 481 KGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMME 520


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 139/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL D MI++ + P   +Y+ LI G C    I  A  +F +M  +G + N+ TYNT++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   V+++L LY EML  G+ P VVT+  L  GL +  ++  A K   +M    V 
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  IDG CK G + EA  L   +   +    +  YS LI GLC + ++E A  L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q + + G +PN VTYN +I G+C +G M+KA ++   M  KG+ PN +TF+TL+ G  +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 243 NNETSKVVELLHRM 256
             +    + L   M
Sbjct: 451 AGKMEAAMGLYTEM 464



 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 129/250 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG  PN   Y TLIDG C  G+  +A  LF  M        VV Y  LI G C    
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E+ +++  M + G+ P + TYNT+  G  +I  V+ AL+L+ EM    +     T+  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGI 303

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGLCK   +V A +    +        I  Y+CLIDG CK G L  A  L   + +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++P+V TY+I+I G C   +M++A  L  +M+ KG  PN VT+NTL+ G  +     K +
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 251 ELLHRMDERN 260
           E+  +M E+ 
Sbjct: 424 EVCSQMTEKG 433



 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 134/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   M+  G+ PN   +  LIDG C T E+  AR+  + M   G + N+  YN 
Sbjct: 279 VKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++ E+L+L+SE+    I P V TY+ L  GL  + ++E A  L  EM+   
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT IDG CK G + +A E+   +     E  I  +S LIDG CK GK+E A 
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +   GL+P+VV Y  +I G   DG   +A  L  +M+  G+ PN  T + L+ G 
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 241 IRNNETSKVVELL 253
            ++   S  ++L 
Sbjct: 519 CKDGRISDAIKLF 531



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 128/255 (50%), Gaps = 13/255 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   + +  + P+ F YS LI G C    ++ A  L   M   G + N VTYNT
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++E+++ + S+M  KGI P ++T++TL  G  +  ++E A+ L+ EM    
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG  K+G   EA  L + ++       +   SCLIDGLCK G++  A 
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 181 ELF-------------QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           +LF               L R    PN V Y  +I G C DG++ KA   F DM   G+ 
Sbjct: 529 KLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588

Query: 228 PNCVTFNTLMLGCIR 242
           P+  T   ++ G  R
Sbjct: 589 PDVFTCIVIIQGHFR 603



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 130/256 (50%), Gaps = 21/256 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  LL  M ++G  PNA  Y+TLIDG+C  G +++A E+   M   G   N++T++T
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK   +E ++ LY+EM+ KG+ P VV Y  L  G F+    + A +L  EMQ + 
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-----------------RTLRVLKCELGIEAY 163
           +     T +  IDGLCK+G I +A +LF                 R+L    C      Y
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSL----CSPNHVMY 559

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + LI GLC  G++  A + F  +   GL P+V T  ++I G      +     L  D+  
Sbjct: 560 TALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILK 619

Query: 224 KGVAPNCVTFNTLMLG 239
            G+ PN   +  L  G
Sbjct: 620 MGIIPNSSVYRVLAKG 635



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 114/235 (48%), Gaps = 5/235 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  V+  LI  F   G ++ A  ++  MD+   M      N +++G  K    +    +
Sbjct: 126 PN--VFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQAC---NMVLDGLVKKGRFDTMWKV 180

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y +M+++G  P VVTY TL  G         A +LFDEM    +      Y   I GLC 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              I EA  +FRT+R       +  Y+ ++DG CKI  ++ A EL+  +   GL+PNVVT
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVT 300

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           + I+I G C   +M  A    +DM + GV PN   +N L+ G  +    S+ + L
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 13/155 (8%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-------------MDIN 49
           EA RL   M + G+ PN F  S LIDG C  G I  A +LF++             +D +
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRS 550

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
            C  N V Y  LI G C    + ++   +S+M   G+RP V T   +  G F    +   
Sbjct: 551 LCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDV 610

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           + L  ++    +   +S Y     G  ++GY+  A
Sbjct: 611 MMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 87/224 (38%), Gaps = 19/224 (8%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  +Y+ LI G C  G I +A + F  M  +G   +V T   +I G+ +   + + + L
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF-IDGLC 136
            +++L  GI P    Y  L  G  E   ++ AL    E         +  + ++ I    
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRF 673

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           +   + E  E   +        GI ++  L+     I K  +  E+ + +P +G      
Sbjct: 674 QLCVVTEKKECHSSYLT---AFGIHSF-VLLWYFHTILKPPSPHEILKKVPFIGQK---- 725

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                      D + +KA  LF  M+     P+ VT    +  C
Sbjct: 726 ----------GDQRPNKALQLFRQMQMDDXQPDIVTVTVALSAC 759



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 25/175 (14%)

Query: 108 HALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--------------- 151
            AL+LF  + + +D+A     Y+  I  L       +A  L R L               
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCS 111

Query: 152 ------RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                 R+   +     +  LI    ++G +E A  ++    ++ ++P +   N+++ G 
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYY---KMDVLPAMQACNMVLDGL 168

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              G+ D    ++ DM A+G +PN VT+ TL+ GC R  +  K   L   M E+ 
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 104/261 (39%), Gaps = 35/261 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +L   M     +P+    +  +      G +D    +   +   G   ++   N+L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN Y K  ++  +  L+     K     V T+ ++  G     Q E AL+LF EM+ ++ 
Sbjct: 791 INMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 122 AAETSTYN-------------TFIDGL--CKN-GYIVEAAELFRTLRV-LKCELGIEAYS 164
            A  +  N             TF+  L  C + G + E  + FR+++        I  + 
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI-----------HGFCNDGQMDK 213
           C++D LC+ G L  A+E    +P   + PN V +  ++           +G  N     +
Sbjct: 907 CMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSE 963

Query: 214 AHDLFLDMEAKGVAPNCVTFN 234
           A    L++E   V  N +  N
Sbjct: 964 ARRQLLELEPSHVGDNVIMSN 984



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 93/221 (42%), Gaps = 24/221 (10%)

Query: 37  DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           ++A +LF  M ++    ++VT    ++       ++    +++ +  +G+   +   N+L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL----- 151
            +   +  ++  A +LFD  Q  DV    +T+ + I G   +G   EA +LF  +     
Sbjct: 791 INMYSKCGEIGTARRLFDGTQKKDV----TTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 152 RVLKCELGIEAYSCLI-----------DGLCKIGKLETAWELFQSLPR-VGLMPNVVTYN 199
           R  K +   E  S L+                 G +E   + F+S+     L P +  + 
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            M+   C  G + +A++  L M    V PN V + TL+  C
Sbjct: 907 CMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGAC 944


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  176 bits (446), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/255 (38%), Positives = 144/255 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +LL  M  RG  P+   YST+I+G+C  GE+ R  +L   M I G   N  TYN +I
Sbjct: 271 EAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVI 330

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CKT  V E+  +  EM+S+GI P  V Y TL  G  ++  V  A +LFDEMQ   ++
Sbjct: 331 LLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKIS 390

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   I GLC+ G ++EA +LF  +   + E     Y+ LIDG CK GK++ A+ L
Sbjct: 391 PDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSL 450

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + ++GL PN+VTY  +  G C  G++D A++L  +M  KG+  N  T+N+L+ G  +
Sbjct: 451 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 510

Query: 243 NNETSKVVELLHRMD 257
                + V+L+  M+
Sbjct: 511 AGNIDQAVKLMKDME 525



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 135/245 (55%), Gaps = 1/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A RL D M +R + P+   Y+ +I G C TG +  A +LF  M       + VTY  
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK   ++E+ +L+++ML  G+ P +VTY  L  GL +  +V+ A +L  EM    
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ ++GLCK G I +A +L + + V         Y+ L+D  CK  ++  A 
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
           EL + +    L P VVT+N++++GFC  G ++    L   M  KG+ PN  T+N+L+   
Sbjct: 554 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613

Query: 240 CIRNN 244
           CIRNN
Sbjct: 614 CIRNN 618



 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 124/237 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+L  MI  G+ P+  +Y+TLIDGFC  G +  A  LF  M       + +TY  +I
Sbjct: 341 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 400

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+T  V E+  L+ EM+ K + P  VTY  L  G  +  +++ A  L ++M    + 
Sbjct: 401 CGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLT 460

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY    DGLCK G +  A EL   +     EL I  Y+ L++GLCK G ++ A +L
Sbjct: 461 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 520

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +   G  P+ VTY  ++  +C   +M +AH+L   M  + + P  VTFN LM G
Sbjct: 521 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 577



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 3/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M+ + + P+   Y+ LIDG+C  G++  A  L   M   G   N+VTY  L 
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  +V+ +  L  EM  KG+   + TYN+L +GL +   ++ A+KL  +M+ +   
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T +D  CK+  +V A EL R +   + +  +  ++ L++G C  G LE   +L
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI 241
            + +   G+MPN  TYN +I  +C    M    +++  M AKGV P+  T+N L+ G C 
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 650

Query: 242 RNNETSKVVELLHR 255
             N   K    LHR
Sbjct: 651 ARN--MKEAWFLHR 662



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  L + M+Q G+ PN   Y+ L DG C  GE+D A EL   M   G   N+ TYN+
Sbjct: 444 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 503

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK  ++++++ L  +M   G  P  VTY TL     +  ++  A +L  +M   +
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+N  ++G C +G + +  +L + +           Y+ LI   C    +    
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+++ +   G++P+  TYNI+I G C    M +A  L  DM  KG      ++N L+ G 
Sbjct: 624 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 683

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  EL  +M
Sbjct: 684 YKRKKFLEARELFEQM 699



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 8/238 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LL  M ++G+  N + Y++L++G C  G ID+A +L   M++ G   + VTY T
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ YCK++++  +  L  +ML + ++PTVVT+N L +G      +E   KL   M    
Sbjct: 539 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 598

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKL 176
           +    +TYN+ I   C    +    E++R +    C  G+      Y+ LI G CK   +
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGM----CAKGVVPDGNTYNILIKGHCKARNM 654

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           + AW L + +   G    V +YN +I GF    +  +A +LF  M  +G+  +   +N
Sbjct: 655 KEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 712



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 107/212 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +L+  M   G  P+A  Y+TL+D +C + E+ RA EL   M        VVT+N 
Sbjct: 514 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 573

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C +  +E+   L   ML KGI P   TYN+L       + +    +++  M    
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  + +TYN  I G CK   + EA  L R +      L + +Y+ LI G  K  K   A 
Sbjct: 634 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 693

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           ELF+ + R GL+ +   YNI      ++G+M+
Sbjct: 694 ELFEQMRREGLVADREIYNIFADINYDEGKME 725



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 1/191 (0%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE-IHQVEHALKLFDEMQHSDVAAETSTYN 129
           ++E+  L+ +ML+ G+  +V + N     L E +  ++ ALK+F E     V   T++YN
Sbjct: 198 LDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYN 257

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
                LC+ G +VEA +L   + +  C   + +YS +I+G C++G+L+   +L + +   
Sbjct: 258 IITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIK 317

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           GL PN  TYN +I   C  G++ +A  +  +M ++G+AP+ V + TL+ G  +    S  
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377

Query: 250 VELLHRMDERN 260
             L   M +R 
Sbjct: 378 YRLFDEMQKRK 388



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 120/245 (48%), Gaps = 7/245 (2%)

Query: 15  GVRPNAF--VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD-V 71
           G  P  F   +  L++     G +D AR+LF  M   G + +V + N  I+   +  D +
Sbjct: 179 GSDPRVFDIFFQVLVEA----GMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGI 234

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           + +L ++ E    G+     +YN + H L ++ +V  A +L  +M+      +  +Y+T 
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+G C+ G +    +L   +++   +     Y+ +I  LCK GK+  A  + + +   G+
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 354

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            P+ V Y  +I GFC  G +  A+ LF +M+ + ++P+ +T+  ++ G  +     +  +
Sbjct: 355 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414

Query: 252 LLHRM 256
           L H M
Sbjct: 415 LFHEM 419


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  176 bits (446), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 142/251 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA +L D MI+RG +P+ F ++T +  +C  G+++    L   M   G   ++VTY T
Sbjct: 513 MEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGT 572

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK KDV ++     E++  G+RP  V YN L  G      +  A+ + D M+H+ 
Sbjct: 573 IIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNG 632

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ +  +C  G + EA E+F    +   ELG+  Y+ +I G CKIGK++ A 
Sbjct: 633 IQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAV 692

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +    + PN +TY  +++ +C  G  ++A  LF +M + G+ P+ V++NTL+ GC
Sbjct: 693 MYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGC 752

Query: 241 IRNNETSKVVE 251
              +   K+VE
Sbjct: 753 CEVDSLDKIVE 763



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 117/237 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   RL+  M+ R ++PN  V +  I   C  G+ + A E++  +   G   N+ T N 
Sbjct: 408 LDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNA 467

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+  +++E+  +   M+  G+    +TYN +     +  ++E A++L D+M    
Sbjct: 468 LIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG 527

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+NTF+   C  G + +   L   ++    +  I  Y  +IDG CK   +  A 
Sbjct: 528 FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKAN 587

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +    L + GL PN V YN +I G+  +G +  A  +   M+  G+ P  +T+N+LM
Sbjct: 588 KYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLM 644



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 138/297 (46%), Gaps = 45/297 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L   M++  +RP+   +  LI+G            +   M+  G   N V YN 
Sbjct: 267 VEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQ 326

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C+     E+L L+ EM+SKGI+ TVVTYN +   L +  ++EHA ++ DEM  + 
Sbjct: 327 LIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAG 386

Query: 121 VAAETSTYNTF------------------------------------IDGLCKNGYIVEA 144
           +    S +N+                                     I  LCK G   EA
Sbjct: 387 MTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEA 446

Query: 145 AELFRTLRVLKCELG--IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           AE++    VL   LG  I   + LI GLC+   ++ A ++ +++   G+  + +TYNIMI
Sbjct: 447 AEIW--FLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMI 504

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNNETSKVVELLHRMDE 258
              C   +M++A  L  DM  +G  P+  TFNT +   C       KV ++LH +D+
Sbjct: 505 QFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYC----NLGKVEDILHLLDQ 557



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 1/243 (0%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVE 72
           RG  P+    + L++     G++D AR++F  M D N    +V TY  +I   C+  +++
Sbjct: 174 RGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEID 233

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            +  + +E+   GI+PTVVTYN L   L    +VE A +L   M    +     T+   I
Sbjct: 234 AAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILI 293

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           +GL +     E   + + +           Y+ LI   C+ G    A  LF  +   G+ 
Sbjct: 294 NGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIK 353

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
             VVTYN++    C +G+M+ A  +  +M   G+  +C  FN+++   +R      VV  
Sbjct: 354 QTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLR 413

Query: 253 LHR 255
           L R
Sbjct: 414 LIR 416



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 36/291 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA RL D M+ +G++     Y+ +    C  GE++ A ++   M + G   +   +N++
Sbjct: 338 SEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSV 397

Query: 62  INGY------------------------------------CKTKDVEESLNLYSEMLSKG 85
           +  +                                    CK    EE+  ++  +L KG
Sbjct: 398 VAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG 457

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           +   + T N L HGL + + ++ A K+   M  S V  +  TYN  I   CK   + EA 
Sbjct: 458 LGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAI 517

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L   +     +  +  ++  +   C +GK+E    L   +   GL P++VTY  +I G+
Sbjct: 518 QLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGY 577

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C    + KA+   +++   G+ PN V +N L+ G  RN   S  + +L  M
Sbjct: 578 CKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 36/278 (12%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
            V P+ + Y+ +I   C  GEID A  +   ++ +G    VVTYN L++  C++  VEE+
Sbjct: 211 AVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEA 270

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L   M+   +RP++VT+  L +GL    +      +  EM+   +      YN  I  
Sbjct: 271 FQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGW 330

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG---- 190
            C+ G+  EA  LF  +     +  +  Y+ +   LCK G++E A ++   +   G    
Sbjct: 331 HCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVH 390

Query: 191 --------------------------------LMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
                                           L PN       I   C  G+ ++A +++
Sbjct: 391 CSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIW 450

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +  KG+  N  T N L+ G  + N   +  ++L  M
Sbjct: 451 FLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAM 488



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 1/184 (0%)

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFI 132
           + + + E+ ++G  P++ T N L   L    Q++ A K+F EM+  + VA +  TY   I
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMI 223

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
             LC+ G I  A  +   L     +  +  Y+ L+D LC+ G++E A++L   +    L 
Sbjct: 224 KALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLR 283

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P++VT+ I+I+G     +  +   +  +ME  G+ PN V +N L+    R    S+ + L
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRL 343

Query: 253 LHRM 256
              M
Sbjct: 344 FDEM 347



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 60/117 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +    I + +      Y+ +I GFC  G+ID A   F  M       N +TY T
Sbjct: 653 VEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTT 712

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           L+  YCK  + EE+  L+ EM+S GI P  V+YNTL  G  E+  ++  ++   EM 
Sbjct: 713 LMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMS 769



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG--LMPNVV 196
           G +  AA+ F  L        I+  + L++ L   G+L+ A ++F  + R G  + P+V 
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEM-RDGNAVAPDVY 217

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY +MI   C  G++D A  +  ++E  G+ P  VT+N LM    R+    +  +L  RM
Sbjct: 218 TYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRM 277

Query: 257 DE 258
            E
Sbjct: 278 VE 279



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 47/83 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA      M  R +RPN   Y+TL+  +C  G  + A +LF  M  +G + + V+YNT
Sbjct: 688 IDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNT 747

Query: 61  LINGYCKTKDVEESLNLYSEMLS 83
           LI+G C+   +++ +   +EM S
Sbjct: 748 LISGCCEVDSLDKIVESPAEMSS 770


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 132/237 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+ LL+ MI  G +PN   Y +L+ G C  G++  A +LF  M   GC  + V YN 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K  D+ E+  L+ EML KG  PTV TYN+L  G     +      LF +M    
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+N  +DG CK G +VEA  LF  +R L C   + +Y+ LI G+C  GK   A 
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQ 282

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L + + R G+ P++V+YNI+I G+   G +D A  LF ++   G+ P+  +++T++
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339



 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 129/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G  PN + Y  L+   C     + AR +F  M   GC  NV +Y+ LI G C+ + 
Sbjct: 43  MLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E+  L +EM+  G +P VVTY +L  GL ++ +++ A+ LF  M +     +   YN 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG  K G + EA  LF  +    C   +  Y+ L+ G  + G+      LF+ + R G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +PN+ T+N ++ GFC  G M +AH LFL+M + G  P+ V++NTL+ G     +  +  
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQ 282

Query: 251 ELLHRM 256
            LL  M
Sbjct: 283 RLLREM 288



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 133/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +EA  +   M  +G  PN F YS LI G C   ++D A EL   M   G   NVVTY +
Sbjct: 68  FEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGS 127

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   ++E+++L+S M+ +G  P  V YN L  G  +   +  A +LF+EM    
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN+ + G  + G       LF+ +    C   I  ++ L+DG CK+G +  A 
Sbjct: 188 CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +  +G  P+VV+YN +I G C+ G+  +A  L  +M   GV P+ V++N L+ G 
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307

Query: 241 IRNNETSKVVELLHRMDE 258
            ++      ++L + + +
Sbjct: 308 SKSGALDHAIKLFYEIPK 325



 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 134/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA RL + M+++G  P  F Y++L+ GF   GE  R + LF  M   GC+ N+ T+N 
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK  D+ E+  L+ EM S G  P VV+YNTL  G+    +   A +L  EM  S 
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSG 292

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +YN  IDG  K+G +  A +LF  +     E    +YS +ID LC+ GK+  A+
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G  P+      ++ G C   ++ ++ +LF  M      P    +N LM   
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKL 412

Query: 241 IRNNETSKVVELLHRMDERN 260
            +   +  V E+ H + ER 
Sbjct: 413 CKAKRSDDVCEIFHELTERG 432



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 108/217 (49%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ L++    +G  D     +  M   GC+ N  TY  L+   C+ +  EE+ +++  M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           ++G  P V +Y+ L  GL    +V+ A +L +EM          TY + + GLCK G + 
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA +LF  +    C      Y+ LIDG  K G +  A+ LF+ +   G +P V TYN ++
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            GF   G+  +   LF DM  +G  PN  TFN L+ G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           H  ++YN L+    K+   +     Y++ML+ G  P   TY  L   L +  + E A  +
Sbjct: 15  HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           F  M     +    +Y+  I GLC+   + EAAEL   +     +  +  Y  L+ GLCK
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +GKL+ A +LF  +   G  P+ V YN++I GF   G M +A+ LF +M  KG  P   T
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 233 FNTLMLGCIRNNETSKVVELLHRM 256
           +N+L+ G  R  E  +V  L   M
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDM 218



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 103/215 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA RL   M   G  P+   Y+TLI G C  G+   A+ L   M  +G   ++V+YN 
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K+  ++ ++ L+ E+   G+ P   +Y+T+   L    +V  A  +F +M  + 
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A + +     + GLC+   + E+ ELF+ +   +C   I  Y+ L+  LCK  + +   
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVC 422

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           E+F  L   G  P+V    +++         D A 
Sbjct: 423 EIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%)

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           ++YN L   L +  + +H    +++M  +     T TY   +  LC+     EA  +FR 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C   + +YS LI GLC+  K++ A EL   +   G  PNVVTY  ++ G C  G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + +A DLF  M  +G  P+ V +N L+ G  +  +  +   L   M E+ 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 138/257 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++  MI  G  P+ F Y++LI  +CL  +++ A  +F  M   G + ++V + +LI
Sbjct: 305 QAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLI 364

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K++ ++++L  EM   G  P V T+ TL  G  +  +   A +LF  M      
Sbjct: 365 HGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQV 424

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T    +DGLCK   + EA  L + +     +L I  YS L+DG+C  GKL  AWEL
Sbjct: 425 PNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWEL 484

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SLP  GL  NV  Y IMI G C  G +DKA DL ++ME  G  PN  T+N  + G + 
Sbjct: 485 FSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLT 544

Query: 243 NNETSKVVELLHRMDER 259
             E ++ ++ L  M ++
Sbjct: 545 KKEIARSIKYLTIMRDK 561



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 130/293 (44%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M +     + + Y  LI+G C TG+   A      M+      NVV Y+T++
Sbjct: 165 QAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIM 224

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V E+LNL SEM  KG+RP +VTY  L  GL    + + A  L DEM    + 
Sbjct: 225 DGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMR 284

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELF-----------------------------RTLRV 153
            +    N  +D  CK G +++A  +                                +RV
Sbjct: 285 PDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 154 LKCELG------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
               +       I  ++ LI G CK   +  A  L + + ++G +P+V T+  +I GFC 
Sbjct: 345 FHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQ 404

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G+   A +LFL+M   G  PN  T   ++ G  + N  S+ V L   M++ N
Sbjct: 405 AGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSN 457



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 123/252 (48%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G+ P     +TLI+G C+ G + +A  L   M+      +V TY  LING C
Sbjct: 134 VLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLC 193

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           KT D   ++    +M  +  +P VV Y+T+  GL +   V  AL L  EM    V     
Sbjct: 194 KTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLV 253

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   I GLC  G   EA  L   +  +     ++  + L+D  CK GK+  A  +   +
Sbjct: 254 TYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFM 313

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  P+V TYN +IH +C   +M++A  +F  M ++G  P+ V F +L+ G  ++   
Sbjct: 314 ILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNI 373

Query: 247 SKVVELLHRMDE 258
           +K + LL  M +
Sbjct: 374 NKAMHLLEEMSK 385



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 126/255 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA R+  LM+ RG  P+  V+++LI G+C    I++A  L   M   G + +V T+ T
Sbjct: 338 MNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTT 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+      +  L+  M   G  P + T   +  GL + + +  A+ L   M+ S+
Sbjct: 398 LIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSN 457

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y+  +DG+C  G +  A ELF +L     ++ +  Y+ +I GLCK G L+ A 
Sbjct: 458 LDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAE 517

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L  ++   G +PN  TYN+ + G     ++ ++      M  KG + +  T   ++   
Sbjct: 518 DLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYL 577

Query: 241 IRNNETSKVVELLHR 255
             N   +K+ E L R
Sbjct: 578 STNEGDTKIREFLFR 592



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 7/241 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFC----LTGEIDRARELFVSMDINGCMHNVV 56
           +DEA  L   M +    P+   ++ L+         T  I   + +F S+ I     + +
Sbjct: 57  IDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEA---DTI 113

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           T N +IN  C+ K V    ++   M   G+ PTV+T  TL +GL     V  A+ L D M
Sbjct: 114 TLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHM 173

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +      +  TY   I+GLCK G  + A    R +     +  +  YS ++DGLCK G +
Sbjct: 174 EKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLV 233

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  L   +   G+ PN+VTY  +I G CN G+  +A  L  +M   G+ P+    N L
Sbjct: 234 SEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNIL 293

Query: 237 M 237
           +
Sbjct: 294 V 294



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 3/242 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  +    + +I+  C    +     +  +M   G    V+T  TLING C   +V ++
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQA 166

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L   M        V TY  L +GL +      A+    +M+  +       Y+T +DG
Sbjct: 167 VGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDG 226

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+G + EA  L   +        +  Y+CLI GLC  G+ + A  L   + ++G+ P+
Sbjct: 227 LCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPD 286

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM-LGCIRN--NETSKVVE 251
           +   NI++  FC +G++ +A  +   M   G  P+  T+N+L+ + C++N  NE  +V  
Sbjct: 287 LQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 252 LL 253
           L+
Sbjct: 347 LM 348



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 7/237 (2%)

Query: 30  FCLTGE---IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK-G 85
            C +G+   ID A +LF  M     + +V  +  L+    + K    +++L   M S  G
Sbjct: 48  LCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLG 107

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I    +T N + + L  +  V     +   M    +     T  T I+GLC  G + +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAV 167

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L   +  +   L +  Y  LI+GLCK G    A    + +      PNVV Y+ ++ G 
Sbjct: 168 GLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI---RNNETSKVVELLHRMDER 259
           C DG + +A +L  +M  KGV PN VT+  L+ G     R  E   +++ + +M  R
Sbjct: 228 CKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMR 284



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 9/186 (4%)

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
           +E  S G +  +   N  + G  ++  ++ AL LF  M           +   +  + + 
Sbjct: 32  TESHSNGTQLLISMRNLCWSG--KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRL 89

Query: 139 GYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            +   A  L + +      LGIEA     + +I+ LC++  +   + +  ++ ++GL P 
Sbjct: 90  KHYTTAISLVKHMF---SSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPT 146

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V+T   +I+G C  G + +A  L   ME      +  T+  L+ G  +  +T   V  L 
Sbjct: 147 VMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLR 206

Query: 255 RMDERN 260
           +M+ERN
Sbjct: 207 KMEERN 212


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 142/258 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   ++DLM+Q G RPN   +++L++G+CL G ++ A  L  +M   G   N   Y TL+
Sbjct: 456 EGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 515

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L ++ +ML KG++PT V YN + HGLF+  +   A K+F EM  S   
Sbjct: 516 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTT 575

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   + GLC+N    EA  L   L  +  +  I  ++ +I  + K+G+ + A EL
Sbjct: 576 VSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKEL 635

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P V TYN+MI     +   ++A +LF+ +E  G AP+    N ++   ++
Sbjct: 636 FAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLK 695

Query: 243 NNETSKVVELLHRMDERN 260
             E +K    L  +DE N
Sbjct: 696 KAEVAKASNYLSIIDENN 713



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 138/247 (55%), Gaps = 3/247 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+ P+   Y+TLIDGF   GE+D+A ELF  M       +VVTYN+LI+G CKTK+
Sbjct: 148 LLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKE 207

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + +S  +  +M+  GIRP   TYN+L +G       + ++++F EM  S +       N+
Sbjct: 208 MVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNS 267

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           FI  LC++  I EA ++F ++ +   +  I +YS L+ G    G       L   +   G
Sbjct: 268 FIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKG 327

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++PN   +NI+I+ +   G MDKA  +F DM+ KG+ P+ VTF T++    R     ++ 
Sbjct: 328 IVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR---IGRLD 384

Query: 251 ELLHRMD 257
           + LH+ +
Sbjct: 385 DALHKFN 391



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M+ +G +PN   YSTL+ G+   G       L   M   G + N   +N 
Sbjct: 278 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 337

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN Y +   +++++ ++ +M +KG+ P  VT+ T+   L  I +++ AL  F+ M    
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAE------------------------LFRTLRV--- 153
           V    + Y   I G C +G +V+A E                        LF+  RV   
Sbjct: 398 VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEG 457

Query: 154 -----LKCELG----IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                L  + G    +  ++ L++G C +G +E A+ L  ++  +G+ PN   Y  ++ G
Sbjct: 458 KDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 517

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +C +G++D A  +F DM  KGV P  V +N ++ G  +   T+   ++ H M E
Sbjct: 518 YCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 121/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   MI++ V P+   Y++LIDG C T E+ ++  +   M   G   N  TYN+
Sbjct: 173 VDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNS 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY      +ES+ ++ EM S G+ P VV  N+  H L   ++++ A  +FD M    
Sbjct: 233 LIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKG 292

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y+T + G    G       L   +           ++ LI+   + G ++ A 
Sbjct: 293 PKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAM 352

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G++P+ VT+  +I   C  G++D A   F  M   GV P+   +  L+ GC
Sbjct: 353 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGC 412

Query: 241 IRNNETSKVVELLHRM 256
             + E  K  EL+  M
Sbjct: 413 CNHGELVKAKELISEM 428



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  + + M  +G+ P+   ++T+I   C  G +D A   F  M   G   +   Y  
Sbjct: 348 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRC 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY-NTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G C   ++ ++  L SEM++K I P  V Y +++ + LF+  +V     + D M  +
Sbjct: 408 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQT 467

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  T+N+ ++G C  G + EA  L   +  +  E     Y  L+DG CK G+++ A
Sbjct: 468 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 527

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +F+ +   G+ P  V YNI++HG     +   A  +F +M   G   +  T+  ++ G
Sbjct: 528 LTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGG 587

Query: 240 CIRNNETSKVVELLHRM 256
             RNN T +   LL ++
Sbjct: 588 LCRNNCTDEANMLLEKL 604



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 125/245 (51%), Gaps = 6/245 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P  + Y+ LID +      + A  +F  +   G   +V +YNTLI+G+ K  +V+++  L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M+ + + P VVTYN+L  GL +  ++  + ++ ++M  + +     TYN+ I G   
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 138 NGYIVEAAELFRTLR---VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            G   E+  +F+ +    ++ C +   ++   I  LC+  +++ A ++F S+   G  PN
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSF---IHALCRHNRIKEAKDIFDSMVLKGPKPN 296

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +++Y+ ++HG+  +G     + L   M +KG+ PN   FN L+    R     K + +  
Sbjct: 297 IISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFE 356

Query: 255 RMDER 259
            M  +
Sbjct: 357 DMQNK 361



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 41/119 (34%)

Query: 179 AWELFQSLPR------VGLMPNVVTYNI-------------------------------- 200
           A ELF+ + R          P + TYNI                                
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 201 ---MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              +I GF  +G++DKA++LF  M  + V+P+ VT+N+L+ G  +  E  K   +L +M
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQM 218


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 142/258 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D + RL+  + ++   PN F ++ +ID  C  GE+  AR LF  M   GC+ +VVT+N+L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K  +++E   L  EM   G +  VVTYN L +   +  ++E A   F  M+   V
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A   T++TF+D  CK G + EA +LF  +RV    L    Y+CLIDG CK G+L+ A  
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + R G+  NVVTY +++ G C + ++ +A D+   ME  GV  N + + TL+ G  
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 242 RNNETSKVVELLHRMDER 259
            N  + K + LL  M  +
Sbjct: 410 MNKNSEKALGLLSEMKNK 427



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  +L++ M + G + +   Y+ LI+ FC  G ++ A   F +M   G M NVVT++T
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++ +CK   V E++ L+++M  +G+     TY  L  G  +  +++ A+ L DEM    
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           V     TY   +DGLCK   + EA ++ R +     + G+ A    Y+ LI G       
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMME----KAGVRANELLYTTLIHGHFMNKNS 414

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A  L   +   GL  ++  Y  +I G CN  ++D+A  L   M+  G+ PN + + T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 237 MLGCIRNNETSKVVELLHRM 256
           M  C ++ +  + + +L ++
Sbjct: 475 MDACFKSGKVPEAIAMLQKI 494



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 22/259 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LLD M+++GV  N   Y+ L+DG C   ++  A ++   M+  G   N + Y T
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+   K+ E++L L SEM +KG+   +  Y  L  GL  +H+++ A  L  +M  S 
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 121 VAAETSTYNTFIDGLCK----------------------NGYIVEAAELFRTLRVLKCEL 158
           +      Y T +D   K                      NG + EA +LF  +      L
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSL 523

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               Y+ L+DG  K G L  A+ L   +   GL  ++  Y   I GFCN   M +A ++F
Sbjct: 524 DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVF 583

Query: 219 LDMEAKGVAPNCVTFNTLM 237
            +M   G+AP+   +N L+
Sbjct: 584 SEMIGHGIAPDRAVYNCLI 602



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 106/229 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A      M + GV  N   +ST +D FC  G +  A +LF  M + G   N  TY  
Sbjct: 274 METAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTC 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +++++ L  EM+ +G+   VVTY  L  GL +  +V  A  +   M+ + 
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A    Y T I G   N    +A  L   ++    EL I  Y  LI GLC + KL+ A 
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L   +   GL PN + Y  M+      G++ +A  +   +   G  PN
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN 502



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L + M+ +G+  +  VY+ L+DG+   G +  A  L   M  +G   ++  Y  
Sbjct: 506 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 565

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
            I+G+C    + E+  ++SEM+  GI P    YN L   + EI ++
Sbjct: 566 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQIPEIREL 611


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 146/255 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + +L+I  G RP    +++LIDG+CL G++++A  +  +M   G   +VVTYNTL+
Sbjct: 563 DAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLV 622

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK+  +++ L L+ EML K ++PT VTY+ +  GLF   +   A K+F EM  S  A
Sbjct: 623 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTA 682

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   + GLC+N    EA  LF  L  + C+  I   + +I+ L K+ + E A +L
Sbjct: 683 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDL 742

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PNV TY +MIH    +G +++A  +F  ME  G AP+    N ++   ++
Sbjct: 743 FAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 802

Query: 243 NNETSKVVELLHRMD 257
             +  K    + ++D
Sbjct: 803 KGDIVKAGYYMSKVD 817



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  +   M  +GVRP+   YSTLI  FC  G +  A E F  M   G   N V Y++
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHS 514

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G+C   D+ ++  L SEM+SKGI RP +V ++++ H L    +V  A  +F+ + H 
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHI 574

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  T+N+ IDG C  G + +A  +   +  +  E  +  Y+ L+ G CK GK++  
Sbjct: 575 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG 634

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+ +    + P  VTY+I++ G  + G+   A  +F +M   G A +  T+  L+ G
Sbjct: 635 LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 694

Query: 240 CIRNNETSKVVELLHRM 256
             RN+ T + + L H++
Sbjct: 695 LCRNDLTDEAITLFHKL 711



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 130/239 (54%), Gaps = 3/239 (1%)

Query: 2   DEA-SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTY 58
           DEA   LL  M   G  PNA  Y+T+I   C       A ++   M   G  C  +VV++
Sbjct: 208 DEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSF 267

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           NT+I+G+ K  +V ++ NL +EM+ KG+ P VVTYN++   L +   ++ A  +  +M  
Sbjct: 268 NTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVD 327

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             V  +  TY   I G   +G+  E+A++FR +       GI  ++  +  LCK G+ + 
Sbjct: 328 KGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKD 387

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A E+FQ +   G MP++V+Y+I++HG+  +G+    ++LF  M  KG+  NC  FN L+
Sbjct: 388 AEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILI 446



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 132/256 (51%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGVR--PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           EA  ++  M + G R  P+   ++T+I GF   GE+ +A  L   M   G   +VVTYN+
Sbjct: 245 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNS 304

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++  +  +M+ KG+ P  +TY  + HG       + + K+F +M    
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+N+F+  LCK+G   +A E+F+ +        + +YS L+ G    G+     
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF S+   G++ N   +NI+I      G MD+A  +F +M+ +GV P+ VT++TL+   
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484

Query: 241 IRNNETSKVVELLHRM 256
            R    +  +E   +M
Sbjct: 485 CRMGRLADAMEKFSQM 500



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 144/325 (44%), Gaps = 71/325 (21%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E++++   M  +G+ P    +++ +   C  G    A E+F  M   G M ++V+Y+ L+
Sbjct: 352 ESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILL 411

Query: 63  NGY-----------------------------------CKTKDVEESLNLYSEMLSKGIR 87
           +GY                                    K   ++E++ +++EM  +G+R
Sbjct: 412 HGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVR 471

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P VVTY+TL      + ++  A++ F +M    +   T  Y++ I G C +G +V+A EL
Sbjct: 472 PDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKEL 531

Query: 148 ----------------FRTLRVLKCELG--------------------IEAYSCLIDGLC 171
                           F ++    C  G                    I  ++ LIDG C
Sbjct: 532 VSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYC 591

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
            +GK+E A+ +  ++  VG+ P+VVTYN ++ G+C  G++D    LF +M  K V P  V
Sbjct: 592 LVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV 651

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T++ ++ G      TS   ++ H M
Sbjct: 652 TYSIVLDGLFHAGRTSAAKKMFHEM 676



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 36/273 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L++ M+Q+GV P+   Y++++D  C    +D+A  +   M   G   + +TY  
Sbjct: 280 VSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTA 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT------------------------- 95
           +I+GY  +   +ES  ++ +M SKG+ P +VT+N+                         
Sbjct: 340 IIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKG 399

Query: 96  ----------LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                     L HG     +      LF  M    + A    +N  I    K G + EA 
Sbjct: 400 HMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAM 459

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +F  ++       +  YS LI   C++G+L  A E F  +  +GL PN V Y+ +IHGF
Sbjct: 460 LVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGF 519

Query: 206 CNDGQMDKAHDLFLDMEAKGVA-PNCVTFNTLM 237
           C  G + KA +L  +M +KG+  PN V F++++
Sbjct: 520 CMHGDLVKAKELVSEMMSKGIPRPNIVFFSSII 552



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 3/253 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFV-SMDINGCMHNVVTYNTLINGYCKTK 69
           +++ G+R      +T +   C     D A ++ +  M   GC+ N ++YNT+I   C   
Sbjct: 182 LLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDS 241

Query: 70  DVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             +E+L++   M  +G R  P VV++NT+ HG F+  +V  A  L +EM    V  +  T
Sbjct: 242 RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVT 301

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN+ +D LCK   + +A  + R +     E     Y+ +I G    G  + + ++F+ + 
Sbjct: 302 YNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMT 361

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+P +VT+N  +   C  G+   A ++F  M  KG  P+ V+++ L+ G       +
Sbjct: 362 SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFA 421

Query: 248 KVVELLHRMDERN 260
            +  L H M ++ 
Sbjct: 422 DMNNLFHSMADKG 434



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 3/210 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK-L 112
           +V TY  L++  C+ +  +     ++ +L  G+R   +  NT    L    + + A+  L
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL--KCELGIEAYSCLIDGL 170
              M          +YNT I  LC +    EA ++ + +     +C   + +++ +I G 
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K G++  A  L   + + G+ P+VVTYN ++   C    MDKA  +   M  KGV P+ 
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +T+  ++ G   +    +  ++  +M  + 
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 74/212 (34%), Gaps = 53/212 (25%)

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL--------CKNGYIVEAAELFRT 150
           G F      H   LFDE+            N F+  L        C NG  +  A   R 
Sbjct: 86  GTFSTDDAHH---LFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRI 142

Query: 151 LR----VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL--------------- 191
            R         L +  Y  L+D  C+  + +     F  L R GL               
Sbjct: 143 CREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLC 202

Query: 192 ---------------------MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAP 228
                                +PN ++YN +I   C D +  +A D+   M  +G   +P
Sbjct: 203 HAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSP 262

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + V+FNT++ G  +  E SK   L++ M ++ 
Sbjct: 263 DVVSFNTVIHGFFKQGEVSKACNLINEMVQKG 294



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 59/138 (42%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   +     + +  + +T+I+        + A +LF ++  +G + NV TY  +
Sbjct: 702 DEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVM 761

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+   K   VEE+  ++S M   G  P+    N +   L +   +  A     ++  + +
Sbjct: 762 IHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTII 821

Query: 122 AAETSTYNTFIDGLCKNG 139
           + E ST +  +      G
Sbjct: 822 SLEASTTSLLMSLFSSKG 839


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 148/260 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M+ +G++P    Y++L+DG+ L  ++++A+ +F +M   G   ++ +Y+ 
Sbjct: 193 VKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSI 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K ++E++ L  EM  K I P VVTY++L  GL +  ++ +ALKL DEM    
Sbjct: 253 LINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ +D LCKN  +  A  L   ++    +  +  Y+ LI GLC+ GKLE A 
Sbjct: 313 QPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDAR 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ L   G   NV TY +MI GFC+ G  D+A  L   ME  G  PN  T+  ++L  
Sbjct: 373 KVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSL 432

Query: 241 IRNNETSKVVELLHRMDERN 260
            + +E     +LL  M E N
Sbjct: 433 FKKDENEMAEKLLCEMIETN 452



 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 138/258 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + MI   + P+ + ++ L+DGFC  G +  A+ +   M I G    VVTYN+
Sbjct: 158 LKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNS 217

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY   K V ++ ++++ M   G+ P + +Y+ L +G  +I  ++ A++L  EM H  
Sbjct: 218 LMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ 277

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ IDGLCK+G I  A +L   +        I  YS ++D LCK  +++ A 
Sbjct: 278 IIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAI 337

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+ PN+ TY I+I G C  G+++ A  +F D+  KG   N  T+  ++ G 
Sbjct: 338 ALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGF 397

Query: 241 IRNNETSKVVELLHRMDE 258
                  + + LL +M++
Sbjct: 398 CDKGLFDEALTLLSKMED 415



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 134/249 (53%), Gaps = 10/249 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI----------DRARELFVSMDING 50
           +  A  +L  +++ G +PN    +TLI G CL G+I            A +LF  M +  
Sbjct: 113 IPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILEN 172

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
              +V T+  L++G+CK   V+E+ N+ + M+ +GI+P VVTYN+L  G F + QV  A 
Sbjct: 173 INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAK 232

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
            +F+ M    V+ +  +Y+  I+G CK   + EA EL + +   +    +  YS LIDGL
Sbjct: 233 SIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGL 292

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK GK+  A +L   +   G  PN+VTY+ ++   C + Q+D A  L   M+ +G+ PN 
Sbjct: 293 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNM 352

Query: 231 VTFNTLMLG 239
            T+  L+ G
Sbjct: 353 YTYTILIKG 361



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 143/269 (53%), Gaps = 10/269 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + ++Q+   P    ++ ++     +        L   M+  G   N+V  N 
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF---EIH-------QVEHAL 110
           LIN +C+   +  + ++ +++L  G +P  +T NTL  GL    +IH       +++ A+
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
            LF++M   ++  +  T+   +DG CK G + EA  +   + +   + G+  Y+ L+DG 
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
             + ++  A  +F ++ ++G+ P++ +Y+I+I+GFC    MD+A +L  +M  K + PN 
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDER 259
           VT+++L+ G  ++ + S  ++L+  M +R
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDR 311



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 10/215 (4%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N + Y +    +    DV+++++L++ +L +   P  + +N +   L +       L L 
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK- 172
            +M+   +       N  I+  C+ G+I  A  +   +  +  +      + LI GLC  
Sbjct: 86  QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145

Query: 173 ---------IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
                    +GKL+ A +LF  +    + P+V T+ I++ GFC +G++ +A ++   M  
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +G+ P  VT+N+LM G     + +K   + + M +
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQ 240



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 71/139 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M  +G++PN + Y+ LI G C +G+++ AR++F  + + G   NV TY  
Sbjct: 333 VDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G+C     +E+L L S+M   G  P   TY  +   LF+  + E A KL  EM  ++
Sbjct: 393 MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETN 452

Query: 121 VAAETSTYNTFIDGLCKNG 139
                +  N  I  +   G
Sbjct: 453 FDGRVALTNDLIASIWVTG 471


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 142/258 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D + RL+  + ++   PN F ++ +ID  C  GE+  AR LF  M   GC+ +VVT+N+L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K  +++E   L  EM   G +  VVTYN L +   +  ++E A   F  M+   V
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A   T++TF+D  CK G + EA +LF  +RV    L    Y+CLIDG CK G+L+ A  
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + R G+  NVVTY +++ G C + ++ +A D+   ME  GV  N + + TL+ G  
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 242 RNNETSKVVELLHRMDER 259
            N  + K + LL  M  +
Sbjct: 410 MNKNSEKALGLLSEMKNK 427



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 122/254 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M  RG+  N F Y+ LIDG C  G +D A  L   M   G   NVVTY  L+
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK + V E+ ++   M   G+R   + Y TL HG F     E AL L  EM++  + 
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + S Y   I GLC    + EA  L   +     E     Y+ ++D   K GK+  A  +
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q +   G  PNV+TY  +I G C  G +D+A   F  M   G+ PN   +  L+ G  +
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550

Query: 243 NNETSKVVELLHRM 256
           N   ++ V+L + M
Sbjct: 551 NGCLNEAVQLFNEM 564



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LLD M+++GV  N   Y+ L+DG C   ++  A ++   M+  G   N + Y T
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+   K+ E++L L SEM +KG+   +  Y  L  GL  +H+++ A  L  +M  S 
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y T +D   K+G + EA  + + +     +  +  Y  LIDGLCK G ++ A 
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +  +GL PNV  Y  ++ G C +G +++A  LF +M  KG++ + V +  L+ G 
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583

Query: 241 IRNNETSKVVELLHRM 256
           ++         L  +M
Sbjct: 584 LKQGNLHDAFALKAKM 599



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  +L++ M + G + +   Y+ LI+ FC  G ++ A   F +M   G M NVVT++T
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++ +CK   V E++ L+++M  +G+     TY  L  G  +  +++ A+ L DEM    
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           V     TY   +DGLCK   + EA ++ R +     + G+ A    Y+ LI G       
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMME----KAGVRANELLYTTLIHGHFMNKNS 414

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A  L   +   GL  ++  Y  +I G CN  ++D+A  L   M+  G+ PN + + T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 237 MLGCIRNNETSKVVELLHRM 256
           M  C ++ +  + + +L ++
Sbjct: 475 MDACFKSGKVPEAIAMLQKI 494



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 121/236 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  LL  M  +G+  +  +Y  LI G C   ++D A+ L   MD +G   N + Y T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   K+  V E++ +  ++L  G +P V+TY  L  GL +   ++ A+  F++M+   +
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 Y   +DGLCKNG + EA +LF  +      L    Y+ L+DG  K G L  A+ 
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L   +   GL  ++  Y   I GFCN   M +A ++F +M   G+AP+   +N L+
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 2/235 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M + G+ PN  +Y+T++D    +G++  A  +   +  +G   NV+TY  
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   ++E+++ +++M   G+ P V  Y  L  GL +   +  A++LF+EM H  
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG 568

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   Y   +DG  K G + +A  L   +     +L +  Y+C I G C +  +  A 
Sbjct: 569 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 628

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           E+F  +   G+ P+   YN +I  +   G +++A  L  +ME   V P+C   +T
Sbjct: 629 EVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER--VLPSCTDSDT 681


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 142/258 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D + RL+  + ++   PN F ++ +ID  C  GE+  AR LF  M   GC+ +VVT+N+L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K  +++E   L  EM   G +  VVTYN L +   +  ++E A   F  M+   V
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A   T++TF+D  CK G + EA +LF  +RV    L    Y+CLIDG CK G+L+ A  
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + R G+  NVVTY +++ G C + ++ +A D+   ME  GV  N + + TL+ G  
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 242 RNNETSKVVELLHRMDER 259
            N  + K + LL  M  +
Sbjct: 410 MNKNSEKALGLLSEMKNK 427



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 122/254 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M  RG+  N F Y+ LIDG C  G +D A  L   M   G   NVVTY  L+
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK + V E+ ++   M   G+R   + Y TL HG F     E AL L  EM++  + 
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + S Y   I GLC    + EA  L   +     E     Y+ ++D   K GK+  A  +
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q +   G  PNV+TY  +I G C  G +D+A   F  M   G+ PN   +  L+ G  +
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550

Query: 243 NNETSKVVELLHRM 256
           N   ++ V+L + M
Sbjct: 551 NGCLNEAVQLFNEM 564



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LLD M+++GV  N   Y+ L+DG C   ++  A ++   M+  G   N + Y T
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+   K+ E++L L SEM +KG+   +  Y  L  GL  +H+++ A  L  +M  S 
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y T +D   K+G + EA  + + +     +  +  Y  LIDGLCK G ++ A 
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +  +GL PNV  Y  ++ G C +G +++A  LF +M  KG++ + V +  L+ G 
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583

Query: 241 IRNNETSKVVELLHRM 256
           ++         L  +M
Sbjct: 584 LKQGNLHDAFALKAKM 599



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  +L++ M + G + +   Y+ LI+ FC  G ++ A   F +M   G M NVVT++T
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++ +CK   V E++ L+++M  +G+     TY  L  G  +  +++ A+ L DEM    
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           V     TY   +DGLCK   + EA ++ R +     + G+ A    Y+ LI G       
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMME----KAGVRANELLYTTLIHGHFMNKNS 414

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A  L   +   GL  ++  Y  +I G CN  ++D+A  L   M+  G+ PN + + T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 237 MLGCIRNNETSKVVELLHRM 256
           M  C ++ +  + + +L ++
Sbjct: 475 MDACFKSGKVPEAIAMLQKI 494



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 121/236 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  LL  M  +G+  +  +Y  LI G C   ++D A+ L   MD +G   N + Y T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   K+  V E++ +  ++L  G +P V+TY  L  GL +   ++ A+  F++M+   +
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 Y   +DGLCKNG + EA +LF  +      L    Y+ L+DG  K G L  A+ 
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L   +   GL  ++  Y   I GFCN   M +A ++F +M   G+AP+   +N L+
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 2/235 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M + G+ PN  +Y+T++D    +G++  A  +   +  +G   NV+TY  
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   ++E+++ +++M   G+ P V  Y  L  GL +   +  A++LF+EM H  
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG 568

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   Y   +DG  K G + +A  L   +     +L +  Y+C I G C +  +  A 
Sbjct: 569 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 628

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           E+F  +   G+ P+   YN +I  +   G +++A  L  +ME   V P+C   +T
Sbjct: 629 EVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER--VLPSCTDSDT 681


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 134/242 (55%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN F ++ +ID  C  GE+  AR LFV M   GC  +VVTYN+LI+GY K  ++EE   L
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            SEM   G    VVTYN L +   +   +E A   F EM+   V A   T +TF+D  CK
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G + EA +LF  +RV         Y+ L+DG CK G+L+ A  L   +   GL+PNVVT
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y +M+ G C +G++  A D+   ME  GV  N + + TL+ G   N  + + ++LL+ M 
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMK 436

Query: 258 ER 259
            +
Sbjct: 437 NK 438



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 127/257 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M  RG+ PN F Y++L+DG C  G +D A  L   M   G + NVVTY  ++
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V  + ++ S M   G++   + Y TL HG F     E AL L +EM++  + 
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + S Y T I GLCK   + EA  L   +           Y+ ++D   K GK   A  L
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +P  GL PNVVTY  +I G C  G + +A   F  M   G+ PN   + TL+ G  +
Sbjct: 502 LHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCK 561

Query: 243 NNETSKVVELLHRMDER 259
               SK V L++ M ++
Sbjct: 562 IGSLSKAVHLMNEMVDK 578



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 132/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LLD M+ +G+ PN   Y+ ++DG C  G++  A ++   M+  G   N + Y T
Sbjct: 355 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTT 414

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+   K+ E +L+L +EM +KG+   V  Y TL  GL ++ +++ A  L  +M    
Sbjct: 415 LIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCG 474

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T  Y T +D   K G   EA  L   +     +  +  Y  LIDGLCK G +  A 
Sbjct: 475 LRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAI 534

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +  +GL PNV  Y  +I GFC  G + KA  L  +M  KG++ + V + +L+ G 
Sbjct: 535 SHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGH 594

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  +      L  +M E
Sbjct: 595 MKQGDLQGAFALKAKMIE 612



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   L+  M + G   +   Y+ LI+ F   G I++A   F  M   G M NVVT +T
Sbjct: 250 LEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLST 309

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++ +CK   V E++ L+++M  +G+ P   TY +L  G  +  +++ A+ L DEM H  
Sbjct: 310 FVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 369

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   +DGLCK G +  A ++   +     +     Y+ LI G       E A 
Sbjct: 370 LVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERAL 429

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+  +V  Y  +I G C   ++D+A  L   M+  G+ PN V + T+M   
Sbjct: 430 DLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAF 489

Query: 241 IRNNETSKVVELLHRMDE 258
            +  + S+ V LLH++ +
Sbjct: 490 FKAGKESEAVALLHKIPD 507



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 121/269 (44%), Gaps = 35/269 (13%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L LM + GV+ N  +Y+TLI G  +    +RA +L   M   G   +V  Y TLI 
Sbjct: 393 ADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIW 452

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK + ++E+ +L  +M   G+RP  V Y T+    F+  +   A+ L  ++  S +  
Sbjct: 453 GLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQP 512

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   IDGLCK G I EA   F  +R L  +  ++ Y+ LIDG CKIG L  A  L 
Sbjct: 513 NVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLM 572

Query: 184 Q-------SLPRV----------------------------GLMPNVVTYNIMIHGFCND 208
                   SL +V                            GL  ++  Y   I GFCN 
Sbjct: 573 NEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNM 632

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             M +A  +  +M   G+ P+   +N L+
Sbjct: 633 NMMQEARGVLSEMIGTGITPDKTAYNCLI 661



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 111/223 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M   G+RPN  +Y+T++D F   G+   A  L   +  +G   NVVTY  
Sbjct: 460 LDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCA 519

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   + E+++ + +M   G+ P V  Y TL  G  +I  +  A+ L +EM    
Sbjct: 520 LIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKG 579

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   Y + IDG  K G +  A  L   +     +L +  Y+C I G C +  ++ A 
Sbjct: 580 MSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEAR 639

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
            +   +   G+ P+   YN +I  +   G M++A  L  +ME+
Sbjct: 640 GVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 4/202 (1%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           ++TL++       +++++   + +    + P   T N +   L    Q     +LF+ + 
Sbjct: 136 FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP 195

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             +V     T+N  ID LCK G +VEA  LF  ++ + C   +  Y+ LIDG  K G+LE
Sbjct: 196 APNVF----TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELE 251

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               L   + + G   +VVTYN +I+ F   G ++KA+  F +M+  GV  N VT +T +
Sbjct: 252 EVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFV 311

Query: 238 LGCIRNNETSKVVELLHRMDER 259
               +     + ++L  +M  R
Sbjct: 312 DAFCKEGLVREAMKLFAQMRVR 333


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 144/258 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + +S L   + ++   PN F ++ +ID  C  G++  AR L   M   GC  +VVTYN+L
Sbjct: 176 ERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSL 235

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K  ++EE   L  EM   G RP VVTYN L +   +  ++E A   F EM+   V
Sbjct: 236 IDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGV 295

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A   T++TF+D  CKNG + EA +LF  +R+   +     Y+CL+DG CK G+L+ A  
Sbjct: 296 MANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALV 355

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + + G+  NVVTY +++ G C +G++ +A D+F  ME  G+  N + + TL+ G  
Sbjct: 356 LTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHF 415

Query: 242 RNNETSKVVELLHRMDER 259
               + + + LL  M ++
Sbjct: 416 VYKNSERALSLLSEMKDK 433



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 134/260 (51%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L+  M   G RP+   Y+ L++ FC  G ++RA   F  M   G M NVVT++T
Sbjct: 245 LEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFST 304

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++ +CK   V E++ L+++M  KG++P  VTY  L  G  +  +++ AL L +EM    
Sbjct: 305 FVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQG 364

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           V     TY   +DGLCK G + EA ++FR +       GI A    Y+ LI G       
Sbjct: 365 VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLME----RAGIRANELLYTTLIHGHFVYKNS 420

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A  L   +   G+  +V  Y  +I G CN  ++D+A  L   M+  G+ PN V +  +
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNI 480

Query: 237 MLGCIRNNETSKVVELLHRM 256
           M  C +  + S+ + LL +M
Sbjct: 481 MDACFKARKESEAIALLQKM 500



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 127/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + M+Q+GV  N   Y+ L+DG C  G++  A ++F  M+  G   N + Y T
Sbjct: 350 LDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTT 409

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+   K+ E +L+L SEM  KG+   V  Y  L  GL  + +++ A  L ++M    
Sbjct: 410 LIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y   +D   K     EA  L + +        I  Y  L+DGLCK G ++ A 
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI 529

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +  +GL PNV  Y  ++ G C +G++DKA  L  +M  KG++ + V   +LM G 
Sbjct: 530 SHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGH 589

Query: 241 IRNNETSKVVELLHRM 256
           ++         L  +M
Sbjct: 590 LKQGNLQDAFALKAKM 605



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 116/223 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL+ M + G++PN  +Y+ ++D      +   A  L   M  +G   N+VTY  
Sbjct: 455 LDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCA 514

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   ++E+++ +++M+  G+ P V  Y  L  GL +  +++ A+ L DEM    
Sbjct: 515 LVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKG 574

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +     + +DG  K G + +A  L   +     +L +  Y+C + G C +  ++ A 
Sbjct: 575 MSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAR 634

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           E+   +   G+ P+ V YN +I+     G M++A  L  +ME+
Sbjct: 635 EVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)

Query: 104 HQVEHALKLFDEMQHSDVA------AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           H    A  L D +  + +A      A  S  +T +  L   G + +A      +R L+  
Sbjct: 101 HHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDAVLALARVRELRVP 160

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
                 + ++  L +    E AW LF+ LP     PNV T+NIMI   C +G + +A  L
Sbjct: 161 PNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTFNIMIDFLCKEGDLAEARAL 216

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              M+A G +P+ VT+N+L+ G  +  E  +V +L+  M
Sbjct: 217 LARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM 255


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D  I  G +P+   Y TL++G C  G    A  L  SM    C  NV+ YNT+I
Sbjct: 200 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 259

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+ NL+SEM++KGI P + TYN+L H L  + + +H   L +EM +S + 
Sbjct: 260 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 319

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                ++T +D LCK G I  A ++   +     E  +  Y+ L+DG C   +++ A ++
Sbjct: 320 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 379

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G +PNV +YNI+I+G+C   +MDKA  L   M  +G+  + VT+NTL+ G   
Sbjct: 380 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 439

Query: 243 NNETSKVVELLHRM 256
                  + L H M
Sbjct: 440 VGRLQHAIALFHEM 453



 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 114/183 (62%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  ++D+MI+RGV P+   Y+ L+DG CL  E+D A ++F +M   GC+ NV +YN LIN
Sbjct: 341 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 400

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+ + +++++ L  +M  +G+    VTYNTL HGL  + +++HA+ LF EM  S    
Sbjct: 401 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 460

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY   +D LCKN ++ EA  L + +     +  I  Y+  IDG+C+ G+LE A +LF
Sbjct: 461 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 520

Query: 184 QSL 186
            +L
Sbjct: 521 SNL 523



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 132/262 (50%), Gaps = 7/262 (2%)

Query: 1   MDEASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           M   S +L L  Q    G+ P+ +  + LI+ FC    +  A  +   +   GC  +  T
Sbjct: 125 MKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTT 184

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +NTLI G C    + E+L+L+ + + +G +P VVTY TL +GL ++     A++L   M 
Sbjct: 185 FNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMV 244

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             +       YNT ID LCK+  + EA  LF  +        I  Y+ LI  LC + + +
Sbjct: 245 QKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWK 304

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               L   +    +MPNVV ++ ++   C +G +  AHD+   M  +GV P+ VT+  LM
Sbjct: 305 HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 364

Query: 238 LG-CIRN--NETSKVVE-LLHR 255
            G C+R+  +E  KV + ++H+
Sbjct: 365 DGHCLRSEMDEAVKVFDTMVHK 386



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 121/225 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
             + LL+ M+   + PN  V+ST++D  C  G I  A ++   M   G   +VVTY  L+
Sbjct: 305 HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 364

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C   +++E++ ++  M+ KG  P V +YN L +G  +I +++ A+ L ++M    + 
Sbjct: 365 DGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI 424

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+T TYNT I GLC  G +  A  LF  +        +  Y  L+D LCK   L  A  L
Sbjct: 425 ADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL 484

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            +++    L  +++ YNI I G C  G+++ A DLF ++  +G A
Sbjct: 485 LKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 121/255 (47%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   MI +G+ P+ F Y++LI   C   E      L   M  +  M NVV ++T++
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   +  + ++   M+ +G+ P VVTY  L  G     +++ A+K+FD M H    
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               +YN  I+G C+   + +A  L   + +         Y+ LI GLC +G+L+ A  L
Sbjct: 390 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 449

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G +P++VTY I++   C +  + +A  L   +E   +  + + +N  + G  R
Sbjct: 450 FHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCR 509

Query: 243 NNETSKVVELLHRMD 257
             E     +L   + 
Sbjct: 510 AGELEAARDLFSNLS 524



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 113/237 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P+   ++ L+              L   MD  G   +V T N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C  + +  + ++ +++L  G +P   T+NTL  GL    ++  AL LFD+     
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T ++GLCK G    A  L R++    C   + AY+ +ID LCK  ++  A+
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF  +   G+ P++ TYN +IH  CN  +      L  +M    + PN V F+T++
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 87/151 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++ D M+ +G  PN   Y+ LI+G+C    +D+A  L   M + G + + VTYNT
Sbjct: 373 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 432

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++ ++ L+ EM++ G  P +VTY  L   L + H +  A+ L   ++ S+
Sbjct: 433 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 492

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           + A+   YN  IDG+C+ G +  A +LF  L
Sbjct: 493 LDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 81/186 (43%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++L+ ++ ML     P+ V +  L   + ++      L L  +M    +  +  T N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+  C    +  A  +   L  L C+     ++ LI GLC  GK+  A  LF      G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+VVTY  +++G C  G    A  L   M  K   PN + +NT++    ++ + ++  
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 251 ELLHRM 256
            L   M
Sbjct: 273 NLFSEM 278



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 70/155 (45%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           ++ AL  F+ M H      T  +   +  + K  +      L   +        +   + 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI+  C + +L  A+ +   L ++G  P+  T+N +I G C +G++ +A  LF     +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             P+ VT+ TLM G  +   TS  + LL  M ++N
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN 247



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  LL+ M  +G+  +   Y+TLI G C  G +  A  LF  M  +G + ++VTY  
Sbjct: 408 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 467

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   + E++ L   +    +   ++ YN    G+    ++E A  LF  +    
Sbjct: 468 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527

Query: 121 VAA 123
            AA
Sbjct: 528 FAA 530


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 144/256 (56%), Gaps = 4/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   MI+R V PN F Y++LI+GFC+ G +  A+ +F  M   GC  +VVTYNTLI
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK+K VE+ + L+ EM  +G+     TYNTL HG  +  ++  A K+F+ M    V+
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  +D LC NG I +A  +   L+  + ++ I  Y+ +I GLC+  KL+ AW L
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+SL R G+ P+ + Y  MI G C  G   +A  L   M+  G  P+   ++  +    R
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL----R 507

Query: 243 NNETSKVVELLHRMDE 258
           ++ TS   EL+    E
Sbjct: 508 DHYTSLSAELIKAAHE 523



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 4/258 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+RLL  M++R + PN   ++ LID F   G +  AR L+  M     + NV TYN+LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    + ++  ++  M+SKG  P VVTYNTL  G  +  +VE  +KLF EM +  + 
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG--IEAYSCLIDGLCKIGKLETAW 180
            +  TYNT I G C+ G +  A ++F   R++ C +   I  Y+ L+D LC  GK+E A 
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + L +  +  +++TYNI+I G C   ++ +A  LF  +  KGV P+ + + T++ G 
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474

Query: 241 IRNNETSKVVELLHRMDE 258
            R     +  +L  RM E
Sbjct: 475 CRKGLQREADKLCRRMKE 492



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 1/242 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M   G  PN  +Y+T+I+G C   +++ A E+F  M+  G   + VTYNTLI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G   +    ++  L  +M+ + I P V+ +  L     +   +  A  L+ EM    V 
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I+G C +G + +A  +F  +    C   +  Y+ LI G CK  ++E   +L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   GL+ +  TYN +IHG+C  G+++ A  +F  M   GV+P+ VT+N ++L C+ 
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN-ILLDCLC 405

Query: 243 NN 244
           NN
Sbjct: 406 NN 407



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 126/246 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G RP+     +L++GFC       A  L  SMD  G + NVV YNT+ING CK +D
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +L ++  M  KGIR   VTYNTL  GL    +   A +L  +M    +      +  
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID   K G ++EA  L++ +        +  Y+ LI+G C  G L  A  +F  +   G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+VVTYN +I GFC   +++    LF +M  +G+  +  T+NTL+ G  +  + +   
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379

Query: 251 ELLHRM 256
           ++ +RM
Sbjct: 380 KVFNRM 385



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 129/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + ++ LI  FC    +  A  L   M   G   ++VT  +L+NG+C+    +E+
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L   M   G  P VV YNT+ +GL +   + +AL++F  M+   + A+  TYNT I G
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L  +G   +AA L R +   K +  +  ++ LID   K G L  A  L++ + R  ++PN
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYN +I+GFC  G +  A  +F  M +KG  P+ VT+NTL+ G  ++      ++L  
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348

Query: 255 RM 256
            M
Sbjct: 349 EM 350



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 109/199 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + DLM+ +G  P+   Y+TLI GFC +  ++   +LF  M   G + +  TYNT
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC+   +  +  +++ M+  G+ P +VTYN L   L    ++E AL + +++Q S+
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I GLC+   + EA  LFR+L     +    AY  +I GLC+ G    A 
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484

Query: 181 ELFQSLPRVGLMPNVVTYN 199
           +L + +   G MP+   Y+
Sbjct: 485 KLCRRMKEDGFMPSERIYD 503



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 95/188 (50%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +++ +L+ EML     P++V +  +   + ++++ +  + L+ +M++  ++ +  ++   
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I   C+   +  A  L   +  L     I     L++G C+  + + A  L  S+   G 
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +PNVV YN +I+G C +  ++ A ++F  ME KG+  + VT+NTL+ G   +   +    
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 252 LLHRMDER 259
           LL  M +R
Sbjct: 241 LLRDMVKR 248



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 35/236 (14%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   M+Q    P+   ++ ++       + D    L+  M+  G  H++ ++  L
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +C+   +  +L L  +M+  G RP++VT  +L +G  + ++ + A+ L D M     
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM----- 175

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                      DG    G++                  +  Y+ +I+GLCK   L  A E
Sbjct: 176 -----------DGF---GFVPN----------------VVIYNTVINGLCKNRDLNNALE 205

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +F  + + G+  + VTYN +I G  N G+   A  L  DM  + + PN + F  L+
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 152/311 (48%), Gaps = 52/311 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +L   M + G+ P+ +VY+TLID FC  G I++AR  F  M+ +GC  NVVTY  
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y K++ V ++  +Y  MLSKG  P +VTY  L  GL +  ++E A +++  M+  +
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKEN 357

Query: 121 V-----------------AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           V                      TY   +DGLCK   + EA +L +++ V  CE     Y
Sbjct: 358 VEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVY 417

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGL-------------------------------- 191
             LIDG CK GKL+ A E+F ++   G                                 
Sbjct: 418 DALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477

Query: 192 ---MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
               PNVV Y  MI G C  G+ D+A+ L + ME KG  PN VT+  ++ G  ++    K
Sbjct: 478 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEK 537

Query: 249 VVELLHRMDER 259
            +ELL +M  +
Sbjct: 538 CLELLQQMSSK 548



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 113/205 (55%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN F Y  L+DG C   ++  AR+L  SM + GC  N V Y+ LI+G CK   ++E+  +
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           ++ ML  G  P V TY++L   LF+  +++ ALK+  +M  +  A     Y   IDGLCK
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G   EA +L   +    C   +  Y+ +IDG  K G++E   EL Q +   G  PN VT
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDME 222
           Y ++I+  C+ G +D+AH L  +M+
Sbjct: 557 YRVLINHCCSTGLLDEAHKLLEEMK 581



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 140/276 (50%), Gaps = 17/276 (6%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  ++  M+ +G  P+   YS +I   C   ++++A +LF  M  NG   +V  Y TL
Sbjct: 204 EKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTL 263

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   +E++ N + EM   G  P VVTY  L H   +  +V  A ++++ M     
Sbjct: 264 IDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGC 323

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-----------------GIEAYS 164
                TY   IDGLCK G I +A+++++ ++    E+                  +  Y 
Sbjct: 324 TPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYG 383

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            L+DGLCK  +++ A +L +S+   G  PN V Y+ +I G C  G++D+A ++F  M   
Sbjct: 384 ALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLEC 443

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G  PN  T+++L+    ++      +++L +M E +
Sbjct: 444 GYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS 479



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 5/260 (1%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L +MI  G  P+  ++++L+  +C +G+   A +L   M   GC    V YN LI G 
Sbjct: 98  RILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGI 157

Query: 66  CKT----KDVEE-SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           C +    KDV + +   Y EML  G+    V  +     L  I + E A  +  EM    
Sbjct: 158 CSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKG 217

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +TSTY+  I  LC    + +A +LF+ ++       +  Y+ LID  CK G +E A 
Sbjct: 218 FIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQAR 277

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  + R G  PNVVTY  +IH +    ++ KA++++  M +KG  PN VT+  L+ G 
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  +  K  ++   M + N
Sbjct: 338 CKAGKIEKASQIYKIMKKEN 357



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE-IDRARELFVSMDINGCMHNVVTYNT 60
           +EA   L  M      PN   Y  L+ G CL  E + R + +   M   GC  +   +N+
Sbjct: 59  EEAMDFLTRMRASSCLPNVLTYRILLCG-CLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ-----VEHALKLFDE 115
           L++ YC++ D   +  L  +M+  G +P  V YN L  G+    +     ++ A K + E
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M  + V       + F   LC  G   +A  + R +           YS +I  LC   K
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +E A++LFQ + R G+ P+V  Y  +I  FC  G +++A + F +ME  G APN VT+  
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+   +++ + SK  E+   M
Sbjct: 298 LIHAYLKSRKVSKANEVYEMM 318



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 100/205 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M   G  PN  VY  LIDG C  G++D A+E+F +M   G   NV TY++
Sbjct: 395 VKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSS 454

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K K ++ +L + S+ML     P VV Y  +  GL ++ + + A KL   M+   
Sbjct: 455 LIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKG 514

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   IDG  K+G + +  EL + +    C      Y  LI+  C  G L+ A 
Sbjct: 515 CNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAH 574

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L + + +     +V  Y  +I GF
Sbjct: 575 KLLEEMKQTYWPRHVAGYRKVIEGF 599



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 119/289 (41%), Gaps = 37/289 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +   M++ G  PN + YS+LID       +D A ++   M  N C  NVV Y  
Sbjct: 430 LDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTE 489

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK    +E+  L   M  KG  P VVTY  +  G  +  +VE  L+L  +M    
Sbjct: 490 MIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKG 549

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR----------------------VLKCEL 158
            A    TY   I+  C  G + EA +L   ++                      +    L
Sbjct: 550 CAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYL 609

Query: 159 GIE-----------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI---MIHG 204
             E            Y  LID   K G+LE A EL + L       +    NI   +I  
Sbjct: 610 SFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPF-SAANQNIHITLIEN 668

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
                + DKA +L+ DM ++G  P       L+ G +R N   + ++LL
Sbjct: 669 LSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 43/267 (16%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   G R + F         C +G   + RE    ++    + + V Y  +I+G C+   
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSG---KWREALSLLEKEEFVPDTVLYTKMISGLCEASL 57

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            EE+++  + M +    P V+TY  L  G     ++    ++   M           +N+
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG--------------------- 169
            +   C++G    A +L + +    C+ G   Y+ LI G                     
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 170 -------------------LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                              LC IGK E A+ + + +   G +P+  TY+ +I   CN  +
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++KA  LF +M+  G+AP+   + TL+
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLI 264



 Score = 43.9 bits (102), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMD----INGCMHNVVTYNTLINGYCKTKDVEE 73
           P A VY  LID F   G ++ A EL   +      +    N+  + TLI         ++
Sbjct: 620 PVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNI--HITLIENLSLAHKADK 677

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           +  LY++M+S+G  P +     L  GL  +++ E AL+L D +
Sbjct: 678 AFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 132/237 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+ LL+ MI  G +PN   Y +L+ G C  G++  A +LF  M   GC  + V YN 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K  D+ E+  L+ EML KG  PTV TYN+L  G     +      LF +M    
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+N  +DG CK G +VEA  LF  +R L C   + +Y+ L+ G+C  GK   A 
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L + + R G+ P++V+YNI+I G+   G +D A  LF ++   G+ P+  +++T++
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 129/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G  PN + Y  L+   C     + AR +F  M   GC  NV +Y+ LI G C+ + 
Sbjct: 43  MLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E+  L +EM+  G +P VVTY +L  GL ++ +++ A+ LF  M +     +   YN 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG  K G + EA  LF  +    C   +  Y+ L+ G  + G+      LF+ + R G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +PN+ T+N ++ GFC  G M +AH LFL+M + G  P+ V++NTLM G     +  +  
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282

Query: 251 ELLHRM 256
            LL  M
Sbjct: 283 RLLREM 288



 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 133/257 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  +   M  +G  PN F YS LI G C   ++D A EL   M   G   NVVTY +L
Sbjct: 69  EEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL 128

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G CK   ++E+++L+S M+ +G  P  V YN L  G  +   +  A +LF+EM     
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN+ + G  + G       LF+ +    C   I  ++ L+DG CK+G +  A  
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +  +G  P+VV+YN ++ G C+ G+  +A  L  +M   GV P+ V++N L+ G  
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYS 308

Query: 242 RNNETSKVVELLHRMDE 258
           ++      ++L + + +
Sbjct: 309 KSGALDHAIKLFYEIPK 325



 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 134/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA RL + M+++G  P  F Y++L+ GF   GE  R + LF  M   GC+ N+ T+N 
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK  D+ E+  L+ EM S G  P VV+YNTL  G+    +   A +L  EM  S 
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG 292

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +YN  IDG  K+G +  A +LF  +     E    +YS +ID LC+ GK+  A+
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G  P+      ++ G C   ++ ++ +LF  M      P    +N LM   
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKL 412

Query: 241 IRNNETSKVVELLHRMDERN 260
            +   +  V E+ H + ER 
Sbjct: 413 CKAKRSDDVCEIFHELTERG 432



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 108/217 (49%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ L++    +G  D     +  M   GC+ N  TY  L+   C+ +  EE+ +++  M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           ++G  P V +Y+ L  GL    +V+ A +L +EM          TY + + GLCK G + 
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA +LF  +    C      Y+ LIDG  K G +  A+ LF+ +   G +P V TYN ++
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            GF   G+  +   LF DM  +G  PN  TFN L+ G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 99/204 (48%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           H  ++YN L+    K+   +     Y++ML  G  P   TY  L   L +  + E A  +
Sbjct: 15  HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           F  M     +    +Y+  I GLC+   + EAAEL   +     +  +  Y  L+ GLCK
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +GKL+ A +LF  +   G  P+ V YN++I GF   G M +A+ LF +M  KG  P   T
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 233 FNTLMLGCIRNNETSKVVELLHRM 256
           +N+L+ G  R  E  +V  L   M
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDM 218



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 101/203 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA RL   M   G  P+   Y+TL+ G C  G+   A+ L   M  +G   ++V+YN 
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K+  ++ ++ L+ E+   G+ P   +Y+T+   L    +V  A  +F +M  + 
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A + +     + GLC+   + E+ ELF+ +   +C   I  Y+ L+  LCK  + +   
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVC 422

Query: 181 ELFQSLPRVGLMPNVVTYNIMIH 203
           E+F  L   G  P+V    +++ 
Sbjct: 423 EIFHELTERGFSPDVEISKVILE 445



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%)

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           ++YN L   L +  + +H    +++M  +     T TY   +  LC+     EA  +FR 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C   + +YS LI GLC+  K++ A EL   +   G  PNVVTY  ++ G C  G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + +A DLF  M  +G  P+ V +N L+ G  +  +  +   L   M E+ 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L   + + G+ P+AF YST+ID  C  G++  A  +F  M  NG   +      
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+ + + ES  L+  M+     P +  YN L + L +  + +   ++F E+    
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 121 VAAETSTYNTFIDGL 135
            + +       ++ L
Sbjct: 433 FSPDVEISKVILETL 447


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 153/286 (53%), Gaps = 39/286 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK--- 67
           MI+R ++PN F ++ +I+  C TG++++AR++   M + GC  NVV+YNTLI+GYCK   
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273

Query: 68  -----------------------------------TKDVEESLNLYSEMLSKGIRPTVVT 92
                                                ++  S+ ++ EML + ++P V++
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           YN+L +GL    ++  A+ + D+M  + V     TYN  I+G CKN  + EA ++F +++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                     Y+ LID  CK+GK++  + L + + R G++P+V TYN +I G C +G ++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            A  LF  + +KG+ P+ VTF+ LM G  R  E+ K   LL  M +
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 135/258 (52%), Gaps = 1/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +L  M++  V PN   ++ LIDGF     +  + ++F  M       NV++YN+
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    + E++++  +M+S G++P ++TYN L +G  +   ++ AL +F  ++   
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T  YN  ID  CK G I +   L   +        +  Y+CLI GLC+ G +E A 
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  L   GL P++VT++I++ G+C  G+  KA  L  +M   G+ P  +T+N +M G 
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515

Query: 241 IRNNETSKVVELLHRMDE 258
            +         +  +M++
Sbjct: 516 CKEGNLKAATNMRTQMEK 533



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 136/255 (53%), Gaps = 2/255 (0%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++   M+ + V+PN   Y++LI+G C  G+I  A  +   M   G   N++TYN LING+
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK   ++E+L+++  +  +G  PT   YN L     ++ +++    L +EM+   +  + 
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN  I GLC+NG I  A +LF  L   K    +  +  L++G C+ G+   A  L + 
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQL-TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKE 495

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLMLGCIRNN 244
           + ++GL P  +TYNI++ G+C +G +  A ++   ME  + +  N  ++N L+ G  +  
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 245 ETSKVVELLHRMDER 259
           +      LL+ M E+
Sbjct: 556 KLEDANMLLNEMLEK 570



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 108/245 (44%), Gaps = 37/245 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M+  GV+PN   Y+ LI+GFC    +  A ++F S+   G +     YN 
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD------ 114
           LI+ YCK   +++   L  EM  +GI P V TYN L  GL     +E A KLFD      
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466

Query: 115 ----------------------------EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
                                       EM    +     TYN  + G CK G + +AA 
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL-KAAT 525

Query: 147 LFRTL--RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             RT   +  +  + + +Y+ L+ G  + GKLE A  L   +   GL+PN +TY I+   
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEE 585

Query: 205 FCNDG 209
             + G
Sbjct: 586 MVDQG 590



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 9/246 (3%)

Query: 19  NAFVYS---TLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           NA  YS   + +DGF   G   +   +F  +SM  N C+++++  + L+  Y      E 
Sbjct: 113 NAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFEL 171

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
               +      G + + ++   L   L + ++      ++ EM    +     T+N  I+
Sbjct: 172 GFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVIN 231

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI---GKLETAWELFQSLPRVG 190
            LCK G + +A ++   ++V  C   + +Y+ LIDG CK+   GK+  A  + + +    
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND 291

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PN+ T+NI+I GF  D  +  +  +F +M  + V PN +++N+L+ G     + S+ +
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351

Query: 251 ELLHRM 256
            +  +M
Sbjct: 352 SMRDKM 357



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 2/144 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +L D +  +G+ P+   +  L++G+C  GE  +A  L   M   G     +TYN 
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 61  LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++ GYCK  +++ + N+ ++M   + +R  V +YN L  G  +  ++E A  L +EM   
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

Query: 120 DVAAETSTYNTFIDGLCKNGYIVE 143
            +     TY    + +   G++ +
Sbjct: 571 GLVPNRITYEIVKEEMVDQGFVPD 594



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 39/200 (19%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET-STYNTFIDGL 135
           L+ +++S  + P +      +  L +   +  +L+L  ++ HS   A+  S   +F+DG 
Sbjct: 70  LFRQLISSELDPDLCL--RYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGF 127

Query: 136 CKNGYIVEAAELFRTLRVL---------------------KCELGIEAY----------- 163
            +NG   +   +F  + +                      + ELG EA+           
Sbjct: 128 VRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLS 187

Query: 164 --SC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
             SC  L+  L K  +      +++ + R  + PNV T+N++I+  C  G+M+KA D+  
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247

Query: 220 DMEAKGVAPNCVTFNTLMLG 239
           DM+  G +PN V++NTL+ G
Sbjct: 248 DMKVYGCSPNVVSYNTLIDG 267


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 144/256 (56%), Gaps = 4/256 (1%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA  L   MI+R V PN F Y++LI+GFC+ G +  A+ +F  M   GC  +VVTYNTLI
Sbjct: 797  EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 856

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             G+CK+K VE+ + L+ EM  +G+     TYNTL HG  +  ++  A K+F+ M    V+
Sbjct: 857  TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 916

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             +  TYN  +D LC NG I +A  +   L+  + ++ I  Y+ +I GLC+  KL+ AW L
Sbjct: 917  PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 976

Query: 183  FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            F+SL R G+ P+ + Y  MI G C  G   +A  L   M+  G  P+   ++  +    R
Sbjct: 977  FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL----R 1032

Query: 243  NNETSKVVELLHRMDE 258
            ++ TS   EL+    E
Sbjct: 1033 DHYTSLSAELIKAAHE 1048



 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   MIQ  V PN   Y+++I+G C+ G +  A++ F  M   GC  NVVTYNT
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK + V+E + L+  M  +G    + TYNTL HG  ++ ++  AL +F  M    
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+   + GLC NG I  A   F  +R  +  +GI AY+ +I GLCK  K+E AW
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           ELF  LP  G+ P+  TY IMI G C +G   +A +L   M+ +G+
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 4/258 (1%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            +A+RLL  M++R + PN   ++ LID F   G +  AR L+  M     + NV TYN+LI
Sbjct: 762  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 821

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            NG+C    + ++  ++  M+SKG  P VVTYNTL  G  +  +VE  +KLF EM +  + 
Sbjct: 822  NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 881

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG--IEAYSCLIDGLCKIGKLETAW 180
             +  TYNT I G C+ G +  A ++F   R++ C +   I  Y+ L+D LC  GK+E A 
Sbjct: 882  GDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 939

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             + + L +  +  +++TYNI+I G C   ++ +A  LF  +  KGV P+ + + T++ G 
Sbjct: 940  VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 999

Query: 241  IRNNETSKVVELLHRMDE 258
             R     +  +L  RM E
Sbjct: 1000 CRKGLQREADKLCRRMKE 1017



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 137/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+R+L  M++R + P+   ++ LID F   G +D A+EL+  M  +    N VTYN++I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C    + ++   +  M SKG  P VVTYNTL  G  +   V+  +KLF  M      
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+  TYNT I G C+ G +  A ++F  +   +    I  +  L+ GLC  G++E+A   
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +        +V YNIMIHG C   +++KA +LF  +  +GV P+  T+  ++LG  +
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468

Query: 243 NNETSKVVELLHRMDE 258
           N    +  EL+ RM E
Sbjct: 469 NGPRREADELIRRMKE 484



 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+ LM++ G  PN  VY+TLIDG C  GE++ A EL   M+  G   +VVTYNTL+
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C +    ++  +  +M+ + I P VVT+  L     +   ++ A +L+ EM  S V 
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I+GLC +G + +A + F  +    C   +  Y+ LI G CK   ++   +L
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +   G   ++ TYN +IHG+C  G++  A D+F  M ++ V P+ +T   L+ G   
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398

Query: 243 NNETSKVVELLHRMDE 258
           N E    +     M E
Sbjct: 399 NGEIESALVKFDDMRE 414



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 123/236 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+   + +L+ GFCL   I  A  L + M  +G   NVV YNTLI+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK  ++  +L L +EM  KG+   VVTYNTL  GL    +   A ++  +M    +  
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+   ID   K G + EA EL++ +     +     Y+ +I+GLC  G+L  A + F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   G  PNVVTYN +I GFC    +D+   LF  M  +G   +  T+NTL+ G
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360



 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 1/242 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M   G  PN  +Y+T+I+G C   +++ A E+F  M+  G   + VTYNTLI
Sbjct: 692 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 751

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G   +    ++  L  +M+ + I P V+ +  L     +   +  A  L+ EM    V 
Sbjct: 752 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 811

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I+G C +G + +A  +F  +    C   +  Y+ LI G CK  ++E   +L
Sbjct: 812 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 871

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   GL+ +  TYN +IHG+C  G+++ A  +F  M   GV+P+ VT+N ++L C+ 
Sbjct: 872 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN-ILLDCLC 930

Query: 243 NN 244
           NN
Sbjct: 931 NN 932



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 126/246 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G RP+     +L++GFC       A  L  SMD  G + NVV YNT+ING CK +D
Sbjct: 665 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +L ++  M  KGIR   VTYNTL  GL    +   A +L  +M    +      +  
Sbjct: 725 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID   K G ++EA  L++ +        +  Y+ LI+G C  G L  A  +F  +   G
Sbjct: 785 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+VVTYN +I GFC   +++    LF +M  +G+  +  T+NTL+ G  +  + +   
Sbjct: 845 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904

Query: 251 ELLHRM 256
           ++ +RM
Sbjct: 905 KVFNRM 910



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 129/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + ++ LI  FC    +  A  +   M   G   ++VT+ +L++G+C    + ++
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
            +L   M+  G  P VV YNTL  GL +  ++  AL+L +EM+   + A+  TYNT + G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC +G   +AA + R +        +  ++ LID   K G L+ A EL++ + +  + PN
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            VTYN +I+G C  G++  A   F  M +KG  PN VT+NTL+ G  +     + ++L  
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340

Query: 255 RM 256
           RM
Sbjct: 341 RM 342



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 129/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + ++ LI  FC    +  A  L   M   G   ++VT  +L+NG+C+    +E+
Sbjct: 634 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 693

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L   M   G  P VV YNT+ +GL +   + +AL++F  M+   + A+  TYNT I G
Sbjct: 694 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 753

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L  +G   +AA L R +   K +  +  ++ LID   K G L  A  L++ + R  ++PN
Sbjct: 754 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 813

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYN +I+GFC  G +  A  +F  M +KG  P+ VT+NTL+ G  ++      ++L  
Sbjct: 814 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 873

Query: 255 RM 256
            M
Sbjct: 874 EM 875



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 109/199 (54%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + +A  + DLM+ +G  P+   Y+TLI GFC +  ++   +LF  M   G + +  TYNT
Sbjct: 830  LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 889

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LI+GYC+   +  +  +++ M+  G+ P +VTYN L   L    ++E AL + +++Q S+
Sbjct: 890  LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 949

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  +  TYN  I GLC+   + EA  LFR+L     +    AY  +I GLC+ G    A 
Sbjct: 950  MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 1009

Query: 181  ELFQSLPRVGLMPNVVTYN 199
            +L + +   G MP+   Y+
Sbjct: 1010 KLCRRMKEDGFMPSERIYD 1028



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 103/190 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +  DLM  +G  PN   Y+TLI GFC    +D   +LF  M   G   ++ TYNTLI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   +  +L+++  M+S+ + P ++T+  L HGL    ++E AL  FD+M+ S+  
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  I GLCK   + +A ELF  L V   +     Y+ +I GLCK G    A EL
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478

Query: 183 FQSLPRVGLM 192
            + +   G++
Sbjct: 479 IRRMKEEGII 488



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 104/195 (53%)

Query: 45  SMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
            M++ G  H++ ++  LI+ +C+   +  +L++  +M+  G  P++VT+ +L HG   ++
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           ++  A  L   M  S        YNT IDGLCKNG +  A EL   +        +  Y+
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            L+ GLC  G+   A  + + + +  + P+VVT+  +I  F   G +D+A +L+ +M   
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 225 GVAPNCVTFNTLMLG 239
            V PN VT+N+++ G
Sbjct: 276 SVDPNNVTYNSIING 290



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 95/200 (47%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G+  +   E++  L+ EM+     P++V +  L      + + E  +    +M+   
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  ++   I   C+   +  A  +   +  L  E  I  +  L+ G C + ++  A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G  PNVV YN +I G C +G+++ A +L  +ME KG+  + VT+NTL+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 241 IRNNETSKVVELLHRMDERN 260
             +   S    +L  M +R+
Sbjct: 222 CYSGRWSDAARMLRDMMKRS 241



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 95/189 (50%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +++ +L+ EML     P++V +  +   + ++++ +  + L+ +M++  ++ +  ++   
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I   C+   +  A  L   +  L     I     L++G C+  + + A  L  S+   G 
Sbjct: 646 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +PNVV YN +I+G C +  ++ A ++F  ME KG+  + VT+NTL+ G   +   +    
Sbjct: 706 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765

Query: 252 LLHRMDERN 260
           LL  M +R 
Sbjct: 766 LLRDMVKRK 774



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 35/236 (14%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   M+Q    P+   ++ ++       + D    L+  M+  G  H++ ++  L
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +C+   +  +L L  +M+  G RP++VT  +L +G  + ++ + A+ L D M     
Sbjct: 646 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM----- 700

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                      DG    G++                  +  Y+ +I+GLCK   L  A E
Sbjct: 701 -----------DGF---GFVPN----------------VVIYNTVINGLCKNRDLNNALE 730

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +F  + + G+  + VTYN +I G  N G+   A  L  DM  + + PN + F  L+
Sbjct: 731 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 786


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 147/269 (54%), Gaps = 9/269 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   ++  GV P+   Y++LI G C+    D ARELF  M+  GC  + VTYN 
Sbjct: 339 LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNV 398

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK   +EE+ +L  +M+  G  P VVTYNT+  GL +  +VE AL LF+EM+   
Sbjct: 399 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 458

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAA------ELFRTLRVLKCE---LGIEAYSCLIDGLC 171
                 ++NT I GLC+   I +A       E FR L+ +  +     +  YS LI GLC
Sbjct: 459 CTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 518

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
            I +++ A  L + + +    P VVT N +IHG C  G++ +A ++   M + G +P+ V
Sbjct: 519 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 578

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           T+NTL+ G  R  +T +  ELL  M  R 
Sbjct: 579 TYNTLVHGHCRAGQTERARELLSDMVARG 607



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 141/267 (52%), Gaps = 9/267 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLT---------GEIDRARELFVSMDINGC 51
           ++EA  L + M + G  PN   ++T+I G C           G++D A  L   M  +G 
Sbjct: 444 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGH 503

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           + +VVTY+TLI+G C    V+++ +L  +M+ +  +PTVVT NTL HGL +  +++ A +
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 563

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           + D M  S  + +  TYNT + G C+ G    A EL   +        +  Y+ L+ GLC
Sbjct: 564 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 623

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K  +L  A  +F  +   G  PN+ TY  +I GFC+ GQ+D    LF +M   G++P+ V
Sbjct: 624 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 683

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDE 258
            + TL     ++  +++ +E+L    E
Sbjct: 684 VYGTLAAELCKSGRSARALEILREGRE 710



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 118/240 (49%), Gaps = 9/240 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +LD M+  G  P+   Y+TL+ G C  G+ +RAREL   M   G   NVVTY  
Sbjct: 558 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 617

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   + E+  ++++M S G  P + TY  L  G     QV+  LKLF EM  + 
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 677

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-VLKCE-LGIEAYSCLIDGLCKIGKLET 178
           ++ +   Y T    LCK+G    A E+ R  R  L+ E  G E Y   +DGL + GK+E 
Sbjct: 678 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEM 737

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH-------DLFLDMEAKGVAPNCV 231
           A    + + R G +P       ++ G C  GQ  +A        DL    +A+G A   V
Sbjct: 738 ALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFV 797



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 129/257 (50%), Gaps = 6/257 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA------RELFVSMDINGCMHN 54
           +D+A  LL  M      P+   Y T++DG C  G ++ A      REL  S   +    +
Sbjct: 228 VDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPS 287

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           +  YN +I G C+   ++E++ ++ +M  + + P   +Y  L  GL +  ++  A  LF 
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++ HS V   T  Y + I GLC      +A ELF  +    C      Y+ +ID  CK G
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            LE A +L + +   G +P+VVTYN ++ G C   ++++A  LF +ME  G  PN  + N
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467

Query: 235 TLMLGCIRNNETSKVVE 251
           T++LG  + ++  +  +
Sbjct: 468 TIILGLCQQSKIDQACQ 484



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 9/264 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M ++ +   A    +++ G   +G ID A +++       C+   VT N 
Sbjct: 161 VDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCL---VTLNV 217

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C    V+++  L   M  +   P  V+Y T+  GL +  +VE A++LF + +   
Sbjct: 218 LLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPS 277

Query: 121 VAAETST------YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            ++ +S+      YN  I GLC+N  I EA ++F  +          +Y  LIDGL K G
Sbjct: 278 SSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAG 337

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           KL  A  LFQ L   G+ P+ V Y  +IHG C     D A +LF DM  +G  P+ VT+N
Sbjct: 338 KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 397

Query: 235 TLMLGCIRNNETSKVVELLHRMDE 258
            ++    +     +  +L+ +M E
Sbjct: 398 VMIDASCKRGMLEEACDLIKKMIE 421



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 8/251 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++  LM +    P   VY+ LID      E +  +++   M   GC  +  T+ T++
Sbjct: 28  EAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTIL 86

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CK   ++E+  +  EM S+ I P   T + L H L     +E A +L + M      
Sbjct: 87  CGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP----V 142

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A +S YN  +  LCK   + +A EL RT+   +  L   +   ++ GL   G+++ A ++
Sbjct: 143 ANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQV 202

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           ++   R    P +VT N+++ GFC+ GQ+DKA +L   M  +  AP+ V++ T++ G  +
Sbjct: 203 YRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCK 259

Query: 243 NNETSKVVELL 253
                + V L 
Sbjct: 260 AGRVEEAVRLF 270



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI-EAYSCLIDGLCKIGKLETAWELFQSL 186
           + + I G C  G   EA ++F  +   +C     + Y+ LID L K  + E   ++ Q +
Sbjct: 13  FTSVIQGWCNVGRTFEAVKIFSLME--ECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVM 70

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
              G  P+  T+  ++ G C  G+MD+A  +  +M ++ + P   T + L
Sbjct: 71  VDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 144/254 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L +M +RG +P+   Y+ L++G+C    +  ARELF  M   G   +V+ YN LI
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCKTK V+E++ L+ E+ +K + PT+ +YN+L  GL    ++ H  KL DEM  S   
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ID LCK G I+EA  +   +     +  I  Y+ ++DG C    +  A ++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + + GL P+++ YN++I+G+C    +D+A  LF +M  K + P+  ++N+L+ G   
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 243 NNETSKVVELLHRM 256
                 V ELL  M
Sbjct: 523 LGRIPHVQELLDEM 536



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 141/257 (54%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L +M+++GV+PN   Y+ ++DG+CL   ++ A+++F  M  +G   +++ YN LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCKT+ V+E++ L+ EM  K + P + +YN+L  GL  + ++ H  +L DEM  S  +
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  +D  CK     +A  LFR + V            ++D LCK  KL+ A + 
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDA 601

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + L   G  PNV TY I+I+  C DG   +A  L   ME     P+ +TF  ++   ++
Sbjct: 602 LKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQ 661

Query: 243 NNETSKVVELLHRMDER 259
            NET K  +L   M  R
Sbjct: 662 RNETDKAEKLREEMIAR 678



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 138/258 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E ++LL  M++  V P+ + ++ LID  C  G I  A+ +   M   G   ++VTYN L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYC  ++V E+  L++ M+ +G+ P V+ YN L  G  +   V+ A+ LF E+ + ++ 
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              ++YN+ IDGLC +G I    +L   +        +  Y+ LID LCK G++  A  +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + G+ PN+VTYN M+ G+C    ++ A D+F  M   G+ P+ + +N L+ G  +
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487

Query: 243 NNETSKVVELLHRMDERN 260
                + + L   M  +N
Sbjct: 488 TEMVDEAIVLFKEMRHKN 505



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 122/232 (52%), Gaps = 1/232 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   +  + + P    Y++LIDG C +G I   ++L   M  +    +VVTYN 
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   + E+L +   M+ KG++P +VTYN +  G    + V  A  +F+ M  S 
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I+G CK   + EA  LF+ +R       I +Y+ LIDGLC +G++    
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           EL   +   G  P+V+TYNI++  FC     DKA  LF  +  +G+ P+  T
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYT 581



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 129/277 (46%), Gaps = 36/277 (12%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M +  V+PN  +YS LIDG C  G +  A  L   +   G + + VTYN+LI+
Sbjct: 179 ALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLID 238

Query: 64  GYCKTKDVEESLNLYSEML-----------------------------------SKGIRP 88
           G C     +E   L ++M+                                    +G +P
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            +VTYN L  G      V  A +LF+ M    +  +   YN  IDG CK   + EA  LF
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           + L        I +Y+ LIDGLC  G++    +L   +      P+VVTYNI+I   C +
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN 244
           G++ +A  + + M  KGV PN VT+N +M G C+RNN
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 131/256 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   +  +G+ P+   ++ LI+ +        A  L  ++  +G   N+VT+NT+IN
Sbjct: 74  AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    + ++L+    +L++G      TY TL +GL +  Q++ AL L  EM+ S V  
Sbjct: 134 GFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               Y+  IDGLCK+G++ +A  L   +      L    Y+ LIDG C +G+ +   +L 
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLL 253

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + R  + P+  T+NI+I   C +G++ +A  +   M  +G  P+ VT+N LM G    
Sbjct: 254 TKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313

Query: 244 NETSKVVELLHRMDER 259
               +  EL +RM +R
Sbjct: 314 ENVHEARELFNRMVKR 329



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 115/259 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M++    P   V+  L+      G    A  LF  +   G   ++ T+  
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN Y        + +L + +L  G +P +VT+NT+ +G      +  AL     +    
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GL KNG I  A  L + +     +  +  YS LIDGLCK G +  A 
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G++ + VTYN +I G C+ G+  +   L   M  + V P+  TFN L+   
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +   +L  M +R
Sbjct: 276 CKEGRILEAQGVLAMMSKR 294



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 99/204 (48%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            ++ L+    +      +++L++++ SKGI P++ T+  L +  F       A  L   +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
             S       T+NT I+G C NG I +A +  + L           Y  LI+GL K G++
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A  L Q + +  + PN+V Y+ +I G C DG +  A  L   +  +G+  + VT+N+L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + GC       +V +LL +M   N
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVREN 260



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 90/194 (46%)

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C+ ++V++++  ++ M+     P    ++ L   +  +     A+ LF ++Q   ++   
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
           +T+   I+      +   A  L  T+     +  +  ++ +I+G C  G +  A +  Q+
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           L   G + +  TY  +I+G   +GQ+  A  L  +ME   V PN V ++ L+ G  ++  
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 246 TSKVVELLHRMDER 259
            S  + L  ++ ER
Sbjct: 211 VSDALGLCSQIGER 224


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  174 bits (441), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+  M  RG  PN   Y TLIDG C  G +  A  +   M   G   +++ YN 
Sbjct: 277 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 336

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   V+ES+ L    +S GI+P VVTY+++ +GL   ++++ A +L   ++   
Sbjct: 337 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 396

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+T IDGLCK G + EA +L+  +    C+  +  YS LIDGLCK G+++ A 
Sbjct: 397 CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAH 456

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + R+G  P+ +TYN +I G C+   +D+A +L  +ME    AP+ VT+N L+ G 
Sbjct: 457 LLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGM 516

Query: 241 IRNNETSKVVELLHRMDER 259
            R       V LL +   R
Sbjct: 517 CRMERVDSAVVLLEQAKAR 535



 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 149/302 (49%), Gaps = 42/302 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFC----------------------------- 31
           +D+A R  D M  + + PN F+ S LIDG C                             
Sbjct: 25  IDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTA 84

Query: 32  -LTG-----EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
            L+G      +D+A  +   M  +GC  NVVTYN+LI+G CK  + + +  L+  M S  
Sbjct: 85  LLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVE 144

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHSDVAAETS----TYNTFIDGLCKN 138
             P++VTYNTL  GLF   ++E A+ LF EM   +  D+    S    TY+  IDGLCK 
Sbjct: 145 CSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKA 204

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             + +A EL  +++   C   +  Y+ L+DGLCK  K+  AWE+ + +   G +PN+VTY
Sbjct: 205 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY 264

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N ++HG C   ++  A  L  DM  +G  PN VT+ TL+ G  +         +L  M +
Sbjct: 265 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 324

Query: 259 RN 260
           + 
Sbjct: 325 KG 326



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 140/257 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M+  G  PN   Y++L+ G C    +  A  L   M   GC  NVVTY TLI+
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   V+++  + ++M+ KG  P ++ YN L +GL +  QV+ ++ L        +  
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY++ I GLC++  + EA  L   ++   C   +  YS LIDGLCK GK++ A++L+
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G   +VVTY+ +I G C  G++D+AH L   M   G  P+ +T+N+L+ G    
Sbjct: 425 EVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDL 484

Query: 244 NETSKVVELLHRMDERN 260
           N   + +EL+  M+  N
Sbjct: 485 NHLDEAIELVEEMERSN 501



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 139/262 (53%), Gaps = 7/262 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L  M   G  PN   Y++LIDG C   E DRA+ELF  M    C  ++VTYNT
Sbjct: 95  LDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNT 154

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG-------IRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           L++G  +T  +E ++ L+ EML +          P V+TY+ L  GL + ++V  A++L 
Sbjct: 155 LLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELL 214

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           + M+    + +  TY   +DGLCK   +  A E+ R +    C   +  Y+ L+ GLC+ 
Sbjct: 215 ESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRA 274

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            ++  A  L + +   G  PNVVTY  +I G C  G++  A  +  DM  KG  P+ + +
Sbjct: 275 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 334

Query: 234 NTLMLGCIRNNETSKVVELLHR 255
           N L+ G  + ++  + + LL R
Sbjct: 335 NMLINGLCKADQVDESIALLRR 356



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 132/226 (58%), Gaps = 7/226 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RLL  +  RG  P+  +YSTLIDG C  G++D A +L+  M  +GC  +VVTY+T
Sbjct: 382 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYST 441

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V+E+  L + M+  G  P+ +TYN+L  GL +++ ++ A++L +EM+ S+
Sbjct: 442 LIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSN 501

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC------ELGIEAYSCLIDGLCKIG 174
            A    TYN  I G+C+   +  A  L    +  +C       L   AYS LIDGLCK G
Sbjct: 502 CAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA-RCVAAGGTALDTIAYSSLIDGLCKAG 560

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
           ++  A + FQ +   G++P+ +TY+I++ G      + +   L LD
Sbjct: 561 RVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 606



 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 134/247 (54%), Gaps = 7/247 (2%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P+ + Y+ L+ GFC  GEID+A+  F  M     + NV   + LI+G CK K   ++L 
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            +  M   GI    V Y  L  GL++  +++ AL +  EM+         TYN+ IDGLC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL--PRVGLM-- 192
           KN     A ELF  ++ ++C   +  Y+ L+DGL + GKLE A  LFQ +   R   M  
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 193 ---PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
              PNV+TY+++I G C   ++ +A +L   M+A+G +P+ +T+  L+ G  + ++ +  
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 250 VELLHRM 256
            E+L  M
Sbjct: 246 WEVLREM 252



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 7/266 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM------DING-CMHN 54
           D A  L + M      P+   Y+TL+DG   TG+++RA  LF  M      D++  C  N
Sbjct: 131 DRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPN 190

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           V+TY+ LI+G CK   V +++ L   M ++G  P V+TY  L  GL +  +V  A ++  
Sbjct: 191 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR 250

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM  +       TYN+ + GLC+   + +A  L R +    C   +  Y  LIDGLCK+G
Sbjct: 251 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG 310

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +++ A  +   +   G  P+++ YN++I+G C   Q+D++  L     + G+ P+ VT++
Sbjct: 311 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 370

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
           +++ G  R+N   +   LL  +  R 
Sbjct: 371 SVIYGLCRSNRLDEACRLLLYVKSRG 396



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 136/258 (52%), Gaps = 5/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE+  LL   +  G++P+   YS++I G C +  +D A  L + +   GC  +V+ Y+T
Sbjct: 347 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 406

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V+E+ +LY  M   G    VVTY+TL  GL +  +V+ A  L   M    
Sbjct: 407 LIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 466

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYN+ I GLC   ++ EA EL   +    C      Y+ LI G+C++ ++++A 
Sbjct: 467 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAV 526

Query: 181 ELF-QSLPRV----GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            L  Q+  R     G   + + Y+ +I G C  G++ +A D F +M   GV P+ +T++ 
Sbjct: 527 VLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSI 586

Query: 236 LMLGCIRNNETSKVVELL 253
           L+ G  ++ +  ++  L+
Sbjct: 587 LLEGLKKSKDLHELRHLV 604



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 7/217 (3%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  +V TY  L+ G+C+  +++++   + EM SK + P V   + L  GL +  +   AL
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           + F  MQ S + A+T  Y   + GL K   + +A  +   +R   CE  +  Y+ LIDGL
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK------ 224
           CK  + + A ELF+ +  V   P++VTYN ++ G    G++++A  LF +M  +      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 225 -GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              +PN +T++ L+ G  + N  S+ VELL  M  R 
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 221



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   +   YS+LIDG C  G +  A + F  M  NG + + +TY+ L+ G  K+KD+ E 
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHEL 600

Query: 75  LNLY-SEMLSKGIR 87
            +L   +M+  G R
Sbjct: 601 RHLVLDQMVQLGYR 614


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  174 bits (441), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 147/262 (56%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR---ARELFVSMDINGCMHNVVT 57
           +++A  ++D M   G  PN   Y+TLIDG+C  G + +   A  +   M  N    N VT
Sbjct: 246 LNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVT 305

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N LI+G+CK +++  +L ++ EM S+G++PTVVTYN+L +GL    ++  A  L DEM 
Sbjct: 306 FNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEML 365

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S++     TYN  I+G CK   + EA ELF  +        +  ++ L+ G CK GK+E
Sbjct: 366 SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKME 425

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A+ L + +   G +PN  TYN +I GFC +G+M++  +L  +M+ +GV  + VT+N L+
Sbjct: 426 EAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILI 485

Query: 238 LGCIRNNETSKVVELLHRMDER 259
                  E  K   L+  M ++
Sbjct: 486 SAWCEKKEPKKAARLIDEMLDK 507



 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 143/252 (56%), Gaps = 3/252 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+R + PN   ++T+I+G C  G++++A ++   M + G   NVVTYNTLI+GYCK   
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280

Query: 71  VEESLN---LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           V +      +  EM+   + P  VT+N L  G  +   +  ALK+F+EMQ   +     T
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN+ ++GLC  G + EA  L   +     +  +  Y+ LI+G CK   LE A ELF ++ 
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           + GL PNV+T+N ++HG+C  G+M++A  L   M  KG  PN  T+N L++G  R  +  
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460

Query: 248 KVVELLHRMDER 259
           +V  LL+ M  R
Sbjct: 461 EVKNLLNEMQCR 472



 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 127/233 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LLD M+   ++PN   Y+ LI+G+C    ++ ARELF ++   G   NV+T+NT
Sbjct: 354 LNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNT 413

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYCK   +EE+  L   ML KG  P   TYN L  G     ++E    L +EMQ   
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRG 473

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A+T TYN  I   C+     +AA L   +     +     Y+ L++G C  G L  A 
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAAL 533

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            L + + + G   NVVTYN++I G+C  G+++ A+ L  +M  KG+ PN  T+
Sbjct: 534 NLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A ++ + M  +G++P    Y++L++G C  G+++ A+ L   M  +    NV+TYN 
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK K +EE+  L+  +  +G+ P V+T+NTL HG  +  ++E A  L   M    
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKG 438

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                STYN  I G C+ G + E   L   ++    +     Y+ LI   C+  + + A 
Sbjct: 439 FLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAA 498

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL P+ +TYNI+++G+C +G +  A +L   ME +G   N VT+N L+ G 
Sbjct: 499 RLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGY 558

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +      LL+ M E+
Sbjct: 559 CRKGKLEDANGLLNEMLEK 577



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 107/213 (50%), Gaps = 5/213 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D + ++G+ PN   ++TL+ G+C  G+++ A  L   M   G + N  TYN 
Sbjct: 389 LEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   +EE  NL +EM  +G++   VTYN L     E  + + A +L DEM    
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  ++G C  G +  A  L + +        +  Y+ LI G C+ GKLE A 
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDAN 568

Query: 181 ELFQSLPRVGLMPNVVTYNI-----MIHGFCND 208
            L   +   GL+PN  TY I     M  GF  D
Sbjct: 569 GLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 12/262 (4%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL-FVSMDI---NGCMHNVVTYNTL 61
           RLL+L+      P      +++D F + GE + +  L F S+ +     C ++++  + L
Sbjct: 112 RLLNLLANAKHYPKI---RSILDSF-VKGETNCSISLIFHSLSVCSGQFCANSIIA-DML 166

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +  Y +       L  +        + +V++ N L   L + ++      ++ EM    +
Sbjct: 167 VLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKI 226

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK---IGKLET 178
           +    T+NT I+GLCK G + +A ++   ++V      +  Y+ LIDG CK   +GK+  
Sbjct: 227 SPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYK 286

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  + + +    + PN VT+N++I GFC D  +  A  +F +M+++G+ P  VT+N+L+ 
Sbjct: 287 ADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVN 346

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G     + ++   LL  M   N
Sbjct: 347 GLCNEGKLNEAKVLLDEMLSSN 368


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 144/254 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L +M +RG +P+   Y+ L++G+C    +  ARELF  M   G   +V+ YN LI
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCKTK V+E++ L+ E+ +K + PT+ +YN+L  GL    ++ H  KL DEM  S   
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ID LCK G I+EA  +   +     +  I  Y+ ++DG C    +  A ++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + + GL P+++ YN++I+G+C    +D+A  LF +M  K + P+  ++N+L+ G   
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 243 NNETSKVVELLHRM 256
                 V ELL  M
Sbjct: 523 LGRIPHVQELLDEM 536



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 141/257 (54%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L +M+++GV+PN   Y+ ++DG+CL   ++ A+++F  M  +G   +++ YN LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCKT+ V+E++ L+ EM  K + P + +YN+L  GL  + ++ H  +L DEM  S  +
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  +D  CK     +A  LFR + V            ++D LCK  KL+ A + 
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDA 601

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + L   G  PNV TY I+I+  C DG   +A  L   ME     P+ +TF  ++   ++
Sbjct: 602 LKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQ 661

Query: 243 NNETSKVVELLHRMDER 259
            NET K  +L   M  R
Sbjct: 662 RNETDKAEKLREEMIAR 678



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 138/258 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E ++LL  M++  V P+ + ++ LID  C  G I  A+ +   M   G   ++VTYN L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYC  ++V E+  L++ M+ +G+ P V+ YN L  G  +   V+ A+ LF E+ + ++ 
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              ++YN+ IDGLC +G I    +L   +        +  Y+ LID LCK G++  A  +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + G+ PN+VTYN M+ G+C    ++ A D+F  M   G+ P+ + +N L+ G  +
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487

Query: 243 NNETSKVVELLHRMDERN 260
                + + L   M  +N
Sbjct: 488 TEMVDEAIVLFKEMRHKN 505



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 122/232 (52%), Gaps = 1/232 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   +  + + P    Y++LIDG C +G I   ++L   M  +    +VVTYN 
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   + E+L +   M+ KG++P +VTYN +  G    + V  A  +F+ M  S 
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I+G CK   + EA  LF+ +R       I +Y+ LIDGLC +G++    
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           EL   +   G  P+V+TYNI++  FC     DKA  LF  +  +G+ P+  T
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYT 581



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 130/280 (46%), Gaps = 36/280 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  LL  M +  V+PN  +YS LIDG C  G +  A  L   +   G + + VTYN+
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNS 235

Query: 61  LINGYCKTKDVEESLNLYSEML-----------------------------------SKG 85
           LI+G C     +E   L ++M+                                    +G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +P +VTYN L  G      V  A +LF+ M    +  +   YN  IDG CK   + EA 
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAM 355

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            LF+ L        I +Y+ LIDGLC  G++    +L   +      P+VVTYNI+I   
Sbjct: 356 VLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN 244
           C +G++ +A  + + M  KGV PN VT+N +M G C+RNN
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 131/256 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   +  +G+ P+   ++ LI+ +        A  L  ++  +G   N+VT+NT+IN
Sbjct: 74  AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    + ++L+    +L++G      TY TL +GL +  Q++ AL L  EM+ S V  
Sbjct: 134 GFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               Y+  IDGLCK+G++ +A  L   +      L    Y+ LIDG C +G+ +   +L 
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLL 253

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + R  + P+  T+NI+I   C +G++ +A  +   M  +G  P+ VT+N LM G    
Sbjct: 254 TKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313

Query: 244 NETSKVVELLHRMDER 259
               +  EL +RM +R
Sbjct: 314 ENVHEARELFNRMVKR 329



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 115/259 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M++    P   V+  L+      G    A  LF  +   G   ++ T+  
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN Y        + +L + +L  G +P +VT+NT+ +G      +  AL     +    
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GL KNG I  A  L + +     +  +  YS LIDGLCK G +  A 
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G++ + VTYN +I G C+ G+  +   L   M  + V P+  TFN L+   
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +   +L  M +R
Sbjct: 276 CKEGRILEAQGVLAMMSKR 294



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 99/203 (48%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           ++ L+    +      +++L++++ SKGI P++ T+  L +  F       A  L   + 
Sbjct: 58  FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATIL 117

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S       T+NT I+G C NG I +A +  + L           Y  LI+GL K G+++
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  L Q + +  + PN+V Y+ +I G C DG +  A  L   +  +G+  + VT+N+L+
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC       +V +LL +M   N
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVREN 260



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 90/194 (46%)

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C+ ++V++++  ++ M+     P    ++ L   +  +     A+ LF ++Q   ++   
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
           +T+   I+      +   A  L  T+     +  +  ++ +I+G C  G +  A +  Q+
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           L   G + +  TY  +I+G   +GQ+  A  L  +ME   V PN V ++ L+ G  ++  
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 246 TSKVVELLHRMDER 259
            S  + L  ++ ER
Sbjct: 211 VSDALGLCSQIGER 224


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 139/253 (54%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+ + MI  G+ P+   + TLIDG C  G++ RA+E+F  M + G +  V+ Y  LI G 
Sbjct: 168 RIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGL 227

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C    +EE+ +++  M   G+ P V TYNTL  G  ++   + AL+L+ +M    +  + 
Sbjct: 228 CSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDV 287

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            T+   IDGLCK G +  A  LF  +        I  Y+ LID  CK+G +  A  LF  
Sbjct: 288 VTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLE 347

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           L R  + P+V TY+I+I G C+  + ++A ++F  M  +G+  N VT+N+L+ GC +  +
Sbjct: 348 LERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGK 407

Query: 246 TSKVVELLHRMDE 258
             K +E+  +M E
Sbjct: 408 MDKALEICSQMTE 420



 Score =  173 bits (439), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 139/246 (56%), Gaps = 2/246 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D M  +G+ P   VY+ LI G C   +I+ A  +  +M   G   NV TYNTL++
Sbjct: 201 AQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMD 260

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK  + +++L LY +ML +G+ P VVT+  L  GL +  +++ A  LF  M    V  
Sbjct: 261 GYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTP 320

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             + YN+ ID  CK G + EA  LF  L   +    +  YS LI GLC + + E A  +F
Sbjct: 321 NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIF 380

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-C-I 241
           + + + G++ N VTYN +I G C +G+MDKA ++   M   GV PN +TF+TL+ G C I
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440

Query: 242 RNNETS 247
           RN + +
Sbjct: 441 RNLQAA 446



 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 136/251 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL   M+  G+ P+   +  LIDG C  GE+  AR LFV+M       N+  YN+LI
Sbjct: 270 QALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLI 329

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + YCK  DV E++ L+ E+    + P V TY+ L  GL  + + E A  +F++M    + 
Sbjct: 330 DAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGIL 389

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A + TYN+ IDG CK G + +A E+   +     E  +  +S LIDG CKI  L+ A  +
Sbjct: 390 ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGI 449

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +    L P+VVTY  MI G C  G M +A  L+ DM   G+ PNC T + L+ G  +
Sbjct: 450 YSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCK 509

Query: 243 NNETSKVVELL 253
           + + S  +EL 
Sbjct: 510 DGKISDALELF 520



 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 123/237 (51%), Gaps = 13/237 (5%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+ F YS LI G C     + A  +F  M   G + N VTYN+LI+G CK   ++++L
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            + S+M   G+ P V+T++TL  G  +I  ++ A+ ++ EM    ++ +  TY   IDG 
Sbjct: 413 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGH 472

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ-----SLPRVG 190
           CK G + EA +L+  +            SCL+DGLCK GK+  A ELF        PR  
Sbjct: 473 CKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCN 532

Query: 191 L--------MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +        + N V Y  +IHG C DGQ  KA  LF DM   G+ P+ V +  ++ G
Sbjct: 533 VDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRG 589



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 137/269 (50%), Gaps = 13/269 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  L   MI+  V PN  VY++LID +C  G++  A  LF+ ++      +V TY+ 
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSI 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C     EE+ N++ +M  +GI    VTYN+L  G  +  +++ AL++  +M  + 
Sbjct: 363 LIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG 422

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T++T IDG CK   +  A  ++  + +      +  Y+ +IDG CK G ++ A 
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEAL 482

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD----------MEAKGVAP-- 228
           +L+  +   G+ PN  T + ++ G C DG++  A +LF +          ++A G  P  
Sbjct: 483 KLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSL 542

Query: 229 -NCVTFNTLMLGCIRNNETSKVVELLHRM 256
            N V +  L+ G  ++ + SK V+L   M
Sbjct: 543 TNHVAYTALIHGLCQDGQFSKAVKLFSDM 571



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 119/244 (48%), Gaps = 13/244 (5%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELF----VSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           PN  VY  LI   C    ++ A  ++     ++ I  C       N L+    KT   E 
Sbjct: 115 PN--VYGELIIVLCKMELVEEALSMYHKVGAALTIQAC-------NVLLYVLVKTGRFEL 165

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
              +Y EM+S G+ P+V+T+ TL  G      +  A ++FDEM+   +      Y   I 
Sbjct: 166 LWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIR 225

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLC +  I EA  + R +R +     +  Y+ L+DG CK+   + A  L+Q +   GL+P
Sbjct: 226 GLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVP 285

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VVT+ I+I G C  G+M  A +LF++M    V PN   +N+L+    +  + S+ + L 
Sbjct: 286 DVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALF 345

Query: 254 HRMD 257
             ++
Sbjct: 346 LELE 349



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 27/239 (11%)

Query: 40  RELFVSMDINGCMHNVVTYN---------TLINGYCKTKDVE-------ESLNLYSEML- 82
           + + V + +NG M  VV+ +         T++N     K +E       +++ LYS ++ 
Sbjct: 7   KSVLVRIGLNGTMLQVVSLSSLTPDSLITTVLNCRSPWKALEFFNAAPEKNIQLYSAIIH 66

Query: 83  ----SKGIRPTVVTYNTLFHGLFEIHQVEHALKL-FDEMQHSDVAAET-STYNTFIDGLC 136
               SK +       N L   L + H+  HA +L F E+     +  T + Y   I  LC
Sbjct: 67  VLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLC 126

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K   + EA  ++  +      L I+A + L+  L K G+ E  W +++ +   GL P+V+
Sbjct: 127 KMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVI 183

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           T+  +I G C  G + +A ++F +M  KG+ P  + +  L+ G   +N+  +  E +HR
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEE-AESMHR 241


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  174 bits (440), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 145/256 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  M   G  PNA  Y+TL+  FC  GE+DRA  L   M   G   N+VT+N+++
Sbjct: 175 EALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVV 234

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   +E++  ++ EM+ +G+ P  V+YNTL  G  ++     AL +F EM    + 
Sbjct: 235 NGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIM 294

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+ + I  +CK G +  A  L R +R    ++    ++ LIDG CK G L+ A   
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLA 354

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + +  + P+VV YN +I+G+C  G+MD+A +L  +MEAKGV P+ VT++T++    +
Sbjct: 355 VREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCK 414

Query: 243 NNETSKVVELLHRMDE 258
           N +T    +L  +M E
Sbjct: 415 NGDTHSAFQLNQQMLE 430



 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 140/237 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+D+M + G++PN   ++++++G C  G ++ AR++F  M   G   + V+YNT
Sbjct: 208 VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNT 267

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GYCK     E+L++++EM  KGI P VVT+ +L H + +   +E A+ L  EM+   
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   IDG CK G++ +A    R +R  + +  +  Y+ LI+G C +G+++ A 
Sbjct: 328 LQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEAR 387

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           EL + +   G+ P+VVTY+ ++  +C +G    A  L   M   GV P+ +T+++L+
Sbjct: 388 ELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A ++ D M++ G+ P+   Y+TL+ G+C  G    A  +F  M   G M +VVT+ +
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTS 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  ++E ++ L  EM  +G++   +T+  L  G  +   ++ AL    EM+   
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      YN  I+G C  G + EA EL R +     +  +  YS ++   CK G   +A+
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAF 422

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L Q +   G++P+ +TY+ +I   C + ++  AH LF +M + G+ P+ VT+ +L+ G 
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482

Query: 241 IRNNETSKVVELLHRM 256
            +     + + L   M
Sbjct: 483 CKEGNVERALSLHDEM 498



 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 135/255 (52%), Gaps = 5/255 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC--MHNVVTY 58
           ++ A  L+  M +RG++ N   ++ LIDGFC  G +D A  L    ++  C    +VV Y
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA--LLAVREMRQCRIQPSVVCY 370

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LINGYC    ++E+  L  EM +KG++P VVTY+T+     +      A +L  +M  
Sbjct: 371 NALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLE 430

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + V  +  TY++ I  LC+   + +A  LF+ +  L  +     Y+ LIDG CK G +E 
Sbjct: 431 NGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVER 490

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  L   + + G++P+VVTY+++I+G     +  +A  L   +  +   P  + ++ LM 
Sbjct: 491 ALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR 550

Query: 239 GCIRNNETSKVVELL 253
            C RN E   V+ LL
Sbjct: 551 -CCRNAELKSVLALL 564



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 1/210 (0%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   +V+ YN ++        +  +   +  MLS G+ P V TYN L   L      + A
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           L +  +M+ +       TYNT +   C+ G +  A  L   +R    +  +  ++ +++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           +CK G++E A ++F  + + GL P+ V+YN ++ G+C  G   +A  +F +M  KG+ P+
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            VTF +L+    +     + V L+  M ER
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRER 326



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 15/227 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A +L   M++ GV P+A  YS+LI   C    +  A  LF +M   G   + VTY +LI
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK  +VE +L+L+ EM+  G+ P VVTY+ L +GL +  + + A +L  ++ H +  
Sbjct: 480 DGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPV 539

Query: 123 ---------------AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
                          AE  +    + G C  G + EA ++++++      L    YS LI
Sbjct: 540 PANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLI 599

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            G C+ G +  A    + + + G  PN  +   +I G    G + +A
Sbjct: 600 HGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEA 646



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 52/245 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   MI  G++P+   Y++LIDG C  G ++RA  L   M   G + +VVTY+ 
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSV 512

Query: 61  LINGYCKTKDVEESLNL------------------------------------------- 77
           LING  K+   +E+  L                                           
Sbjct: 513 LINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGL 572

Query: 78  -------YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
                  Y  +L +        Y+ L HG      V  AL    +M     A  +++  +
Sbjct: 573 MNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTIS 632

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            I GL + G +VEA ++ + L +  C L   EA   LID   K G ++   ++   + R 
Sbjct: 633 LIRGLFEKGMVVEADQVIQQL-LNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARD 691

Query: 190 GLMPN 194
           GL+P+
Sbjct: 692 GLLPS 696


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  174 bits (440), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 146/253 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E S+LL+ M++ G  P+ F Y+T++   C +G+ + A ++   M    C  +VVTYN+
Sbjct: 213 LEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNS 272

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   ++E+  L  +M+ +   PTV+TY TL  G     ++  A ++ ++M  + 
Sbjct: 273 LMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAG 332

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TYN  +DGLCK G + EA EL   +    C   +  YS L++GLCK+GK++ A 
Sbjct: 333 ISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDAR 392

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G  PN+VT+N MI GFC  G++D+ H +   M+     P+ VT++TL+ G 
Sbjct: 393 LLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGY 452

Query: 241 IRNNETSKVVELL 253
            + N       +L
Sbjct: 453 CKANRMQDAFAIL 465



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 146/260 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +LLD MIQ+   P+A VY+ LI G C  G+ID AR +   M    C+ +V+TY +
Sbjct: 108 IDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTS 167

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+T  ++E+  L  +M   G+ P  V YN L +GL + +Q+E   KL +EM  + 
Sbjct: 168 LIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T +YNT +  LC++G   EA ++   +   KC   +  Y+ L+DG CK+ K++ A 
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAE 287

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +      P V+TY  +I GF    ++  A+ +  DM   G++P+ VT+N L+ G 
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  +  +  ELL  M E++
Sbjct: 348 CKAGKLEEAHELLEVMVEKD 367



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 139/260 (53%), Gaps = 6/260 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LL++M++RG +PN   ++T+IDGFC  G++D   ++   M    C  +VVTY+T
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK   ++++  +       GI P   +Y+++  GL    +VE A ++ D M    
Sbjct: 448 LIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQG 501

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               +S Y   I GLC      EA ++ + +    CE  +  YS LI+GLCK  ++E A 
Sbjct: 502 CPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAI 561

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   G +P+V TY  +I GFC   +MD A+  F  M   G  P+ + +N L+ G 
Sbjct: 562 NVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGF 621

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++    K +E++  M E+ 
Sbjct: 622 CQSGNVEKAIEVMQLMLEKG 641



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 144/294 (48%), Gaps = 38/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L +M++R   P+   Y++LI G C T  +D AR+L   M  +G   + V YN 
Sbjct: 143 IDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNA 202

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   +EE   L  EM+  G  P   +YNT+   L E  + E A K+ ++M    
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC------------------------ 156
              +  TYN+ +DG CK   + EA  L   +   +C                        
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAY 322

Query: 157 -------ELGIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                  + GI      Y+CL+DGLCK GKLE A EL + +      P+VVTY+I+++G 
Sbjct: 323 RVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGL 382

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN---NETSKVVELLHRM 256
           C  G++D A  L   M  +G  PN VTFNT++ G  +    +E  KV+EL+  +
Sbjct: 383 CKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA RLL+ M+ R   P    Y+TLI GF     +  A  +   M   G   ++VTYN 
Sbjct: 283 MDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNC 342

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   +EE+  L   M+ K   P VVTY+ L +GL ++ +V+ A  L + M    
Sbjct: 343 LLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERG 402

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+NT IDG CK G + E  ++   ++ + C   +  YS LIDG CK  +++ A+
Sbjct: 403 CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAF 462

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +       G+ P+  +Y+ M+ G C+ G++++A ++   M  +G  P    +  ++ G 
Sbjct: 463 AIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGL 516

Query: 241 IRNNETSKVVELLHRMDERN 260
                  + +++L  M ER 
Sbjct: 517 CDVERGDEALKMLQVMSERG 536



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 121/239 (50%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P AF Y  LI G C    ID A +L   M    C  +   YN LI G CK   ++ + N+
Sbjct: 90  PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
              ML +   P V+TY +L  G  + + ++ A KL ++M+ S +  +T  YN  ++GLCK
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              + E ++L   +     E    +Y+ ++  LC+ GK E A ++ + +      P+VVT
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVT 269

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           YN ++ GFC   +MD+A  L  DM  +  AP  +T+ TL+ G  R +  +    ++  M
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 2/244 (0%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P+   Y  LI GF   G      E+   M       +V+T+NT++  YC+  D++ +L+
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            +   +     PT  TY  L HGL +  +++ A +L DEM   D   + + YN  I GLC
Sbjct: 81  HFRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G I  A  + + +    C   +  Y+ LI G C+   L+ A +L + +   GL P+ V
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            YN +++G C   Q+++   L  +M   G  P+  ++NT++     + +  +  ++L +M
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258

Query: 257 DERN 260
            E+ 
Sbjct: 259 IEKK 262



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 103/196 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+R+ D     G+ P+   YS++++G C TG+++ A+E+   M   GC      Y  +I
Sbjct: 454 KANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALII 513

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C  +  +E+L +   M  +G  P + TY+ L +GL +  +VE A+ + D M      
Sbjct: 514 GGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCV 573

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + +TY + IDG CK   +  A + F+T+R   CE    AY+ LI G C+ G +E A E+
Sbjct: 574 PDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEV 633

Query: 183 FQSLPRVGLMPNVVTY 198
            Q +   G  P+  TY
Sbjct: 634 MQLMLEKGCNPDAATY 649



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 91/170 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  ++DLM ++G  P +  Y+ +I G C     D A ++   M   GC  N+ TY+ 
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CKTK VE+++N+   ML KG  P V TY +L  G  +I++++ A + F  M+ S 
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
              +   YN  I G C++G + +A E+ + +    C      Y  L+  L
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 2/186 (1%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E  + + E  S   +P+  TY  L  G       +  L++ +EM     + +  T+NT +
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
              C+ G +  A   FR    + C      Y  LI GLC+  +++ A++L   + +    
Sbjct: 67  KAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P+   YN +I G C  G++D A ++   M  +   P+ +T+ +L++GC + N   +  +L
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 253 LHRMDE 258
           + +M E
Sbjct: 185 MEKMKE 190


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  173 bits (438), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 92/254 (36%), Positives = 148/254 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+ + M+QRGV P+   +S+++  F   GE+ RA   F  M   G + + V Y  LI
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 406

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC+  DV  +L + +EM+ +G    VVTYNTL +GL     ++ A +LF EM    V 
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 466

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T  T I G CK+G + +A  LF T+ +   +  +  Y+ L+DG CK+G++E A EL
Sbjct: 467 PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 526

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +    + P+ ++++I+I+GFC+ G + +A  L+ +M+ KG+ P  VT NT++ G +R
Sbjct: 527 WYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLR 586

Query: 243 NNETSKVVELLHRM 256
               SK  + L+ M
Sbjct: 587 AGNLSKANDFLNTM 600



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D M  +G++P  F Y+ LI+G C  G  +RA+ +   M   G   N  T+N 
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   C+ +DV E+  +++EML +G+ P +++++++        ++  AL  F++M+   
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T  Y   I+G C+N  +  A ++   +    C + +  Y+ L++GLC+   L+ A 
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF+ +   G+ P+  T   +IHG+C DG M KA  LF  M  + + P+ VT+NTLM G 
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514

Query: 241 IRNNETSKVVELLHRMDER 259
            +  E  K  EL + M  R
Sbjct: 515 CKVGEMEKAKELWYDMISR 533



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M++RGV P+ +  +TLI G+C  G + +A  LF +M +     +VVTYNT
Sbjct: 450 LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNT 509

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK  ++E++  L+ +M+S+ I P+ ++++ L +G   +  V  A +L+DEM+   
Sbjct: 510 LMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG 569

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T NT I G  + G + +A +   T+           Y+ LI+   K    + A+
Sbjct: 570 IKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 629

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L  ++   GL+PN+VTYN ++ GF   G+M +A  +   M  KG+ P+  T+ +L+ G 
Sbjct: 630 FLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGY 689

Query: 241 IRNNETSKVVELLHRMDER 259
           +  +   +   +   M +R
Sbjct: 690 VSKDNMKEAFRVHDEMLQR 708



 Score =  140 bits (354), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 140/256 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ + M++RG   +   Y+TL++G C    +D A ELF  M   G   +  T  TLI+
Sbjct: 418 ALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIH 477

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK  ++ ++L+L+  M  + ++P VVTYNTL  G  ++ ++E A +L+ +M   ++  
Sbjct: 478 GYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFP 537

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +++  I+G C  G + EA  L+  ++    +  +   + +I G  + G L  A +  
Sbjct: 538 SYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFL 597

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            ++   G+ P+ +TYN +I+ F  +   D+A  L  +ME +G+ PN VT+N ++ G  R+
Sbjct: 598 NTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRH 657

Query: 244 NETSKVVELLHRMDER 259
               +   +LH+M ++
Sbjct: 658 GRMQEAEMVLHKMIDK 673



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 128/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ +  ++ G   N +  + +++  C  G++D        M+  G   ++VTYNT
Sbjct: 205 VDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNT 264

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N YC+   V E+  L   M  KG++P + TYN L +GL +    E A ++ DEM    
Sbjct: 265 LVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVG 324

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +T+N  +   C+   + EA  +F  +        + ++S ++    + G+L  A 
Sbjct: 325 LCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRAL 384

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +  VGL+P+ V Y I+I+G+C +  +  A  +  +M  +G   + VT+NTL+ G 
Sbjct: 385 AYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGL 444

Query: 241 IRNNETSKVVELLHRMDER 259
            R        EL   M ER
Sbjct: 445 CRGKMLDDADELFKEMVER 463



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 123/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D     L  M ++GV  +   Y+TL++ +C  G +  A  L   M   G    + TYN 
Sbjct: 240 LDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNA 299

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK    E +  +  EML  G+ P   T+N +         V  A ++F+EM    
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRG 359

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  ++++ +    +NG +  A   F  ++ +        Y+ LI+G C+   +  A 
Sbjct: 360 VVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGAL 419

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G + +VVTYN +++G C    +D A +LF +M  +GV P+  T  TL+ G 
Sbjct: 420 KMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGY 479

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++   +K + L   M  R+
Sbjct: 480 CKDGNMTKALSLFETMTLRS 499



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 12/265 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E S    L+ +RG   +    + L+      G +D A +++     +G + NV T N 
Sbjct: 170 LREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNI 229

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  CK   ++      SEM  KG+   +VTYNTL +       V  A  L D M    
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI------EAYSCLIDGLCKIG 174
           +     TYN  I+GLCK G         R  RVL   LG+        ++ ++   C+  
Sbjct: 290 LKPGLFTYNALINGLCKEG------SYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKE 343

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            +  A  +F  + + G++P++++++ ++  F  +G++ +A   F  M+  G+ P+ V + 
Sbjct: 344 DVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYT 403

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
            L+ G  RN++ S  +++ + M ER
Sbjct: 404 ILINGYCRNDDVSGALKMRNEMVER 428



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 110/235 (46%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           V+  LI  +    ++    E F  +   G   ++   N L+    K   V+ +  +Y + 
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           +  G    V T N + + L +  ++++      EM+   V A+  TYNT ++  C+ G +
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            EA  L   +     + G+  Y+ LI+GLCK G  E A  +   +  VGL PN  T+N M
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   C    + +A  +F +M  +GV P+ ++F++++    RN E  + +    +M
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM 390



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  L++ M +RG+ PN   Y+ ++ GF   G +  A  +   M   G   +  TY +L
Sbjct: 626 DRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSL 685

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRP 88
           INGY    +++E+  ++ EML +G  P
Sbjct: 686 INGYVSKDNMKEAFRVHDEMLQRGFVP 712


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  173 bits (438), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/260 (37%), Positives = 147/260 (56%), Gaps = 9/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L ++++  ++PN   Y+TLIDG+        A+ +F ++ + G   +V +YN 
Sbjct: 289 VKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVWSYNI 340

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK K VEE+LNLY EM  K + P  VTYN+L  GL +  ++ +A  L DEM    
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRG 400

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG-LCKIGKLETA 179
             A   TYN+ I+GLCKNG + +A  L   ++    +  +   + L+ G LCK  +L+ A
Sbjct: 401 HHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNA 460

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LFQ L   G  PNV TYNI+I+G C +G +D+A+ L   ME  G +PN +TF  ++  
Sbjct: 461 QGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICA 520

Query: 240 CIRNNETSKVVELLHRMDER 259
            +   ET K  +LL  M  R
Sbjct: 521 LLEKGETDKAEKLLCEMIAR 540



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 145/318 (45%), Gaps = 62/318 (19%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  +++ G +P+    +TLI G CL G++ +A      +   G   + V+Y TLIN
Sbjct: 117 AFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLIN 176

Query: 64  GYCKT-----------------------------------KDVEESLNLYSEMLSKGIRP 88
           G CK                                    K V E+ NL+SEM  KGI  
Sbjct: 177 GVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISA 236

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE----- 143
            VVTY+ + HG   + ++  AL   +EM    +  +   YNT +D L K G + E     
Sbjct: 237 NVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVL 296

Query: 144 ----------------------AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                                 A  +F  + ++     + +Y+ +I+ LCKI ++E A  
Sbjct: 297 AVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALN 356

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L++ + +  ++PN VTYN +I G C  G++  A DL  +M  +G   N +T+N+L+ G  
Sbjct: 357 LYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLC 416

Query: 242 RNNETSKVVELLHRMDER 259
           +N +  K + L+++M ++
Sbjct: 417 KNGQLDKAIALINKMKDQ 434



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 3/235 (1%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           SR L+L   + ++P+ F  + LI+ FC  G+I+ A  +   +   G   + VT  TLI G
Sbjct: 86  SRRLEL---KAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKG 142

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
            C    V+++L+ + ++L++G R   V+Y TL +G+ +I +   A++L   +        
Sbjct: 143 LCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPN 202

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
              YNT ID LCK   + EA  LF  + V      +  YS +I G C +GKL  A     
Sbjct: 203 VVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLN 262

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +    + P+V  YN ++     +G++ +A ++   +    + PN +T+NTL+ G
Sbjct: 263 EMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDG 317



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 36/227 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   M Q+ + PN   Y++LIDG C +G I  A +L   M   G   NV+TYN+
Sbjct: 351 VEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNS 410

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQVEHALKLFDEMQHS 119
           LING CK   +++++ L ++M  +GI+P + T N L HGL  +  ++++A  LF ++   
Sbjct: 411 LINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDK 470

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TYN  I G CK G                                    L+ A
Sbjct: 471 GYHPNVYTYNIIIYGHCKEGL-----------------------------------LDEA 495

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           + L   +   G  PN +T+ I+I      G+ DKA  L  +M A+G+
Sbjct: 496 YALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 105/220 (47%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P    ++ ++D F           L   +++     +  T N LIN +C    +  + ++
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            S++L  G +P  VT  TL  GL    QV+ AL   D++       +  +Y T I+G+CK
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G    A +L R +     E  +  Y+ +ID LCK   +  A  LF  +   G+  NVVT
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           Y+ +IHGFC  G++ +A     +M  K + P+   +NTL+
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 5/205 (2%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           ++ +N +++ + K K     ++L   +  K I+P   T N L +    + Q+  A  +  
Sbjct: 63  IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLS 122

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++       +T T  T I GLC  G + +A      L      L   +Y  LI+G+CKIG
Sbjct: 123 KILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIG 182

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +   A +L + +      PNVV YN +I   C    + +A +LF +M  KG++ N VT++
Sbjct: 183 ETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYS 242

Query: 235 TLMLG-CIRNNETSKVVELLHRMDE 258
            ++ G CI      K+ E L  ++E
Sbjct: 243 AIIHGFCI----VGKLTEALGFLNE 263



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 5/175 (2%)

Query: 88  PTVVTYNTLFHGL---FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           P++   ++ FH     FE   V+ AL  F  M           +N  +D   K  +    
Sbjct: 25  PSLPKLHSHFHSRPPSFE--NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTV 82

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             L R L +   +      + LI+  C +G++  A+ +   + + G  P+ VT   +I G
Sbjct: 83  VSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKG 142

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            C  GQ+ KA      + A+G   + V++ TL+ G  +  ET   ++LL R+D R
Sbjct: 143 LCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGR 197


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  173 bits (438), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 139/239 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 187 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P++ TY ++I+ FC  G + K   L  +M+  G AP+ VT+N LM G
Sbjct: 367 KMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 127 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 186

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 187 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 246

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 307 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 367 KMLREM 372



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 116/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y ++L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 123 FYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  173 bits (438), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 147/258 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL+DLM + G RP+   Y+ LI G CL G+ D A +L   M   G   N  TYNTL+
Sbjct: 502 KAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLL 561

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   ++++ +++ EMLS GI P VVTYNT+ HGLF+  +   A +L+  M  S   
Sbjct: 562 HGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQ 621

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  ++GL KN  + EA ++F++L     ++ I  ++ +I  L K G+ E A  L
Sbjct: 622 WSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNL 681

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P+V TY ++      +G +++   +F +ME  G APN +  N L+   + 
Sbjct: 682 FATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLL 741

Query: 243 NNETSKVVELLHRMDERN 260
             + S+    L ++DE+N
Sbjct: 742 RGDISRAGAYLSKIDEKN 759



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E    LDLM+  G+ PN ++++ +   F     I  A ++F  M   G   NVV Y T
Sbjct: 360 LSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYAT 419

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V+++   +++M+++G+ P +V + +L +GL  I + E A +LF EM +  
Sbjct: 420 LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG 479

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      +NT +  LC  G +++A  L   +  +     I +Y+ LI G C +GK + A 
Sbjct: 480 IHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEAS 539

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +  VGL PN  TYN ++HG+C DG++D A+ +F +M + G+ P  VT+NT++ G 
Sbjct: 540 KLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGL 599

Query: 241 IRNNETSKVVELLHRM 256
            +    S+  EL   M
Sbjct: 600 FKTRRFSEAKELYLNM 615



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 136/293 (46%), Gaps = 38/293 (12%)

Query: 2   DEASRLLDLMIQRGVR---PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +EA  LL +M    VR   PN   Y+T+I+GF   G++D+A  LF+ M   G   NVVTY
Sbjct: 183 EEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTY 242

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
             +I+G CK + V+ +  ++ +M+ KG+RP +VTY  L HG   I Q +  +++  EM  
Sbjct: 243 TIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSA 302

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE- 177
             +  +  TY   +D LCK G   EA +LF ++     +  +  Y  ++ G    G L  
Sbjct: 303 HGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSE 362

Query: 178 ----------------------------------TAWELFQSLPRVGLMPNVVTYNIMIH 203
                                              A ++F  + + GL PNVV Y  +I 
Sbjct: 363 MHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLID 422

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             C  G++D A   F  M  +GVAPN V F +L+ G    ++  K  EL   M
Sbjct: 423 ALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEM 475



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 3/256 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---DINGCMHNVVTYNTLIN 63
           LL  M + G  PN   Y+TL+ GFC     + A EL   M    +  C  N+V+YNT+IN
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+     V+++ NL+ +M  +GI P VVTY  +  GL +   V+ A  +F +M    V  
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRP 272

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   I G    G   E   + + +     E     Y  L+D LCK GK   A +LF
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF 332

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            S+ R G+ P+V  Y I++HG+   G + + H     M   G++PN   FN +     + 
Sbjct: 333 DSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKK 392

Query: 244 NETSKVVELLHRMDER 259
               + +++ ++M ++
Sbjct: 393 AMIGEAMDIFNKMRQQ 408



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 35/190 (18%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID------------------------ 37
           DEAS+LLD+M+  G++PN   Y+TL+ G+C  G ID                        
Sbjct: 536 DEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTI 595

Query: 38  -----------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                       A+EL+++M  +G   ++ TYN ++NG  K   V+E+L ++  + SK +
Sbjct: 596 LHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDL 655

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           +  ++T+N +   L +  + E A+ LF  +  + +  + +TY    + L + G + E   
Sbjct: 656 QVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDG 715

Query: 147 LFRTLRVLKC 156
           +F  +    C
Sbjct: 716 MFSEMEKSGC 725



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 86/239 (35%), Gaps = 84/239 (35%)

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGL--CKNGYIVEAAELF-----RTLR--VLK 155
            V+ ALKLFDE  H    A    +N  +  +           +EL      R +R    K
Sbjct: 30  SVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSK 89

Query: 156 CELGIEAYSCLIDGLCKIGKLE-----------TAWE----------------------- 181
               +  YS L+   C++G+LE           T W                        
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 182 ---LFQSLPRVGLMPNVVTYNIMIHGFCN------------------------------- 207
              L + +  +G  PNVV+YN ++ GFC+                               
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 208 -------DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
                  +GQ+DKA++LFLDM  +G+ PN VT+  ++ G  +     +   +  +M ++
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  172 bits (437), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 139/239 (58%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M  +G +PN + Y+ L+DGFC  G+ID A  L   M  +G   N V +N LI+
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLIS 461

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK   + E++ ++ EM  KG +P V T+N+L  GL E+ +++HAL L  +M    V A
Sbjct: 462 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 521

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            T TYNT I+   + G I EA +L   +      L    Y+ LI GLC+ G+++ A  LF
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           + + R GL+P+ ++ NI+I+G C  G +++A +   +M  +G  P+ VTFN+L+ G  R
Sbjct: 582 EKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 640



 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 140/239 (58%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL+ M   G++PN   ++ LI  FC    I  A E+F  M   GC  +V T+N+
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+  +++ +L L  +M+S+G+    VTYNTL +      +++ A KL +EM    
Sbjct: 494 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
              +  TYN+ I GLC+ G + +A  LF   ++L+  L   + SC  LI+GLC+ G +E 
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFE--KMLRDGLVPSSISCNILINGLCRSGMVEE 611

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A E  + +   G  P++VT+N +I+G C  G+++    +F  ++A+G+ P+ VT+NTLM
Sbjct: 612 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLM 670



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 138/288 (47%), Gaps = 32/288 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L  M + G  PN+ +Y TLI        ++ A +L   M + GC+ +  T+N 
Sbjct: 227 VDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 286

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF------- 113
           +I G CK   + E+  + + ML +G  P  +TY  L +GL +I +V+ A  LF       
Sbjct: 287 VILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPT 346

Query: 114 -------------------------DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                                    D +    +  +  TYN+ I G  K G +  A E+ 
Sbjct: 347 SVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVL 406

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           R +R   C+  + +Y+ L+DG CK+GK++ A+ L   +   GL PN V +N +I  FC +
Sbjct: 407 RDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKE 466

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            ++ +A ++F +M  KG  P+  TFN+L+ G    +E    + LL  M
Sbjct: 467 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 514



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 32/288 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF------VSMDINGCMH- 53
           ++EA+++++ M+ RG  P+   Y  L++G C  G +D A++LF       S+  N  +H 
Sbjct: 297 INEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHG 356

Query: 54  -------------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
                                    +V TYN+LI GY K   V  +L +  +M +KG +P
Sbjct: 357 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKP 416

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            V +Y  L  G  ++ +++ A  L +EM    +   T  +N  I   CK   I EA E+F
Sbjct: 417 NVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 476

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           R +    C+  +  ++ LI GLC++ +++ A  L + +   G++ N VTYN +I+ F   
Sbjct: 477 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 536

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G++ +A  L  +M  +G   + +T+N+L+ G  R  E  K   L  +M
Sbjct: 537 GEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 127/237 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M ++G +P+ + +++LI G C   EI  A  L   M   G + N VTYNT
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN + +  +++E+  L +EM+ +G     +TYN+L  GL    +V+ A  LF++M    
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   + + N  I+GLC++G + EA E  + + +      I  ++ LI+GLC+ G++E   
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +F+ L   G+ P+ VTYN ++   C  G +  A  L  +    G  PN  T++ L+
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILL 705



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 124/281 (44%), Gaps = 32/281 (11%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ R + P  F +  ++   C   E+D A  +   M  +GC+ N V Y TLI+   K   
Sbjct: 202 MLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNR 261

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L L  EM   G  P   T+N +  GL +  ++  A K+ + M       +  TY  
Sbjct: 262 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGY 321

Query: 131 FIDGLCKNGYIVEAAELF----------------------------RTLRVLKCELGIEA 162
            ++GLCK G +  A +LF                              L  +    GI  
Sbjct: 322 LMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 381

Query: 163 ----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               Y+ LI G  K G +  A E+ + +   G  PNV +Y I++ GFC  G++D+A++L 
Sbjct: 382 DVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLL 441

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +M A G+ PN V FN L+    + +   + VE+   M  +
Sbjct: 442 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 482



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 109/213 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  LL  MI  GV  N   Y+TLI+ F   GEI  AR+L   M   G + + +TYN+
Sbjct: 504 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNS 563

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+  +V+++ +L+ +ML  G+ P+ ++ N L +GL     VE A++   EM    
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+N+ I+GLC+ G I +   +FR L+          Y+ L+  LCK G +  A 
Sbjct: 624 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDAC 683

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
            L       G +PN  T++I++        +D+
Sbjct: 684 LLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 13/256 (5%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNT---- 60
           RLL  M   G+     ++ +++  +   G   +   L + M ++  C     +YN     
Sbjct: 126 RLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 185

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C     + + N++ +MLS+ I PT+ T+  +   L  +++V+ AL +  +M    
Sbjct: 186 LVSGNCH----KVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHG 241

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               +  Y T I  L K   + EA +L   + ++ C    E ++ +I GLCK  ++  A 
Sbjct: 242 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 301

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G  P+ +TY  +++G C  G++D A DLF  +      P  V FNTL+ G 
Sbjct: 302 KMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGF 357

Query: 241 IRNNETSKVVELLHRM 256
           + +        +L  M
Sbjct: 358 VTHGRLDDAKAVLSDM 373


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 141/237 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  ++ +MI+RG +P+   Y+ L++G+CL+G +  A+++F  M     + NV++Y T
Sbjct: 297 VSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCT 356

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK + V+E++ L +EM +K + P  VTYN L  GL +  +  +   L + M+ S 
Sbjct: 357 LINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASG 416

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TYN  +D   K+    +A  LF+ +  +     I  Y+ L+DGLCK G+L+ A 
Sbjct: 417 QPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAK 476

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E+FQ L   G  PN+ TYNIMIHG C +G +D+A  L   M      PN +TF+T++
Sbjct: 477 EIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 141/258 (54%), Gaps = 1/258 (0%)

Query: 4   ASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           A +LLD M+ RG V P+ + ++ LIDG C  G +  A  +   M   G   ++V+YN L+
Sbjct: 264 AVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALM 323

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC +  V E+  ++ +M+ +   P V++Y TL +G  ++  V+ A+ L  EM + ++ 
Sbjct: 324 NGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLV 383

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TYN  +DGL K+G  +   +L   +R       +  Y+ L+D   K  K + A  L
Sbjct: 384 PDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALAL 443

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +  +G+ PN+ TYNI++ G C  G++  A ++F  + AKG  PN  T+N ++ G  +
Sbjct: 444 FQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCK 503

Query: 243 NNETSKVVELLHRMDERN 260
                +   LL++M   N
Sbjct: 504 EGFLDEAEALLYKMVNNN 521



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 136/255 (53%), Gaps = 1/255 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL   + RG R +   Y T+I+G C  G+   A ++F  M       N++ YNT+I
Sbjct: 158 EAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVI 217

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDV 121
           +G CK   V+E+  L +EM+  GI   V +YN++ HG   + + + A+KL DEM     V
Sbjct: 218 DGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKV 277

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T+N  IDGLCK G + EA  +   +     +  I +Y+ L++G C  G +  A +
Sbjct: 278 YPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQ 337

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  +     +PNV++Y  +I+G+C    +D+A  L  +M  K + P+ VT+N L+ G  
Sbjct: 338 VFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLS 397

Query: 242 RNNETSKVVELLHRM 256
           ++  +    +L+  M
Sbjct: 398 KSGRSLYEWDLVEAM 412



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 130/245 (53%), Gaps = 1/245 (0%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++P+   +S LI+ F   G++  A  L  ++   G   +V    TL+ G C    V E++
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           +L  E + +G R   V Y T+ +GL +I +   A+++F +M+   V      YNT IDGL
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF-QSLPRVGLMPN 194
           CK G + EA  L   +     EL + +Y+ +I G C +G+ + A +L  + + R  + P+
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T+NI+I G C  G++ +A+++   M  +G  P+ V++N LM G   +    +  ++  
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 255 RMDER 259
           +M ER
Sbjct: 341 KMVER 345



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 132/261 (50%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  LL  +++ G + +  + +TL+ G CL G +  A  L       G   + V Y T
Sbjct: 121 MGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGT 180

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK     +++ ++ +M    + P ++ YNT+  GL +   V+ A  L  EM  + 
Sbjct: 181 IINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENG 240

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-KCELGIEAYSCLIDGLCKIGKLETA 179
           +  +  +YN+ I G C  G    A +L   + V  K    +  ++ LIDGLCK+G++  A
Sbjct: 241 IELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEA 300

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + +   + + G  P++V+YN +++G+C  G + +A  +F  M  +   PN +++ TL+ G
Sbjct: 301 YNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLING 360

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +     + + LL  M  +N
Sbjct: 361 YCKVRMVDEAMVLLTEMHNKN 381



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 57/100 (57%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   +I+ G+ PN   Y+ L+DG C +G +  A+E+F  +   GC  N+ TYN +
Sbjct: 438 DKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIM 497

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
           I+G CK   ++E+  L  +M++    P  +T++T+   + 
Sbjct: 498 IHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  ++  M+  GV P+   Y+++I G CL  ++  A ++F  M   G + N+VTY++
Sbjct: 298 ISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSS 357

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CKTK++ ++L L  EM++ G+ P VVT++TL  G  +  + E A +LF  M   D
Sbjct: 358 LIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHD 417

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T    +DGL K  +  EA  LFR +  +  EL +  Y+ ++DG+C  GKL  A 
Sbjct: 418 QHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQ 477

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  LP  G+  +VV Y  MI G C +G +D A +L + ME  G  PN  T+N  + G 
Sbjct: 478 ELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL 537

Query: 241 IRNNETSKVVELLHRMDER 259
           ++  + S+  + L  M  +
Sbjct: 538 LQRYDISRSTKYLLLMKGK 556



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 36/290 (12%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L +M + GV P    ++TLI+G C  G + RA     S++  G   N  TY  +ING C
Sbjct: 128 VLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLC 187

Query: 67  KTKDVE------------------------------------ESLNLYSEMLSKGIRPTV 90
           K  D                                      E+LNL+S M SKGI+P +
Sbjct: 188 KAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDL 247

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           V YN+L HGL    + + A  L   M    +     T+N  +D  CK+G I  A  +   
Sbjct: 248 VAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGF 307

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +  +  E  +  Y+ +I G C + ++  A ++F+ +   G +PN+VTY+ +IHG+C    
Sbjct: 308 MVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKN 367

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++KA  L  +M   G+ P+ VT++TL+ G  +  +     EL   M E +
Sbjct: 368 INKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHD 417



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 126/249 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A ++ +LMI +G  PN   YS+LI G+C T  I++A  L   M  +G   +VVT++T
Sbjct: 333 MGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWST 392

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK    E +  L+  M      P + T   +  GLF+      A+ LF EM+  +
Sbjct: 393 LIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMN 452

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      YN  +DG+C  G + +A ELF  L     ++ + AY+ +I GLCK G L+ A 
Sbjct: 453 LELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAE 512

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G +PN  TYN+ + G      + ++    L M+ KG++ +  T   L+   
Sbjct: 513 NLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYF 572

Query: 241 IRNNETSKV 249
             N E S +
Sbjct: 573 SANKENSAL 581



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 94/189 (49%), Gaps = 1/189 (0%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   +V T   +IN  C         ++   M   G+ PTVVT+ TL +GL     V  A
Sbjct: 101 GIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARA 160

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLID 168
            +  D ++     + + TY   I+GLCK G    A      ++   C+L +  AYS ++D
Sbjct: 161 ARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMD 220

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
            LCK G +  A  LF  +   G+ P++V YN +IHG CN G+  +A  L  +M  KG+ P
Sbjct: 221 SLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMP 280

Query: 229 NCVTFNTLM 237
           N  TFN L+
Sbjct: 281 NVQTFNVLV 289



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/224 (20%), Positives = 82/224 (36%), Gaps = 36/224 (16%)

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K  E +L+ + +M+     P    +  LF  + ++      + L   +    +  +  T 
Sbjct: 50  KSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTL 109

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              I+ LC   + V    +   +  +  +  +  ++ LI+GLC  G +  A     SL  
Sbjct: 110 TIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLED 169

Query: 189 VGLMPNVVTYNIMIHG------------------------------------FCNDGQMD 212
           +G   N  TY  +I+G                                     C DG + 
Sbjct: 170 MGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVC 229

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +A +LF  M +KG+ P+ V +N+L+ G        +   LL  M
Sbjct: 230 EALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNM 273



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 65/154 (42%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           E AL  F +M   +       +      + K  +      L + +  L  +  +   + +
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           I+ LC +      + +   + ++G+ P VVT+  +I+G C +G + +A      +E  G 
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             N  T+  ++ G  +  +TS  +  L ++  RN
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRN 206


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 146/253 (57%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +++D+M+Q G  P+ F Y+ +++  C  G+++ A+ +   M   GC+ ++ T+NTLI 
Sbjct: 309 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIV 368

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    +EE+L+L  ++  KG+ P V T+N L + L ++   + AL+LF+EM+ S    
Sbjct: 369 ALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT ID LC  G + +A +L + +    C      Y+ +IDGLCK  ++E A E+F
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF 488

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  N +T+N +I G C D ++D A+ L   M ++G+ PN +T+N+++    + 
Sbjct: 489 DQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQ 548

Query: 244 NETSKVVELLHRM 256
            +  K  ++L  M
Sbjct: 549 GDIKKAADILQTM 561



 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L+ M++RG  P+   ++TLI   C    ++ A +L   + + G   +V T+N 
Sbjct: 341 LEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNI 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK  D + +L L+ EM S G  P  VTYNTL   L  + ++  AL L  EM+ + 
Sbjct: 401 LINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYNT IDGLCK   I EA E+F  + +         ++ LIDGLCK  +++ A 
Sbjct: 461 CPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDAN 520

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL PN +TYN ++  +C  G + KA D+   M A G   + VT+ TL+ G 
Sbjct: 521 QLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGL 580

Query: 241 IRNNETSKVVELLHRM 256
            +   T   ++LL  M
Sbjct: 581 CKAGRTQVALKLLRGM 596



 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 131/254 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L+ M   GV P+   ++TL+ GF   G I  A  +   M   GC    VT N LIN
Sbjct: 204 AVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLIN 263

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK   VE++L    + ++ G  P  +TYNT  +GL +   V HALK+ D M       
Sbjct: 264 GYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP 323

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ++ LCKNG + EA  +   +    C   I  ++ LI  LC   +LE A +L 
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLA 383

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   GL P+V T+NI+I+  C  G    A  LF +M++ G  P+ VT+NTL+      
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443

Query: 244 NETSKVVELLHRMD 257
            +  K ++LL  M+
Sbjct: 444 GKLGKALDLLKEME 457



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 130/245 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I  G  P+   Y+T ++G C  G +  A ++   M   G   +V TYN ++N  CK   +
Sbjct: 282 IANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 341

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           EE+  + ++M+ +G  P + T+NTL   L   +++E AL L  ++    ++ +  T+N  
Sbjct: 342 EEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNIL 401

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+ LCK G    A  LF  ++   C      Y+ LID LC +GKL  A +L + +   G 
Sbjct: 402 INALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGC 461

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             + VTYN +I G C   ++++A ++F  M+ +G++ N +TFNTL+ G  ++       +
Sbjct: 462 PRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQ 521

Query: 252 LLHRM 256
           L+ +M
Sbjct: 522 LISQM 526



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 124/242 (51%), Gaps = 1/242 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  M   G   +   Y+T+IDG C    I+ A E+F  MD+ G   N +T+NT
Sbjct: 446 LGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 505

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK K ++++  L S+M+S+G++P  +TYN++     +   ++ A  +   M  + 
Sbjct: 506 LIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANG 565

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK G    A +L R +R+       +AY+ +I  L +      A 
Sbjct: 566 FEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAM 625

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +  VG  P+  TY I+  G C   G + +A D  L+M  KG  P   +F  L  G
Sbjct: 626 NLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEG 685

Query: 240 CI 241
            +
Sbjct: 686 LL 687



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 123/239 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RL + M   G  P+   Y+TLID  C  G++ +A +L   M+  GC  + VTYNT+I+
Sbjct: 414 ALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIID 473

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   +EE+  ++ +M  +GI    +T+NTL  GL +  +++ A +L  +M    +  
Sbjct: 474 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQP 533

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ +   CK G I +AA++ +T+     E+ +  Y  LI+GLCK G+ + A +L 
Sbjct: 534 NNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLL 593

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           + +   G+      YN +I           A +LF +M   G  P+  T+  +  G  R
Sbjct: 594 RGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCR 652



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 130/254 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R+   M++ G  P     + LI+G+C  G ++ A         NG   + +TYNT +N
Sbjct: 239 ALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVN 298

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C+   V  +L +   M+ +G  P V TYN + + L +  Q+E A  + ++M       
Sbjct: 299 GLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLP 358

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           + +T+NT I  LC    + EA +L R + +      +  ++ LI+ LCK+G  + A  LF
Sbjct: 359 DITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLF 418

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G  P+ VTYN +I   C+ G++ KA DL  +ME+ G   + VT+NT++ G  + 
Sbjct: 419 EEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKK 478

Query: 244 NETSKVVELLHRMD 257
               +  E+  +MD
Sbjct: 479 MRIEEAEEVFDQMD 492



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 129/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +RG++P+   ++TL+   C   ++  A  +   M  +G   +  T+ TL+ G+ +   
Sbjct: 176 MGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGS 235

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +L + + ML  G  PT VT N L +G  ++ +VE AL    +   +    +  TYNT
Sbjct: 236 IKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNT 295

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F++GLC+NG++  A ++   +     +  +  Y+ +++ LCK G+LE A  +   +   G
Sbjct: 296 FVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERG 355

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +P++ T+N +I   C+  ++++A DL   +  KG++P+  TFN L+    +  +    +
Sbjct: 356 CLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLAL 415

Query: 251 ELLHRM 256
            L   M
Sbjct: 416 RLFEEM 421



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 107/210 (50%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   + V YN L+N   +   ++    +YSEM  +GI+P VVT+NTL   L   HQV  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + + +EM  S VA + +T+ T + G  + G I  A  +   +  + C       + LI+G
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            CK+G++E A    Q     G  P+ +TYN  ++G C +G +  A  +   M  +G  P+
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             T+N ++    +N +  +   +L++M ER
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVER 354



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 118/242 (48%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++ +  VY+ L++      ++     ++  M   G   +VVT+NTL+   C+   V  +
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + +  EM S G+ P   T+ TL  G  E   ++ AL++   M     +    T N  I+G
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK G + +A    +       E     Y+  ++GLC+ G +  A ++   + + G  P+
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYNI+++  C +GQ+++A  +   M  +G  P+  TFNTL++     N   + ++L  
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 255 RM 256
           ++
Sbjct: 385 QV 386



 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 35/70 (50%)

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
           P  G+  + V YN +++      +M     ++ +M  +G+ P+ VTFNTLM    R ++ 
Sbjct: 142 PLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQV 201

Query: 247 SKVVELLHRM 256
              V +L  M
Sbjct: 202 RTAVLMLEEM 211



 Score = 40.0 bits (92), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 59/165 (35%), Gaps = 42/165 (25%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ +L  M   G   +   Y TLI+G C  G    A +L   M I G       YN 
Sbjct: 551 IKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNP 610

Query: 61  LINGYCKTKDVEESLNLYSEM------------------------------------LSK 84
           +I    +  +  +++NL+ EM                                    + K
Sbjct: 611 VIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDK 670

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFD------EMQHSDVAA 123
           G  P   ++  L  GL  +   ++ ++  +      ++  SDV+A
Sbjct: 671 GFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDVSA 715


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 146/251 (58%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++  G   +   Y TLI G C  GE   A +L   +D      N V YNT+I G CK 
Sbjct: 149 DKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKD 208

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V ++ +LYSEM+SKGI P VVTY+ L  G F + +++ A+ LF+++   ++  +  T+
Sbjct: 209 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTF 268

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  +DG CK+  + E   +F  +        +  Y+ L+DG C + ++ TA  +F ++ +
Sbjct: 269 NILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQ 328

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P++ +YNI+I+GFC   ++DKA +LF +M  K + PN VT+N+L+ G  ++   S 
Sbjct: 329 GGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISY 388

Query: 249 VVELLHRMDER 259
            ++L+ +M +R
Sbjct: 389 ALQLVDQMHDR 399



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 140/279 (50%), Gaps = 20/279 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + +I   ++P+ + ++ L+DGFC   ++   + +F  M   G + +VVTYN+
Sbjct: 246 LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNS 305

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC  K+V  + ++++ M   G+ P + +YN L +G  +I +V+ A+ LF+EM   +
Sbjct: 306 LMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKN 365

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ IDGL K+G I  A +L   +        I  Y+ +ID L K  +++ A 
Sbjct: 366 IIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAI 425

Query: 181 ELFQSLPRVGLMPN--------------------VVTYNIMIHGFCNDGQMDKAHDLFLD 220
            L       G+ P+                    V TYN+MIHGFC  G  D+A  L   
Sbjct: 426 ALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSK 485

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           M+     PN VT+   +   + NNE  K  +L   M  R
Sbjct: 486 MKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITR 524



 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 131/246 (53%), Gaps = 20/246 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E   +  +M+++G+ P+   Y++L+DG+CL  E++ A+ +F +M   G   ++ +YN 
Sbjct: 281 MKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNI 340

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K V++++NL++EM  K I P VVTYN+L  GL +  ++ +AL+L D+M    
Sbjct: 341 LINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 400

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI------- 173
           V     TYN+ ID L K   + +A  L    +    +  +  Y+ LIDGLCK+       
Sbjct: 401 VPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITV 460

Query: 174 -------------GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
                        G  + A  L   +     +PN VTY I I    ++ + DKA  LF +
Sbjct: 461 NTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFRE 520

Query: 221 MEAKGV 226
           M  +G+
Sbjct: 521 MITRGL 526



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 128/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+ +G+ PN   YS LI GF + G++  A +LF  + +     +  T+N 
Sbjct: 211 VNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNI 270

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK + ++E   +++ M+ +GI P VVTYN+L  G   + +V  A  +F+ M    
Sbjct: 271 LVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGG 330

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +YN  I+G CK   + +A  LF  +        +  Y+ LIDGL K G++  A 
Sbjct: 331 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYAL 390

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G+ PN++TYN +I       Q+DKA  L    + +G+ P+  T+  L+ G
Sbjct: 391 QLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 449



 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 120/243 (49%), Gaps = 4/243 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + ++++   P AF ++ ++     +        L   M+  G   N+   N 
Sbjct: 67  VDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 61  LINGYCKTK----DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           LI  +C+       + ++   + ++++ G     V+Y TL HGL ++ +   AL L   +
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 186

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               V      YNT I G+CK+ ++ +A +L+  +        +  YS LI G   +GKL
Sbjct: 187 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL 246

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A +LF  +    + P+  T+NI++ GFC D +M +   +F  M  +G+ P+ VT+N+L
Sbjct: 247 KDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSL 306

Query: 237 MLG 239
           M G
Sbjct: 307 MDG 309



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 4/207 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N ++Y++    +    DV+++++L++ +L +   P    +N +   L +       L L 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYI---VEAAELFR-TLRVLKCELGIEAYSCLIDG 169
            +M+   +       N  I   C+ G I   +  A LF   L  L   L   +Y  LI G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK+G+   A +L Q +    +  N V YN +I+G C D  ++ A DL+ +M +KG++PN
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            VT++ L+ G     +    ++L +++
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKI 256



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 20/145 (13%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---FVSMDINGCMHN------ 54
           A +L+D M  RGV PN   Y+++ID    T ++D+A  L   F    I   M+       
Sbjct: 389 ALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILID 448

Query: 55  -----------VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI 103
                      V TYN +I+G+CK    +E+L+L S+M      P  VTY      L + 
Sbjct: 449 GLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDN 508

Query: 104 HQVEHALKLFDEMQHSDVAAETSTY 128
           ++ + A KLF EM    +   +++Y
Sbjct: 509 NENDKAEKLFREMITRGLLNRSASY 533


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 144/257 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L +M+++G++P+   Y++L+DG+CL  E++ A+ +  +M   G    V +YN +I
Sbjct: 298 EAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVI 357

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K V++++ L+ EM  K I P V+TYN+L  GL +  ++ +AL+L D M      
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQ 417

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY++ +D LCKN  + +A  L   L+       +  Y+ LIDGLCK G+LE A  +
Sbjct: 418 PDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNI 477

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L   G    V TY +MI GFC+ G  D+A  L   M+     P+ +T+  ++     
Sbjct: 478 FEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFD 537

Query: 243 NNETSKVVELLHRMDER 259
            +E  K  +LL  M  R
Sbjct: 538 KDENDKAEKLLREMITR 554



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 137/260 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + M    + P+ + ++ L+D FC  G +  A+     M   G   ++VTYN+
Sbjct: 261 LKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNS 320

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC   +V  + ++ + M  +G+  TV +YN + +G  +I  V+ A+KLF EM H  
Sbjct: 321 LMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ 380

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ IDGLCK+G I  A EL   +     +  I  YS ++D LCK   ++ A 
Sbjct: 381 IFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAI 440

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   L   G+ PN+ TY I+I G C  G+++ A ++F D+  KG      T+  ++ G 
Sbjct: 441 ALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGF 500

Query: 241 IRNNETSKVVELLHRMDERN 260
             +    + + LL +M + +
Sbjct: 501 CSHGLFDEALSLLSKMKDNS 520



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 139/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    D ++  G   +   Y TLI+G C  GE   A EL   +D      +VV Y+T+I
Sbjct: 158 QALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTII 217

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K+V ++ +LYSEM+S+ I   +VTY+ L  G   + +++ A+ LF++M   ++ 
Sbjct: 218 DSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENIN 277

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +D  CK G + EA      +     +  I  Y+ L+DG C + ++  A  +
Sbjct: 278 PDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSI 337

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++   G+   V +YNI+I+GFC    +D+A  LF +M  K + PN +T+N+L+ G  +
Sbjct: 338 LNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCK 397

Query: 243 NNETSKVVELLHRMDER 259
           +   S  +EL+  M +R
Sbjct: 398 SGRISYALELIDLMHDR 414



 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 132/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+ R +  N   YS LI GFC+ G++  A  LF  M       +V T+N 
Sbjct: 226 VNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +CK   V+E+ N  + M+ +GI+P +VTYN+L  G   +++V  A  + + M H  
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   +YN  I+G CK   + +A +LF+ +   +    +  Y+ LIDGLCK G++  A 
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           EL   +   G  P+++TY+ ++   C +  +DKA  L + ++ +G+ PN  T+  L+ G
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 133/253 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L   M  RG++PN   ++ LI+ FC  G I  A  +   +   G   + +T NT I G+C
Sbjct: 92  LFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC 151

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               + ++LN + ++++ G     V+Y TL +GL ++ +   AL+L   +    V  +  
Sbjct: 152 LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVV 211

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y+T ID +CK+  + +A +L+  +   +    I  YS LI G C +GKL+ A  LF  +
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
               + P+V T+NI++  FC +G++ +A +    M  +G+ P+ VT+N+LM G    NE 
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331

Query: 247 SKVVELLHRMDER 259
           +    +L+ M  R
Sbjct: 332 NMAKSILNTMSHR 344



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 115/223 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L+ M  RGV      Y+ +I+GFC    +D+A +LF  M       NV+TYN+LI+
Sbjct: 334 AKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK+  +  +L L   M  +G +P ++TY+++   L + H V+ A+ L  +++   +  
Sbjct: 394 GLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP 453

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   IDGLCK G + +A  +F  L V    L +  Y+ +I G C  G  + A  L 
Sbjct: 454 NMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLL 513

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
             +     +P+ +TY I+I    +  + DKA  L  +M  +G+
Sbjct: 514 SKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 130/244 (53%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+ +  +YST+ID  C    ++ A +L+  M       N+VTY+ LI+G+C    +++++
Sbjct: 206 VQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAI 265

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L+++M S+ I P V T+N L     +  +V+ A      M    +  +  TYN+ +DG 
Sbjct: 266 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGY 325

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C    +  A  +  T+        + +Y+ +I+G CKI  ++ A +LF+ +    + PNV
Sbjct: 326 CLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNV 385

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           +TYN +I G C  G++  A +L   M  +G  P+ +T+++++    +N+   K + LL +
Sbjct: 386 ITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIK 445

Query: 256 MDER 259
           + ++
Sbjct: 446 LKDQ 449



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 99/203 (48%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +  ++    K+K     L+L+ +M  +GI+P  V +N L +   ++  +  A  +  ++ 
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                 +T T NTFI G C  G I +A      L  L   L   +Y  LI+GLCK+G+  
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A EL + +    +  +VV Y+ +I   C D  ++ A DL+ +M ++ ++ N VT++ L+
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G     +    + L ++M   N
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSEN 275



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 74/156 (47%)

Query: 104 HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           + V  A+ LF+ +   +       +   +  L K+ +      LF+ +     +     +
Sbjct: 49  NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNF 108

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + LI+  C++G +  A+ +   + ++G  P+ +T N  I GFC  GQ+ +A +    + A
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            G   + V++ TL+ G  +  ET   +ELL R+D +
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGK 204



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 4/208 (1%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           +H+  T  T  N      DV ++++L++ +L +   P  + +  +   L +       L 
Sbjct: 36  IHSFSTSTTFHNN----NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLS 91

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           LF +M++  +      +N  I+  C+ G I  A  +   +  +  E      +  I G C
Sbjct: 92  LFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC 151

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             G++  A      L  +G   + V+Y  +I+G C  G+   A +L   ++ K V  + V
Sbjct: 152 LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVV 211

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
            ++T++    ++   +   +L   M  R
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSR 239



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 101/234 (43%), Gaps = 25/234 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + ++ +G       Y+ +I GFC  G  D A  L   M  N C+ + +TY  
Sbjct: 471 LEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I       + +++  L  EM+++G+  + + Y +    L  +    H L   D +Q + 
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSW--SLSFMAAPAHFLN-NDSLQCTS 587

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                +     ++ +  +  + ++      +R    +  +E  S +I   C        W
Sbjct: 588 SQESGNWAKLLLERIYCDCVLTKS-----NMR----DKDVECPSVIIYSTCD-------W 631

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
                  + G + +V TY +MI GFC+ G  D++  L   ME  G  P+ VT++
Sbjct: 632 S------KQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 146/259 (56%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+RL + M+  G+ P+ + Y++L++ FC   ++  A ELF +M   G   +VVTY+T
Sbjct: 59  VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST 118

Query: 61  LINGYCKTKDVEESLN-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +I+G CKT  V E+L  L+ +M+ +G     V YN L +GL +   +E A KL +EM   
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 178

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TYNT + GLC+ G + EA + F ++        + AY+ L+D L K GK + A
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LF+ +   G MP+ VTYN ++ G      MD+A ++F  M A G APN  T++ ++ G
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298

Query: 240 CIRNNETSKVVELLHRMDE 258
             R  +     ++L  M +
Sbjct: 299 HCRAKKVDDAHKVLEEMSK 317



 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 141/252 (55%), Gaps = 1/252 (0%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +L + M+  G+ P+   Y+ LIDG+   G +D A  L+  M   G   ++ TYN+L+N +
Sbjct: 29  KLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAF 88

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK-LFDEMQHSDVAAE 124
           CK   ++E++ L+  M  KG  P VVTY+T+  GL +  +V  AL+ LF +M     +A 
Sbjct: 89  CKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSAN 148

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           T  YN  I+GLCK+  I  A +L   +           Y+ ++ GLC++GK+  A + F 
Sbjct: 149 TVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFD 208

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           S+P  G  P+VV YN ++     +G+ D+A  LF D+ AKG  P+ VT+N+++LG  R +
Sbjct: 209 SMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 268

Query: 245 ETSKVVELLHRM 256
              +  E+  +M
Sbjct: 269 NMDEAEEMFKKM 280



 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 139/254 (54%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L   MI+RG   N   Y+ LI+G C    I+RA +L   M   G + + +TYNT+++G C
Sbjct: 136 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLC 195

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   V E+   +  M S+G  P VV YN L   L++  + + A+KLF ++       +T 
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN+ + GL +   + EA E+F+ +    C      YS ++ G C+  K++ A ++ + +
Sbjct: 256 TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            ++G +P+VVTYNI++ G C    +DKAH+LF  M   G AP+ V+++ ++ G  + N+ 
Sbjct: 316 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 375

Query: 247 SKVVELLHRMDERN 260
                L  RM ER 
Sbjct: 376 HDARVLFDRMIERK 389



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +  D M  RG  P+   Y+ L+D     G+ D A +LF  +   G M + VTYN+
Sbjct: 200 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNS 259

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  +  +++E+  ++ +M++ G  P   TY+ +  G     +V+ A K+ +EM    
Sbjct: 260 ILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIG 319

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  +DGLCK   + +A ELF T+    C   I +YS +++GLCK  K+  A 
Sbjct: 320 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 379

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +    L+P+VVT+NI++ G C  G++D+A DL   M   G AP+ V +NTLM G 
Sbjct: 380 VLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +   L   M E+
Sbjct: 440 RKQGRHIQADRLTQAMKEK 458



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 133/242 (54%), Gaps = 1/242 (0%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           R   PN + +  ++  FC  G++    +LF  M  NG   + + YN LI+GY K   V+E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +  LY EM+S G+ P++ TYN+L +   +  +++ A++LF  M       +  TY+T I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 134 GLCKNGYIVEAAE-LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           GLCK G + EA E LF  +    C     AY+ LI+GLCK   +E A++L + +   G +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P+ +TYN ++ G C  G++ +A   F  M ++G +P+ V +N L+    +  +T + ++L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 253 LH 254
             
Sbjct: 242 FK 243



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 141/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +LL+ M  +G  P+   Y+T++ G C  G++  A++ F SM   G   +VV YN 
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K    +E++ L+ ++++KG  P  VTYN++  GL     ++ A ++F +M  S 
Sbjct: 225 LLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A   +TY+  + G C+   + +A ++   +  +     +  Y+ L+DGLCK   ++ A 
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 344

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF ++   G  P++V+Y+++++G C   ++  A  LF  M  + + P+ VTFN LM G 
Sbjct: 345 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  +LL +M
Sbjct: 405 CKAGKLDEAKDLLDQM 420



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 123/229 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA +L   +I +G  P+   Y++++ G      +D A E+F  M  +GC  N  TY+ +
Sbjct: 236 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIV 295

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G+C+ K V+++  +  EM   G  P VVTYN L  GL + + V+ A +LF  M  +  
Sbjct: 296 LSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 355

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A +  +Y+  ++GLCK   + +A  LF  +   K    +  ++ L+DGLCK GKL+ A +
Sbjct: 356 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 415

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           L   +   G  P+ V YN +++G    G+  +A  L   M+ KG   +C
Sbjct: 416 LLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 464



 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  +   M+  G  PN   YS ++ G C   ++D A ++   M   G + +VVTYN 
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CKT  V+++  L+S M+  G  P +V+Y+ + +GL + ++V  A  LFD M    
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 389

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  +DGLCK G + EA +L   +    C     AY+ L++GL K G+   A 
Sbjct: 390 LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQAD 449

Query: 181 ELFQSLPRVGLMPN 194
            L Q++   G + +
Sbjct: 450 RLTQAMKEKGFLSD 463



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 59/105 (56%)

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           +C      +  ++   CK GKL   ++LF+ +   G+ P+ + YNI+I G+   G++D+A
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + L+ +M + G+ P+  T+N+L+    +  +  + +EL   M E+
Sbjct: 63  NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK 107


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 149/258 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  + DLM++  V+ +   Y+TLIDG+CL G++D A +L   M ++G   N VTYNT+I
Sbjct: 501 RAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMI 560

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++ +L+ +M SKG+ P +VTY+T+  GLF+  +   A +L+  M  S + 
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIK 620

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GLC+N    +A  +F+ L ++   L    ++ +ID L K G+ + A +L
Sbjct: 621 FDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDL 680

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   GL+PNVVTY +M+      G +++  DLFL +E  G   N    N L+   ++
Sbjct: 681 FASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQ 740

Query: 243 NNETSKVVELLHRMDERN 260
             E  K    L ++DE N
Sbjct: 741 KGEVRKAGVYLSKIDENN 758



 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 137/246 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LLD+M++ G++P+ ++++ LI  +   G++D A  LF  M   G   + VTY  +++  C
Sbjct: 365 LLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALC 424

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               V++++  +  ++S+G+ P  V +  L HGL    + + A +L  EM    +     
Sbjct: 425 MVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNI 484

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            +NT ++ LCK G +  A  +F  +  +  +  +  Y+ LIDG C  GK++ A +L + +
Sbjct: 485 FFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGM 544

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ PN VTYN MI+G+C +G+++ A  LF  M +KGV P  VT++T++ G  +   T
Sbjct: 545 VLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRT 604

Query: 247 SKVVEL 252
           +   EL
Sbjct: 605 AAAKEL 610



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M ++G+ P+   Y  ++D  C+ G++D A   F  +   G   + V +  
Sbjct: 394 VDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRN 453

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C     +++  L  EM+ +GI P  + +NTL + L +   V  A  +FD M   D
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVD 513

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYNT IDG C +G + EAA+L   + +   +     Y+ +I+G CK G++E A+
Sbjct: 514 VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAF 573

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ P +VTY+ ++ G     +   A +L+L M   G+  +  T+N ++LG 
Sbjct: 574 SLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGL 633

Query: 241 IRNNETSKVVELLHRM 256
            +NN T   + +   +
Sbjct: 634 CQNNCTDDALRIFQNL 649



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 35/272 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L D M+ +G+ P+   Y+++I        +D+A  + V M  NG M N +T+N+
Sbjct: 219 LDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNS 278

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC +    +++ ++  M   G+ P V TYNTL   L +  +   A K+FD M    
Sbjct: 279 LLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRG 338

Query: 121 VAAETSTYNTFIDGLC-----------------------------------KNGYIVEAA 145
               ++TY T + G                                     K+G + +A 
Sbjct: 339 HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAM 398

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            LF  +R          Y  ++D LC +GK++ A   F  L   GL P+ V +  +IHG 
Sbjct: 399 LLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           C   + DKA +L ++M  +G+ PN + FNTL+
Sbjct: 459 CARDKWDKAEELAVEMIGRGICPNNIFFNTLL 490



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 130/276 (47%), Gaps = 35/276 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      +I  G+ P+A V+  LI G C   + D+A EL V M   G   N + +NT
Sbjct: 429 VDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNT 488

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK   V  + N++  M+   ++  V+TYNTL  G     +V+ A KL + M    
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG 548

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYNT I+G CKNG I +A  LFR +       GI  YS ++ GL +  +   A 
Sbjct: 549 VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAK 608

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND-------------------------------- 208
           EL+  + + G+  ++ TYNI++ G C +                                
Sbjct: 609 ELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDAL 668

Query: 209 ---GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
              G+ D+A DLF  + A+G+ PN VT+  +M   I
Sbjct: 669 LKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLI 704



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 18/268 (6%)

Query: 3   EASRLLDLMIQR----GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-----NGCMH 53
             S  +D+ ++R    G  PN F Y+ L+ G C      +A  L  +M +      G   
Sbjct: 141 RTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPP 200

Query: 54  NVVTYNTLINGYCKT-KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           +VV+YNT+ING  +  + ++ + +L+ +ML +G+ P VVTYN++   L +   ++ A  +
Sbjct: 201 DVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVV 260

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLID 168
              M  +       T+N+ + G C +G   +A  +F+ +    C  G+E     Y+ L+ 
Sbjct: 261 LVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRM----CRDGVEPDVFTYNTLMG 316

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
            LCK G+   A ++F S+ + G  PN  TY  ++HG+  +G + K H L   M   G+ P
Sbjct: 317 YLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQP 376

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   FN L+    ++ +    + L  +M
Sbjct: 377 DHYIFNILIGTYTKHGKVDDAMLLFSKM 404



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R + ++ +  V PN   YS +ID     G +D A      +  +G     +T++ L+   
Sbjct: 77  RRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKAL 136

Query: 66  CKTKDVEESLNL-YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD---- 120
           C  K   E++++    M   G  P V +Y  L  GL + ++ + AL L   M  +D    
Sbjct: 137 CDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRG 196

Query: 121 -VAAETSTYNTFIDGLCKNGYIVEAA-ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
               +  +YNT I+GL + G  ++ A  LF  +        +  Y+ +I  L K   ++ 
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDK 256

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +   + + G MPN +T+N ++HG+C+ G+ + A  +F  M   GV P+  T+NTLM 
Sbjct: 257 AAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMG 316

Query: 239 GCIRNNETSKVVELLHRMDER 259
              +N  + +  ++   M +R
Sbjct: 317 YLCKNGRSMEARKIFDSMVKR 337


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 146/253 (57%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +++D+M+Q G  P+ F Y+ +++  C  G+++ A+ +   M   GC+ ++ T+NTLI 
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    +EE+L+L  ++  KG+ P V T+N L + L ++     AL+LF+EM++S    
Sbjct: 273 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT ID LC  G + +A +L + +    C      Y+ +IDGLCK  ++E A E+F
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 392

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  N +T+N +I G C D ++D A +L   M ++G+ PN +T+N+++    + 
Sbjct: 393 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 452

Query: 244 NETSKVVELLHRM 256
            +  K  ++L  M
Sbjct: 453 GDIKKAADILETM 465



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L+ M+ RG  P+   ++TLI   C    ++ A +L   + + G   +V T+N 
Sbjct: 245 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 304

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK  D   +L L+ EM + G  P  VTYNTL   L  + ++  AL L  +M+ + 
Sbjct: 305 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYNT IDGLCK   I EA E+F  + +         ++ LIDGLCK  K++ A+
Sbjct: 365 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 424

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL PN +TYN ++  +C  G + KA D+   M A G   + VT+ TL+ G 
Sbjct: 425 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 484

Query: 241 IRNNETSKVVELLHRM 256
            +   T   +++L  M
Sbjct: 485 CKAGRTQVALKVLRGM 500



 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 132/254 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L+ M  RGV P+   ++TL+ GF   G I+ A  +   M   GC    VT N LIN
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK   VE++L    + ++ G  P  +TYNT  +GL +   V HALK+ D M       
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ++ LCKNG + EA  +   +    C   I  ++ LI  LC   +LE A +L 
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ P+V T+NI+I+  C  G    A  LF +M+  G  P+ VT+NTL+      
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 347

Query: 244 NETSKVVELLHRMD 257
            +  K ++LL  M+
Sbjct: 348 GKLGKALDLLKDME 361



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 125/239 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RL + M   G  P+   Y+TLID  C  G++ +A +L   M+  GC  + +TYNT+I+
Sbjct: 318 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 377

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   +EE+  ++ +M  +GI    +T+NTL  GL +  +++ A +L ++M    +  
Sbjct: 378 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQP 437

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ +   CK G I +AA++  T+     E+ +  Y  LI+GLCK G+ + A ++ 
Sbjct: 438 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 497

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           + +   G+ P    YN ++        +  A  LF +M   G  P+ +T+  +  G  R
Sbjct: 498 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 556



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 1/242 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  M   G   +   Y+T+IDG C    I+ A E+F  MD+ G   N +T+NT
Sbjct: 350 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 409

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK K ++++  L ++M+S+G++P  +TYN++     +   ++ A  + + M  + 
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK G    A ++ R +R+       +AY+ ++  L +   +  A 
Sbjct: 470 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 529

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +  VG  P+ +TY I+  G C   G + +A D  L+M  KG  P   +F  L  G
Sbjct: 530 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 589

Query: 240 CI 241
            +
Sbjct: 590 LL 591



 Score =  140 bits (354), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 131/245 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I  G  P+   Y+T ++G C    +  A ++   M   G   +V TYN ++N  CK   +
Sbjct: 186 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 245

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           EE+  + ++M+ +G  P + T+NTL   L   +++E AL L  ++    V+ +  T+N  
Sbjct: 246 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 305

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+ LCK G    A  LF  ++   C      Y+ LID LC +GKL  A +L + +   G 
Sbjct: 306 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 365

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             + +TYN +I G C   ++++A ++F  M+ +G++ N +TFNTL+ G  ++ +     E
Sbjct: 366 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 425

Query: 252 LLHRM 256
           L+++M
Sbjct: 426 LINQM 430



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 130/257 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A R+   M++ G        + LI+G+C  G ++ A         +G   + +TYNT
Sbjct: 140 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 199

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +NG C+   V  +L +   M+ +G  P V TYN + + L +  Q+E A  + ++M    
Sbjct: 200 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +T+NT I  LC    + EA +L R + V      +  ++ LI+ LCK+G    A 
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G  P+ VTYN +I   C+ G++ KA DL  DME+ G   + +T+NT++ G 
Sbjct: 320 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 379

Query: 241 IRNNETSKVVELLHRMD 257
            +     +  E+  +MD
Sbjct: 380 CKKMRIEEAEEVFDQMD 396



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 118/227 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RG++P+   ++TL+   C   ++  A  +   M   G   +  T+ TL+ G+ +   
Sbjct: 80  MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 139

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E +L + + ML  G   T VT N L +G  ++ +VE AL    +        +  TYNT
Sbjct: 140 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 199

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F++GLC+N ++  A ++   +     +  +  Y+ +++ LCK G+LE A  +   +   G
Sbjct: 200 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +P++ T+N +I   C   ++++A DL   +  KGV+P+  TFN L+
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 306



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 118/242 (48%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++ +  VY+ L++      ++     ++  M   G   +VVT+NTL+   C+   V  +
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + +  EM S+G+ P   T+ TL  G  E   +E AL++   M     +A   T N  I+G
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK G + +A    +       E     Y+  ++GLC+   +  A ++   + + G  P+
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYNI+++  C +GQ+++A  +   M  +G  P+  TFNTL+      N   + ++L  
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288

Query: 255 RM 256
           ++
Sbjct: 289 QV 290



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   + V YN L+N   +   ++   ++YSEM ++GI+P VVT+NTL   L   HQV  A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + + +EM    VA + +T+ T + G  + G I  A  +   +  + C       + LI+G
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            CK+G++E A    Q     G  P+ +TYN  ++G C +  +  A  +   M  +G  P+
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             T+N ++    +N +  +   +L++M +R
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDR 258



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%)

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L Q  P  G+  + V YN +++      +M     ++ +M A+G+ P+ VTFNTLM    
Sbjct: 41  LNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALC 100

Query: 242 RNNETSKVVELLHRMDER 259
           R ++    V +L  M  R
Sbjct: 101 RAHQVRTAVLMLEEMSSR 118



 Score = 44.7 bits (104), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 9/149 (6%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++L  M  +G+RP    Y+ ++        I  A  LF  M   G   + +TY  +  
Sbjct: 493 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 552

Query: 64  GYCKTK-DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD------EM 116
           G C+    ++E+ +   EM+ KG  P   ++  L  GL  +   ++ ++  +      ++
Sbjct: 553 GLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 612

Query: 117 QHSDVAAETS--TYNTFIDGLCKNGYIVE 143
           + SDV+A         F D L   G  +E
Sbjct: 613 RESDVSAIRGYLKIRKFYDALATFGRFLE 641


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+E  ++L  M   G+RP+ + Y+TLIDG+C  G + +A E+   M  NG     +TYNT
Sbjct: 375 MEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNT 434

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C    ++++L L+  ML +G+ P  ++ +TL  GLF+  + E AL L+ E     
Sbjct: 435 LLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG 494

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    T+NT I+GLCK G + EA EL   ++ L+C      Y  L DG CK+G+L TA 
Sbjct: 495 LAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTAT 554

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +  +G  P+V  +N  I G     Q  K +D+  +M A+G++PN VT+  L+ G 
Sbjct: 555 HLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614

Query: 241 IRNNETSKVVELLHRM 256
            +     +   L   M
Sbjct: 615 CKEGNLHEACNLYFEM 630



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 147/319 (46%), Gaps = 61/319 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---------------ELFVS 45
           M EA  LLD M +    P++  Y TL DG+C  G++  A                E+F S
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574

Query: 46  --------------------MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                               M   G   N+VTY  LI G+CK  ++ E+ NLY EM++ G
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST------------------ 127
           + P V   + L    ++  +V+ A  +  ++ + D+    S                   
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADG 694

Query: 128 --------YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                   +N  I GLCK+G I +A  LF +LR  +       YS LI G    G ++ A
Sbjct: 695 NPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEA 754

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L   +   GL PN++TYN +I+G C  G++ +A +LF  +++KG++PN +T+NTL+  
Sbjct: 755 FSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDE 814

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  +T++  +L  +M E
Sbjct: 815 YCKEGKTTEAFKLKQKMVE 833



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 124/228 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+ S ++D +          +++ +I G C +G I  A+ LF S+     + +  TY++
Sbjct: 681 IDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSS 740

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G   +  ++E+ +L   MLS G+ P ++TYN+L +GL +  ++  A+ LF+++Q   
Sbjct: 741 LIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TYNT ID  CK G   EA +L + +     +  +  YS LI GLC  G +E A 
Sbjct: 801 ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAI 860

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           +L   +    + PN +TY  +IHG+   G M++   L+ +M  +G+ P
Sbjct: 861 KLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 137/285 (48%), Gaps = 26/285 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---ELFVSMD-INGCM---- 52
           + EA  L   M+  G+ PN F+ S L+  F   G++D A    +  V++D I GC     
Sbjct: 620 LHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTI 679

Query: 53  -----------------HNV-VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
                            H+  V +N +I G CK+  + ++ +L+  + +K   P   TY+
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           +L HG      ++ A  L D M  + +     TYN+ I GLCK+G +  A  LF  L+  
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                   Y+ LID  CK GK   A++L Q +   G+ P V+TY+I+I+G C  G M++A
Sbjct: 800 GISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEA 859

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             L   M    V PN +T+ TL+ G I++    ++ +L   M  R
Sbjct: 860 IKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIR 904



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 132/251 (52%), Gaps = 1/251 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A   ++ M   G+  N   Y  ++D +C  G  + AR +  S+   G   NVVTY  L+
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295

Query: 63  NGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            GYCK   +EE+  +  EM   G I    V Y  + +G  +  +++ A ++ +EM+ + +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGI 355

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 YNT I+GLCK G + E  ++ + +  +       +Y+ LIDG C+ G +  A+E
Sbjct: 356 HVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFE 415

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           + + + R GL    +TYN ++ GFC+   +D A  L+  M  +GVAPN ++ +TL+ G  
Sbjct: 416 MCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLF 475

Query: 242 RNNETSKVVEL 252
           +  +T + + L
Sbjct: 476 KAGKTEQALNL 486



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  + D M + G RP+    + L++    +G+   A  ++  M I G + +  T   
Sbjct: 164 LSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAI 223

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +   YC+   V +++    EM   G+   +V Y+ +      +   E A ++ + +Q   
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIGKLETA 179
           ++    TY   + G CK+G + EA  + + ++     +  E AY  +I+G C+ G+++ A
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA 343

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   +   G+  N+  YN MI+G C  G+M++   +  +ME  G+ P+  ++NTL+ G
Sbjct: 344 TRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDG 403

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R     K  E+  RM  RN
Sbjct: 404 YCREGSMRKAFEMC-RMMVRN 423



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 90/172 (52%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           + V+++ L+  +     +  +LN++  M   G RP++ + N L + L +      A  ++
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            +M+ + V  +  T        C++G + +A E    +  +  E+ + AY  ++D  C +
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           G  E A  + +SL R GL PNVVTY +++ G+C DG+M++A  +  +M+  G
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 112/241 (46%), Gaps = 1/241 (0%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +A  +  L+      G++  A  +F  M   GC  ++ + N L+N   ++ D   +  +Y
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M   G+ P   T   +        +V  A++  +EM+   +      Y+  +D  C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG-LMPNVVT 197
           G+  +A  +  +L+       +  Y+ L+ G CK G++E A  + + +   G ++ + V 
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y +MI+G+C  G+MD A  +  +M   G+  N   +NT++ G  +     +V ++L  M+
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 258 E 258
           +
Sbjct: 387 D 387



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 50/87 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M++ G++P    YS LI G C  G ++ A +L   M  N    N +TY TLI
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPT 89
           +GY K+ ++EE   LY EM  +G+ PT
Sbjct: 883 HGYIKSGNMEEISKLYDEMHIRGLLPT 909


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+E  ++L  M   G+RP+ + Y+TLIDG+C  G + +A E+   M  NG     +TYNT
Sbjct: 375 MEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNT 434

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C    ++++L L+  ML +G+ P  ++ +TL  GLF+  + E AL L+ E     
Sbjct: 435 LLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG 494

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    T+NT I+GLCK G + EA EL   ++ L+C      Y  L DG CK+G+L TA 
Sbjct: 495 LAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTAT 554

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +  +G  P+V  +N  I G     Q  K +D+  +M A+G++PN VT+  L+ G 
Sbjct: 555 HLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614

Query: 241 IRNNETSKVVELLHRM 256
            +     +   L   M
Sbjct: 615 CKEGNLHEACNLYFEM 630



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 147/319 (46%), Gaps = 61/319 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---------------ELFVS 45
           M EA  LLD M +    P++  Y TL DG+C  G++  A                E+F S
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574

Query: 46  --------------------MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                               M   G   N+VTY  LI G+CK  ++ E+ NLY EM++ G
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST------------------ 127
           + P V   + L    ++  +V+ A  +  ++ + D+    S                   
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADG 694

Query: 128 --------YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                   +N  I GLCK+G I +A  LF +LR  +       YS LI G    G ++ A
Sbjct: 695 NPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEA 754

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L   +   GL PN++TYN +I+G C  G++ +A +LF  +++KG++PN +T+NTL+  
Sbjct: 755 FSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDE 814

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  +T++  +L  +M E
Sbjct: 815 YCKEGKTTEAFKLKQKMVE 833



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 132/251 (52%), Gaps = 1/251 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A   ++ M   G+  N   Y  ++D +C  G  + AR +  S+   G   NVVTY  L+
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295

Query: 63  NGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            GYCK   +EE+  +  EM   G I    V Y  + +G  +  +++ A ++ +EM+ + +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGI 355

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 YNT I+GLCK G + E  ++ + +  +       +Y+ LIDG C+ G +  A+E
Sbjct: 356 HVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFE 415

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           + + + R GL    +TYN ++ GFC+   +D A  L+  M  +GVAPN ++ +TL+ G  
Sbjct: 416 MCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLF 475

Query: 242 RNNETSKVVEL 252
           +  +T + + L
Sbjct: 476 KAGKTEQALNL 486



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 19/228 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+ S ++D +          +++ +I G C +G I  A+ LF S+     + +  TY++
Sbjct: 681 IDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSS 740

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G   +  ++E+ +L   MLS G+ P ++TYN+L +GL +  ++  A+ LF+++Q   
Sbjct: 741 LIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TYNT ID  CK G   EA +L +                    + + G +E A 
Sbjct: 801 ISPNGITYNTLIDEYCKEGKTTEAFKLKQK-------------------MVEEGYMEEAI 841

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           +L   +    + PN +TY  +IHG+   G M++   L+ +M  +G+ P
Sbjct: 842 KLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  + D M + G RP+    + L++    +G+   A  ++  M I G + +  T   
Sbjct: 164 LSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAI 223

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +   YC+   V +++    EM   G+   +V Y+ +      +   E A ++ + +Q   
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIGKLETA 179
           ++    TY   + G CK+G + EA  + + ++     +  E AY  +I+G C+ G+++ A
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA 343

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   +   G+  N+  YN MI+G C  G+M++   +  +ME  G+ P+  ++NTL+ G
Sbjct: 344 TRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDG 403

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R     K  E+  RM  RN
Sbjct: 404 YCREGSMRKAFEMC-RMMVRN 423



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 90/172 (52%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           + V+++ L+  +     +  +LN++  M   G RP++ + N L + L +      A  ++
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            +M+ + V  +  T        C++G + +A E    +  +  E+ + AY  ++D  C +
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           G  E A  + +SL R GL PNVVTY +++ G+C DG+M++A  +  +M+  G
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 112/241 (46%), Gaps = 1/241 (0%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +A  +  L+      G++  A  +F  M   GC  ++ + N L+N   ++ D   +  +Y
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M   G+ P   T   +        +V  A++  +EM+   +      Y+  +D  C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG-LMPNVVT 197
           G+  +A  +  +L+       +  Y+ L+ G CK G++E A  + + +   G ++ + V 
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y +MI+G+C  G+MD A  +  +M   G+  N   +NT++ G  +     +V ++L  M+
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 258 E 258
           +
Sbjct: 387 D 387



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 16/105 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH------- 53
           +  A  L + +  +G+ PN   Y+TLID +C  G+   A +L   M   G M        
Sbjct: 786 LSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLD 845

Query: 54  ---------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPT 89
                    N +TY TLI+GY K+ ++EE   LY EM  +G+ PT
Sbjct: 846 QMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 135/258 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   ++ RG+ P+ F Y+ LI GFC  G+      L   M       NV TYN LI
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   + ++ ++ + M+ +G RP +VT+NTL  G    + V  A KLFD      + 
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGIT 355

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YN  I G CKN  I EA  LF  +   K    I  YS LIDGLCK G++  AWEL
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G  PNV+TYNIM+   C    +DKA +LF  M  +G+ PN  ++N L+ G  +
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCK 475

Query: 243 NNETSKVVELLHRMDERN 260
           +    + + L   M  RN
Sbjct: 476 SKRIDEAMNLFEEMHRRN 493



 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 147/256 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E +RLL  M+ R V  N + Y+ LID  C  G + +A ++   M   G   ++VT+NTL+
Sbjct: 271 EVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLM 330

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC   DV E+  L+      GI P V +YN L  G  + ++++ AL LF++M +  +A
Sbjct: 331 SGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLA 390

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY++ IDGLCK+G I  A ELF  +        +  Y+ ++D LCKI  ++ A EL
Sbjct: 391 PNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIEL 450

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   GL PNV +YNI+I+G+C   ++D+A +LF +M  + + P+ VT+N L+ G  +
Sbjct: 451 FNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCK 510

Query: 243 NNETSKVVELLHRMDE 258
           +   S   EL + M +
Sbjct: 511 SGRISHAWELFNVMHD 526



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 137/236 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + +LMI+RG RP+   ++TL+ G+CL  ++  AR+LF +    G   +V +YN 
Sbjct: 304 LGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNI 363

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK   ++E+L+L+++M  K + P +VTY++L  GL +  ++ +A +LF  +    
Sbjct: 364 LIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGG 423

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYN  +D LCK   + +A ELF  +        + +Y+ LI+G CK  +++ A 
Sbjct: 424 PSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAM 483

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            LF+ + R  L+P+ VTYN +I G C  G++  A +LF  M   G   + +T+N L
Sbjct: 484 NLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNIL 539



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 111/203 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D   + G+ P+ + Y+ LI G+C    ID A  LF  M+      N+VTY++LI
Sbjct: 341 EARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLI 400

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK+  +  +  L+S +   G  P V+TYN +   L +I  V+ A++LF+ M    + 
Sbjct: 401 DGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLT 460

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              S+YN  I+G CK+  I EA  LF  +           Y+CLIDGLCK G++  AWEL
Sbjct: 461 PNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWEL 520

Query: 183 FQSLPRVGLMPNVVTYNIMIHGF 205
           F  +   G   +V+TYNI+   F
Sbjct: 521 FNVMHDGGPPVDVITYNILFDAF 543



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 43/292 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  +L ++++RG + NA   +T++ G C+ GE+ +A E   S+   G + + VTY T
Sbjct: 129 MGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGT 188

Query: 61  LINGYCKT---------------------------------KD--VEESLNLYSEMLSKG 85
           LING CK                                  KD  V E+ +LYS+++ +G
Sbjct: 189 LINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRG 248

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I P V TY  L HG   + Q     +L  +M   +V     TYN  ID LCK G + +A 
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAH 308

Query: 146 ELFRTLRVLKCELG----IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
           +    +R L  E G    +  ++ L+ G C    +  A +LF +    G+ P+V +YNI+
Sbjct: 309 D----MRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNIL 364

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           I G+C + ++D+A  LF  M  K +APN VT+++L+ G  ++   S   EL 
Sbjct: 365 IIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELF 416



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 1/232 (0%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           RG+ P+    S LI+ +C  G +  A  +   +   G   N +T  T++ G C   +V +
Sbjct: 107 RGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRK 166

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L  +  ++++G     VTY TL +GL +I     A +L  +M+   V      YN  +D
Sbjct: 167 ALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVD 226

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLCK+G + EA +L+  +     +  +  Y+CLI G C +G+      L   +    +  
Sbjct: 227 GLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL 286

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN 244
           NV TYNI+I   C  G + KAHD+   M  +G  P+ VTFNTLM G C+ N+
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYND 338



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 101/173 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + M  + + PN   YS+LIDG C +G I  A ELF ++   G   NV+TYN 
Sbjct: 374 IDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNI 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + V++++ L++ M  +G+ P V +YN L +G  +  +++ A+ LF+EM   +
Sbjct: 434 MLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRN 493

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +  ++ TYN  IDGLCK+G I  A ELF  +      + +  Y+ L D   KI
Sbjct: 494 LVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 118/259 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   +I     P+   ++ ++           A  L   M + G   ++VT + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC    +  + ++   +L +G +   +T  T+  GL    +V  AL+  D +    
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK G   EA EL   +        +  Y+ ++DGLCK G +  A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G+ P+V TY  +IHGFC  GQ  +   L  DM  + V  N  T+N L+   
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 241 IRNNETSKVVELLHRMDER 259
            +     K  ++ + M ER
Sbjct: 299 CKKGMLGKAHDMRNLMIER 317



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 109/225 (48%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           ID A  LF  +     + +VV +N ++    K K    +++L  +M  +GI P++VT + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L +    +  +  A  +   +          T  T + GLC NG + +A E   ++    
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
             L    Y  LI+GLCKIG    A+EL   +    + PNVV YN+++ G C DG + +A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           DL+ D+  +G+ P+  T+  L+ G     +  +V  LL  M +RN
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 74/139 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   +   G  PN   Y+ ++D  C    +D+A ELF  M   G   NV +YN LIN
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK+K ++E++NL+ EM  + + P  VTYN L  GL +  ++ HA +LF+ M       
Sbjct: 472 GYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPV 531

Query: 124 ETSTYNTFIDGLCKNGYIV 142
           +  TYN   D   K  +++
Sbjct: 532 DVITYNILFDAFSKIQHVI 550



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L +LM +RG+ PN   Y+ LI+G+C +  ID A  LF  M     + + VTYN 
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           LI+G CK+  +  +  L++ M   G    V+TYN LF    +I  V
Sbjct: 504 LIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 149/259 (57%), Gaps = 15/259 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA   + +M++ GV P+   YS+L+DG+CL  E+++A+ +               Y+ 
Sbjct: 297 IKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------------YSI 341

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK K V+++L+L+ EM  + I P  VTYN+L  GL +  ++ +A +L DEM+ S 
Sbjct: 342 VINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSG 401

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TYN+ ID LCKN ++ +A  L + ++    +L +  Y+ LIDGLCK G+L+ A 
Sbjct: 402 QPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQ 461

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +FQ L   G    V TY IMI+G C +G +++A  L   ME  G  P+ VT  T++   
Sbjct: 462 VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRAL 521

Query: 241 IRNNETSKVVELLHRMDER 259
             N++  +  +LL  M  R
Sbjct: 522 FENDKNERAEKLLREMIAR 540



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 20/279 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA    D ++  G   N   Y TLI+G C  GE   A ++   ++      +VV Y+T
Sbjct: 157 VKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYST 216

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK K V ++  LYSEM++K I PTVVT N+L +G   + Q + A  L  EM   +
Sbjct: 217 IIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--------------------VLKCELGI 160
           +  +  T+N  +D LCK G I EA      +                     V +     
Sbjct: 277 INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAK 336

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             YS +I+G CKI  ++ A  LF  +    + P+ VTYN +I G C  G++  A +L  +
Sbjct: 337 HVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDE 396

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           M   G   + +T+N+L+    +N+   K + L+ ++ ++
Sbjct: 397 MRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQ 435



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 128/234 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++PN    S LI+ +C  G++  A  +F  +   G   N +T  TL+ G+C    V+E+
Sbjct: 101 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 160

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+ +  +L+ G     V+Y TL +GL +I +   AL++  +++   V+ +   Y+T IDG
Sbjct: 161 LHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDG 220

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + +A EL+  +   +    +   + LI G C +G+ + A+ L + +    + P+
Sbjct: 221 LCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPD 280

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           V T+NI++   C +G++ +A      M  +GV P+ VT+++LM G    NE +K
Sbjct: 281 VYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNK 334



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 105/220 (47%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   +  ++              LF  ++ NG   N+V+ + LIN YC    +  + ++
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           ++++L  G  P  +T  TL  G    H+V+ AL   D +          +Y T I+GLCK
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G    A ++ R +        +  YS +IDGLCK   +  A+EL+  +    + P VVT
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            N +I+G+C  GQ  +A  L  +M  K + P+  TFN L+
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILV 288



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 35/226 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M  R + P+   Y++LIDG C +G I  A EL   M  +G   +++TYN+
Sbjct: 352 VDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNS 411

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V++++ L  ++  +GI+  + TYN L                        
Sbjct: 412 LIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNIL------------------------ 447

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                      IDGLCK G + +A  +F+ L +    L +  Y+ +I+GLC  G L  A 
Sbjct: 448 -----------IDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAE 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   +   G +P+ VT   +I     + + ++A  L  +M A+G+
Sbjct: 497 TLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 100/207 (48%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V+ +  +++   K K     ++L+ ++   GI+P +V+ + L +    + Q+  A  +F
Sbjct: 70  SVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIF 129

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            ++        T T  T + G C N  + EA      +  L       +Y  LI+GLCKI
Sbjct: 130 AKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKI 189

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G+   A ++ + +    +  +VV Y+ +I G C D  ++ A++L+ +M  K ++P  VT 
Sbjct: 190 GETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTL 249

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           N+L+ G     +  +   LL  M  +N
Sbjct: 250 NSLIYGYCIVGQFKEAFGLLREMVLKN 276



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/186 (19%), Positives = 81/186 (43%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V++ ++ +  ML     P+V+ +  +   L ++      + LF +++ + +     + + 
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+  C  G +  A  +F  +  +         + L+ G C   K++ A      +  +G
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
              N V+Y  +I+G C  G+   A  +   +E K V+ + V ++T++ G  ++   +   
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 251 ELLHRM 256
           EL   M
Sbjct: 232 ELYSEM 237



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 71/155 (45%)

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
            V+  +  F  M   + A     +   +  L K  +      LF  L     +  I + S
Sbjct: 51  HVDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLS 110

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LI+  C +G++  A+ +F  + ++G  PN +T   ++ GFC + ++ +A      + A 
Sbjct: 111 ILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLAL 170

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G   N V++ TL+ G  +  ET   +++L +++ +
Sbjct: 171 GFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGK 205


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 146/253 (57%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +++D+M+Q G  P+ F Y+ +++  C  G+++ A+ +   M   GC+ ++ T+NTLI 
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    +EE+L+L  ++  KG+ P V T+N L + L ++     AL+LF+EM++S    
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT ID LC  G + +A +L + +    C      Y+ +IDGLCK  ++E A E+F
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  N +T+N +I G C D ++D A +L   M ++G+ PN +T+N+++    + 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 244 NETSKVVELLHRM 256
            +  K  ++L  M
Sbjct: 545 GDIKKAADILETM 557



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L+ M+ RG  P+   ++TLI   C    ++ A +L   + + G   +V T+N 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK  D   +L L+ EM + G  P  VTYNTL   L  + ++  AL L  +M+ + 
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYNT IDGLCK   I EA E+F  + +         ++ LIDGLCK  K++ A+
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL PN +TYN ++  +C  G + KA D+   M A G   + VT+ TL+ G 
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 241 IRNNETSKVVELLHRM 256
            +   T   +++L  M
Sbjct: 577 CKAGRTQVALKVLRGM 592



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 132/254 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L+ M  RGV P+   ++TL+ GF   G I+ A  +   M   GC    VT N LIN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK   VE++L    + ++ G  P  +TYNT  +GL +   V HALK+ D M       
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ++ LCKNG + EA  +   +    C   I  ++ LI  LC   +LE A +L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ P+V T+NI+I+  C  G    A  LF +M+  G  P+ VT+NTL+      
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 244 NETSKVVELLHRMD 257
            +  K ++LL  M+
Sbjct: 440 GKLGKALDLLKDME 453



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 126/245 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RL + M   G  P+   Y+TLID  C  G++ +A +L   M+  GC  + +TYNT+I+
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   +EE+  ++ +M  +GI    +T+NTL  GL +  +++ A +L ++M    +  
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQP 529

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ +   CK G I +AA++  T+     E+ +  Y  LI+GLCK G+ + A ++ 
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ P    YN ++        +  A  LF +M   G  P+ +T+  +  G  R 
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRG 649

Query: 244 NETSK 248
               K
Sbjct: 650 GGPIK 654



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 1/242 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  M   G   +   Y+T+IDG C    I+ A E+F  MD+ G   N +T+NT
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK K ++++  L ++M+S+G++P  +TYN++     +   ++ A  + + M  + 
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK G    A ++ R +R+       +AY+ ++  L +   +  A 
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +  VG  P+ +TY I+  G C   G + +A D  L+M  KG  P   +F  L  G
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681

Query: 240 CI 241
            +
Sbjct: 682 LL 683



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 131/245 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I  G  P+   Y+T ++G C    +  A ++   M   G   +V TYN ++N  CK   +
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           EE+  + ++M+ +G  P + T+NTL   L   +++E AL L  ++    V+ +  T+N  
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+ LCK G    A  LF  ++   C      Y+ LID LC +GKL  A +L + +   G 
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             + +TYN +I G C   ++++A ++F  M+ +G++ N +TFNTL+ G  ++ +     E
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 252 LLHRM 256
           L+++M
Sbjct: 518 LINQM 522



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 130/257 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A R+   M++ G        + LI+G+C  G ++ A         +G   + +TYNT
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +NG C+   V  +L +   M+ +G  P V TYN + + L +  Q+E A  + ++M    
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +T+NT I  LC    + EA +L R + V      +  ++ LI+ LCK+G    A 
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G  P+ VTYN +I   C+ G++ KA DL  DME+ G   + +T+NT++ G 
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 241 IRNNETSKVVELLHRMD 257
            +     +  E+  +MD
Sbjct: 472 CKKMRIEEAEEVFDQMD 488



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 118/227 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RG++P+   ++TL+   C   ++  A  +   M   G   +  T+ TL+ G+ +   
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E +L + + ML  G   T VT N L +G  ++ +VE AL    +        +  TYNT
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F++GLC+N ++  A ++   +     +  +  Y+ +++ LCK G+LE A  +   +   G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +P++ T+N +I   C   ++++A DL   +  KGV+P+  TFN L+
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 118/242 (48%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++ +  VY+ L++      ++     ++  M   G   +VVT+NTL+   C+   V  +
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + +  EM S+G+ P   T+ TL  G  E   +E AL++   M     +A   T N  I+G
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK G + +A    +       E     Y+  ++GLC+   +  A ++   + + G  P+
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYNI+++  C +GQ+++A  +   M  +G  P+  TFNTL+      N   + ++L  
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 255 RM 256
           ++
Sbjct: 381 QV 382



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   + V YN L+N   +   ++   ++YSEM ++GI+P VVT+NTL   L   HQV  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + + +EM    VA + +T+ T + G  + G I  A  +   +  + C       + LI+G
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            CK+G++E A    Q     G  P+ +TYN  ++G C +  +  A  +   M  +G  P+
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             T+N ++    +N +  +   +L++M +R
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%)

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L Q  P  G+  + V YN +++      +M     ++ +M A+G+ P+ VTFNTLM    
Sbjct: 133 LNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALC 192

Query: 242 RNNETSKVVELLHRMDER 259
           R ++    V +L  M  R
Sbjct: 193 RAHQVRTAVLMLEEMSSR 210



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 9/149 (6%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++L  M  +G+RP    Y+ ++        I  A  LF  M   G   + +TY  +  
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644

Query: 64  GYCKTK-DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD------EM 116
           G C+    ++E+ +   EM+ KG  P   ++  L  GL  +   ++ ++  +      ++
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 704

Query: 117 QHSDVAAETS--TYNTFIDGLCKNGYIVE 143
           + SDV+A         F D L   G  +E
Sbjct: 705 RESDVSAIRGYLKIRKFYDALATFGRFLE 733


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/253 (36%), Positives = 138/253 (54%), Gaps = 5/253 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+R + P    ++ +I+G C  G++++A ++   M + G   NV+TYNTLI+GYCK   
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGK 213

Query: 71  VEESLN---LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           + +      +  EM + GI P  VT+N L  G  +   V  A+K+F EM    V     T
Sbjct: 214 IGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVT 273

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKC-ELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           YN+ I+GLC NG + EA  L R   V  C +  I  ++ L++G CK   ++ A ELF  +
Sbjct: 274 YNSLINGLCNNGKVNEATAL-RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM 332

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
           P+ G+ PNV TYNI+I  +C D  M+ A  L+  M  KGV P+  T+N L+ G  R  + 
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392

Query: 247 SKVVELLHRMDER 259
                L+  MD +
Sbjct: 393 EAARNLVSEMDTK 405



 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 145/259 (55%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR---ARELFVSMDINGCMHNVVT 57
           +++A  +++ M  RGV  N   Y+TLIDG+C  G+I +   A  +   M  +G   N VT
Sbjct: 179 LNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVT 238

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N LI+G+CK K+V  ++ +++EM  +G++P VVTYN+L +GL    +V  A  L D+M 
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMV 298

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           +S +     T+N  ++G CKN  + +A ELF  +        +  Y+ LID  CK   +E
Sbjct: 299 NSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENME 358

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A+ L++ +   G+ P+V TYN +I G C  G ++ A +L  +M+ K +  + +T+N L+
Sbjct: 359 DAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILI 418

Query: 238 LGCIRNNETSKVVELLHRM 256
                  E  K + LL  M
Sbjct: 419 DSLCNKGEMKKALRLLDEM 437



 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 133/239 (55%), Gaps = 12/239 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ L D M+   ++PN   ++ L++GFC    + +A ELF  M   G   NV TYN 
Sbjct: 287 VNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNI 346

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ YCK +++E++  LY  ML KG+ P V TYN L  GL     +E A  L  EM    
Sbjct: 347 LIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK--CELGIEA----YSCLIDGLCKIG 174
           + A+  TYN  ID LC  G      E+ + LR+L   C  G++     Y+ +IDG CK G
Sbjct: 407 LKADLITYNILIDSLCNKG------EMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            L  A  L   + +VG + NV TYN++I GFC   +++ A+ L  +M  KG+ PN +T+
Sbjct: 461 NLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519



 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 139/257 (54%), Gaps = 2/257 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTLI 62
           A ++   M ++GV+PN   Y++LI+G C  G+++ A  L   M +N C+  N++T+N L+
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM-VNSCLKPNIITHNALL 313

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K V+++  L+ +M  +GI P V TYN L     +   +E A  L+  M    V 
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + STYN  I GLC+ G +  A  L   +     +  +  Y+ LID LC  G+++ A  L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R GL P+ +TYN MI G+C +G +  A +L   ME  G   N  T+N L+ G  +
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 243 NNETSKVVELLHRMDER 259
            ++      LL+ M E+
Sbjct: 494 KDKLEDANGLLNEMLEK 510



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 108/211 (51%), Gaps = 5/211 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M ++G+ PN   Y+ LID +C    ++ A  L+  M   G   +V TYN LI
Sbjct: 324 QAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLI 383

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+  D+E + NL SEM +K ++  ++TYN L   L    +++ AL+L DEM    + 
Sbjct: 384 AGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLK 443

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDG CK G +  A  L   +  +     +  Y+ LI G CK  KLE A  L
Sbjct: 444 PSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGL 503

Query: 183 FQSLPRVGLMPNVVTYNI-----MIHGFCND 208
              +   GL+PN +TY I     M  GF  D
Sbjct: 504 LNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 122/223 (54%), Gaps = 5/223 (2%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           E F      G   +V + N L++G  K  ++ +   +Y EM+ + I PT++++N + +GL
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
            ++ ++  A  + ++M+   V+A   TYNT IDG CK G I +  +    L+ ++ + GI
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRAD-GI 232

Query: 161 ----EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
                 ++ LIDG CK   +  A ++F  + R G+ PNVVTYN +I+G CN+G++++A  
Sbjct: 233 CPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATA 292

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L   M    + PN +T N L+ G  +N    +  EL   M ++
Sbjct: 293 LRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQ 335



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 3/219 (1%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           ++ +S+  +    N +  + L+  Y K          +      G++ +V + N L  GL
Sbjct: 79  QILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGL 138

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
            ++ ++     ++ EM    +     ++N  I+GLCK G + +A ++   ++V      +
Sbjct: 139 VKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANV 198

Query: 161 EAYSCLIDGLC---KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             Y+ LIDG C   KIGK+  A  + + +   G+ PN VT+NI+I GFC D  +  A  +
Sbjct: 199 ITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV 258

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           F +M  +GV PN VT+N+L+ G   N + ++   L  +M
Sbjct: 259 FAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM 297



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 62/102 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A RLLD M ++G++P+   Y+T+IDG+C  G +  A  L   M+  G + NV TYN 
Sbjct: 427 MKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNV 486

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           LI G+CK   +E++  L +EML KG+ P  +TY  +   + E
Sbjct: 487 LIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMME 528



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 71/141 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L+  M  + ++ +   Y+ LID  C  GE+ +A  L   M   G   + +TYNT
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK  ++  +LNL S+M   G    V TYN L  G  +  ++E A  L +EM    
Sbjct: 452 MIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKG 511

Query: 121 VAAETSTYNTFIDGLCKNGYI 141
           +     TY    + + + G++
Sbjct: 512 LIPNRMTYEIVTEEMMEKGFV 532


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/280 (34%), Positives = 149/280 (53%), Gaps = 36/280 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN----------- 49
           +D+A R+L  MI +G+ P+  VY+TLIDGFC  G I  A +LF  M+             
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 50  ------------------------GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                   G   + VTY TLI+GYCK+ ++E++ +L+++M+  G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + P VVTY  L  GL ++ QV+ A +L  EM    +     TYN+ ++GLCK+G I +A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L   + V         ++ L+D  CK G++  A EL + +   GL P V+T+N++++GF
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN 244
           C  G ++    L   M  KG+ PN  T+N+LM   CIRNN
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNN 340



 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 140/244 (57%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           RG  P+   YST+I+G+CL GE+ +  +L   M + G   N+ TYN++I   CK+  V++
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +  +  EM+++GI P  V Y TL  G  ++  ++ A KLFDEM+   +  +   Y   I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLC+ G ++EA ++F  +     E     Y+ LIDG CK G++E A+ L   + + GL P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NVVTY  +  G C  GQ+D A++L  +M  KG+  N  T+N+L+ G  ++    + V+L+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 254 HRMD 257
             M+
Sbjct: 244 EEME 247



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA ++ + M  RGV P+   Y+TLIDG+C +GE+++A  L   M  +G   NVVTY  
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTA 190

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G CK   V+ +  L  EM  KG++  + TYN+L +GL +   +  A+KL +EM+ + 
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T T+ T +D  CK G +V+A EL R +     +  +  ++ L++G C  G LE   
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGE 310

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+MPN  TYN ++  +C    M    +++  M A+GV P+  T+N L+ G 
Sbjct: 311 RLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGH 370

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +   L   M E+
Sbjct: 371 CKARNMKEAWFLHKEMAEK 389



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 138/254 (54%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +L+  M  +G++PN + Y+++I   C +G++D A  +   M   G + + V Y TLI+G+
Sbjct: 31  KLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGF 90

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK  +++ +  L+ EM  + I P  + Y  +  GL    ++  A K+F++M    V  + 
Sbjct: 91  CKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDE 150

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY T IDG CK+G + +A  L   +        +  Y+ L DGLCK+G+++TA EL   
Sbjct: 151 VTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHE 210

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   GL  N+ TYN +++G C  G + +A  L  +ME  G+ P+ +TF TLM    +  E
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270

Query: 246 TSKVVELLHRMDER 259
             K  ELL  M +R
Sbjct: 271 MVKAHELLREMLDR 284



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 116/211 (54%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           M   G   +VV+Y+T+INGYC   ++++ L L  EM  KG++P + TYN++   L +  +
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           V+ A ++  EM +  +  +T  Y T IDG CK G I  A +LF  +   +      AY+ 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +I GLC+ GK+  A ++F  +   G+ P+ VTY  +I G+C  G+M+KA  L   M   G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + PN VT+  L  G  +  +     ELLH M
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEM 211



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 126/238 (52%), Gaps = 8/238 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LL  M  +G++ N   Y++L++G C +G I +A +L   M++ G   + +T+ T
Sbjct: 201 VDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTT 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ YCKT ++ ++  L  EML +G++PTV+T+N L +G      +E   +L   M    
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKL 176
           +   T+TYN+ +   C    +    E+++ +    C  G+      Y+ LI G CK   +
Sbjct: 321 IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM----CARGVMPDSNTYNILIKGHCKARNM 376

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           + AW L + +   G      +YN +I GF    ++ +A +LF +M  +G+A +   +N
Sbjct: 377 KEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYN 434



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 111/215 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L++ M   G+ P+   ++TL+D +C TGE+ +A EL   M   G    V+T+N L+
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLM 297

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C +  +E+   L + ML KGI P   TYN+L       + +    +++  M    V 
Sbjct: 298 NGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVM 357

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +++TYN  I G CK   + EA  L + +      L   +Y+ +I G  K  K+  A EL
Sbjct: 358 PDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEAREL 417

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           F+ + R G+  +   YN+ +     +G M+ A +L
Sbjct: 418 FEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 89/182 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  LL  M+ RG++P    ++ L++GFC++G ++    L   M   G M N  TYN+
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS 330

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  YC   ++  +  +Y  M ++G+ P   TYN L  G  +   ++ A  L  EM    
Sbjct: 331 LMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                S+YN+ I G  K   I EA ELF  +R        E Y+  +D     G +ETA 
Sbjct: 391 FNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETAL 450

Query: 181 EL 182
           EL
Sbjct: 451 EL 452



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 77/144 (53%)

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M+    A +  +Y+T I+G C  G + +  +L + +++   +  +  Y+ +I  LCK GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A  + + +   G++P+ V Y  +I GFC  G +  A+ LF +ME + + P+ + +  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           ++ G  R  +  +  ++ ++M  R
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSR 144



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 49/105 (46%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RGV P++  Y+ LI G C    +  A  L   M   G      +YN++I G+ K K 
Sbjct: 351 MCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKK 410

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           + E+  L+ EM  +G+      YN      +    +E AL+L DE
Sbjct: 411 ISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 146/253 (57%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +++D+M+Q G  P+ F Y+ +++  C  G+++ A+ +   M   GC+ ++ T+NTLI 
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    +EE+L+L  ++  KG+ P V T+N L + L ++     AL+LF+EM++S    
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT ID LC  G + +A +L + +    C      Y+ +IDGLCK  ++E A E+F
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  N +T+N +I G C D ++D A +L   M ++G+ PN +T+N+++    + 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 244 NETSKVVELLHRM 256
            +  K  ++L  M
Sbjct: 545 GDIKKAADILETM 557



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L+ M+ RG  P+   ++TLI   C    ++ A +L   + + G   +V T+N 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK  D   +L L+ EM + G  P  VTYNTL   L  + ++  AL L  +M+ + 
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYNT IDGLCK   I EA E+F  + +         ++ LIDGLCK  K++ A+
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL PN +TYN ++  +C  G + KA D+   M A G   + VT+ TL+ G 
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 241 IRNNETSKVVELLHRM 256
            +   T   +++L  M
Sbjct: 577 CKAGRTQVALKVLRGM 592



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 131/251 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+ M  RGV P+   ++TL+ GF   G I+ A  +   M   GC    VT N LINGYC
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   VE++L    + ++ G  P  +TYNT  +GL +   V HALK+ D M       +  
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  ++ LCKNG + EA  +   +    C   I  ++ LI  LC   +LE A +L + +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ P+V T+NI+I+  C  G    A  LF +M+  G  P+ VT+NTL+       + 
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 247 SKVVELLHRMD 257
            K ++LL  M+
Sbjct: 443 GKALDLLKDME 453



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 126/245 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RL + M   G  P+   Y+TLID  C  G++ +A +L   M+  GC  + +TYNT+I+
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   +EE+  ++ +M  +GI    +T+NTL  GL +  +++ A +L ++M    +  
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQP 529

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ +   CK G I +AA++  T+     E+ +  Y  LI+GLCK G+ + A ++ 
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ P    YN ++        +  A  LF +M   G  P+ +T+  +  G  R 
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRG 649

Query: 244 NETSK 248
               K
Sbjct: 650 GGPIK 654



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 1/242 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  M   G   +   Y+T+IDG C    I+ A E+F  MD+ G   N +T+NT
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK K ++++  L ++M+S+G++P  +TYN++     +   ++ A  + + M  + 
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK G    A ++ R +R+       +AY+ ++  L +   +  A 
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +  VG  P+ +TY I+  G C   G + +A D  L+M  KG  P   +F  L  G
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681

Query: 240 CI 241
            +
Sbjct: 682 LL 683



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 131/245 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I  G  P+   Y+T ++G C    +  A ++   M   G   +V TYN ++N  CK   +
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           EE+  + ++M+ +G  P + T+NTL   L   +++E AL L  ++    V+ +  T+N  
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+ LCK G    A  LF  ++   C      Y+ LID LC +GKL  A +L + +   G 
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             + +TYN +I G C   ++++A ++F  M+ +G++ N +TFNTL+ G  ++ +     E
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 252 LLHRM 256
           L+++M
Sbjct: 518 LINQM 522



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 130/257 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A R+   M++ G        + LI+G+C  G ++ A         +G   + +TYNT
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +NG C+   V  +L +   M+ +G  P V TYN + + L +  Q+E A  + ++M    
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +T+NT I  LC    + EA +L R + V      +  ++ LI+ LCK+G    A 
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G  P+ VTYN +I   C+ G++ KA DL  DME+ G   + +T+NT++ G 
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 241 IRNNETSKVVELLHRMD 257
            +     +  E+  +MD
Sbjct: 472 CKKMRIEEAEEVFDQMD 488



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 118/227 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RG++P+   ++TL+   C   ++  A  +   M   G   +  T+ TL+ G+ +   
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E +L + + ML  G   T VT N L +G  ++ +VE AL    +        +  TYNT
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F++GLC+N ++  A ++   +     +  +  Y+ +++ LCK G+LE A  +   +   G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +P++ T+N +I   C   ++++A DL   +  KGV+P+  TFN L+
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 118/242 (48%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++ +  VY+ L++      ++     ++  M   G   +VVT+NTL+   C+   V  +
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + +  EM S+G+ P   T+ TL  G  E   +E AL++   M     +A   T N  I+G
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK G + +A    +       E     Y+  ++GLC+   +  A ++   + + G  P+
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYNI+++  C +GQ+++A  +   M  +G  P+  TFNTL+      N   + ++L  
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 255 RM 256
           ++
Sbjct: 381 QV 382



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   + V YN L+N   +   ++   ++YSEM ++GI+P VVT+NTL   L   HQV  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + + +EM    VA + +T+ T + G  + G I  A  +   +  + C       + LI+G
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            CK+G++E A    Q     G  P+ +TYN  ++G C +  +  A  +   M  +G  P+
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             T+N ++    +N +  +   +L++M +R
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%)

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L Q  P  G+  + V YN +++      +M     ++ +M A+G+ P+ VTFNTLM    
Sbjct: 133 LNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALC 192

Query: 242 RNNETSKVVELLHRMDER 259
           R ++    V +L  M  R
Sbjct: 193 RAHQVRTAVIMLEEMSSR 210



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 9/149 (6%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++L  M  +G+RP    Y+ ++        I  A  LF  M   G   + +TY  +  
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644

Query: 64  GYCKTK-DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD------EM 116
           G C+    ++E+ +   EM+ KG  P   ++  L  GL  +   ++ ++  +      ++
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 704

Query: 117 QHSDVAAETS--TYNTFIDGLCKNGYIVE 143
           + SDV+A         F D L   G  +E
Sbjct: 705 RESDVSAIRGYLKIRKFYDALATFGRFLE 733


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   MIQ  V PN   Y+++I+G C+ G +  A++ F  M   GC  NVVTYNT
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK + V+E + L+  M  +G    + TYNTL HG  ++ ++  AL +F  M    
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+   + GLC NG I  A   F  +R  +  +GI AY+ +I GLCK  K+E AW
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           ELF  LP  G+ P+  TY IMI G C +G   +A +L   M+ +G+
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 137/257 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A+R+L  M++R + P+   ++ LID F   G +D A+EL+  M  +    N VTYN++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING C    + ++   +  M SKG  P VVTYNTL  G  +   V+  +KLF  M     
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A+  TYNT I G C+ G +  A ++F  +   +    I  +  L+ GLC  G++E+A  
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  +        +V YNIMIHG C   +++KA +LF  +  +GV P+  T+  ++LG  
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467

Query: 242 RNNETSKVVELLHRMDE 258
           +N    +  EL+ RM E
Sbjct: 468 KNGPRREADELIRRMKE 484



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 136/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+ LM++ G  PN  VY+TLIDG C  GE++ A EL   M+  G   +VVTYNT
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C +    ++  +  +M+ + I P VVT+  L     +   ++ A +L+ EM  S 
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN+ I+GLC +G + +A + F  +    C   +  Y+ LI G CK   ++   
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LFQ +   G   ++ TYN +IHG+C  G++  A D+F  M ++ V P+ +T   L+ G 
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 241 IRNNETSKVVELLHRMDE 258
             N E    +     M E
Sbjct: 397 CVNGEIESALVKFDDMRE 414



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 123/236 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M++ G  P+   + +L+ GFCL   I  A  L + M  +G   NVV YNTLI+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK  ++  +L L +EM  KG+   VVTYNTL  GL    +   A ++  +M    +  
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+   ID   K G + EA EL++ +     +     Y+ +I+GLC  G+L  A + F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   G  PNVVTYN +I GFC    +D+   LF  M  +G   +  T+NTL+ G
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 129/243 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + ++ LI  FC    +  A  +   M   G   ++VT+ +L++G+C    + ++
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
            +L   M+  G  P VV YNTL  GL +  ++  AL+L +EM+   + A+  TYNT + G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC +G   +AA + R +        +  ++ LID   K G L+ A EL++ + +  + PN
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            VTYN +I+G C  G++  A   F  M +KG  PN VT+NTL+ G  +     + ++L  
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340

Query: 255 RMD 257
           RM 
Sbjct: 341 RMS 343



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 103/190 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +  DLM  +G  PN   Y+TLI GFC    +D   +LF  M   G   ++ TYNTLI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   +  +L+++  M+S+ + P ++T+  L HGL    ++E AL  FD+M+ S+  
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  I GLCK   + +A ELF  L V   +     Y+ +I GLCK G    A EL
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478

Query: 183 FQSLPRVGLM 192
            + +   G++
Sbjct: 479 IRRMKEEGII 488



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 104/194 (53%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           M++ G  H++ ++  LI+ +C+   +  +L++  +M+  G  P++VT+ +L HG   +++
Sbjct: 97  MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           +  A  L   M  S        YNT IDGLCKNG +  A EL   +        +  Y+ 
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+ GLC  G+   A  + + + +  + P+VVT+  +I  F   G +D+A +L+ +M    
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 226 VAPNCVTFNTLMLG 239
           V PN VT+N+++ G
Sbjct: 277 VDPNNVTYNSIING 290



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 95/200 (47%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G+  +   E++  L+ EM+     P++V +  L      + + E  +    +M+   
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  ++   I   C+   +  A  +   +  L  E  I  +  L+ G C + ++  A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G  PNVV YN +I G C +G+++ A +L  +ME KG+  + VT+NTL+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 241 IRNNETSKVVELLHRMDERN 260
             +   S    +L  M +R+
Sbjct: 222 CYSGRWSDAARMLRDMMKRS 241


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   +L + M  +   PN   YS LID  C  G +++A ++F+ M   GC  N+ TY +
Sbjct: 140 VDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTS 199

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K+  V+++  L+ EM S+G+  T V YN+L HGL    + + A KLF EM    
Sbjct: 200 MIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG 259

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+ + + GL   G   EA  +F+  R + C L +  Y+ LID LCK  +L+ AW
Sbjct: 260 LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAW 319

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  L   GL+P+V T+N ++ G C  G++  A  L  DM+  G  P+   +NTL+ G 
Sbjct: 320 EIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL 379

Query: 241 IRNNETSKVVELLHRM 256
            ++    +  +LL  M
Sbjct: 380 RKSGRVEEAGQLLLEM 395



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 144/283 (50%), Gaps = 36/283 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RG RPN F Y+++IDG   +G +D+A  LF  M   G +   V YN+LI+G  ++  
Sbjct: 185 MKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGR 244

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLF----------------------------- 101
            + +  L+ EMLSKG++P  VT+ +L +GL                              
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNV 304

Query: 102 ------EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
                 +  +++ A ++F E++   +  +  T+N  +DGLCK+G I +A  L   ++   
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C   +  Y+ LIDGL K G++E A +L   +  +G  P+VVTYN +I   C  G+++ A 
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDAL 424

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            LF ++ AKG A N VT+NT++ G        +  +L + M +
Sbjct: 425 RLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQ 466



 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 136/243 (55%), Gaps = 5/243 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A++L   M+ +G++P+   +++L+ G  + G    AR +F      GC  +V  YN L
Sbjct: 246 DAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVL 305

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK+K ++E+  ++ E+   G+ P V T+N L  GL +  ++  A  L  +M+ +  
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGC 365

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             + + YNT IDGL K+G + EA +L   ++ L  E  +  Y+ LID  CK G++E A  
Sbjct: 366 TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALR 425

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV----APNCVTFNTLM 237
           LF+ +   G   N VTYN +++G C  G++D+A+ LF  M+ + V     P+ VT+ TL+
Sbjct: 426 LFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLL 484

Query: 238 LGC 240
            G 
Sbjct: 485 NGA 487



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 123/224 (54%), Gaps = 2/224 (0%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++P  F+   L  G+   G ++++ E    M+ + C      YN+LI+ + K    +++L
Sbjct: 52  LQPRIFI--ELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKAL 109

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            +Y  M   G+RP   T+N L +   +  +V+   KLF+EMQ+ + +    TY+  ID +
Sbjct: 110 AVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK G + +A ++F  ++   C   I  Y+ +IDGL K G ++ A+ LF+ +   GL+   
Sbjct: 170 CKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR 229

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           V YN +IHG    G+ D A  LF +M +KG+ P+ VTF +L+ G
Sbjct: 230 VVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYG 273



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 89/196 (45%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  GY     +E+S+     M       T   YN+L     +    + AL ++  M  S 
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T T+N  ++   K   +    +LF  ++   C   +  YS LID +CK G +E A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   G  PN+ TY  MI G    G +DKA  LF +M ++G+    V +N+L+ G 
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 241 IRNNETSKVVELLHRM 256
            R+       +L   M
Sbjct: 240 GRSGRADAAAKLFREM 255



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%)

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G    G + ++ E  + +   +C L   AY+ LID   K G  + A  +++ + + GL P
Sbjct: 63  GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +  T+N++++ F    ++D    LF +M+ +  +PN +T++ L+    +     K +++ 
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 254 HRMDERN 260
             M  R 
Sbjct: 183 LDMKSRG 189



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 36/95 (37%)

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L  G    G LE + E  + +           YN +I  F   G   KA  ++  M   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + P+  TFN LM    +      V +L   M  +N
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN 154


>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           barbata]
          Length = 429

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 137/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G   N VT+ T
Sbjct: 191 LNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTT 250

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 251 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 310

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 311 LKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 370

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  DM+  G AP+ VT+N LM G
Sbjct: 371 KMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 125/234 (53%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D+ E   L S ML
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           + G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T IDG CKNG + 
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
            A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL  + +TY  +I
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G C +G +D A +    M  + +  + V +  L+ G  +   +    ++L  M
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 376



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 17/190 (8%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           H + +Y T+I+  C  + + E+ +L   ++S+  + +      +F  + E          
Sbjct: 15  HTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSAXA---VFAAIXETKGT------ 65

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
               Q  D+   +    T+++    +G++ +A E +R  R  K  +  +    +++ L K
Sbjct: 66  ----QRXDIYVFSGLITTYLE----SGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMK 117

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +   +  W     +   G       +NI++H FC DG +  A  +F  +   G+ P+ V+
Sbjct: 118 LKYFKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVS 177

Query: 233 FNTLMLGCIR 242
           +NTLM G IR
Sbjct: 178 YNTLMNGYIR 187


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 146/258 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA    D++I  GV+PN   Y+TLIDG+C  G++D + + F  M   G   +  TYN L+
Sbjct: 501 EAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALL 560

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGY K   VE++L LY EM  K ++   +T N + HGLF+  ++  A +L+ +M      
Sbjct: 561 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQ 620

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT + GLC+N  + EA  +F  LR  + EL +  ++ +I+ L K+G+++ A  L
Sbjct: 621 LRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSL 680

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G +P+V+TY++MI     +G ++++ DLFL ME  G A +    N ++   + 
Sbjct: 681 FSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLE 740

Query: 243 NNETSKVVELLHRMDERN 260
             +  +    L ++DE+N
Sbjct: 741 KGDVRRAGTYLTKIDEKN 758



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 142/253 (56%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LLDLMI+ G+      ++ LI  +   G +D+A   F  M  NG   +VV+Y+T+I+  C
Sbjct: 365 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 424

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   VE+++  +++M+S+G+ P ++++ +L HGL  I + +   +L  EM +  +  +  
Sbjct: 425 KIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 484

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
             NT +D LCK G +VEA + F  +  +  +  + +Y+ LIDG C +GK++ + + F  +
Sbjct: 485 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRM 544

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL P+  TYN +++G+  +G+++ A  L+ +M  K V    +T N ++ G  +    
Sbjct: 545 VSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRI 604

Query: 247 SKVVELLHRMDER 259
               EL  +M +R
Sbjct: 605 VAARELYMKMVDR 617



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 129/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L D MI +G  P+   YS+LIDG C    +++A  +   M   G M N  TYN 
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNI 278

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYC    +EE++ L  +M   G++P VVTY  L     +I +   A  +FD M    
Sbjct: 279 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKG 338

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               ++ Y+  + G    G +++  +L   +          A++ LI    K G ++ A 
Sbjct: 339 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 398

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  + + GL P+VV+Y+ +IH  C  G+++ A   F  M ++G++PN ++F +L+ G 
Sbjct: 399 TAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 458

Query: 241 IRNNETSKVVELLHRMDER 259
               E  KV EL   M  R
Sbjct: 459 CSIGEWKKVEELAFEMINR 477



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 3/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING---CMHNVVTYNTLINGYCK 67
           M + G  P+ F Y+ LI G C+  +   A EL + M  +G   C  NVV+Y+T+I+G+ K
Sbjct: 156 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFK 215

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             +V+++  L+ EM+ +G  P VVTY++L  GL +   +  A  +   M    V   T T
Sbjct: 216 EGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRT 275

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN  I G C  G + EA  L + +     +  +  Y  LI   CKIG+   A  +F S+ 
Sbjct: 276 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMV 335

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           R G  PN   Y+I++HG+   G +    DL   M   G+      FN L+    ++    
Sbjct: 336 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 395

Query: 248 KVVELLHRMDE 258
           K +     M +
Sbjct: 396 KAMTAFTEMRQ 406



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 125/274 (45%), Gaps = 35/274 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  +L  M  +GV PN   Y+ +I G+C  G+++ A  L   M  +G   +VVTY  
Sbjct: 254 MNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYIL 313

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YCK     E+ +++  M+ KG +P    Y+ L HG      +     L D M    
Sbjct: 314 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 373

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  E   +N  I    K+G + +A   F  +R       + +YS +I  LCKIG++E A 
Sbjct: 374 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAV 433

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM------------------- 221
             F  +   GL PN++++  +IHG C+ G+  K  +L  +M                   
Sbjct: 434 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 493

Query: 222 -------EAK---------GVAPNCVTFNTLMLG 239
                  EA+         GV PN V++NTL+ G
Sbjct: 494 CKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDG 527



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 116/241 (48%), Gaps = 7/241 (2%)

Query: 4   ASRLLDLMIQRGVR---PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           A  L + M + GV     N ++   LI  FC  G +D A   F      G     VT N 
Sbjct: 75  AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134

Query: 61  LINGYCKTKDVEESLNL-YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G C  K  ++++++ +  M   G  P V +YN L  GL    + + AL+L   M   
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTAD 194

Query: 120 ---DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
              + +    +Y+T IDG  K G + +A  LF  +        +  YS LIDGLCK   +
Sbjct: 195 GGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAM 254

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  + Q +   G+MPN  TYNIMI G+C+ GQ+++A  L   M   G+ P+ VT+  L
Sbjct: 255 NKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILL 314

Query: 237 M 237
           +
Sbjct: 315 I 315



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 35/214 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDG-----------------------FCL----- 32
           MDE+ +  D M+  G+RP+++ Y+ L++G                       FC      
Sbjct: 534 MDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 593

Query: 33  -------TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                   G I  AREL++ M   G    + TYNT++ G C+   V+E+L ++ ++ SK 
Sbjct: 594 ILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKE 653

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
               V T+N + + L ++ +++ A  LF  M          TY+  I    + G + E+ 
Sbjct: 654 FELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESD 713

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +LF ++    C       + +I  L + G +  A
Sbjct: 714 DLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 49/234 (20%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI-------HQVEHALKLFDEMQHSDV--- 121
           E++LNL+ E+L +    +V  +N++   +          H    A+ LF+ M  S V   
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 122 -----------------------------------AAETSTYNTFIDGLCKNGYIVEAAE 146
                                                +  T N  I GLC      +A +
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 147 L-FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG---LMPNVVTYNIMI 202
           + FR +  L     + +Y+ LI GLC   K + A EL   +   G     PNVV+Y+ +I
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            GF  +G++DKA+ LF +M  +G  P+ VT+++L+ G  +    +K   +L  M
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHM 264



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 64/143 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+ + +  +    + + ++ +I+     G ID A+ LF +M + G + +V+TY+ 
Sbjct: 639 VDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSL 698

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I    +   +EES +L+  M   G        N +   L E   V  A     ++   +
Sbjct: 699 MIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKN 758

Query: 121 VAAETSTYNTFIDGLCKNGYIVE 143
            + E ST    I  + +  Y  E
Sbjct: 759 FSVEASTAALLIPIVSEKKYQKE 781


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 147/262 (56%), Gaps = 13/262 (4%)

Query: 11  MIQRGVRPNAFV-------------YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           ++++G  PN                Y TLI+G C  G+   A +L   +D      NVV 
Sbjct: 121 ILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVM 180

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YNT+I+  CK K V E+ +LYSEM+S+GI P VVTY+ L  G F + +++ A+ LF++M 
Sbjct: 181 YNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMI 240

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             ++  +  T+N  +DG CK+G + E   +F  +     +  +  Y  L+DG C + ++ 
Sbjct: 241 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN 300

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +F ++ + G+ P+  +YNIMI+GFC   ++D+A +LF  M  K + PN VT+ +L+
Sbjct: 301 KANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLI 360

Query: 238 LGCIRNNETSKVVELLHRMDER 259
            G  ++ + S  ++L+  M +R
Sbjct: 361 DGLCKSGKISYALKLVDEMHDR 382



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 127/234 (54%), Gaps = 8/234 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E   +  +M+++G++PN   Y +L+DG+CL  ++++A  +F +M   G   +  +YN 
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK K V+E++NL+ +M  K I P VVTY +L  GL +  ++ +ALKL DEM    
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL--------FRTLRVLKCELGIEAYSCLIDGLCK 172
           V  +  TY++ +D LCKN  + +A  L        F  L V    L + AY+ +I G C 
Sbjct: 384 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCV 443

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            G    A  L   +   G +P+  TY I+I       + D A  L  +M A+G+
Sbjct: 444 KGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 8/266 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   M+  G+ P+   YS LI GF + G++  A +LF  M +     +V T+N 
Sbjct: 194 VNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNI 253

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   ++E   +++ M+ +GI+P VVTY +L  G   + QV  A  +F+ M    
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGG 313

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +T +YN  I+G CK   + EA  LF+ +        +  Y+ LIDGLCK GK+  A 
Sbjct: 314 VNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYAL 373

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA--------HDLFLDMEAKGVAPNCVT 232
           +L   +   G+ P+++TY+ ++   C + Q+DKA          +F D+  KG   +   
Sbjct: 374 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYA 433

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDE 258
           +  ++ G       ++ + LL +M++
Sbjct: 434 YTVMIQGFCVKGLFNEALALLSKMED 459



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 143/256 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  +  + V+PN  +Y+T+ID  C    ++ A +L+  M   G   +VVTY+ LI+
Sbjct: 162 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALIS 221

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+     ++++++L+++M+ + I+P V T+N L  G  +  +++    +F  M    +  
Sbjct: 222 GFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 281

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY + +DG C    + +A  +F T+         ++Y+ +I+G CKI K++ A  LF
Sbjct: 282 NVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLF 341

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    ++PNVVTY  +I G C  G++  A  L  +M  +GV P+ +T+++++    +N
Sbjct: 342 KKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 401

Query: 244 NETSKVVELLHRMDER 259
           ++  K + LL ++ ++
Sbjct: 402 HQVDKAIALLTKLKDQ 417



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 13/262 (4%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           L+ Q+   P  F +  ++           A  L   M++ G   N+VT N LIN + +  
Sbjct: 50  LLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLG 109

Query: 70  DVEESLNLYSEMLSKGIRPTVVT-------------YNTLFHGLFEIHQVEHALKLFDEM 116
               S ++++ +L KG  P V+T             Y TL +GL ++ Q   AL+L   +
Sbjct: 110 QNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRV 169

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               V      YNT ID +CK   + EA +L+  +        +  YS LI G   +GKL
Sbjct: 170 DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKL 229

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A +LF  +    + P+V T+NI++ GFC DG+M +   +F  M  +G+ PN VT+ +L
Sbjct: 230 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 289

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           M G     + +K   + + M +
Sbjct: 290 MDGYCLVKQVNKANSIFNTMAQ 311


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 146/251 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L D MI++G +P+A++++++I  +C  G+++ A  L   M I G   +VV+Y T
Sbjct: 528 IEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGT 587

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK KD++++    +E+++ G++P  V YN L  G      +  A+ + D M+   
Sbjct: 588 IIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIG 647

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + +  +C  G + EA  +F   R    E+G+  Y+ +I GLCKIGK++ A 
Sbjct: 648 IQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAM 707

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +    + PN +TY  +++ +C  G  ++A  LF +M + G+ P+ V++NTL+ G 
Sbjct: 708 NYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGF 767

Query: 241 IRNNETSKVVE 251
            + +   K +E
Sbjct: 768 SQVDSLDKAIE 778



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 39/283 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+++G+  N    + LI G C    +  A E+  +M   G   + +TYN +I G CK   
Sbjct: 468 MLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSK 527

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +EE+L L  +M+ KG +P    +N++ H   ++ ++E AL L  +M+   V  +  +Y T
Sbjct: 528 IEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGT 587

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETAWELFQSLPR 188
            IDG CK   I +A E    L  + C L   A  Y+ LI G  + G +  A  +  ++  
Sbjct: 588 IIDGYCKAKDIQKANEYLNEL--MACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMES 645

Query: 189 VGLMP-----------------------------------NVVTYNIMIHGFCNDGQMDK 213
           +G+ P                                    VV Y IMI G C  G+MD+
Sbjct: 646 IGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDE 705

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           A + F +M ++ + PN +T+ TLM    ++    +  +L   M
Sbjct: 706 AMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEM 748



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 119/237 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++   RL+  M++RG++PN  + +      C       A  +++ M   G   N+ T N 
Sbjct: 423 LESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNA 482

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+ K+++ +  +   M++KG+    +TYN +  G  +  ++E ALKL D+M    
Sbjct: 483 LIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKG 542

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N+ I   C  G + EA  L   +++   +  + +Y  +IDG CK   ++ A 
Sbjct: 543 FKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKAN 602

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E    L   GL PN V YN +I G+  +G +  A  +   ME+ G+ P  VT+ +LM
Sbjct: 603 EYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLM 659



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 128/255 (50%), Gaps = 1/255 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL D M+ + ++  A  Y+ +    C  GE++RA  +   M   G   +   +N+++
Sbjct: 354 EAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVV 413

Query: 63  NGYC-KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            G   +T  +E  + L SEM+ +G++P           L +  + + A+ ++ +M    +
Sbjct: 414 AGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGL 473

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +T N  I GLC+   +  A E+ RT+     EL    Y+ +I G CK  K+E A +
Sbjct: 474 CINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALK 533

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + R G  P+   +N +IH +C+ G+M++A  L   M+ +GV P+ V++ T++ G  
Sbjct: 534 LRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYC 593

Query: 242 RNNETSKVVELLHRM 256
           +  +  K  E L+ +
Sbjct: 594 KAKDIQKANEYLNEL 608



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 9/261 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RL   M +  V P+   +  LI+G   +        L   M+  G   N V  N 
Sbjct: 282 VDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNE 341

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C+     E++ L+ EM+SK ++ T VTYN +   L +  ++E A ++ +EM  + 
Sbjct: 342 LIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401

Query: 121 VAAETSTYNTFIDGLC-KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG----LCKIGK 175
           +   +  +N+ + GL  + G +     L   +     + G++    L+      LC+  +
Sbjct: 402 MTIHSGLFNSVVAGLLQRTGRLESVVRLISEM----VKRGMKPNDALMTACTKQLCQGRR 457

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + A  ++  +   GL  N+ T N +IHG C    M  A ++   M  KG+  + +T+N 
Sbjct: 458 HQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNI 517

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           ++ GC ++++  + ++L   M
Sbjct: 518 MIQGCCKDSKIEEALKLRDDM 538



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 7/233 (3%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNV--VTYNTLINGYCKTKDV 71
           + V PN + Y+++I   C  G++D   ++   +   G   +   V YN L++  CK+  V
Sbjct: 223 KTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRV 282

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E++ L   M    + P++VT+  L +GL    +      L  EM+   +       N  
Sbjct: 283 DEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNEL 342

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           ID  C+ G+  EA  LF  +   + +     Y+ +   LCK G++E A  + + +   G+
Sbjct: 343 IDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGM 402

Query: 192 MPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   +N ++ G     G+++    L  +M  +G+ PN    + LM  C + 
Sbjct: 403 TIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPN----DALMTACTKQ 451



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 7/240 (2%)

Query: 24  STLIDGFCLT----GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYS 79
           S L+   C+T    G +  A + F  +       +V T N L+    +T ++  +  ++ 
Sbjct: 158 SDLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFD 217

Query: 80  EMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV--AAETSTYNTFIDGLC 136
           EM   K + P   +Y ++   L ++ +V+   K+  ++ H+ +  +A    YN  +D LC
Sbjct: 218 EMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALC 277

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K+G + EA  L   +   +    +  +  LI+GL +  +      L + +  +G+ PN V
Sbjct: 278 KSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEV 337

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             N +I   C  G   +A  LF +M +K +    VT+N +     +  E  +   +L  M
Sbjct: 338 ICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEM 397



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 41/207 (19%)

Query: 57  TYNTLINGYCKTKDVEESLNL----YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           + + LIN  C T     SL L    +  + S+   P+V T N L   L     +    K+
Sbjct: 157 SSDLLIN-TCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKV 215

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           FDEM+                 +  NGY                     +Y+ +I  LCK
Sbjct: 216 FDEMRDCKT-------------VTPNGY---------------------SYTSMIKALCK 241

Query: 173 IGKLETAWELFQSLPRVGLMPNV--VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           +GK++  +++   L   GL  +   V YN+++   C  G++D+A  L   ME   VAP+ 
Sbjct: 242 VGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSM 301

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMD 257
           VTF  L+ G  R++   +V  LL  M+
Sbjct: 302 VTFGILINGLKRSDRFGEVGALLREME 328



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 48/83 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA    + M  R + PN   Y+TL+  +C +G  + A +LF  M  +G + + V+YNT
Sbjct: 703 MDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNT 762

Query: 61  LINGYCKTKDVEESLNLYSEMLS 83
           L+ G+ +   +++++   +E+ S
Sbjct: 763 LVTGFSQVDSLDKAIEKAAEISS 785


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 138/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 174 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 233

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM   +
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKE 293

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 294 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 353

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 354 KMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 114 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 173

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 174 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 233

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +    
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKE 293

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 294 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 353

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 354 KMLREM 359



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AH L  +M  K + P+ +T+ TL+
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLI 305

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 306 DGCCKEGDLDSAFEHRKRMIQEN 328



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 50  RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 109

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 229

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 289


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
           thaliana]
          Length = 1184

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 145/256 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +L+++M ++G++PN+++Y ++I   C   ++  A E F  M   G + + V Y T
Sbjct: 740 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 799

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  D+  +   + EM S+ I P V+TY  +  G  +I  +  A KLF EM    
Sbjct: 800 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++ T+   I+G CK G++ +A  +   +    C   +  Y+ LIDGLCK G L++A 
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + ++GL PN+ TYN +++G C  G +++A  L  + EA G+  + VT+ TLM   
Sbjct: 920 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979

Query: 241 IRNNETSKVVELLHRM 256
            ++ E  K  E+L  M
Sbjct: 980 CKSGEMDKAQEILKEM 995



 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 132/239 (55%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + EA      MI++G+ P+  VY+TLIDGFC  G+I  A + F  M       +V+TY  
Sbjct: 775  LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +I+G+C+  D+ E+  L+ EM  KG+ P  VT+  L +G  +   ++ A ++ + M  + 
Sbjct: 835  IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             +    TY T IDGLCK G +  A EL   +  +  +  I  Y+ +++GLCK G +E A 
Sbjct: 895  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L       GL  + VTY  ++  +C  G+MDKA ++  +M  KG+ P  VTFN LM G
Sbjct: 955  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 134/242 (55%), Gaps = 1/242 (0%)

Query: 4    ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
            AS+    M  R + P+   Y+ +I GFC  G++  A +LF  M   G   + VT+  LIN
Sbjct: 813  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872

Query: 64   GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            GYCK   ++++  +++ M+  G  P VVTY TL  GL +   ++ A +L  EM    +  
Sbjct: 873  GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932

Query: 124  ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               TYN+ ++GLCK+G I EA +L               Y+ L+D  CK G+++ A E+ 
Sbjct: 933  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992

Query: 184  QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
            + +   GL P +VT+N++++GFC  G ++    L   M AKG+APN  TFN+L+   CIR
Sbjct: 993  KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 1052

Query: 243  NN 244
            NN
Sbjct: 1053 NN 1054



 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 134/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL LM  +G  P+   YST+++G+C  GE+D+  +L   M   G   N   Y +
Sbjct: 705 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 764

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   C+   + E+   +SEM+ +GI P  V Y TL  G  +   +  A K F EM   D
Sbjct: 765 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I G C+ G +VEA +LF  +     E     ++ LI+G CK G ++ A+
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   + + G  PNVVTY  +I G C +G +D A++L  +M   G+ PN  T+N+++ G 
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944

Query: 241 IRNNETSKVVELL 253
            ++    + V+L+
Sbjct: 945 CKSGNIEEAVKLV 957



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 136/256 (53%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            M EA +L   M  +G+ P++  ++ LI+G+C  G +  A  +   M   GC  NVVTY T
Sbjct: 845  MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 904

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LI+G CK  D++ +  L  EM   G++P + TYN++ +GL +   +E A+KL  E + + 
Sbjct: 905  LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + A+T TY T +D  CK+G + +A E+ + +     +  I  ++ L++G C  G LE   
Sbjct: 965  LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1024

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +L   +   G+ PN  T+N ++  +C    +  A  ++ DM ++GV P+  T+  L+ G 
Sbjct: 1025 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 1084

Query: 241  IRNNETSKVVELLHRM 256
             +     +   L   M
Sbjct: 1085 CKARNMKEAWFLFQEM 1100



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 123/242 (50%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  N   Y+ +I   C  G I  A  L + M++ G   +V++Y+T++NGYC+  ++++ 
Sbjct: 684 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L   M  KG++P    Y ++   L  I ++  A + F EM    +  +T  Y T IDG
Sbjct: 744 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 803

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK G I  A++ F  +        +  Y+ +I G C+IG +  A +LF  +   GL P+
Sbjct: 804 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            VT+  +I+G+C  G M  A  +   M   G +PN VT+ TL+ G  +  +     ELLH
Sbjct: 864 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923

Query: 255 RM 256
            M
Sbjct: 924 EM 925



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 130/238 (54%), Gaps = 8/238 (3%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D A+ LL  M + G++PN F Y+++++G C +G I+ A +L    +  G   + VTY T
Sbjct: 915  LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 974

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L++ YCK+ +++++  +  EML KG++PT+VT+N L +G      +E   KL + M    
Sbjct: 975  LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKL 176
            +A   +T+N+ +   C    +  A  +++ +    C  G+    + Y  L+ G CK   +
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDM----CSRGVGPDGKTYENLVKGHCKARNM 1090

Query: 177  ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            + AW LFQ +   G   +V TY+++I GF    +  +A ++F  M  +G+A +   F+
Sbjct: 1091 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            ++EA +L+      G+  +   Y+TL+D +C +GE+D+A+E+   M   G    +VT+N 
Sbjct: 950  IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L+NG+C    +E+   L + ML+KGI P   T+N+L       + ++ A  ++ +M    
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            V  +  TY   + G CK   + EA  LF+ ++     + +  YS LI G  K  K   A 
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 1129

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
            E+F  + R GL  +                  +  D F D + KG  P+ +
Sbjct: 1130 EVFDQMRREGLAAD-----------------KEIFDFFSDTKYKGKRPDTI 1163



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 1/191 (0%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQVEHALKLFDEMQHSDVAAETSTYN 129
           + E+  ++ +ML+ G+  +V + N     L  + ++   A+ +F E     V    ++YN
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I  +C+ G I EA  L   + +      + +YS +++G C+ G+L+  W+L + + R 
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           GL PN   Y  +I   C   ++ +A + F +M  +G+ P+ V + TL+ G  +  +    
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813

Query: 250 VELLHRMDERN 260
            +  + M  R+
Sbjct: 814 SKFFYEMHSRD 824


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  RL   M++  V P+ F YS LI+G C  G++D A +LF+ M   G + N VT+ T
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C T   +  + +Y +ML KG++P V+TYNTL +GL ++  +  A KL  EM    
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   IDG CK G +  A E+ + +     EL   A++ LI G C+ G++  A 
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + +   G+ P+  TY ++IHGFC  G +     L  +M+  G  P  VT+N L+ G 
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL  M
Sbjct: 516 CKQGQMKNANMLLDAM 531



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   + +RG+RP    ++TLI+G+C +G +D+   L   M  N    +V TY+ 
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSV 300

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++++  L+ EM  +G+ P  VT+ TL +G     + +  ++++ +M    
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYNT I+GLCK G + EA +L   +     +     Y+ LIDG CK G LE+A 
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ + + + G+  + V +  +I GFC +GQ+ +A     +M   G+ P+  T+  ++ G 
Sbjct: 421 EIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGF 480

Query: 241 IRNNETSKVVELLHRM 256
            +  +     +LL  M
Sbjct: 481 CKKGDVKTGFKLLKEM 496



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 38/272 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A++L   M  RG+ PN   ++TLI+G C+TG  D   E++  M   G   +V+TYNT
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  D+ E+  L  EM  +G++P   TY  L  G  +   +E AL++  EM    
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL--------------------------------F 148
           +  +   +   I G C+ G ++EA                                   F
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGF 490

Query: 149 RTLRVLKCE---LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           + L+ ++C+    G+  Y+ L++GLCK G+++ A  L  ++  +G++P+ +TYNI++ G 
Sbjct: 491 KLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGH 550

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           C  G  +    L      KG+  +  ++ +L+
Sbjct: 551 CKHGNREDFDKL---QSEKGLVQDYGSYTSLI 579



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 126/244 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+   ++ L+   C   +I+ A+ LF  +   G    VV++NTLINGYCK+ ++++ 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L   M+   + P V TY+ L +GL +  Q++ A KLF EM    +     T+ T I+G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            C  G      E+++ +     +  +  Y+ LI+GLCK+G L  A +L   + + GL P+
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             TY ++I G C +G ++ A ++  +M  +G+  + V F  L+ G  R  +  +    L 
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 255 RMDE 258
            M E
Sbjct: 460 EMLE 463



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 126/256 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           +S    ++  RG   +  V+S L++ +  +G    A + F  +  +       +   L +
Sbjct: 139 SSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFD 198

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K      +   Y E+L  G  P V  +N L H L + H++  A  LF E+    +  
Sbjct: 199 RLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRP 258

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              ++NT I+G CK+G + +   L R +   +    +  YS LI+GLCK G+L+ A +LF
Sbjct: 259 TVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLF 318

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL+PN VT+  +I+G C  G+ D   +++  M  KGV P+ +T+NTL+ G  + 
Sbjct: 319 LEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKV 378

Query: 244 NETSKVVELLHRMDER 259
            +  +  +L+  M +R
Sbjct: 379 GDLREAKKLVIEMTQR 394


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 145/257 (56%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +D A R++ LM + G  +PN   ++++++G C  G ++ AR++F  M   G   +VV+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL++GYCK   + ESL ++SEM  +G+ P VVT+ +L H   +   +E A+ L  +M+  
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     T+   IDG CK G++ +A      +R    +  +  Y+ LI+G CK+G+++ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL + +    + P+VVTY+ +I G+C  G +D A  L   M  KGV P+ +T+++L+ G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 240 CIRNNETSKVVELLHRM 256
                  +   EL   M
Sbjct: 301 LCEEKRLNDACELFENM 317



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 141/257 (54%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYN 59
           ++EA  ++  M   G  PNA  Y+TL+  FC  GE+D A  +   M   G    N+VT+N
Sbjct: 26  LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFN 85

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +++NG CK   +E +  ++ EM+ +G+ P VV+YNTL  G  ++  +  +L +F EM   
Sbjct: 86  SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 145

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  T+ + I   CK G + +A  L   +R     +    ++ LIDG CK G L+ A
Sbjct: 146 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 205

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
               + + + G+ P+VV YN +I+G+C  G+MD A +L  +MEAK V P+ VT++T++ G
Sbjct: 206 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 265

Query: 240 CIRNNETSKVVELLHRM 256
             +        +L  +M
Sbjct: 266 YCKVGNLDSAFQLNQKM 282



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 138/253 (54%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L+  M +RG+R N   ++ LIDGFC  G +D A      M   G   +VV YN 
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK   ++ +  L  EM +K ++P VVTY+T+  G  ++  ++ A +L  +M    
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY++ I GLC+   + +A ELF  +  L  +     Y+ LIDG CK G +E A 
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + R G++P+VVTY+++I+G     +  +AH L   +  +   P+ + ++ LML C
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-C 405

Query: 241 IRNNETSKVVELL 253
               E   VV LL
Sbjct: 406 CSKAEFKSVVALL 418



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 132/289 (45%), Gaps = 50/289 (17%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   ++ M + G++P+   Y+ LI+G+C  G +D AREL   M+      +VVTY+T
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK  +++ +  L  +ML KG+ P  +TY++L  GL E  ++  A +LF+ M    
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY T IDG CK G + +A  L   +        +  YS LI+GL K  + + A 
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 181 EL---------------------------FQSLPRV-------GLMPNV----------- 195
            L                           F+S+  +       GLM              
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441

Query: 196 -----VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                  Y+I+IHG C  G + KA      M   G +PN  +  +L+ G
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 490



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 15/236 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L   M+++GV P+A  YS+LI G C    ++ A ELF +M   G   +  TY T
Sbjct: 272 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  +VE++L+L+ EM+ KG+ P VVTY+ L +GL +  + + A +L  ++ H D
Sbjct: 332 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 391

Query: 121 VAAETSTYNTF---------------IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
              +   Y+                 + G C  G + EA ++++++     +L    YS 
Sbjct: 392 PVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSI 451

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           LI G C+ G +  A    + + R G  PN  +   ++ G   +G + +A +   D+
Sbjct: 452 LIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 507



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 101/245 (41%), Gaps = 52/245 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + M+Q GV+P+ F Y+TLIDG C  G +++A  L   M   G + +VVTY+ 
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 366

Query: 61  LINGYCKTKDVEESLNL------------------------------------------- 77
           LING  K+   +E+  L                                           
Sbjct: 367 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 426

Query: 78  -------YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
                  Y  ML +  +     Y+ L HG      V  AL    +M  S  +  +++  +
Sbjct: 427 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 486

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            + GL + G +VEA    + L +  C L   EA   LID   K G ++   ++   + R 
Sbjct: 487 LVRGLFEEGMVVEADNAIQDL-LTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARD 545

Query: 190 GLMPN 194
           GL+P+
Sbjct: 546 GLLPS 550


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 145/253 (57%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +++D+M+Q G  P+ F Y+ +++  C  G+++ A+ +   M   GC+ ++ T+NTLI 
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    +EE+L+L  ++  KG+ P V T+N L + L ++     AL+LF+EM++S    
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT ID LC  G + +A +L + +    C      Y+ +IDGLCK  ++E A E+F
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  N +T+N +I G C D ++D A  L   M ++G+ PN +T+N+++    + 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 244 NETSKVVELLHRM 256
            +  K  ++L  M
Sbjct: 545 GDIKKAADILETM 557



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L+ M+ RG  P+   ++TLI   C    ++ A +L   + + G   +V T+N 
Sbjct: 337 LEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK  D   +L L+ EM + G  P  VTYNTL   L  + ++  AL L  +M+ + 
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYNT IDGLCK   I EA E+F  + +         ++ LIDGLCK  K++ A+
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL PN +TYN ++  +C  G + KA D+   M A G   + VT+ TL+ G 
Sbjct: 517 GLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 241 IRNNETSKVVELLHRM 256
            +   T   +++L  M
Sbjct: 577 CKAGRTQVALKVLRGM 592



 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 132/254 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L+ M  RGV P+   ++TL+ GF   G I+ A  +   M   GC    VT N LIN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK   VE++L    + ++ G  P  +TYNT  +GL +   V HALK+ D M       
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ++ LCKNG + EA  +   +    C   I  ++ LI  LC   +LE A +L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ P+V T+NI+I+  C  G    A  LF +M+  G  P+ VT+NTL+      
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 244 NETSKVVELLHRMD 257
            +  K ++LL  M+
Sbjct: 440 GKLGKALDLLKDME 453



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 125/245 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RL + M   G  P+   Y+TLID  C  G++ +A +L   M+  GC  + +TYNT+I+
Sbjct: 410 ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIID 469

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   +EE+  ++ +M  +GI    +T+NTL  GL +  +++ A  L ++M    +  
Sbjct: 470 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQP 529

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ +   CK G I +AA++  T+     E+ +  Y  LI+GLCK G+ + A ++ 
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ P    YN ++        +  A  LF +M   G  P+ +T+  +  G  R 
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRG 649

Query: 244 NETSK 248
               K
Sbjct: 650 GGPIK 654



 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 1/242 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  M   G   +   Y+T+IDG C    I+ A E+F  MD+ G   N +T+NT
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK K ++++  L ++M+S+G++P  +TYN++     +   ++ A  + + M  + 
Sbjct: 502 LIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I+GLCK G    A ++ R +R+       +AY+ ++  L +   +  A 
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +  VG  P+ +TY I+  G C   G + +A D  L+M  KG  P   +F  L  G
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681

Query: 240 CI 241
            +
Sbjct: 682 LL 683



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 130/245 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I  G  P+   Y+T ++G C    +  A ++   M   G   +V TYN ++N  CK   +
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           EE+  + ++M+ +G  P + T+NTL   L   +++E AL L  ++    V+ +  T+N  
Sbjct: 338 EEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+ LCK G    A  LF  ++   C      Y+ LID LC +GKL  A +L + +   G 
Sbjct: 398 INALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGC 457

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             + +TYN +I G C   ++++A ++F  M+ +G++ N +TFNTL+ G  ++ +      
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517

Query: 252 LLHRM 256
           L+++M
Sbjct: 518 LINQM 522



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 130/257 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A R+   M++ G        + LI+G+C  G ++ A         +G   + +TYNT
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +NG C+   V  +L +   M+ +G  P V TYN + + L +  Q+E A  + ++M    
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +T+NT I  LC    + EA +L R + V      +  ++ LI+ LCK+G    A 
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G  P+ VTYN +I   C+ G++ KA DL  DME+ G   + +T+NT++ G 
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 241 IRNNETSKVVELLHRMD 257
            +     +  E+  +MD
Sbjct: 472 CKKMRIEEAEEVFDQMD 488



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 118/227 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RG++P+   ++TL+   C   ++  A  +   M   G   +  T+ TL+ G+ +   
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E +L + + ML  G   T VT N L +G  ++ +VE AL    +        +  TYNT
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F++GLC+N ++  A ++   +     +  +  Y+ +++ LCK G+LE A  +   +   G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +P++ T+N +I   C   ++++A DL   +  KGV+P+  TFN L+
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 118/242 (48%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++ +  VY+ L++      ++     ++  M   G   +VVT+NTL+   C+   V  +
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + +  EM S+G+ P   T+ TL  G  E   +E AL++   M     +A   T N  I+G
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK G + +A    +       E     Y+  ++GLC+   +  A ++   + + G  P+
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V TYNI+++  C +GQ+++A  +   M  +G  P+  TFNTL+      N   + ++L  
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 255 RM 256
           ++
Sbjct: 381 QV 382



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   + V YN L+N   +   ++   ++YSEM ++GI+P VVT+NTL   L   HQV  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + + +EM    VA + +T+ T + G  + G I  A  +   +  + C       + LI+G
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            CK+G++E A    Q     G  P+ +TYN  ++G C +  +  A  +   M  +G  P+
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             T+N ++    +N +  +   +L++M +R
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 39/78 (50%)

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L Q  P  G+  + V YN +++      +M     ++ +M A+G+ P+ VTFNTLM    
Sbjct: 133 LNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALC 192

Query: 242 RNNETSKVVELLHRMDER 259
           R ++    V +L  M  R
Sbjct: 193 RAHQVRTAVLMLEEMSSR 210



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 9/149 (6%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++L  M  +G+RP    Y+ ++        I  A  LF  M   G   + +TY  +  
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644

Query: 64  GYCKTK-DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD------EM 116
           G C+    ++E+ +   EM+ KG  P   ++  L  GL  +   ++ ++  +      ++
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 704

Query: 117 QHSDVAAETS--TYNTFIDGLCKNGYIVE 143
           + SDV+A         F D L   G  +E
Sbjct: 705 RESDVSAIRGYLKIRKFYDALATFGRFLE 733


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 145/256 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +L+++M ++G++PN+++Y ++I   C   ++  A E F  M   G + + V Y T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  D+  +   + EM S+ I P V+TY  +  G  +I  +  A KLF EM    
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++ T+   I+G CK G++ +A  +   +    C   +  Y+ LIDGLCK G L++A 
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + ++GL PN+ TYN +++G C  G +++A  L  + EA G+  + VT+ TLM   
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 241 IRNNETSKVVELLHRM 256
            ++ E  K  E+L  M
Sbjct: 537 CKSGEMDKAQEILKEM 552



 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 132/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA      MI++G+ P+  VY+TLIDGFC  G+I  A + F  M       +V+TY  
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C+  D+ E+  L+ EM  KG+ P  VT+  L +G  +   ++ A ++ + M  + 
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY T IDGLCK G +  A EL   +  +  +  I  Y+ +++GLCK G +E A 
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L       GL  + VTY  ++  +C  G+MDKA ++  +M  KG+ P  VTFN LM G
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570



 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 134/242 (55%), Gaps = 1/242 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS+    M  R + P+   Y+ +I GFC  G++  A +LF  M   G   + VT+  LIN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK   ++++  +++ M+  G  P VVTY TL  GL +   ++ A +L  EM    +  
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ ++GLCK+G I EA +L               Y+ L+D  CK G+++ A E+ 
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           + +   GL P +VT+N++++GFC  G ++    L   M AKG+APN  TFN+L+   CIR
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609

Query: 243 NN 244
           NN
Sbjct: 610 NN 611



 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 134/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL LM  +G  P+   YST+++G+C  GE+D+  +L   M   G   N   Y +
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   C+   + E+   +SEM+ +GI P  V Y TL  G  +   +  A K F EM   D
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I G C+ G +VEA +LF  +     E     ++ LI+G CK G ++ A+
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   + + G  PNVVTY  +I G C +G +D A++L  +M   G+ PN  T+N+++ G 
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501

Query: 241 IRNNETSKVVELL 253
            ++    + V+L+
Sbjct: 502 CKSGNIEEAVKLV 514



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA +L   M  +G+ P++  ++ LI+G+C  G +  A  +   M   GC  NVVTY T
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  D++ +  L  EM   G++P + TYN++ +GL +   +E A+KL  E + + 
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+T TY T +D  CK+G + +A E+ + +     +  I  ++ L++G C  G LE   
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ PN  T+N ++  +C    +  A  ++ DM ++GV P+  T+  L+ G 
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641

Query: 241 IRNNETSKVVELLHRM 256
            +     +   L   M
Sbjct: 642 CKARNMKEAWFLFQEM 657



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 123/242 (50%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  N   Y+ +I   C  G I  A  L + M++ G   +V++Y+T++NGYC+  ++++ 
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L   M  KG++P    Y ++   L  I ++  A + F EM    +  +T  Y T IDG
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK G I  A++ F  +        +  Y+ +I G C+IG +  A +LF  +   GL P+
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            VT+  +I+G+C  G M  A  +   M   G +PN VT+ TL+ G  +  +     ELLH
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480

Query: 255 RM 256
            M
Sbjct: 481 EM 482



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 130/238 (54%), Gaps = 8/238 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LL  M + G++PN F Y+++++G C +G I+ A +L    +  G   + VTY T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ YCK+ +++++  +  EML KG++PT+VT+N L +G      +E   KL + M    
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKL 176
           +A   +T+N+ +   C    +  A  +++ +    C  G+    + Y  L+ G CK   +
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDM----CSRGVGPDGKTYENLVKGHCKARNM 647

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           + AW LFQ +   G   +V TY+++I GF    +  +A ++F  M  +G+A +   F+
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L+      G+  +   Y+TL+D +C +GE+D+A+E+   M   G    +VT+N 
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C    +E+   L + ML+KGI P   T+N+L       + ++ A  ++ +M    
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   + G CK   + EA  LF+ ++     + +  YS LI G  K  K   A 
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           E+F  + R GL  +                  +  D F D + KG  P+ +
Sbjct: 687 EVFDQMRREGLAAD-----------------KEIFDFFSDTKYKGKRPDTI 720



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 1/191 (0%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQVEHALKLFDEMQHSDVAAETSTYN 129
           + E+  ++ +ML+ G+  +V + N     L  + ++   A+ +F E     V    ++YN
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I  +C+ G I EA  L   + +      + +YS +++G C+ G+L+  W+L + + R 
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           GL PN   Y  +I   C   ++ +A + F +M  +G+ P+ V + TL+ G  +  +    
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370

Query: 250 VELLHRMDERN 260
            +  + M  R+
Sbjct: 371 SKFFYEMHSRD 381


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 137/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   +ID A ELF  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK+G +  A E  + +      L    Y+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 133/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +   + T+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C DG +D A +    M  +    + V +  L+ G  R  ++    
Sbjct: 313 LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 115/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   I +A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AH L  +M  KG+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC ++ +     E   RM + N
Sbjct: 325 DGCCKDGDLDTAFEHRKRMIQEN 347



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 69  RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 248

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/253 (36%), Positives = 139/253 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +LD+M+Q G  P+ F Y++LI G C  GE++ A E+   M +     N VTYNTLI+
Sbjct: 335 ALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIS 394

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK   VEE+  L   + SKGI P V T+N+L  GL   +    A++LF+EM+      
Sbjct: 395 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHP 454

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ID LC  G + EA  L + +    C   +  Y+ LIDG CK  ++E A E+F
Sbjct: 455 DEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIF 514

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  NVVTYN +I G C + ++++A  L   M  +G+ P+  T+N+L+    R 
Sbjct: 515 DEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRA 574

Query: 244 NETSKVVELLHRM 256
            +  K  +++  M
Sbjct: 575 GDIKKAADIVQTM 587



 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 143/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E    +D M   G RP+ F +++L++G C  G +  A E+   M   G   ++ TYN+
Sbjct: 297 IEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNS 356

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK  +VEE++ + ++M+ +   P  VTYNTL   L + +QVE A +L   +    
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N+ I GLC       A ELF  ++   C      Y+ LID LC  G+LE A 
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEAL 476

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G   NVVTYN +I GFC + ++++A ++F +ME +G++ N VT+NTL+ G 
Sbjct: 477 SLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGL 536

Query: 241 IRNNETSKVVELLHRM 256
            +N    +  +L+ +M
Sbjct: 537 CKNRRVEEAAQLMDQM 552



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 136/256 (53%), Gaps = 4/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L+ MI R   PN   Y+TLI   C   +++ A EL   +   G + +V T+N+
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C T +   ++ L+ EM +KG  P   TYN L   L    ++E AL L  EM+ S 
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT IDG CKN  I EA E+F  + +      +  Y+ LIDGLCK  ++E A 
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAA 546

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL P+  TYN ++  FC  G + KA D+   M + G  P+ VT+ TL+LG 
Sbjct: 547 QLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL 606

Query: 241 IRNNETSKVVELLHRM 256
            +       VEL  R+
Sbjct: 607 SKAGR----VELASRL 618



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 1/257 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M  +G  P+ F Y+ LID  C  G ++ A  L   M+ +GC  NVVTYNTLI+
Sbjct: 440 AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLID 499

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K +EE+  ++ EM  +GI   VVTYNTL  GL +  +VE A +L D+M    +  
Sbjct: 500 GFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKP 559

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ +   C+ G I +AA++ +T+    CE     Y  LI GL K G++E A  L 
Sbjct: 560 DKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLL 619

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           +++   G++    TYN +I     + +  +A  LF +M  KG  P+ VT+  +  G C  
Sbjct: 620 RTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSG 679

Query: 243 NNETSKVVELLHRMDER 259
                + V+ L  M ++
Sbjct: 680 GGPIGEAVDFLVEMTDK 696



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 135/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  M   G   N   Y+TLIDGFC    I+ A E+F  M++ G   NVVTYNT
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK + VEE+  L  +ML +G++P   TYN+L         ++ A  +   M  + 
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              ++ TY T I GL K G +  A+ L RT+++    L  + Y+ +I  L +  +   A 
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +   G  P+ VTY ++  G C+  G + +A D  ++M  KG  P+  +F  L  G
Sbjct: 652 RLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEG 711

Query: 240 CIRNNETSKVVELLHRM 256
               +    +++L++R+
Sbjct: 712 LCALSMEDTLIKLVNRV 728



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 132/251 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +++ M   G+ P+   ++TL+ GF   G ++ A  +   M   GC  + VT N L++GYC
Sbjct: 233 MMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYC 292

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   +EE L+   EM ++G RP   T+N+L +GL  I  V+HAL++ D M       +  
Sbjct: 293 KEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIF 352

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN+ I GLCK G + EA E+   + +         Y+ LI  LCK  ++E A EL + L
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G++P+V T+N +I G C       A +LF +M+ KG  P+  T+N L+         
Sbjct: 413 TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRL 472

Query: 247 SKVVELLHRMD 257
            + + LL  M+
Sbjct: 473 EEALSLLKEME 483



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 128/249 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG++P+   ++ LI   C   +I  A  +   M   G   +  T+ TL+ G+ +  +
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +L +  +M++ G   + VT N L HG  +  ++E  L   DEM +     +  T+N+
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++GLC+ G++  A E+   +     +  I  Y+ LI GLCK+G++E A E+   +    
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             PN VTYN +I   C + Q+++A +L   + +KG+ P+  TFN+L+ G    N     +
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441

Query: 251 ELLHRMDER 259
           EL   M  +
Sbjct: 442 ELFEEMKTK 450



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 101/211 (47%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   +  TYN L+N       ++    + S M+S+GI+P V T+N L   L   HQ+  A
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPA 230

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + + +EM    ++ +  T+ T + G  + G +  A  +   +    C       + L+ G
Sbjct: 231 ILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHG 290

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            CK G++E        +   G  P+  T+N +++G C  G +  A ++   M  +G  P+
Sbjct: 291 YCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPD 350

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             T+N+L+ G  +  E  + VE+L++M  R+
Sbjct: 351 IFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  RL   M++  V P+ F YS LI+G C  G++D A +LF+ M   G + N VT+ T
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C T   +  + +Y +ML KG++P V+TYNTL +GL ++  +  A KL  EM    
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   IDG CK G +  A E+ + +     EL   A++ LI G C+ G++  A 
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + +   G+ P+  TY ++IHGFC  G +     L  +M+  G  P  VT+N L+ G 
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL  M
Sbjct: 516 CKQGQMKNANMLLDAM 531



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 138/257 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   + +RG+RP    ++TLI+G+C +G +D+   L   M  N    +V TY+ 
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSV 300

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++++  L+ EM  +G+ P  VT+ TL +G     + +  ++++ +M    
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYNT I+GLCK G + EA +L   +     +     Y+ LIDG CK G LE+A 
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ + + + G+  + V +  +I GFC +GQ+ +A     +M   G+ P+  T+  ++ G 
Sbjct: 421 EIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGF 480

Query: 241 IRNNETSKVVELLHRMD 257
            +  +     +LL  M 
Sbjct: 481 CKKGDVKTGFKLLKEMQ 497



 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 126/244 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+   ++ L+   C   +I+ A+ LF  +   G    VV++NTLINGYCK+ ++++ 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L   M+   + P V TY+ L +GL +  Q++ A KLF EM    +     T+ T I+G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            C  G      E+++ +     +  +  Y+ LI+GLCK+G L  A +L   + + GL P+
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             TY ++I G C +G ++ A ++  +M  +G+  + V F  L+ G  R  +  +    L 
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459

Query: 255 RMDE 258
            M E
Sbjct: 460 EMLE 463



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 126/256 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           +S    ++  RG   +  V+S L++ +  +G    A + F  +  +       +   L +
Sbjct: 139 SSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFD 198

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K      +   Y E+L  G  P V  +N L H L + H++  A  LF E+    +  
Sbjct: 199 RLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRP 258

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              ++NT I+G CK+G + +   L R +   +    +  YS LI+GLCK G+L+ A +LF
Sbjct: 259 TVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLF 318

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL+PN VT+  +I+G C  G+ D   +++  M  KGV P+ +T+NTL+ G  + 
Sbjct: 319 LEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKV 378

Query: 244 NETSKVVELLHRMDER 259
            +  +  +L+  M +R
Sbjct: 379 GDLREAKKLVIEMTQR 394



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 35/168 (20%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---------------FVS 45
           + EA +L+  M QRG++P+ F Y+ LIDG C  G+++ A E+               F +
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTA 440

Query: 46  MDINGCMHNVV--------------------TYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           +    C    V                    TY  +I+G+CK  DV+    L  EM   G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
             P VVTYN L +GL +  Q+++A  L D M +  V  +  TYN  ++
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 145/257 (56%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +D A R++ LM + G  +PN   ++++++G C  G ++ AR++F  M   G   +VV+YN
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL++GYCK   + ESL ++SEM  +G+ P VVT+ +L H   +   +E A+ L  +M+  
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     T+   IDG CK G++ +A      +R    +  +  Y+ LI+G CK+G+++ A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL + +    + P+VVTY+ +I G+C  G +D A  L   M  KGV P+ +T+++L+ G
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 240 CIRNNETSKVVELLHRM 256
                  +   EL   M
Sbjct: 443 LCEEKRLNDACELFENM 459



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 138/253 (54%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L+  M +RG+R N   ++ LIDGFC  G +D A      M   G   +VV YN 
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK   ++ +  L  EM +K ++P VVTY+T+  G  ++  ++ A +L  +M    
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY++ I GLC+   + +A ELF  +  L  +     Y+ LIDG CK G +E A 
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + R G++P+VVTY+++I+G     +  +AH L   +  +   P+ + ++ LML C
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-C 547

Query: 241 IRNNETSKVVELL 253
               E   VV LL
Sbjct: 548 CSKAEFKSVVALL 560



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 150/292 (51%), Gaps = 36/292 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A R L  M++ GV PN + Y+ L+   C  G ++ A  +   M   GC  N VTYNT
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 192

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L+  +C+  +++ +  + S M  +G  +P +VT+N++ +GL +  ++E A K+FDEM   
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFR--TLRVL-------------KCELG-IE-- 161
            +A +  +YNT + G CK G + E+  +F   T R L              C+ G +E  
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312

Query: 162 -----------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                             ++ LIDG CK G L+ A    + + + G+ P+VV YN +I+G
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +C  G+MD A +L  +MEAK V P+ VT++T++ G  +        +L  +M
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 132/289 (45%), Gaps = 50/289 (17%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   ++ M + G++P+   Y+ LI+G+C  G +D AREL   M+      +VVTY+T
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK  +++ +  L  +ML KG+ P  +TY++L  GL E  ++  A +LF+ M    
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY T IDG CK G + +A  L   +        +  YS LI+GL K  + + A 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 181 EL---------------------------FQSLPRV-------GLMPNV----------- 195
            L                           F+S+  +       GLM              
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 196 -----VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                  Y+I+IHG C  G + KA      M   G +PN  +  +L+ G
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 15/236 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L   M+++GV P+A  YS+LI G C    ++ A ELF +M   G   +  TY T
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  +VE++L+L+ EM+ KG+ P VVTY+ L +GL +  + + A +L  ++ H D
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 533

Query: 121 VAAETSTYNTF---------------IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
              +   Y+                 + G C  G + EA ++++++     +L    YS 
Sbjct: 534 PVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSI 593

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           LI G C+ G +  A    + + R G  PN  +   ++ G   +G + +A +   D+
Sbjct: 594 LIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 101/245 (41%), Gaps = 52/245 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + M+Q GV+P+ F Y+TLIDG C  G +++A  L   M   G + +VVTY+ 
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508

Query: 61  LINGYCKTKDVEESLNL------------------------------------------- 77
           LING  K+   +E+  L                                           
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 568

Query: 78  -------YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
                  Y  ML +  +     Y+ L HG      V  AL    +M  S  +  +++  +
Sbjct: 569 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 628

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            + GL + G +VEA    + L +  C L   EA   LID   K G ++   ++   + R 
Sbjct: 629 LVRGLFEEGMVVEADNAIQDL-LTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARD 687

Query: 190 GLMPN 194
           GL+P+
Sbjct: 688 GLLPS 692


>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           velutina]
          Length = 406

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 137/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 168 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTT 227

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L D+M    
Sbjct: 228 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKG 287

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +V A E  + L      L    Y+ LI GLC+ G+   A 
Sbjct: 288 LKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAE 347

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 348 KMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+ V+YNTL +G   +  ++   +L   M 
Sbjct: 120 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 179

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 180 ASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 239

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AHDL  DM  KG+ P+ +T+ TL+
Sbjct: 240 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 299

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +        E   R+ + N
Sbjct: 300 DGCCKEGVLVSAFEHRKRLIQEN 322



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   + V+YNTL+NGY +   
Sbjct: 108 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGV 167

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 168 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTT 227

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   + R G
Sbjct: 228 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKG 287

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +  A +    +  + +  + V +  L+ G  +   +    
Sbjct: 288 LKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAE 347

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 348 KMLREM 353



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 116/244 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 44  RSDIYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWG 103

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 104 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYI 163

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 164 RLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGV 223

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 224 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM 283

Query: 257 DERN 260
             + 
Sbjct: 284 SRKG 287


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 38/289 (13%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + +   Y TLI+G C  GE      L   ++ +    +VV YNT+IN  CK 
Sbjct: 152 DQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKN 211

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL---------------------------F 101
           K + ++ ++YSEM+ KGI P VVTY TL HG                            F
Sbjct: 212 KLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTF 271

Query: 102 EI-----------HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            +             V+ A+ LF+EM+H ++  +  TYN+ IDGLCKN ++  A  L + 
Sbjct: 272 SVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKE 331

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           ++    +  + +Y+ L+DGLCK G+LE A E FQ L   G   NV  YN+MI+G C  G 
Sbjct: 332 MKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGL 391

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +A DL   ME KG  PN +TF T++      +E  K  ++L  M  R
Sbjct: 392 FGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIAR 440



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 120/219 (54%), Gaps = 3/219 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK--- 67
           MI +G+ P+   Y+TLI GFC+ G++  A  L   M +     +V T++ LI+   K   
Sbjct: 224 MIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGK 283

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K V+E+++L+ EM  K + P +VTYN+L  GL + H +E A+ L  EM+   +  +  +
Sbjct: 284 KKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYS 343

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y   +DGLCK G +  A E F+ L V  C L +  Y+ +I+GLCK G    A +L   + 
Sbjct: 344 YTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKME 403

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
             G MPN +T+  +I       + DKA  +  +M A+G+
Sbjct: 404 GKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 120/251 (47%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
            +LM+     P  F+++ ++              LF   + NG   ++ T + LIN +C 
Sbjct: 46  FNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 105

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              +  + ++++ +L +G  P  +T NTL  GL    +++  L   D++       +  +
Sbjct: 106 QAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVS 165

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y T I+GLCK G     A L R L     +  +  Y+ +I+ LCK   L  A +++  + 
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 225

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G+ P+VVTY  +IHGFC  G+M +A  L  +M+ K + P+  TF+ L+    +  +  
Sbjct: 226 VKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKK 285

Query: 248 KVVELLHRMDE 258
            V E +   +E
Sbjct: 286 MVDEAMSLFEE 296


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 143/257 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + D +I  G RP+   +++LIDG+ L G+I++A  +  +M   G   +VV+YNTLI
Sbjct: 526 EAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLI 585

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   +++ L L+ EMLSKG++PT +TY  + HGLF   +   A K+  EM  S   
Sbjct: 586 DGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTT 645

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + ST    + GLC+N    EA  +F+ L  +  +  I   + +ID + K+ K E A EL
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKEL 705

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+   GL+PN  TY +MI     +G +++A ++F  ME  G AP+    N ++   + 
Sbjct: 706 FDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLE 765

Query: 243 NNETSKVVELLHRMDER 259
             E  K    + ++D +
Sbjct: 766 KGEIVKAGNYMFKVDGK 782



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 120/238 (50%), Gaps = 2/238 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYN 59
           D  + LL  M + GV P+   Y+T++   C      RA +L  +M     GC  NVVTYN
Sbjct: 172 DVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYN 231

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+I+G  +  +V ++ NL+ EM+ +G+ P VVTY ++   L +   ++ A  +  +M  +
Sbjct: 232 TVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN 291

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TYN  I G   +G   E A +FR +        I   +  +  LCK GK + A
Sbjct: 292 GFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEA 351

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            E F S+   G  PN+VTY++++HG+  +G      +LF  ME  G+  +   FN ++
Sbjct: 352 AEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVI 409



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 5/260 (1%)

Query: 2   DEASRLLDL---MIQR--GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV 56
             + R LDL   M+++  G  PN   Y+T+I G    GE+ +A  LF  M   G + +VV
Sbjct: 204 SRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVV 263

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           TY ++I+  CK + ++++  +  +M+S G +P  VTYN + HG     Q +    +F EM
Sbjct: 264 TYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREM 323

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               +     T N+++  LCK+G   EAAE F ++     +  +  YS L+ G    G  
Sbjct: 324 TSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCF 383

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
                LF S+   G++ +   +NI+I  +   G MD+   +F  M+ +GV P+  T+  +
Sbjct: 384 VDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIV 443

Query: 237 MLGCIRNNETSKVVELLHRM 256
           +    R    +  ++  ++M
Sbjct: 444 IAAFSRMGRLADAMDKFNQM 463



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 124/259 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   M+Q+GV P+   Y+++ID  C    +D+A  +   M  NG   N VTYN 
Sbjct: 243 VSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNC 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY  +   +E+  ++ EM S+G+ P +VT N+    L +  + + A + FD M    
Sbjct: 303 MIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKG 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  + G    G  V+   LF ++           ++ +ID   K G ++   
Sbjct: 363 HKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETM 422

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G++P+  TY I+I  F   G++  A D F  M A G+ P  + +++L+ G 
Sbjct: 423 LIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGF 482

Query: 241 IRNNETSKVVELLHRMDER 259
             +    K  EL+  M  R
Sbjct: 483 CMHGNLVKAKELVSEMMSR 501



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDE   +   M ++GV P+A  Y  +I  F   G +  A + F  M   G     + Y++
Sbjct: 418 MDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHS 477

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+C   ++ ++  L SEM+S+GI RP +V +N++ + L +  +V  A  +FD + H 
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+N+ IDG    G I +A  +   +     E  + +Y+ LIDG C+ G+++  
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDG 597

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF  +   G+ P  +TY I++HG  NDG+   A  +  +M   G   +  T   ++ G
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657

Query: 240 CIRNNETSKVVELLHRMDERN 260
             RNN   + + +  ++   N
Sbjct: 658 LCRNNCDDEAIAMFKKLGAMN 678



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 38/246 (15%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR------------------------ 87
           +  V TYN L++  C+T+       L+   L  G++                        
Sbjct: 116 LPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVN 175

Query: 88  ------------PTVVTYNTLFHGLFEIHQVEHALKLFDEM--QHSDVAAETSTYNTFID 133
                       P  ++YNT+   L E  + + AL L   M  +    +    TYNT I 
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GL + G + +A  LF  +        +  Y+ +ID LCK   ++ A  + + +   G  P
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           N VTYN MIHG+   GQ  +   +F +M ++G+ PN VT N+ M    ++ ++ +  E  
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355

Query: 254 HRMDER 259
             M  +
Sbjct: 356 DSMAAK 361



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 15/204 (7%)

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH-------ALKLFD----EM 116
           T   E++ +L+ E+L + I     + N  F  L               A+ LF+    E 
Sbjct: 50  TLSTEDAHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGPSLAVALFNRICREE 109

Query: 117 QHSDVAAET-STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
               VA  T  TYN  +D  C+         LF        ++ +   S L+  L    +
Sbjct: 110 ARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKR 169

Query: 176 LETAWELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK--GVAPNCVT 232
            +    L    +P +G+ P+ ++YN ++   C D +  +A DL   M  K  G +PN VT
Sbjct: 170 SDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVT 229

Query: 233 FNTLMLGCIRNNETSKVVELLHRM 256
           +NT++ G  R  E SK   L H M
Sbjct: 230 YNTVIHGLFREGEVSKACNLFHEM 253



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 13/169 (7%)

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGL--------CKNGYIVEAAELFRTLRV-LK 155
             E A  LFDE+    +     + N F   L        C++G  +  A   R  R   +
Sbjct: 52  STEDAHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGPSLAVALFNRICREEAR 111

Query: 156 CELGIEA---YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
             + +     Y+ L+D  C+  +    + LF    + GL  +V+  +I++    +  + D
Sbjct: 112 PRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSD 171

Query: 213 KAHDLFLD-MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              +L L  M   GV P+ +++NT++     ++ + + ++LLH M +++
Sbjct: 172 DVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKS 220


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 144/257 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + DL+I  G RP+   +++LIDG+ L G++++A  +  +M   G   +VVTY+ L+
Sbjct: 526 EAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALL 585

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   +++ L L+ EMLSKG++PT +TY  + HGLF   +   A K+  EM  S   
Sbjct: 586 DGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTT 645

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + ST    + GLC+N    EA  LF+ L  +  +  I   + +ID + K+ K E A EL
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANEL 705

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+   GL+PN  TY +MI     +G +++A ++F  ME  G AP+    N ++   + 
Sbjct: 706 FDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLE 765

Query: 243 NNETSKVVELLHRMDER 259
             E SK    L ++D +
Sbjct: 766 KGEISKAGNYLSKVDGK 782



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L  MI  G  P+   Y+ +I G+ + G+      +F  M   G M ++ T N+
Sbjct: 278 MDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNS 337

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++  CK    +E+   +  M +KG +P +VTY+ L HG      V   L LF+ M+ + 
Sbjct: 338 YMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNG 397

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+ S YN  ID   K G + EA  +F  ++          Y  +I    ++G+L  A 
Sbjct: 398 IVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAM 457

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA-PNCVTFNTLM 237
           + F  +  +GL P+ + YN +I GFC  G + KA +L  +M ++G+  PN V FN+++
Sbjct: 458 DKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSII 515



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 134/261 (51%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  +   M +RGV P+A+ Y T+I  F   G +  A + F  M   G   + + YN+
Sbjct: 418 MDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNS 477

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+C   ++ ++  L SEM+S+GI RP  V +N++ + L +  +V  A  +FD + H 
Sbjct: 478 LIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHI 537

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+N+ IDG    G + +A  +   +  +  E  +  YS L+DG C+ G+++  
Sbjct: 538 GERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDG 597

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+ +   G+ P  +TY I++HG  NDG+   A  +  +M   G   +  T   ++ G
Sbjct: 598 LILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657

Query: 240 CIRNNETSKVVELLHRMDERN 260
             RNN   + + L  ++   N
Sbjct: 658 LCRNNCDDEAIALFKKLGAMN 678



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 134/259 (51%), Gaps = 5/259 (1%)

Query: 3   EASRLLDL---MIQR--GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
            + R LDL   M+++  G  PN   Y+T+I GF   GE+ +A  LF  M   G + +VVT
Sbjct: 205 RSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVT 264

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y++ I+  CK + ++++  +  +M+S G  P  VTYN + HG   + Q +    +F EM 
Sbjct: 265 YSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMT 324

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +  +  T N+++  LCK+G   EAAE F ++     +  +  YS L+ G    G + 
Sbjct: 325 RRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVV 384

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               LF S+   G++ +   YNI+I  +   G MD+A  +F  M+ +GV P+  T+ T++
Sbjct: 385 DMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444

Query: 238 LGCIRNNETSKVVELLHRM 256
               R    +  ++  ++M
Sbjct: 445 AAFSRMGRLADAMDKFNQM 463



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 2/260 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYN 59
           D  + LL  M + GV P+   YST++   C      RA +L  +M     GC  NVV+YN
Sbjct: 172 DAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYN 231

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+I+G+ +  +V ++ NL+ EM+ +G+ P VVTY++    L +   ++ A  +  +M  +
Sbjct: 232 TVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISN 291

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TYN  I G    G   E A +FR +        I   +  +  LCK GK + A
Sbjct: 292 GFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEA 351

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E F S+   G  P++VTY++++HG+  +G +    +LF  ME  G+  +   +N L+  
Sbjct: 352 AEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDA 411

Query: 240 CIRNNETSKVVELLHRMDER 259
             +     + + +  +M ER
Sbjct: 412 YGKRGMMDEAMLIFTQMQER 431



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 3/191 (1%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           +  V TYN L++  C+         L+   L  G++  V+  N L   L    + + A+ 
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175

Query: 112 -LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLID 168
            L   M    V  +T +Y+T +  LC++     A +L  T+  +   C   + +Y+ +I 
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  + G++  A  LF  + + G++P+VVTY+  I   C    MDKA  +   M + G  P
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295

Query: 229 NCVTFNTLMLG 239
           + VT+N ++ G
Sbjct: 296 DKVTYNCMIHG 306



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 9/175 (5%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           PTV TYN L       H+      LF     + +  +    N  +  LC   +   + + 
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLC---HAKRSDDA 173

Query: 148 FRTLRVLKCELGIE----AYSCLIDGLCKIGKLETAWELFQSLPRV--GLMPNVVTYNIM 201
              L     ELG+E    +YS ++  LC+  + + A +L  ++ +   G  PNVV+YN +
Sbjct: 174 VNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTV 233

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           IHGF  +G++ KA +LF +M  +GV P+ VT+++ +    +     K   +L +M
Sbjct: 234 IHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM 288



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 93/210 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+   L   M+ +GV+P    Y  ++ G    G    A+++   M  +G   ++ T   
Sbjct: 594 IDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGI 653

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G C+    +E++ L+ ++ +  ++  +   NT+   ++++ + E A +LFD +  + 
Sbjct: 654 ILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATG 713

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    STY   I  L K G + EA  +F  +    C       + +I  L + G++  A 
Sbjct: 714 LVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAG 773

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                +    +     T ++M+  F   G+
Sbjct: 774 NYLSKVDGKTISLEASTASLMLSLFSRKGK 803


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 136/249 (54%), Gaps = 2/249 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   G  PN   Y++LIDG C   E DRA+ELF  M    C  ++VTYNTL++G  +T  
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E ++ L+ EML +     V+++N L  GL    ++E AL+ F +M     +    TY+ 
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGLCK   + +A EL  +++   C   +  Y+ L+DGLCK  K+  AWE+ + +   G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +PN+VTYN ++HG C   ++  A  L  DM  +G  PN VT+ TL+ G  +        
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 251 ELLHRMDER 259
            +L  M ++
Sbjct: 239 AMLADMIDK 247



 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 135/240 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+  M  RG  PN   Y TLIDG C  G +  A  +   M   G   +++ YN LI
Sbjct: 201 DALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLI 260

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   V+ES+ L    +S GI+P VVTY+++ +GL   ++++ A +L   ++     
Sbjct: 261 NGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCP 320

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   Y+T IDGLCK G + EA +L+  +    C+  +  YS LIDGLCK G+++ A  L
Sbjct: 321 PDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLL 380

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R+G  P+ +TYN +I G C+   +D+A +L  +ME    AP+ VT+N L+ G  R
Sbjct: 381 LARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 440



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 140/257 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M+  G  PN   Y++L+ G C    +  A  L   M   GC  NVVTY TLI+
Sbjct: 167 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 226

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   V+++  + ++M+ KG  P ++ YN L +GL +  QV+ ++ L        +  
Sbjct: 227 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 286

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY++ I GLC++  + EA  L   ++   C   +  YS LIDGLCK GK++ A++L+
Sbjct: 287 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 346

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G   +VVTY+ +I G C  G++D+AH L   M   G  P+ +T+N+L+ G    
Sbjct: 347 EVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDL 406

Query: 244 NETSKVVELLHRMDERN 260
           N   + +EL+  M+  N
Sbjct: 407 NHLDEAIELVEEMERSN 423



 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 129/241 (53%), Gaps = 1/241 (0%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +   ++ L+ G C  G+I+ A E F  MD + C  NV+TY+ LI+G CK   V +++ L 
Sbjct: 78  DVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLIDGLCKANRVSQAVELL 136

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M ++G  P V+TY  L  GL +  +V  A ++  EM  +       TYN+ + GLC+ 
Sbjct: 137 ESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRA 196

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             + +A  L R +    C   +  Y  LIDGLCK+G+++ A  +   +   G  P+++ Y
Sbjct: 197 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 256

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N++I+G C   Q+D++  L     + G+ P+ VT+++++ G  R+N   +   LL  +  
Sbjct: 257 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 316

Query: 259 R 259
           R
Sbjct: 317 R 317



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 1/221 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE+  LL   +  G++P+   YS++I G C +  +D A  L + +   GC  +V+ Y+T
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 328

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V+E+ +LY  M   G    VVTY+TL  GL +  +V+ A  L   M    
Sbjct: 329 LIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET-A 179
               T TYN+ I GLC   ++ EA EL   +    C      Y+ LI G+C++ ++++ A
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAA 448

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
            + FQ +   G++P+ +TY+I++ G      + +   L LD
Sbjct: 449 LDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 489



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR-ELFVSMDINGCMHNVVTYN 59
           +DEA  L++ M +    P+A  Y+ LI G C    +D A  + F  M  NG + + +TY+
Sbjct: 409 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYS 468

Query: 60  TLINGYCKTKDVEESLNLY-SEMLSKGIR 87
            L+ G  K+KD+ E  +L   +M+  G R
Sbjct: 469 ILLEGLKKSKDLHELRHLVLDQMVQLGYR 497


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 141/248 (56%), Gaps = 1/248 (0%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++ GV P+ F+Y++LI GFC  G+I++A +L+  M  NG   N+V YNTLING CK  +V
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEV 712

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
            ++  L+ E+  K + P VVTY+T+  G  +   +  A KLFDEM    ++ +   Y   
Sbjct: 713 TKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 772

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDG  K G + +A  LF   +  K    + A++ LID  CK GK+  A ELF  +    L
Sbjct: 773 IDGCGKEGNLEKALSLFHEAQQ-KSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKL 831

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PN+VTY I+I  +     M++A  LFLDME + + PN +T+ +L+L   +     K++ 
Sbjct: 832 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS 891

Query: 252 LLHRMDER 259
           L   M+ R
Sbjct: 892 LFKDMEAR 899



 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 147/255 (57%), Gaps = 1/255 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++AS+L D M+  G+ PN  VY+TLI+G C  GE+ +ARELF  ++    + +VVTY+T
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK+ ++ E+  L+ EM+SKGI P    Y  L  G  +   +E AL LF E Q   
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 796

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V +  S +N+ ID  CK+G ++EA ELF  +   K    I  Y+ LID   K   +E A 
Sbjct: 797 VGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAE 855

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +    ++PN +TY  ++  +   G   K   LF DMEA+G+A + + +  +    
Sbjct: 856 QLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAY 915

Query: 241 IRNNETSKVVELLHR 255
            +  ++ + ++LL++
Sbjct: 916 CKEGKSLEALKLLNK 930



 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 143/260 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  M ++G++PNA  Y   I+ +  +GEI  A   F  M  +G + N V Y  
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C   +  E+L+ +  ML KG+ P +  Y+ + H L +  + + A+ +F +   + 
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   YN+ I G CK G I +A++L+  +        I  Y+ LI+GLCK+G++  A 
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +    L+P+VVTY+ +I G+C  G + +A  LF +M +KG++P+   +  L+ GC
Sbjct: 717 ELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 776

Query: 241 IRNNETSKVVELLHRMDERN 260
            +     K + L H   +++
Sbjct: 777 GKEGNLEKALSLFHEAQQKS 796



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +  LM+++G+ P+   Y+ L+DGFC       A+ +F SM  +G   N  TY  
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K  ++EE+L +  EM+++G++  VVTYN +  G+ +  ++  A+ LF+EM  + 
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T TYN  IDG  K+  + +A EL   ++  K       YS LI GLC    L+ A 
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + R G+ PNV  Y  +I  +  + + + A +L   M A GV P+   +N L++G 
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  +   LL  M E+
Sbjct: 532 CRAKKVEEAKMLLVDMGEK 550



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 120/245 (48%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +++  +PN F Y+  I G C TG +D A E+   M   G   +  TY  L++G+CK K  
Sbjct: 268 MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRS 327

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E+  ++  M S G+ P   TY  L  G  +   +E AL++ DEM    +     TYN  
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAM 387

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I G+ K G + +A  LF  + +   E     Y+ LIDG  K   +  A EL   +    L
Sbjct: 388 IGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            P+  TY+++I G C+   + KA+++   M   GV PN   + TL+   ++ +     +E
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 252 LLHRM 256
           LL  M
Sbjct: 508 LLKIM 512



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R    M+  G+ PN  +Y+ LI G C  G    A   F  M   G + ++  Y+ +I+
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIH 634

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K    +E++ ++ + L  G+ P V  YN+L  G  +   +E A +L+DEM H+ +  
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINP 694

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YNT I+GLCK G + +A ELF  +        +  YS +IDG CK G L  A++LF
Sbjct: 695 NIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLF 754

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+ P+   Y I+I G   +G ++KA  LF + + K V  +   FN+L+    ++
Sbjct: 755 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKH 813

Query: 244 NETSKVVELLHRMDER 259
            +  +  EL   M ++
Sbjct: 814 GKVIEARELFDDMVDK 829



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 123/250 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  L + M+  G+ P+ + Y+ LIDG+  + ++ +A EL   M       +  TY+ 
Sbjct: 397 MAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C + D++++  +  +M+  G++P V  Y TL     +  + E A++L   M  + 
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   YN  I GLC+   + EA  L   +     +     Y   I+   K G+++ A 
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +   G++PN V Y I+I G C+ G   +A   F  M  KG+ P+   ++ ++   
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL 636

Query: 241 IRNNETSKVV 250
            +N +T + +
Sbjct: 637 SKNGKTKEAM 646



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 5/240 (2%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  V+   ID F + G ++ A  +F++    G    ++  N L+    K   +     +Y
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M+   I P V TY  +     ++  V     +  EM+  +      TYN FI GLC+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQT 289

Query: 139 GYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           G + EA E+ + +  ++  LG +   Y+ L+DG CK  + + A  +F+S+P  GL PN  
Sbjct: 290 GAVDEALEVKKLM--MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  +I GF  +G +++A  +  +M  +G+  N VT+N ++ G  +  E +K + L + M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 35/287 (12%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDG------------------------------- 29
            + EA +L D MI +G+ P+ ++Y  LIDG                               
Sbjct: 747  LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSL 806

Query: 30   ---FCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
               FC  G++  ARELF  M       N+VTY  LI+ Y K + +EE+  L+ +M ++ I
Sbjct: 807  IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 866

Query: 87   RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
             P  +TY +L     +I      + LF +M+   +A +   Y       CK G  +EA +
Sbjct: 867  IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 926

Query: 147  LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
            L     V   +L  + +  LI  LCK  ++ T  EL   + +  L  +  T N ++ GF 
Sbjct: 927  LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 986

Query: 207  NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
              G  D+A  +   M+  G  P  ++  T  +   R++  S + ++L
Sbjct: 987  KSGNEDEASKVLGVMQRLGWVPTSLSL-TDSISTGRDDMKSDISQVL 1032



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 99/206 (48%), Gaps = 1/206 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N+  ++  I+ +     + E+ +++   +S+G  PT++  N L   L + + +    K++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M  + +  +  TY   I   CK G +++   +   +   +C+  +  Y+  I GLC+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQT 289

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G ++ A E+ + +   GL P+  TY +++ GFC   +  +A  +F  M + G+ PN  T+
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
             L+ G I+     + + +   M  R
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITR 375


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 145/257 (56%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +D A R++ LM + G  +PN   ++++++G C  G ++ AR++F  M   G   +VV+YN
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL++GYCK   + ESL ++SEM  +G+ P VVT+ +L H   +   +E A+ L  +M+  
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     T+   IDG CK G++ +A      +R    +  +  Y+ LI+G CK+G+++ A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL + +    + P+VVTY+ +I G+C  G +D A  L   M  KGV P+ +T+++L+ G
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 240 CIRNNETSKVVELLHRM 256
                  +   EL   M
Sbjct: 443 LCEEKRLNDACELFENM 459



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 138/253 (54%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L+  M +RG+R N   ++ LIDGFC  G +D A      M   G   +VV YN 
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK   ++ +  L  EM +K ++P VVTY+T+  G  ++  ++ A +L  +M    
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY++ I GLC+   + +A ELF  +  L  +     Y+ LIDG CK G +E A 
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + R G++P+VVTY+++I+G     +  +AH L   +  +   P+ + ++ LML C
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-C 547

Query: 241 IRNNETSKVVELL 253
               E   VV LL
Sbjct: 548 CSKAEFKSVVALL 560



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 150/292 (51%), Gaps = 36/292 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A R L  M++ GV PN + Y+ L+   C  G ++ A  +   M   GC  N VTYNT
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 192

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L+  +C+  +++ +  + S M  +G  +P +VT+N++ +GL +  ++E A K+FDEM   
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFR--TLRVL-------------KCELG-IE-- 161
            +A +  +YNT + G CK G + E+  +F   T R L              C+ G +E  
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312

Query: 162 -----------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                             ++ LIDG CK G L+ A    + + + G+ P+VV YN +I+G
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +C  G+MD A +L  +MEAK V P+ VT++T++ G  +        +L  +M
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 132/289 (45%), Gaps = 50/289 (17%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   ++ M + G++P+   Y+ LI+G+C  G +D AREL   M+      +VVTY+T
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK  +++ +  L  +ML KG+ P  +TY++L  GL E  ++  A +LF+ M    
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY T IDG CK G + +A  L   +        +  YS LI+GL K  + + A 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 181 EL---------------------------FQSLPRV-------GLMPNV----------- 195
            L                           F+S+  +       GLM              
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 196 -----VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                  Y+I+IHG C  G + KA      M   G +PN  +  +L+ G
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 15/236 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L   M+++GV P+A  YS+LI G C    ++ A ELF +M   G   +  TY T
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  +VE++L+L+ EM+ KG+ P VVTY+ L +GL +  + + A +L  ++ H D
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 533

Query: 121 VAAETSTYNTF---------------IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
              +   Y+                 + G C  G + EA ++++++     +L    YS 
Sbjct: 534 PVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSI 593

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           LI G C+ G +  A    + + R G  PN  +   ++ G   +G + +A +   D+
Sbjct: 594 LIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 147/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL LM  +G+ PN   Y+ +I+G C  G++    E+   M     + + VT+NT
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYC   +  ++L L++EM+  G+ P VVTY TL + + +   +  A++  D+M+   
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T IDG  + G++ +A ++ + +        I  Y+ LI+G C +G++E A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L Q +   G +P+VV+Y+ +I GFC + +++KA  L ++M AKG++P+  T+++L+ G 
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493

Query: 241 IRNNETSKVVELLHRM 256
            +     +V +L   M
Sbjct: 494 CKQRRLGEVCDLFQEM 509



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 35/277 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ GV PN + Y+ LI GFC  G ++     F  M+ NGC+ NVVTYNT+I+ YCK + 
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E+  L   M  KG+ P +++YN + +GL    Q++   ++ +EM       +  T+NT
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 131 FIDG-----------------------------------LCKNGYIVEAAELFRTLRVLK 155
            I+G                                   +CK G +  A E    +R   
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                  Y+ LIDG  + G L+ A+++ + +   G  P ++TYN +I+G C  G+M+ A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            L  +M  +G  P+ V+++T++ G  RN E  K  +L
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 131/240 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A   LD M  RG+ PN   Y+TLIDGF   G + +A ++   M  NG    ++TYN 
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C    +E++  L  EM+ +G  P VV+Y+T+  G     ++E A +L  EM    
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ + +TY++ I GLCK   + E  +LF+ +  L        Y+ LI+  C  G L+ A 
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G  P++VTYN++I+GF    +  +A  L L +  +   PN +T+NTL+  C
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 133/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ PN   Y+TLI+  C  G ++RA E    M   G   N  TY TLI+G+ +   
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++  +  EM+  G  PT++TYN L +G   + ++E A  L  EM       +  +Y+T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G C+N  + +A +L   +        +  YS LI GLCK  +L    +LFQ +  +G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ VTY  +I+ +C +G +DKA  L  +M  KG +P+ VT+N L+ G  + + T +  
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 251 ELLHRM 256
            LL ++
Sbjct: 574 RLLLKL 579



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++AS LL  MI+RG  P+   YST+I GFC   E+++A +L V M   G   +V TY++
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK + + E  +L+ EMLS G+ P  VTY +L +       ++ AL+L DEM    
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID------------ 168
            + +  TYN  I+G  K     EA  L   L   +       Y+ LID            
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608

Query: 169 ---GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
              G C  G +  A  + +S+ + G   N   YN++IHG    G ++KA++L+ +M   G
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG 668

Query: 226 VAPNCVTFNTL 236
            AP+ VT   L
Sbjct: 669 FAPHSVTIMAL 679



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 1/211 (0%)

Query: 50  GCMHNVVTYNTLINGYCKTKD-VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           G M  V++YN +++   +TK  V+ +  ++ EM+  G+ P V TYN L  G      +E 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
            L  F EM+ +       TYNT ID  CK   I EA +L R + +      + +Y+ +I+
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC+ G+++   E+ + + +   +P+ VT+N +I+G+CN G   +A  L  +M   G++P
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           N VT+ TL+    +    ++ +E L +M +R
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 52/207 (25%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLID---------------GFCLTGEIDRARELFVSMD 47
           EA RLL  ++     PN   Y+TLID               GFC+ G ++ A  +  SM 
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630

Query: 48  INGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQV 106
             G   N   YN +I+G+ K  ++E++ NLY EML  G  P  VT   L   L+ E  +V
Sbjct: 631 QKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEV 690

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           E                     N  +D   K+  I EAA       + K  +GI +    
Sbjct: 691 E--------------------LNQLLDYTLKSCRITEAA-------LAKVLIGINS---- 719

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMP 193
                K G ++  + + + +   GL+P
Sbjct: 720 -----KEGNMDAVFNVLKDMALSGLLP 741



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 146 ELFRTLR--VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           +LF+ L+    +C+     +  ++    ++  +  A  +       G MP V++YN ++ 
Sbjct: 116 DLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILD 175

Query: 204 GFCNDGQMDK-AHDLFLDMEAKGVAPNCVTFNTLMLG 239
                 Q  K A  +F +M   GV+PN  T+N L+ G
Sbjct: 176 AVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRG 212


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 141/254 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  L++ M  +G +PN   Y+ LIDGFC  G+++ A  +   M   G   N V YN LI
Sbjct: 400 SALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALI 459

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   + E+L+++ EM SKG +P + T+N+L  GL  + ++E AL L+ +M    V 
Sbjct: 460 SALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVI 519

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A + T+NT I    + G I EA +L   +    C L    Y+ LI  LCK G +E    L
Sbjct: 520 ANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGL 579

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ + R GL P+++T NI+I+GFC  G++  A +   DM  +G +P+ VT+N+L+ G  +
Sbjct: 580 FEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCK 639

Query: 243 NNETSKVVELLHRM 256
                + + L  ++
Sbjct: 640 RGRIQEALNLFEKL 653



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 137/255 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L  M+ +G   N   Y+ LI   C  G+I  A ++F  M   GC  ++ T+N+
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+  ++E++L LY +M+ +G+    VT+NTL H      +++ ALKL ++M    
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  I  LCK G + +   LF  +        I   + LI+G C  GK+  A 
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNAL 612

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E  + +   G  P++VTYN +I+G C  G++ +A +LF  ++A+G+ P+ +T+NTL+   
Sbjct: 613 EFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWL 672

Query: 241 IRNNETSKVVELLHR 255
            R         LL+R
Sbjct: 673 CREGAFDDACFLLYR 687



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 136/288 (47%), Gaps = 32/288 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M + G  PN+ +Y TLID       +D A +L   M + GC  +V T+NT
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL-------- 112
           +I G+C+   V E   L   M+ KG  P  +TY  L HGL +  +++ A  L        
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPN 345

Query: 113 ------------------------FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                                   +D+M ++    +  T++T ++GLCK G    A EL 
Sbjct: 346 VVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELV 405

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +    C+  +  Y+ LIDG CK G+LE A  + + +   G   N V YN +I   C  
Sbjct: 406 NDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKH 465

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G++ +A D+F +M +KG  P+  TFN+L+ G  R +E    + L   M
Sbjct: 466 GKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDM 513



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 123/235 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M  +G +P+ F +++LI G C   E++ A  L+  M + G + N VT+NTLI
Sbjct: 470 EALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLI 529

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + + +  +++E+L L ++ML +G     +TYN L   L +   VE  L LF+EM    + 
Sbjct: 530 HAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLT 589

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T N  I+G C  G +  A E  R +        I  Y+ LI+GLCK G+++ A  L
Sbjct: 590 PSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNL 649

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           F+ L   G+ P+ +TYN +I   C +G  D A  L       G  PN VT+N L+
Sbjct: 650 FEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 130/260 (50%), Gaps = 1/260 (0%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           ++EA+  + D MI  G  P+ F +STL++G C  G    A EL   MD  GC  N+ TY 
Sbjct: 362 LNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYT 421

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+G+CK   +EE+  +  EML+KG     V YN L   L +  ++  AL +F EM   
Sbjct: 422 ILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSK 481

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+N+ I GLC+   + +A  L+R + +         ++ LI    + G+++ A
Sbjct: 482 GCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEA 541

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L   +   G   + +TYN +I   C  G ++K   LF +M  KG+ P+ +T N L+ G
Sbjct: 542 LKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILING 601

Query: 240 CIRNNETSKVVELLHRMDER 259
                +    +E +  M  R
Sbjct: 602 FCTAGKVHNALEFMRDMIHR 621



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 111/205 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  L   M+  GV  N+  ++TLI  F   GEI  A +L   M   GC  + +TYN 
Sbjct: 503 MEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNG 562

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   CKT  VE+ L L+ EM+ KG+ P+++T N L +G     +V +AL+   +M H  
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYN+ I+GLCK G I EA  LF  L+    +     Y+ LI  LC+ G  + A 
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDAC 682

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGF 205
            L       G +PN VT+NI+++ F
Sbjct: 683 FLLYRGVENGFVPNDVTWNILVYNF 707



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 135/286 (47%), Gaps = 32/286 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL-------------------- 42
           E ++L+D MI +G  PN   Y  L+ G C T  ID A+ L                    
Sbjct: 298 EGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFV 357

Query: 43  ------------FVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                       +  M  NG + +V T++TL+NG CK      +L L ++M +KG +P +
Sbjct: 358 RNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNL 417

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            TY  L  G  +  Q+E A  +  EM     +  T  YN  I  LCK+G I EA ++F  
Sbjct: 418 NTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGE 477

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C+  I  ++ LI GLC++ ++E A  L++ +   G++ N VT+N +IH F   G+
Sbjct: 478 MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + +A  L  DM  +G   + +T+N L+    +     K + L   M
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 32/288 (11%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS +   M+ +GV PN + +  ++   C+  E+D A  L   M  +GC+ N + Y TLI+
Sbjct: 194 ASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLID 253

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K   V+E+L L  EM   G  P V T+NT+ +G   +++V    KL D M       
Sbjct: 254 ALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTP 313

Query: 124 ETSTYNTFIDGLCKNGYIVEAAEL-----------FRTLRVLKCELG------------- 159
              TY   + GLCK   I EA  L           F TL       G             
Sbjct: 314 NDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKM 373

Query: 160 --------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
                   +  +S L++GLCK G   +A EL   +   G  PN+ TY I+I GFC  GQ+
Sbjct: 374 INNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQL 433

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++A  +  +M  KG + N V +N L+    ++ +  + +++   M  +
Sbjct: 434 EEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSK 481



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 5/251 (1%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q+G   +  VY  LID             L + M   G +     +  ++  Y +     
Sbjct: 97  QKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPG 156

Query: 73  ESLNLYSEMLSKGI---RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           ++  L  +M  KG+    P+  +YN +   L   +    A  +F +M    V+    T+ 
Sbjct: 157 QATRLLLDM--KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFG 214

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             +  LC    +  A  L R +    C      Y  LID L K  +++ A +L + +  +
Sbjct: 215 LVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLM 274

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+V T+N +I+GFC   ++ +   L   M  KG  PN +T+  LM G  +     + 
Sbjct: 275 GCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEA 334

Query: 250 VELLHRMDERN 260
             LL ++   N
Sbjct: 335 QALLSKVPGPN 345



 Score = 40.4 bits (93), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + +   G++P++  Y+TLI   C  G  D A  L      NG + N VT+N 
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNI 702

Query: 61  LINGYCKTKDVEESLNLYSE 80
           L+  + K  + E     Y++
Sbjct: 703 LVYNFGKQSNSEGQTITYAQ 722


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 147/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL LM  +G+ PN   Y+ +I+G C  G++    E+   M     + + VT+NT
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYC   +  ++L L++EM+  G+ P VVTY TL + + +   +  A++  D+M+   
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T IDG  + G++ +A ++ + +        I  Y+ LI+G C +G++E A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L Q +   G +P+VV+Y+ +I GFC + +++KA  L ++M AKG++P+  T+++L+ G 
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493

Query: 241 IRNNETSKVVELLHRM 256
            +     +V +L   M
Sbjct: 494 CKQRRLGEVCDLFQEM 509



 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 35/277 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ GV PN + Y+ LI GFC  G ++     F  M+ NGC+ NVVTYNT+I+ YCK + 
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E+  L   M  KG+ P +++YN + +GL    Q++   ++ +EM       +  T+NT
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 131 FIDG-----------------------------------LCKNGYIVEAAELFRTLRVLK 155
            I+G                                   +CK G +  A E    +R   
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                  Y+ LIDG  + G L+ A+++ + +   G  P ++TYN +I+G C  G+M+ A 
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            L  +M  +G  P+ V+++T++ G  RN E  K  +L
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 131/240 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A   LD M  RG+ PN   Y+TLIDGF   G + +A ++   M  NG    ++TYN 
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C    +E++  L  EM+ +G  P VV+Y+T+  G     ++E A +L  EM    
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ + +TY++ I GLCK   + E  +LF+ +  L        Y+ LI+  C  G L+ A 
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G  P++VTYN++I+GF    +  +A  L L +  +   PN +T+NTL+  C
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 133/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ PN   Y+TLI+  C  G ++RA E    M   G   N  TY TLI+G+ +   
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++  +  EM+  G  PT++TYN L +G   + ++E A  L  EM       +  +Y+T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G C+N  + +A +L   +        +  YS LI GLCK  +L    +LFQ +  +G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ VTY  +I+ +C +G +DKA  L  +M  KG +P+ VT+N L+ G  + + T +  
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 251 ELLHRM 256
            LL ++
Sbjct: 574 RLLLKL 579



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++AS LL  MI+RG  P+   YST+I GFC   E+++A +L V M   G   +V TY++
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK + + E  +L+ EMLS G+ P  VTY +L +       ++ AL+L DEM    
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID------------ 168
            + +  TYN  I+G  K     EA  L   L   +       Y+ LID            
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608

Query: 169 ---GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
              G C  G +  A  + +S+ + G   N   YN++IHG    G ++KA++L+ +M   G
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG 668

Query: 226 VAPNCVTFNTL 236
            AP+ VT   L
Sbjct: 669 FAPHSVTIMAL 679



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 1/211 (0%)

Query: 50  GCMHNVVTYNTLINGYCKTKD-VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           G M  V++YN +++   +TK  V+ +  ++ EM+  G+ P V TYN L  G      +E 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
            L  F EM+ +       TYNT ID  CK   I EA +L R + +      + +Y+ +I+
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC+ G+++   E+ + + +   +P+ VT+N +I+G+CN G   +A  L  +M   G++P
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           N VT+ TL+    +    ++ +E L +M +R
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 52/207 (25%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLID---------------GFCLTGEIDRARELFVSMD 47
           EA RLL  ++     PN   Y+TLID               GFC+ G ++ A  +  SM 
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630

Query: 48  INGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQV 106
             G   N   YN +I+G+ K  ++E++ NLY EML  G  P  VT   L   L+ E  +V
Sbjct: 631 QKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEV 690

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           E                     N  +D   K+  I EAA       + K  +GI +    
Sbjct: 691 E--------------------LNQLLDYTLKSCRITEAA-------LAKVLIGINS---- 719

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMP 193
                K G ++  + + + +   GL+P
Sbjct: 720 -----KEGNMDAVFNVLKDMALSGLLP 741



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 146 ELFRTLR--VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           +LF+ L+    +C+     +  ++    ++  +  A  +       G MP V++YN ++ 
Sbjct: 116 DLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILD 175

Query: 204 GFCNDGQMDK-AHDLFLDMEAKGVAPNCVTFNTLMLG 239
                 Q  K A  +F +M   GV+PN  T+N L+ G
Sbjct: 176 AVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRG 212


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1164

 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 133/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA      MI +G+ P+  VY+TL+DGFC  G+I  A + F  M       +V+TY  
Sbjct: 755 LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C+  D+ E+  L+ EML +G+ P ++T+  L +G  +   ++ A ++ + M  + 
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY T IDGLCK G +  A EL   +  +  +  I  Y+ +++GLCK G +E A 
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L       GL  + VTY  ++  +C  G+MDKA ++  +M  KG+ P  VTFN LM G
Sbjct: 935 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNG 993



 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 142/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +L++ M Q+G++PN++ Y ++I   C   ++  A E F  M   G + + + Y T
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK  D+  +   + EM S+ I P V+TY  +  G  +I  +  A KLF EM    
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+   ++G CK G+I +A  +   +    C   +  Y+ LIDGLCK G L++A 
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + ++GL PN+ TYN +++G C  G +++A  L  + EA G+  + VT+ TLM   
Sbjct: 900 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959

Query: 241 IRNNETSKVVELLHRM 256
            ++ E  K  E+L  M
Sbjct: 960 CKSGEMDKAQEILTEM 975



 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 1/242 (0%)

Query: 4    ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
            AS+    M  R + P+   Y+ +I GFC  G++  A +LF  M   G   +++T+  L+N
Sbjct: 793  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMN 852

Query: 64   GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            GYCK   ++++  +++ M+  G  P VVTY TL  GL +   ++ A +L  EM    +  
Sbjct: 853  GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 912

Query: 124  ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               TYN+ ++GLCK+G I EA +L               Y+ L+D  CK G+++ A E+ 
Sbjct: 913  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972

Query: 184  QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
              +   GL P +VT+N++++GFC  G ++    L   M AKG+APN  TFN L+   CIR
Sbjct: 973  TEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIR 1032

Query: 243  NN 244
            NN
Sbjct: 1033 NN 1034



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 137/253 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL LM  +G  P+   YST+I+G+C  GE+D+  +L   M   G   N  TY +
Sbjct: 685 INEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGS 744

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   C+   + E+   +SEM+ +GI P  + Y TL  G  +   +  A K F EM   D
Sbjct: 745 IIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRD 804

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I G C+ G +VEA +LF  +     E  I  ++ L++G CK G ++ A+
Sbjct: 805 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAF 864

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   + + G  PNVVTY  +I G C +G +D A++L  +M   G+ PN  T+N+++ G 
Sbjct: 865 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 924

Query: 241 IRNNETSKVVELL 253
            ++    + V+L+
Sbjct: 925 CKSGNIEEAVKLV 937



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 131/239 (54%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            M EA +L   M+ RG+ P+   ++ L++G+C  G I  A  +   M   GC  NVVTY T
Sbjct: 825  MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTT 884

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LI+G CK  D++ +  L  EM   G++P + TYN++ +GL +   +E A+KL  E + + 
Sbjct: 885  LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + A+T TY T +D  CK+G + +A E+   +     +  I  ++ L++G C  G LE   
Sbjct: 945  LNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1004

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L   +   G+ PN  T+N ++  +C    +  A  ++ DM ++GV P+  T+  L+ G
Sbjct: 1005 KLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKG 1063



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 127/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  N   Y+ +I   C  G I+ A  L + M++ G   +V++Y+T+INGYC+  ++++ 
Sbjct: 664 GVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKV 723

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L  +M  KG++P   TY ++   L  I ++  A + F EM    +  +T  Y T +DG
Sbjct: 724 WKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDG 783

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK G I  A++ F  +        +  Y+ +I G C+IG +  A +LF  +   GL P+
Sbjct: 784 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPD 843

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           ++T+  +++G+C  G +  A  +   M   G +PN VT+ TL+ G  +  +     ELLH
Sbjct: 844 IITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 903

Query: 255 RM 256
            M
Sbjct: 904 EM 905



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 131/256 (51%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + +A R+ + MIQ G  PN   Y+TLIDG C  G++D A EL   M   G   N+ TYN+
Sbjct: 860  IKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 919

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++NG CK+ ++EE++ L  E  + G+    VTY TL     +  +++ A ++  EM    
Sbjct: 920  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +     T+N  ++G C +G + +  +L   +           ++CL+   C    L+ A 
Sbjct: 980  LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             +++ +   G+ P+  TY  ++ G CN   M +A  LF +M+ KG + +  T++ L+ G 
Sbjct: 1040 AIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099

Query: 241  IRNNETSKVVELLHRM 256
             +  +  +  E+  +M
Sbjct: 1100 FKRKKFVEAREIFDQM 1115



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 128/238 (53%), Gaps = 8/238 (3%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D A+ LL  M + G++PN F Y+++++G C +G I+ A +L    +  G   + VTY T
Sbjct: 895  LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 954

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L++ YCK+ +++++  + +EML KG++PT+VT+N L +G      +E   KL + M    
Sbjct: 955  LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1014

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
            +A   +T+N  +   C    +  A  +++ +    C  G+E     Y  L+ G C    +
Sbjct: 1015 IAPNATTFNCLVKQYCIRNNLKAATAIYKDM----CSRGVEPDGKTYENLVKGHCNARNM 1070

Query: 177  ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            + AW LFQ +   G   +V TY+++I GF    +  +A ++F  M   G+A +   F+
Sbjct: 1071 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFD 1128



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 105/224 (46%), Gaps = 1/224 (0%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT-KDVEESLNLYSEMLSKGIRPTVVT 92
           G +  AR++F  M   G + +V + N  +    K       ++ ++ E    G+   V +
Sbjct: 612 GMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVAS 671

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           YN + H + ++ ++  A  L   M+      +  +Y+T I+G C+ G + +  +L   ++
Sbjct: 672 YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK 731

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
               +     Y  +I  LC+I KL  A E F  +   G++P+ + Y  ++ GFC  G + 
Sbjct: 732 QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            A   F +M ++ + P+ +T+  ++ G  +  +  +  +L H M
Sbjct: 792 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 74/133 (55%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +++  +LL+ M+ +G+ PNA  ++ L+  +C+   +  A  ++  M   G   +  TY  
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYEN 1059

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L+ G+C  ++++E+  L+ EM  KG   +V TY+ L  G F+  +   A ++FD+M+   
Sbjct: 1060 LVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDG 1119

Query: 121  VAAETSTYNTFID 133
            +AA+   ++ F D
Sbjct: 1120 LAADKEIFDFFSD 1132



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 1/191 (0%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQVEHALKLFDEMQHSDVAAETSTYN 129
           + E+  ++ +ML+ G+  +V + N     L  + ++   A+ +F E     V    ++YN
Sbjct: 614 LPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYN 673

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I  +C+ G I EA  L   + +      + +YS +I+G C+ G+L+  W+L + + + 
Sbjct: 674 IVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK 733

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           GL PN  TY  +I   C   ++ +A + F +M  +G+ P+ + + TL+ G  +  +    
Sbjct: 734 GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAA 793

Query: 250 VELLHRMDERN 260
            +  + M  R+
Sbjct: 794 SKFFYEMHSRD 804


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 136/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   +ID A ELF  M + G + N VT+ T
Sbjct: 176 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 235

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 295

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK+G +  A E  + +      L    Y+ LI GLC+ G    A 
Sbjct: 296 LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAE 355

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 356 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 175

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +   + T+ T
Sbjct: 176 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 235

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 295

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C DG +D A +    M  +    + V +  L+ G  R   +    
Sbjct: 296 LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAE 355

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 356 KMLREM 361



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 115/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 128 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   I +A ELF  + V         ++ LIDG CK G+++
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 247

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AH L  +M  KG+ P+ +T+ TL+
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 307

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC ++ +     E   RM + N
Sbjct: 308 DGCCKDGDLDTAFEHRKRMIQEN 330



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 52  RSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 111

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 171

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 231

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  170 bits (430), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 137/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AH L  +M  KG+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQEN 347



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 1/244 (0%)

Query: 14  RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           RG  R + +V+S LI  +  +G +  A E +     +     + T   ++    K K  +
Sbjct: 65  RGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFK 124

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
                Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT +
Sbjct: 125 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLM 184

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           +G  + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+
Sbjct: 185 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           PN VT+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +   L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304

Query: 253 LHRM 256
           +  M
Sbjct: 305 IDEM 308


>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
 gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
          Length = 244

 Score =  170 bits (430), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 135/231 (58%)

Query: 29  GFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
           G+ L  E+  AR+LF  M   G   +V  YN LINGYCK   ++++  LY+EM+ +G+ P
Sbjct: 3   GYSLCMEVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTP 62

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
             VTYNTL HGL ++ ++  A  LF  M  +    +   Y+  +DGLCK GY+ +A  LF
Sbjct: 63  DKVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLF 122

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           R ++    +  +  Y+ L+D +CK G L+ A ELF  L   GL PNV  Y  +I+G C +
Sbjct: 123 RAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKE 182

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G +D+A + F +ME  G  P+  ++N ++ G +++ + S+ V L+  M +R
Sbjct: 183 GLLDEALEAFRNMEEDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDR 233



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 129/230 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D+MI +G +P+ F Y+ LI+G+C    ID+A++L+  M + G   + VTYNTLI
Sbjct: 12  EARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLI 71

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+ +L+  M   G  P +  Y+ L  GL +   +  A +LF  MQ S + 
Sbjct: 72  HGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLK 131

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YN  +D +CK+G + +A ELF  L V   +  ++ Y+ +I+GLCK G L+ A E 
Sbjct: 132 PDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEA 191

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           F+++   G  P+  +YN++I GF       +A  L  +M  +G   +  T
Sbjct: 192 FRNMEEDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFIADVGT 241


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 140/255 (54%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           +RLL  +    V+P+  +Y+T+I   C    +  A +L+  M + G   NV TYNTLI G
Sbjct: 218 ARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYG 277

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +C   +++E+ +L +EM  K I P V T+N L   L +  +++ A+ LF+EM+H ++   
Sbjct: 278 FCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPN 337

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             TY + IDGLCKN ++  A  L + ++    +  + +Y+ L+D LCK G+LE A + FQ
Sbjct: 338 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQ 397

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            L   G   NV TYN+MI+G C  G      DL   ME KG  P+ +TF T++      +
Sbjct: 398 HLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKD 457

Query: 245 ETSKVVELLHRMDER 259
           E  K  + L  M  R
Sbjct: 458 ENDKAEKFLREMIAR 472



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 117/224 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   MI +G+ PN F Y+TLI GFC+ G +  A  L   M +     +V T+N LI
Sbjct: 251 DACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 310

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +   K   ++E+++L+ EM  K + P +VTY +L  GL + H +E A+ L  +M+   + 
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 370

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y   +D LCK G +  A + F+ L V    L +  Y+ +I+GLCK G      +L
Sbjct: 371 PDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
              +   G MP+ +T+  +I       + DKA     +M A+G+
Sbjct: 431 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 130/245 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV PN    + LI+ FC    I  A  +F ++   G   + +T NTLI G C   +++ +
Sbjct: 123 GVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRA 182

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L  + +++++G +   V+Y TL +GL +  + +   +L  +++   V  +   Y T I  
Sbjct: 183 LYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHC 242

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCKN  + +A +L+  + V      +  Y+ LI G C +G L+ A+ L   +    + P+
Sbjct: 243 LCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPD 302

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T+NI+I     +G++D+A  LF +M+ K + PN VT+ +L+ G  +N+   + + L  
Sbjct: 303 VYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCK 362

Query: 255 RMDER 259
           +M E+
Sbjct: 363 KMKEQ 367



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 114/243 (46%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P  F +  ++              LF     NG   N+ T N LIN +C    +  + ++
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           ++ +L +G  P  +T NTL  GL    +++ AL   D++       +  +Y T I+GLCK
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G     A L R L     +  +  Y+ +I  LCK  ++  A +L+  +   G+ PNV T
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN +I+GFC  G + +A  L  +M+ K + P+  TFN L+    +  +  + + L   M 
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330

Query: 258 ERN 260
            +N
Sbjct: 331 HKN 333


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 136/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 189 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 248

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y  MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 308

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 309 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAE 368

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL PN  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 369 KMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 188

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 189 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 248

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 308

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 309 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAE 368

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 369 KMLREM 374



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 115/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 201 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 260

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AH L  +M  KG+ P+ +T+ TL+
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 320

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 321 DGCCKEGDLDTAFEHRKRMIQEN 343



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 112/240 (46%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + FV+S LI  +  +  +  A E +     +       T   ++    K K  +    
Sbjct: 65  RSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 124

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y  +L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 125 FYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 184

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 185 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 244

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 245 TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEM 304


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 142/260 (54%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +LD M   G  P+   Y+++I   C+ G++  A E+  +M    C  ++VT+NT
Sbjct: 220 VEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNT 276

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   +  +L +  EM  + I P V+TY  L +GL  + QV+ A  L +E+    
Sbjct: 277 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 336

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y + +DGLCK+G I EA +L + + V  C  G+  YS L+ G C+ G +  A 
Sbjct: 337 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAR 396

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   +  + ++P + TYNI++ G   DG + KA  L  D+ A+G  P+ VT+NTL+ G 
Sbjct: 397 EILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 456

Query: 241 IRNNETSKVVELLHRMDERN 260
            + N   +  +L   M  R 
Sbjct: 457 CKANRVREACDLADEMASRG 476



 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 144/261 (55%), Gaps = 5/261 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTYN 59
           D+A +L + M    V+P    Y+T+I G C +G +++AREL   M   G     ++VTYN
Sbjct: 114 DQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYN 173

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TLIN + +   + E+     +M + GI P V+T N L  G+ +   VE AL++ D M+ +
Sbjct: 174 TLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLA 233

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TYN+ I  LC  G +VEAAE+ +T   + C   +  ++ L+DG CK G L  A
Sbjct: 234 GPVPDVITYNSIIHALCVAGKVVEAAEILKT---MSCSPDLVTFNTLLDGFCKAGMLPRA 290

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+ + + R  ++P+V+TY I+++G C  GQ+  A  L  ++  +G  P+ + + +L+ G
Sbjct: 291 LEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDG 350

Query: 240 CIRNNETSKVVELLHRMDERN 260
             ++ E  +  +L+  M  R 
Sbjct: 351 LCKSGEIEEAHKLVKEMSVRG 371



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 132/254 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+ ++++G  P+   Y++L+DG C +GEI+ A +L   M + GC   VV Y++L++GYC
Sbjct: 328 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYC 387

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  +V ++  + +EM+S  + P + TYN +  GL +   +  A+ L  ++       +  
Sbjct: 388 RAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVV 447

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT IDGLCK   + EA +L   +    C         ++ GLC++G+++ AW L   +
Sbjct: 448 TYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEM 507

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R    PNVV Y  +I G C   +MD A  +   M  +GVA +   +  L++        
Sbjct: 508 SRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRV 567

Query: 247 SKVVELLHRMDERN 260
           ++ + +   M  R 
Sbjct: 568 AEAMAMYDEMVARG 581



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 132/262 (50%), Gaps = 7/262 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ +L  M      P+   ++TL+DGFC  G + RA E+   M     + +V+TY  L+
Sbjct: 257 EAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 313

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+   V+ +  L  E++ +G  P V+ Y +L  GL +  ++E A KL  EM      
Sbjct: 314 NGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCR 373

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                Y++ + G C+ G + +A E+   +  +     +  Y+ ++ GL K G +  A  L
Sbjct: 374 TGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSL 433

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L   G +P+VVTYN +I G C   ++ +A DL  +M ++G  PN VT  +++ G  R
Sbjct: 434 ISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCR 493

Query: 243 ----NNETSKVVELLHRMDERN 260
               ++  S VVE+  +    N
Sbjct: 494 VGRVDDAWSLVVEMSRKRHAPN 515



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 127/252 (50%), Gaps = 5/252 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G  PN   +  LI G C  G+  RA E   ++D      +V  +N LI+G  K  +
Sbjct: 53  LLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGN 112

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--QHSDVAAETSTY 128
            ++++ L+  M S  ++P +VTYNT+  GL +   +E A +L +EM  +    A +  TY
Sbjct: 113 PDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTY 172

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT I+   +   I EA      ++       +   + L+ G+CK G +E A E+   +  
Sbjct: 173 NTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKL 232

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G +P+V+TYN +IH  C  G++ +A ++   M     +P+ VTFNTL+ G  +     +
Sbjct: 233 AGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPR 289

Query: 249 VVELLHRMDERN 260
            +E+L  M   N
Sbjct: 290 ALEVLEEMCREN 301



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 2/246 (0%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q G + +   Y+ L+D    +G   R  +++  +  +GC  N+VT+  LI G CK     
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            +L     +    + P V  +N L HGLF+    + A+KLF+ M+ S V  E  TYNT I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139

Query: 133 DGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            GLCK+G + +A EL   +  +  K    I  Y+ LI+   +  ++  A    + +   G
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAG 199

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+V+T NI++ G C DG +++A ++   M+  G  P+ +T+N+++       +  +  
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA 259

Query: 251 ELLHRM 256
           E+L  M
Sbjct: 260 EILKTM 265



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%)

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           + +Y+ L+D L K G      ++++ L   G  PN+VT+ I+I G C  GQ  +A +   
Sbjct: 27  VHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLR 86

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
            ++   VAP+   FN L+ G  ++    + V+L   M+
Sbjct: 87  ALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENME 124


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 137/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M   G AP+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431



 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   +  A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AHDL  +M  KG+ P+  T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQEN 347



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 18/253 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 119

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  + 
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEML 239

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 248 KVVELLHRMDERN 260
           +  +L+  M  + 
Sbjct: 300 QAHDLIDEMSMKG 312


>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
          Length = 548

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 143/257 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   ++DL+I  G RPN   +++L+DG+CL G +  A  L  SM+  G   ++ TYNTL+
Sbjct: 246 EGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 305

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L L+ +ML K +  T V+YN + HGLF+  +   A ++F EM  S +A
Sbjct: 306 DGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEMFHEMIESGMA 365

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY T + GLC+N    EA  L   L  +  +  I  ++ +I  + K+G+++ A EL
Sbjct: 366 VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQEAKEL 425

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P ++TY +MI     +   + A +LF  ME  G  P+    N ++   + 
Sbjct: 426 FAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCILNEIIRMLLN 485

Query: 243 NNETSKVVELLHRMDER 259
             E +K    L ++D++
Sbjct: 486 KGEIAKAGHYLSKIDKK 502



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 4/228 (1%)

Query: 33  TGEIDR---ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPT 89
           TG +DR   A E F  M   G   +   Y  LI G C   D+ ++  L S+MLSKGI P 
Sbjct: 167 TGRLDRLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPP 226

Query: 90  VVTY-NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            + +  ++ + L +  +V     + D + H+       T+N+ +DG C  G + EA  L 
Sbjct: 227 CIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLL 286

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
            ++  +  E  I  Y+ L+DG CK G+++ A  LF+ +    +    V+YNI++HG    
Sbjct: 287 DSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 346

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +   A ++F +M   G+A +  T+ T++ G  RNN T +   LL ++
Sbjct: 347 RRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 394



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  ++ +L+ A E F+ +  +G+  +   Y  +I G CN G + KA +L  DM +KG+ P
Sbjct: 166 GTGRLDRLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPP 225

Query: 229 NCVTFNTLMLGCI----RNNETSKVVELLHRMDER 259
            C+ F T ++  +    R  E   +V+L+    +R
Sbjct: 226 PCIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQR 260


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  169 bits (429), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 137/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AH L  +M  KG+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQEN 347



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 69  RSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  169 bits (429), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 145/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EAS  L  +  RG++P+A  +   I G+  TG++  A + F  M  +G M N   Y  
Sbjct: 435 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+ K  ++ E+L+++  + + G+ P V T +   HGL +  +V+ ALK+F E++   
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I G CK G + +A EL   + +      I  Y+ L+DGLCK G ++ A 
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +P  GL P+ VTY+ MI G+C    + +A  LF +M +KGV P+   +N L+ GC
Sbjct: 615 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 674

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +  K + L   M ++
Sbjct: 675 CKEGDMEKAMNLFREMLQK 693



 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 140/256 (54%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA++  D M+  G+ PN  +Y+ LI+G    G +  A  +F  +   G + +V T + 
Sbjct: 470 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 529

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G  K   V+E+L ++SE+  KG+ P V TY++L  G  +  +VE A +L DEM    
Sbjct: 530 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A     YN  +DGLCK+G I  A +LF  +     E     YS +IDG CK   +  A+
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +P  G+ P+   YN ++HG C +G M+KA +LF +M  KG A   ++FNTL+ G 
Sbjct: 650 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGY 708

Query: 241 IRNNETSKVVELLHRM 256
            ++ +  +  +L   M
Sbjct: 709 CKSCKIQEASQLFQEM 724



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 137/256 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A++LL+ M   G++PN  VYSTLI G+   G I+ AR L   M  +G   ++  YN +I+
Sbjct: 368 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 427

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K   +EE+     E+  +G++P  VT+     G  +  ++  A K FDEM    +  
Sbjct: 428 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 487

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               Y   I+G  K G ++EA  +FR L  L     ++  S  I GL K G+++ A ++F
Sbjct: 488 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 547

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             L   GL+P+V TY+ +I GFC  G+++KA +L  +M  KG+APN   +N L+ G  ++
Sbjct: 548 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 607

Query: 244 NETSKVVELLHRMDER 259
            +  +  +L   M E+
Sbjct: 608 GDIQRARKLFDGMPEK 623



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RLLD M   GV P+ F Y+ +I      G+++ A    + +   G   + VT+  
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I GY KT  + E+   + EML  G+ P    Y  L +G F+   +  AL +F  +    
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T + FI GL KNG + EA ++F  L+       +  YS LI G CK G++E A+
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G+ PN+  YN ++ G C  G + +A  LF  M  KG+ P+ VT++T++ G 
Sbjct: 580 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   ++   L H M  +
Sbjct: 640 CKSENVAEAFSLFHEMPSK 658



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 34/292 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L D M  +G+ PN F+Y+ L+DG C +G+I RAR+LF  M   G   + VTY+T
Sbjct: 575 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 634

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK+++V E+ +L+ EM SKG++P    YN L HG  +   +E A+ LF EM    
Sbjct: 635 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694

Query: 121 VAAETS----------------------------------TYNTFIDGLCKNGYIVEAAE 146
            A   S                                  TY T ID  CK G + EA  
Sbjct: 695 FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 754

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LF+ ++     +    Y+ L+ G  K+G+    + LF+ +   G+ P+ VTY ++I+  C
Sbjct: 755 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 814

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +  + +A  L  ++  KG+       + L+    +  + ++  +LL  M E
Sbjct: 815 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 866



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 9/261 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID---RARELFVSMDINGCMHNVVT 57
           M+EA    + M + G++P+    S LIDGF   G+ID   R +++ VS    G   N++T
Sbjct: 225 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC---GIPINLIT 281

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN LI+G CK   +E++  +   M++ G +P   T+  L  G    H +  AL+L DEM+
Sbjct: 282 YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 341

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             ++     +Y   I+GLC    +  A +L   +     +  +  YS LI G    G++E
Sbjct: 342 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 401

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  L   +   G+ P++  YN +I      G+M++A    L+++ +G+ P+ VTF   +
Sbjct: 402 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 461

Query: 238 LGCIRNNETSKVVELLHRMDE 258
           LG    ++T K+ E     DE
Sbjct: 462 LG---YSKTGKMTEAAKYFDE 479



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 115/239 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  R+ D+M+  G+  N   Y+ LI G C  G++++A E+   M   GC  N  T+  
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC+  ++  +L L  EM  + + P+ V+Y  + +GL     +  A KL ++M  S 
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y+T I G    G I EA  L   +        I  Y+ +I  L K GK+E A 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                +   GL P+ VT+   I G+   G+M +A   F +M   G+ PN   +  L+ G
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 139/289 (48%), Gaps = 36/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M  +GV+P++FVY+ L+ G C  G++++A  LF  M   G     +++NTLI
Sbjct: 647 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLI 705

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK+  ++E+  L+ EM++K I P  VTY T+     +  ++E A  LF EMQ  ++ 
Sbjct: 706 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 765

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELF-----RTLRVLKCELGIEAYS------------- 164
            +T TY + + G  K G   E   LF     + ++  +   G+  Y+             
Sbjct: 766 VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 825

Query: 165 -----------------CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                             LI  LCK   L  A +L   +  +GL P++   + ++  F  
Sbjct: 826 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 885

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G+MD+A  +F  +++ G+ P+  T   L+ G + + ++     L+ ++
Sbjct: 886 AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 114/227 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++G+ PN + Y+ +  G C    ++ A+  F  M   G   +    + LI+G+ +  D
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E L +   M+S GI   ++TYN L HGL +  ++E A ++   M        + T+  
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+G C+   +  A EL   +          +Y  +I+GLC    L  A +L + +   G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L PNVV Y+ +I G+ ++G++++A  L   M   GVAP+   +N ++
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 426



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 18/253 (7%)

Query: 22  VYSTLIDGFCLTGEIDRARELFV------------------SMDINGCMHNVVTYNTLIN 63
           V+  LID +   G +D A  +F                   SM   G + N  TY  +  
Sbjct: 158 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITA 217

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C+ K + E+   + EM   G++P     + L  G      ++  L++ D M    +  
Sbjct: 218 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 277

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  I GLCK G + +AAE+ + +  L C+     +  LI+G C+   +  A EL 
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + +  L+P+ V+Y  MI+G C+   +  A+ L   M   G+ PN V ++TL++G    
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397

Query: 244 NETSKVVELLHRM 256
               +   LL  M
Sbjct: 398 GRIEEARRLLDGM 410



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 113/217 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EAS+L   MI + + P+   Y+T+ID  C  G+++ A  LF  M     + + VTY +
Sbjct: 714 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 773

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GY K     E   L+ +M++KG++P  VTY  + +   +   +  A KL DE+    
Sbjct: 774 LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 833

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  + + ++  I  LCK   + EA++L   +  L  +  + A S L+    + GK++ A 
Sbjct: 834 MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEAT 893

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
            +F+ +  +GL+P+  T   +++G  ND   + A +L
Sbjct: 894 RVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 930



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           V ++ LI+ Y +   ++E+ N++    +  I  +++  N+L                   
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL-----------------RS 199

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M    +   T TY     GLC+   + EA   F  ++    +    A S LIDG  + G 
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++    +   +   G+  N++TYN++IHG C  G+M+KA ++   M   G  PN  TF  
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 236 LMLGCIRNNETSKVVELLHRMDERN 260
           L+ G  R +   + +ELL  M++RN
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRN 344



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 45/82 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EAS+LLD M + G++P+    STL+  F   G++D A  +F  +   G + +  T   
Sbjct: 854 LTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLID 913

Query: 61  LINGYCKTKDVEESLNLYSEML 82
           L+NG     D E++ NL  +++
Sbjct: 914 LVNGNLNDTDSEDARNLIKQLV 935


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  169 bits (429), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 145/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EAS  L  +  RG++P+A  +   I G+  TG++  A + F  M  +G M N   Y  
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+ K  ++ E+L+++  + + G+ P V T +   HGL +  +V+ ALK+F E++   
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 643

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I G CK G + +A EL   + +      I  Y+ L+DGLCK G ++ A 
Sbjct: 644 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 703

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +P  GL P+ VTY+ MI G+C    + +A  LF +M +KGV P+   +N L+ GC
Sbjct: 704 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 763

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +  K + L   M ++
Sbjct: 764 CKEGDMEKAMNLFREMLQK 782



 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 140/256 (54%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA++  D M+  G+ PN  +Y+ LI+G    G +  A  +F  +   G + +V T + 
Sbjct: 559 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSA 618

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G  K   V+E+L ++SE+  KG+ P V TY++L  G  +  +VE A +L DEM    
Sbjct: 619 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 678

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A     YN  +DGLCK+G I  A +LF  +     E     YS +IDG CK   +  A+
Sbjct: 679 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 738

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +P  G+ P+   YN ++HG C +G M+KA +LF +M  KG A   ++FNTL+ G 
Sbjct: 739 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGY 797

Query: 241 IRNNETSKVVELLHRM 256
            ++ +  +  +L   M
Sbjct: 798 CKSCKIQEASQLFQEM 813



 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RLLD M   GV P+ F Y+ +I      G+++ A    + +   G   + VT+  
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I GY KT  + E+   + EML  G+ P    Y  L +G F+   +  AL +F  +    
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T + FI GL KNG + EA ++F  L+       +  YS LI G CK G++E A+
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G+ PN+  YN ++ G C  G + +A  LF  M  KG+ P+ VT++T++ G 
Sbjct: 669 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   ++   L H M  +
Sbjct: 729 CKSENVAEAFSLFHEMPSK 747



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 135/256 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A++LL+ M   G++PN  VYS LI  +   G I+ AR L   M  +G   ++  YN +I+
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K   +EE+     E+  +G++P  VT+     G  +  ++  A K FDEM    +  
Sbjct: 517 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 576

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               Y   I+G  K G ++EA  +FR L  L     ++  S  I GL K G+++ A ++F
Sbjct: 577 NNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 636

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             L   GL+P+V TY+ +I GFC  G+++KA +L  +M  KG+APN   +N L+ G  ++
Sbjct: 637 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 696

Query: 244 NETSKVVELLHRMDER 259
            +  +  +L   M E+
Sbjct: 697 GDIQRARKLFDGMPEK 712



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 34/292 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L D M  +G+ PN F+Y+ L+DG C +G+I RAR+LF  M   G   + VTY+T
Sbjct: 664 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK+++V E+ +L+ EM SKG++P    YN L HG  +   +E A+ LF EM    
Sbjct: 724 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783

Query: 121 VAAETS----------------------------------TYNTFIDGLCKNGYIVEAAE 146
            A   S                                  TY T ID  CK G + EA  
Sbjct: 784 FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 843

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LF+ ++     +    Y+ L+ G  K+G+    + LF+ +   G+ P+ VTY ++I+  C
Sbjct: 844 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 903

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +  + +A  L  ++  KG+       + L+    +  + ++  +LL  M E
Sbjct: 904 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 955



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 125/253 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R+L  M ++G+ PN F+YS +I+G C  G+ID A EL  SM   G + N  TY  +  
Sbjct: 247 AKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITA 306

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C+ K + E+   + EM   G++P     + L  G      ++  L++ D M    +  
Sbjct: 307 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 366

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  I GLCK G + +AAE+ + +  L C+     +  LI+G C+   +  A EL 
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + +  L+P+ V+Y  MI+G C+   +  A+ L   M   G+ PN V ++ L++     
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASE 486

Query: 244 NETSKVVELLHRM 256
               +   LL  M
Sbjct: 487 GRIEEARRLLDGM 499



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 122/238 (51%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + + Y+ L+   C TG++  A+ + + MD  G   N   Y+ +I G C+  D++E++ L 
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M  KG+ P   TY  +  GL    ++  A   F+EMQ + +  + +  +  IDG  + 
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 346

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G I E   +   +      + +  Y+ LI GLCK GK+E A E+ + +  +G  PN  T+
Sbjct: 347 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            ++I G+C +  M +A +L  +ME + + P+ V++  ++ G     + S   +LL +M
Sbjct: 407 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 464



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 9/261 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID---RARELFVSMDINGCMHNVVT 57
           M+EA    + M + G++P+    S LIDGF   G+ID   R +++ VS    G   N++T
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC---GIPINLIT 370

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN LI+G CK   +E++  +   M++ G +P   T+  L  G    H +  AL+L DEM+
Sbjct: 371 YNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 430

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             ++     +Y   I+GLC    +  A +L   +     +  +  YS LI      G++E
Sbjct: 431 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIE 490

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  L   +   G+ P++  YN +I      G+M++A    L+++ +G+ P+ VTF   +
Sbjct: 491 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 550

Query: 238 LGCIRNNETSKVVELLHRMDE 258
           LG    ++T K+ E     DE
Sbjct: 551 LG---YSKTGKMTEAAKYFDE 568



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 119/256 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  R+ D+M+  G+  N   Y+ LI G C  G++++A E+   M   GC  N  T+  
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCL 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC+  ++  +L L  EM  + + P+ V+Y  + +GL     +  A KL ++M  S 
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y+  I      G I EA  L   +        I  Y+ +I  L K GK+E A 
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +   GL P+ VT+   I G+   G+M +A   F +M   G+ PN   +  L+ G 
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588

Query: 241 IRNNETSKVVELLHRM 256
            +     + + +  R+
Sbjct: 589 FKAGNLMEALSIFRRL 604



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 36/289 (12%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA  L   M  +GV+P++FVY+ L+ G C  G++++A  LF  M   G     +++NTLI
Sbjct: 736  EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLI 794

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            +GYCK+  ++E+  L+ EM++K I P  VTY T+     +  ++E A  LF EMQ  ++ 
Sbjct: 795  DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 854

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELF-----RTLRVLKCELGIEAYS------------- 164
             +T TY + + G  K G   E   LF     + ++  +   G+  Y+             
Sbjct: 855  VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 914

Query: 165  -----------------CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                              LI  LCK   L  A +L   +  +GL P++   N ++  F  
Sbjct: 915  RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHE 974

Query: 208  DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G+MD+A  +F  +++ G+ P+  T   L+ G + + ++     L+ ++
Sbjct: 975  AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 103/207 (49%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V TY  L+   CKT D+  +  +  EM  KG+ P    Y+ +  G+ ++  ++ A++L 
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M    +   T TY     GLC+   + EA   F  ++    +    A S LIDG  + 
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 346

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G ++    +   +   G+  N++TYN++IHG C  G+M+KA ++   M   G  PN  TF
Sbjct: 347 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
             L+ G  R +   + +ELL  M++RN
Sbjct: 407 CLLIEGYCREHNMGRALELLDEMEKRN 433



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 113/217 (52%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + EAS+L   MI + + P+   Y+T+ID  C  G+++ A  LF  M     + + VTY +
Sbjct: 803  IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 862

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L+ GY K     E   L+ +M++KG++P  VTY  + +   +   +  A KL DE+    
Sbjct: 863  LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 922

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  + + ++  I  LCK   + EA++L   +  L  +  + A + L+    + GK++ A 
Sbjct: 923  MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEAT 982

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             +F+ +  +GL+P+  T   +++G  ND   + A +L
Sbjct: 983  RVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 1019



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 100/197 (50%)

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           V ++ LI+ Y +   ++E+ N++    +  I  +++  N+L   L +   +E   K+++ 
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M  + +  +  TY   +  LCK G +  A  +   +           YS +I+G+C++G 
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A EL +S+   GL+PN  TY I+  G C   +M++A   F +M+  G+ P+    + 
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 236 LMLGCIRNNETSKVVEL 252
           L+ G +R  +  +V+ +
Sbjct: 339 LIDGFMREGDIDEVLRI 355



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 63/132 (47%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           ++  ID   + G + EAA +F   +     + +   + L+  L K G +E  W+++  + 
Sbjct: 161 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGML 220

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
              +  +V TY  ++   C  G +  A  + ++M+ KG+ PN   ++ ++ G  +  +  
Sbjct: 221 DAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDID 280

Query: 248 KVVELLHRMDER 259
           + VEL   M E+
Sbjct: 281 EAVELKRSMGEK 292



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + EAS+LLD M + G++P+    +TL+  F   G++D A  +F  +   G + +  T   
Sbjct: 943  LTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLID 1002

Query: 61   LINGYCKTKDVEESLNLYSEML 82
            L+NG     D E++ NL  +++
Sbjct: 1003 LVNGNLNDTDSEDARNLIKQLV 1024


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  169 bits (429), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 145/251 (57%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++  G   +   Y TLI G C  GE   A +L   +D      N V YNT+I G CK 
Sbjct: 31  DKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKD 90

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V ++ +LYSEM+SKGI P VVTY+ L  G F + +++ A+ LF+++   ++  +  T+
Sbjct: 91  KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTF 150

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  +DG CK+  + E   +F  +        +  Y+ L+DG   + ++ TA  +F ++ +
Sbjct: 151 NILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQ 210

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P++ +YNI+I+GFC   ++DKA +LF +M  K + PN VT+N+L+ G  ++   S 
Sbjct: 211 GGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISY 270

Query: 249 VVELLHRMDER 259
            ++L+ +M +R
Sbjct: 271 ALQLVDQMHDR 281



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 128/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+ +G+ PN   YS LI GF + G++  A +LF  + +     +  T+N 
Sbjct: 93  VNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNI 152

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK + ++E   +++ M+ +GI P VVTYN+L  G   + +V  A  +F+ M    
Sbjct: 153 LVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGG 212

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +YN  I+G CK   + +A  LF  +        +  Y+ LIDGL K G++  A 
Sbjct: 213 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYAL 272

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G+ PN++TYN +I       Q+DKA  L    + +G+ P+  T+  L+ G
Sbjct: 273 QLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 331



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 123/221 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + +I   ++P+ + ++ L+DGFC   ++   + +F  M   G + +VVTYN+
Sbjct: 128 LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNS 187

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY   K+V  + ++++ M   G+ P + +YN L +G  +I +V+ A+ LF+EM   +
Sbjct: 188 LVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKN 247

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ IDGL K+G I  A +L   +        I  Y+ +ID L K  +++ A 
Sbjct: 248 IIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAI 307

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            L       G+ P++ TY I+I G C  G++  A ++F D+
Sbjct: 308 ALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 100/190 (52%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   N +T NTLI G C    + ++   + ++++ G     V+Y TL HGL ++ +   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           L L   +    V      YNT I G+CK+ ++ +A +L+  +        +  YS LI G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
              +GKL+ A +LF  +    + P+  T+NI++ GFC D +M +   +F  M  +G+ P+
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 230 CVTFNTLMLG 239
            VT+N+L+ G
Sbjct: 182 VVTYNSLVDG 191



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 71/134 (52%)

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T T NT I GLC  G I +A      L  L   L   +Y  LI GLCK+G+   A +L
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q +    +  N V YN +I+G C D  ++ A DL+ +M +KG++PN VT++ L+ G   
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 243 NNETSKVVELLHRM 256
             +    ++L +++
Sbjct: 125 VGKLKDAIDLFNKI 138



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 81/161 (50%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P  +T NTL  GL    Q+  A    D++       +  +Y T I GLCK G    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            +L + +     +L    Y+ +I G+CK   +  A++L+  +   G+ PNVVTY+ +I G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           F   G++  A DLF  +  + + P+  TFN L+ G  ++ +
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRK 162



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%)

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G  PN +T N +I G C  GQ+ +A      + A G   + V++ TL+ G  +  ET  
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 249 VVELLHRMDER 259
            ++LL R+D +
Sbjct: 61  ALDLLQRVDGK 71


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  169 bits (429), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 147/292 (50%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ LL  M+++G+ P+   ++ +   F  TG I RA+ +F  M   G  HNVVTYN++I
Sbjct: 219 EAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSII 278

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +C    +++++ ++  M+ KG  P +VTYN+L HG  E   +  A+    EM ++ + 
Sbjct: 279 GAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLD 338

Query: 123 AETSTYNTFIDGLCKNGYIV-----------------------------------EAAEL 147
            +  T++T I G CK G  V                                   EA  L
Sbjct: 339 PDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSL 398

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           FR L  +  +L I  YS +++G+C  GKL  A ELF  L   G+  +VVTYNIMI+G C 
Sbjct: 399 FRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCK 458

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +G +D A DL + ME  G  P+  T+N  + G +R  E SK  + L  M  +
Sbjct: 459 EGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGK 510



 Score =  140 bits (354), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 126/257 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R +D +   G   + +    +I+G C  G    A      M+   C  +V  Y+ ++
Sbjct: 114 QAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVV 173

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V E+L+L+S+M  KGI+P + TYN L HGL    + + A  L   M    + 
Sbjct: 174 DGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIM 233

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N       K G I  A  +F  +  +  E  +  Y+ +I   C + +++ A E+
Sbjct: 234 PDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEV 293

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + R G +PN+VTYN +IHG+C    M+KA     +M   G+ P+ VT++TL+ G  +
Sbjct: 294 FDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCK 353

Query: 243 NNETSKVVELLHRMDER 259
             +     EL   M + 
Sbjct: 354 AGKPVAAKELFFVMHKH 370



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 122/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  + DLMI++G  PN   Y++LI G+C T  +++A      M  NG   +VVT++T
Sbjct: 287 MKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWST 346

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK      +  L+  M   G  P + T   +  GLF+ H    A+ LF E++  +
Sbjct: 347 LIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 406

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  ++G+C +G + +A ELF  L     ++ +  Y+ +I+GLCK G L+ A 
Sbjct: 407 SDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAE 466

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +L   +   G  P+  TYN+ + G     ++ K+    + M+ KG   N  T   L+
Sbjct: 467 DLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 523



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A  L   M   G   NV T+N +IN  C+        ++   M   G+ P++VT+ T+ +
Sbjct: 45  AISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVN 104

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           GL     V  A++  D ++     ++  T    I+GLCK G+   A    + +    C L
Sbjct: 105 GLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNL 164

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            + AYS ++DGLCK G +  A +LF  +   G+ PN+ TYN +IHG CN  +  +A  L 
Sbjct: 165 DVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLL 224

Query: 219 LDMEAKGVAPNCVTFNTL 236
            +M  KG+ P+  TFN +
Sbjct: 225 ANMMRKGIMPDVQTFNVI 242



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 112/238 (47%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           YS ++DG C  G +  A +LF  M   G   N+ TYN LI+G C     +E+  L + M+
Sbjct: 169 YSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMM 228

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KGI P V T+N +     +   +  A  +F  M H  +     TYN+ I   C    + 
Sbjct: 229 RKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMK 288

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A E+F  +    C   I  Y+ LI G C+   +  A      +   GL P+VVT++ +I
Sbjct: 289 DAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLI 348

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            GFC  G+   A +LF  M   G  P+  T   ++ G  + +  S+ + L   +++ N
Sbjct: 349 GGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 406



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 35/291 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M  +G++PN F Y+ LI G C       A  L  +M   G M +V T+N + 
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 243

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             + KT  +  + +++S M   GI   VVTYN++      ++Q++ A+++FD M      
Sbjct: 244 GRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCL 303

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I G C+   + +A      +     +  +  +S LI G CK GK   A EL
Sbjct: 304 PNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKEL 363

Query: 183 FQSLPRVGLMP-----------------------------------NVVTYNIMIHGFCN 207
           F  + + G +P                                   +++ Y+I+++G C+
Sbjct: 364 FFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCS 423

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            G+++ A +LF  + +KGV  + VT+N ++ G  +        +LL +M+E
Sbjct: 424 SGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEE 474



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 121/256 (47%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L+  M   GV+PN   ++ +I+  C          +   M   G   ++VT+ T++N
Sbjct: 45  AISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVN 104

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C   +V +++     +   G      T   + +GL ++     AL    +M+  +   
Sbjct: 105 GLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNL 164

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           + + Y+  +DGLCK+G + EA +LF  +     +  +  Y+CLI GLC   + + A  L 
Sbjct: 165 DVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLL 224

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            ++ R G+MP+V T+N++   F   G + +A  +F  M   G+  N VT+N+++      
Sbjct: 225 ANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCML 284

Query: 244 NETSKVVELLHRMDER 259
           N+    +E+   M  +
Sbjct: 285 NQMKDAMEVFDLMIRK 300



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 94/222 (42%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
            +D A + +  M        V  +N L     K K    +++L   M   G++P V T+N
Sbjct: 6   SVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHN 65

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + + L  ++       +   M    V     T+ T ++GLC  G + +A      L+ +
Sbjct: 66  IVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDM 125

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             E        +I+GLCK+G    A    + +       +V  Y+ ++ G C DG + +A
Sbjct: 126 GYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEA 185

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            DLF  M  KG+ PN  T+N L+ G    +   +   LL  M
Sbjct: 186 LDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANM 227



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/193 (18%), Positives = 79/193 (40%), Gaps = 35/193 (18%)

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K V+ +L+ Y +M++    P V  +N LF  + ++     A+ L   M +  V    ST
Sbjct: 4   VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVST 63

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +N                                    +I+ LC++      + +   + 
Sbjct: 64  HNI-----------------------------------VINCLCRLNHTVFGFSVLGLMF 88

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           ++G+ P++VT+  +++G C +G + +A      ++  G   +  T   ++ G  +   +S
Sbjct: 89  KIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSS 148

Query: 248 KVVELLHRMDERN 260
             +  L +M+E+N
Sbjct: 149 AALSYLKKMEEQN 161


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 138/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 175 LDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 234

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y  MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 235 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKG 294

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A +  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 295 LKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAE 354

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P++ TY ++I+ FC  G + K   L  +M+  G AP+ VT+N LM G
Sbjct: 355 KMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 175 LDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 234

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 235 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKG 294

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A      M  + +  + V +  L+ G  +  ++    
Sbjct: 295 LKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAE 354

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 355 KMLREM 360



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 18/249 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 51  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKMLEHLMK 101

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            +  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 102 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 161

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  + 
Sbjct: 162 YNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEML 221

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +N +  
Sbjct: 222 VKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLK 281

Query: 248 KVVELLHRM 256
           +  +L+  M
Sbjct: 282 QAHDLIDEM 290


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 143/255 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + +L+I  G RP    +++LIDG+CL G++++A  +  +M   G   +VVT NTL+
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK+  +++ L L+ EML K ++PT VTYN +  GL    +   A K+F EM  S  A
Sbjct: 591 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTA 650

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   + GLC+N    EA  LF  L  + C+  I   + +I+ L K+ + E A +L
Sbjct: 651 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDL 710

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PNV TY +MI     +G +++A  +F  ME  G AP+    N ++   ++
Sbjct: 711 FAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ 770

Query: 243 NNETSKVVELLHRMD 257
             +  K    + ++D
Sbjct: 771 KGDIVKAGYYMSKVD 785



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  +   M  +GVRPN   YSTLI  FC  G +  A E F  M   G   N   Y++
Sbjct: 423 MDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHS 482

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G+C   D+ ++    SEM+SKG+ RP +V ++++ H L    +V  A  +F+ + H 
Sbjct: 483 LIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHI 542

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  T+N+ IDG C  G + +A  +   +  +  E  +   + L+ G CK GK++  
Sbjct: 543 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG 602

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+ +    + P  VTYNI++ G    G+   A  +F +M   G A +  T+  L+ G
Sbjct: 603 LILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 662

Query: 240 CIRNNETSKVVELLHRM 256
             RN+ T + + L H++
Sbjct: 663 LCRNDLTDEAITLFHKL 679



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 135/256 (52%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGVR--PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           EA  ++  M + G R  P+   ++T+I GF   GE+ +A  LF  M   G + +V TYN+
Sbjct: 213 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNS 272

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++  +  +M+ KG+ P  VTYN + HG       + + K+F +M    
Sbjct: 273 IVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKG 332

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T T+++F+  LCK+G   +A E+F+ +        I +YS L+ G    G+     
Sbjct: 333 LIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMN 392

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF S+   G++ N    NI+I      G MD+A  +F +M+ +GV PN VT++TL+   
Sbjct: 393 NLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAF 452

Query: 241 IRNNETSKVVELLHRM 256
            R    +  +E   +M
Sbjct: 453 CRMGRLADAMEKFSQM 468



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 148/325 (45%), Gaps = 71/325 (21%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E++++   M  +G+ P+   +S+ +   C  G    A E+F  M   G M ++V+Y+ L+
Sbjct: 320 ESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILL 379

Query: 63  NGY-----------------------------------CKTKDVEESLNLYSEMLSKGIR 87
           +GY                                    K   ++E++ +++EM  +G+R
Sbjct: 380 HGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVR 439

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P VVTY+TL      + ++  A++ F +M    +   T+ Y++ I G C +G +V+A E 
Sbjct: 440 PNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEF 499

Query: 148 FRTL------------------------RVLKCE--------LG----IEAYSCLIDGLC 171
              +                        RV+  +        +G    I  ++ LIDG C
Sbjct: 500 ISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYC 559

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
            +GK+E A+ +  ++  VG+ P+VVT N ++ G+C  G++D    LF +M  K V P  V
Sbjct: 560 LVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV 619

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T+N ++ G +R   TS   ++ H M
Sbjct: 620 TYNIVLDGLLRAGRTSAAKKMFHEM 644



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 2/233 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTYNTLING 64
           LL  M +    P+A  Y+T+I   C       A ++   M   G  C  +VV++NT+I+G
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           + K  +V ++ NL++EM+ KG+ P V TYN++   L +   ++ A  +  +M    V  +
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             TYN  I G   +G+  E+A++FR +           +S  +  LCK G+ + A E+FQ
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +   G MP++V+Y+I++HG+  +G+    ++LF  M  KG+  NC   N L+
Sbjct: 362 YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 124/253 (49%), Gaps = 3/253 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFV-SMDINGCMHNVVTYNTLINGYCKTK 69
           +++ G++      +T +   C     D A ++ +  M    C+ + ++YNT+I   C   
Sbjct: 150 LLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDS 209

Query: 70  DVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             +E+L++   M  +G R  P VV++NT+ HG F+  +V  A  LF+EM    V  +  T
Sbjct: 210 RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGT 269

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN+ +D LCK   + +A  + R +     E     Y+ +I G    G  + + ++F+ + 
Sbjct: 270 YNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMT 329

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+P+ VT++  +   C  G+   A ++F  M  KG  P+ V+++ L+ G       +
Sbjct: 330 SKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFA 389

Query: 248 KVVELLHRMDERN 260
            +  L H M ++ 
Sbjct: 390 DMNNLFHSMADKG 402



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 36/273 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + M+Q+GV P+   Y++++D  C    +D+A  +   M   G   + VTYN 
Sbjct: 248 VSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNA 307

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI---------------------------------- 86
           +I+GY  +   +ES  ++ +M SKG+                                  
Sbjct: 308 IIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKG 367

Query: 87  -RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P +V+Y+ L HG     +      LF  M    + +     N  I    K G + EA 
Sbjct: 368 HMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAM 427

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +F  ++       +  YS LI   C++G+L  A E F  +  +G+ PN   Y+ +IHGF
Sbjct: 428 LVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGF 487

Query: 206 CNDGQMDKAHDLFLDMEAKGV-APNCVTFNTLM 237
           C  G + KA +   +M +KG+  PN V F++++
Sbjct: 488 CMHGDLVKAKEFISEMMSKGLHRPNIVFFSSII 520



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 97/214 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  +LD M+  G+ P+    +TL+ G+C +G+ID    LF  M         VTYN 
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G  +      +  ++ EM+  G    + TY  L  GL      + A+ LF ++   D
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 683

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +  NT I+ L K     EA +LF  +        +  Y  +I  L K G +E A 
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEAD 743

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            +F S+ + G  P+    N +I      G + KA
Sbjct: 744 TMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 3/210 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK-L 112
            V TY  L++  C+ +  +      + +L  G++   +   T    L    + + A+  L
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL 182

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL--KCELGIEAYSCLIDGL 170
              M       +  +YNT I  LC +    EA ++ + +     +C   + +++ +I G 
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K G++  A  LF  + + G++P+V TYN ++   C    MDKA  +   M  KGV P+ 
Sbjct: 243 FKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDG 302

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           VT+N ++ G   +    +  ++  +M  + 
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMFRKMTSKG 332



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 72/204 (35%), Gaps = 50/204 (24%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGL--------CKNGYIVEAAELFRTLR----VL 154
           + A  LFDE+          + N F+  L        C NG  +  A   R  R      
Sbjct: 59  DDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPR 118

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL----------------------- 191
              L +  Y  L+D  C+  + +        L R GL                       
Sbjct: 119 VAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA 178

Query: 192 -------------MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFNTL 236
                        +P+ ++YN +I   C D +  +A D+   M  +G   +P+ V+FNT+
Sbjct: 179 VDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 238

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  +  E SK   L + M ++ 
Sbjct: 239 IHGFFKQGEVSKACNLFNEMVQKG 262



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 58/138 (42%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   +     + +  + +T+I+        + A +LF ++  +G + NV TY  +
Sbjct: 670 DEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVM 729

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    K   VEE+  ++S M   G  P+    N +   L +   +  A     ++  + +
Sbjct: 730 IRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTII 789

Query: 122 AAETSTYNTFIDGLCKNG 139
           + E ST +  +      G
Sbjct: 790 SLEASTTSLLMSLFSSKG 807


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 145/260 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EAS  L  +  RG++P+A  +   I G+  TG++  A + F  M  +G M N   Y  
Sbjct: 236 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+ K  ++ E+L+++  + + G+ P V T +   HGL +  +V+ ALK+F E++   
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I G CK G + +A EL   + +      I  Y+ L+DGLCK G ++ A 
Sbjct: 356 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +P  GL P+ VTY+ MI G+C    + +A  LF +M +KGV P+   +N L+ GC
Sbjct: 416 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 475

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  +  K + L   M ++ 
Sbjct: 476 CKEGDMEKAMNLFREMLQKG 495



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 140/256 (54%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA++  D M+  G+ PN  +Y+ LI+G    G +  A  +F  +   G + +V T + 
Sbjct: 271 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 330

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G  K   V+E+L ++SE+  KG+ P V TY++L  G  +  +VE A +L DEM    
Sbjct: 331 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 390

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A     YN  +DGLCK+G I  A +LF  +     E     YS +IDG CK   +  A+
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 450

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +P  G+ P+   YN ++HG C +G M+KA +LF +M  KG A   ++FNTL+ G 
Sbjct: 451 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGY 509

Query: 241 IRNNETSKVVELLHRM 256
            ++ +  +  +L   M
Sbjct: 510 CKSCKIQEASQLFQEM 525



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 150/275 (54%), Gaps = 18/275 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L D M  +G+ PN F+Y+ L+DG C +G+I RAR+LF  M   G   + VTY+T
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK+++V E+ +L+ EM SKG++P    YN L HG  +   +E A+ LF EM    
Sbjct: 436 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE--- 177
            A  T ++NT IDG CK+  I EA++LF+ +   +       Y+ +ID  CK GK+E   
Sbjct: 496 FAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 554

Query: 178 --------------TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
                         T + LF+ +   G+ P+ VTY ++I+  C +  + +A  L  ++  
Sbjct: 555 LLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 614

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           KG+       + L+    +  + ++  +LL  M E
Sbjct: 615 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 649



 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 137/257 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A++LL+ M   G++PN  VYSTLI G+   G I+ AR L   M  +G   ++  YN +I+
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 228

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K   +EE+     E+  +G++P  VT+     G  +  ++  A K FDEM    +  
Sbjct: 229 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 288

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               Y   I+G  K G ++EA  +FR L  L     ++  S  I GL K G+++ A ++F
Sbjct: 289 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 348

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             L   GL+P+V TY+ +I GFC  G+++KA +L  +M  KG+APN   +N L+ G  ++
Sbjct: 349 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 408

Query: 244 NETSKVVELLHRMDERN 260
            +  +  +L   M E+ 
Sbjct: 409 GDIQRARKLFDGMPEKG 425



 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 145/276 (52%), Gaps = 23/276 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA ++   + ++G+ P+ F YS+LI GFC  GE+++A EL   M + G   N+  YN 
Sbjct: 341 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK+ D++ +  L+  M  KG+ P  VTY+T+  G  +   V  A  LF EM    
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   +  YN  + G CK G + +A  LFR + + K      +++ LIDG CK  K++ A 
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSFNTLIDGYCKSCKIQEAS 519

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME-----------------A 223
           +LFQ +    +MP+ VTY  +I   C  G+M++A+ LF +M+                 A
Sbjct: 520 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVA 579

Query: 224 KGVAPNCVTFNTLMLG-CIRNNETSKVVELLHRMDE 258
           KGV P+ VT+  ++   C  +N    +VE     DE
Sbjct: 580 KGVKPDEVTYGLVIYAHCKEDN----LVEAFKLRDE 611



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RLLD M   GV P+ F Y+ +I      G+++ A    + +   G   + VT+  
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I GY KT  + E+   + EML  G+ P    Y  L +G F+   +  AL +F  +    
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T + FI GL KNG + EA ++F  L+       +  YS LI G CK G++E A+
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G+ PN+  YN ++ G C  G + +A  LF  M  KG+ P+ VT++T++ G 
Sbjct: 381 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 440

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++   ++   L H M  + 
Sbjct: 441 CKSENVAEAFSLFHEMPSKG 460



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 9/261 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID---RARELFVSMDINGCMHNVVT 57
           M+EA    + M + G++P+    S LIDGF   G+ID   R +++ VS    G   N++T
Sbjct: 26  MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC---GIPINLIT 82

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN LI+G CK   +E++  +   M++ G +P   T+  L  G    H +  AL+L DEM+
Sbjct: 83  YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 142

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             ++     +Y   I+GLC    +  A +L   +     +  +  YS LI G    G++E
Sbjct: 143 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 202

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  L   +   G+ P++  YN +I      G+M++A    L+++ +G+ P+ VTF   +
Sbjct: 203 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 262

Query: 238 LGCIRNNETSKVVELLHRMDE 258
           LG    ++T K+ E     DE
Sbjct: 263 LG---YSKTGKMTEAAKYFDE 280



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 115/239 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  R+ D+M+  G+  N   Y+ LI G C  G++++A E+   M   GC  N  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC+  ++  +L L  EM  + + P+ V+Y  + +GL     +  A KL ++M  S 
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y+T I G    G I EA  L   +        I  Y+ +I  L K GK+E A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                +   GL P+ VT+   I G+   G+M +A   F +M   G+ PN   +  L+ G
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 20/272 (7%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M  +GV+P++FVY+ L+ G C  G++++A  LF  M   G     +++NTLI
Sbjct: 448 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLI 506

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK+  ++E+  L+ EM++K I P  VTY T+     +  ++E A  LF EMQ  ++ 
Sbjct: 507 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 566

Query: 123 AETS-----------------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-YS 164
            +T                  TY   I   CK   +VEA +L R   V K  L     + 
Sbjct: 567 VDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL-RDEVVGKGMLTKGTIHD 625

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LI  LCK   L  A +L   +  +GL P++   + ++  F   G+MD+A  +F  +++ 
Sbjct: 626 LLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSL 685

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G+ P+  T   L+ G + + ++     L+ ++
Sbjct: 686 GLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 114/227 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++G+ PN + Y+ +  G C    ++ A+  F  M   G   +    + LI+G+ +  D
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E L +   M+S GI   ++TYN L HGL +  ++E A ++   M        + T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+G C+   +  A EL   +          +Y  +I+GLC    L  A +L + +   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L PNVV Y+ +I G+ ++G++++A  L   M   GVAP+   +N ++
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 227



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 99/211 (46%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           M   G + N  TY  +  G C+ K + E+   + EM   G++P     + L  G      
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           ++  L++ D M    +     TYN  I GLCK G + +AAE+ + +  L C+     +  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI+G C+   +  A EL   + +  L+P+ V+Y  MI+G C+   +  A+ L   M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + PN V ++TL++G        +   LL  M
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 117/234 (50%), Gaps = 18/234 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  L   M+Q+G       ++TLIDG+C + +I  A +LF  M     M + VTY T
Sbjct: 481 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539

Query: 61  LINGYCKTKDVEES-----------------LNLYSEMLSKGIRPTVVTYNTLFHGLFEI 103
           +I+ +CK   +EE+                   L+ +M++KG++P  VTY  + +   + 
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599

Query: 104 HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
             +  A KL DE+    +  + + ++  I  LCK   + EA++L   +  L  +  + A 
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           S L+    + GK++ A  +F+ +  +GL+P+  T   +++G  ND   + A +L
Sbjct: 660 STLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 713



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 71/145 (48%)

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M    +   T TY     GLC+   + EA   F  ++    +    A S LIDG  + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++    +   +   G+  N++TYN++IHG C  G+M+KA ++   M   G  PN  TF  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 236 LMLGCIRNNETSKVVELLHRMDERN 260
           L+ G  R +   + +ELL  M++RN
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRN 145



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 45/82 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EAS+LLD M + G++P+    STL+  F   G++D A  +F  +   G + +  T   
Sbjct: 637 LTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLID 696

Query: 61  LINGYCKTKDVEESLNLYSEML 82
           L+NG     D E++ NL  +++
Sbjct: 697 LVNGNLNDTDSEDARNLIKQLV 718


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 141/255 (55%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           +RLL  +    V+P+  +Y+T+I   C    +  A +L+  M + G   NV TY TLI+G
Sbjct: 186 ARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHG 245

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +C   +++E+ +L +EM  K I P V T+N L   L +  +++ A+ LF+EM+H ++   
Sbjct: 246 FCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPN 305

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             TY + IDGLCKN ++  A  L + ++    +  + +Y+ L+D LCK G+LE A + FQ
Sbjct: 306 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQ 365

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            L   G   NV TYN+MI+G C  G      DL   ME KG  PN +TF T++   +  +
Sbjct: 366 HLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKD 425

Query: 245 ETSKVVELLHRMDER 259
           E  K  + L  M  R
Sbjct: 426 ENDKAEKFLREMIAR 440



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 117/226 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   MI +G+ PN F Y+TLI GFC+ G +  A  L   M +     +V T+N 
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 276

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K   ++E+++L+ EM  K + P +VTY +L  GL + H +E A+ L  +M+   
Sbjct: 277 LIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 336

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +Y   +D LCK G +  A + F+ L V    L +  Y+ +I+GLCK G      
Sbjct: 337 IQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 396

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +L   +   G MPN +T+  +I       + DKA     +M A+G+
Sbjct: 397 DLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 131/245 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P+    S LI+ FC    I  A  +F ++   G   N +T NTLI G C   +++ +
Sbjct: 91  GITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRA 150

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+ + +++++G +   V+Y TL +GL +  + +   +L  +++   V  +   Y T I  
Sbjct: 151 LHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHC 210

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCKN  + +A +L+  + V      +  Y+ LI G C +G L+ A+ L   +    + P+
Sbjct: 211 LCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPD 270

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T+NI+I     +G++D+A  LF +M+ K + PN VT+ +L+ G  +N+   + + L  
Sbjct: 271 VYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCK 330

Query: 255 RMDER 259
           +M E+
Sbjct: 331 KMKEQ 335



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 115/243 (47%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P  F+++ ++              LF   + NG   ++ T + LIN +C    +  + ++
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           ++ +L +G  P  +T NTL  GL    +++ AL   D++       +  +Y T I+GLCK
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G     A L R L     +  +  Y+ +I  LCK   L  A +L+  +   G+ PNV T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  +IHGFC  G + +A  L  +M+ K + P+  TFN L+    +  +  + + L   M 
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298

Query: 258 ERN 260
            +N
Sbjct: 299 HKN 301


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 149/292 (51%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M ++G +P+   Y+ LI+G C  G +D A +   +M   GC  NV+T+N ++
Sbjct: 261 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIIL 320

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVT------------------------------ 92
              C T    ++  L S+ML KG  P+VVT                              
Sbjct: 321 RSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCV 380

Query: 93  -----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                YN L HG  +  +++ A++  + M       +  TYNT +  LCK+G +  A E+
Sbjct: 381 PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEI 440

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              L    C   +  Y+ +IDGL K+GK E A EL + + R GL P+++TY+ ++ G   
Sbjct: 441 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGR 500

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +G++D+A  +F DME   + P+ VT+N +MLG  +  +TS+ ++ L  M E+
Sbjct: 501 EGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 552



 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 145/258 (56%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  + L+ MI +G  P+    ++LI GFC +G+  +A  +   ++ +G + +V+TYN 
Sbjct: 122 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNV 181

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK+ +++++L +   M    + P VVTYNT+   L +  +++ A+++ D     +
Sbjct: 182 LIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   I+  C +  + +A +L   +R   C+  +  Y+ LI+G+CK G+L+ A 
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 298

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +   ++P  G  PNV+T+NI++   C+ G+   A  L  DM  KG +P+ VTFN L+   
Sbjct: 299 KFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFL 358

Query: 241 IRNNETSKVVELLHRMDE 258
            R     + +++L +M +
Sbjct: 359 CRKRLLGRAIDVLEKMPK 376



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 143/289 (49%), Gaps = 32/289 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-------------- 48
           +A+R+++++   G  P+   Y+ LI G+C +GEID+A E+   M +              
Sbjct: 159 KATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSL 218

Query: 49  ------------------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                               C  +V+TY  LI   C    V +++ L  EM  KG +P V
Sbjct: 219 CDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDV 278

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           VTYN L +G+ +  +++ A+K  + M          T+N  +  +C  G  ++A  L   
Sbjct: 279 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSD 338

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C   +  ++ LI+ LC+   L  A ++ + +P+ G +PN ++YN ++HGFC + +
Sbjct: 339 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKK 398

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           MD+A +    M ++G  P+ VT+NTL+    ++ +    VE+L+++  +
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 133/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +LD  +QR   P+   Y+ LI+  C    + +A +L   M   GC  +VVTYN 
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++E++   + M S G +P V+T+N +   +    +   A +L  +M    
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    T+N  I+ LC+   +  A ++   +    C     +Y+ L+ G C+  K++ A 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E  + +   G  P++VTYN ++   C DG++D A ++   + +KG +P  +T+NT++ G 
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +T   VELL  M  +
Sbjct: 464 TKVGKTEYAVELLEEMRRK 482



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 129/237 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RLL  M+++G  P+   ++ LI+  C    + RA ++   M  +GC+ N ++YN L+
Sbjct: 331 DAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLL 390

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C+ K ++ ++     M+S+G  P +VTYNTL   L +  +V+ A+++ +++     +
Sbjct: 391 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCS 450

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G    A EL   +R    +  I  YS L+ GL + GK++ A ++
Sbjct: 451 PVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKI 510

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F  +  + + P+ VTYN ++ G C   Q  +A D    M  KG  P   T+  L+ G
Sbjct: 511 FHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 113/207 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M + G  PN+  Y+ L+ GFC   ++DRA E    M   GC  ++VTYNT
Sbjct: 364 LGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 423

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK   V+ ++ + +++ SKG  P ++TYNT+  GL ++ + E+A++L +EM+   
Sbjct: 424 LLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKG 483

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T + GL + G + EA ++F  +  L  +     Y+ ++ GLCK  +   A 
Sbjct: 484 LKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI 543

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           +    +   G  P   TY I+I G  +
Sbjct: 544 DFLAYMVEKGCKPTEATYTILIEGIAD 570



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 3/190 (1%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  ++EE L     M+ +G  P V+   +L  G     + + A ++ + +++S    +  
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G CK+G I +A E+   + V      +  Y+ ++  LC  GKL+ A E+    
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERMSVAP---DVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            +    P+V+TY I+I   CND  + +A  L  +M  KG  P+ VT+N L+ G  +    
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294

Query: 247 SKVVELLHRM 256
            + ++ L+ M
Sbjct: 295 DEAIKFLNNM 304



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 47/87 (54%)

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           L + G+LE   +  + +   G +P+V+    +I GFC  G+  KA  +   +E  G  P+
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+N L+ G  ++ E  K +E+L RM
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERM 202


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  ++  M+  GV P+   Y+++I G CL  +++ A ++F  M   G + NVVTY++
Sbjct: 234 ISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSS 293

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CKT+++ +++ +  EM++ G+   VVT++TL  G  +  + E A++LF  M    
Sbjct: 294 LIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHH 353

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T    +DGL K  +  EA  LFR +  +  EL I  Y+ ++DG+C  GK   A 
Sbjct: 354 QLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDAR 413

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  LP  G+  +VV Y  MI G C +G +D A DL + ME  G  PN  T+N L+ G 
Sbjct: 414 ELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473

Query: 241 IRNNETSKVVELLHRMDER 259
           ++  + S+  + L  M  +
Sbjct: 474 LQRYDISRSTKYLMLMKGK 492



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 132/255 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A ++ +LMI +G+ PN   YS+LI G+C T  I++A  +   M  NG   +VVT++T
Sbjct: 269 MNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWST 328

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK    E ++ L+  M      P + T   +  GLF+      A+ LF +M+  +
Sbjct: 329 LIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMN 388

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  +DG+C  G   +A ELF  L     ++ + AY+ +I GLCK G L+ A 
Sbjct: 389 LELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAE 448

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G  PN  TYN+++ G      + ++    + M+ KG++ +  T   L+   
Sbjct: 449 DLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLISYF 508

Query: 241 IRNNETSKVVELLHR 255
             N E S +   L +
Sbjct: 509 SANKENSALQVFLQK 523



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 36/290 (12%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + GV P    ++TLI+G C  G +  A     S++  G   N  T+ T+ING C
Sbjct: 64  VLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLC 123

Query: 67  KTKDVEES------------------------------------LNLYSEMLSKGIRPTV 90
           K  D   +                                    LN +S M  KGI+P +
Sbjct: 124 KVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDL 183

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           V YN+L HGL    +   A  L   M    +     T+N  +D  CK G I  A  +   
Sbjct: 184 VAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCF 243

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +  +  E  +  Y+ +I G C + ++  A ++F+ +   GL+PNVVTY+ +IHG+C    
Sbjct: 244 MVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRN 303

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++KA  +  +M   G+  + VT++TL+ G  +       +EL   M E +
Sbjct: 304 INKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHH 353



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 3/190 (1%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   +V T   +IN  C  K      ++   M   G+ PTVVT+ TL +GL     V  A
Sbjct: 37  GVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAA 96

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLI 167
            +  D ++     + + T+ T I+GLCK G    A      +  R    +L I AYS ++
Sbjct: 97  ARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLI-AYSTIM 155

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           D LCK G L  A   F  +   G+ P++V YN +IHG C+ G+ ++A  L  +M  KG+ 
Sbjct: 156 DSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIM 215

Query: 228 PNCVTFNTLM 237
           PN  TFN L+
Sbjct: 216 PNVQTFNVLV 225



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/133 (21%), Positives = 60/133 (45%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           + T    + K  +   A  L +    L  +  +   + +I+ LC +      + +  ++ 
Sbjct: 10  FATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMF 69

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           ++G+ P VVT+  +I+G C +G +  A      +E  G   N  T  T++ G  +  +T+
Sbjct: 70  KIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTA 129

Query: 248 KVVELLHRMDERN 260
             +  L +++ RN
Sbjct: 130 GAISYLEKIEGRN 142


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 136/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 190 LDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 249

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y  MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 250 LIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 309

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 310 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAE 369

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G AP+ VT+N LM G
Sbjct: 370 KMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 130/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +   
Sbjct: 130 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGH 189

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G+ P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 190 LDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 249

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 250 LIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 309

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 310 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAE 369

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 370 KMLREM 375



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 100/203 (49%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           ++  ++ LI  Y +T  + +++  Y       +     T   +   L ++   +     +
Sbjct: 68  DIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 127

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +E+      A    +N  +   CK+G I  A  +F  +        + +Y+ L++G  ++
Sbjct: 128 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 187

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G L+  + L  ++   G++P+V TY+++I+G C + +MD A++LF +M  KG+ PN VTF
Sbjct: 188 GHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 247

Query: 234 NTLMLGCIRNNETSKVVELLHRM 256
            TL+ G  +N      +E+  RM
Sbjct: 248 TTLIDGHCKNGRVDFAMEIYKRM 270


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 139/236 (58%), Gaps = 1/236 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS++L ++I +G  P   +++ +I+GFC   ++D A +L   M   GC+ NV T+  LI 
Sbjct: 168 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 227

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   V E+  L  +M++ G  P VVTY+T+ +GL +  QV+ A +LF  M+  +   
Sbjct: 228 GLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 287

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              T+N  IDGLCK   I EA +L+  +R   C   I  Y+ LIDGLCK  +++ A++LF
Sbjct: 288 NVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLF 347

Query: 184 QSLPRVGL-MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           Q++P  G+   N VTY+ + HG+   G+M  A  +F  +  KG +P+  T+ +L+L
Sbjct: 348 QTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 403



 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 142/265 (53%), Gaps = 9/265 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LL++MI++G  PN F ++ LI G C    +  A++L   M   GC  NVVTY+T
Sbjct: 200 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYST 259

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   V+++  L+  M  +   P VVT+N L  GL +  ++E A +L+  M+ + 
Sbjct: 260 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 319

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-----YSCLIDGLCKIGK 175
            A +  TYN+ IDGLCK+  + EA +LF+T+     E G+ A     YS L  G   +G+
Sbjct: 320 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP----ESGVSAANAVTYSTLFHGYAALGR 375

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +  A  +F  L   G  P++ TY  +I  +C   +  +  +L  +M +KG  P   T + 
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 435

Query: 236 LMLGCIRNNETSKVVELLHRMDERN 260
           ++ G    N T + ++L   M  R 
Sbjct: 436 VLGGLFEGNHTERAIQLFDSMAARG 460



 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 136/258 (52%), Gaps = 1/258 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  +L  MI RG  P+   +STLIDG C  G  ++A  +   +   G  ++   + T+
Sbjct: 95  DEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETI 154

Query: 62  INGYC-KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           I   C K   VE +  +   +++KG  PTV+ +N + +G  +   ++ A KL + M    
Sbjct: 155 IQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKG 214

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+   I GLCK   + EA +L   +    C   +  YS +I+GLCK G+++ A+
Sbjct: 215 CVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAY 274

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELFQ + R    PNVVT+NI+I G C   ++++A  L+  M   G AP+ +T+N+L+ G 
Sbjct: 275 ELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGL 334

Query: 241 IRNNETSKVVELLHRMDE 258
            ++ +  +  +L   + E
Sbjct: 335 CKSFQVDEAFQLFQTIPE 352



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 136/260 (52%), Gaps = 2/260 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +LL+ M+  G  PN   YST+I+G C  G++D A ELF  M+   C  NVVT+N LI
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 296

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV- 121
           +G CK K +EE+  LY  M   G  P ++TYN+L  GL +  QV+ A +LF  +  S V 
Sbjct: 297 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 356

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           AA   TY+T   G    G + +A  +F  L        +  Y+ LI   CK  +     E
Sbjct: 357 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 416

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G  P V T + ++ G       ++A  LF  M A+G   + + +N ++ G  
Sbjct: 417 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 476

Query: 242 RNNETSKVVELLHR-MDERN 260
           R ++ +K + +L + +D+R+
Sbjct: 477 RASKHNKALAVLEQVIDKRD 496



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LL+ M   G   NA V++TL+ G C  G +  A E F +M    C  +V+TY  
Sbjct: 25  LDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTA 83

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK    +E+  +  EM+++G  P  VT++TL  GL +    E A ++ +++    
Sbjct: 84  LVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 143

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC-ELGIEAYSCLIDGLCKIGKLETA 179
           +    + + T I  LC     VE A     + + K     +  ++ +I+G CK   L++A
Sbjct: 144 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 203

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++L + +   G +PNV T+ I+I G C   ++ +A  L   M   G +PN VT++T++ G
Sbjct: 204 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVING 263

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +  +     EL   M+ RN
Sbjct: 264 LCKQGQVDDAYELFQLMERRN 284



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 122/243 (50%), Gaps = 8/243 (3%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN F Y  LI GF   G++D A +L   M  NG   N V + TL+ G C    V E+L  
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +  M +K   P V+TY  L H L +  + + A  +  EM     A +T T++T IDGLCK
Sbjct: 67  FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 138 NGYIVEAAELFRTLR-VLKCELGIE--AYSCLIDGLC-KIGKLETAWELFQSLPRVGLMP 193
            G   +A   FR L  V++  +G    A+  +I  LC K   +E A ++   +   G  P
Sbjct: 126 FGSEEQA---FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            V+ +N++I+GFC    +D A+ L   M  KG  PN  TF  L+ G  + N   +  +LL
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242

Query: 254 HRM 256
            +M
Sbjct: 243 EKM 245



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 39/297 (13%)

Query: 1   MDEASRLLDLMIQRGVRP-NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA +L   + + GV   NA  YSTL  G+   G +  A  +F  +   G   ++ TY 
Sbjct: 340 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYT 399

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--- 116
           +LI  YCKT    E + L  EM SKG  P V T + +  GLFE +  E A++LFD M   
Sbjct: 400 SLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 459

Query: 117 --------------------QHSDVAA---------------ETSTYNTFIDGLCKNGYI 141
                               +H+   A                +S  +  ++ LC+ G  
Sbjct: 460 GCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRT 519

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            +A +L   +        + +Y+ L+ GL ++ + + A ++F+++   G  P + T N++
Sbjct: 520 DDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVV 579

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           I   C+  ++D A++L   M   G  P+  T NTL+ G  ++       +LL  M E
Sbjct: 580 ISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTE 636



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 3/229 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  +G  P     S ++ G       +RA +LF SM   GC  + + YN ++ G  +   
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 480

Query: 71  VEESLNLYSEMLSKGIR---PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             ++L +  +++ K  R   P+    + L   L ++ + + A +L  +M     AA  S+
Sbjct: 481 HNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSS 540

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN  + GL +     EA ++F  +        I   + +I  LC   K++ A+EL Q + 
Sbjct: 541 YNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 600

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           ++G  P++ T N +I G+C  G+ D A  L  +M   G+ PN  T + L
Sbjct: 601 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 3/203 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---ELFVSMDINGCMHNVVTY 58
           + A +L D M  RG   +A +Y+ +++G     + ++A    E  +         +    
Sbjct: 447 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAV 506

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           + L+   C+    +++  L  +M  +G    V +YN L  GL  + + + A ++F+ M  
Sbjct: 507 DALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVS 566

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           +  A E ST N  I  LC    + +A EL + +  L C   IE  + LI G CK G+ + 
Sbjct: 567 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADL 626

Query: 179 AWELFQSLPRVGLMPNVVTYNIM 201
           A +L + +   GL PN  T++++
Sbjct: 627 ARKLLEEMTEAGLEPNDTTHDLL 649


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 141/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M+  G  P+   Y+++IDG+C  G +  A  +       G   +  TY +LI
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLI 337

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK  D + ++ ++ + L KG+RP++V YNTL  GL +   +  AL+L +EM  +   
Sbjct: 338 NGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCL 397

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I+GLCK G + +A+ L        C   I  Y+ LIDG CK  KL++A E+
Sbjct: 398 PNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEM 457

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ P+V+TYN +++G C  G+ ++  ++F  ME KG  PN +T+N ++    +
Sbjct: 458 VNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCK 517

Query: 243 NNETSKVVELLHRMDER 259
             + ++ V+LL  M  +
Sbjct: 518 AKKVNEAVDLLGEMKSK 534



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+R+L   + +G +P+ F Y +LI+GFC  G+ DRA  +F      G   ++V YNT
Sbjct: 311 VQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNT 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +   +  +L L +EM   G  P + TYN + +GL ++  V  A  L D+     
Sbjct: 371 LIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYNT IDG CK   +  A E+   +        +  Y+ L++GLCK GK E   
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F+++   G  PN++TYNI++   C   ++++A DL  +M++KG+ P+ V+F TL  G 
Sbjct: 491 EIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +     +L  RM+++
Sbjct: 551 CKIGDIDGAYQLFRRMEKQ 569



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 1/237 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  +    + +G+RP+  +Y+TLI G    G I  A +L   M  NGC+ N+ TYN +
Sbjct: 347 DRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLV 406

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING CK   V ++ +L  + ++KG  P + TYNTL  G  +  +++ A ++ + M    +
Sbjct: 407 INGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGM 466

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYNT ++GLCK G   E  E+F+ +    C   I  Y+ ++D LCK  K+  A +
Sbjct: 467 TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVD 526

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLM 237
           L   +   GL P+VV++  +  GFC  G +D A+ LF  ME +  V     T+N ++
Sbjct: 527 LLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIV 583



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 130/237 (54%), Gaps = 3/237 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ +++ M  +G+ P+   Y+TL++G C  G+ +   E+F +M+  GC  N++TYN 
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNI 510

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
           +++  CK K V E+++L  EM SKG++P VV++ TLF G  +I  ++ A +LF  M+   
Sbjct: 511 IVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           DV   T+TYN  +    +   +  A +LF  ++   C+     Y  +IDG CK+G +   
Sbjct: 571 DVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQG 630

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           ++          +P++ T+  +++  C   ++ +A  +   M  KG+ P   T NT+
Sbjct: 631 YKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE--TVNTI 685



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +AS L+D  I +G  P+ F Y+TLIDG+C   ++D A E+   M   G   +V+TYNT
Sbjct: 416 VSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNT 475

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK    EE + ++  M  KG  P ++TYN +   L +  +V  A+ L  EM+   
Sbjct: 476 LLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKG 535

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  +  ++ T   G CK G I  A +LFR + +          Y+ ++    +   +  A
Sbjct: 536 LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMA 595

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LF  +   G  P+  TY ++I GFC  G + + +   L+   K   P+  TF  ++  
Sbjct: 596 MKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNC 655

Query: 240 CIRNNETSKVVELLHRMDER 259
               ++  + V ++H M ++
Sbjct: 656 LCVKDKVHEAVGIIHLMLQK 675



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 9/266 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A ++   M  RGV+ + + Y+  I  FC T     A  L  +M   GC  N V Y T+
Sbjct: 128 NQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTV 187

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G   + + + +  L+ EML++ + P VV +N L H L +   V  + +L  ++    V
Sbjct: 188 VAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGV 247

Query: 122 AAETSTYNTFIDGLCKNG---------YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
                T+N F+ GLC+ G          +VEA E  R +     E     Y+ +IDG CK
Sbjct: 248 CPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCK 307

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            G ++ A  + +     G  P+  TY  +I+GFC DG  D+A  +F D   KG+ P+ V 
Sbjct: 308 KGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVL 367

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDE 258
           +NTL+ G  +       ++L++ M E
Sbjct: 368 YNTLIKGLSQQGLILPALQLMNEMAE 393



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 14/256 (5%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV---TYNTLINGYCKTK 69
           + G +  A  Y  ++      GE +   +L   M  N  ++N +    Y   +  Y +  
Sbjct: 33  EDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN--VNNALLEGAYIEAMKNYGRKG 90

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            V+E+++ +  M      P+V ++N + + L E      A K++  M+   V ++  TY 
Sbjct: 91  KVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYT 150

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I   CK      A  L R +  L C+    AY  ++ GL   G+ + A ELF  +   
Sbjct: 151 IRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLAR 210

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG---------C 240
            L P+VV +N ++H  C  G + ++  L   +  +GV PN  TFN  + G          
Sbjct: 211 CLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRA 270

Query: 241 IRNNETSKVVELLHRM 256
           +RN+   +  E L +M
Sbjct: 271 VRNSRVVEAEEYLRKM 286



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 2/192 (1%)

Query: 70  DVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETST 127
           D  ++L +++   S+ G + T  TY  +   L    + E   KL  EM+ + + A     
Sbjct: 19  DPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGA 78

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y   +    + G + EA + F  +    C+  + +++ +++ L + G    A +++  + 
Sbjct: 79  YIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMR 138

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G+  +V TY I I  FC   +   A  L  +M   G   N V + T++ G   + E  
Sbjct: 139 DRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHD 198

Query: 248 KVVELLHRMDER 259
              EL   M  R
Sbjct: 199 HARELFDEMLAR 210



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A +L  +M   G  P+ + Y  +IDGFC  G I +  +  +       + ++ T+  
Sbjct: 592 MNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGR 651

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG 99
           ++N  C    V E++ +   ML KGI P  V  NT+F  
Sbjct: 652 VLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEA 688


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 147/260 (56%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  R+LD M+++G+ P+   Y+ LIDG+C  G ++ A+E+   M  N C  N  TYN 
Sbjct: 125 LEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNE 184

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+ K+V  ++ L S+ML   + P+VVTYN+L HG  +I  ++ A +L + M  + 
Sbjct: 185 LICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENG 244

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           V  +  TY+ FID LCK G I EA  LF +L+    E GI+A    Y+ LIDG CK GK+
Sbjct: 245 VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK----EKGIKANEVIYTALIDGYCKAGKM 300

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A  L   +     +PN  TYN +I G C + ++ +A  L   M  KG+     T+  L
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 237 MLGCIRNNETSKVVELLHRM 256
           ++  ++  +      +L +M
Sbjct: 361 IVAMLKEGDFDYAHRILDQM 380



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 116/237 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  + ++M ++G R N   Y+ LI G C  G +D    +F  M  + C   V TY  
Sbjct: 20  VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++   ++    E++NL+SEM  +G  P + TY  + + + +  ++E   ++ DEM    
Sbjct: 80  IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  IDG CK G +  A E+   +    C      Y+ LI G C+   +  A 
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L   +    L P+VVTYN +IHG C  G +D A+ L   M   GV P+  T++  +
Sbjct: 200 ALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 116/232 (50%), Gaps = 4/232 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M++  + P+   Y++LI G C  G +D A  L   M+ NG + +  TY+  I+
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK   +EE+  L++ +  KGI+   V Y  L  G  +  +++ A  L D M   D   
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            +STYN  IDGLCK   + EA  L  ++  + LKC   +  Y+ LI  + K G  + A  
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCT--VPTYTILIVAMLKEGDFDYAHR 375

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           +   +   G  P+V  Y   IH FC  G + +A D+   M  +GV P+ +T+
Sbjct: 376 ILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTY 427



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 61  LINGYCK---------TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           ++NGYCK           DV  + ++++ M  KG R   V+Y  L HGL E+ +V+  + 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           +F +M+  D      TY   +  L ++G  +EA  LF  +R   CE  I  Y+ +I+ +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K  KLE    +   +   GL+P+V TYN +I G+C +G ++ A ++   M +    PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDE 258
           T+N L+ G  R     + + LL +M E
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLE 207



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 9/242 (3%)

Query: 26  LIDGFC---------LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +++G+C         L  +++ A  +F  M   GC  N V+Y  LI+G C+   V+E +N
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           ++ +M      PTV TY  + H LFE  +   A+ LF EM+         TY   I+ +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K   + E   +   +        +  Y+ LIDG CK G +E A E+   +      PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TYN +I GFC    + +A  L   M    + P+ VT+N+L+ G  +         LL+ M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 257 DE 258
           +E
Sbjct: 241 NE 242



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 119/287 (41%), Gaps = 29/287 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A+ LLD M+     PN+  Y+ LIDG C   ++  A  L  SM   G    V TY  
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI    K  D + +  +  +M+S G +P V  Y    H       ++ A  +   M    
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID------------ 168
           V  +  TY   ID     G +  A ++ + +    C+     YSCLI             
Sbjct: 420 VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYK 479

Query: 169 --GLC---------------KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
              LC               K+ K ETA ELF+ +   G  PN+ TY  +I G C  G++
Sbjct: 480 NVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRL 539

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             A  LF  M  +GV+P+   +N+L+  C         V L+  M E
Sbjct: 540 GVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 14/254 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A R+LD M+  G +P+ ++Y+  I  FC  G I  A ++   M   G M + +TY  +
Sbjct: 371 DYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLV 430

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ Y     +  + ++   M   G  P+  TY+ L         ++H LK     ++ +V
Sbjct: 431 IDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCL---------IKHLLKEELTKKYKNV 481

Query: 122 AAETSTYNTF---IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           A   S  N F   +  + K      A ELF  +    C   I  Y+ LI GLCK+G+L  
Sbjct: 482 ALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGV 541

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +LF  +   G+ P+   YN +++  C  G    A  L   M   G  P   + N L  
Sbjct: 542 AQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFC 601

Query: 239 GCIR--NNETSKVV 250
           G     + E +KVV
Sbjct: 602 GLYEEGSKEKAKVV 615



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L + M++ G  PN   Y+ LI G C  G +  A++LF  M+  G   +   YN+L
Sbjct: 505 ETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSL 564

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +N  C+     +++ L   M+  G  P + + N LF GL+E    E A  +F  +     
Sbjct: 565 LNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGY 624

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
             +   +   IDGL KNG     +EL   +    C++  + Y  LI+GL
Sbjct: 625 NDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 6/190 (3%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN F ++ + D + +  + + A ELF  M  +GC  N+ TY  LI G CK   +  +  L
Sbjct: 488 PNVF-FADVADVWKMM-KFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKL 545

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +  M  +G+ P+   YN+L +   E+     A++L   M          + N    GL +
Sbjct: 546 FDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYE 605

Query: 138 NGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            G   +A  +F  L  L+C    +  A+  LIDGL K G  +   EL   +   G   + 
Sbjct: 606 EGSKEKAKVVFSNL--LQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHP 663

Query: 196 VTYNIMIHGF 205
            TY ++I G 
Sbjct: 664 QTYRMLIEGL 673



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 131 FIDGLCKNGYIVEAA---------ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            ++G CK G +VEA           +F  +    C     +Y+ LI GLC++G+++    
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+ +      P V TY +++H     G+  +A +LF +M  +G  PN  T+  ++    
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  +   +L  M E+
Sbjct: 121 KETKLEEGRRILDEMVEK 138


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 146/258 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA    D++I  GV+P+   Y+TLIDG+C  G++D + +    M   G   +  TYN+L+
Sbjct: 498 EAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGY K   VE++L LY EM  K ++   +T N + HGLF+  ++  A +L+ +M      
Sbjct: 558 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQ 617

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT + GLC+N  + EA  +F  LR  + EL +  +S +I+ L K+G+++ A  L
Sbjct: 618 LRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSL 677

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G +P+V+TY++MI     +G ++++ +LFL ME  G A +    N ++   + 
Sbjct: 678 FSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLE 737

Query: 243 NNETSKVVELLHRMDERN 260
             +  +    L ++DE+N
Sbjct: 738 KGDVRRAGTYLTKIDEKN 755



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 3/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING---CMHNVVTYNTLINGYCK 67
           M + G  P+ F Y+ LI G C+  +   A EL + M  +G   C  NVV+YNT+I+G+ K
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             +V+++  L+ EM+ +G+ P VVTYN+L  GL +   ++ A+ +   M    V  +T T
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN  I G C  G + EA  L + +     +  +  YS LI   CKIG+   A  +F S+ 
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           R G  PN   Y+I++HG+   G +    DL   M   G+      FN L+    ++    
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 392

Query: 248 KVVELLHRMDE 258
           K +     M +
Sbjct: 393 KAMTAFTEMRQ 403



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 142/253 (56%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LLDLMI+ G+      ++ LI  +   G +D+A   F  M  NG   +VV+Y+T+I+  C
Sbjct: 362 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 421

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           KT  VE+++  +++M+S+G+ P ++++ +L HGL  I + +   +L  EM +  +  +  
Sbjct: 422 KTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 481

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
             NT +D LCK G +VEA + F  +  +  +  + +Y+ LIDG C +GK++ + +    +
Sbjct: 482 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRM 541

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL P+  TYN +++G+  +G+++ A  L+ +M  K V    +T N ++ G  +    
Sbjct: 542 VSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRI 601

Query: 247 SKVVELLHRMDER 259
               EL  +M +R
Sbjct: 602 VAARELYMKMVDR 614



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+ +G+ P+   Y++LIDG C    +D+A  +   M   G M +  TYN 
Sbjct: 216 VDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNI 275

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYC    +EE++ L  +M   G++P VVTY+ L     +I +   A  +FD M    
Sbjct: 276 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               ++ Y+  + G    G +++  +L   +          A++ LI    K G ++ A 
Sbjct: 336 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 395

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  + + GL P+VV+Y+ +IH  C  G+++ A   F  M ++G++PN ++F +L+ G 
Sbjct: 396 TAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 455

Query: 241 IRNNETSKVVELLHRMDER 259
               E  KV EL   M  R
Sbjct: 456 CSIGEWKKVEELAFEMINR 474



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L  M  +GV P+   Y+ +I G+C  G+++ A  L   M  +G   +VVTY+ 
Sbjct: 251 MDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSL 310

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------LFEIHQ--------- 105
           LI  YCK     E+ +++  M+ KG +P    Y+ L HG      L ++           
Sbjct: 311 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 370

Query: 106 --------------------VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                               V+ A+  F EM+ + +  +  +Y+T I  LCK G + +A 
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
             F  +        I +++ LI GLC IG+ +   EL   +   G+ P+ +  N ++   
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C +G++ +A D F  +   GV P+ V++NTL+ G     +  + ++ L RM
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRM 541



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 4/238 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M++ GV   A +   LI  FC  G +D A   F      G     VT N LI 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 64  GYCKTKDVEESLNL-YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS--- 119
           G C     ++++++ +  M   G  P V +YN L  GL    + + AL+L   M      
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           + +    +YNT IDG  K G + +A  LF  +        +  Y+ LIDGLCK   ++ A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             + Q +   G+MP+  TYNIMI G+C+ GQ+++A  L   M   G+ P+ VT++ L+
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 46/231 (19%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI-------HQVEHALKLFDEMQHSDV--- 121
           E++LNL+ E+L +    +V  +N++   +          H    A+ LF+ M  S V   
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90

Query: 122 --------------------------------AAETSTYNTFIDGLCKNGYIVEAAEL-F 148
                                             +  T N  I GLC      +A ++ F
Sbjct: 91  AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVF 150

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG---LMPNVVTYNIMIHGF 205
           R +  L     + +Y+ LI GLC   K + A EL   +   G     PNVV+YN +I GF
Sbjct: 151 RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGF 210

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +G++DKA+ LF +M  +G+ P+ VT+N+L+ G  +     K V +L  M
Sbjct: 211 FKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM 261



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 35/214 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDG-----------------------FCL----- 32
           MDE+ + LD M+  G+RP+++ Y++L++G                       FC      
Sbjct: 531 MDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNI 590

Query: 33  -------TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                   G I  AREL++ M   G    + TYNT++ G C+   V+E+L ++ ++ SK 
Sbjct: 591 MLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKE 650

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
               V T++ + + L ++ +++ A  LF  M       +  TY+  I    + G + E+ 
Sbjct: 651 FELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESD 710

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            LF ++    C       + ++  L + G +  A
Sbjct: 711 NLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 64/143 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+ + +  +    +   +S +I+     G ID A+ LF +M + G + +V+TY+ 
Sbjct: 636 VDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSL 695

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I  + +   +EES NL+  M   G        N +   L E   V  A     ++   +
Sbjct: 696 MIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKN 755

Query: 121 VAAETSTYNTFIDGLCKNGYIVE 143
            + E ST    I  + +  Y  E
Sbjct: 756 FSLEASTAALLIPIVSEKKYQKE 778


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 134/245 (54%), Gaps = 1/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  +L  M+   + PN   ++TLIDGFC    +  A+  F  M   G   N+VTYN+
Sbjct: 254 MYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNS 313

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING      ++E++ L+ +M+  G++P +VT+N L +G  +   ++ A KLFD++   D
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD 373

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+NT ID  CK G + E   L  ++        +  Y+CLI GLC+   +  A 
Sbjct: 374 LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAK 433

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
           +L   +    L  +VVTYNI+I G+C DG+  KA  L  +M   GV PN VT+NTLM G 
Sbjct: 434 KLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGY 493

Query: 240 CIRNN 244
           C+  N
Sbjct: 494 CMEGN 498



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 136/238 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L D M+  G++PN   ++ LI+GFC    I  AR+LF  +     + N +T+NT
Sbjct: 324 LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK   +EE   L++ ML +GI P V TYN L  GL     V  A KL +EM++ +
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TYN  I G CK+G   +A +L   +  +  +     Y+ L+DG C  G L+ A 
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           ++   + + G   NVVTYN++I GFC  G+++ A+ L  +M  KG+ PN  T++ + L
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRL 561



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 133/250 (53%), Gaps = 3/250 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+R ++PN   ++  I+G C  G++++A ++   +   G   N+VTYNTLI+G+CK   
Sbjct: 191 MIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGS 250

Query: 71  VEESLN---LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             +      +  EML+  I P  +T+NTL  G  +   V  A   F+EMQ   +     T
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN+ I+GL  NG + EA  L+  +  L  +  I  ++ LI+G CK   ++ A +LF  + 
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
              L+PN +T+N MI  FC  G M++   L   M  +G+ PN  T+N L+ G  RN    
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVR 430

Query: 248 KVVELLHRMD 257
              +LL+ M+
Sbjct: 431 AAKKLLNEME 440



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 140/259 (54%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCL---TGEIDRARELFVSMDINGCMHNVVT 57
           +++A  +++ +   G  PN   Y+TLIDG C     G++ RA  +   M  N    N +T
Sbjct: 216 LNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEIT 275

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +NTLI+G+CK ++V  + N + EM  +G++P +VTYN+L +GL    +++ A+ L+D+M 
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV 335

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +     T+N  I+G CK   I EA +LF  +           ++ +ID  CK G +E
Sbjct: 336 GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME 395

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             + L  S+   G+ PNV TYN +I G C +  +  A  L  +ME   +  + VT+N L+
Sbjct: 396 EGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILI 455

Query: 238 LGCIRNNETSKVVELLHRM 256
            G  ++ E SK  +LL  M
Sbjct: 456 GGWCKDGEPSKAEKLLGEM 474



 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 134/256 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    + M ++G++PN   Y++LI+G    G++D A  L+  M   G   N+VT+N LIN
Sbjct: 292 AKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALIN 351

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K ++E+  L+ ++  + + P  +T+NT+     +   +E    L + M    +  
Sbjct: 352 GFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFP 411

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             STYN  I GLC+N  +  A +L   +   + +  +  Y+ LI G CK G+   A +L 
Sbjct: 412 NVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLL 471

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +  VG+ PN VTYN ++ G+C +G +  A  +   ME +G   N VT+N L+ G  + 
Sbjct: 472 GEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKT 531

Query: 244 NETSKVVELLHRMDER 259
            +      LL+ M E+
Sbjct: 532 GKLEDANRLLNEMLEK 547



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 130/254 (51%), Gaps = 11/254 (4%)

Query: 15  GVRP--NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           G RP  NA +   L+  +    EI  A E+F  +   G   ++ + N L++   K  +  
Sbjct: 123 GDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETG 182

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E   +Y EM+ + I+P + T+N   +GL +  ++  A  + ++++    +    TYNT I
Sbjct: 183 EMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLI 242

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIE------AYSCLIDGLCKIGKLETAWELFQSL 186
           DG CK G    A +++R   +LK  L  +       ++ LIDG CK   +  A   F+ +
Sbjct: 243 DGHCKKG---SAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEM 299

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R GL PN+VTYN +I+G  N+G++D+A  L+  M   G+ PN VTFN L+ G  +    
Sbjct: 300 QRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMI 359

Query: 247 SKVVELLHRMDERN 260
            +  +L   + E++
Sbjct: 360 KEARKLFDDIAEQD 373



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 75/138 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL+ M    ++ +   Y+ LI G+C  GE  +A +L   M   G   N VTYNTL++
Sbjct: 432 AKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMD 491

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC   +++ +L + ++M  +G R  VVTYN L  G  +  ++E A +L +EM    +  
Sbjct: 492 GYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNP 551

Query: 124 ETSTYNTFIDGLCKNGYI 141
             +TY+     + + G+I
Sbjct: 552 NRTTYDVVRLEMLEKGFI 569


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 142/254 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + +L+I  G RP+ F +++LIDG+CL G++D+A  +  +M   G   +VVTY+TLIN
Sbjct: 572 AQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLIN 631

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY K+  +++ L L+ EML K ++PT VTY+ +  GLF   +   A K+F EM  S  A 
Sbjct: 632 GYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAM 691

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             STY   + GLC+N    EA  LF  L  +  +  I   + +I  L K+ + E A +LF
Sbjct: 692 SISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLF 751

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            S+   GL+PN  TY +MI     +G +++A  +F  ME  G AP+    N ++   ++ 
Sbjct: 752 ASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQK 811

Query: 244 NETSKVVELLHRMD 257
            E  K    + ++D
Sbjct: 812 GEIVKAGYYMSKVD 825



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 132/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL +    G  P+   Y+ +I G  + GEI +A  LF  M   G + NVVTYN++++  C
Sbjct: 259 LLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALC 318

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K + ++++  +  +M    I+P  VTY  + HG   + + + A K+F EM    +  +  
Sbjct: 319 KARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIV 378

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N+ +D LCK+    EAAE+F ++     +  I +YS L+ G    G+      LF S+
Sbjct: 379 TFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSM 438

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G++ +   +NI+I+     G MD+A  +F +M  +GV+PN VT+ T++    R    
Sbjct: 439 TDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRL 498

Query: 247 SKVVELLHRM 256
           +  +E L +M
Sbjct: 499 ADAMEKLSQM 508



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  +   M  +GV PN   Y+T+I   C  G +  A E    M   G   N V Y++
Sbjct: 463 MDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHS 522

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+C   D+ ++  L SEM+ +GI RP +  ++++ H L    +V +A  +F+ + H 
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHI 582

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+N+ IDG C  G + +A  +   +     E  +  YS LI+G  K G+++  
Sbjct: 583 GDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDG 642

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+ +    + P  VTY++++ G    G+   A  +F +M   G A +  T+  ++ G
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQG 702

Query: 240 CIRNNETSKVVELLHRMDERN 260
             RNN T + + L H++   N
Sbjct: 703 LCRNNCTDEAITLFHKLGAMN 723



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 36/273 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + M+Q+GV PN   Y++++   C    +D+A  +   M  N    + VTY  
Sbjct: 288 ISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTA 347

Query: 61  LINGY-----------------------------------CKTKDVEESLNLYSEMLSKG 85
           +I+GY                                   CK K  +E+  ++  + +KG
Sbjct: 348 MIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKG 407

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +P +++Y+ L HG     +      LF  M  + + A++  +N  I+   K G + EA 
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEAL 467

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +F  +R       +  Y+ +I  LC++G+L  A E    +  +GL PN V Y+ +I GF
Sbjct: 468 LIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGF 527

Query: 206 CNDGQMDKAHDLFLDMEAKGVA-PNCVTFNTLM 237
           C  G + KA +L  +M  +G+  PN   F++++
Sbjct: 528 CTHGDLIKAKELVSEMMDQGIPRPNITFFSSII 560



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 71/327 (21%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+++   M + G+ P+   +++L+D  C       A E+F S+   G   ++++Y+ L+
Sbjct: 360 EAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILL 419

Query: 63  NGY-----------------------------------CKTKDVEESLNLYSEMLSKGIR 87
           +GY                                    K   ++E+L +++EM  +G+ 
Sbjct: 420 HGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVS 479

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P VVTY T+   L  + ++  A++   +M    +   T  Y++ I G C +G +++A EL
Sbjct: 480 PNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKEL 539

Query: 148 FRTL------------------------RVLKCE--------LG----IEAYSCLIDGLC 171
              +                        RV+  +        +G    I  ++ LIDG C
Sbjct: 540 VSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYC 599

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
            +GK++ A+ +  ++   G  P+VVTY+ +I+G+   G++D    LF +M  K V P  V
Sbjct: 600 LVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTV 659

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDE 258
           T++ ++ G  R   TS   ++ H M E
Sbjct: 660 TYSLVLDGLFRAGRTSAAKKMFHEMIE 686



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 2/250 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFV-SMDINGCMHNVVTYNTLINGYCKTK 69
           +++ G+R +  V +T +   C     D A  + +  M   GC+ +  +YNT+I   C   
Sbjct: 191 LLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGS 250

Query: 70  DVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             +E+L++   M    G  P VV+Y  + HGLF   ++  A  LF+EM    V     TY
Sbjct: 251 RSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTY 310

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N+ +  LCK   + +A  + R +     +     Y+ +I G   +G+ + A ++F+ + R
Sbjct: 311 NSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTR 370

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            GL+P++VT+N ++   C   +  +A ++F  +  KG  P+ ++++ L+ G         
Sbjct: 371 EGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVD 430

Query: 249 VVELLHRMDE 258
           +  L H M +
Sbjct: 431 MNNLFHSMTD 440



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 2/240 (0%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y  L+D  C     D     F  +   G   + +  NT +   C  K  +E+L++    +
Sbjct: 168 YGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRM 227

Query: 83  SK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFIDGLCKNGY 140
           S+ G  P   +YNT+   L    + + AL +   M   D  + +  +Y   I GL   G 
Sbjct: 228 SELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGE 287

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           I +A  LF  +        +  Y+ ++  LCK   ++ A  + + +    + P+ VTY  
Sbjct: 288 ISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTA 347

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           MIHG+   G+  +A  +F +M  +G+ P+ VTFN+LM    ++  + +  E+ H +  + 
Sbjct: 348 MIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKG 407



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 13/167 (7%)

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV---EAAELFRTL--RVLKCELG 159
             E A  LFDE+   D        N F+  L +    V   +A  L   L  R+ + E G
Sbjct: 98  STEDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAG 157

Query: 160 -------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                  +  Y  L+D  C+  + +     F  L R GL  + +  N  +   C   + D
Sbjct: 158 PRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTD 217

Query: 213 KAHDLFLD-MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +A  + L  M   G  P+  ++NT++      + + + +++L RM +
Sbjct: 218 EALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTK 264



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 57/138 (41%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   +    ++    + +T+I         + A +LF S+  +G + N  TY  +
Sbjct: 710 DEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVM 769

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    K   VEE+  ++S M   G  P+    N +   L +  ++  A     ++  + +
Sbjct: 770 IINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTII 829

Query: 122 AAETSTYNTFIDGLCKNG 139
           + E ST +  I      G
Sbjct: 830 SLEASTTSLLISLFASKG 847


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 141/260 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A+  L  M + G+ P+  +Y+ +I GFC  G +  A  +   M   GC+ +VVTYNT
Sbjct: 315 MDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNT 374

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK + + ++  L +EM  +G+ P + T+ TL HG      +E AL+ FD +    
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT IDG+C+ G + +A EL+  +   +       YS LID  C+ G+++ A+
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAF 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +   G++PN++TYN +I G+C  G + K       M    V P+ +T+NTL+ G 
Sbjct: 495 AFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGY 554

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++  +  +   LL  M+  N
Sbjct: 555 VKEGKMHEAFNLLKIMENEN 574



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 143/260 (55%), Gaps = 2/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L+D M+ +G++P    Y++++ G    G  D+ARE+F +MD  G   +V ++N 
Sbjct: 210 VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNM 269

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHS 119
           LI G+C+  ++EE+L  Y EM  + + P VV+++ L  GLF    +++HA +   EM+  
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI-GLFTRRGEMDHAAEYLREMREF 328

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +   Y   I G C+ G ++EA  +   +    C   +  Y+ L++GLCK  +L  A
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL   +   G+ P++ T+  +IHG+C DG ++KA   F  +  + + P+ VT+NTL+ G
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDG 448

Query: 240 CIRNNETSKVVELLHRMDER 259
             R  +  K  EL   M  R
Sbjct: 449 MCRQGDLGKANELWDDMHSR 468



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R    M  R V P+   +S LI  F   GE+D A E    M   G M + V Y  
Sbjct: 280 LEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTM 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G+C+   + E+L +  EM++ G  P VVTYNTL +GL +  ++  A +L +EM+   
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+ T I G C++G I +A + F T+   +    I  Y+ LIDG+C+ G L  A 
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKAN 459

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +    + PN VTY+I+I   C  GQ+D A     +M  KG+ PN +T+N+++ G 
Sbjct: 460 ELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGY 519

Query: 241 IRNNETSKVVELLHRM 256
            R+   SK  + L +M
Sbjct: 520 CRSGNVSKGQQFLPKM 535



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL+ M +RGV P+   ++TLI G+C  G I++A + F ++       ++VTYNT
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+  D+ ++  L+ +M S+ I P  VTY+ L     E  QV++A    DEM +  
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ I G C++G + +  +    +R  K    +  Y+ LI G  K GK+  A+
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAF 564

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +    + P+ VTYN++I GF   G M +A  ++  M A+G+ P+  T+ +++ G 
Sbjct: 565 NLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGH 624

Query: 241 IRNNETSKVVELLHRM 256
           +    + K  +L   M
Sbjct: 625 VVAGNSKKSFQLHDEM 640



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 128/241 (53%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N +  + ++  +C T +      +   M+      +VVT+N +++   +  DVE ++ L 
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M+SKGI+P +VTYN++  GL    + + A ++F  M    VA +  ++N  I G C+ 
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA   ++ +R  +    + ++SCLI    + G+++ A E  + +   GLMP+ V Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            ++I GFC  G M +A  +  +M A G  P+ VT+NTL+ G  +    S   ELL+ M E
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397

Query: 259 R 259
           R
Sbjct: 398 R 398



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 117/229 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +  D +  + +RP+   Y+TLIDG C  G++ +A EL+  M       N VTY+ 
Sbjct: 420 IEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSI 479

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C+   V+ +     EM++KGI P ++TYN++  G      V    +   +M+H  
Sbjct: 480 LIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYNT I G  K G + EA  L + +     +     Y+ +I G    G ++ A 
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEAD 599

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            +++ +   G+ P+  TY  MI+G    G   K+  L  +M  KG+AP+
Sbjct: 600 WVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 89/185 (48%)

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           + + Y  +LS        T N + H   +  Q      +  EM+   V  +  T+N  +D
Sbjct: 143 TADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVD 202

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
              + G +  A  L  ++     + G+  Y+ ++ GL + G+ + A E+F+++   G+ P
Sbjct: 203 ARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAP 262

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +V ++N++I GFC  G++++A   + +M  + V P+ V+F+ L+    R  E     E L
Sbjct: 263 DVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYL 322

Query: 254 HRMDE 258
             M E
Sbjct: 323 REMRE 327



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 79/183 (43%)

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L++ S +L+    P    ++ L     +  +   A + F  +    V    +  N  +  
Sbjct: 74  LDIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAA 133

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L + G+    A+ +R +     E+     + ++   CK  +      +   + +  + P+
Sbjct: 134 LSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPD 193

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVT+N+M+      G ++ A  L   M +KG+ P  VT+N+++ G +RN    K  E+  
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFR 253

Query: 255 RMD 257
            MD
Sbjct: 254 AMD 256


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 141/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+R+++++   G  P+   Y+ LI G C TG    A +L   M   GC  +VVT+N LI
Sbjct: 137 KATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILI 196

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C+   +  ++++  +M   G  P  ++YN L HG  +  ++E A++   +M      
Sbjct: 197 NFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCY 256

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT +  LCK+G +  A EL   L    C   +  Y+ +IDGL K+GK + A +L
Sbjct: 257 PDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKL 316

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   GL P+++TY+ ++ G   +G++D+A   F D+E  GV PN +T+N +MLG  +
Sbjct: 317 LDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCK 376

Query: 243 NNETSKVVELLHRMDER 259
             +T + ++ L  M +R
Sbjct: 377 ARKTDRAIDFLAYMVQR 393



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 139/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  M++RG  P+   ++ LI+  C  G + RA ++   M  +GC  N ++YN L+
Sbjct: 172 DAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLL 231

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K +E ++    +M S+G  P +VTYNTL   L +  +V+ A++L +++     +
Sbjct: 232 HGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCS 291

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G   +AA+L   +R    +  I  YS L+ GL + GK++ A + 
Sbjct: 292 PVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKF 351

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  L  +G+ PN +TYN ++ G C   + D+A D    M  +G  P   ++  L+ G   
Sbjct: 352 FHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAY 411

Query: 243 NNETSKVVELLHRM 256
                + +ELL+ +
Sbjct: 412 EGLAKEALELLNEL 425



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 123/226 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M + G  PN+  Y+ L+ GFC   +++RA E    M   GC  ++VTYNT
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK   V+ ++ L +++ SKG  P ++TYNT+  GL ++ + + A KL DEM+   
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ + GL + G + EA + F  L VL  +     Y+ ++ GLCK  K + A 
Sbjct: 325 LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAI 384

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +    + + G  P   +Y I+I G   +G   +A +L  ++  +GV
Sbjct: 385 DFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 110/226 (48%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           GE++       SM   G + +++   +LI G+CK     ++  +   +   G  P V+TY
Sbjct: 98  GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           N L  G+    +   A KL  +M     +    T+N  I+ LC+ G +  A ++   +  
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
             C     +Y+ L+ G CK  K+E A E    +   G  P++VTYN ++   C DG++D 
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A +L   + +KG +P  +T+NT++ G  +  +T +  +LL  M  +
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAK 323



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%)

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           +  N  ++   +  ++EE       M+ +G  P ++   +L  G  +I +   A ++ + 
Sbjct: 85  IESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           ++ S    +  TYN  I G+C  G  ++A +L   +    C   +  ++ LI+ LC+ G 
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           L  A ++ + +P+ G  PN ++YN ++HGFC + +M++A +    M ++G  P+ VT+NT
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           L+    ++ +    VELL+++  +
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSK 288



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 72/126 (57%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A++LLD M  +G++P+   YS+L+ G    G++D A + F  +++ G   N +TYN +
Sbjct: 311 DQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAI 370

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G CK +  + +++  + M+ +G +PT  +Y  L  GL      + AL+L +E+    V
Sbjct: 371 MLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430

Query: 122 AAETST 127
             ++S 
Sbjct: 431 VKKSSA 436


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  L++ M  +G  PN   Y+ LID FC  G ++ AR +   M   G   N V YN LI
Sbjct: 32  SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 91

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V+++LN++ +M SKG +P + T+N+L  GL ++++ E AL L+ +M    V 
Sbjct: 92  SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 151

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T TYNT I    + G + EA +L   +    C L    Y+ LI  LC+ G +E    L
Sbjct: 152 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 211

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   GL PN ++ NI+I+G C  G +  A +   DM  +G+ P+ VT+N+L+ G  +
Sbjct: 212 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 271

Query: 243 NNETSKVVELLHRM 256
                + + L  ++
Sbjct: 272 TGRAQEALNLFDKL 285



 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 132/239 (55%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +LD M  +G+  NA  Y+ LI   C   ++  A  +F  M   GC  ++ T+N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK    EE+L LY +ML +G+    +TYNTL H       ++ ALKL ++M    
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
              +  TYN  I  LC+ G I +   LF  +  +   L     SC  LI+GLC+ G ++ 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDM--MSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A E  + +   GL P++VTYN +I+G C  G+  +A +LF  ++ +G+ P+ +T+NTL+
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 124/245 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +   M  +G +P+ F +++LI G C   + + A  L+  M + G + N +TYNT
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 159

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + +   ++E+L L ++ML +G     +TYN L   L     +E  L LF++M    
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     + N  I+GLC+ G I  A E  R +        I  Y+ LI+GLCK G+ + A 
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L   G+ P+ +TYN +I   C +G  D AH L       G  PN VT+  L+   
Sbjct: 280 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 339

Query: 241 IRNNE 245
           I+  +
Sbjct: 340 IKEGD 344



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 107/211 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  L   M+  GV  N   Y+TLI  F   G +  A +L   M   GC  + +TYN L
Sbjct: 136 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 195

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I   C+  ++E+ L L+ +M+SKG+ P  ++ N L +GL     ++HAL+   +M H  +
Sbjct: 196 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 255

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ I+GLCK G   EA  LF  L+V         Y+ LI   CK G  + A  
Sbjct: 256 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 315

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           L       G +PN VT+ I++  F  +G  +
Sbjct: 316 LLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 103/207 (49%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           GC  ++ TYNTLI G CK   +  +  L +EM  KG  P V+TY  L     +  ++E A
Sbjct: 9   GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
             + DEM    +A     YN  I  LCK+  + +A  +F  +    C+  I  ++ LI G
Sbjct: 69  RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 128

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK+ K E A  L+Q +   G++ N +TYN +IH F   G M +A  L  DM  +G   +
Sbjct: 129 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 188

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+N L+    R     K + L   M
Sbjct: 189 DITYNGLIKALCRAGNIEKGLALFEDM 215



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           ++  MLS G  P + TYNTL  GL +   +  A +L +EMQ         TY   ID  C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + EA  +   +      L    Y+CLI  LCK  K++ A  +F  +   G  P++ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+N +I G C   + ++A  L+ DM  +GV  N +T+NTL+   +R     + ++L++ M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 146/261 (55%), Gaps = 6/261 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LLD M +RGV+ +  ++STLI G C  G ID A E F SM    C  NV+TYNT
Sbjct: 127 VDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVITYNT 185

Query: 61  LINGYCKTKDVEESLNLYSEM-----LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           ++NG CK   ++E+L L+ +M      S G  P V++Y+T+   L +  +V+ A + F  
Sbjct: 186 VVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKR 245

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M+    A    TY++ IDGLCK     E  EL   ++     + I  ++ ++  L K  +
Sbjct: 246 MRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 305

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            E A + F+ L + G  PNVVTYN+ +HG C  G++D+A+ + L+M    V P+ +T+++
Sbjct: 306 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS 365

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           ++ G  +     K  ++  RM
Sbjct: 366 IIDGFCKAGRMDKADDVFTRM 386



 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 5/265 (1%)

Query: 1   MDEASRLLDLMIQR-----GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNV 55
           +DEA  L D M +R     G  P+   YST+ID  C    +D+A E F  M   GC  NV
Sbjct: 196 IDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNV 255

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           VTY++LI+G CK     E L L   M  KG    ++ +N + H L++  + E A + F+ 
Sbjct: 256 VTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 315

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           +  S       TYN  + GLCK G + EA  +   +   K    +  YS +IDG CK G+
Sbjct: 316 LLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 375

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A ++F  +     +P+ VT+  ++HGF    +  +A  +  DM   G  P   T+N 
Sbjct: 376 MDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNV 435

Query: 236 LMLGCIRNNETSKVVELLHRMDERN 260
           LM      +     +E+ H+M  + 
Sbjct: 436 LMDCVCGADSVESALEIYHKMKRKK 460



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 6/216 (2%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G  HN  T   L+N + K K  EE+  L  E L     P  + Y T+ +G  +  QV+ A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
            +L DEM+   V  +   ++T I GLC+ G I EA E F+++   +C   +  Y+ +++G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNG 189

Query: 170 LCKIGKLETAWELFQSLPRV-----GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           LCK  +++ A ELF  + +      G  P+V++Y+ +I   C   ++DKA++ F  M A 
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G APN VT+++L+ G  + +  S+ +ELL  M E+ 
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKG 285



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 32/292 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+L  M++  V P+   YS++IDGFC  G +D+A ++F  M ++ C+ + VT+ T
Sbjct: 341 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+ + K   E+  ++ +M++ G  P + TYN L   +     VE AL+++ +M+   
Sbjct: 401 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA- 179
              + +TY   I  LC+   + EA E    +              L++ LCK G+++ A 
Sbjct: 461 RQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 520

Query: 180 ------------------------------WELFQSLPR-VGLMPNVVTYNIMIHGFCND 208
                                         WE    L R  G + +  TY++ +   C  
Sbjct: 521 SVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKA 580

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G+ D+A ++   M  KGV P+  T+  ++      +     +    +M  R 
Sbjct: 581 GKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRG 632



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 119/236 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +  + +++ G +PN   Y+  + G C  G +D A  + + M  +    +V+TY+++
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   ++++ ++++ M+     P  VT+ TL HG  E  +   A ++ ++M ++  
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 426

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  +D +C    +  A E++  ++  K +     Y+ LI  LC+  +++ A E
Sbjct: 427 IPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKE 486

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               +    ++PN    + ++   C  G++D+A  +  ++   G  P   TF  L+
Sbjct: 487 FLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 4/233 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++  +P+   Y+ LI   C    +D A+E    M+ +  + N    + L+   CK  +
Sbjct: 456 MKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGE 515

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E+ ++   ++  G +P   T+  L   L+   + E A KL   ++     A+ +TY+ 
Sbjct: 516 VDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATYSL 572

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +  +CK G   EA E+   + +         Y  ++  LC + ++E+A   F+ +   G
Sbjct: 573 CVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRG 632

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             P +VTY ++I   C+    D+A  +F  M A G  P   T  TL   C+R+
Sbjct: 633 CAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLS-SCLRD 684



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 3/212 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   LD+M    V PN  +   L++  C  GE+D A  +  ++   GC     T+  
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKI 540

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+      K  E +  L   + S G      TY+     + +  + + A+++ ++M    
Sbjct: 541 LVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG 597

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   +  LC    +  A   F  +    C  G+  Y+ LI   C     + A+
Sbjct: 598 VRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAF 657

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
            +F+++   G  P   T   +     + G  D
Sbjct: 658 RIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 689


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 137/239 (57%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M  +G +PN + Y+ L+DGFC  G+ID A  +   M  +G   N V +N LI+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK   + E++ ++ EM  KG +P V T+N+L  GL E+ +++HAL L  +M    V A
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            T TYNT I+   + G I EA +L   +      L    Y+ LI GLC+ G+++ A  LF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           + + R G  P+ ++ NI+I+G C  G +++A +   +M  +G  P+ VTFN+L+ G  R
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 138/239 (57%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ M   G++PN   ++ LI  FC    I  A E+F  M   GC  +V T+N+
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+  +++ +L L  +M+S+G+    VTYNTL +      +++ A KL +EM    
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
              +  TYN+ I GLC+ G + +A  LF   ++L+        SC  LI+GLC+ G +E 
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFE--KMLRDGHAPSNISCNILINGLCRSGMVEE 617

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A E  + +   G  P++VT+N +I+G C  G+++    +F  ++A+G+ P+ VTFNTLM
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 32/288 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M + G  PN+ +Y TLI        ++ A +L   M + GC+ +  T+N 
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF------- 113
           +I G CK   + E+  + + ML +G  P  +TY  L +GL +I +V+ A  LF       
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352

Query: 114 -------------------------DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                                    D +    +  +  TYN+ I G  K G +  A E+ 
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +R   C+  + +Y+ L+DG CK+GK++ A+ +   +   GL PN V +N +I  FC +
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            ++ +A ++F +M  KG  P+  TFN+L+ G    +E    + LL  M
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 32/288 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN----------- 49
           ++EA+++++ M+ RG  P+   Y  L++G C  G +D A++LF  +              
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362

Query: 50  ---------------------GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
                                G + +V TYN+LI GY K   V  +L +  +M +KG +P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            V +Y  L  G  ++ +++ A  + +EM    +   T  +N  I   CK   I EA E+F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           R +    C+  +  ++ LI GLC++ +++ A  L + +   G++ N VTYN +I+ F   
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G++ +A  L  +M  +G   + +T+N+L+ G  R  E  K   L  +M
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 127/241 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M ++G +P+ + +++LI G C   EI  A  L   M   G + N VTYNT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN + +  +++E+  L +EM+ +G     +TYN+L  GL    +V+ A  LF++M    
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A    + N  I+GLC++G + EA E  + + +      I  ++ LI+GLC+ G++E   
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ L   G+ P+ VT+N ++   C  G +  A  L  +    G  PN  T++ L+   
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714

Query: 241 I 241
           I
Sbjct: 715 I 715



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 127/283 (44%), Gaps = 36/283 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ R + P  F +  ++  FC   EID A  L   M  +GC+ N V Y TLI+   K   
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L L  EM   G  P   T+N +  GL +  ++  A K+ + M     A +  TY  
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIE----------------------------- 161
            ++GLCK G +  A +LF   R+ K E+ I                              
Sbjct: 328 LMNGLCKIGRVDAAKDLF--YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385

Query: 162 -----AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
                 Y+ LI G  K G +  A E+   +   G  PNV +Y I++ GFC  G++D+A++
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +  +M A G+ PN V FN L+    + +   + VE+   M  +
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 107/213 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  LL  MI  GV  N   Y+TLI+ F   GEI  AR+L   M   G   + +TYN+
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+  +V+++ +L+ +ML  G  P+ ++ N L +GL     VE A++   EM    
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+N+ I+GLC+ G I +   +FR L+          ++ L+  LCK G +  A 
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
            L       G +PN  T++I++        +D+
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 13/256 (5%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNT---- 60
           RLL  M   G+     ++ +++  +   G   +   L + M ++  C     +YN     
Sbjct: 132 RLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 191

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C     + + N++ +MLS+ I PT+ T+  +      +++++ AL L  +M    
Sbjct: 192 LVSGNCH----KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG 247

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               +  Y T I  L K   + EA +L   + ++ C    E ++ +I GLCK  ++  A 
Sbjct: 248 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 307

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G  P+ +TY  +++G C  G++D A DLF  +      P  V FNTL+ G 
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGF 363

Query: 241 IRNNETSKVVELLHRM 256
           + +        +L  M
Sbjct: 364 VTHGRLDDAKAVLSDM 379


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/253 (36%), Positives = 140/253 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +LD+M   G  PN   Y+ L++G    GE DRA+EL   M + G   +  TYN LI 
Sbjct: 226 AVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIR 285

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK +  EE+ +L  EML +G  PTVVTYNT+ + L  + +V  A +  D M + D+  
Sbjct: 286 GFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMP 345

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  +YNT I G  + G   EA  LF  LR       +  Y+ LIDG C+ G L+ A  + 
Sbjct: 346 DLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMK 405

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + GL P+VVT+ I++ GFC  G +  A +LF +M ++G+ P+C+ + T ++G ++ 
Sbjct: 406 DDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKL 465

Query: 244 NETSKVVELLHRM 256
              SK   +   M
Sbjct: 466 GNPSKAFGMKEEM 478



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 135/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   +  + + P+   Y+TLIDG C TG +D A+ +   M  +G   +VVT+  L+
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C+  ++  +  L+ EMLS+G++P  + Y T   G  ++     A  + +EM+     
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  I+GLCK G   +A EL + +R+         Y+ +I      G L  A E+
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEV 544

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + + G+ P+VVTY ++IH +   G++D A   F +M+ KGV+PN +T+N L+ G  +
Sbjct: 545 FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK 604

Query: 243 NNETSKVVELLHRMDER 259
            N       L   M+ +
Sbjct: 605 ENMMDVAYNLFAEMESK 621



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 127/237 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + D MI+ G+ P+   ++ L+ GFC  G +  A+ELF  M   G   + + Y T
Sbjct: 398 LDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTT 457

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G  K  +  ++  +  EM ++G  P ++TYN L +GL ++   + A +L  +M+   
Sbjct: 458 RIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I     +G + +A E+F  +        +  Y+ LI      G+L+ A 
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAK 577

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + F  +   G+ PNV+TYN +I+G C +  MD A++LF +ME+KGV+PN  T+  L+
Sbjct: 578 KYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 109/234 (46%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D M+ RG++P+   Y+T I G    G   +A  +   M   G   +++TYN LIN
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK  + +++  L  +M  +GI P  VTY ++ H       +  A ++F +M    +  
Sbjct: 496 GLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHP 555

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   I      G +  A + F  ++       +  Y+ LI GLCK   ++ A+ LF
Sbjct: 556 SVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLF 615

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   G+ PN  TY I+I+   N      A  L+ DM  + + P+  T + LM
Sbjct: 616 AEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALM 669



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 12/246 (4%)

Query: 7   LLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHN----VVTYNTL 61
           +LD++ + G ++P  +V    I+     G +D    + V +   GC  N    V   + L
Sbjct: 91  ILDILAKNGFMKPAYWVMEKAIEVKVDGGVLD----VLVGI---GCGRNSEVSVKLLDLL 143

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I  + K   +E+ L ++ +M++ G+ P V   N +   L +   V    +++  M    +
Sbjct: 144 IQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQI 203

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+NT +D  CK G +  A E+   +R+  C+    +Y+ L++GL   G+ + A E
Sbjct: 204 RPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKE 263

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +  +GL  +  TYN +I GFC     ++A+DL  +M  +G  P  VT+NT+M    
Sbjct: 264 LIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLC 323

Query: 242 RNNETS 247
           R    S
Sbjct: 324 RLGRVS 329



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 4/258 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLID----GFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +LD+++  G   N+ V   L+D     F     +++   +F  M  NG + +V   N ++
Sbjct: 120 VLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVL 179

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
                   V E   +YS M+   IRPT+VT+NT+     +  +V  A+++ D M+     
Sbjct: 180 KLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD 239

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               +YN  ++GL   G    A EL   + +L  ++    Y+ LI G CK    E A +L
Sbjct: 240 PNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDL 299

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G +P VVTYN +++  C  G++  A      M  + + P+ V++NTL+ G  R
Sbjct: 300 RREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSR 359

Query: 243 NNETSKVVELLHRMDERN 260
               ++ + L   +  +N
Sbjct: 360 LGNFAEALLLFSELRSKN 377



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 9/157 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +   M+++G+ P+   Y+ LI  + + G +D A++ F  M   G   NV+TYN 
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK   ++ + NL++EM SKG+ P   TY  L +    +   + ALKL+ +M   +
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDRE 657

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +  ++ T++  +  L K+         ++ L VL+ E
Sbjct: 658 IKPDSCTHSALMKHLSKD---------YKLLAVLRLE 685



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 1/186 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A+ L+  M   G+ P+   Y+++I    ++G + +A E+F  M   G   +VVTY  L
Sbjct: 504 DDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVL 563

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ Y     ++ +   + EM  KG+ P V+TYN L +GL + + ++ A  LF EM+   V
Sbjct: 564 IHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGV 623

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    TY   I+      Y  +A +L++ +   + +     +S L+  L K  KL     
Sbjct: 624 SPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLR 683

Query: 182 LFQSLP 187
           L ++LP
Sbjct: 684 L-ENLP 688


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 147/254 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  +L+  M+ + + PN + ++ LID FC  G++  A+ +F  M   G   ++VT+NTLI
Sbjct: 277 EVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLI 336

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C   +V E+  L+  +  +GI P V +Y  L  G  +  +++ A+ LF+EM+  ++ 
Sbjct: 337 SGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMV 396

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   Y++ IDGLCK+G I  A ELF T+        +  Y+ LID  CKI  ++   EL
Sbjct: 397 LDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIEL 456

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   GL P V+TYNI+I+G+C   ++ +A +L   M++K +AP+ +T+N+L  G  +
Sbjct: 457 FKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCK 516

Query: 243 NNETSKVVELLHRM 256
           +   S   EL   M
Sbjct: 517 SGRISDAWELFKVM 530



 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 137/258 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   ++  G+ P+   Y++LI GFC TG+    ++L   M       NV T+N LI
Sbjct: 242 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 301

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +C+   + E+  +++ M+ +G +P +VT+NTL  G      V  A KLFD +    + 
Sbjct: 302 DAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGIL 361

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y   I G CK   I EA  LF  +R     L I  YS LIDGLCK G++  AWEL
Sbjct: 362 PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 421

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   G  PNV+TYNI+I  FC    +D   +LF  M  KG+ P  +T+N L+ G  +
Sbjct: 422 FSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCK 481

Query: 243 NNETSKVVELLHRMDERN 260
           +    + + LL  M  +N
Sbjct: 482 SKRIREAMNLLSVMQSKN 499



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 8/241 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + +LM++RG +P+   ++TLI G CL G +  AR+LF ++   G + +V +Y  
Sbjct: 310 MIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTI 369

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK K ++E+++L++EM  K +   +V Y++L  GL +  ++ +A +LF  + +  
Sbjct: 370 LIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDG 429

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
                 TYN  ID  CK   I    ELF+    L C  G+      Y+ LI+G CK  ++
Sbjct: 430 PPPNVITYNILIDAFCKIQDIDMGIELFK----LMCGKGLTPTVLTYNILINGYCKSKRI 485

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  L   +    L P+ +TYN +  G C  G++  A +LF  M   G   +  T+N L
Sbjct: 486 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 545

Query: 237 M 237
           +
Sbjct: 546 L 546



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 106/172 (61%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + M  + +  +  +YS+LIDG C +G I  A ELF +++ +G   NV+TYN 
Sbjct: 380 IDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNI 439

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK +D++  + L+  M  KG+ PTV+TYN L +G  +  ++  A+ L   MQ  +
Sbjct: 440 LIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKN 499

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           +A ++ TYN+  DGLCK+G I +A ELF+ + V    + +  Y+ L+D  CK
Sbjct: 500 LAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 6/215 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L D + +RG+ P+ + Y+ LI G+C    ID A  LF  M     + ++V Y++LI
Sbjct: 347 EARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLI 406

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK+  +  +  L+S + + G  P V+TYN L     +I  ++  ++LF  M    + 
Sbjct: 407 DGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLT 466

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I+G CK+  I EA  L   ++          Y+ L DGLCK G++  AWEL
Sbjct: 467 PTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWEL 526

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           F+ +   G   +V TYN+++  FC      KA D+
Sbjct: 527 FKVMHVGGPPVDVATYNVLLDAFC------KAQDV 555



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 1/242 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M+ +GV P+ F  S  I+ +C  GE+  A  +   +   G   N +T  T++ 
Sbjct: 103 AISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMK 162

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C   +V+++++ +  + ++G+    V Y TL +GL +I +   A +L  EM+   V  
Sbjct: 163 GLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKP 222

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YN  ID  CK+    +A +L+  +  +  +  I  Y+ LI G C+ G+     +L 
Sbjct: 223 NIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLM 282

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
             +    + PNV T+N++I  FC  G+M +A  +F  M  +G  P+ VTFNTL+ G C+ 
Sbjct: 283 CEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLH 342

Query: 243 NN 244
            N
Sbjct: 343 GN 344



 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 128/260 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  +L ++++RG +PN    +T++ G C+ GE+ +A +   ++   G + + V Y T
Sbjct: 135 MGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGT 194

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK     ++  L  EM  + ++P +V YN +     +      A  L+ ++    
Sbjct: 195 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 254

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I G C+ G   E  +L   +        +  ++ LID  C+ GK+  A 
Sbjct: 255 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 314

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  + + G  P++VT+N +I G C  G + +A  LF  +  +G+ P+  ++  L++G 
Sbjct: 315 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 374

Query: 241 IRNNETSKVVELLHRMDERN 260
            +     + V L + M  +N
Sbjct: 375 CKCKRIDEAVSLFNEMRCKN 394



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 131/257 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A    D +  +G+  +   Y TLI+G C  G    A +L   M+      N+V YN 
Sbjct: 170 VQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNM 229

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK +   ++ +LY +++  GI P ++TY +L  G     Q     +L  EM + +
Sbjct: 230 IIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN 289

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+N  ID  C+ G ++EA  +F  +     +  I  ++ LI G C  G +  A 
Sbjct: 290 INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 349

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF ++   G++P+V +Y I+I G+C   ++D+A  LF +M  K +  + V +++L+ G 
Sbjct: 350 KLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409

Query: 241 IRNNETSKVVELLHRMD 257
            ++   S   EL   ++
Sbjct: 410 CKSGRISYAWELFSTIN 426



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 120/259 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + +I     P+   ++T+I           A  L   M   G   ++ T + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            IN YC   ++  + ++   +L +G +P  +T  T+  GL    +V+ A+   D +    
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y T I+GLCK G  ++A +L + +     +  I  Y+ +ID  CK      A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +  +G+ P+++TY  +I GFC  GQ  +   L  +M  K + PN  TFN L+   
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  +   + + M +R
Sbjct: 305 CRKGKMIEAQGMFNLMVKR 323



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 48/106 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    L  LM  +G+ P    Y+ LI+G+C +  I  A  L   M       + +TYN+
Sbjct: 450 IDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNS 509

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           L +G CK+  + ++  L+  M   G    V TYN L     +   V
Sbjct: 510 LFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 72/158 (45%)

Query: 100 LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
           L   + ++ A+ LF+ + +         +NT I  + K  +   A  L + +        
Sbjct: 59  LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           I   S  I+  C +G++  A+ +   + + G  PN +T   ++ G C +G++ KA D   
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 178

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           ++ A+G+  + V + TL+ G  +   +    +LL  M+
Sbjct: 179 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEME 216


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 137/260 (52%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L++ M+ RG+  NA  YS L+DG C    +D A  L  +M   GC   VVTYN+
Sbjct: 90  VDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNS 149

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G+C+ + V+E+     +M+++G  P ++TY  L  G  +   V   L+L  E+    
Sbjct: 150 IITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG 209

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY+T IDGLCK G + +A ++F     + C      Y+ LI G C+ G ++ A 
Sbjct: 210 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEE---MSCAPTAITYNSLIGGYCRAGDMDEAI 266

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +      P+VVTY  ++  FC  G++D A++LF  M A  ++P+ VTF +L+ G 
Sbjct: 267 RLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 326

Query: 241 IRNNETSKVVELLHRMDERN 260
                    +ELL  +  R 
Sbjct: 327 CGEGRMEDALELLEEITRRG 346



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 134/256 (52%), Gaps = 5/256 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  + +RG  P+   YST+IDG C  G +  A ++F  M    C    +TYN+LI GYC
Sbjct: 201 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYC 257

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  D++E++ L  +M+     P VVTY TL     ++ +++ A +LF +M  + ++ +  
Sbjct: 258 RAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 317

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+ + +DGLC  G + +A EL   +    C   I  Y+C++DG CK  ++  A EL    
Sbjct: 318 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADF 377

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLGCI-RNN 244
              G +PN VTYNI++ G C  G+ D+A      + ++ G  P  V    ++L  + R+ 
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 437

Query: 245 ETSKVVELLHRMDERN 260
            T   V+    M +R 
Sbjct: 438 RTDDAVQFYEEMIQRG 453



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 123/256 (48%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++L  M+     P+    + ++   CL   +D AREL   M   G   N +TY+ 
Sbjct: 55  LRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSA 114

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK + ++E++ L   M  +G  PTVVTYN++  G     +V+ A    ++M    
Sbjct: 115 LVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG 174

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   I G CK+  +    EL   +        I  YS +IDGLCK G+L  A 
Sbjct: 175 CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ +      P  +TYN +I G+C  G MD+A  L   M     AP+ VT+ TLM   
Sbjct: 235 DIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291

Query: 241 IRNNETSKVVELLHRM 256
            +        EL  +M
Sbjct: 292 CKMGRLDDAYELFQQM 307



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 123/254 (48%), Gaps = 2/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA RLL  M+     P+   Y+TL+  FC  G +D A ELF  M  N    +VVT+ +
Sbjct: 262 MDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 321

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C    +E++L L  E+  +G  PT+ TYN +  G  + +QV  A +L  + +   
Sbjct: 322 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRG 381

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL--KCELGIEAYSCLIDGLCKIGKLET 178
               T TYN  + G C+ G   +A +    L      C   +  Y+ ++D LC+ G+ + 
Sbjct: 382 FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDD 441

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A + ++ + + G +P   T+  ++   C   Q  +AH+L  +M   G  P   T + ++ 
Sbjct: 442 AVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 501

Query: 239 GCIRNNETSKVVEL 252
              R     K  EL
Sbjct: 502 AYCRAGMIQKADEL 515



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 3/239 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   Y+ L+ G      +  A ++   M     + +  T   ++   C    V+++  L
Sbjct: 37  PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 96

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML +G+    +TY+ L  GL +  +++ A+ L + M     A    TYN+ I G C+
Sbjct: 97  VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              + EA      +    C   I  Y+ LI G CK   +    EL   + R G  P++VT
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           Y+ +I G C  G++  A D+F +M     AP  +T+N+L+ G  R  +  + + LL +M
Sbjct: 217 YSTVIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLGKM 272



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 117/239 (48%), Gaps = 1/239 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P   +++ +I G C  G +  A  ++  M+ +    + +TY  L++G  K + + +++ +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EM+S    P   T   +   L    +V+ A +L +EM H  +AA   TY+  +DGLCK
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              + EA  L  T+    C   +  Y+ +I G C+  +++ A    + +   G  P+++T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           Y  +I GFC    + +  +L  ++  +G  P+ VT++T++ G  +       V++   M
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 37/190 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  LL+ + +RG  P  + Y+ ++DG+C   ++ +A EL       G + N VTYN 
Sbjct: 332 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNI 391

Query: 61  LINGYCKTKDVEESLN-------------------------------------LYSEMLS 83
           L+ G C+    +++L                                       Y EM+ 
Sbjct: 392 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 451

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           +G  P   T+ T+   L + HQ + A +L +EM          T +  +   C+ G I +
Sbjct: 452 RGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQK 511

Query: 144 AAELFRTLRV 153
           A EL   LR+
Sbjct: 512 ADELASELRL 521



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 1/133 (0%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +N  I GLC+ G +  A  ++R +           Y+ L+ GL K  +L  A ++ Q + 
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
               +P+  T  +++   C   ++D A +L  +M  +G+A N +T++ L+ G  +     
Sbjct: 67  SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126

Query: 248 KVVELLHRMDERN 260
           + V L+  M ER 
Sbjct: 127 EAVALVETMAERG 139


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 139/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E   LL  M+++G+ PN   YST+I      G ++ A  ++  M + GC  NV T+ +
Sbjct: 265 VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTS 324

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GY     V E+LN+++ M  +G  P VV YNTL HGL    ++  A+ +  +M+ + 
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +   STY   IDG  K G +V A+E++  +    C   +  Y+ +++ LC+      AW
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAW 444

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +      PN VT+N  I G C  G+++ A +LF  ME  G +PN  T+N ++ G 
Sbjct: 445 SLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGL 504

Query: 241 IRNNETSKVVELLHRMDER 259
           ++ N   + +EL+  M+E+
Sbjct: 505 LKENRIKEALELVTEMEEK 523



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 133/255 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + + M + G  PN   Y+TLI G C  G++  A  +   M+ NGC  NV TY  LI
Sbjct: 337 EALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALI 396

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K  D+  +  ++++M++ G  P VV Y ++ + L        A  L ++M   +  
Sbjct: 397 DGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCP 456

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T T+NTFI GLC +G +  A  LF  +    C   I+ Y+ ++DGL K  +++ A EL
Sbjct: 457 PNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALEL 516

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+  N+VTYN +  GFCN G+ ++A  L   M   GV P+ +T+NTL      
Sbjct: 517 VTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCM 576

Query: 243 NNETSKVVELLHRMD 257
             +    ++LL ++ 
Sbjct: 577 QGKVKTAIQLLDKLS 591



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  +   M + G  PN   Y  LIDGF   G++  A E++  M  NGC+ NVV Y +
Sbjct: 370 MGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTS 429

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  C++    ++ +L  +M +    P  VT+NT   GL    +VE A+ LF +M+   
Sbjct: 430 MVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYG 489

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYN  +DGL K   I EA EL   +     EL +  Y+ +  G C +GK E A 
Sbjct: 490 CSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEAL 549

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTLMLG 239
           +L   +   G+ P+ +TYN + + +C  G++  A  L   + A G   P    + +L+ G
Sbjct: 550 KLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWG 609

Query: 240 CIRNNETSKVVELLHRM 256
                   + V  L +M
Sbjct: 610 ICNQIGVEEAVLYLDKM 626



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 130/260 (50%), Gaps = 5/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LL  M  +G  P+   Y+T+I      G+++ AREL +         NV  YN 
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVSVYNA 254

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C+   V+E   L  +M+ KGI P V+TY+T+   L  I  VE AL ++ +M    
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG 314

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    T+ + + G    G ++EA  ++  +     E  + AY+ LI GLC  GK+  A 
Sbjct: 315 CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAV 374

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   + R G  PNV TY  +I GF   G +  A +++  M   G  PN V + +++   
Sbjct: 375 SVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVL 434

Query: 241 IRNNETSKVVELLHRMDERN 260
            R++  S+   L+ +M   N
Sbjct: 435 CRSSMFSQAWSLIEKMSTDN 454



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 3/238 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS + + M+  G  PN  VY+++++  C +    +A  L   M  + C  N VT+NT I 
Sbjct: 408 ASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIK 467

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C +  VE ++NL+ +M   G  P + TYN +  GL + ++++ AL+L  EM+   +  
Sbjct: 468 GLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMEL 527

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYNT   G C  G   EA +L   + V   +     Y+ L    C  GK++TA +L 
Sbjct: 528 NLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLL 587

Query: 184 QSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLD-MEAKGVAPNCVTFNTLMLG 239
             L   G  +P V  Y  ++ G CN   +++A  L+LD M  +G+  N  T+N L+ G
Sbjct: 588 DKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAV-LYLDKMLNEGICLNAATWNALVRG 644



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 2/218 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A  L++ M      PN   ++T I G C +G ++ A  LF  M+  GC  N+ TYN +
Sbjct: 441 SQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEV 500

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G  K   ++E+L L +EM  KG+   +VTYNT+F G   + + E ALKL  +M    V
Sbjct: 501 LDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGV 560

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-KCELGIEAYSCLIDGLCKIGKLETAW 180
             +  TYNT     C  G +  A +L   L    K    + AY+ L+ G+C    +E A 
Sbjct: 561 KPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAV 620

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND-GQMDKAHDL 217
                +   G+  N  T+N ++ G  N  G +   H L
Sbjct: 621 LYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHIL 658



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 5/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    LL  M   G+  +  ++  +I+ +   G  ++A ++F  +   GC   V  YN 
Sbjct: 95  VDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNH 154

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++        +    +YS M   G  P V TYN L   L + ++V+ A KL  EM +  
Sbjct: 155 LLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKG 214

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y T I  + K G + EA EL      ++ +  +  Y+ LI+G C+  K++  +
Sbjct: 215 CEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVF 269

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+ PNV+TY+ +I      G ++ A  ++  M  +G +PN  TF +LM G 
Sbjct: 270 LLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGY 329

Query: 241 IRNNETSKVVELLHRMDE 258
                  + + + +RM E
Sbjct: 330 FMRGRVLEALNIWNRMAE 347



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 5/217 (2%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
             Y  +I+      ++D  + L   M + G   +   +  +IN Y +    E++L ++  
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           +   G +PTV  YN L   +   ++ +    ++  M+         TYN  +  LCKN  
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           +  A +L   +    CE  + +Y+ +I  + K+GK+E A EL      +   PNV  YN 
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNA 254

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +I+GFC + ++ +   L   M  KG+ PN +T++T++
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVI 291



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 76/155 (49%)

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           SK  + T +TY  +   L     V+    L  +M+   ++     +   I+   + G   
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A ++F  +R   C+  ++ Y+ L+D +    + +    ++ ++ R G  PNV TYNI++
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              C + ++D A  L ++M  KG  P+ V++ T++
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVI 226



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 5/207 (2%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           H  +TY  +I    +  DV+    L  +M  +GI  +   +  + +    +   E ALK+
Sbjct: 77  HTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKM 136

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           F  ++          YN  +D +           ++  ++    E  +  Y+ L+  LCK
Sbjct: 137 FYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCK 196

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
             +++ A +L   +   G  P+VV+Y  +I      G++++A +L +  +     PN   
Sbjct: 197 NNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVSV 251

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           +N L+ G  R  +  +V  LL +M E+
Sbjct: 252 YNALINGFCREYKVKEVFLLLGQMVEK 278


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  L++ M  +G  PN   Y+ LID FC  G ++ AR +   M   G   N V YN LI
Sbjct: 425 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 484

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V+++LN++ +M SKG +P + T+N+L  GL ++++ E AL L+ +M    V 
Sbjct: 485 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 544

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T TYNT I    + G + EA +L   +    C L    Y+ LI  LC+ G +E    L
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 604

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   GL PN ++ NI+I+G C  G +  A +   DM  +G+ P+ VT+N+L+ G  +
Sbjct: 605 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 664

Query: 243 NNETSKVVELLHRM 256
                + + L  ++
Sbjct: 665 TGRAQEALNLFDKL 678



 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 137/288 (47%), Gaps = 32/288 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M + G  PNA VY TLI      G ++   +L   M + GC+ +V T+N 
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G CK   + E+  L   ML +G  P   TY  L HGL  + +V+ A  L +++ + +
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPN 370

Query: 121 V--------------------------------AAETSTYNTFIDGLCKNGYIVEAAELF 148
           V                                  +  TYNT I GLCK GY+V A EL 
Sbjct: 371 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 430

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +++  CE  +  Y+ LID  CK G+LE A  +   +   GL  N V YN +I   C D
Sbjct: 431 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 490

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            ++  A ++F DM +KG  P+  TFN+L+ G  + N+  + + L   M
Sbjct: 491 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 538



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 132/286 (46%), Gaps = 32/286 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF------------------- 43
           EA++L+D M+ RG  PN+F Y  L+ G C  G++D AR L                    
Sbjct: 323 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYV 382

Query: 44  -------------VSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                         SM   GC  ++ TYNTLI G CK   +  +  L +EM  KG  P V
Sbjct: 383 SRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 442

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +TY  L     +  ++E A  + DEM    +A     YN  I  LCK+  + +A  +F  
Sbjct: 443 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 502

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C+  I  ++ LI GLCK+ K E A  L+Q +   G++ N +TYN +IH F   G 
Sbjct: 503 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           M +A  L  DM  +G   + +T+N L+    R     K + L   M
Sbjct: 563 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 1/260 (0%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA  ++ + M+  G  P+ F Y+TLI G C  G +  AREL   M I GC  NV+TY 
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+ +CK   +EE+ N+  EM  KG+    V YN L   L +  +V+ AL +F +M   
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 506

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+N+ I GLCK     EA  L++ + +         Y+ LI    + G ++ A
Sbjct: 507 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 566

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L   +   G   + +TYN +I   C  G ++K   LF DM +KG+ PN ++ N L+ G
Sbjct: 567 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 626

Query: 240 CIRNNETSKVVELLHRMDER 259
             R       +E L  M  R
Sbjct: 627 LCRTGNIQHALEFLRDMIHR 646



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 124/245 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +   M  +G +P+ F +++LI G C   + + A  L+  M + G + N +TYNT
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + +   ++E+L L ++ML +G     +TYN L   L     +E  L LF++M    
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     + N  I+GLC+ G I  A E  R +        I  Y+ LI+GLCK G+ + A 
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L   G+ P+ +TYN +I   C +G  D AH L       G  PN VT+  L+   
Sbjct: 673 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 732

Query: 241 IRNNE 245
           I+  +
Sbjct: 733 IKEGD 737



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 107/211 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  L   M+  GV  N   Y+TLI  F   G +  A +L   M   GC  + +TYN L
Sbjct: 529 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 588

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I   C+  ++E+ L L+ +M+SKG+ P  ++ N L +GL     ++HAL+   +M H  +
Sbjct: 589 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 648

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ I+GLCK G   EA  LF  L+V         Y+ LI   CK G  + A  
Sbjct: 649 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 708

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           L       G +PN VT+ I++  F  +G  +
Sbjct: 709 LLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 5/249 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGY 65
           LL  M Q G+     ++  ++  +   G   +A  L + M  +  C     +YN +++  
Sbjct: 151 LLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVL 210

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
                 +   N++ EMLSKGI PTV T+  +   L  +++V+ A  L  +M         
Sbjct: 211 LAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNA 270

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             Y T I  L K G + E  +L   + ++ C   +  ++  I GLCK+ ++  A +L   
Sbjct: 271 IVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDR 330

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G  PN  TY +++HG C  G++D+A  L      K   PN V FNTL+ G +    
Sbjct: 331 MLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL----NKVPNPNVVLFNTLINGYVSRGR 386

Query: 246 TSKVVELLH 254
             +   ++H
Sbjct: 387 LDEAKAVMH 395



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 5/242 (2%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           VY  LID     GE      L + M   G +     +  ++  Y +     ++  L  +M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190

Query: 82  LSKGI---RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             +G+    PT  +YN +   L   +  +    +F EM    ++    T+   +  LC  
Sbjct: 191 --RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLV 248

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             +  A  L + +    C      Y  LI  L K+G++    +L + +  +G +P+V T+
Sbjct: 249 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTF 308

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N  IHG C   ++ +A  L   M  +G  PN  T+  LM G  R  +  +   LL+++  
Sbjct: 309 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 368

Query: 259 RN 260
            N
Sbjct: 369 PN 370


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  L++ M  +G  PN   Y+ LID FC  G ++ AR +   M   G   N V YN LI
Sbjct: 407 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 466

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V+++LN++ +M SKG +P + T+N+L  GL ++++ E AL L+ +M    V 
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T TYNT I    + G + EA +L   +    C L    Y+ LI  LC+ G +E    L
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 586

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   GL PN ++ NI+I+G C  G +  A +   DM  +G+ P+ VT+N+L+ G  +
Sbjct: 587 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 646

Query: 243 NNETSKVVELLHRM 256
                + + L  ++
Sbjct: 647 TGRAQEALNLFDKL 660



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 137/288 (47%), Gaps = 32/288 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M + G  PNA VY TLI      G ++   +L   M + GC+ +V T+N 
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G CK   + E+  L   ML +G  P   TY  L HGL  + +V+ A  L +++ + +
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPN 352

Query: 121 V--------------------------------AAETSTYNTFIDGLCKNGYIVEAAELF 148
           V                                  +  TYNT I GLCK GY+V A EL 
Sbjct: 353 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 412

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +++  CE  +  Y+ LID  CK G+LE A  +   +   GL  N V YN +I   C D
Sbjct: 413 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 472

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            ++  A ++F DM +KG  P+  TFN+L+ G  + N+  + + L   M
Sbjct: 473 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 520



 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 132/286 (46%), Gaps = 32/286 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF------------------- 43
           EA++L+D M+ RG  PN+F Y  L+ G C  G++D AR L                    
Sbjct: 305 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYV 364

Query: 44  -------------VSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                         SM   GC  ++ TYNTLI G CK   +  +  L +EM  KG  P V
Sbjct: 365 SRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 424

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +TY  L     +  ++E A  + DEM    +A     YN  I  LCK+  + +A  +F  
Sbjct: 425 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 484

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C+  I  ++ LI GLCK+ K E A  L+Q +   G++ N +TYN +IH F   G 
Sbjct: 485 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           M +A  L  DM  +G   + +T+N L+    R     K + L   M
Sbjct: 545 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 1/260 (0%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA  ++ + M+  G  P+ F Y+TLI G C  G +  AREL   M I GC  NV+TY 
Sbjct: 369 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 428

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+ +CK   +EE+ N+  EM  KG+    V YN L   L +  +V+ AL +F +M   
Sbjct: 429 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 488

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+N+ I GLCK     EA  L++ + +         Y+ LI    + G ++ A
Sbjct: 489 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 548

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L   +   G   + +TYN +I   C  G ++K   LF DM +KG+ PN ++ N L+ G
Sbjct: 549 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 608

Query: 240 CIRNNETSKVVELLHRMDER 259
             R       +E L  M  R
Sbjct: 609 LCRTGNIQHALEFLRDMIHR 628



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 124/245 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +   M  +G +P+ F +++LI G C   + + A  L+  M + G + N +TYNT
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + +   ++E+L L ++ML +G     +TYN L   L     +E  L LF++M    
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     + N  I+GLC+ G I  A E  R +        I  Y+ LI+GLCK G+ + A 
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L   G+ P+ +TYN +I   C +G  D AH L       G  PN VT+  L+   
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 714

Query: 241 IRNNE 245
           I+  +
Sbjct: 715 IKEGD 719



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 107/211 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  L   M+  GV  N   Y+TLI  F   G +  A +L   M   GC  + +TYN L
Sbjct: 511 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 570

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I   C+  ++E+ L L+ +M+SKG+ P  ++ N L +GL     ++HAL+   +M H  +
Sbjct: 571 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 630

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ I+GLCK G   EA  LF  L+V         Y+ LI   CK G  + A  
Sbjct: 631 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 690

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           L       G +PN VT+ I++  F  +G  +
Sbjct: 691 LLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 5/249 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGY 65
           LL  M Q G+     ++  ++  +   G   +A  L + M  +  C     +YN +++  
Sbjct: 133 LLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVL 192

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
                 +   N++ EMLSKGI PTV T+  +   L  +++V+ A  L  +M         
Sbjct: 193 LAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNA 252

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             Y T I  L K G + E  +L   + ++ C   +  ++  I GLCK+ ++  A +L   
Sbjct: 253 IVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDR 312

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G  PN  TY +++HG C  G++D+A  L      K   PN V FNTL+ G +    
Sbjct: 313 MLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL----NKVPNPNVVLFNTLINGYVSRGR 368

Query: 246 TSKVVELLH 254
             +   ++H
Sbjct: 369 LDEAKAVMH 377



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 5/242 (2%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           VY  LID     GE      L + M   G +     +  ++  Y +     ++  L  +M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 82  LSKGI---RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             +G+    PT  +YN +   L   +  +    +F EM    ++    T+   +  LC  
Sbjct: 173 --RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLV 230

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             +  A  L + +    C      Y  LI  L K+G++    +L + +  +G +P+V T+
Sbjct: 231 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTF 290

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N  IHG C   ++ +A  L   M  +G  PN  T+  LM G  R  +  +   LL+++  
Sbjct: 291 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 350

Query: 259 RN 260
            N
Sbjct: 351 PN 352


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 141/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M  +G++PN   Y+ +I+G C  G +  A E+   M   G   + VTYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYCK  +  ++L +++EM+  G+ P+VVTY  L + + +   +  A++ FD+M+   
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T IDG  + G + EA  +   +        +  Y+  I G C + ++E A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + Q +   GL P+VV+Y+ +I GFC  G++D+A  +  +M  KGV+P+ VT+++L+ G 
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 241 IRNNETSKVVELLHRM 256
                 ++  +L   M
Sbjct: 301 CEMRRLTEACDLSQEM 316



 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 35/284 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+  V PN + Y+ LI GFC  GE+ +    F  M+ NGC+ NVVTYNTLI+ YCK   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E+  L   M SKG++P +++YN + +GL     ++ A ++ +EM +     +  TYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 131 FIDGLCKNGYIVE-----------------------------------AAELFRTLRVLK 155
            ++G CK G   +                                   A E F  +R+  
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                  Y+ LIDG  + G L  A+ +   +   G  P+VVTYN  IHG C   +M++A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +  +M  KG+AP+ V+++T++ G  R  E  +  ++   M E+
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 18/268 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  ++  M+++G+ P+   YST+I GFC  GE+DRA ++   M   G   + VTY++
Sbjct: 236 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+ + + E+ +L  EML  G+ P   TY TL +       +  AL L DEM H  
Sbjct: 296 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKCELGIEAYSC 165
              +  TY+  I+GL K     EA  L               + TL      +  ++   
Sbjct: 356 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVA 415

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI G C  G +  A  +F+S+      P    YN++IHG C  G + KA +L+ +M   G
Sbjct: 416 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 475

Query: 226 VAPNCVTFNTLMLGCIR---NNETSKVV 250
             P+ VT  TL+    +   N E S+V+
Sbjct: 476 FVPHTVTVITLIKALFKEGMNEEMSEVI 503



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 15/235 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++   M+++GV P+A  YS+LI G C    +  A +L   M   G   +  TY T
Sbjct: 271 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 330

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC   D+ ++L+L+ EM+ KG  P  VTY+ L +GL +  +   A +L  ++ + +
Sbjct: 331 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 390

Query: 121 VAAETSTYNTFID---------------GLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
                 TY+T I+               G C  G + EA  +F ++     + G   Y+ 
Sbjct: 391 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNV 450

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
           +I G C+ G L  A+ L++ +   G +P+ VT   +I     +G  ++  ++  D
Sbjct: 451 IIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 27/174 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA R+ + M++R  +P   VY+ +I G C  G + +A  L+  M  +G + + VT  T
Sbjct: 426 MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVIT 485

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL-------KLF 113
           LI    K    EE     SE++   +R   +    L   L EI+  E  +       +L+
Sbjct: 486 LIKALFKEGMNEE----MSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLY 541

Query: 114 DEMQHSDVAAET-------STYNTFI-------DGLCKNG--YIVEAAELFRTL 151
           +++    VA+         ++   F+       DG   +G  ++ E  ELF+ L
Sbjct: 542 NKLSLKCVASSVPPGALTQTSQKIFLSRIIANFDGTAVDGAAHVGEGGELFKGL 595


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 135/257 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  M+  GV PN   YS +I+  C++G ++ A  LF  M + GC  N+ T+  LI 
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G      + E+L+L+  M+  G  P VV YNTL HGL     +E AL++ D+MQ S    
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             +TY+  IDG  K+G +V A+E +  +    C   +  Y+C++D LCK    + A  L 
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G  PN +T+N  I G C +G+++ A  L   M+  G  PN  T+N L+    R 
Sbjct: 443 EKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502

Query: 244 NETSKVVELLHRMDERN 260
           N+  +   L   ++ RN
Sbjct: 503 NKYEEAFGLFQEIEARN 519



 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 138/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L  LMIQ G  PN   Y+TLI G C  G ++ A ++   M  +GC+ NV TY+ LI
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K+ D+  +   ++ M+S G RP VVTY  +   L +    + A  L ++M      
Sbjct: 392 DGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT 451

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T T+NTFI GLC NG +  A +L   ++   C   I  Y+ L+D L ++ K E A+ L
Sbjct: 452 PNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +    L PN+VTYN +++GF   G M +A  LF     +G AP+ +T+NT++    +
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571

Query: 243 NNETSKVVELLHRMDE 258
             +     +L+ R+  
Sbjct: 572 QGKVKIAAQLVERVSS 587



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 121/241 (50%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P+  VY+ LIDG C  G I+ A +L   M  NG   NVV+Y+ +IN  C + +VE +  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L+++M  +G    + T+  L  G F   ++  AL L+  M           YNT I GLC
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
            NG + EA ++   ++   C   +  YS LIDG  K G L  A E +  +   G  PNVV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  M+   C +   D+A+ L   M  +G  PN +TFNT + G   N      ++LL RM
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 257 D 257
            
Sbjct: 481 Q 481



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 5/246 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+ PN F Y+ L+   C    +D A +LFV M   GC  + VTY T+++  CK   
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++  L         +P+V  YN L  G+ +  ++E A+KL  EM  + V     +Y+ 
Sbjct: 230 IDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+ LC +G +  A  LF  + +  C+  I  ++ LI G    GKL  A +L++ + + G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             PNVV YN +IHG C++G +++A  +   M+  G  PN  T++ L+ G  ++ +     
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404

Query: 251 ELLHRM 256
           E  +RM
Sbjct: 405 ETWNRM 410



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 123/256 (48%), Gaps = 5/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD    +L  M   G+     ++  +I+G+   G  ++A ++F  +   GC   V  YN 
Sbjct: 90  MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++        +    LY+ M   G+ P V TYN L   L +  +V+ A KLF EM +  
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T +  LCK G I +A EL    +       +  Y+ LIDG+CK G++E A 
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-----SVPVYNALIDGMCKEGRIEVAI 264

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ PNVV+Y+ +I+  C  G ++ A  LF  M  +G   N  TF  L+ GC
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324

Query: 241 IRNNETSKVVELLHRM 256
               +  + ++L   M
Sbjct: 325 FMRGKLYEALDLWKLM 340



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 2/218 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A+ L++ M   G  PN   ++T I G C  G ++ A +L   M  +GC+ N+ TYN L
Sbjct: 436 DQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   +    EE+  L+ E+ ++ ++P +VTYNT+ +G      +  AL+LF +      
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT 555

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAW 180
           A ++ TYNT I   CK G +  AA+L   +  +K     I  Y+ LI G C    +E A 
Sbjct: 556 APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAM 615

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND-GQMDKAHDL 217
                    G+ PN  T+N ++  F +  G M   H L
Sbjct: 616 AFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHIL 653



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 1/188 (0%)

Query: 69  KDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           +++   L  +S +  S   + T  TY  +   L    +++    +  +M+   +      
Sbjct: 52  RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +   I+G  + G   +A ++F  +    C+  +  Y+ L+D L    K +    L+ ++ 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           + GL+PNV TYNI++   C + ++D AH LF++M  KG  P+ VT+ T++    +  +  
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 248 KVVELLHR 255
              EL  R
Sbjct: 232 DARELAGR 239



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           M EA +L    + RG  P++  Y+T+I  +C  G++  A +L   +      H +++TY 
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           +LI G C   ++EE++    + +++GI P   T+N L    F+
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 69/157 (43%), Gaps = 1/157 (0%)

Query: 104 HQVEHALKLFDEMQHSDVAAET-STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
             +   L  F  + +S+    T STY   I+ L +   +     + + +++       + 
Sbjct: 52  RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           + C+I+G  ++G  E A ++F  +   G  P V  YN ++    ++ +    + L+ +M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             G+ PN  T+N L+    +N+      +L   M  +
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNK 208


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 141/258 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+   +L  M + G+ PN  VY+TLIDG C  G+I+R ++LF  M     + N  TY  
Sbjct: 167 LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+ K    ++ + LY +M   GI P V TYN++        ++ +A +LFDEM+   
Sbjct: 227 LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA    TYNT I GLC+   ++EA  L   ++       + +Y+ LIDG C IG L+ A 
Sbjct: 287 VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G  P++ TYNI+I GF          D+  +MEA+G++P+ VT+  LM   
Sbjct: 347 SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 406

Query: 241 IRNNETSKVVELLHRMDE 258
           +R++   K  ++   M++
Sbjct: 407 VRSDNIEKAFQIYSSMEK 424



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 136/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L D M +RGV  N   Y+TLI G C    +  A  L   M  +G   N+++YNT
Sbjct: 272 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC   +++++ +L+++M S G  P++ TYN L  G  E         +  EM+   
Sbjct: 332 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 391

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TY   +D L ++  I +A +++ ++        I  Y  LI GLC +G ++ A 
Sbjct: 392 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 451

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+SL  + L PN V YN MI+G+C +G   +A  L  +M   G+ PN  ++N+ +   
Sbjct: 452 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXIL 511

Query: 241 IRNNETSKVVELLHRMDE 258
            ++ + ++   LL  M E
Sbjct: 512 CKDEKWTEAEVLLKDMIE 529



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 131/252 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M   G+ PN + Y+++I   C  G+++ A ELF  M   G   NVVTYNTLI G C
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 302

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           + + V E+  L   M   G+ P +++YNTL  G   I  ++ A  LF++M+ S  +   +
Sbjct: 303 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 362

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G  +        ++ R +           Y+ L+D L +   +E A++++ S+
Sbjct: 363 TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 422

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL+ ++  Y ++IHG C  G M +A  LF  ++   + PN V +NT++ G  +   +
Sbjct: 423 EKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 482

Query: 247 SKVVELLHRMDE 258
            + + LL  M E
Sbjct: 483 YRALRLLKEMGE 494



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 124/234 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL+  M + G+ PN   Y+TLIDG+C  G +D+A  LF  M  +G   ++ TYN LI
Sbjct: 309 EAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILI 368

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+ + K+     ++  EM ++G+ P+ VTY  L   L     +E A +++  M+ + + 
Sbjct: 369 AGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLV 428

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+   Y   I GLC  G + EA++LF++L  +  +     Y+ +I G CK G    A  L
Sbjct: 429 ADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRL 488

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            + +   G++PNV +YN  I   C D +  +A  L  DM   G+ P+   +N +
Sbjct: 489 LKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 130/244 (53%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+ + + +  +I G C  G +D+  E+   M+  G   NVV Y TLI+G CK  D+E   
Sbjct: 147 VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK 206

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L+ +M    +     TY  L +G F++   +  ++L+++M+ + +     TYN+ I   
Sbjct: 207 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 266

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C +G +  A ELF  +R       +  Y+ LI GLC+  ++  A  L   + R GL PN+
Sbjct: 267 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 326

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           ++YN +I G+C+ G +DKA  LF  M++ G +P+  T+N L+ G      ++ V +++  
Sbjct: 327 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 386

Query: 256 MDER 259
           M+ R
Sbjct: 387 MEAR 390



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 1/206 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V+ +  +IN + +++  E++L   ++M+ +G+ P   T+N L   L + +  E A ++F
Sbjct: 81  HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 140

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +E +  +V  +  ++   I G C+ GY+ +  E+   +  +     +  Y+ LIDG CK 
Sbjct: 141 NETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 199

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G +E   +LF  +  + ++ N  TY ++I+GF   G      +L+  M+  G+ PN  T+
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           N+++  C  + + +   EL   M ER
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRER 285



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A ++   M + G+  + ++Y  LI G C+ G++  A +LF S+D      N V YNT
Sbjct: 412 IEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNT 471

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYCK      +L L  EM   G+ P V +YN+    L +  +   A  L  +M    
Sbjct: 472 MIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELG 531

Query: 121 VAAETSTYN 129
           +    S +N
Sbjct: 532 LKPSISIWN 540



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EAS+L   + +  ++PN  +Y+T+I G+C  G   RA  L   M  NG + NV +YN+
Sbjct: 447 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 506

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
            I   CK +   E+  L  +M+  G++P++  +N +    F+
Sbjct: 507 TIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 548


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 141/258 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+   +L  M + G+ PN  VY+TLIDG C  G+I+R ++LF  M     + N  TY  
Sbjct: 180 LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 239

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+ K    ++ + LY +M   GI P V TYN++        ++ +A +LFDEM+   
Sbjct: 240 LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 299

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA    TYNT I GLC+   ++EA  L   ++       + +Y+ LIDG C IG L+ A 
Sbjct: 300 VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 359

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G  P++ TYNI+I GF          D+  +MEA+G++P+ VT+  LM   
Sbjct: 360 SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 419

Query: 241 IRNNETSKVVELLHRMDE 258
           +R++   K  ++   M++
Sbjct: 420 VRSDNIEKAFQIYSSMEK 437



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 136/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L D M +RGV  N   Y+TLI G C    +  A  L   M  +G   N+++YNT
Sbjct: 285 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 344

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC   +++++ +L+++M S G  P++ TYN L  G  E         +  EM+   
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TY   +D L ++  I +A +++ ++        I  Y  LI GLC +G ++ A 
Sbjct: 405 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+SL  + L PN V YN MI+G+C +G   +A  L  +M   G+ PN  ++N+ +   
Sbjct: 465 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQIL 524

Query: 241 IRNNETSKVVELLHRMDE 258
            ++ + ++   LL  M E
Sbjct: 525 CKDEKWTEAEVLLKDMIE 542



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 131/252 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M   G+ PN + Y+++I   C  G+++ A ELF  M   G   NVVTYNTLI G C
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 315

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           + + V E+  L   M   G+ P +++YNTL  G   I  ++ A  LF++M+ S  +   +
Sbjct: 316 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 375

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G  +        ++ R +           Y+ L+D L +   +E A++++ S+
Sbjct: 376 TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 435

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL+ ++  Y ++IHG C  G M +A  LF  ++   + PN V +NT++ G  +   +
Sbjct: 436 EKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 495

Query: 247 SKVVELLHRMDE 258
            + + LL  M E
Sbjct: 496 YRALRLLKEMGE 507



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 124/234 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL+  M + G+ PN   Y+TLIDG+C  G +D+A  LF  M  +G   ++ TYN LI
Sbjct: 322 EAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILI 381

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+ + K+     ++  EM ++G+ P+ VTY  L   L     +E A +++  M+ + + 
Sbjct: 382 AGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLV 441

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+   Y   I GLC  G + EA++LF++L  +  +     Y+ +I G CK G    A  L
Sbjct: 442 ADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRL 501

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            + +   G++PNV +YN  I   C D +  +A  L  DM   G+ P+   +N +
Sbjct: 502 LKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 130/244 (53%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+ + + +  +I G C  G +D+  E+   M+  G   NVV Y TLI+G CK  D+E   
Sbjct: 160 VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK 219

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L+ +M    +     TY  L +G F++   +  ++L+++M+ + +     TYN+ I   
Sbjct: 220 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 279

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C +G +  A ELF  +R       +  Y+ LI GLC+  ++  A  L   + R GL PN+
Sbjct: 280 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 339

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           ++YN +I G+C+ G +DKA  LF  M++ G +P+  T+N L+ G      ++ V +++  
Sbjct: 340 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 399

Query: 256 MDER 259
           M+ R
Sbjct: 400 MEAR 403



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 109/206 (52%), Gaps = 1/206 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V+ +  +IN + +++  E++L  +++M+ +G+ P   T+N L   L + +  E A ++F
Sbjct: 94  HVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 153

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +E +  +V  +  ++   I G C+ GY+ +  E+   +  +     +  Y+ LIDG CK 
Sbjct: 154 NETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 212

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G +E   +LF  +  + ++ N  TY ++I+GF   G      +L+  M+  G+ PN  T+
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           N+++  C  + + +   EL   M ER
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRER 298



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 64/129 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A ++   M + G+  + ++Y  LI G C+ G++  A +LF S+D      N V YNT
Sbjct: 425 IEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNT 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYCK      +L L  EM   G+ P V +YN+    L +  +   A  L  +M    
Sbjct: 485 MIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELG 544

Query: 121 VAAETSTYN 129
           +    S +N
Sbjct: 545 LKPSISIWN 553



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EAS+L   + +  ++PN  +Y+T+I G+C  G   RA  L   M  NG + NV +YN+
Sbjct: 460 MKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
            I   CK +   E+  L  +M+  G++P++  +N +    F+
Sbjct: 520 TIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 561


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 141/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M  +G++PN   Y+ +I+G C  G +  A E+   M   G   + VTYNT
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYCK  +  ++L +++EM+  G+ P+VVTY  L + + +   +  A++ FD+M+   
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T IDG  + G + EA  +   +        +  Y+  I G C + ++E A 
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 444

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + Q +   GL P+VV+Y+ +I GFC  G++D+A  +  +M  KGV+P+ VT+++L+ G 
Sbjct: 445 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 504

Query: 241 IRNNETSKVVELLHRM 256
                 ++  +L   M
Sbjct: 505 CEMRRLTEACDLSQEM 520



 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 35/284 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+  V PN + Y+ LI GFC  GE+ +    F  M+ NGC+ NVVTYNTLI+ YCK   
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E+  L   M SKG++P +++YN + +GL     ++ A ++ +EM +     +  TYNT
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 131 FIDGLCKNGYIVE-----------------------------------AAELFRTLRVLK 155
            ++G CK G   +                                   A E F  +R+  
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                  Y+ LIDG  + G L  A+ +   +   G  P+VVTYN  IHG C   +M++A 
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 444

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +  +M  KG+AP+ V+++T++ G  R  E  +  ++   M E+
Sbjct: 445 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 488



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 18/268 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  ++  M+++G+ P+   YST+I GFC  GE+DRA ++   M   G   + VTY++
Sbjct: 440 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 499

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+ + + E+ +L  EML  G+ P   TY TL +       +  AL L DEM H  
Sbjct: 500 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKCELGIEAYSC 165
              +  TY+  I+GL K     EA  L               + TL      +  ++   
Sbjct: 560 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVA 619

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI G C  G +  A  +F+S+      P    YN++IHG C  G + KA +L+ +M   G
Sbjct: 620 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 679

Query: 226 VAPNCVTFNTLMLGCIR---NNETSKVV 250
             P+ VT  TL+    +   N E S+V+
Sbjct: 680 FVPHTVTVITLIKALFKEGMNEEMSEVI 707



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 126/246 (51%), Gaps = 8/246 (3%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK-----DVEE 73
           ++ V+  ++  +     ID+A         +G M  V++YN++++   +++       EE
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
              +Y EM+   + P V TYN L  G   + +++  L  F EM+ +       TYNT ID
Sbjct: 201 ---VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
             CK G I EA  L +++     +  + +Y+ +I+GLC+ G ++ AWE+ + +   G  P
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           + VTYN +++G+C +G   +A  +  +M   GV+P+ VT+  L+    +    ++ +E  
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377

Query: 254 HRMDER 259
            +M  R
Sbjct: 378 DQMRIR 383



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 15/235 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++   M+++GV P+A  YS+LI G C    +  A +L   M   G   +  TY T
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC   D+ ++L+L+ EM+ KG  P  VTY+ L +GL +  +   A +L  ++ + +
Sbjct: 535 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 594

Query: 121 VAAETSTYNTFID---------------GLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
                 TY+T I+               G C  G + EA  +F ++     + G   Y+ 
Sbjct: 595 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNV 654

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
           +I G C+ G L  A+ L++ +   G +P+ VT   +I     +G  ++  ++  D
Sbjct: 655 IIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 709



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA R+ + M++R  +P   VY+ +I G C  G + +A  L+  M  +G + + VT  T
Sbjct: 630 MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVIT 689

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE 107
           LI    K    EE     SE++   +R   +    L   L EI+  E
Sbjct: 690 LIKALFKEGMNEE----MSEVIGDTLRSCRLNEAELAKVLVEINHKE 732


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 132/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  ++D+M+Q G  P+ + Y+++I G C  GE+  A E    M    C  N VTYNTLI+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIS 373

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK   VEE+  L   + SKGI P V T+N+L  GL        A++LF+EM+      
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ID LC  G + EA  + + + +  C   +  Y+ LIDG CK  K+  A E+F
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIF 493

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  N VTYN +I G C   +++ A  L   M  +G  P+  T+N+L+    R 
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRG 553

Query: 244 NETSKVVELLHRM 256
            +  K  +++  M
Sbjct: 554 GDIKKAADIVQAM 566



 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 129/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   LD MI R   PN   Y+TLI   C   +++ A EL   +   G + +V T+N+LI
Sbjct: 348 EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C T++   ++ L+ EM SKG  P   TYN L   L    +++ AL +  +M+ S  A
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDG CK   I EA E+F  + V         Y+ LIDGLCK  ++E A +L
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQL 527

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P+  TYN ++  FC  G + KA D+   M + G  P+ VT+ TL+ G  +
Sbjct: 528 MDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 243 NNETSKVVELLHRM 256
                   +LL  +
Sbjct: 588 AGRVEVASKLLRSI 601



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 145/260 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ L  ++  +G+ P+   +++LI G CLT     A ELF  M   GC  +  TYN 
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C    ++E+LN+  +M   G   +V+TYNTL  G  + +++  A ++FDEM+   
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+  + TYNT IDGLCK+  + +A++L   + +   +     Y+ L+   C+ G ++ A 
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAA 560

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ Q++   G  P++VTY  +I G C  G+++ A  L   ++ KG+A     +N ++ G 
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGL 620

Query: 241 IRNNETSKVVELLHRMDERN 260
            R  +T++ + L   M E+N
Sbjct: 621 FRKRKTTEAINLFREMLEQN 640



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 137/258 (53%), Gaps = 2/258 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M  +G  P+ F Y+ LID  C  G++D A  +   M+++GC  +V+TYNTLI+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK   + E+  ++ EM   G+    VTYNTL  GL +  +VE A +L D+M       
Sbjct: 479 GFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKP 538

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ +   C+ G I +AA++ + +    CE  I  Y  LI GLCK G++E A +L 
Sbjct: 539 DKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLG-CI 241
           +S+   G+      YN +I G     +  +A +LF +M E    AP+ V++  +  G C 
Sbjct: 599 RSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCN 658

Query: 242 RNNETSKVVELLHRMDER 259
                 + V+ L  + E+
Sbjct: 659 GGGPIREAVDFLVELLEK 676



 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 134/244 (54%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q G  P+ + ++TL++G C  G +  A E+   M   G   +V TYN++I+G CK  +V+
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E++    +M+++   P  VTYNTL   L + +QVE A +L   +    +  +  T+N+ I
Sbjct: 348 EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
            GLC       A ELF  +R   CE     Y+ LID LC  GKL+ A  + + +   G  
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            +V+TYN +I GFC   ++ +A ++F +ME  GV+ N VT+NTL+ G  ++       +L
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQL 527

Query: 253 LHRM 256
           + +M
Sbjct: 528 MDQM 531



 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 134/252 (53%), Gaps = 1/252 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+ M   G+ P+   ++T++ G+   G++D A  +   M   GC  + V+ N +++G+C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270

Query: 67  KTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           K   VE++LN   EM ++ G  P   T+NTL +GL +   V+HA+++ D M       + 
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN+ I GLCK G + EA E    +    C      Y+ LI  LCK  ++E A EL + 
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           L   G++P+V T+N +I G C       A +LF +M +KG  P+  T+N L+       +
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450

Query: 246 TSKVVELLHRMD 257
             + + +L +M+
Sbjct: 451 LDEALNMLKQME 462



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 134/256 (52%), Gaps = 2/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L  M   G   +   Y+TLIDGFC   +I  A E+F  M+++G   N VTYNT
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK++ VE++  L  +M+ +G +P   TYN+L         ++ A  +   M  + 
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I GLCK G +  A++L R++++    L   AY+ +I GL +  K   A 
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI 630

Query: 181 ELFQS-LPRVGLMPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            LF+  L +    P+ V+Y I+  G CN  G + +A D  +++  KG  P   +   L  
Sbjct: 631 NLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690

Query: 239 GCIRNNETSKVVELLH 254
           G +  +    +V+L++
Sbjct: 691 GLLTLSMEETLVKLVN 706



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++P+   ++ LI   C   ++  A  +   M   G + +  T+ T++ GY +  D++ +
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFID 133
           L +  +M+  G   + V+ N + HG  +  +VE AL    EM + D    +  T+NT ++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLCK G++  A E+   +     +  +  Y+ +I GLCK+G+++ A E    +      P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           N VTYN +I   C + Q+++A +L   + +KG+ P+  TFN+L+ G          +EL 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 254 HRMDER 259
             M  +
Sbjct: 424 EEMRSK 429



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 1/239 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++P+   Y+ +++       +         M + G   +V T+N LI   C+   +  +
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + +  +M S G+ P   T+ T+  G  E   ++ AL++ ++M     +    + N  + G
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            CK G + +A    + +         +  ++ L++GLCK G ++ A E+   + + G  P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           +V TYN +I G C  G++ +A +    M  +  +PN VT+NTL+    + N+  +  EL
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 123/295 (41%), Gaps = 38/295 (12%)

Query: 4   ASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           A RL +L  ++    P   +Y  ++     +G  D  R++   M  +GC      +  LI
Sbjct: 66  ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILI 125

Query: 63  NGYCKTKDVEESL----------------NLYSEMLS--------------------KGI 86
             Y + +  +E L                + Y+ ML+                     GI
Sbjct: 126 ESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGI 185

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           +P V T+N L   L   HQ+  A+ + ++M    +  +  T+ T + G  + G +  A  
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALR 245

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP-RVGLMPNVVTYNIMIHGF 205
           +   +    C     + + ++ G CK G++E A    Q +  + G  P+  T+N +++G 
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C  G +  A ++   M  +G  P+  T+N+++ G  +  E  + VE L +M  R+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD 360


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 142/259 (54%), Gaps = 3/259 (1%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           E  +  DL+I+    G  PN  +Y+TLIDG C  GEI++A++LF  M   G + N  TY 
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LING  K    ++   +Y +M   G+ P + TYN + + L +  + + A ++FDEM+  
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V+    TYNT I GLC+   + EA ++   ++       +  Y+ LIDG C +GKL  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L + L   GL P++VTYNI++ GFC  G    A  +  +ME +G+ P+ VT+  L+  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417

Query: 240 CIRNNETSKVVELLHRMDE 258
             R++   K ++L   M+E
Sbjct: 418 FARSDNMEKAIQLRLSMEE 436



 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 139/253 (54%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + + M + GV PN + Y+ +++  C  G    A ++F  M   G   N+VTYNTLI G C
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   + E+  +  +M S GI P ++TYNTL  G   + ++  AL L  +++   ++    
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  + G C+ G    AA++ + +     +     Y+ LID   +   +E A +L  S+
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL+P+V TY+++IHGFC  GQM++A  LF  M  K   PN V +NT++LG  +   +
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494

Query: 247 SKVVELLHRMDER 259
            + ++LL  M+E+
Sbjct: 495 YRALKLLKEMEEK 507



 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 138/241 (57%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + + +  LI G C  GEI+++ +L + +   G   NVV Y TLI+G CK  ++E++ +L+
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM   G+     TY  L +GLF+    +   +++++MQ   V     TYN  ++ LCK+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G   +A ++F  +R       I  Y+ LI GLC+  KL  A ++   +   G+ PN++TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I GFC  G++ KA  L  D++++G++P+ VT+N L+ G  R  +TS   +++  M+E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401

Query: 259 R 259
           R
Sbjct: 402 R 402



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 133/254 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++ D M +RGV  N   Y+TLI G C   +++ A ++   M  +G   N++TYNTLI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C    + ++L+L  ++ S+G+ P++VTYN L  G         A K+  EM+   + 
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   ID   ++  + +A +L  ++  L     +  YS LI G C  G++  A  L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+S+      PN V YN MI G+C +G   +A  L  +ME K +APN  ++  ++    +
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525

Query: 243 NNETSKVVELLHRM 256
             ++ +   L+ +M
Sbjct: 526 ERKSKEAERLVEKM 539



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 119/229 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA++++D M   G+ PN   Y+TLIDGFC  G++ +A  L   +   G   ++VTYN 
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+C+  D   +  +  EM  +GI+P+ VTY  L         +E A++L   M+   
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+  I G C  G + EA+ LF+++    CE     Y+ +I G CK G    A 
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           +L + +    L PNV +Y  MI   C + +  +A  L   M   G+ P+
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 1/202 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  +IN Y +++ +  S++ ++EM+  G  P    +N L   +            F+E  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  ++   I G C+ G I ++ +L   L        +  Y+ LIDG CK G++E
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF  + ++GL+ N  TY ++I+G   +G   +  +++  M+  GV PN  T+N +M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 238 LGCIRNNETSKVVELLHRMDER 259
               ++  T    ++   M ER
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRER 297



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A +L   M + G+ P+   YS LI GFC+ G+++ A  LF SM    C  N V YNT
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYCK      +L L  EM  K + P V +Y  +   L +  + + A +L ++M  S 
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543

Query: 121 VAAETS 126
           +   TS
Sbjct: 544 IDPSTS 549


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 137/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A  LF  M + G + N VT+ T
Sbjct: 174 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTT 233

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 293

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 294 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 353

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++++ FC  G + K   L  +M+  G AP+ VT+N LM G
Sbjct: 354 KMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 114 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 173

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A  LFDEM    +     T+ T
Sbjct: 174 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTT 233

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 293

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 294 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 353

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 354 KMLREM 359



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   +  A  LF  + V         ++ LIDG CK G+++
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AHDL  +M  KG+ P+  T+ TL+
Sbjct: 246 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 305

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 306 DGCCKEGDLDTAFEHRKRMIQEN 328



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 18/253 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 50  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 100

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 101 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 160

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +  +  YS LI+GLCK  K++ A  LF  + 
Sbjct: 161 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEML 220

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  
Sbjct: 221 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 280

Query: 248 KVVELLHRMDERN 260
           +  +L+  M  + 
Sbjct: 281 QAHDLIDEMSMKG 293


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 142/258 (55%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  LL+ M ++G   +  +Y TLI GFC  G +DR +ELF  M   G   NVVTY+ 
Sbjct: 84  MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 143

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C+    +E+  + + M   GI P VVTY  L  GL +  +  HA+ L + M    
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  + GLCK G +++A ++ R +     +  +  Y+ L+ GLC  GK++ A 
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 263

Query: 181 ELFQSL--PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           +LF S+      L PNV T+N++I G C +G++ KA  +   M  KG   N VT+N L+ 
Sbjct: 264 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 323

Query: 239 GCIRNNETSKVVELLHRM 256
           GC++  +  + +EL  ++
Sbjct: 324 GCLKAGKIKEAMELWKQV 341



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 137/261 (52%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M   G  PN+   +TL+DG C  G +D A EL  +M   G   +VV Y T
Sbjct: 49  LKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 108

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C   +++    L+ EML KGI   VVTY+ L HGL  + Q + A  + + M    
Sbjct: 109 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 168

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   IDGLCK+G    A +L   +     E     Y+ L+ GLCK G +  A+
Sbjct: 169 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 228

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM--EAKGVAPNCVTFNTLML 238
           ++ + +   G   +VVTYN ++ G C+ G++D+A  LF  M      + PN  TFN L+ 
Sbjct: 229 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 288

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  +    +K V++  +M ++
Sbjct: 289 GLCKEGRLTKAVKIHRKMVKK 309



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 139/261 (53%), Gaps = 4/261 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ +L+ M + G+ P+   Y+ LIDG C  G    A +L   M   G   + VTYN L+
Sbjct: 156 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 215

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V ++  +   M+ KG +  VVTYNTL  GL +  +V+ ALKLF+ M  ++  
Sbjct: 216 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 275

Query: 123 AETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETA 179
            E +  T+N  I GLCK G + +A ++ R + V K   G +  Y+ L+ G  K GK++ A
Sbjct: 276 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKM-VKKGSCGNLVTYNMLLGGCLKAGKIKEA 334

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL++ +  +G +PN  TY+I+I GFC    ++ A  LF +M   G+ P    +NTLM  
Sbjct: 335 MELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMAS 394

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +     +   L   M   N
Sbjct: 395 LCKEGSLEQAKSLFQEMGNAN 415



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 128/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+  M ++ V P+   Y+TLI+G C   ++  A  L + M+  GC  N VT  TL+
Sbjct: 16  EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 75

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   ++E++ L   M  KG    VV Y TL  G      ++   +LFDEM    ++
Sbjct: 76  DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 135

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TY+  + GLC+ G   EA  +   +        +  Y+ LIDGLCK G+   A +L
Sbjct: 136 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 195

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P+ VTYN+++ G C +G +  A  +   M  KG   + VT+NTLM G   
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255

Query: 243 NNETSKVVELLHRM 256
             +  + ++L + M
Sbjct: 256 KGKVDEALKLFNSM 269



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 137/261 (52%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMI--QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +DEA +L + M   +  + PN F ++ LI G C  G + +A ++   M   G   N+VTY
Sbjct: 259 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTY 318

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+ G  K   ++E++ L+ ++L  G  P   TY+ L  G  ++  +  A  LF EM+ 
Sbjct: 319 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRT 378

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +      YNT +  LCK G + +A  LF+ +    CE  I +++ +IDG  K G  + 
Sbjct: 379 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQF 438

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             EL   +  +GL P+ +T++ +I+     G++D+A      M A G  P+ + +++L+ 
Sbjct: 439 VKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 498

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G     +T++++ LLH+M  +
Sbjct: 499 GLSSKGDTTEIINLLHQMAAK 519



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 120/234 (51%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           ++ G C  G +  A  L   M       ++V+YNTLING CK K ++E++ L  EM + G
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P  VT  TL  GL +  +++ A++L + M+     A+   Y T I G C NG +    
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ELF  +        +  YSCL+ GLC++G+ + A  +  ++   G+ P+VVTY  +I G 
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C DG+   A DL   M  KG  P+ VT+N L+ G  +        ++L  M E+
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 110/201 (54%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N ++ G C+   V E++ L  EM  K + P +V+YNTL +GL +  +++ A+ L  EM+ 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           +     + T  T +DGLCK+G + EA EL   ++    +  +  Y  LI G C  G L+ 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             ELF  +   G+  NVVTY+ ++HG C  GQ  +A+ +   M   G+ P+ VT+  L+ 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  ++   +  ++LL+ M E+
Sbjct: 182 GLCKDGRATHAMDLLNLMVEK 202



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   G+ P  F Y+TL+   C  G +++A+ LF  M    C  +++++NT+I+G  K  D
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +    L  +M+  G+RP  +T++TL + L ++ +++ A    + M  S    +   Y++
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
            + GL   G   E   L   +      L  +  S ++  LC
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 67/151 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M      P+   ++T+IDG    G+    +EL + M   G   + +T++T
Sbjct: 401 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST 460

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN   K  +++E+ +    M++ G  P  + Y++L  GL         + L  +M    
Sbjct: 461 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
              +    +T +  LC +   V+  EL  T 
Sbjct: 521 TVLDRKIVSTILTCLCHSIQEVDVMELLPTF 551



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   L+ M+  G  P+A VY +L+ G    G+      L   M   G + +    +T
Sbjct: 471 LDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVST 530

Query: 61  LINGYCKT---KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           ++   C +    DV E L  + +  S+G     ++ N L   L ++HQ    L+L
Sbjct: 531 ILTCLCHSIQEVDVMELLPTFFQGTSEG---ASISCNEL---LMQLHQSHPKLQL 579


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 137/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A  LF  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++++ FC  G + K   L  +M+  G AP+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A  LFDEM    +     T+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   +  A  LF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AHDL  +M  KG+ P+  T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQEN 347



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 18/253 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 119

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +  +  YS LI+GLCK  K++ A  LF  + 
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEML 239

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 248 KVVELLHRMDERN 260
           +  +L+  M  + 
Sbjct: 300 QAHDLIDEMSMKG 312


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 138/236 (58%), Gaps = 1/236 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS++L ++I +G  P   +++ +I+GFC   ++D A +L   M   GC+ NV T+  LI 
Sbjct: 216 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   V E+  L  +M+  G  P VVTY+T+ +GL +  QV+ A +LF  M+  +   
Sbjct: 276 GLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 335

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              T+N  IDGLCK   I EA +L+  +R   C   I  Y+ LIDGLCK  +++ A++LF
Sbjct: 336 NVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLF 395

Query: 184 QSLPRVGL-MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           Q++P  G+   N VTY+ + HG+   G+M  A  +F  +  KG +P+  T+ +L+L
Sbjct: 396 QTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 451



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 143/264 (54%), Gaps = 9/264 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LL++MI++G  PN F ++ LI G C    +  A++L   M + GC  NVVTY+T
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   V+++  L+  M  +   P VVT+N L  GL +  ++E A +L+  M+ + 
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-----YSCLIDGLCKIGK 175
            A +  TYN+ IDGLCK+  + EA +LF+T+     E G+ A     YS L  G   +G+
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP----ESGVSAANAVTYSTLFHGYAALGR 423

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +  A  +F  L   G  P++ TY  +I  +C   +  +  +L  +M +KG  P   T + 
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           ++ G    N T + ++L   M  R
Sbjct: 484 VLGGLFEGNHTERAIQLFDSMAAR 507



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 137/258 (53%), Gaps = 1/258 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  +L  M+ +G  P+   +STLIDG C  G  ++A  +   +   G  ++   + T+
Sbjct: 143 DEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETI 202

Query: 62  INGYC-KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           I   C K   VE +  +   +++KG  PTV+ +N + +G  +   ++ A KL + M    
Sbjct: 203 IQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKG 262

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+   I GLCK   + EA +L   + +  C   +  YS +I+GLCK G+++ A+
Sbjct: 263 CVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAY 322

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELFQ + R    PNVVT+NI+I G C   ++++A  L+  M   G AP+ +T+N+L+ G 
Sbjct: 323 ELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGL 382

Query: 241 IRNNETSKVVELLHRMDE 258
            ++ +  +  +L   + E
Sbjct: 383 CKSFQVDEAFQLFQTIPE 400



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +LL+ M+  G  PN   YST+I+G C  G++D A ELF  M+   C  NVVT+N LI
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 344

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV- 121
           +G CK K +EE+  LY  M   G  P ++TYN+L  GL +  QV+ A +LF  +  S V 
Sbjct: 345 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 404

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           AA   TY+T   G    G + +A  +F  L        +  Y+ LI   CK  +     E
Sbjct: 405 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 464

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G  P V T + ++ G       ++A  LF  M A+G   + + +N ++ G  
Sbjct: 465 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 524

Query: 242 RNNETSKVVELLHR-MDERN 260
           R ++  K + +L + +D+R+
Sbjct: 525 RASKHDKALAVLEQVIDKRD 544



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LL+ M   G   NA V++TL+ G C  G +  A E F +M    C  +V+TY  
Sbjct: 73  LDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTA 131

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK    +E+  +  EM+++G  P  VT++TL  GL +    E A ++ +++    
Sbjct: 132 LVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 191

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC-ELGIEAYSCLIDGLCKIGKLETA 179
           +    + + T I  LC     VE A     + + K     +  ++ +I+G CK   L++A
Sbjct: 192 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 251

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++L + +   G +PNV T+ I+I G C   ++ +A  L   M   G +PN VT++T++ G
Sbjct: 252 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVING 311

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +  +     EL   M+ RN
Sbjct: 312 LCKQGQVDDAYELFQLMERRN 332



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 127/258 (49%), Gaps = 8/258 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L    + R   PN F Y  LI GF   G++D A +L   M  +G   N V + TL+
Sbjct: 40  EALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLM 99

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C    V E+L  +  M +K   P V+TY  L H L +  + + A  +  EM     A
Sbjct: 100 KGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCA 158

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLR-VLKCELGIE--AYSCLIDGLC-KIGKLET 178
            +T T++T IDGLCK G   +A   FR L  V++  +G    A+  +I  LC K   +E 
Sbjct: 159 PDTVTFSTLIDGLCKFGSEEQA---FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 215

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A ++   +   G  P V+ +N++I+GFC    +D A+ L   M  KG  PN  TF  L+ 
Sbjct: 216 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275

Query: 239 GCIRNNETSKVVELLHRM 256
           G  + N   +  +LL +M
Sbjct: 276 GLCKANRVGEAQQLLEKM 293



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 4/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRP-NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA +L   + + GV   NA  YSTL  G+   G +  A  +F  +   G   ++ TY 
Sbjct: 388 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYT 447

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI  YCKT    E + L  EM SKG  P V T + +  GLFE +  E A++LFD M   
Sbjct: 448 SLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 507

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDGLCKIGKL 176
               +   YN  ++G+ +     +A  +   +   R  K      A   L++ LC++GK 
Sbjct: 508 GCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKT 567

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A +L   +   G    V +YN ++ G     + D+A  +F  M + G AP   T N +
Sbjct: 568 DDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVV 627

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           +       +     EL+ RM +
Sbjct: 628 ISWLCSAAKVDDAYELVQRMSK 649



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 3/229 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  +G  P     S ++ G       +RA +LF SM   GC  + + YN ++ G  +   
Sbjct: 469 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 528

Query: 71  VEESLNLYSEMLSKGIR---PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            +++L +  +++ K  R   P+    + L   L ++ + + A +L  +M     AA  S+
Sbjct: 529 HDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSS 588

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN  + GL +     EA ++F  +        I   + +I  LC   K++ A+EL Q + 
Sbjct: 589 YNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 648

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           ++G  P++ T N +I G+C  G+ D A  L  +M   G+ PN  T + L
Sbjct: 649 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 1/185 (0%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           HNV + N  ++  C+    +E+L L+   +++   P   TY  L  G      ++ A++L
Sbjct: 20  HNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQL 79

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
            +EM+ S        + T + GLC  G +VEA E FR +    C   +  Y+ L+  LCK
Sbjct: 80  LEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCK 138

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            GK + A  + + +   G  P+ VT++ +I G C  G  ++A  +  D+  +G+  +   
Sbjct: 139 AGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAA 198

Query: 233 FNTLM 237
           F T++
Sbjct: 199 FETII 203



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 3/203 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---ELFVSMDINGCMHNVVTY 58
           + A +L D M  RG   +A +Y+ +++G     + D+A    E  +         +    
Sbjct: 495 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAV 554

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           + L+   C+    +++  L  +M  +G    V +YN L  GL  + + + A ++F+ M  
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           +  A E ST N  I  LC    + +A EL + +  L C   IE  + LI G CK G+ + 
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADL 674

Query: 179 AWELFQSLPRVGLMPNVVTYNIM 201
           A +L + +   GL PN  T++++
Sbjct: 675 ARKLLEEMTEAGLEPNDTTHDLL 697



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           +C +D LC++ + + A  LF++      MPN  TY I+I GF + G +D A  L  +M++
Sbjct: 26  NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            G   N V   TLM G     +  +VVE L 
Sbjct: 86  SGFEGNAVVHTTLMKGLC---DAGRVVEALE 113



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 1/145 (0%)

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           LF +   S V     + N  +D LC+     EA  LFR      C      Y  LI G  
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             G L+ A +L + +   G   N V +  ++ G C+ G++ +A + F  M AK  AP+ +
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVM 127

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T+  L+    +  +  +   +L  M
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREM 152


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 142/257 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M+  G  PN F Y+++IDG+C  G +  A  +       G   +  TY +L+
Sbjct: 383 EAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 442

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C+  D ++++ ++ + L KG+RP+++ YNTL  GL +   +  AL+L +EM      
Sbjct: 443 NGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCK 502

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  I+GLCK G + +A  L        C   I  Y+ L+DG C+  KL++A EL
Sbjct: 503 PDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIEL 562

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ P+V+TYN +++G C   + ++  ++F  M  KG APN +T+NT++     
Sbjct: 563 VNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCN 622

Query: 243 NNETSKVVELLHRMDER 259
           + + ++ V+LL  M  +
Sbjct: 623 SKKVNEAVDLLGEMKSK 639



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL- 61
           E+ RL D +++RGV PN F ++  I G C  G +DRA  L   +   G   +VVTYNT+ 
Sbjct: 313 ESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVI 372

Query: 62  ----------------------------------INGYCKTKDVEESLNLYSEMLSKGIR 87
                                             I+GYCK   V ++  +  + + KG +
Sbjct: 373 CGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFK 432

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P   TY +L +G  +    + A+ +F +     +      YNT I GLC+ G I+ A +L
Sbjct: 433 PDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQL 492

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              +    C+  I  Y+ +I+GLCK+G L  A  L       G +P++ TYN ++ G+C 
Sbjct: 493 MNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCR 552

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             ++D A +L   M ++G+ P+ +T+NTL+ G  +  ++ +V+E+   M E+
Sbjct: 553 QLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEK 604



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 128/237 (54%), Gaps = 1/237 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  +    + +G+RP+  VY+TLI G C  G I  A +L   M   GC  ++ TYN +
Sbjct: 452 DQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 511

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING CK   + ++ +L  + ++KG  P + TYNTL  G     +++ A++L + M    +
Sbjct: 512 INGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 571

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYNT ++GLCK     E  E+F+ +    C   I  Y+ +I+ LC   K+  A +
Sbjct: 572 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVD 631

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLM 237
           L   +   GL P+VV++  +I GFC  G +D A+ LF  ME +  V+    T+N ++
Sbjct: 632 LLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIII 688



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 134/261 (51%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ L+   I +G  P+ F Y+TL+DG+C   ++D A EL   M   G   +V+TYNT
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNT 580

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CKT   EE + ++  M  KG  P ++TYNT+   L    +V  A+ L  EM+   
Sbjct: 581 LLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKG 640

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  +  ++ T I G CK G +  A  LFR + +          Y+ +I    +   ++ A
Sbjct: 641 LTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMA 700

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF  + + G  P+  TY ++I GFC  G +++ +   L+   KG  P+  TF  ++  
Sbjct: 701 LRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNC 760

Query: 240 CIRNNETSKVVELLHRMDERN 260
               ++  + V ++H M +++
Sbjct: 761 LCVEHKVQEAVGIIHLMVQKD 781



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 132/255 (51%), Gaps = 3/255 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L++ M  +G+ P+   Y+TL++G C T + +   E+F +M   GC  N++TYNT
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
           +I   C +K V E+++L  EM SKG+ P VV++ TL  G  ++  ++ A  LF  M+   
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 675

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           DV+  T+TYN  I    +   +  A  LF  ++   C+     Y  LIDG CK G +   
Sbjct: 676 DVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQG 735

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++        G +P++ T+  +++  C + ++ +A  +   M  K + P+  T NT+   
Sbjct: 736 YKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFEA 793

Query: 240 CIRNNETSKVVELLH 254
             + + T    E L+
Sbjct: 794 DKKGHITYHAYEFLY 808



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  L D M++  + P+   ++ L+   C  G +  +  LF  +   G   N+ T+N  
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G CK   ++ ++ L   +  +G+RP VVTYNT+  GL    +V  A +   +M +   
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFR-----------------------------TLR 152
                TYN+ IDG CK G +V+A  + +                              + 
Sbjct: 397 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMA 456

Query: 153 VLKCELG------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           V K  LG      I  Y+ LI GLC+ G +  A +L   +   G  P++ TYN++I+G C
Sbjct: 457 VFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLC 516

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G +  A+ L  D   KG  P+  T+NTL+ G  R  +    +EL++RM
Sbjct: 517 KMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRM 566



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 134/293 (45%), Gaps = 35/293 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A ++   M  + V  + + Y+  I  FC TG    A  L  +M + GC  N V Y T+
Sbjct: 207 NQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTV 266

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G+ +  D + +  L+ EML   + P V T+N L H L +   V  + +LFD++    V
Sbjct: 267 VTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGV 326

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELF-----------------------RTLRVLKCEL 158
                T+N FI GLCK G +  A  L                        R  RV++ E 
Sbjct: 327 CPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEE 386

Query: 159 --------GIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                   G E     Y+ +IDG CK G +  A  + +     G  P+  TY  +++GFC
Sbjct: 387 CLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFC 446

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            DG  D+A  +F D   KG+ P+ + +NTL+ G  +       ++L++ M E+
Sbjct: 447 QDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEK 499



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 15/249 (6%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING-------- 64
           ++G +   F Y +++      G+ +    L   M  N         NTL+ G        
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN-------LDNTLLEGVYVEAMRF 164

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           Y +   ++E+++ +  M      P+V +YN + + L E      A K++  M+   V ++
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             TY   I   C+ G    A  L R + VL C     AY  ++ G  + G  + A ELF 
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +    L P+V T+N ++H  C  G + ++  LF  +  +GV PN  TFN  + G  +  
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344

Query: 245 ETSKVVELL 253
              + V LL
Sbjct: 345 SLDRAVRLL 353



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A RL   M + G  P+ + Y  LIDGFC TG +++  +  +     G + ++ T+  
Sbjct: 697 MKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGR 756

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK-LFDEMQHS 119
           ++N  C    V+E++ +   M+ K I P  V  NT+F    + H   HA + L+D ++  
Sbjct: 757 VLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV--NTIFEADKKGHITYHAYEFLYDGVRDK 814

Query: 120 DV 121
            +
Sbjct: 815 KI 816



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 25/189 (13%)

Query: 83  SKGIRPTVVTYNTL-----FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL-- 135
            +G + T+ TY ++     FHG F            +EM++      ++  NT ++G+  
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKF------------NEMENLLSEMRSNLDNTLLEGVYV 159

Query: 136 ------CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
                  + G I EA + F  + +  C+  + +Y+ +++ L + G    A +++  +   
Sbjct: 160 EAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDK 219

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            +  +V TY I I  FC  G+   A  L  +M   G   N V + T++ G     +  + 
Sbjct: 220 KVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRA 279

Query: 250 VELLHRMDE 258
            EL   M E
Sbjct: 280 RELFDEMLE 288


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 149/292 (51%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M ++G +P+   Y+ LI+G C  G +D A +   +M + GC  NV+T+N ++
Sbjct: 262 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIIL 321

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVT------------------------------ 92
              C T    ++  L ++ML KG  P+VVT                              
Sbjct: 322 RSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCM 381

Query: 93  -----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                YN L HG  +  +++ A++  + M       +  TYNT +  LCK+G    A E+
Sbjct: 382 PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEI 441

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              L    C   +  Y+ +IDGL K+GK E A EL + + R GL P+++TY+ ++ G   
Sbjct: 442 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGC 501

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +G++D+A  +F DME   + P+ VT+N +MLG  +  +TS+ ++ L  M E+
Sbjct: 502 EGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 553



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 145/258 (56%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  + L+ MI +G  P+    ++LI GFC +G+  +A  +   ++ +G + +V+TYN 
Sbjct: 123 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNV 182

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK+ +++++L +   M    + P VVTYNT+   L +  +++ A+++ D     +
Sbjct: 183 LIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE 239

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   I+  C +  + +A +L   +R   C+  +  Y+ LI+G+CK G+L+ A 
Sbjct: 240 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 299

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +   ++P  G  PNV+T+NI++   C+ G+   A  L  DM  KG +P+ VTFN L+   
Sbjct: 300 KFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFL 359

Query: 241 IRNNETSKVVELLHRMDE 258
            R     + +++L +M +
Sbjct: 360 CRKRLLGRAIDVLEKMPK 377



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 145/292 (49%), Gaps = 38/292 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+R+++++   G  P+   Y+ LI G+C +GEID+A ++   M +     +VVTYNT++
Sbjct: 160 KATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTIL 216

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C +  ++E++ +    + +   P V+TY  L         V  A+KL DEM+     
Sbjct: 217 RSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCK 276

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK------- 175
            +  TYN  I+G+CK G + EA +    + +  C+  +  ++ ++  +C  G+       
Sbjct: 277 PDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERL 336

Query: 176 ----------------------------LETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                                       L  A ++ + +P+ G MPN ++YN ++HGFC 
Sbjct: 337 LADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQ 396

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + +MD+A +    M ++G  P+ VT+NTL+    ++ +    VE+L+++  +
Sbjct: 397 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 128/237 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RLL  M+++G  P+   ++ LI+  C    + RA ++   M  +GCM N ++YN L+
Sbjct: 332 DAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLL 391

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C+ K ++ ++     M+S+G  P +VTYNTL   L +  + + A+++ +++     +
Sbjct: 392 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCS 451

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G    AAEL   +R    +  I  YS L+ GL   GK++ A ++
Sbjct: 452 PVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKI 511

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F  +  + + P+ VTYN ++ G C   Q  +A D    M  KG  P   T+  L+ G
Sbjct: 512 FHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 110/207 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M + G  PN+  Y+ L+ GFC   ++DRA E    M   GC  ++VTYNT
Sbjct: 365 LGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 424

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK    + ++ + +++ SKG  P ++TYNT+  GL ++ + E+A +L +EM+   
Sbjct: 425 LLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKG 484

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T + GL   G + EA ++F  +  L  +     Y+ ++ GLCK  +   A 
Sbjct: 485 LKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI 544

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           +    +   G  P   TY I+I G  +
Sbjct: 545 DFLAYMVEKGCKPTKATYTILIEGIAD 571



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 3/190 (1%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  ++EE L     M+ +G  P V+   +L  G     +   A ++ + +++S    +  
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G CK+G I +A ++   + V      +  Y+ ++  LC  GKL+ A E+    
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERMSVAP---DVVTYNTILRSLCDSGKLKEAMEVLDRQ 235

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            +    P+V+TY I+I   CND  + +A  L  +M  KG  P+ VT+N L+ G  +    
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 247 SKVVELLHRM 256
            + ++ L+ M
Sbjct: 296 DEAIKFLNNM 305



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%)

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           L + G+LE   +  + +   G +P+V+    +I GFC  G+  KA  +   +E  G  P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMD 257
            +T+N L+ G  ++ E  K +++L RM 
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERMS 204


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 151/286 (52%), Gaps = 39/286 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK--- 67
           MI+R ++PN F ++ +I+  C TG++++AR++   M + G   NVV+YNTLI+GYCK   
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGG 273

Query: 68  -----------------------------------TKDVEESLNLYSEMLSKGIRPTVVT 92
                                                ++  SL ++ EML + + P V+T
Sbjct: 274 NGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           YN+L +GL    ++  A+ + D+M  + V     TY++ I+G CKNG + EA ++F +++
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK 393

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                     Y+ LID  CK+GK++  + L + + R G++P+V TYN +I G C +G ++
Sbjct: 394 GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            A  LF  +  KG+ P+ VTF+ LM G     E+ K   LL  M +
Sbjct: 454 AAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSK 498



 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 138/258 (53%), Gaps = 1/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +L  M++  V PN   ++ LIDGF     +  + ++F  M     + NV+TYN+
Sbjct: 277 MYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNS 336

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    + E++ +  +M+S G++P ++TY++L +G  +   ++ AL +FD ++   
Sbjct: 337 LINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQG 396

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T  YN  ID  CK G I +   L   +        +  Y+CLI GLC+ G +E A 
Sbjct: 397 TRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  L   GL P++VT++I++ G+C+ G+  KA  L  +M   G+ P  +T+N +M G 
Sbjct: 457 KLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGY 515

Query: 241 IRNNETSKVVELLHRMDE 258
            +         +  +M++
Sbjct: 516 CKEGNLKAATNMRTQMEK 533



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 137/255 (53%), Gaps = 2/255 (0%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++   M+ + V PN   Y++LI+G C  G+I+ A  +   M   G   N++TY++LING+
Sbjct: 317 KVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGF 376

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK   ++E+L+++  +  +G RPT   YN L     ++ +++    L +EM+   +  + 
Sbjct: 377 CKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN  I GLC+NG I  A +LF  L   K    +  +  L++G C  G+   A  L + 
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQL-TNKGLPDLVTFHILMEGYCSRGESRKAAMLLKE 495

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLMLGCIRNN 244
           + ++GL P  +TYNIM+ G+C +G +  A ++   ME  + +  N  ++N L+ G  +  
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 245 ETSKVVELLHRMDER 259
           +      LL+ M E+
Sbjct: 556 KLEDANMLLNEMLEK 570



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 125/234 (53%), Gaps = 2/234 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  + D M+  GV+PN   Y +LI+GFC  G +  A ++F S+   G       YN 
Sbjct: 347 INEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNM 406

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ YCK   +++   L  EM  +GI P V TYN L  GL     +E A KLFD++ +  
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T++  ++G C  G   +AA L + +  +  +     Y+ ++ G CK G L+ A 
Sbjct: 467 LP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAAT 525

Query: 181 ELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            +   + +   L  NV +YN+++ G+   G+++ A+ L  +M  KG+ PN +T+
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 106/190 (55%), Gaps = 6/190 (3%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           ++ DVE    LY EM+ + I+P V T+N + + L +  ++  A  + ++M+    +    
Sbjct: 203 RSADVEY---LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVV 259

Query: 127 TYNTFIDGLCK---NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +YNT IDG CK   NG + +A  + + +   +    +  ++ LIDG  K   L  + ++F
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVF 319

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    ++PNV+TYN +I+G CN G++++A  +   M + GV PN +T+++L+ G  +N
Sbjct: 320 KEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKN 379

Query: 244 NETSKVVELL 253
               + +++ 
Sbjct: 380 GMMKEALDMF 389



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 2/144 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +L D +  +G+ P+   +  L++G+C  GE  +A  L   M   G     +TYN 
Sbjct: 452 IEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 61  LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++ GYCK  +++ + N+ ++M   + +R  V +YN L  G  +  ++E A  L +EM   
Sbjct: 511 MMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

Query: 120 DVAAETSTYNTFIDGLCKNGYIVE 143
            +     TY    + +   G++ +
Sbjct: 571 GLVPNRITYEIVKEEMVDKGFVPD 594



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 42/209 (20%)

Query: 69  KDVEESLNLYSEMLSKGIRPTV-VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET-S 126
           KD+  +  L+ +++S  + P + + Y T    L +   +  +L+L  ++ HS   A+  S
Sbjct: 63  KDINPN-ELFRQLISSELNPDLCLRYYTW---LVKNRDISVSLELTFKLLHSLANAKRYS 118

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVL---------------------KCELGIEAY-- 163
              +F+DG  +NG   +   +F  + +                      + ELG EA+  
Sbjct: 119 KIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKR 178

Query: 164 -----------SC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                      SC  L+  L K  +      L++ + R  + PNV T+N++I+  C  G+
Sbjct: 179 SGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGK 238

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           M+KA D+  DM+  G +PN V++NTL+ G
Sbjct: 239 MNKARDVMEDMKVYGYSPNVVSYNTLIDG 267


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 138/257 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL    G RP    +++LIDG+CL G++D+A ++  +M++ G   ++VTYNTL+
Sbjct: 564 DAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY K   + + L L+ EM  KG++P  VTY  +  GLF   +   A K F EM  S   
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              S Y   + GLC+N    EA  LF+ L  +  +  I   + +I+ + K+ + E A EL
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PN  TY +MI     DG ++ A+++F  ME  G+ P     N ++   + 
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 243 NNETSKVVELLHRMDER 259
             E +K    L ++D +
Sbjct: 804 KGEIAKAGNYLSKVDGK 820



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 134/256 (52%), Gaps = 2/256 (0%)

Query: 7   LLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           LL +M ++G    P+   YST+I GF   GE  +A  LF  M   G   +VVTYN +I+ 
Sbjct: 250 LLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDA 309

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
            CK + ++++  +  +M + G +P  VTY+ + HG   + +++ A K+F EM+   +   
Sbjct: 310 LCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPN 369

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             T N+F+  LCK+G   EAAE F ++     +  I +Y  L+ G    G       LF 
Sbjct: 370 IVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFN 429

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           S+   G+  N   + I+IH +   G +D A  +F +M+ +GV+P+ VT++T++    R  
Sbjct: 430 SMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMG 489

Query: 245 ETSKVVELLHRMDERN 260
             +  +E  ++M  R 
Sbjct: 490 RLTDAMEKFNQMVARG 505



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 71/331 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L  M   G +P+   YS +I G+   G +  A ++F  M   G + N+VT N+
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNS 375

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH------------GLFE------ 102
            +   CK    +E+   +  M +KG +P + +Y TL H            GLF       
Sbjct: 376 FLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNG 435

Query: 103 -----------IHQ------VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                      IH       V+ A+ +F EMQ   V+ +  TY+T I    + G + +A 
Sbjct: 436 IAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAM 495

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF-----QSLPR------------ 188
           E F  +     +     YS +I G C  G L  A EL      + +PR            
Sbjct: 496 EKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINS 555

Query: 189 -------------------VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
                              +G  P V+T+N +I G+C  G+MDKA  +   ME  GV P+
Sbjct: 556 LCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPD 615

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            VT+NTL+ G  +N   +  + L   M  + 
Sbjct: 616 IVTYNTLLDGYFKNGRINDGLTLFREMQRKG 646



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 128/261 (49%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M Q+GV P+   YST+I  F   G +  A E F  M   G   N   Y++
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSS 515

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +I G+C    + ++  L SEM++KGI RP +V ++++ + L +  +V  A  +FD     
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDI 575

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  T+N+ IDG C  G + +A ++   + V+  E  I  Y+ L+DG  K G++   
Sbjct: 576 GERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDG 635

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+ + R G+ PN VTY IM+ G    G+   A   F +M   G       +  ++ G
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGG 695

Query: 240 CIRNNETSKVVELLHRMDERN 260
             RNN   + + L  ++   N
Sbjct: 696 LCRNNCADEAIILFQKLGTMN 716



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 124/254 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M ++GV+P+   Y+ +ID  C    +D+A  +   M  +G   + VTY+ +I
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMI 342

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY     ++E+  ++ EM  +G+ P +VT N+    L +  + + A + FD M      
Sbjct: 343 HGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHK 402

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y T + G    G   +   LF +++          ++ LI    K G ++ A  +
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLI 462

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + + G+ P+VVTY+ +I  F   G++  A + F  M A+G+ PN   +++++ G   
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCM 522

Query: 243 NNETSKVVELLHRM 256
           +    K  EL+  M
Sbjct: 523 HGGLVKAKELVSEM 536



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 38/260 (14%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P    Y+ L+D  C     D    LF  +   G   + +T NTL+   C     EE++N+
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 78  ----------------YS-------------------EMLSK---GIRPTVVTYNTLFHG 99
                           YS                   +M++K      P VV Y+T+ HG
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 100 LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
            F   +   A  LF EM    V  +  TYN  ID LCK   + +A  + R +     +  
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
              YSC+I G   +G+L+ A ++F+ + + GL+PN+VT N  +   C  G+  +A + F 
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394

Query: 220 DMEAKGVAPNCVTFNTLMLG 239
            M AKG  P+  ++ TL+ G
Sbjct: 395 SMTAKGHKPDIFSYCTLLHG 414



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 3/207 (1%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK-LFDE 115
           TYN L++  C+ +  +  L L+  +L  G++   +T NTL   L   ++ E A+  L   
Sbjct: 159 TYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHR 218

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKI 173
           M          +Y+  +  LC N     A +L + +  +   C   + AYS +I G    
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNE 278

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G+   A  LF  + R G+ P+VVTYN++I   C    MDKA  +   M   G  P+ VT+
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTY 338

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           + ++ G        +  ++   M +R 
Sbjct: 339 SCMIHGYATLGRLKEAAKMFREMKKRG 365



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 8/160 (5%)

Query: 109 ALKLFDEMQHSDVAAETS-----TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           AL LF+ +   +   + +     TYN  +D  C+         LF  +     ++     
Sbjct: 136 ALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITA 195

Query: 164 SCLIDGLCKIGKLETAWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           + L+  LC   + E A   L   +  +G +PN V+Y+I++   C++    +A DL   M 
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255

Query: 223 AKGVA--PNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +G A  P+ V ++T++ G     ET K   L H M  + 
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQG 295


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M +  + P+ F YS LI G C  G +D A +LF  M   G   N +T+  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+++ ++ ++N Y +ML+ G++P +V YNTL +GL ++  V  A KL DEM+   
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E+ + +      L   A++ LI G C+ G++  A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + +   G+ P+  TY ++I G+C  G +     L  +M+  G  P  +T+N LM G 
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL  M
Sbjct: 514 CKQGQMKNANMLLEAM 529



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 128/248 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G  P    Y+ LI+ FC  G I  A+ +F  +   G     V++NTLING CK+++
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L   M    I P V TY+ L HGL +  +++ A +LFDEMQ   +     T+  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG C++  I  A   +  +  +  +  +  Y+ L++GLCK+G +  A +L   +  VG
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+ +TY  +I G+C +G ++ A ++   M  +GV  + V F  L+ G  R+       
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 251 ELLHRMDE 258
             L  M E
Sbjct: 454 RTLREMVE 461



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 134/254 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + + + +RG+RP    ++TLI+G C +  +D    L  +M+ N    +V TY+ LI
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   ++ +  L+ EM  +G+RP  +T+  L  G     +++ A+  + +M    V 
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVK 360

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YNT ++GLCK G + +A +L   +R++  +     Y+ LIDG CK G LE+A E+
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G++ + V +  +I GFC DG++  A     +M   G+ P+  T+  ++ G  +
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 243 NNETSKVVELLHRM 256
                   +LL  M
Sbjct: 481 KGNVKMGFKLLKEM 494



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 131/237 (55%), Gaps = 3/237 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A      M+  GV+P+  +Y+TL++G C  G++++AR+L   M + G   + +TY T
Sbjct: 344 IDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTT 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  D+E ++ +   M  +G+    V +  L  G     +V  A +   EM  + 
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  + +TY   IDG CK G +    +L + +++   + G+  Y+ L++GLCK G+++ A 
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAN 523

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L +++  +G+ P+ +TYNI++ G C +G   KA DL      KG+  +   + +L+
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLV 577



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 14/260 (5%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF-------VSMDINGCMHNVV 56
           AS    ++   G R + FV+  L+  +  +G +  A + F         +  +GC +   
Sbjct: 137 ASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGY--- 193

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
               L++    +         YSE+L  G  P V  YN L +   +   +  A  +F+E+
Sbjct: 194 ----LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEI 249

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +   +   T ++NT I+GLCK+  + E   L +T+   +    +  YS LI GLCK G+L
Sbjct: 250 RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRL 309

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A +LF  + + GL PN +T+  +I G C   ++D A + +  M   GV P+ V +NTL
Sbjct: 310 DVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTL 369

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G  +  + +K  +L+  M
Sbjct: 370 LNGLCKVGDVNKARKLVDEM 389



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 59/121 (48%)

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           +G++ +A + FR +R    ++       L+D +       T W  +  +   G  P V  
Sbjct: 166 SGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQY 225

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YNI+I+ FC +G +  A  +F ++  +G+ P  V+FNTL+ G  ++    +   L   M+
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 258 E 258
           E
Sbjct: 286 E 286



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/233 (19%), Positives = 94/233 (40%), Gaps = 36/233 (15%)

Query: 60  TLINGYCKTKDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           ++I      K  + + ++++ +L + G R +   ++ L    ++   V  A++ F  +++
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S+           +D +  +   V     +  +        ++ Y+ LI+  CK G +  
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241

Query: 179 AWELFQSLPRVGLMPNVVTYNIM-----------------------------------IH 203
           A  +F  + + GL P  V++N +                                   IH
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIH 301

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G C +G++D A  LF +M+ +G+ PN +TF  L+ G  R+      +   H+M
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM 354


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 146/289 (50%), Gaps = 35/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M  +G +P+   Y+ LI+G C  G +D A +   +M   GC  NV+T+N ++
Sbjct: 269 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 328

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVT------------------------------ 92
              C T    ++  L S+ML KG  P+VVT                              
Sbjct: 329 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 388

Query: 93  -----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                YN L HG  +  +++ A++  D M       +  TYNT +  LCK+G +  A E+
Sbjct: 389 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 448

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              L    C   +  Y+ +IDGL K+GK E A +L   + R GL P+++TY+ ++ G   
Sbjct: 449 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 508

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +G++D+A   F D+E  G+ PN +T+N++MLG  ++ +T + ++ L  M
Sbjct: 509 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 557



 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 142/256 (55%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++  + L+ M+ RG  P+    ++LI GFC  G+  +A  +   ++ +G + +V+TYN 
Sbjct: 130 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 189

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK+ +++ +L +   M    + P VVTYNT+   L +  +++ A+++ D     +
Sbjct: 190 LISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 246

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   I+  CK   + +A +L   +R    +  +  Y+ LI+G+CK G+L+ A 
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 306

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +   ++P  G  PNV+T+NI++   C+ G+   A  L  DM  KG +P+ VTFN L+   
Sbjct: 307 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 366

Query: 241 IRNNETSKVVELLHRM 256
            R     + +++L +M
Sbjct: 367 CRQGLLGRAIDILEKM 382



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 139/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  M+++G  P+   ++ LI+  C  G + RA ++   M ++GC  N ++YN L+
Sbjct: 339 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 398

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K ++ ++     M+S+G  P +VTYNTL   L +  +V+ A+++ +++     +
Sbjct: 399 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 458

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G    A +L   +R    +  I  YS L+ GL + GK++ A + 
Sbjct: 459 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 518

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  L  +G+ PN +TYN ++ G C   Q D+A D    M +K   P   T+  L+ G   
Sbjct: 519 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 578

Query: 243 NNETSKVVELLHRMDER 259
                + ++LL+ +  R
Sbjct: 579 EGLAKEALDLLNELCSR 595



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 145/289 (50%), Gaps = 32/289 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-------------- 48
           +A+ +++++ Q G  P+   Y+ LI G+C +GEID A ++   M++              
Sbjct: 167 KATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTL 226

Query: 49  ------------------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                               C  +V+TY  LI   CK   V +++ L  EM +KG +P V
Sbjct: 227 CDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDV 286

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           VTYN L +G+ +  +++ A+K  + M          T+N  +  +C  G  ++A +L   
Sbjct: 287 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 346

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C   +  ++ LI+ LC+ G L  A ++ + +P  G  PN ++YN ++HGFC + +
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           MD+A +    M ++G  P+ VT+NTL+    ++ +    VE+L+++  +
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 455



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +LD  +Q+   P+   Y+ LI+  C    + +A +L   M   G   +VVTYN 
Sbjct: 232 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++E++   + M S G +P V+T+N +   +    +   A KL  +M    
Sbjct: 292 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    T+N  I+ LC+ G +  A ++   + +  C     +Y+ L+ G CK  K++ A 
Sbjct: 352 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 411

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G  P++VTYN ++   C DG++D A ++   + +KG +P  +T+NT++ G 
Sbjct: 412 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 471

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +T + ++LL  M  +
Sbjct: 472 SKVGKTERAIKLLDEMRRK 490



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 120/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M   G  PN+  Y+ L+ GFC   ++DRA E    M   GC  ++VTYNT
Sbjct: 372 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 431

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK   V+ ++ + +++ SKG  P ++TYNT+  GL ++ + E A+KL DEM+   
Sbjct: 432 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 491

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ + GL + G + EA + F  L  L        Y+ ++ GLCK  + + A 
Sbjct: 492 LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAI 551

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +    +      P   TY I+I G   +G   +A DL  ++ ++G+
Sbjct: 552 DFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 102/192 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A   LD+M+ RG  P+   Y+TL+   C  G++D A E+   +   GC   ++TYNT
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K    E ++ L  EM  KG++P ++TY++L  GL    +V+ A+K F +++   
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ + GLCK+     A +    +   +C+     Y+ LI+G+   G  + A 
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586

Query: 181 ELFQSLPRVGLM 192
           +L   L   GL+
Sbjct: 587 DLLNELCSRGLV 598



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 3/190 (1%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  ++E+       M+ +G  P ++   +L  G   I + + A  + + ++ S    +  
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G CK+G I  A ++   + V      +  Y+ ++  LC  GKL+ A E+    
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMNVAP---DVVTYNTILRTLCDSGKLKQAMEVLDRQ 242

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            +    P+V+TY I+I   C +  + +A  L  +M  KG  P+ VT+N L+ G  +    
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 247 SKVVELLHRM 256
            + ++ L+ M
Sbjct: 303 DEAIKFLNNM 312



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 49/88 (55%)

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           L + G+LE  ++  +S+   G +P+++    +I GFC  G+  KA  +   +E  G  P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMD 257
            +T+N L+ G  ++ E    +++L RM+
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRMN 211


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 146/258 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  + DLM++  V+ +   Y+TLIDG+CL G++D A +L   M ++G   N VTYNT+I
Sbjct: 469 RAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTII 528

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++ +L+ +M SKG+ P +V Y+T+ HGLF+  ++  A +L+  M    + 
Sbjct: 529 NGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIK 588

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  + GLC+N    +A  +F  L ++   L    ++ +ID L K G+ + A +L
Sbjct: 589 LPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDL 648

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F SL   GL+PNVVTY +M+      G +++  DLFL +E  G   +    N L+    +
Sbjct: 649 FASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQ 708

Query: 243 NNETSKVVELLHRMDERN 260
             E  K    L ++DE N
Sbjct: 709 KGEVRKAGVYLSKIDENN 726



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 139/247 (56%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +LLD+M++ G +P+ ++++ LI  +   G +D A   F  M   G   N+VTY T+++  
Sbjct: 332 QLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDAL 391

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C+   V+++++ +  ++S+G+ P  V + TL HGL    + + A +L  EM    +   T
Sbjct: 392 CRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNT 451

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             +NT ++ LCK G +  A  +F  +  +  +  +  Y+ LIDG C  GK++ A +L + 
Sbjct: 452 IFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEG 511

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G+ PN VTYN +I+G+C +G+++ A  LF  M +KGV P  V ++T++ G  +   
Sbjct: 512 MVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRR 571

Query: 246 TSKVVEL 252
            +   EL
Sbjct: 572 IAAAKEL 578



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 124/243 (51%), Gaps = 12/243 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L D M+ +G+ PN   Y+ L+ G+C +G+   A  +F  M  +G   +VVTYNT
Sbjct: 222 LDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNT 281

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------LFEIHQVEHALKLFD 114
           L+   CK     E+  ++  M+ KG +P    Y TL HG      L ++HQ      L D
Sbjct: 282 LMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ------LLD 335

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            M  +    +   +N  I    K+G + EA   F  +R       I  Y  ++D LC++G
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           K++ A   F  L   GL PN V +  +IHG C   + DKA +L ++M  +G+ PN + FN
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFN 455

Query: 235 TLM 237
           TL+
Sbjct: 456 TLL 458



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA      M Q+G+ PN   Y T++D  C  G++D A   F  +   G   N V + T
Sbjct: 362 VDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRT 421

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C     +++  L  EM+ +GI P  + +NTL + L +   V  A  +FD M   D
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY T IDG C +G + EA +L   + +   +     Y+ +I+G CK G++E A 
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDAC 541

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ P +V Y+ ++HG     ++  A +L+L M   G+     T+N ++ G 
Sbjct: 542 SLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGL 601

Query: 241 IRNNETSKVVELLHRM 256
            +NN T   + + H +
Sbjct: 602 CQNNCTDDALRMFHNL 617



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 128/238 (53%), Gaps = 4/238 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   MI RG+ PN   ++TL++  C  G + RA+ +F  M       +V+TY TL
Sbjct: 433 DKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTL 492

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    V+E+  L   M+  G++P  VTYNT+ +G  +  ++E A  LF +M    V
Sbjct: 493 IDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGV 552

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC--ELGIEAYSCLIDGLCKIGKLETA 179
                 Y+T + GL +   I  A EL+  L ++KC  +L I  Y+ ++ GLC+    + A
Sbjct: 553 NPGIVIYSTILHGLFQTRRIAAAKELY--LWMIKCGIKLPIGTYNIILQGLCQNNCTDDA 610

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +F +L  +       T+NIMI      G+ D+A DLF  + A+G+ PN VT+  +M
Sbjct: 611 LRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMM 668



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 118/246 (47%), Gaps = 13/246 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYN 59
           +D A   L  +I+ G    A  +S L+ G C       A ++ +  M   GC  N  +YN
Sbjct: 112 LDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYN 171

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIR----PTVVTYNTLFHGLFEIHQVEHALKLFDE 115
            L+ G C     +++L+L   M++   R    P VV+Y T+ +GL    Q++ A  LFDE
Sbjct: 172 ILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDE 231

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLC 171
           M    ++    TYN  + G C +G   EA  +FR +    C  G+E     Y+ L+  LC
Sbjct: 232 MLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKM----CRDGVEPDVVTYNTLMVYLC 287

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G+   A ++F S+ + G  P+   Y  ++HG+  +G + + H L   M   G  P+  
Sbjct: 288 KNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHY 347

Query: 232 TFNTLM 237
            FN L+
Sbjct: 348 IFNILI 353



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 5/234 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +  R  R +   YS +I      G +D A      +   G     +T++ L+ G C  K 
Sbjct: 87  LFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKR 146

Query: 71  VEESLNL-YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV----AAET 125
             +++++    M + G  P   +YN L  GL + ++ + AL L   M   D       + 
Sbjct: 147 TSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDV 206

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            +Y T I+GL + G + +A  LF  +           Y+CL+ G C  GK + A  +F+ 
Sbjct: 207 VSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRK 266

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + R G+ P+VVTYN ++   C +G+  +A  +F  M  KG  P+   + TL+ G
Sbjct: 267 MCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 5/191 (2%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             ES  +   + ++  R  + TY+ +         ++ A      +  +   A+  T++ 
Sbjct: 77  ARESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSP 136

Query: 131 FIDGLCKNGYIVEAAEL-FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL--- 186
            + GLC +    +A ++  R +  L C     +Y+ L+ GLC   + + A  L  ++   
Sbjct: 137 LLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMAD 196

Query: 187 -PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
             R G  P+VV+Y  +I+G   +GQ+DKA+ LF +M  +G++PNC+T+N L+ G   + +
Sbjct: 197 DTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGK 256

Query: 246 TSKVVELLHRM 256
             + + +  +M
Sbjct: 257 PKEAIGIFRKM 267


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 136/254 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++L+ MI+R   PN   Y+T+I   C   +++ A +L + +   G + +V TYN+
Sbjct: 352 VDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNS 411

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C +++   ++ LY EM +KG  P   TYN L   L    +++ AL L  EM+ S 
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A    TYNT IDG CKN  I EA E+F  + +         Y+ LIDGLCK  ++E A 
Sbjct: 472 CARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEAS 531

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL P+  TYN ++  FC  G + KA D+   M + G  P+ VT+ TL+ G 
Sbjct: 532 QLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGL 591

Query: 241 IRNNETSKVVELLH 254
            +        +LL 
Sbjct: 592 CKAGRVEAATKLLR 605



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 137/257 (53%), Gaps = 1/257 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M  +G  P+ F Y+ LID  C  G++  A  L   M+++GC  NV+TYNTLI+
Sbjct: 425 AMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLID 484

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K + E+  ++ +M  +G+    VTYNTL  GL +  +VE A +L D+M    +  
Sbjct: 485 GFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRP 544

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ +   CK G I +AA++ +T+    CE  I  Y  LI GLCK G++E A +L 
Sbjct: 545 DKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLL 604

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           +++   G+      YN +I       +  +A  LF +M  K  AP+ VT+  +  G C  
Sbjct: 605 RTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQG 664

Query: 243 NNETSKVVELLHRMDER 259
                + V+ +  M ER
Sbjct: 665 GGPIGEAVDFVMEMLER 681



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 146/257 (56%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLM-IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           ++EA R ++ M ++ G  P+ + ++ L++G   TG +  A E+   M   G   ++ TYN
Sbjct: 281 IEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYN 340

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI+G CK  +V+E++ + ++M+ +   P  VTYNT+   L + +QVE A KL   +   
Sbjct: 341 SLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGK 400

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TYN+ I GLC +     A EL++ ++   C      Y+ LID LC  GKL+ A
Sbjct: 401 GILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEA 460

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L + +   G   NV+TYN +I GFC + ++ +A ++F  ME +GV+ N VT+NTL+ G
Sbjct: 461 LNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDG 520

Query: 240 CIRNNETSKVVELLHRM 256
             ++    +  +L+ +M
Sbjct: 521 LCKSERVEEASQLMDQM 537



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 130/260 (50%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M   G   N   Y+TLIDGFC    I  A E+F  M++ G   N VTYNT
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK++ VEE+  L  +M+ +G+RP   TYN+L     +   ++ A  +   M    
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I GLCK G +  A +L RT+++    L   AY+ +I  L +  + + A 
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAV 636

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +      P+ VTY I+  G C   G + +A D  ++M  +G  P   +F  L  G
Sbjct: 637 RLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEG 696

Query: 240 CIRNNETSKVVELLHRMDER 259
                    +++L+  + E+
Sbjct: 697 LFSLAMVGTLIKLIDMVMEK 716



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 135/258 (52%), Gaps = 1/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYN 59
           +D A R+ + M++ G        + L++GFC  G I+ A      M +  G   +  T+N
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFN 305

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            L+NG  KT  V+ +L +   ML +G  P + TYN+L  GL ++ +V+ A+K+ ++M   
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           D +  T TYNT I  LCK   + EA +L   L        +  Y+ LI GLC       A
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVA 425

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL++ +   G  P+  TYN++I   C  G++ +A +L  +ME  G A N +T+NTL+ G
Sbjct: 426 MELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDG 485

Query: 240 CIRNNETSKVVELLHRMD 257
             +N   ++  E+  +M+
Sbjct: 486 FCKNKRIAEAEEIFDQME 503



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 1/252 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L++ M   G+ P+   ++T++ GF   G +D A  +   M   GC+   VT N L+NG+C
Sbjct: 217 LMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFC 276

Query: 67  KTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           K   +EE+L    EM L +G  P   T+N L +GL +   V+HAL++ D M       + 
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI 336

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN+ I GLCK G + EA ++   +    C      Y+ +I  LCK  ++E A +L   
Sbjct: 337 YTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALV 396

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           L   G++P+V TYN +I G C       A +L+ +M+ KG  P+  T+N L+       +
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456

Query: 246 TSKVVELLHRMD 257
             + + LL  M+
Sbjct: 457 LQEALNLLKEME 468



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 1/212 (0%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G + N   YN L+N       ++     +S M+S+GIRP V T+N L   L   HQ+  A
Sbjct: 155 GVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPA 214

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + L +EM+   +  +  T+ T + G  + G +  A  +   +    C +     + L++G
Sbjct: 215 ILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNG 274

Query: 170 LCKIGKLETAWELFQSLP-RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
            CK G++E A    + +  R G  P+  T+N++++G    G +  A ++   M  +G  P
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +  T+N+L+ G  +  E  + V++L++M ER+
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERD 366


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 146/289 (50%), Gaps = 35/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M  +G +P+   Y+ LI+G C  G +D A +   +M   GC  NV+T+N ++
Sbjct: 212 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 271

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVT------------------------------ 92
              C T    ++  L S+ML KG  P+VVT                              
Sbjct: 272 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 331

Query: 93  -----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                YN L HG  +  +++ A++  D M       +  TYNT +  LCK+G +  A E+
Sbjct: 332 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 391

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              L    C   +  Y+ +IDGL K+GK E A +L   + R GL P+++TY+ ++ G   
Sbjct: 392 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 451

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +G++D+A   F D+E  G+ PN +T+N++MLG  ++ +T + ++ L  M
Sbjct: 452 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 500



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 142/256 (55%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++  + L+ M+ RG  P+    ++LI GFC  G+  +A  +   ++ +G + +V+TYN 
Sbjct: 73  LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 132

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK+ +++ +L +   M    + P VVTYNT+   L +  +++ A+++ D     +
Sbjct: 133 LISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 189

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   I+  CK   + +A +L   +R    +  +  Y+ LI+G+CK G+L+ A 
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 249

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +   ++P  G  PNV+T+NI++   C+ G+   A  L  DM  KG +P+ VTFN L+   
Sbjct: 250 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 309

Query: 241 IRNNETSKVVELLHRM 256
            R     + +++L +M
Sbjct: 310 CRQGLLGRAIDILEKM 325



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 139/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  M+++G  P+   ++ LI+  C  G + RA ++   M ++GC  N ++YN L+
Sbjct: 282 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 341

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K ++ ++     M+S+G  P +VTYNTL   L +  +V+ A+++ +++     +
Sbjct: 342 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 401

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G    A +L   +R    +  I  YS L+ GL + GK++ A + 
Sbjct: 402 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 461

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  L  +G+ PN +TYN ++ G C   Q D+A D    M +K   P   T+  L+ G   
Sbjct: 462 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 521

Query: 243 NNETSKVVELLHRMDER 259
                + ++LL+ +  R
Sbjct: 522 EGLAKEALDLLNELCSR 538



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 145/289 (50%), Gaps = 32/289 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-------------- 48
           +A+ +++++ Q G  P+   Y+ LI G+C +GEID A ++   M++              
Sbjct: 110 KATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTL 169

Query: 49  ------------------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                               C  +V+TY  LI   CK   V +++ L  EM +KG +P V
Sbjct: 170 CDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDV 229

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           VTYN L +G+ +  +++ A+K  + M          T+N  +  +C  G  ++A +L   
Sbjct: 230 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 289

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C   +  ++ LI+ LC+ G L  A ++ + +P  G  PN ++YN ++HGFC + +
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           MD+A +    M ++G  P+ VT+NTL+    ++ +    VE+L+++  +
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 398



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +LD  +Q+   P+   Y+ LI+  C    + +A +L   M   G   +VVTYN 
Sbjct: 175 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 234

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++E++   + M S G +P V+T+N +   +    +   A KL  +M    
Sbjct: 235 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    T+N  I+ LC+ G +  A ++   + +  C     +Y+ L+ G CK  K++ A 
Sbjct: 295 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 354

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G  P++VTYN ++   C DG++D A ++   + +KG +P  +T+NT++ G 
Sbjct: 355 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 414

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +T + ++LL  M  +
Sbjct: 415 SKVGKTERAIKLLDEMRRK 433



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 120/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M   G  PN+  Y+ L+ GFC   ++DRA E    M   GC  ++VTYNT
Sbjct: 315 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 374

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK   V+ ++ + +++ SKG  P ++TYNT+  GL ++ + E A+KL DEM+   
Sbjct: 375 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ + GL + G + EA + F  L  L        Y+ ++ GLCK  + + A 
Sbjct: 435 LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAI 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +    +      P   TY I+I G   +G   +A DL  ++ ++G+
Sbjct: 495 DFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 102/192 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A   LD+M+ RG  P+   Y+TL+   C  G++D A E+   +   GC   ++TYNT
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K    E ++ L  EM  KG++P ++TY++L  GL    +V+ A+K F +++   
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ + GLCK+     A +    +   +C+     Y+ LI+G+   G  + A 
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529

Query: 181 ELFQSLPRVGLM 192
           +L   L   GL+
Sbjct: 530 DLLNELCSRGLV 541



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 3/190 (1%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  ++E+       M+ +G  P ++   +L  G   I + + A  + + ++ S    +  
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G CK+G I  A ++   + V      +  Y+ ++  LC  GKL+ A E+    
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMNVAP---DVVTYNTILRTLCDSGKLKQAMEVLDRQ 185

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            +    P+V+TY I+I   C +  + +A  L  +M  KG  P+ VT+N L+ G  +    
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 247 SKVVELLHRM 256
            + ++ L+ M
Sbjct: 246 DEAIKFLNNM 255



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 49/88 (55%)

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           L + G+LE  ++  +S+   G +P+++    +I GFC  G+  KA  +   +E  G  P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMD 257
            +T+N L+ G  ++ E    +++L RM+
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRMN 154


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 140/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL+   G RP+   +++LIDG+CL G++D+A ++  +M++ G   ++VTY+TL+
Sbjct: 564 DAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY K   + + L L+ EM  KG++P  VTY  +  GLF   +   A K F EM  S   
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              S Y   + GLC+N    EA  LF+ L  +  +  I   + +I+ + K+ + E A EL
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PN  TY +MI     DG ++ A+++F  ME  G+ P     N ++   + 
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 243 NNETSKVVELLHRMDER 259
             E +K    L ++D +
Sbjct: 804 KGEIAKAGNYLSKVDGK 820



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 133/255 (52%), Gaps = 2/255 (0%)

Query: 7   LLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           L  +M + G    PN   Y+T+I GF   GE  +A  LF  M   G   +VVTYN +I+ 
Sbjct: 250 LFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDA 309

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
            CK + ++++  +  +M + G +P  VTYN + HG   + +++ A K+F +M+   +   
Sbjct: 310 LCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPN 369

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
               N+F+  LCK+G   EAAE+F ++     +  I +Y  L+ G    G       LF 
Sbjct: 370 IVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFN 429

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           S+   G+  +   +NI+IH +   G +D A  +F +M+ +GV+P+ VT++T++    R  
Sbjct: 430 SMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMG 489

Query: 245 ETSKVVELLHRMDER 259
             +  +E  ++M  R
Sbjct: 490 RLTDAMEKFNQMVAR 504



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 124/233 (53%), Gaps = 2/233 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTYNTLING 64
           LL  M + G  PN F YS ++ G C      RA +LF  M   G  C  NVV YNT+I+G
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           + K  +  ++ +L+ EM  +G++P VVTYN +   L +   ++ A  +  +M  +    +
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           T TYN  I G    G + EAA++FR ++       I   +  +  LCK G+ + A E+F 
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           S+   G  P++V+Y  ++HG+ ++G       LF  M++ G+A +C  FN L+
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILI 447



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M Q+GV P+   YST+I  F   G +  A E F  M   G   N   Y++
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHS 515

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +I G+C    + ++  L SEM++KGI RP +V +N++ + L +  +V  A  +FD +   
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI 575

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+ + IDG C  G + +A ++   + V+  E  I  YS L+DG  K G++   
Sbjct: 576 GERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDG 635

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+ + R G+ PN VTY IM+ G    G+   A   F +M   G       +  ++ G
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGG 695

Query: 240 CIRNNETSKVVELLHRMDERN 260
             RNN   + + L  ++   N
Sbjct: 696 LCRNNCADEAIILFQKLGTMN 716



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L  M   G +P+   Y+ +I G+   G +  A ++F  M   G + N+V  N+
Sbjct: 316 MDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNS 375

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +   CK    +E+  ++  M +KG +P +V+Y TL HG          + LF+ M+ + 
Sbjct: 376 FLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +AA+   +N  I    K G + +A  +F  ++       +  YS +I    ++G+L  A 
Sbjct: 436 IAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAM 495

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA-PNCVTFNTLM 237
           E F  +   G+ PN   Y+ +I GFC  G + KA +L  +M  KG+  P+ V FN+++
Sbjct: 496 EKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVI 553



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 126/254 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M ++GV+P+   Y+ +ID  C    +D+A  +   M  NG   + VTYN +I
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMI 342

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY     ++E+  ++ +M S+G+ P +V  N+    L +  + + A ++FD M      
Sbjct: 343 HGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHK 402

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y T + G    G+  +   LF +++          ++ LI    K G ++ A  +
Sbjct: 403 PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLI 462

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + + G+ P+VVTY+ +I  F   G++  A + F  M A+G+ PN   +++++ G   
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCM 522

Query: 243 NNETSKVVELLHRM 256
           +    K  EL+  M
Sbjct: 523 HGGLVKAKELVSEM 536



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 38/274 (13%)

Query: 23  YSTLID----------GFCLTGEI----------------------DRARE----LFVSM 46
           YS L+D          G  L G I                      +R  E    L   M
Sbjct: 160 YSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRM 219

Query: 47  DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG--IRPTVVTYNTLFHGLFEIH 104
              GC+ NV +Y+ ++ G C     + +L+L+  M  +G    P VV YNT+ HG F+  
Sbjct: 220 SELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEG 279

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +   A  LF EM    V  +  TYN  ID LCK   + +A  + R +     +     Y+
Sbjct: 280 ETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYN 339

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           C+I G   +G+L+ A ++F+ +   GL+PN+V  N  +   C  G+  +A ++F  M AK
Sbjct: 340 CMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAK 399

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G  P+ V++ TL+ G       + ++ L + M  
Sbjct: 400 GHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKS 433



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A ++LD M   GV  +   YSTL+DG+   G I+    LF  M   G   N VTY  
Sbjct: 597 MDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  +      +   + EM+  G   TV  Y  +  GL   +  + A+ LF ++   +
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMN 716

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    +  NT I+ + K     EA ELF T+           Y  +I  L K G +E A 
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDAN 776

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            +F S+ + G++P     N +I      G++ KA +    ++ K +
Sbjct: 777 NMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRI 822



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 3/208 (1%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK-LF 113
           V TY+ L++  C+ +  +  L L+  +L  G++   +T +TL   L   ++ E A+  L 
Sbjct: 157 VHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLL 216

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL--KCELGIEAYSCLIDGLC 171
             M          +Y+  + GLC N     A +LF+ +      C   + AY+ +I G  
Sbjct: 217 HRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFF 276

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G+   A  LF  + R G+ P+VVTYN++I   C    MDKA  +   M   G  P+ V
Sbjct: 277 KEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
           T+N ++ G        +  ++  +M  R
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSR 364



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 93/200 (46%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++GV+PN   Y  ++ G    G    AR+ F  M  +G    V  Y  ++ G C+   
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNC 701

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +E++ L+ ++ +  ++ ++   NT+ + ++++ + E A +LF  +  S +    STY  
Sbjct: 702 ADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGV 761

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I  L K+G + +A  +F ++       G    + +I  L + G++  A      +    
Sbjct: 762 MIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKR 821

Query: 191 LMPNVVTYNIMIHGFCNDGQ 210
           ++    T ++M+  F   G+
Sbjct: 822 ILLEASTTSLMLSLFSRKGK 841



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 79/204 (38%), Gaps = 51/204 (25%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCK----NGYIVEAAELFRTL--RVLKCELG- 159
           + A  +FDE+          + N F+  L +    +  I +   L   L  RV + + G 
Sbjct: 91  DDAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGP 150

Query: 160 ------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGL---------------------- 191
                 +  YS L+D  C+  + +    LF  + R GL                      
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210

Query: 192 --------------MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA--PNCVTFNT 235
                         +PNV +Y+I++ G C++    +A DLF  M  +G A  PN V +NT
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNT 270

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           ++ G  +  ET K   L H M  +
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQ 294


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 145/259 (55%), Gaps = 8/259 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++L+ M+++G+ P+   Y+ LIDG+C  G    A E+   M+ N C  N  TYN L
Sbjct: 361 DDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNEL 420

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+C+ K++ ++++L  +ML + ++P VVTYN L HG  +   +  A KL   M  S +
Sbjct: 421 ILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGL 480

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLE 177
             +  TY+ FID LCK G + EA  LF +L+    E GI+A    YS LIDG CK+GK+ 
Sbjct: 481 VPDEWTYSVFIDTLCKRGLVEEARSLFESLK----EKGIKANEVIYSTLIDGYCKVGKVS 536

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               L   +   G +PN +TYN +I G+C +    +A  L   M  + + P   T+  L+
Sbjct: 537 DGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILI 596

Query: 238 LGCIRNNETSKVVELLHRM 256
              ++++E  +  ++  +M
Sbjct: 597 DNLLKDDEFDQAHDMFDQM 615



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 137/260 (52%), Gaps = 2/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYN 59
           +DE   +   M+   V PN F  +T+++G+C  G +  A EL+VS  +  G   +  TY 
Sbjct: 185 IDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA-ELYVSKIVQAGLSLDTFTYT 243

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI GYC+ K+V+ +  ++  M +KG     V+Y  L HG  E  +V+ ALKLF +M   
Sbjct: 244 SLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED 303

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +      TY   I  LC+ G   EA  +F+ +    C+  +  Y+ LI  LC+    + A
Sbjct: 304 NCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDA 363

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++   +   GL+P+VVTYN +I G+C  G    A ++   ME+   +PN  T+N L+LG
Sbjct: 364 KKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILG 423

Query: 240 CIRNNETSKVVELLHRMDER 259
             R     K + LLH+M ER
Sbjct: 424 FCRGKNIHKAMSLLHKMLER 443



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 128/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   +  ++Q G+  + F Y++LI G+C    +D A  +F+SM   GC+ N V+Y  LI
Sbjct: 222 EAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLI 281

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C+ + V+E+L L+S+M      PTV TY  +   L ++ +   AL +F EM      
Sbjct: 282 HGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQ 341

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I  LC++    +A ++   +        +  Y+ LIDG CK G   +A E+
Sbjct: 342 PNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEI 401

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +      PN  TYN +I GFC    + KA  L   M  + + PN VT+N L+ G  +
Sbjct: 402 LSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCK 461

Query: 243 NNETSKVVELLHRMDE 258
             +     +LL  M+E
Sbjct: 462 EGDLGSAYKLLSLMNE 477



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 125/256 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  M++R ++PN   Y+ LI G C  G++  A +L   M+ +G + +  TY+  I
Sbjct: 432 KAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFI 491

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   VEE+ +L+  +  KGI+   V Y+TL  G  ++ +V     L D+M  +   
Sbjct: 492 DTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCV 551

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + TYN+ IDG CK     EA  L   +     E   + Y+ LID L K  + + A ++
Sbjct: 552 PNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDM 611

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G  P+V  Y   IH +C+ G++  A  L   M AKG+ P+ + +   +    R
Sbjct: 612 FDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGR 671

Query: 243 NNETSKVVELLHRMDE 258
                    +L RM E
Sbjct: 672 FGSIDGAFGILKRMHE 687



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 121/258 (46%), Gaps = 3/258 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M ++  +PN   Y+ LI   C     D A+++   M   G + +VVTYN LI
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK      +L + S M S    P   TYN L  G      +  A+ L  +M    + 
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I G CK G +  A +L   +           YS  ID LCK G +E A  L
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI 241
           F+SL   G+  N V Y+ +I G+C  G++     L   M + G  PN +T+N+L+ G C 
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566

Query: 242 RNN--ETSKVVELLHRMD 257
             N  E   +V+++ + D
Sbjct: 567 EKNFKEARLLVDIMIKRD 584



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L   M +    P    Y+ +I   C  G    A  +F  M    C  NV TY  
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   C+  + +++  + + ML KG+ P+VVTYN L  G  +      AL++   M+ ++
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYN  I G C+   I +A  L   +   K +  +  Y+ LI G CK G L +A+
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL+P+  TY++ I   C  G +++A  LF  ++ KG+  N V ++TL+ G 
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529

Query: 241 IRNNETSKVVELLHRM 256
            +  + S    LL +M
Sbjct: 530 CKVGKVSDGRFLLDKM 545



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A +LL LM + G+ P+ + YS  ID  C  G ++ AR LF S+   G   N V Y+T
Sbjct: 465 LGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYST 524

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK   V +   L  +MLS G  P  +TYN+L  G  +    + A  L D M   D
Sbjct: 525 LIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD 584

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   ID L K+    +A ++F  +        +  Y+  I   C  G+L+ A 
Sbjct: 585 IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAE 644

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L   +   G+MP+ + Y + I  +   G +D A  +   M   G  P+  T++ L+
Sbjct: 645 VLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLI 701



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 130/304 (42%), Gaps = 65/304 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L + + ++G++ N  +YSTLIDG+C  G++   R L   M   GC+ N +TYN+
Sbjct: 500 VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           LI+GYCK K+ +E+  L   M+ + I P   TY  L   L +  + + A  +FD+M    
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619

Query: 117 QHSDV-------------------------------AAETSTYNTFIDGLCKNGYIVEAA 145
            H DV                                 +T  Y  FID   + G I  A 
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF 679

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA--------------------W----- 180
            + + +  + CE     YSCLI  L      E +                    W     
Sbjct: 680 GILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDY 739

Query: 181 ----ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
               +LF  +   G  PN  TY   I G C  G ++ AH LF  M+ KG +PN   +N+L
Sbjct: 740 EFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSL 799

Query: 237 MLGC 240
            LGC
Sbjct: 800 -LGC 802



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 35/238 (14%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN L+    +   ++E  ++Y EML   + P + T NT+ +G  ++  V  A     ++ 
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 118 HSDVAAETSTYNTFIDGLCKN------------------------------GY-----IV 142
            + ++ +T TY + I G C+N                              G+     + 
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA +LF  +    C   +  Y+ +I  LC++G+   A  +F+ +      PNV TY ++I
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              C D   D A  +   M  KG+ P+ VT+N L+ G  +   ++  +E+L  M+  N
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 29/268 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+  M  +G+ P+  +Y+  ID +   G ID A  +   M   GC  +  TY+ 
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSC 699

Query: 61  LINGYCKTK-----------------------------DVEESLNLYSEMLSKGIRPTVV 91
           LI      K                             D E +L+L+ +M   G  P   
Sbjct: 700 LIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNAN 759

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           TY     GL ++  +E A +LFD M+    +     YN+ +   C+ G   EA      +
Sbjct: 760 TYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIM 819

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
              +    +++   L+ GL   G  E A  +F S  +     + + + ++I G    G  
Sbjct: 820 IENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLS 879

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           DK  DLF  ME +G   +  T++ L+ G
Sbjct: 880 DKCSDLFGIMETQGCQIHPKTYSMLIEG 907



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 28/238 (11%)

Query: 49  NGCMHNVVTYNTLIN-----GY-----------CKTKDVEESLNLYSEMLSK-------- 84
           +G  HNV ++ +++N     GY            K+ D  E+     EML          
Sbjct: 104 HGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAF 163

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
             + T+  YN L   L     ++    ++ EM    V     T NT ++G CK G +VE 
Sbjct: 164 KFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVE- 222

Query: 145 AELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           AEL+ + ++++  L ++   Y+ LI G C+   ++ A  +F S+P  G + N V+Y  +I
Sbjct: 223 AELYVS-KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLI 281

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           HGFC   ++D+A  LF  M      P   T+  ++    +    ++ + +   M E++
Sbjct: 282 HGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKH 339



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 74/171 (43%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L   M + G  PNA  Y   I G C  G ++ A  LF  M   G   N   YN+L+   C
Sbjct: 745 LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSC 804

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +     E++     M+     P + +   L  GL++    E A ++F      +   +  
Sbjct: 805 QLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEM 864

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            +   IDGL K G   + ++LF  +    C++  + YS LI+G   I +++
Sbjct: 865 VWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915



 Score = 37.4 bits (85), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 36/71 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A R+    +Q     +  V+  LIDG    G  D+  +LF  M+  GC  +  TY+ L
Sbjct: 845 EKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSML 904

Query: 62  INGYCKTKDVE 72
           I G+   ++++
Sbjct: 905 IEGFDGIQEID 915


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 135/257 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  M+  GV PN   YS +I+  C++G ++ A  LF  M + GC  N+ T+  LI 
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G      + E+L+L+  M+  G  P VV YNTL HGL     +E AL++ D+MQ S    
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             +TY+  IDG  K+G +V A+E +  +    C   +  Y+C++D LCK    + A  L 
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G  PN +T+N  I G C +G+++ A  L   M+  G  PN  T+N L+    R 
Sbjct: 443 EKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502

Query: 244 NETSKVVELLHRMDERN 260
           N+  +   L   ++ RN
Sbjct: 503 NKYEEAFGLFQEIEARN 519



 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 138/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L  LMIQ G  PN   Y+TLI G C  G ++ A ++   M  +GC+ NV TY+ LI
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K+ D+  +   ++ M+S G RP VVTY  +   L +    + A  L ++M      
Sbjct: 392 DGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT 451

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T T+NTFI GLC NG +  A +L   ++   C   I  Y+ L+D L ++ K E A+ L
Sbjct: 452 PNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +    L PN+VTYN +++GF   G M +A  LF     +G AP+ +T+NT++    +
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571

Query: 243 NNETSKVVELLHRMDE 258
             +     +L+ R+  
Sbjct: 572 QGKVKIAAQLVERVSS 587



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 121/241 (50%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P+  VY+ LIDG C  G I+ A +L   M  NG   NVV+Y+ +IN  C + +VE +  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L+++M  +G    + T+  L  G F   ++  AL L+  M           YNT I GLC
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
            NG + EA ++   ++   C   +  YS LIDG  K G L  A E +  +   G  PNVV
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  M+   C +   D+A+ L   M  +G  PN +TFNT + G   N      ++LL RM
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 257 D 257
            
Sbjct: 481 Q 481



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 5/246 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+ PN F Y+ L+   C    +D A +LFV M   GC  + VTY T+++  CK   
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++  L         +P+V  YN L  G+ +  ++E A+KL  EM  + V     +Y+ 
Sbjct: 230 IDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+ LC +G +  A  LF  + +  C+  I  ++ LI G    GKL  A +L++ + + G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             PNVV YN +IHG C++G +++A  +   M+  G  PN  T++ L+ G  ++ +     
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404

Query: 251 ELLHRM 256
           E  +RM
Sbjct: 405 ETWNRM 410



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 123/256 (48%), Gaps = 5/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD    +L  M   G+     ++  +I+G+   G  ++A ++F  +   GC   V  YN 
Sbjct: 90  MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++        +    LY+ M   G+ P V TYN L   L +  +V+ A KLF EM +  
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T +  LCK G I +A EL    +       +  Y+ LIDG+CK G++E A 
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP-----SVPVYNALIDGMCKEGRIEVAI 264

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ PNVV+Y+ +I+  C  G ++ A  LF  M  +G   N  TF  L+ GC
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324

Query: 241 IRNNETSKVVELLHRM 256
               +  + ++L   M
Sbjct: 325 FMRGKLYEALDLWKLM 340



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 2/218 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A+ L++ M   G  PN   ++T I G C  G ++ A +L   M  +GC+ N+ TYN L
Sbjct: 436 DQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNEL 495

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   +    EE+  L+ E+ ++ ++P +VTYNT+ +G      +  AL+LF +      
Sbjct: 496 LDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGT 555

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAW 180
           A ++ TYNT I   CK G +  AA+L   +  +K     I  Y+ LI G C    +E A 
Sbjct: 556 APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAM 615

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND-GQMDKAHDL 217
                    G+ PN  T+N ++  F +  G M   H L
Sbjct: 616 AFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHIL 653



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 1/188 (0%)

Query: 69  KDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           +++   L  +S +  S   + T  TY  +   L    +++    +  +M+   +      
Sbjct: 52  RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +   I+G  + G   +A ++F  +    C+  +  Y+ L+D L    K +    L+ ++ 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           + GL+PNV TYNI++   C + ++D AH LF++M  KG  P+ VT+ T++    +  +  
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 248 KVVELLHR 255
              EL  R
Sbjct: 232 DARELAGR 239



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           M EA +L    + RG  P++  Y+T+I  +C  G++  A +L   +      H +++TY 
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           +LI G C   ++EE++    + +++GI P   T+N L    F+
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 69/157 (43%), Gaps = 1/157 (0%)

Query: 104 HQVEHALKLFDEMQHSDVAAET-STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
             +   L  F  + +S+    T STY   I+ L +   +     + + +++       + 
Sbjct: 52  RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           + C+I+G  ++G  E A ++F  +   G  P V  YN ++    ++ +    + L+ +M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             G+ PN  T+N L+    +N+      +L   M  +
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNK 208


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 142/258 (55%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  LL+ M ++G   +  +Y TLI GFC  G +DR +ELF  M   G   NVVTY+ 
Sbjct: 230 MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 289

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C+    +E+  + + M   GI P VVTY  L  GL +  +  HA+ L + M    
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  + GLCK G +++A ++ R +     +  +  Y+ L+ GLC  GK++ A 
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409

Query: 181 ELFQSL--PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           +LF S+      L PNV T+N++I G C +G++ KA  +   M  KG   N VT+N L+ 
Sbjct: 410 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 469

Query: 239 GCIRNNETSKVVELLHRM 256
           GC++  +  + +EL  ++
Sbjct: 470 GCLKAGKIKEAMELWKQV 487



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 137/261 (52%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M   G  PN+   +TL+DG C  G +D A EL  +M   G   +VV Y T
Sbjct: 195 LKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 254

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C   +++    L+ EML KGI   VVTY+ L HGL  + Q + A  + + M    
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   IDGLCK+G    A +L   +     E     Y+ L+ GLCK G +  A+
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 374

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM--EAKGVAPNCVTFNTLML 238
           ++ + +   G   +VVTYN ++ G C+ G++D+A  LF  M      + PN  TFN L+ 
Sbjct: 375 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 434

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  +    +K V++  +M ++
Sbjct: 435 GLCKEGRLTKAVKIHRKMVKK 455



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 132/253 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           ++ L+++RG   N F+ + ++ G C  G +  A  L   M       ++V+YNTLING C
Sbjct: 131 VVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLC 190

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K K ++E++ L  EM + G  P  VT  TL  GL +  +++ A++L + M+     A+  
Sbjct: 191 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVV 250

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y T I G C NG +    ELF  +        +  YSCL+ GLC++G+ + A  +  ++
Sbjct: 251 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 310

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ P+VVTY  +I G C DG+   A DL   M  KG  P+ VT+N L+ G  +    
Sbjct: 311 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370

Query: 247 SKVVELLHRMDER 259
               ++L  M E+
Sbjct: 371 IDAFKILRMMIEK 383



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 139/261 (53%), Gaps = 4/261 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ +L+ M + G+ P+   Y+ LIDG C  G    A +L   M   G   + VTYN L+
Sbjct: 302 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 361

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V ++  +   M+ KG +  VVTYNTL  GL +  +V+ ALKLF+ M  ++  
Sbjct: 362 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 421

Query: 123 AETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETA 179
            E +  T+N  I GLCK G + +A ++ R + V K   G +  Y+ L+ G  K GK++ A
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKM-VKKGSCGNLVTYNMLLGGCLKAGKIKEA 480

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL++ +  +G +PN  TY+I+I GFC    ++ A  LF +M   G+ P    +NTLM  
Sbjct: 481 MELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMAS 540

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +     +   L   M   N
Sbjct: 541 LCKEGSLEQAKSLFQEMGNAN 561



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 128/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+  M ++ V P+   Y+TLI+G C   ++  A  L + M+  GC  N VT  TL+
Sbjct: 162 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 221

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   ++E++ L   M  KG    VV Y TL  G      ++   +LFDEM    ++
Sbjct: 222 DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 281

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TY+  + GLC+ G   EA  +   +        +  Y+ LIDGLCK G+   A +L
Sbjct: 282 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P+ VTYN+++ G C +G +  A  +   M  KG   + VT+NTLM G   
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401

Query: 243 NNETSKVVELLHRM 256
             +  + ++L + M
Sbjct: 402 KGKVDEALKLFNSM 415



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 137/261 (52%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMI--QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +DEA +L + M   +  + PN F ++ LI G C  G + +A ++   M   G   N+VTY
Sbjct: 405 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTY 464

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+ G  K   ++E++ L+ ++L  G  P   TY+ L  G  ++  +  A  LF EM+ 
Sbjct: 465 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRT 524

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +      YNT +  LCK G + +A  LF+ +    CE  I +++ +IDG  K G  + 
Sbjct: 525 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQF 584

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             EL   +  +GL P+ +T++ +I+     G++D+A      M A G  P+ + +++L+ 
Sbjct: 585 VKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 644

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G     +T++++ LLH+M  +
Sbjct: 645 GLSSKGDTTEIINLLHQMAAK 665



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 120/256 (46%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L    +   + P+    + L+D    +     A  ++  M     + +  + + LI
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +   +  +    +   +L +G    V   N +  GL     V  A+ L  EM    V+
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YNT I+GLCK   + EA  L   +    C       + L+DGLCK G+++ A EL
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +++ + G   +VV Y  +I GFCN+G +D+  +LF +M  KG++ N VT++ L+ G  R
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 243 NNETSKVVELLHRMDE 258
             +  +   +L+ M E
Sbjct: 297 LGQWKEANTVLNAMAE 312



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   G+ P  F Y+TL+   C  G +++A+ LF  M    C  +++++NT+I+G  K  D
Sbjct: 522 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 581

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +    L  +M+  G+RP  +T++TL + L ++ +++ A    + M  S    +   Y++
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
            + GL   G   E   L   +      L  +  S ++  LC
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 67/151 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M      P+   ++T+IDG    G+    +EL + M   G   + +T++T
Sbjct: 547 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST 606

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN   K  +++E+ +    M++ G  P  + Y++L  GL         + L  +M    
Sbjct: 607 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
              +    +T +  LC +   V+  EL  T 
Sbjct: 667 TVLDRKIVSTILTCLCHSIQEVDVMELLPTF 697



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 70/153 (45%)

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           Q   A+ LF      ++    +T N  +D L ++     A  ++R +  +       + S
Sbjct: 54  QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LI+      K +  + +   + + G   NV   NI++ G C +G + +A  L  +M  K
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
            V+P+ V++NTL+ G  +  +  + V LL  M+
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 206



 Score = 39.3 bits (90), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   L+ M+  G  P+A VY +L+ G    G+      L   M   G + +    +T
Sbjct: 617 LDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVST 676

Query: 61  LINGYCKT---KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           ++   C +    DV E L  + +  S+G     ++ N L   L ++HQ    L+L
Sbjct: 677 ILTCLCHSIQEVDVMELLPTFFQGTSEG---ASISCNEL---LMQLHQSHPKLQL 725


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 141/258 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL+DLM + G RP+   Y+TLI G CL G ID A +    M   G   +  TYNTL+
Sbjct: 501 KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   ++++  ++ EML  GI P VVTY+T+ HGLF   +   A +L+  M  S   
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  ++GL KN  + EA +LF++L     +L I  ++ +I  L K G+ E A  L
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P+V TY ++      +G +++  DLF  ME  G  PN    N L+   + 
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLH 740

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L ++DE+N
Sbjct: 741 RGDITRAGAYLSKLDEKN 758



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E   LL+LM++ G+ P+  +++ +   +     ID A  +F  M   G   +VV +  
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGA 418

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V++++  +++M+++G+ P +  +N+L +GL  + + E A + + EM +  
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +NT +  LC  G +++A  L   +  +     + +Y+ LI G C +G+++ A 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    +  VGL P+  TYN ++HG+C  G++D A+ +F +M   G+ P  VT++T++ G 
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598

Query: 241 IRNNETSKVVELLHRM 256
                 S+  EL   M
Sbjct: 599 FTTRRFSEAKELYLNM 614



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 133/267 (49%), Gaps = 10/267 (3%)

Query: 3   EASRL---LDLMIQR----GVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DING--CM 52
           +A RL   +D++I+R    G  P+   Y+TL+ GFC     + A EL   M D  G  C 
Sbjct: 141 DAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCP 200

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            NVV+Y T+ING+     V+++ NL+ EM+ +GI+P VVTY T+  GL +   V+ A  +
Sbjct: 201 PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           F +M    V  +  TYN  I G    G   E   +   +     +     Y  L++ LC 
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            G+   A   F S+ R G+ PNV  Y I+IHG+   G + + HDL   M   G++P+   
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           FN +     +     + + + ++M ++
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQ 407



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 124/239 (51%), Gaps = 3/239 (1%)

Query: 2   DEASRLLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +EA  LL +M     R   PN   Y+T+I+GF   G++D+A  LF+ M   G   NVVTY
Sbjct: 182 EEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTY 241

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
            T+I+G CK + V+ +  ++ +M+ KG++P   TYN L HG   I + +  +++ +EM  
Sbjct: 242 TTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +  +  TY + ++ LC NG   EA   F ++     +  +  Y  LI G    G L  
Sbjct: 302 HGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSE 361

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +L   +   GL P+   +NI+   +     +D+A  +F  M+ +G++P+ V F  L+
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALI 420



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 38/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+ RG++PN   Y+T+IDG C    +DRA  +F  M   G   +  TYN 
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278

Query: 61  LINGY-----------------------------------CKTKDVEESLNLYSEMLSKG 85
           LI+GY                                   C      E+   +  M+ KG
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKG 338

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I+P V  Y  L HG      +     L + M  + ++ +   +N       K   I EA 
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM 398

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +F  ++       +  +  LID LCK+G+++ A   F  +   G+ PN+  +N +++G 
Sbjct: 399 HIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN--ETSKVVELLHRMDER 259
           C   + +KA + + +M  +G+ P+ V FNT++   C +    +  ++++L+ R+  R
Sbjct: 459 CTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  R+L+ M   G++P+ + Y +L++  C  G    AR  F SM   G   NV  Y  LI
Sbjct: 291 EVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILI 350

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY     + E  +L + M+  G+ P    +N +F    +   ++ A+ +F++M+   ++
Sbjct: 351 HGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLS 410

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   +   ID LCK G + +A   F  +        I  ++ L+ GLC + K E A E 
Sbjct: 411 PDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEF 470

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI 241
           +  +   G+ P+VV +N ++   C  GQ+ KA  L   ME  G  P+ +++ TL+ G C+
Sbjct: 471 YFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCL 530

Query: 242 --RNNETSKVVELL 253
             R +E +K ++++
Sbjct: 531 VGRIDEAAKSLDVM 544



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 4/226 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+   YS LI  FC  G ++     F  +  +G   N +  N L+ G C  K + E++
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 76  N-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHSDVAAETSTYNTF 131
           + L   M   G  P VV+YNTL  G     + E AL+L   M   Q         +Y T 
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+G    G + +A  LF  +     +  +  Y+ +IDGLCK   ++ A  +FQ +   G+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            P+  TYN +IHG+ + G+  +   +  +M A G+ P+C T+ +L+
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLL 315



 Score = 43.5 bits (101), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 61/154 (39%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L   +  +  +     ++ +I     +G  + A  LF ++   G + +V TY  
Sbjct: 639 VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCL 698

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +     +   +EE  +L+S M   G  P     N L   L     +  A     ++   +
Sbjct: 699 IAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKN 758

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + E ST    I  L ++ Y   A  L    RVL
Sbjct: 759 FSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792


>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score =  167 bits (422), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 136/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK   V+ ++ +Y  MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A +  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P++ TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 128/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 253 LIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A      M    +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 18/253 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 119

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            +  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 120 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  + 
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  
Sbjct: 240 VKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 248 KVVELLHRMDERN 260
           +   L+  M  + 
Sbjct: 300 QAHXLIDEMSMKG 312


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  167 bits (422), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 136/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y  MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P   TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK G +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 253 LIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 18/249 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 119

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +     YS LI+GLCK  K++ A ELF  + 
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEML 239

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C  G++D A +++  M ++ + P+ +T+NTL+ G  +  +  
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 248 KVVELLHRM 256
           +  +L+  M
Sbjct: 300 QANDLIDEM 308


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 141/260 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A ++L +MIQ G  P+A  YST+I GFC  G++  A +L   M   GC  +V   +T
Sbjct: 386 MERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLST 445

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   ++ +  L    +     P VV Y+ L H L +  ++  A    D M  + 
Sbjct: 446 LIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNR 505

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN+ +DGLCK+  I +A  LF  +R       +  YS +I   CK   L++A+
Sbjct: 506 CYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAF 565

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + +     +P+VVTY+ +I+G C  G +DKA D+F +M   G APN VT+NTL+ G 
Sbjct: 566 KMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGL 625

Query: 241 IRNNETSKVVELLHRMDERN 260
            + N+  +  E+L  M +++
Sbjct: 626 CKINKVEQAAEMLEIMRKQS 645



 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 152/292 (52%), Gaps = 35/292 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF---VSMDI--------- 48
           + EA  LL+ MI+RG RP+    STLID  C    ID A+EL    + MD          
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480

Query: 49  -----------------------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                  N C  +VVTYN++++G CK++ + ++  L+  M + G
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAG 540

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + P VVTY+ + H   + + ++ A K+ + M+ +    +  TY+  I+GLCK G + +A 
Sbjct: 541 VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAF 600

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++F+ +    C   +  Y+ LIDGLCKI K+E A E+ + + +    P+ +TY  +I+G 
Sbjct: 601 DVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGL 660

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           CN  ++++A  +  +M+ KG  P+ +T+ TL+    + N    V +LL  M+
Sbjct: 661 CNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 36/292 (12%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D+A RL++ M+ +G  PN   YS+L+ G C  G++D A  L   M  +GC  N+VTYNT
Sbjct: 964  VDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 1023

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH------------GLFEI----- 103
            +I+G+CK   ++E+ +L  EM+  G +P VVTY  L              GL E+     
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083

Query: 104  ------------------HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                               +VE A +L   M          +YNT I GLCK   + E  
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143

Query: 146  ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
             L   +    C   I  ++ +ID +CK  +++ A+ELF  +   G  PN+VTYN ++HG 
Sbjct: 1144 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 1203

Query: 206  CNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            C   + D+A  L  +M  K G +P+ +T+NT++ G  ++    +  +L  +M
Sbjct: 1204 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 1255



 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 141/258 (54%), Gaps = 1/258 (0%)

Query: 4    ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLI 62
            A  LL  M + GV  N  +++ +I G C   ++D A ELF  M+ +G C  +V TY+T++
Sbjct: 896  AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIV 955

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            +   K+  V+++  L  +M+SKG  P VVTY++L HGL +  +++ A  L   M  S  +
Sbjct: 956  DSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 1015

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                TYNT IDG CK G I EA  L   +    C+  +  Y+ L+D  CK GK E A  L
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 1075

Query: 183  FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             + +   G +PN+ TYN ++  FC   ++++A  L   M  KG  PN V++NT++ G  +
Sbjct: 1076 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 1135

Query: 243  NNETSKVVELLHRMDERN 260
              +  + V LL +M   N
Sbjct: 1136 ATKVHEGVLLLEQMLSNN 1153



 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 139/256 (54%), Gaps = 1/256 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D M ++G++ +A V+ +++ G C  G+   A   F  M    C  + VTYNT+IN
Sbjct: 180 AYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMIN 238

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G  K+  +++++ L  EM+  G  P V +YNT+ HG  + ++VE+AL L ++M       
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  +Y T I+GLCK   + EA  +   +    C+  +  Y  L+DG C++G L+ A EL 
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G  PN +TYN ++H FC    M++AH +   M   G  P+ + ++T++ G  + 
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418

Query: 244 NETSKVVELLHRMDER 259
            +  +  +LL +M  R
Sbjct: 419 GKLREAHDLLEQMIRR 434



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 139/257 (54%), Gaps = 1/257 (0%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            E   LL+ M+     P+   ++T+ID  C T  +D A ELF  +  +GC  N+VTYN+L+
Sbjct: 1141 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 1200

Query: 63   NGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            +G CK++  +++  L  EM  K G  P ++TYNT+  GL +  +V+ A KLF +M    +
Sbjct: 1201 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260

Query: 122  AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A +  TY+  I  LCK  ++ EA  +   +     + G   Y  LIDG CK G L+ A E
Sbjct: 1261 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 1320

Query: 182  LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            + Q L   G  P+VVT++I I      G++ +A +L   M   G+ P+ VT+NTL+ G  
Sbjct: 1321 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380

Query: 242  RNNETSKVVELLHRMDE 258
              + T   V+L   M +
Sbjct: 1381 DASLTEDAVDLFEVMRQ 1397



 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 1/243 (0%)

Query: 18   PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
            PN F ++ LI G C  G+I  A EL   M  +G   NV+ +N +I G C  + ++ +L L
Sbjct: 875  PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934

Query: 78   YSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            + EM   G   P V TY+T+   L +  +V+ A +L ++M     +    TY++ + GLC
Sbjct: 935  FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994

Query: 137  KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
            K G + EA  L + +    C   I  Y+ +IDG CK+G+++ A+ L + +   G  PNVV
Sbjct: 995  KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054

Query: 197  TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            TY +++  FC  G+ + A  L   M  KG  PN  T+N+L+    + +E  +  +LL  M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 257  DER 259
             ++
Sbjct: 1115 IQK 1117



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  LL+ M+ RG  P+   Y+T+I+G C   ++D A  +   M   GC  NV+TY T
Sbjct: 281 VENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGT 340

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+C+  D++ ++ L  +M  +G RP  +TYN + H     + +E A ++   M  + 
Sbjct: 341 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+T I G CK G + EA +L   +    C   +   S LID LCK   +++A 
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL +    +   P+VV Y+I+IH  C   ++ +A      M      P+ VT+N+++ G 
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520

Query: 241 IRNNETSKVVELLHRM 256
            ++   +    L  RM
Sbjct: 521 CKSRRINDAFLLFDRM 536



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 1/238 (0%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD-INGCMHNVVTYN 59
            +D A  L +L+ + G  PN   Y++L+ G C +   D+A  L   M    GC  +++TYN
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 1233

Query: 60   TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            T+I+G CK+K V+ +  L+ +MLS G+ P  VTY+ +   L +   ++ A  + + M  +
Sbjct: 1234 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 1293

Query: 120  DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                   TY T IDG CK G + +A E+ + L        +  +S  ID L K G+L  A
Sbjct: 1294 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 1353

Query: 180  WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             EL +++ R GL+P+ VTYN ++ GFC+    + A DLF  M   G  P+  T+ TL+
Sbjct: 1354 GELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 117/223 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA   LD+M++    P+   Y++++DG C +  I+ A  LF  M   G M +VVTY+ 
Sbjct: 491 LPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSI 550

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK  +++ +  +   M      P VVTY+ L +GL +   V+ A  +F EM    
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A    TYNT IDGLCK   + +AAE+   +R   C      Y+CLI+GLC   +LE AW
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAW 670

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
            + + +   G +P+ +TY  ++        ++    L  +MEA
Sbjct: 671 RVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 1/210 (0%)

Query: 51   CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
            C  N+ T+  LI+G C+  D+  +  L  EM   G+   V+ +N +  GL    +++ AL
Sbjct: 873  CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL 932

Query: 111  KLFDEMQHS-DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
            +LF EM+ S     +  TY+T +D L K+G + +A  L   +    C   +  YS L+ G
Sbjct: 933  ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992

Query: 170  LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            LCK GKL+ A  L Q + R G  PN+VTYN +I G C  G++D+A+ L  +M   G  PN
Sbjct: 993  LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052

Query: 230  CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             VT+  L+    +  +    + L+  M E+
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 1082



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 21/257 (8%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            MDEA+ +L+LM++ G  P A  Y TLIDGFC TG +D+A E+   +   G   +VVT++ 
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
             I+   K   + ++  L   ML  G+ P  VTYNTL  G  +    E A+ LF+ M+   
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399

Query: 121  VAAETSTYNTFIDGLC-KNGYIVEAAELFRTL------------RVLKCELGIEA---YS 164
               + +TY T +  L  K  Y    AE+ +++              L+  + +EA     
Sbjct: 1400 CEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLG 1459

Query: 165  C-LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
            C ++D   K G  + A ++F+ + +     NVV ++ M+  +    Q ++A  L+  M  
Sbjct: 1460 CAIVDMFGKCGSPQDARKVFEGMDQ----RNVVLWSAMLGVYVFHKQEEQAFGLWRVMGL 1515

Query: 224  KGVAPNCVTFNTLMLGC 240
            +GV P+ VTF +L+  C
Sbjct: 1516 EGVEPDAVTFLSLLTMC 1532



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 1/211 (0%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           +G  H +   N L+N   K     ++ +L+   +        VTY+TL  G     ++  
Sbjct: 120 DGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILP 179

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A +LFDEM    + A    + + + GLC  G   +A   FR +    C      Y+ +I+
Sbjct: 180 AYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMIN 238

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GL K  +L+ A  L + +   G  PNV +YN ++HGFC   +++ A  L   M  +G  P
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + V++ T++ G  + ++  +   ++ +M +R
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQR 329



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 4/130 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M+  G  PN   Y+TLIDG C   ++++A E+   M    C  + +TY  
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    +EE+  +  EM  KG  P  +TY TL   L + + +E   +L  EM+   
Sbjct: 656 LINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME--- 712

Query: 121 VAAETSTYNT 130
            A E   +N 
Sbjct: 713 -ATEEGQWNA 721



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 4/152 (2%)

Query: 107 EHALKLFD-EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           + AL  FD          +T T N  +  L +     +A +++R    L C   +  ++ 
Sbjct: 825 DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTI 882

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI GLC+ G + TA+EL + +PR G+  NV+ +N++I G C+  ++D A +LF +ME  G
Sbjct: 883 LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 226 -VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              P+  T++T++   +++ +      L+  M
Sbjct: 943 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDM 974



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 33/259 (12%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + +A  LL+ M++ G+ P+   Y+TL+ GFC     + A +LF  M   GC  +  TY T
Sbjct: 1350 LRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTT 1409

Query: 61   LINGYCKTKD------------VEESLNLYSEMLSK-----GIRPTVVTYNTLFHGLFEI 103
            L+      K             V+    L  E+ SK      +   V     +     + 
Sbjct: 1410 LVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKC 1469

Query: 104  HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA- 162
               + A K+F+ M   +V   ++    ++       +  +  + F   RV+  E G+E  
Sbjct: 1470 GSPQDARKVFEGMDQRNVVLWSAMLGVYV-------FHKQEEQAFGLWRVMGLE-GVEPD 1521

Query: 163  ---YSCLIDGLCKIGKLETAWELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               +  L+   C  G L+ A + F S+ R  GL P V  ++ +I      G +++A DL 
Sbjct: 1522 AVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM 1581

Query: 219  LDMEAKGVAPNCVTFNTLM 237
            L M  K   P+  T+N L+
Sbjct: 1582 LGMPCK---PSAATWNCLL 1597


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +LD+M  RGV P+++ Y +LI G C  G+++ A  +   M   G +   VTYNTLI+
Sbjct: 290 ARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLID 349

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC   D+ ++     EM+ + I PTV TYN L H LF   +++ A  +  +M  S +  
Sbjct: 350 GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVP 409

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           ++ TYN  I+G C+ G   +A  L   +     +  +  Y+ LI  L K  +++ A +LF
Sbjct: 410 DSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLF 469

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + R G  P+++ +N +I G C +G +D+A  L  +M+ + + P+ VT+NTLM G  R 
Sbjct: 470 EKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCRE 529

Query: 244 NETSKVVELLHRMDER 259
            +  +  ELL  M  R
Sbjct: 530 GKVEEARELLKEMKRR 545



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 138/248 (55%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D M++R + P    Y+ LI    L G++D A  +   M  +G + + +TYN LINGYC+ 
Sbjct: 365 DEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRC 424

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
            + +++ NL+ EM+SKGI+PT+VTY +L + L + ++++ A  LF+++     + +   +
Sbjct: 425 GNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  IDG C NG +  A  L + +           Y+ L+ G C+ GK+E A EL + + R
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKR 544

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P+ ++YN +I G+   G ++ A  +  +M + G  P  +T+N L+ G  +N +   
Sbjct: 545 RGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDL 604

Query: 249 VVELLHRM 256
             ELL  M
Sbjct: 605 AEELLKEM 612



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 128/255 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A    D+M ++GV P    ++ ++  F    + +    L+  M        V T+N +
Sbjct: 183 DDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIM 242

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   ++++ +    M + G++P VVTYNT+ HG     +VE A  + D M++  V
Sbjct: 243 INVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGV 302

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             ++ TY + I G+CK G + EA+ +   ++ +        Y+ LIDG C  G L  A+ 
Sbjct: 303 EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFG 362

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               + R  ++P V TYN++IH    +G+MD+A  +  DM   G+ P+ +T+N L+ G  
Sbjct: 363 YRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYC 422

Query: 242 RNNETSKVVELLHRM 256
           R     K   L   M
Sbjct: 423 RCGNAKKAFNLHDEM 437



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 106/219 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           ++ V+  LI   C     D A E F  M   G +  + T+N +++ + K    E    LY
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
           +EM    I+ TV T+N + + L +  +++ A      M++  V     TYNT I G C  
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G +  A  +   ++    E     Y  LI G+CK GKLE A  + + +  +GL+P  VTY
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           N +I G+CN G + KA     +M  + + P   T+N L+
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLI 383



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 91/185 (49%), Gaps = 3/185 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  L + +I+ G  P+  +++ LIDG C  G +DRA  L   MD    + + VTYNT
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+   VEE+  L  EM  +GIRP  ++YNTL  G  +   +  A  + DEM    
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  I GLCKN     A EL + +           Y  LI+G   IGK++ + 
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG---IGKVDDSS 638

Query: 181 ELFQS 185
           E   S
Sbjct: 639 EASDS 643



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 3/214 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D MI +G++P    Y++LI        +  A +LF  +   G   +++ +N LI
Sbjct: 429 KAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALI 488

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C   +++ +  L  EM  + I P  VTYNTL  G     +VE A +L  EM+   + 
Sbjct: 489 DGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIR 548

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YNT I G  K G I +A  +   +  +     +  Y+ LI GLCK  + + A EL
Sbjct: 549 PDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEEL 608

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
            + +   G+ P+  TY  +I G    G++D + +
Sbjct: 609 LKEMVSKGITPDDSTYFSLIEGI---GKVDDSSE 639



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 32  LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
           + G  D   EL ++ D  G   ++V ++ LI   C+ K  +++   +  M  KG+ P + 
Sbjct: 144 VAGVKDVFHELAITRDRLGTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIE 202

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           T+N +     +++Q E    L+ EM    + +   T+N  I+ LCK G + +A +   ++
Sbjct: 203 TFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM 262

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
             L  +  +  Y+ +I G C  G++E A  +   +   G+ P+  TY  +I G C  G++
Sbjct: 263 ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL 322

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++A  +   M+  G+ P  VT+NTL+ G
Sbjct: 323 EEASGILEKMKEIGLLPTAVTYNTLIDG 350


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 141/256 (55%), Gaps = 1/256 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RLLD M +RG+ P+  VY+T+I G C  G +D A   +  M  N C  +V+TY  L+
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILV 243

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK+  + ++  +  +M+  G  P VVTYNTL +G  ++  ++ A+ LF++M  +  +
Sbjct: 244 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 303

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  IDG CK     + A+L + +    CE     Y+ L+D L K GK   A+ L
Sbjct: 304 PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL 363

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q + R    P+  T+N+MI  FC  GQ+D A++LF  M  +G  P+  T+N ++ G  R
Sbjct: 364 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACR 423

Query: 243 NNETSKVVELLHRMDE 258
            N      +LL RM E
Sbjct: 424 ANRIDDARQLLERMTE 439



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +LL+ M + G  P+   Y++++ G C   ++D A E++  +   G   +VVT +T
Sbjct: 427 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCST 486

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK++ ++++  L  EM   G  P VV Y  L HG  +  Q++ +L  F EM    
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  ID LCK+  + +   L +T+           Y+ +IDGLCK    + A+
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAY 606

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL++ + + G  P VVTYN+++   C   ++D+A  L   ME+ G  P+ VT+N++  G 
Sbjct: 607 ELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGF 666

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ E  K   L   M  R
Sbjct: 667 WKSAEHDKAFRLFQAMKSR 685



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 137/260 (52%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +AS +L+ MI+ G  PN   Y+TLI+GFC  G +D A  LF  M  N C  +V TYN 
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK +  ++   L  EM+  G  P  +TYNTL   L +  +   A  L   M   D
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+N  ID  CK G +  A ELF+ +    C   I  Y+ +I G C+  +++ A 
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   G  P+VVTYN ++ G C   Q+D+A++++  +   G   + VT +TL+ G 
Sbjct: 432 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 491

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++       +LL  M ERN
Sbjct: 492 CKSRRLDDAEKLLREM-ERN 510



 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 135/252 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + +++   G   +    STLIDG C +  +D A +L   M+ NG   +VV Y  
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   +++SL  +SEML KG  PTV+TY+ +   L +  +V     L   M    
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   Y + IDGLCK+    EA EL++ ++   C   +  Y+ L+D LCK+ +L+ A 
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G +P+ VTYN +  GF    + DKA  LF  M+++G +P    ++ L+   
Sbjct: 642 HLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701

Query: 241 IRNNETSKVVEL 252
           +   +  + +E+
Sbjct: 702 VAEEKMDQAMEI 713



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 139/256 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L  +M++R  +P+ F ++ +ID FC  G++D A ELF  M   GC+ ++ TYN +I
Sbjct: 359 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 418

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   ++++  L   M   G  P VVTYN++  GL +  QV+ A ++++ +++    
Sbjct: 419 SGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF 478

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T +T IDGLCK+  + +A +L R +        + AY+ LI G CK  +L+ +   
Sbjct: 479 LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAF 538

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G +P V+TY+I+I   C   ++     L   M  +GV P+ + + +++ G  +
Sbjct: 539 FSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCK 598

Query: 243 NNETSKVVELLHRMDE 258
           ++   +  EL   M +
Sbjct: 599 SDSYDEAYELYKLMKQ 614



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  L + M++    P+ F Y+ LIDG+C         +L   M   GC  N +TYNT
Sbjct: 287 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 346

Query: 61  L-----------------------------------INGYCKTKDVEESLNLYSEMLSKG 85
           L                                   I+ +CK   ++ +  L+  M  +G
Sbjct: 347 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 406

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P + TYN +  G    ++++ A +L + M  +    +  TYN+ + GLCK   + EA 
Sbjct: 407 CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 466

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           E++  LR     L +   S LIDGLCK  +L+ A +L + + R G  P+VV Y I+IHGF
Sbjct: 467 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 526

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C   Q+DK+   F +M  KG  P  +T++ ++    ++        LL  M ER
Sbjct: 527 CKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 131/261 (50%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMI-QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +D+A +  D    Q G + + F  + L+  F    +   A +LF +     C  + +TY+
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TLING+CK +D +++  L  EM  +GI P    YNT+  GL +  +V+ AL  + +MQ  
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR- 230

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           + A    TY   +D LCK+  I +A+ +   +    C   +  Y+ LI+G CK+G ++ A
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF  +      P+V TYNI+I G+C   +      L  +M   G  PN +T+NTLM  
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350

Query: 240 CIRNNETSKVVELLHRMDERN 260
            +++ +      L   M  R+
Sbjct: 351 LVKSGKYIDAFNLAQMMLRRD 371



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 110/218 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +LL  M + G  P+   Y+ LI GFC   ++D++   F  M   GC+  V+TY+ 
Sbjct: 497 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 556

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK+  V +   L   ML +G+ P  + Y ++  GL +    + A +L+  M+ + 
Sbjct: 557 VIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A    TYN  +D LCK   + EA  L   +    C      Y+ + DG  K  + + A+
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            LFQ++   G  P    Y++++     + +MD+A +++
Sbjct: 677 RLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIW 714


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 146/289 (50%), Gaps = 35/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M  +G +P+   Y+ LI+G C  G +D A +   +M   GC  NV+T+N ++
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 159

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVT------------------------------ 92
              C T    ++  L S+ML KG  P+VVT                              
Sbjct: 160 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 219

Query: 93  -----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                YN L HG  +  +++ A++  D M       +  TYNT +  LCK+G +  A E+
Sbjct: 220 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 279

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              L    C   +  Y+ +IDGL K+GK E A +L   + R GL P+++TY+ ++ G   
Sbjct: 280 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 339

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +G++D+A   F D+E  G+ PN +T+N++MLG  ++ +T + ++ L  M
Sbjct: 340 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 388



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 139/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  M+++G  P+   ++ LI+  C  G + RA ++   M ++GC  N ++YN L+
Sbjct: 170 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 229

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K ++ ++     M+S+G  P +VTYNTL   L +  +V+ A+++ +++     +
Sbjct: 230 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 289

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G    A +L   +R    +  I  YS L+ GL + GK++ A + 
Sbjct: 290 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 349

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  L  +G+ PN +TYN ++ G C   Q D+A D    M +K   P   T+  L+ G   
Sbjct: 350 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 409

Query: 243 NNETSKVVELLHRMDER 259
                + ++LL+ +  R
Sbjct: 410 EGLAKEALDLLNELCSR 426



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 120/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M   G  PN+  Y+ L+ GFC   ++DRA E    M   GC  ++VTYNT
Sbjct: 203 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK   V+ ++ + +++ SKG  P ++TYNT+  GL ++ + E A+KL DEM+   
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 322

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ + GL + G + EA + F  L  L        Y+ ++ GLCK  + + A 
Sbjct: 323 LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAI 382

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +    +      P   TY I+I G   +G   +A DL  ++ ++G+
Sbjct: 383 DFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 121/237 (51%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           +S  +   C    + +A +L   M   G   +VVTYN LING CK   ++E++   + M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           S G +P V+T+N +   +    +   A KL  +M     +    T+N  I+ LC+ G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
            A ++   + +  C     +Y+ L+ G CK  K++ A E    +   G  P++VTYN ++
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              C DG++D A ++   + +KG +P  +T+NT++ G  +  +T + ++LL  M  +
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 102/192 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A   LD+M+ RG  P+   Y+TL+   C  G++D A E+   +   GC   ++TYNT
Sbjct: 238 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 297

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K    E ++ L  EM  KG++P ++TY++L  GL    +V+ A+K F +++   
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ + GLCK+     A +    +   +C+     Y+ LI+G+   G  + A 
Sbjct: 358 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 417

Query: 181 ELFQSLPRVGLM 192
           +L   L   GL+
Sbjct: 418 DLLNELCSRGLV 429



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 72/131 (54%)

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
           S ++ ++   CK   + +A +L   +R    +  +  Y+ LI+G+CK G+L+ A +   +
Sbjct: 83  SGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 142

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +P  G  PNV+T+NI++   C+ G+   A  L  DM  KG +P+ VTFN L+    R   
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 202

Query: 246 TSKVVELLHRM 256
             + +++L +M
Sbjct: 203 LGRAIDILEKM 213



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%)

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             +  +S  +   CK   +  A +L   +   G  P+VVTYN++I+G C +G++D+A   
Sbjct: 80  FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139

Query: 218 FLDMEAKGVAPNCVTFNTLM 237
             +M + G  PN +T N ++
Sbjct: 140 LNNMPSYGCQPNVITHNIIL 159


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 135/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 179 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 238

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V+ ++ +Y  MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 239 LIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 298

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 299 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 358

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  V L P+  TY ++I+ FC  G + K   L  +M+  G AP+ VT+N LM G
Sbjct: 359 KMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417



 Score =  136 bits (343), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 115/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 131 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 190

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 191 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVD 250

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AHDL  +M  KG+ P+  T+ TL+
Sbjct: 251 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 310

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 311 DGCCKEGDLDTAFEHRKRMIQEN 333



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 119 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 178

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 179 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 238

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 239 LIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 298

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 299 LKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 358

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 359 KMLREM 364



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 18/249 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 55  RSDIYVFSGLITAYLESGFXRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 105

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 106 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 165

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  + 
Sbjct: 166 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 225

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  
Sbjct: 226 VKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 285

Query: 248 KVVELLHRM 256
           +  +L+  M
Sbjct: 286 QAHDLIDEM 294


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 132/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  ++D+M+Q G  P+ + Y+++I G C  GE+  A E+   M    C  N VTYNTLI+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK   VEE+  L   + SKGI P V T+N+L  GL        A++LF+EM+      
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ID LC  G + EA  + + + +  C   +  Y+ LIDG CK  K   A E+F
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  N VTYN +I G C   +++ A  L   M  +G  P+  T+N+L+    R 
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553

Query: 244 NETSKVVELLHRM 256
            +  K  +++  M
Sbjct: 554 GDIKKAADIVQAM 566



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 129/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +LD MI R   PN   Y+TLI   C   +++ A EL   +   G + +V T+N+LI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C T++   ++ L+ EM SKG  P   TYN L   L    +++ AL +  +M+ S  A
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDG CK     EA E+F  + V         Y+ LIDGLCK  ++E A +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P+  TYN ++  FC  G + KA D+   M + G  P+ VT+ TL+ G  +
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 243 NNETSKVVELLHRM 256
                   +LL  +
Sbjct: 588 AGRVEVASKLLRSI 601



 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 143/260 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ L  ++  +G+ P+   +++LI G CLT     A ELF  M   GC  +  TYN 
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C    ++E+LN+  +M   G   +V+TYNTL  G  + ++   A ++FDEM+   
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+  + TYNT IDGLCK+  + +AA+L   + +   +     Y+ L+   C+ G ++ A 
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ Q++   G  P++VTY  +I G C  G+++ A  L   ++ KG+      +N ++ G 
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620

Query: 241 IRNNETSKVVELLHRMDERN 260
            R  +T++ + L   M E+N
Sbjct: 621 FRKRKTTEAINLFREMLEQN 640



 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 134/244 (54%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q G  P+ + ++TL++G C  G +  A E+   M   G   +V TYN++I+G CK  +V+
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E++ +  +M+++   P  VTYNTL   L + +QVE A +L   +    +  +  T+N+ I
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
            GLC       A ELF  +R   CE     Y+ LID LC  GKL+ A  + + +   G  
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            +V+TYN +I GFC   +  +A ++F +ME  GV+ N VT+NTL+ G  ++       +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527

Query: 253 LHRM 256
           + +M
Sbjct: 528 MDQM 531



 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 127/237 (53%), Gaps = 1/237 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M  +G  P+ F Y+ LID  C  G++D A  +   M+++GC  +V+TYNTLI+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK     E+  ++ EM   G+    VTYNTL  GL +  +VE A +L D+M       
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ +   C+ G I +AA++ + +    CE  I  Y  LI GLCK G++E A +L 
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLG 239
           +S+   G+      YN +I G     +  +A +LF +M E     P+ V++  +  G
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 135/252 (53%), Gaps = 1/252 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+ M   G+ P+   ++T++ G+   G++D A  +   M   GC  + V+ N +++G+C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270

Query: 67  KTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           K   VE++LN   EM ++ G  P   T+NTL +GL +   V+HA+++ D M       + 
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN+ I GLCK G + EA E+   +    C      Y+ LI  LCK  ++E A EL + 
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           L   G++P+V T+N +I G C       A +LF +M +KG  P+  T+N L+       +
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450

Query: 246 TSKVVELLHRMD 257
             + + +L +M+
Sbjct: 451 LDEALNMLKQME 462



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 133/256 (51%), Gaps = 2/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L  M   G   +   Y+TLIDGFC   +   A E+F  M+++G   N VTYNT
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK++ VE++  L  +M+ +G +P   TYN+L         ++ A  +   M  + 
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I GLCK G +  A++L R++++    L   AY+ +I GL +  K   A 
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630

Query: 181 ELFQS-LPRVGLMPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            LF+  L +    P+ V+Y I+  G CN  G + +A D  +++  KG  P   +   L  
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690

Query: 239 GCIRNNETSKVVELLH 254
           G +  +    +V+L++
Sbjct: 691 GLLTLSMEETLVKLVN 706



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 126/246 (51%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++P+   ++ LI   C   ++  A  +   M   G + +  T+ T++ GY +  D++ +
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFID 133
           L +  +M+  G   + V+ N + HG  +  +VE AL    EM + D    +  T+NT ++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLCK G++  A E+   +     +  +  Y+ +I GLCK+G+++ A E+   +      P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           N VTYN +I   C + Q+++A +L   + +KG+ P+  TFN+L+ G          +EL 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 254 HRMDER 259
             M  +
Sbjct: 424 EEMRSK 429



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 12/258 (4%)

Query: 2   DEASRLLDLMIQR-GVRPNAFVYST----LIDGFCLT-GEIDRARELFVSMDINGCMHNV 55
           DE   ++D MI   G++P+   Y+     L+DG  L   EI  A+     M + G   +V
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK-----MSVWGIKPDV 189

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
            T+N LI   C+   +  ++ +  +M S G+ P   T+ T+  G  E   ++ AL++ ++
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIG 174
           M     +    + N  + G CK G + +A    + +         +  ++ L++GLCK G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            ++ A E+   + + G  P+V TYN +I G C  G++ +A ++   M  +  +PN VT+N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369

Query: 235 TLMLGCIRNNETSKVVEL 252
           TL+    + N+  +  EL
Sbjct: 370 TLISTLCKENQVEEATEL 387



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 125/295 (42%), Gaps = 38/295 (12%)

Query: 4   ASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           A RL +L  ++    P   +Y  ++     +G  D  +++   M  + C     T+  LI
Sbjct: 66  ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125

Query: 63  NGYCKTKDVEESLNL----------------YSEMLS--------------------KGI 86
             Y + +  +E L++                Y+ ML+                     GI
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           +P V T+N L   L   HQ+  A+ + ++M    +  +  T+ T + G  + G +  A  
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP-RVGLMPNVVTYNIMIHGF 205
           +   +    C     + + ++ G CK G++E A    Q +  + G  P+  T+N +++G 
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C  G +  A ++   M  +G  P+  T+N+++ G  +  E  + VE+L +M  R+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  166 bits (421), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A R+LD M  +G+ P+++ Y +LI G C  G ++ A  LF  M   G + N VTYNT
Sbjct: 224 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 283

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC   D+E + +   EM+ KGI P+V TYN L H LF   ++  A  +  EM+   
Sbjct: 284 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 343

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+G  + G    A +L   +     E     Y+ LI  L +  +++ A 
Sbjct: 344 IIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 403

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G+ P+V+ +N MI G C +G +++A  L  +M+ K V P+ VTFNTLM G 
Sbjct: 404 DLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 463

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  +   LL  M  R
Sbjct: 464 CREGKVEEARMLLDEMKXR 482



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 143/291 (49%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           ++EAS L D M++ G+ PNA  Y+TLIDG+C  G+++RA                     
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318

Query: 40  --------------RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                          ++   M   G + + +TYN LINGY +  + + + +L++EMLSKG
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I PT VTY +L + L   ++++ A  LF+++    V+ +   +N  IDG C NG +  A 
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L + +           ++ L+ G C+ GK+E A  L   +   G+ P+ ++YN +I G+
Sbjct: 439 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGY 498

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              G +  A  +  +M + G  P  +T+N L+    +N E     ELL  M
Sbjct: 499 GRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 128/260 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A   +  M   G +PN   Y+T+I G+   G I+ AR +  +M + G   +  TY +
Sbjct: 189 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 248

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +EE+  L+ +M+  G+ P  VTYNTL  G      +E A    DEM    
Sbjct: 249 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    STYN  +  L   G + EA ++ + +R          Y+ LI+G  + G  + A+
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAF 368

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ P  VTY  +I+      +M +A DLF  +  +GV+P+ + FN ++ G 
Sbjct: 369 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGH 428

Query: 241 IRNNETSKVVELLHRMDERN 260
             N    +   LL  MD ++
Sbjct: 429 CANGNVERAFMLLKEMDRKS 448



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 122/226 (53%), Gaps = 2/226 (0%)

Query: 32  LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
           L G++ +ARE    M+  G   NVV+YNT+I+GY    ++E +  +   M  KGI P   
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           TY +L  G+ +  ++E A  LFD+M    +     TYNT IDG C  G + E A  +R  
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL-ERAFSYRDE 303

Query: 152 RVLKCEL-GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
            V K  +  +  Y+ L+  L   G++  A ++ + + + G++P+ +TYNI+I+G+   G 
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +A DL  +M +KG+ P  VT+ +L+    R N   +  +L  ++
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 409



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 3/207 (1%)

Query: 4   ASRLLDL---MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           A R  DL   M+ +G+ P    Y++LI        +  A +LF  +   G   +V+ +N 
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C   +VE +  L  EM  K + P  VT+NTL  G     +VE A  L DEM+   
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +YNT I G  + G I +A  +   +  +     +  Y+ LI  LCK  + + A 
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 543

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           EL + +   G+ P+  TY  +I G  N
Sbjct: 544 ELLKEMVNKGISPDDSTYLSLIEGMGN 570



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 86/176 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  L + ++ +GV P+  +++ +IDG C  G ++RA  L   MD      + VT+NT
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 458

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+   VEE+  L  EM  +GI+P  ++YNTL  G      ++ A  + DEM    
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                 TYN  I  LCKN     A EL + +           Y  LI+G+  +  L
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 574



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 82/143 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  LL  M ++ V P+   ++TL+ G C  G+++ AR L   M   G   + ++YNT
Sbjct: 434 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNT 493

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY +  D++++  +  EMLS G  PT++TYN L   L +  + + A +L  EM +  
Sbjct: 494 LISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 553

Query: 121 VAAETSTYNTFIDGLCKNGYIVE 143
           ++ + STY + I+G+     +VE
Sbjct: 554 ISPDDSTYLSLIEGMGNVDTLVE 576



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 3/118 (2%)

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           I    ELF  L + +  L +++ S + D L   GKL+ A E    +  +G  PNVV+YN 
Sbjct: 157 IATNRELFDELTLSRDRLSVKS-SIVFDLLE--GKLKKAREFIGFMEGLGFKPNVVSYNT 213

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +IHG+ + G ++ A  +   M  KG+ P+  T+ +L+ G  +     +   L  +M E
Sbjct: 214 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 271


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  166 bits (421), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 142/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A R+LD M  +G+ P+++ Y +LI G C  G ++ A  LF  M   G + N VTYNT
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC   D+E + +   EM+ KGI P+V TYN L H LF   ++  A  +  EM+   
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+G  + G   +A +L   +     E     Y+ LI  L +  +++ A 
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G+ P+V+ +N M+ G C +G +++A  L  +M+ K V P+ VTFNTLM G 
Sbjct: 458 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 517

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  +   LL  M  R
Sbjct: 518 CREGKVEEARMLLDEMKRR 536



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 145/291 (49%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           ++EAS L D M++ G+ PNA  Y+TLIDG+C  G+++RA                     
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372

Query: 40  --------------RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                          ++   M   G + + +TYN LINGY +  + +++ +L++EMLSKG
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I PT VTY +L + L   ++++ A  LF+++    V+ +   +N  +DG C NG +  A 
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L + +           ++ L+ G C+ GK+E A  L   + R G+ P+ ++YN +I G+
Sbjct: 493 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 552

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              G +  A  +  +M + G  P  +T+N L+    +N E     ELL  M
Sbjct: 553 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 603



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 130/255 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA +   +M ++G+ P     + ++  F     ++ A  L+  M        V T+N +
Sbjct: 174 DEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIM 233

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +N  CK   ++++      M   G +P VV+YNT+ HG      +E A ++ D M+   +
Sbjct: 234 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 293

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             ++ TY + I G+CK G + EA+ LF  +  +        Y+ LIDG C  G LE A+ 
Sbjct: 294 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 353

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               + + G+MP+V TYN+++H    +G+M +A D+  +M  KG+ P+ +T+N L+ G  
Sbjct: 354 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 413

Query: 242 RNNETSKVVELLHRM 256
           R     K  +L + M
Sbjct: 414 RCGNAKKAFDLHNEM 428



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 128/260 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A   +  M   G +PN   Y+T+I G+   G I+ AR +  +M + G   +  TY +
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +EE+  L+ +M+  G+ P  VTYNTL  G      +E A    DEM    
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    STYN  +  L   G + EA ++ + +R          Y+ LI+G  + G  + A+
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ P  VTY  +I+      +M +A DLF  +  +GV+P+ + FN ++ G 
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482

Query: 241 IRNNETSKVVELLHRMDERN 260
             N    +   LL  MD ++
Sbjct: 483 CANGNVERAFMLLKEMDRKS 502



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 135/257 (52%), Gaps = 2/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L   M +  +    + ++ +++  C  G++ +ARE    M+  G   NVV+YNT
Sbjct: 208 MEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNT 267

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY    ++E +  +   M  KGI P   TY +L  G+ +  ++E A  LFD+M    
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 327

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-GIEAYSCLIDGLCKIGKLETA 179
           +     TYNT IDG C  G + E A  +R   V K  +  +  Y+ L+  L   G++  A
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDL-ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 386

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++ + + + G++P+ +TYNI+I+G+   G   KA DL  +M +KG+ P  VT+ +L+  
Sbjct: 387 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 446

Query: 240 CIRNNETSKVVELLHRM 256
             R N   +  +L  ++
Sbjct: 447 LSRRNRMKEADDLFEKI 463



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 116/241 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           ++ V+  L+   C     D A + F  M   G +  + T N +++ + K   +E +  LY
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
           +EM    I  TV T+N + + L +  +++ A +    M+         +YNT I G    
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G I  A  +   +RV   E     Y  LI G+CK G+LE A  LF  +  +GL+PN VTY
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I G+CN G +++A     +M  KG+ P+  T+N L+          +  +++  M +
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395

Query: 259 R 259
           +
Sbjct: 396 K 396



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 3/207 (1%)

Query: 4   ASRLLDL---MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           A +  DL   M+ +G+ P    Y++LI        +  A +LF  +   G   +V+ +N 
Sbjct: 418 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 477

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G+C   +VE +  L  EM  K + P  VT+NTL  G     +VE A  L DEM+   
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +YNT I G  + G I +A  +   +  +     +  Y+ LI  LCK  + + A 
Sbjct: 538 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 597

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           EL + +   G+ P+  TY  +I G  N
Sbjct: 598 ELLKEMVNKGISPDDSTYLSLIEGMGN 624



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 87/176 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  L + ++ +GV P+  +++ ++DG C  G ++RA  L   MD      + VT+NT
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+   VEE+  L  EM  +GI+P  ++YNTL  G      ++ A ++ DEM    
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                 TYN  I  LCKN     A EL + +           Y  LI+G+  +  L
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 82/143 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  LL  M ++ V P+   ++TL+ G C  G+++ AR L   M   G   + ++YNT
Sbjct: 488 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 547

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY +  D++++  +  EMLS G  PT++TYN L   L +  + + A +L  EM +  
Sbjct: 548 LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 607

Query: 121 VAAETSTYNTFIDGLCKNGYIVE 143
           ++ + STY + I+G+     +VE
Sbjct: 608 ISPDDSTYLSLIEGMGNVDTLVE 630


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 148/254 (58%), Gaps = 3/254 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L D M ++ + P+   Y+++I G C +G++  ARE+F  M + G   + VTY  LI+
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK  +++E+ +++++M+ KG+ P VVTY  L  GL +  +++ A +L  EM    +  
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQP 485

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYNT ++GLCK G I +  +L   + +         Y+ L+D  CK+G++  A EL 
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           + +    L P +VT+N++++GFC  G ++    L   M  KG+ PN  TFN+LM   CI+
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605

Query: 243 NN--ETSKVVELLH 254
           NN   T+++ + +H
Sbjct: 606 NNMRATTEIYKAMH 619



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 131/237 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +LL  M + GV P+  VY+T+I GFC  G +  A +LF  M     + ++VTY ++I
Sbjct: 330 EAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVI 389

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK+  + E+  +++EML KG+ P  VTY  L  G  +  +++ A  + ++M    + 
Sbjct: 390 HGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLT 449

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY    DGLCKNG I  A EL   +     +  +  Y+ +++GLCKIG +E   +L
Sbjct: 450 PNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKL 509

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +   G  P+ +TY  ++  +C  G+M KAH+L   M  K + P  VTFN LM G
Sbjct: 510 MEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNG 566



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +L+D +  +G++P+ ++Y+ +I   C  GE+  A +L   M   G   + V Y T
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+CK  +V  +  L+ EM  K I P +VTY ++ HG+ +  ++  A ++F+EM    
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   IDG CK G + EA  +   +        +  Y+ L DGLCK G+++ A 
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + R GL PNV TYN +++G C  G +++   L  +M+  G  P+ +T+ TLM   
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532

Query: 241 IRNNETSKVVELLHRM 256
            +  E +K  ELL  M
Sbjct: 533 CKMGEMAKAHELLRIM 548



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 137/255 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  M  RG  P+   Y  ++ G+C  GE+D+  +L   +   G   +   YN +I
Sbjct: 260 EAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNII 319

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK  +V E+  L   M   G+ P  V Y T+  G  ++  V  A KLFDEM+   + 
Sbjct: 320 LLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIV 379

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY + I G+CK+G +VEA E+F  + V   E     Y+ LIDG CK G+++ A+ +
Sbjct: 380 PDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSV 439

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + GL PNVVTY  +  G C +G++D A++L  +M  KG+ PN  T+NT++ G  +
Sbjct: 440 HNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCK 499

Query: 243 NNETSKVVELLHRMD 257
                + V+L+  MD
Sbjct: 500 IGNIEQTVKLMEEMD 514



 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 130/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + + M+ +G+ P+   Y+ LIDG+C  GE+  A  +   M   G   NVVTY  
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G CK  +++ +  L  EM  KG++P V TYNT+ +GL +I  +E  +KL +EM  + 
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T TY T +D  CK G + +A EL R +   + +  +  ++ L++G C  G LE   
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE 577

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +   G+MPN  T+N ++  +C    M    +++  M  +GV P+  T+N L+ G
Sbjct: 578 RLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG 636



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 129/256 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ +   + GV  N    + ++   C  G++  A  L V M   G   +VV+Y  +++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+  ++++ L L  E+  KG++P    YN +   L +  +V  A +L   M+   V  
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   Y T I G CK G +  A +LF  +R  K    I  Y+ +I G+CK GK+  A E+F
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL P+ VTY  +I G+C  G+M +A  +   M  KG+ PN VT+  L  G  +N
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465

Query: 244 NETSKVVELLHRMDER 259
            E     ELLH M  +
Sbjct: 466 GEIDVANELLHEMSRK 481



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 116/227 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LL  M ++G++PN + Y+T+++G C  G I++  +L   MD+ G   + +TY T
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ YCK  ++ ++  L   ML+K ++PT+VT+N L +G      +E   +L + M    
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +T+N+ +   C    +    E+++ +           Y+ LI G CK   ++ AW
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAW 647

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            L + +   G      TY+ +I GF    +  +A  LF +M   G+ 
Sbjct: 648 FLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLV 694



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 80/133 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++  RL++ M+++G+ PNA  +++L+  +C+   +    E++ +M   G M +  TYN 
Sbjct: 573 LEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNI 632

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK ++++E+  L+ EM+ KG   T  TY+ L  G ++  +   A KLF+EM+   
Sbjct: 633 LIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHG 692

Query: 121 VAAETSTYNTFID 133
           + AE   Y+ F+D
Sbjct: 693 LVAEKDIYDIFVD 705



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 98/202 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++  +L++ M   G  P+   Y+TL+D +C  GE+ +A EL   M        +VT+N 
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C +  +E+   L   ML KGI P   T+N+L       + +    +++  M    
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +++TYN  I G CK   + EA  L + +      +    Y  LI G  K  K   A 
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682

Query: 181 ELFQSLPRVGLMPNVVTYNIMI 202
           +LF+ + + GL+     Y+I +
Sbjct: 683 KLFEEMRKHGLVAEKDIYDIFV 704



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 16/161 (9%)

Query: 106 VEHALKLFDEM---QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-------RVLK 155
           V  +  LF EM    + D  +    ++ +   L +NG+++EA +LF  L        V  
Sbjct: 149 VSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDS 208

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C L +   SC  +G+      + A ++F+  P +G+  N V+ NI++H  C  G++ +AH
Sbjct: 209 CNLFLSRLSCNFEGI------KIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAH 262

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +L + M  +G  P+ V++  ++ G  R  E  KV++L+  +
Sbjct: 263 NLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 18/216 (8%)

Query: 53  HNVVTYNTLINGYC-KTK-DVEESLNLYSEML-----SKGIRPTVVTYNTLFHGLFEIHQ 105
           +++ T   L+  +C K K DV +S +L++EML       G  P V  ++  F  L E   
Sbjct: 129 NDIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLV--FDLYFQVLVENGF 186

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGL-CKNGYIVEAAELFRTLRVLKCELGI--EA 162
           V  A KLF ++    V     + N F+  L C    I  A ++F        ELG+    
Sbjct: 187 VLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFP----ELGVCWNT 242

Query: 163 YSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
            SC  ++  LC++GK+  A  L   +   G  P+VV+Y +++ G+C  G++DK   L  +
Sbjct: 243 VSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDE 302

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           ++ KG+ P+   +N ++L   +N E  +  +LL  M
Sbjct: 303 LKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGM 338



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 48/115 (41%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M   + +   M  RGV P++  Y+ LI G C    +  A  L   M   G      TY+ 
Sbjct: 608 MRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDA 667

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           LI G+ K K   E+  L+ EM   G+      Y+      +E    E  L+L DE
Sbjct: 668 LIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722


>gi|297726211|ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group]
 gi|255678284|dbj|BAH94197.1| Os08g0248500 [Oryza sativa Japonica Group]
          Length = 1487

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 137/240 (57%)

Query: 19   NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
            +   YSTLIDG+CL G++D A +L   M   G   + VTY+TLINGYCK   +E +L+L+
Sbjct: 1206 DVITYSTLIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLF 1265

Query: 79   SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             +M+  G+ P ++TYN +  GLF+  Q   A +++  +    +  E ST N  + GLCKN
Sbjct: 1266 RQMVCNGVSPNIITYNIVLQGLFQTGQTRAAKEIYVRIIKRGIQLEISTCNIVLQGLCKN 1325

Query: 139  GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
                EA ++F+ L ++  +L    ++ +I  L + G+ + + +LF +L   GL P+VVTY
Sbjct: 1326 NLTGEALQMFQNLCLMDVKLETRTFNIMIGSLLRSGRKDESKDLFAALSANGLAPDVVTY 1385

Query: 199  NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             +MI     DG ++++ +LFL ME  G  PN    N ++   ++  E  +    L ++D+
Sbjct: 1386 TLMIENLIEDGLLEESDNLFLSMEKNGCVPNSRMLNCIVRKLLQKGEIGRAGVYLSKIDK 1445



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 112/214 (52%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            MDEA +LL  M+  G++P+   YSTLI+G+C    ++ A  LF  M  NG   N++TYN 
Sbjct: 1223 MDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNGVSPNIITYNI 1282

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++ G  +T     +  +Y  ++ +GI+  + T N +  GL + +    AL++F  +   D
Sbjct: 1283 VLQGLFQTGQTRAAKEIYVRIIKRGIQLEISTCNIVLQGLCKNNLTGEALQMFQNLCLMD 1342

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            V  ET T+N  I  L ++G   E+ +LF  L        +  Y+ +I+ L + G LE + 
Sbjct: 1343 VKLETRTFNIMIGSLLRSGRKDESKDLFAALSANGLAPDVVTYTLMIENLIEDGLLEESD 1402

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             LF S+ + G +PN    N ++      G++ +A
Sbjct: 1403 NLFLSMEKNGCVPNSRMLNCIVRKLLQKGEIGRA 1436



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 66/120 (55%)

Query: 141  IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
            + +     RT +    E+ +  YS LIDG C  GK++ A +L   +  VGL P+ VTY+ 
Sbjct: 1188 LAKKPRFSRTEQAHPSEVDVITYSTLIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYST 1247

Query: 201  MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +I+G+C   +M+ A  LF  M   GV+PN +T+N ++ G  +  +T    E+  R+ +R 
Sbjct: 1248 LINGYCKISRMENALSLFRQMVCNGVSPNIITYNIVLQGLFQTGQTRAAKEIYVRIIKRG 1307



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 50/111 (45%)

Query: 22   VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
             ++ +I     +G  D +++LF ++  NG   +VVTY  +I    +   +EES NL+  M
Sbjct: 1349 TFNIMIGSLLRSGRKDESKDLFAALSANGLAPDVVTYTLMIENLIEDGLLEESDNLFLSM 1408

Query: 82   LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
               G  P     N +   L +  ++  A     ++  +D + E ST    I
Sbjct: 1409 EKNGCVPNSRMLNCIVRKLLQKGEIGRAGVYLSKIDKNDFSLEASTAELLI 1459


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 142/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A R+LD M  +G+ P+++ Y +LI G C  G ++ A  LF  M   G + N VTYNT
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC   D+E + +   EM+ KGI P+V TYN L H LF   ++  A  +  EM+   
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+G  + G   +A +L   +     E     Y+ LI  L +  +++ A 
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G+ P+V+ +N M+ G C +G +++A  L  +M+ K V P+ VTFNTLM G 
Sbjct: 480 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGR 539

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  +   LL  M  R
Sbjct: 540 CREGKVEEARMLLDEMKRR 558



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 145/291 (49%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           ++EAS L D M++ G+ PNA  Y+TLIDG+C  G+++RA                     
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394

Query: 40  --------------RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                          ++   M   G + + +TYN LINGY +  + +++ +L++EMLSKG
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I PT VTY +L + L   ++++ A  LF+++    V+ +   +N  +DG C NG +  A 
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 514

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L + +           ++ L+ G C+ GK+E A  L   + R G+ P+ ++YN +I G+
Sbjct: 515 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 574

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              G +  A  +  +M + G  P  +T+N L+    +N E     ELL  M
Sbjct: 575 GRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 625



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 130/255 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA +   +M ++G+ P     + ++  F     ++ A  L+  M        V T+N +
Sbjct: 196 DEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIM 255

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +N  CK   ++++      M   G +P VV+YNT+ HG      +E A ++ D M+   +
Sbjct: 256 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 315

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             ++ TY + I G+CK G + EA+ LF  +  +        Y+ LIDG C  G LE A+ 
Sbjct: 316 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 375

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               + + G+MP+V TYN+++H    +G+M +A D+  +M  KG+ P+ +T+N L+ G  
Sbjct: 376 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 435

Query: 242 RNNETSKVVELLHRM 256
           R     K  +L + M
Sbjct: 436 RCGNAKKAFDLHNEM 450



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 128/260 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A   +  M   G +PN   Y+T+I G+   G I+ AR +  +M + G   +  TY +
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +EE+  L+ +M+  G+ P  VTYNTL  G      +E A    DEM    
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    STYN  +  L   G + EA ++ + +R          Y+ LI+G  + G  + A+
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ P  VTY  +I+      +M +A DLF  +  +GV+P+ + FN ++ G 
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504

Query: 241 IRNNETSKVVELLHRMDERN 260
             N    +   LL  MD ++
Sbjct: 505 CANGNVERAFMLLKEMDRKS 524



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 135/257 (52%), Gaps = 2/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L   M +  +    + ++ +++  C  G++ +ARE    M+  G   NVV+YNT
Sbjct: 230 MEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNT 289

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY    ++E +  +   M  KGI P   TY +L  G+ +  ++E A  LFD+M    
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 349

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-GIEAYSCLIDGLCKIGKLETA 179
           +     TYNT IDG C  G + E A  +R   V K  +  +  Y+ L+  L   G++  A
Sbjct: 350 LVPNAVTYNTLIDGYCNKGDL-ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++ + + + G++P+ +TYNI+I+G+   G   KA DL  +M +KG+ P  VT+ +L+  
Sbjct: 409 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 468

Query: 240 CIRNNETSKVVELLHRM 256
             R N   +  +L  ++
Sbjct: 469 LSRRNRMKEADDLFEKI 485



 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 116/241 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           ++ V+  L+   C     D A + F  M   G +  + T N +++ + K   +E +  LY
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
           +EM    I  TV T+N + + L +  +++ A +    M+         +YNT I G    
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G I  A  +   +RV   E     Y  LI G+CK G+LE A  LF  +  +GL+PN VTY
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I G+CN G +++A     +M  KG+ P+  T+N L+          +  +++  M +
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417

Query: 259 R 259
           +
Sbjct: 418 K 418



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 3/207 (1%)

Query: 4   ASRLLDL---MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           A +  DL   M+ +G+ P    Y++LI        +  A +LF  +   G   +V+ +N 
Sbjct: 440 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 499

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G+C   +VE +  L  EM  K + P  VT+NTL  G     +VE A  L DEM+   
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +YNT I G  + G I +A  +   +  +     +  Y+ LI  LCK  + + A 
Sbjct: 560 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 619

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           EL + +   G+ P+  TY  +I G  N
Sbjct: 620 ELLKEMVNKGISPDDSTYLSLIEGMGN 646



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 87/176 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  L + ++ +GV P+  +++ ++DG C  G ++RA  L   MD      + VT+NT
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+   VEE+  L  EM  +GI+P  ++YNTL  G      ++ A ++ DEM    
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                 TYN  I  LCKN     A EL + +           Y  LI+G+  +  L
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 650



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 82/143 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  LL  M ++ V P+   ++TL+ G C  G+++ AR L   M   G   + ++YNT
Sbjct: 510 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 569

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY +  D++++  +  EMLS G  PT++TYN L   L +  + + A +L  EM +  
Sbjct: 570 LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 629

Query: 121 VAAETSTYNTFIDGLCKNGYIVE 143
           ++ + STY + I+G+     +VE
Sbjct: 630 ISPDDSTYLSLIEGMGNVDTLVE 652


>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           viburnoides]
          Length = 431

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 133/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   + D A ELF  M + G + N V + T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L    Y+ LI GLC  G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+G CK     +A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AH L  +M  KG+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 DGCCKEGDLDXAFEHXKRMIQEN 347



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 127/246 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +G  +  + + A +LFDEM    +      + T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  +    + V +  L+ G      +    
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 113/244 (46%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 69  RSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+G CK  K + A ELF  +   GL+PN V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXV 248

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 249 XFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308

Query: 257 DERN 260
             + 
Sbjct: 309 SXKG 312


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 140/237 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+ +M+  G++PN   ++++++G C  G+++ AR++F  M   G   + V+YNT
Sbjct: 201 VDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNT 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GYCK     E+L++++EM  KGI P VVT+ +L H + +   +E A+ L  +M+   
Sbjct: 261 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERG 320

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   IDG CK G++ +A    R +R  + +  +  Y+ LI+G C +G+++ A 
Sbjct: 321 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAR 380

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           EL   +   GL P+VVTY+ +I  +C +     A +L   M  KGV P+ +T+++L+
Sbjct: 381 ELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 142/257 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  M   G  PN   Y+TL+  F   GE+D A  L   M   G   N+VT+N+++
Sbjct: 168 EALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMV 227

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   +E++  ++ EM+ +G+ P  V+YNTL  G  +      AL +F EM    + 
Sbjct: 228 NGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+ + I  +CK G +  A  L R +R    ++    ++ LIDG CK G L+ A   
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 347

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + +  + P+VV YN +I+G+C  G+MD+A +L  +MEAKG+ P+ VT++T++    +
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 407

Query: 243 NNETSKVVELLHRMDER 259
           N +T    EL  +M E+
Sbjct: 408 NCDTHSAFELNQQMLEK 424



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L+  M +RG++ N   ++ LIDGFC  G +D A      M       +VV YN 
Sbjct: 306 LEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNA 365

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYC    ++E+  L  EM +KG++P VVTY+T+     +      A +L  +M    
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY++ I  LC+   + +A  LF+ +  L  +     Y+ LIDG CK G +E A 
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERAL 485

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G++P+VVTY+++I+G     +  +A  L   +  +   P    ++ LM  C
Sbjct: 486 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM-HC 544

Query: 241 IRNNETSKVVELL 253
            R  E   V+ LL
Sbjct: 545 CRKAELKSVLALL 557



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A ++ D M++ G+ P+   Y+TL+ G+C  G    A  +F  M   G M +VVT+ +
Sbjct: 236 MEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  ++E ++ L  +M  +G++   VT+  L  G  +   ++ AL     M+   
Sbjct: 296 LIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      YN  I+G C  G + EA EL   +     +  +  YS +I   CK     +A+
Sbjct: 356 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL Q +   G++P+ +TY+ +I   C + ++  AH LF +M   G+ P+  T+ +L+ G 
Sbjct: 416 ELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 475

Query: 241 IRNNETSKVVELLHRM 256
            +     + + L  +M
Sbjct: 476 CKEGNVERALSLHDKM 491



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 53/306 (17%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   +  M Q  ++P+   Y+ LI+G+C+ G +D AREL   M+  G   +VVTY+T
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ--------------- 105
           +I+ YCK  D   +  L  +ML KG+ P  +TY++L   L E  +               
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460

Query: 106 --------------------VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                               VE AL L D+M  + V  +  TY+  I+GL K+   +EA 
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520

Query: 146 ELFRTL-------------RVLKC--ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           +L   L              ++ C  +  +++   L+ G C  G +  A +++QS+    
Sbjct: 521 QLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 580

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN---ETS 247
              +   Y+++IHG C  G + KA      M  +G APN  +  +L+ G   N    E  
Sbjct: 581 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEAD 640

Query: 248 KVVELL 253
           +V++ L
Sbjct: 641 QVIQQL 646



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 98/245 (40%), Gaps = 52/245 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   MI+ G++P+ F Y++LIDG C  G ++RA  L   M   G + +VVTY+ 
Sbjct: 446 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSV 505

Query: 61  LINGYCKTKDVEESLNL------------------------------------------- 77
           LING  K+    E+  L                                           
Sbjct: 506 LINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGL 565

Query: 78  -------YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
                  Y  ML +        Y+ L HG      V  AL    +M     A  +++  +
Sbjct: 566 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTIS 625

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            I GL +NG +VEA ++ + L +  C L   EA   LID     G ++   ++   + + 
Sbjct: 626 LIRGLFENGMVVEADQVIQQL-LNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKD 684

Query: 190 GLMPN 194
           GL+P+
Sbjct: 685 GLLPS 689


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 146/260 (56%), Gaps = 2/260 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYNT 60
            A  ++  M++ GV PN   Y++LI G+CL  +++ A  +F  M  +  GC+ +VVT+N+
Sbjct: 305 RAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNS 364

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK K+V+++++L SEM+ KG+ P V T+ +L  G  E+ +   A +LF  M+   
Sbjct: 365 LIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHG 424

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T    +DGL K     EA  LFR +     +L I  Y+ ++DG+CK+GKL  A 
Sbjct: 425 QVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDAR 484

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL  +  TYNIMI G C +G +D A +L   M+  G  PN  ++N  + G 
Sbjct: 485 KLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGL 544

Query: 241 IRNNETSKVVELLHRMDERN 260
           +R  + ++  + L  M ++ 
Sbjct: 545 LRKYDIARSRKYLQIMKDKG 564



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 131/254 (51%), Gaps = 4/254 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L LM + G+ P     +T+++G C+ G+++ A  L   M+  G   N  TY  L+NG C
Sbjct: 132 VLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLC 191

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K  D   +L    +M+ + + P VV YN +  GL +   V  AL L  EM   +V     
Sbjct: 192 KIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVV 251

Query: 127 TYNTFIDGLCKN-GYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETAWELFQ 184
           TYN  I GLC   G   E   LF  +   K  +  ++ +S L+DG CK G L  A  +  
Sbjct: 252 TYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVG 311

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM--EAKGVAPNCVTFNTLMLGCIR 242
            + R+G+ PNVVTYN +I G+C   QM++A  +F  M  E +G  P+ VT N+L+ G  +
Sbjct: 312 FMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCK 371

Query: 243 NNETSKVVELLHRM 256
             E  K + LL  M
Sbjct: 372 VKEVDKAMSLLSEM 385



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 4/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L++ M   G   NA  Y  L++G C  G+   A E    M       NVV YN 
Sbjct: 161 VNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNA 220

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQVEHALKLFDEM-QH 118
           +++G CK   V E+L L  EM    + P VVTYN L  GL  E       + LF+EM   
Sbjct: 221 ILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAE 280

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +  +  T++  +DG CK G ++ A  +   +  +  E  +  Y+ LI G C   ++E 
Sbjct: 281 KGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEE 340

Query: 179 AWELFQSLPR--VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           A  +F  + R   G +P+VVT+N +IHG+C   ++DKA  L  +M  KG+ P+  T+ +L
Sbjct: 341 AMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSL 400

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           + G     +     EL   M E
Sbjct: 401 IGGFCEVKKPLAARELFFTMKE 422



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 6/190 (3%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V T N  IN  C  +       +   M   G+ PT+VT NT+ +GL     V HAL L 
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG--IEAYSCLIDGLC 171
           ++M++        TY   ++GLCK G    A E  +  +++K  LG  +  Y+ ++DGLC
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLK--KMVKRNLGPNVVVYNAILDGLC 226

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND-GQMDKAHDLFLDMEA-KGVAPN 229
           K G +  A  L   +  V + PNVVTYN +I G C + G   +   LF +M A KG+ P+
Sbjct: 227 KRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPD 286

Query: 230 CVTFNTLMLG 239
             TF+ L+ G
Sbjct: 287 VQTFSILVDG 296



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 11/139 (7%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLK------CELGIEAYSCLIDGLCKIGKLETAWE 181
           +N     + K+ +   A  L + L  L       C L I      I+ LC + K    + 
Sbjct: 77  FNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIA-----INCLCHMRKTTLGFA 131

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   + ++GL P +VT N +++G C +G ++ A  L   ME  G   N  T+  L+ G  
Sbjct: 132 VLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLC 191

Query: 242 RNNETSKVVELLHRMDERN 260
           +  +TS  +E L +M +RN
Sbjct: 192 KIGDTSGALECLKKMVKRN 210


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  166 bits (420), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 133/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C    +D A ELF  M + G + N VT+ T
Sbjct: 182 LDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTT 241

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   +  A  L DEM    
Sbjct: 242 LIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKG 301

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 302 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAE 361

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P  VT+N LM G
Sbjct: 362 KMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 115/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  +  ++  +   G+RP+VV+YNTL +G   +  ++   +L   M+
Sbjct: 134 FNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMR 193

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 194 ASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 253

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +++G C  G +++AH L  +M  KG+ P+  T+ TL+
Sbjct: 254 LAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLI 313

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 314 DGCCKEGDLDAAFEHRKRMIQEN 336



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 127/246 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A  +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 122 ILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGD 181

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G++P V TY+ L +GL +   ++ A +LFDEM    +     T+ T
Sbjct: 182 LDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTT 241

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        J  Y+ L+ GLCK G L  A  L   +   G
Sbjct: 242 LIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKG 301

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 302 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAE 361

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 362 KMLREM 367



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 18/253 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 58  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 108

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            +  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 109 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVS 168

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +R    +  +  YS LI+GLCK   ++ A ELF  + 
Sbjct: 169 YNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEML 228

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  + +
Sbjct: 229 VKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLN 288

Query: 248 KVVELLHRMDERN 260
           +   L+  M  + 
Sbjct: 289 QAHGLIDEMXXKG 301


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 143/258 (55%), Gaps = 1/258 (0%)

Query: 3   EASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           E +R++ DLM  RGV+P+++ Y + I G C  G+++ A  +   M   G     VTYNTL
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC   ++E + +   +M+ +G+ PTV TYN L H LF   +++ A  +  EM    +
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             ++ TYN  I+G C+ G + +A  L   +     +     Y+ LI  L K G+++ A +
Sbjct: 363 VPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+ + R G+ P+++ +N +I G C +G MD+A  +  +M+   V P+ VTFNTLM G  
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRC 482

Query: 242 RNNETSKVVELLHRMDER 259
           R  +     EL+  M  R
Sbjct: 483 REGKVEAARELIEEMKSR 500



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 147/291 (50%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTG-------------------------- 34
           ++EAS +L+ M + G+RP A  Y+TLIDG+C  G                          
Sbjct: 277 LEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNM 336

Query: 35  ---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                    ++D A  +   M   G + + VTYN LINGYC+  +V+++  L+ EM+SKG
Sbjct: 337 LIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I+PT VTY +L + L +  +++ A  LF+++    +  +   +N  IDG C NG +  A 
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAF 456

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            + + +  +K       ++ L+ G C+ GK+E A EL + +   G+ P+ ++YN +I G+
Sbjct: 457 AMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGY 516

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              G M  A  +  +M + G  P  +T+N L+ G  +N E     +LL  M
Sbjct: 517 SKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEM 567



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 134/255 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A    D+M  +GV P+    + ++  F  +   ++A  L+  M       +VVT+N +
Sbjct: 138 DDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIM 197

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   ++++      M + GI+P VVTYNT+ HG     +VE A  +FD M+   V
Sbjct: 198 INVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGV 257

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             ++ TY +FI G+CK G + EA+ +   ++ +        Y+ LIDG C  G LE A++
Sbjct: 258 KPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFD 317

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               + R GLMP V TYN++IH    D +MD+A  +  +M  KG+ P+ VT+N L+ G  
Sbjct: 318 YRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYC 377

Query: 242 RNNETSKVVELLHRM 256
           R     K   L   M
Sbjct: 378 RCGNVKKAFTLHDEM 392



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 2/253 (0%)

Query: 9   DLMIQRGVR--PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L + RGV       +Y  LI   C     D A E F  M   G + +V   N +++ + 
Sbjct: 108 ELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFL 167

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K+   E++  LY+EM    I+ +VVT+N + + L +  +++ A +    M+   +     
Sbjct: 168 KSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVV 227

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT I G C  G +  A  +F  ++    +     Y   I G+CK GKLE A  + + +
Sbjct: 228 TYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM 287

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL P  VTYN +I G+CN G ++ A D    M  +G+ P   T+N L+     + + 
Sbjct: 288 KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKM 347

Query: 247 SKVVELLHRMDER 259
            +   ++  M E+
Sbjct: 348 DEADGIIKEMSEK 360



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  L + ++++G+ P+  +++ LIDG C  G +DRA  +   MD    + + VT+NT
Sbjct: 417 MKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNT 476

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+   VE +  L  EM S+GI+P  ++YNTL  G  +   ++ A ++ DEM    
Sbjct: 477 LMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG 536

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
                 TYN  I GLCKN     A +L + +           Y  LI+G+
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 104/205 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D MI +G++P    Y++LI      G + +A +LF  +   G   +++ +N LI
Sbjct: 384 KAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALI 443

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C   +++ +  +  EM    + P  VT+NTL  G     +VE A +L +EM+   + 
Sbjct: 444 DGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIK 503

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YNT I G  K G + +A  +   +  +     +  Y+ LI GLCK  + + A +L
Sbjct: 504 PDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQL 563

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCN 207
            + +   G+ PN  TY  +I G  N
Sbjct: 564 LKEMISKGITPNDNTYLSLIEGIGN 588


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++LD M+ R   PNA  Y+ +I   C    +D A E+   +   G + +V T+N+
Sbjct: 359 IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNS 418

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C + + + +++L+ EM  KG RP   TYN L   L    ++E AL L  EM+ + 
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG 478

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A     YNT IDG CKN  I EA E+F  + +         Y+ LIDGLCK  ++E A 
Sbjct: 479 CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAA 538

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL P+  TYN ++  FC  G + KA D+   M + G  P+ VT+ TL+ G 
Sbjct: 539 QLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598

Query: 241 IRNNETSKVVELLHRM 256
            +         LL  +
Sbjct: 599 CKAGRVQVASRLLRSI 614



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 138/257 (53%), Gaps = 1/257 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M  +G RP+ F Y+ LID  C + +++ A  L   M++NGC  NVV YNTLI+
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID 491

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K +EE+  ++ EM  +G+    VTYNTL  GL +  +VE A +L D+M    +  
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ +   CK G I +AA++ +T+    C   I  Y+ LI GLCK G+++ A  L 
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           +S+   G++     YN +I       +  +A  LF +M  K   P+ +T+  +  G C  
Sbjct: 612 RSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNG 671

Query: 243 NNETSKVVELLHRMDER 259
                + V+    M ER
Sbjct: 672 GGPIGEAVDFTVEMIER 688



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 141/260 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+ +  L+  +G+ P+   +++LI G CL+     A +LF  M   GC  +  TYN 
Sbjct: 394 VDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNM 453

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C ++ +EE+LNL  EM   G    VV YNTL  G  +  ++E A ++FDEM+   
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+ ++ TYNT IDGLCK+  + +AA+L   + +         Y+ L+   CK G ++ A 
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAA 573

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ Q++   G  P++VTY  +I G C  G++  A  L   ++ KG+      +N ++   
Sbjct: 574 DIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQAL 633

Query: 241 IRNNETSKVVELLHRMDERN 260
            + N T + + L   M +++
Sbjct: 634 FKRNRTHEAMRLFREMLDKS 653



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 142/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   +   +  G RP+ F Y+TL++G C  G    A E+  +M + G   ++ TYN+
Sbjct: 289 IDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNS 348

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  ++EE++ +  +M+S+   P  VTYN +   L + ++V+ A ++   +    
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N+ I GLC +     A +LF  ++   C      Y+ LID LC   KLE A 
Sbjct: 409 ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEAL 468

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G   NVV YN +I GFC + ++++A ++F +ME +GV+ + VT+NTL+ G 
Sbjct: 469 NLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGL 528

Query: 241 IRNNETSKVVELLHRM 256
            ++       +L+ +M
Sbjct: 529 CKSKRVEDAAQLMDQM 544



 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 134/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  ++D M+  G+ P+ + Y++LI G C  GEI+ A ++   M    C  N VTYN +I+
Sbjct: 327 AMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIIS 386

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK   V+E+  +   + SKGI P V T+N+L  GL      + A+ LF+EM+      
Sbjct: 387 SLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRP 446

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ID LC +  + EA  L + + +  C   +  Y+ LIDG CK  ++E A E+F
Sbjct: 447 DEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIF 506

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  + VTYN +I G C   +++ A  L   M  +G+ P+  T+N+L+    + 
Sbjct: 507 DEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKT 566

Query: 244 NETSKVVELLHRM 256
            +  K  +++  M
Sbjct: 567 GDIKKAADIVQTM 579



 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 135/251 (53%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +++ M   G+ P+   ++T++ G+   G +D A  +   M   GC    VT N LING+C
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   ++++L+   E +S+G RP   TYNTL +GL +I   +HA+++ D M    +  +  
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN+ I GLCK G I EA ++   +    C      Y+ +I  LCK  +++ A E+ + L
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G++P+V T+N +I G C       A DLF +M+ KG  P+  T+N L+     + + 
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464

Query: 247 SKVVELLHRMD 257
            + + LL  M+
Sbjct: 465 EEALNLLKEME 475



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 133/257 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+ + M++ G        + LI+GFC  G ID+A          G   +  TYNT
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK    + ++ +   ML  G+ P + TYN+L  GL ++ ++E A+K+ D+M   D
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYN  I  LCK   + EA E+ R L        +  ++ LI GLC     ++A 
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G  P+  TYN++I   C+  ++++A +L  +ME  G A N V +NTL+ G 
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGF 493

Query: 241 IRNNETSKVVELLHRMD 257
            +N    +  E+   M+
Sbjct: 494 CKNKRIEEAEEIFDEME 510



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 126/240 (52%), Gaps = 1/240 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  M   G   N  +Y+TLIDGFC    I+ A E+F  M++ G   + VTYNT
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+K VE++  L  +M+ +G+RP   TYN+L     +   ++ A  +   M  S 
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I GLCK G +  A+ L R++++    L   AY+ +I  L K  +   A 
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAM 643

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +      P+ +TY I+  G CN  G + +A D  ++M  +G  P   +F  L  G
Sbjct: 644 RLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEG 703



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 124/238 (52%), Gaps = 1/238 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++R +R +   ++ LI   C   ++  A  +   M   G   +  T+ T++ GY +  +
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +L +  +M+  G   T VT N L +G  +  +++ AL    E        +  TYNT
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++GLCK G+   A E+   + +   +  I  Y+ LI GLCK+G++E A ++   +    
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNNETS 247
             PN VTYN +I   C + ++D+A ++   + +KG+ P+  TFN+L+ G C+ +N  S
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKS 431



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 113/237 (47%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++P+   Y+ L++      ++        SM      H+V T+N LI   CK   V  ++
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            +  EM S G+ P   T+ T+  G  E   ++ AL++ ++M          T N  I+G 
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGF 283

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK G I +A    +             Y+ L++GLCKIG  + A E+  ++   GL P++
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            TYN +I G C  G++++A  +   M ++  +PN VT+N ++    + N   +  E+
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEI 400



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 98/203 (48%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN L+N       ++   + +S M+ + IR  V T+N L   L + HQV  A+ + +EM 
Sbjct: 171 YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMP 230

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              ++ + +T+ T + G  + G +  A  +   +    C       + LI+G CK G+++
Sbjct: 231 SYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRID 290

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A    Q     G  P+  TYN +++G C  G    A ++   M   G+ P+  T+N+L+
Sbjct: 291 QALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLI 350

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  E  + V++L +M  R+
Sbjct: 351 SGLCKLGEIEEAVKILDQMVSRD 373


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA   L  M++R +RPNA  Y   IDG+   GE++ A   F  M   G + NV  Y  
Sbjct: 502 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 561

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK  +V E+ +++  +LS+ +   V TY+ L HGL    ++  A  +F E+Q   
Sbjct: 562 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ I G CK G + +A++L   + +      I  Y+ LIDGLCK G++E A 
Sbjct: 622 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 681

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   GL PN VTY  M+ G+C       A  L  +M  +GV P+   +N ++  C
Sbjct: 682 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 741

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +  K ++L   M E+
Sbjct: 742 CKEEKFEKALDLFQEMLEK 760



 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 133/253 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M+  G++PNA VY+TL+      G ++ +R +   M   G + +V  YN+LI G+C
Sbjct: 438 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 497

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K K +EE+     EML + +RP   TY     G  +  ++E A + F+EM    V     
Sbjct: 498 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 557

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y   I+G CK G + EA  +FR +   +    ++ YS LI GL + GK+  A+ +F  L
Sbjct: 558 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              GL+PN  TYN +I G C  G +DKA  L  +M  KG+ P+ VT+N L+ G  +  E 
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 677

Query: 247 SKVVELLHRMDER 259
            +   L   ++ R
Sbjct: 678 ERAKNLFDDIEGR 690



 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 132/237 (55%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+AS+LL+ M  +G+ P+   Y+ LIDG C  GEI+RA+ LF  ++  G   N VTY  
Sbjct: 642 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 701

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYCK+K+   +  L  EML +G+ P    YN + +   +  + E AL LF EM    
Sbjct: 702 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A+ T ++NT I+G CK+G + EA  L   +   +       Y+ LID  CK G +  A 
Sbjct: 762 FAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 820

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L+  +    +MP   TY  ++HG+ N G M +   LF +M AKG+ P+ +T+  ++
Sbjct: 821 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 877



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 134/256 (52%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  +   + ++G+ PNAF Y++LI G C  G +D+A +L   M I G   ++VTYN 
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  ++E + NL+ ++  +G+ P  VTY  +  G  +      A +L +EM    
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   YN  ++  CK     +A +LF+ + + K      +++ LI+G CK GKL+ A 
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGFASTVSFNTLIEGYCKSGKLQEAN 785

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +     +PN VTY  +I   C  G M +A  L+L+M+ + V P   T+ +L+ G 
Sbjct: 786 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 845

Query: 241 IRNNETSKVVELLHRM 256
                 S+V  L   M
Sbjct: 846 HNIGNMSEVSALFEEM 861



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  LLD M +R + P    YS +I+G C  G +     +   M +NG   N V Y T
Sbjct: 397 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 456

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  + K   VEES  +   M  +GI P V  YN+L  G  +  ++E A     EM    
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY  FIDG  K G +  A   F  +        +  Y+ LI+G CK G +  A+
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +    ++ +V TY+++IHG   +G+M +A  +F +++ KG+ PN  T+N+L+ G 
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636

Query: 241 IRNNETSKVVELLHRM 256
            +     K  +LL  M
Sbjct: 637 CKQGNVDKASQLLEEM 652



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M+ +G+ P+ + Y  LI+GFC+      A+ + + M   G     +TYN 
Sbjct: 257 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 316

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ +  D+E++  +  EM++ GI   ++ +NTL +G+ +  ++E AL++  EM    
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  ++ TY+  I+G C+   +  A EL   ++  K    +  YS +I+GLC+ G L+   
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   GL PN V Y  ++     +G+++++  +   M  +G+ P+   +N+L++G 
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +    L  M ER
Sbjct: 497 CKAKRMEEARTYLMEMLER 515



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 126/243 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  MI  G++P    Y+ LIDGF   G+I++A  +   M   G   N++ +NTL+
Sbjct: 294 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 353

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   +E++L +  EM+ KG+ P   TY+ L  G      +  A +L DEM+   +A
Sbjct: 354 NGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA 413

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  I+GLC+ G +     + R + +   +     Y+ L+    K G++E +  +
Sbjct: 414 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 473

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G++P+V  YN +I GFC   +M++A    ++M  + + PN  T+   + G  +
Sbjct: 474 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 533

Query: 243 NNE 245
             E
Sbjct: 534 AGE 536



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 18/237 (7%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++ D M    V P+ + Y+ +I   C  G +  A+ + + M                   
Sbjct: 210 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGE----------------- 252

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K + ++E++ L   M+ KG+ P + TY+ L +G     +   A  +  EM    +  E 
Sbjct: 253 -KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 311

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN  IDG  + G I +A  +   +     E  +  ++ L++G+CK GK+E A E+ Q 
Sbjct: 312 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 371

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +   G+ P+  TY+++I G C    M +A +L  +M+ + +AP  +T++ ++ G  R
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCR 428



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 17/223 (7%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N V ++ L++ Y K   + E++N++    +   RP++++ N+L   L + ++VE   K+F
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 212

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIV-----------------EAAELFRTLRVLKC 156
           D M    V  +  TY   I   CK G +                  EA EL R++     
Sbjct: 213 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGL 272

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
              +  Y  LI+G C   +   A  +   +  VGL P  +TYN +I GF   G +++A  
Sbjct: 273 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 332

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +  +M A G+  N + +NTL+ G  +  +  K +E++  M E+
Sbjct: 333 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK 375



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 31/222 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ LL+ MI++   PN   Y++LID  C  G +  A+ L++ M     M    TY +
Sbjct: 781 LQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTS 840

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY    ++ E   L+ EM++KGI P  +TY  +         V  A KL DE+    
Sbjct: 841 LLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI---- 896

Query: 121 VAAETSTYNTFIDGL-CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                      + G+  K+G+                 LG+   S +  G    G ++ A
Sbjct: 897 ----------LVKGMPMKSGF----------------RLGLPTCSVIARGFQIAGNMDEA 930

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            E+ +S+ + G + N  +   ++ G  N    + + +L   M
Sbjct: 931 AEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           rugosa]
          Length = 414

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 133/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   + D A ELF  M + G + N V + T
Sbjct: 176 LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTT 235

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKG 295

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L    Y+ LI GLC  G+   A 
Sbjct: 296 LKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAE 355

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 356 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 128 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+G CK     +A ELF  + V         ++ LIDG CK G+++
Sbjct: 188 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 247

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AH L  +M  KG+ P+ +T+ TL+
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 307

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 308 DGCCKEGDLDSAFEHXKRMIQEN 330



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 127/246 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 175

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +G  +  + + A +LFDEM    +      + T
Sbjct: 176 LDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTT 235

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKG 295

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  +    + V +  L+ G      +    
Sbjct: 296 LKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAE 355

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 356 KMLREM 361



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 113/244 (46%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 52  RSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWG 111

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 171

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+G CK  K + A ELF  +   GL+PN V
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXV 231

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 232 XFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291

Query: 257 DERN 260
             + 
Sbjct: 292 SXKG 295


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 135/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 175 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   +  A  L DEM    
Sbjct: 235 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKG 294

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ +I GLC+ G+   A 
Sbjct: 295 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAE 354

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+  T+N LM G
Sbjct: 355 KMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 129/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 175 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L  A  L   +   G
Sbjct: 235 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKG 294

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A +    M  + +  + V +  ++ G  +        
Sbjct: 295 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAE 354

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 355 KMLREM 360



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 18/253 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 51  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 101

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            +  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 102 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 161

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  + 
Sbjct: 162 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 221

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  + +
Sbjct: 222 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLN 281

Query: 248 KVVELLHRMDERN 260
           +   L+  M  + 
Sbjct: 282 QAHGLIDEMSMKG 294


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA   L  M++R +RPNA  Y   IDG+   GE++ A   F  M   G + NV  Y  
Sbjct: 511 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 570

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK  +V E+ +++  +LS+ +   V TY+ L HGL    ++  A  +F E+Q   
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ I G CK G + +A++L   + +      I  Y+ LIDGLCK G++E A 
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   GL PN VTY  M+ G+C       A  L  +M  +GV P+   +N ++  C
Sbjct: 691 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 750

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +  K ++L   M E+
Sbjct: 751 CKEEKFEKALDLFQEMLEK 769



 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 133/253 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M+  G++PNA VY+TL+      G ++ +R +   M   G + +V  YN+LI G+C
Sbjct: 447 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 506

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K K +EE+     EML + +RP   TY     G  +  ++E A + F+EM    V     
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 566

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y   I+G CK G + EA  +FR +   +    ++ YS LI GL + GK+  A+ +F  L
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              GL+PN  TYN +I G C  G +DKA  L  +M  KG+ P+ VT+N L+ G  +  E 
Sbjct: 627 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686

Query: 247 SKVVELLHRMDER 259
            +   L   ++ R
Sbjct: 687 ERAKNLFDDIEGR 699



 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 132/237 (55%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+AS+LL+ M  +G+ P+   Y+ LIDG C  GEI+RA+ LF  ++  G   N VTY  
Sbjct: 651 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 710

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYCK+K+   +  L  EML +G+ P    YN + +   +  + E AL LF EM    
Sbjct: 711 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A+ T ++NT I+G CK+G + EA  L   +   +       Y+ LID  CK G +  A 
Sbjct: 771 FAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 829

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L+  +    +MP   TY  ++HG+ N G M +   LF +M AKG+ P+ +T+  ++
Sbjct: 830 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 886



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+L  M ++G  PN   Y+ +I G C    +D A EL  SM   G + ++ TY+ 
Sbjct: 231 VKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDI 290

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C  K   E+  +  EM+  G++P  +TYN L  G      +E A ++ DEM    
Sbjct: 291 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 350

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A    +NT ++G+CK G + +A E+ + +     E   + YS LI+G C+   +  A+
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 410

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + +  L P V+TY+++I+G C  G +   + +  +M   G+ PN V + TLM   
Sbjct: 411 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 470

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +   +L RM E+
Sbjct: 471 AKEGRVEESRMILERMREQ 489



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  LLD M +R + P    YS +I+G C  G +     +   M +NG   N V Y T
Sbjct: 406 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 465

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  + K   VEES  +   M  +GI P V  YN+L  G  +  ++E A     EM    
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY  FIDG  K G +  A   F  +        +  Y+ LI+G CK G +  A+
Sbjct: 526 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 585

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +    ++ +V TY+++IHG   +G+M +A  +F +++ KG+ PN  T+N+L+ G 
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645

Query: 241 IRNNETSKVVELLHRM 256
            +     K  +LL  M
Sbjct: 646 CKQGNVDKASQLLEEM 661



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M+ +G+ P+ + Y  LI+GFC+      A+ + + M   G     +TYN 
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 325

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ +  D+E++  +  EM++ GI   ++ +NTL +G+ +  ++E AL++  EM    
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  ++ TY+  I+G C+   +  A EL   ++  K    +  YS +I+GLC+ G L+   
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   GL PN V Y  ++     +G+++++  +   M  +G+ P+   +N+L++G 
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +    L  M ER
Sbjct: 506 CKAKRMEEARTYLMEMLER 524



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 126/243 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  MI  G++P    Y+ LIDGF   G+I++A  +   M   G   N++ +NTL+
Sbjct: 303 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 362

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   +E++L +  EM+ KG+ P   TY+ L  G      +  A +L DEM+   +A
Sbjct: 363 NGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA 422

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  I+GLC+ G +     + R + +   +     Y+ L+    K G++E +  +
Sbjct: 423 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 482

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G++P+V  YN +I GFC   +M++A    ++M  + + PN  T+   + G  +
Sbjct: 483 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 542

Query: 243 NNE 245
             E
Sbjct: 543 AGE 545



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 125/245 (51%), Gaps = 4/245 (1%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           RP+    ++L+       +++   ++F  M  +  + +V TY  +I+ +CK  +V+++  
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           +  EM  KG  P +VTYN +  GL     ++ A++L   M    +  +  TY+  I+G C
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
                 EA  +   L ++   L  E   Y+ LIDG  + G +E A+ +   +   G+  N
Sbjct: 297 MEKRSREAKLML--LEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEAN 354

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           ++ +N +++G C  G+M+KA ++  +M  KGV P+  T++ L+ G  R    ++  ELL 
Sbjct: 355 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD 414

Query: 255 RMDER 259
            M +R
Sbjct: 415 EMKKR 419



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 123/287 (42%), Gaps = 34/287 (11%)

Query: 4    ASRLLDLMIQRGVRPNAFVYS----------------------------------TLIDG 29
            A +LL+ M+ RGV P+AF+Y+                                  TLI+G
Sbjct: 724  AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEG 783

Query: 30   FCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPT 89
            +C +G++  A  L   M     + N VTY +LI+  CK   + E+  L+ EM  + + PT
Sbjct: 784  YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 843

Query: 90   VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
              TY +L HG   I  +     LF+EM    +  +  TY   ID  C+ G ++EA +L  
Sbjct: 844  AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 903

Query: 150  TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
             + V    + + AY  LI  LCK  +     +L   +   G    + T +++  GF   G
Sbjct: 904  EILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAG 963

Query: 210  QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             MD+A ++   M   G   N  +   L+ G      +     LL +M
Sbjct: 964  NMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 108/203 (53%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N V ++ L++ Y K   + E++N++    +   RP++++ N+L   L + ++VE   K+F
Sbjct: 144 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 203

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           D M    V  +  TY   I   CK G + +A  +   +    C   +  Y+ +I GLC+ 
Sbjct: 204 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRA 263

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
             L+ A EL +S+   GL+P++ TY+I+I+GFC + +  +A  + L+M   G+ P  +T+
Sbjct: 264 RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 323

Query: 234 NTLMLGCIRNNETSKVVELLHRM 256
           N L+ G +R  +  +   +   M
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEM 346



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 102/221 (46%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + EA+ LL+ MI++   PN   Y++LID  C  G +  A+ L++ M     M    TY +
Sbjct: 790  LQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTS 849

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L++GY    ++ E   L+ EM++KGI P  +TY  +         V  A KL DE+    
Sbjct: 850  LLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 909

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    + Y+  I  LCK     E  +L   +      LG+   S +  G    G ++ A 
Sbjct: 910  MPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAA 969

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            E+ +S+ + G + N  +   ++ G  N    + + +L   M
Sbjct: 970  EVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 67/132 (50%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           ++  +D   K G++VEA  +F   +  +    + + + L+  L K  K+E  W++F  + 
Sbjct: 148 FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMC 207

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
              ++P+V TY  MI   C  G +  A  + L+M  KG +PN VT+N ++ G  R     
Sbjct: 208 AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLD 267

Query: 248 KVVELLHRMDER 259
           + +EL   M ++
Sbjct: 268 EAIELKRSMVDK 279


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 140/254 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL   +  G  PN  VY+ LIDG+C  G+++ A ++F  MD+NGC  NV TY  LI
Sbjct: 195 EAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELI 254

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK++ ++ ++ L+S M+  G+ P VVTY  L  G     Q++ A +L   M++S + 
Sbjct: 255 SGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLV 314

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T +  ID LCK+  + EA  L  +L     ++    Y+ LIDGLCK G+   A  L
Sbjct: 315 PNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRL 374

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q+L   G +P+  TY+ +I G C   ++ +A  +  DM  KGV P+ VT+  ++   +R
Sbjct: 375 MQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVR 434

Query: 243 NNETSKVVELLHRM 256
                   ++L +M
Sbjct: 435 EVGADGSKKILDKM 448



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 120/237 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  + R L  +++ G  P++  Y++ + G+C  G +  A  LFV M + GC+    TY  
Sbjct: 88  LPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTA 147

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C    V E++++++ M + G  P    Y T+ HGL    +   A  L  +     
Sbjct: 148 LLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEG 207

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  YN  IDG C  G +  A ++F  + V  C   +  Y+ LI G CK  KL+ A 
Sbjct: 208 FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAM 267

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF  +   GL+PNVVTY  +I G C+DGQ+D A+ L   ME  G+ PN  T + L+
Sbjct: 268 MLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLI 324



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 113/239 (47%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   Y+TLI+ +CL G++  ++    S+   G   +   Y + + GYC+   +  +  L+
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M  +G   T  TY  L HGL     V  A+ +F  MQ    A +   Y T + GLC  
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G   EA  L         E  +  Y+ LIDG C +G LE A ++F+ +   G  PNV TY
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
             +I GFC   ++D+A  LF  M   G+ PN VT+  L+ G   + +      LL  M+
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME 309



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L   M+  G+ PN   Y+ LI G C  G++D A  L  SM+ +G + N  T + 
Sbjct: 263 LDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSV 322

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK + V E+  L   ++ KGI+   + Y +L  GL +  +   A +L   +    
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY++ IDGLC+   + EA  +   +     +     Y+ +ID L +    + + 
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSK 442

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G+ P+V TY I +  +C++G+M+ A  + L M   GV PN VT+N L+ G 
Sbjct: 443 KILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGY 502

Query: 241 IRNNETSKVVELLHRM 256
                TS+       M
Sbjct: 503 ANLGLTSQAFSTFKHM 518



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 127/275 (46%), Gaps = 16/275 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D + ++LD MI  G++P+ F Y+  +  +C  G ++ A  + + M  +G   N+VTYN L
Sbjct: 439 DGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNAL 498

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH----------------GLFEIHQ 105
           I GY       ++ + +  M++ G +P   +Y  L                   +++I +
Sbjct: 499 ICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAE 558

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           +++   L +EM    + +E   YN F+  LC+   + EA  L   ++        + Y+ 
Sbjct: 559 MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTS 618

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +I   C++  L  A     S+ + G +P + +Y  +I   C +G +  A  +F DM +K 
Sbjct: 619 IIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKE 678

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
                + +  L+ G ++    ++   LL  M+E+N
Sbjct: 679 YNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKN 713



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 35/247 (14%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  +IQ+G++ N  VY++LIDG C  G    A  L  ++   G + +  TY++LI
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+ K++ E++ +  +M+ KG++P+ VTY  +   L      + + K+ D+M  + + 
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY  F+   C                                     G++E A  +
Sbjct: 455 PDVFTYTIFVRSYCHE-----------------------------------GRMEDAEHM 479

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ PN+VTYN +I G+ N G   +A   F  M A G  PN  ++  L+   I+
Sbjct: 480 MLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539

Query: 243 NNETSKV 249
              ++ +
Sbjct: 540 KESSNNI 546



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RL+  ++ +G  P+A  YS+LIDG C   E+  A  +   M   G   + VTY  +I+
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIID 430

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              +    + S  +  +M++ GI+P V TY           ++E A  +   M    V  
Sbjct: 431 ELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCP 490

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID--------------- 168
              TYN  I G    G   +A   F+ +    C+   E+Y+ L+                
Sbjct: 491 NLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANS 550

Query: 169 -GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
             + KI +++    L + + ++ L   +  YN  +   C   ++D+A  L ++M++  + 
Sbjct: 551 VSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLT 610

Query: 228 PNCVTFNTLMLGCIR 242
           P+   + +++  C R
Sbjct: 611 PSEDVYTSIIACCCR 625



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 42/96 (43%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA   +D M++ G  P    Y  +I   C  G I  A+++F  M      +  + +  
Sbjct: 629 LTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRI 688

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           LI+G  +   V E  +L S M  K  RP+   Y  L
Sbjct: 689 LIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 55/128 (42%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M    + P+  VY+++I   C    +  A     SM  +G +  + +Y  
Sbjct: 594 LDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRH 653

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  C+   ++ +  ++ +MLSK      + +  L  GL +   V     L   M+  +
Sbjct: 654 IISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKN 713

Query: 121 VAAETSTY 128
                + Y
Sbjct: 714 YRPSDALY 721


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 147/256 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  L D+M+ RG +PN   YS +I G C  G+     +L   M + GC  +VV YNT
Sbjct: 177 IGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNT 236

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + V E+++++ +M   GI PTVVTY +L HGL  + + + A  L +EM+  +
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   ++  ID +CK G + EA  + +T+  +  E  +  Y+ L++G C   ++  A 
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEAR 356

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ +   G MP+V +++I+++G+C   ++D+A  LF +M  +G+ P+ V++NTL+ G 
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416

Query: 241 IRNNETSKVVELLHRM 256
            +     +  EL   M
Sbjct: 417 CQARRPLEAEELFKDM 432



 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 131/227 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL+ M    + P+   +S LID  C  GE+  AR +  +M   G   +V TYNTL+
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC   +V E+  ++  M+SKG  P V +++ L +G  +  +++ A +LFDEM H  + 
Sbjct: 344 NGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI 403

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T +YNT I GLC+    +EA ELF+ +        +  YS L+D L K G L+ A  L
Sbjct: 404 PDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGL 463

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           F+++   GL P++VTYNIMI G C  G+   A +LF ++  KG+ PN
Sbjct: 464 FRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPN 510



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 126/228 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L  M + GV P+   Y+TL++G+CL  E+  AR++F  M   G M +V +++ 
Sbjct: 317 VSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSI 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYCK K ++E+  L+ EM  +G+ P  V+YNTL  GL +  +   A +LF +M  + 
Sbjct: 377 LVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNG 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  +D L K GY+ +A  LFR +     +  +  Y+ +IDG+CK GK + A 
Sbjct: 437 YPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAR 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           ELF  L   GL PN       I G C  G +D+AH  F  ME    +P
Sbjct: 497 ELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 124/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    + M+     P+   +  L               L   M++ G  H+V++   
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   V+   ++  +++  G+ P V+T++TL +G     ++  A++LFD M    
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y+  I GLC+ G   E  +L   ++V+ CE  +  Y+ ++D LCK   +  A 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G++P VVTY  +IHG  N G+  +A  L  +M+   + P+ V F+ L+   
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 241 IRNNETSKVVELLHRMDE 258
            +  E S+   +L  M E
Sbjct: 312 CKEGEVSEARVILKTMTE 329



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 104/225 (46%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           I+ A   F  M     + ++V +  L +   + K  +  ++L  +M   GI   V++   
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L +    +  V++   +  ++    +     T++T I+G C  G I  A ELF  +    
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
            +  + +YS +I GLC++GK     +L + +  VG  P+VV YN ++   C D  +++A 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +F  M+  G+ P  VT+ +L+ G        +   LL+ M   N
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 93/188 (49%)

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           +++ ++L+ ++ M++    P++V +  LF  L  +   +  + L  +M+ + ++ +  + 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              I+  C+  ++     +   +  L  E  +  +S LI+G C  GK+  A ELF  +  
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  PNV +Y+I+I G C  G+  +   L   M+  G  P+ V +NT++    ++   ++
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 249 VVELLHRM 256
            V +  +M
Sbjct: 250 AVHIFCKM 257


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 139/255 (54%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +  + MI  G+ P+ F Y+ +ID  C  G+++ +R LFV M   G   +VVTYN+LI+GY
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K   +EE  +L++EM   G  P ++TYN L +   +  ++  A + F EM+++ +    
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY+T ID  CK G +  A +LF  +R          Y+ LID  CK G L  AW+L   
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + + G+  N+VTY  ++ G C  G+M +A ++F  M   G++PN   +  L+ G I+   
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 246 TSKVVELLHRMDERN 260
               +++L +M E N
Sbjct: 515 MEDAMKILKQMTECN 529



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ + RL   M + G+ P+   Y++LIDG+   G ++    LF  M   GC+ +++TYN 
Sbjct: 305 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YCK + +  +   +SEM + G++P VVTY+TL     +   ++ A+KLF +M+ + 
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + ID  CK G + EA +L   +     +L I  Y+ L+DGLCK G++  A 
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F+S+ + G+ PN   Y  ++HG+    +M+ A  +   M    + P+ + + +++ G 
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544

Query: 241 IRNNETSKVVELLHRMDER 259
               +  +   +L  M  R
Sbjct: 545 CSQRKLEETKLILEEMKSR 563



 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 136/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL+ M+Q GV+ N   Y+ L+DG C  G +  A E+F SM  +G   N   Y  
Sbjct: 445 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 504

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY K + +E+++ +  +M    I+P ++ Y ++  G     ++E    + +EM+   
Sbjct: 505 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++A      T ID   K G   +A   F+ ++ +  E  I  Y  LIDGLCK G +E A 
Sbjct: 565 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAV 624

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F  +  +GL PNV  Y  +I G C +  ++ A  LF +M+ +G+ P+   F  L+ G 
Sbjct: 625 DYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGN 684

Query: 241 IRNNETSKVVELLHRMDE 258
           +++    + + L+ RM E
Sbjct: 685 LKHGNLQEALVLISRMTE 702



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 120/256 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+     M      P A   + L+     +G     R+ F  M   G   +V TYN 
Sbjct: 235 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNV 294

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK  D+E S  L+ +M   G+ P VVTYN+L  G  ++  +E    LF+EM+   
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  I+  CK   +  A E F  ++    +  +  YS LID  CK G ++ A 
Sbjct: 355 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 414

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + R GL+PN  TY  +I   C  G + +A  L  DM   GV  N VT+  L+ G 
Sbjct: 415 KLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474

Query: 241 IRNNETSKVVELLHRM 256
            +     +  E+   M
Sbjct: 475 CKAGRMIEAEEVFRSM 490



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 118/232 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   +L+ M  RG+  N  + +T+ID +   G+   A   F  M   G    +VTY  
Sbjct: 550 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 609

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   VE +++ +  MLS G++P V  Y +L  GL + + +E A KLFDEMQ   
Sbjct: 610 LIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRG 669

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  + + +   IDG  K+G + EA  L   +  L  E  +  Y+ L+ G  + G+L  A 
Sbjct: 670 MTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQAR 729

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           + F  +   G++P  V    ++  +   GQ+D+A +L  +ME  G+     T
Sbjct: 730 KFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 125/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A ++L  M +  ++P+  +Y ++I G C   +++  + +   M   G   N V   T
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ Y K     ++LN + EM   G+  T+VTY  L  GL +   VE A+  F  M    
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    + Y + IDGLCKN  I  A +LF  ++       I A++ LIDG  K G L+ A 
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +  + +  ++  Y  ++ GF   G++ +A   F +M  KG+ P  V    L+   
Sbjct: 695 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 754

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +  + +EL + M+ 
Sbjct: 755 YKRGQLDEAIELKNEMER 772



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C+     ++ L + + +   +EE+   +S M +    P   + N L H L +    + 
Sbjct: 213 NICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQL 272

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
             K F++M  + +A    TYN  ID LCK G +  +  LF  +R +     +  Y+ LID
Sbjct: 273 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 332

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  K+G LE    LF  +  VG +P+++TYN +I+ +C   +M +A + F +M+  G+ P
Sbjct: 333 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 392

Query: 229 NCVTFNTLM 237
           N VT++TL+
Sbjct: 393 NVVTYSTLI 401



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%)

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA E F  +R  +      + + L+  L K G  +   + F  +   G+ P+V TY
Sbjct: 233 GLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 292

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N+MI   C +G ++ +  LF+ M   G++P+ VT+N+L+ G  +     +V  L + M +
Sbjct: 293 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 352


>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hederifolia]
          Length = 431

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 137/239 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 193 LNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  +    +L   M 
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G    G + +AHDL  +M  KG+ P+  T+ TL+
Sbjct: 265 LAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQEN 347



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 134/247 (54%), Gaps = 2/247 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 193 LNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCEL-GIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            IDG CKNG +  A E+++ + + +C L  +  Y+ LI GL K G L+ A +L   +   
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQM-LSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMK 311

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           GL P+  TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +   
Sbjct: 312 GLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 371

Query: 250 VELLHRM 256
            ++L  M
Sbjct: 372 EKMLREM 378



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 18/249 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 69  RSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 119

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  + 
Sbjct: 180 YNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  
Sbjct: 240 VKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLK 299

Query: 248 KVVELLHRM 256
           +  +L+  M
Sbjct: 300 QAHDLIDEM 308


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 143/263 (54%), Gaps = 7/263 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  +  R  +P+  +YST+ID  C    +  A  LF  M + G   +VVTYNTLI 
Sbjct: 182 AIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIY 241

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK-------LFDEM 116
           G+C    ++E++ L + M+ K I P V TY  L   L +  +V+ A +       L DEM
Sbjct: 242 GFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEM 301

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +     A+  TY++ IDGLCKNG++  A  LF  ++       +  ++ L+DGL K G+L
Sbjct: 302 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRL 361

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A E+FQ L   G   NV TYN+MI+G C  G +++A  +   ME  G  PN  TF T+
Sbjct: 362 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 421

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           ++   + +E  K  +LL +M  R
Sbjct: 422 IIALFKKDENDKAEKLLRQMIAR 444



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 129/253 (50%), Gaps = 7/253 (2%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G++P+ F  + LI+ FC  G+I     +   +   G   + VT NTLI G C    V++
Sbjct: 87  KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 146

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ + ++L++G +   V Y TL +G+ +I     A+KL  ++       +   Y+T ID
Sbjct: 147 ALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIID 206

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK   + EA  LF  + V      +  Y+ LI G C +GKL+ A  L   +    + P
Sbjct: 207 ALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINP 266

Query: 194 NVVTYNIMIHGFCNDGQMDKAH-------DLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
           +V TY I++   C +G++ +A        DL  +M  +G   + +T+++L+ G  +N   
Sbjct: 267 DVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHL 326

Query: 247 SKVVELLHRMDER 259
            + + L ++M ++
Sbjct: 327 DRAIALFNKMKDQ 339



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 7/233 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M  +G+  +   Y+TLI GFC+ G++  A  L   M +     +V TY  
Sbjct: 214 VSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTI 273

Query: 61  LINGYCKTKDVEES-------LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           L++  CK   V+E+        +L  EM  +G    V+TY++L  GL +   ++ A+ LF
Sbjct: 274 LVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 333

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           ++M+   +     T+   +DGL K G + +A E+F+ L      L +  Y+ +I+G CK 
Sbjct: 334 NKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 393

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           G LE A  +   +   G +PN  T+  +I       + DKA  L   M A+G+
Sbjct: 394 GLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 446



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + M+     P    ++ ++D F           L   +++ G   ++ T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNI 98

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    +    ++ +++L +G  P+ VT NTL  GL    QV+ AL   D++    
Sbjct: 99  LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 158

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y T I+G+CK G    A +L + +     +  +  YS +ID LCK   +  A+
Sbjct: 159 FQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAY 218

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF  +   G+  +VVTYN +I+GFC  G++ +A  L   M  K + P+  T+  L+
Sbjct: 219 GLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILV 275



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 7/199 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR-------ELFVSMDINGCMH 53
           + EA  LL++M+ + + P+ + Y+ L+D  C  G++  A+       +L   M   G   
Sbjct: 249 LKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPA 308

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V+TY++LI+G CK   ++ ++ L+++M  +GIRP + T+  L  GL++  +++ A ++F
Sbjct: 309 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVF 368

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            ++          TYN  I+G CK G + EA  +   +    C      +  +I  L K 
Sbjct: 369 QDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 428

Query: 174 GKLETAWELFQSLPRVGLM 192
            + + A +L + +   GL+
Sbjct: 429 DENDKAEKLLRQMIARGLL 447



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 4/209 (1%)

Query: 51  CMHN---VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE 107
           CM +   ++ +N +++ + K K    +++L   +  KGI+P + T N L +    + Q+ 
Sbjct: 52  CMRHTPPIIQFNKILDSFAKMKHYS-TVSLSHRLELKGIQPDLFTLNILINCFCHMGQIT 110

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
               +  ++        T T NT I GLC  G + +A      L     +L    Y  LI
Sbjct: 111 FGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLI 170

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           +G+CKIG    A +L + +      P+VV Y+ +I   C    + +A+ LF +M  KG++
Sbjct: 171 NGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 230

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            + VT+NTL+ G     +  + + LL+ M
Sbjct: 231 ADVVTYNTLIYGFCIVGKLKEAIGLLNVM 259


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 136/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A +LF  M +   + N VT+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 134/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL + ++++ A KLFDEM    +     T+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 116/203 (57%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A +LF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +A+DL  +M  KG+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQEN 347



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI G+  +G +  A E +     N       T   ++    K K  +    
Sbjct: 69  RSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A +LF  +    L+PN V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGV 248

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 140/258 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL+DLM + G RP    Y+TLI G CL G ID A +    M   G   +  TYNTL+
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   ++++  ++ EML  GI P VVTY+T+ HGLF   +   A +L+  M  S   
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  ++GL KN  + EA +LF++L     +L I  ++ +I  L K G+ E A  L
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P+V TY ++      +G +++  DLF  ME  G  PN    N L+   + 
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLH 740

Query: 243 NNETSKVVELLHRMDERN 260
             + ++    L ++DE+N
Sbjct: 741 RGDITRAGAYLCKLDEKN 758



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E   LL+LM++ G+ P+  +++ +   +     ID A  +F  M   G   +VV Y  
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGA 418

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V++++  +++M+++G+ P +  +N+L +GL  + + E A + + EM +  
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +NT +  LC  G +++A  L   +  +    G+ +Y+ LI G C +G+++ A 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    +  VGL P+  TYN ++HG+C  G++D A+ +F +M   G+ P  VT++T++ G 
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598

Query: 241 IRNNETSKVVELLHRM 256
                 S+  EL   M
Sbjct: 599 FTTRRFSEAKELYLNM 614



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 10/267 (3%)

Query: 3   EASRL---LDLMIQR----GVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DING--CM 52
           +A RL   +D++++R    G  P+   Y+TL+ GFC     + A EL   M D  G  C 
Sbjct: 141 DAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCP 200

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            NVV+Y  +ING+     V+++ NL+ EM+ +GI+P VVTY T+  GL +   V+ A  +
Sbjct: 201 PNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           F +M    V  +  TYN  I G    G   E   +   +     +     Y  L++ LC 
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            G+   A  LF S+ R G+ PNV  Y I+IHG+   G + + HDL   M   G++P+   
Sbjct: 321 NGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           FN +     +     + + + ++M ++
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQ 407



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 134/293 (45%), Gaps = 38/293 (12%)

Query: 2   DEASRLLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +EA  LL +M     R   PN   Y+ +I+GF   G++D+A  LF+ M   G   NVVTY
Sbjct: 182 EEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTY 241

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
            T+I+G CK + V+ +  ++ +M+ KG++P   TYN L HG   I + +  +++ +EM  
Sbjct: 242 TTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL-- 176
             +  +  TY + ++ LC NG   EA  LF ++     +  +  Y  LI G    G L  
Sbjct: 302 HGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSE 361

Query: 177 ---------------------------------ETAWELFQSLPRVGLMPNVVTYNIMIH 203
                                            + A  +F  + + GL P+VV Y  +I 
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALID 421

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             C  G++D A   F  M  +GVAPN   FN+L+ G    ++  K  E    M
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM 474



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 38/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+ RG++PN   Y+T+IDG C    +DRA  +F  M   G   +  TYN 
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278

Query: 61  LINGY-----------------------------------CKTKDVEESLNLYSEMLSKG 85
           LI+GY                                   C      E+  L+  M+ KG
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKG 338

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I+P V  Y  L HG      +     L + M  + ++ +   +N       K   I EA 
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM 398

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +F  ++       +  Y  LID LCK+G+++ A   F  +   G+ PN+  +N +++G 
Sbjct: 399 HIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN--ETSKVVELLHRMDER 259
           C   + +KA + + +M  +G+ P+ V FNT++   C +    +  ++++L+ R+  R
Sbjct: 459 CTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  R+L+ M   G++P+ + Y +L++  C  G    AR LF SM   G   NV  Y  LI
Sbjct: 291 EVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILI 350

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY     + E  +L + M+  G+ P    +N +F    +   ++ A+ +F++M+   ++
Sbjct: 351 HGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLS 410

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   Y   ID LCK G + +A   F  +        I  ++ L+ GLC + K E A E 
Sbjct: 411 PDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEF 470

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI 241
           +  +   G+ P+VV +N ++   C  GQ+ KA  L   ME  G  P  +++ TL+ G C+
Sbjct: 471 YFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCL 530

Query: 242 --RNNETSKVVELL 253
             R +E +K ++++
Sbjct: 531 VGRIDEAAKSLDVM 544



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 4/226 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+   YS LI  FC  G ++     F  +  +G   N +  N L+ G C  K + E++
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 76  N-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QHSDVAAETSTYNTF 131
           + L   M   G  P VV+YNTL  G     + E AL+L   M   Q         +Y   
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+G    G + +A  LF  +     +  +  Y+ +IDGLCK   ++ A  +FQ +   G+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            P+  TYN +IHG+ + G+  +   +  +M A G+ P+C T+ +L+
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLL 315



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 13/165 (7%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCK-NGYIVEAAE------LFRTLRVLKCEL 158
           ++ ALKLFD +      A    +N  +  + + +G      E      LF  + + +C +
Sbjct: 30  LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRM-IRECTI 88

Query: 159 GIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            +      YS LI   C++G+LE  +  F  + + G   N +  N ++ G C+  ++ +A
Sbjct: 89  KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148

Query: 215 HDLFLD-MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            D+ +  M   G  P+ V++NTL+ G        + +ELLH M +
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 61/154 (39%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L   +  +  +     ++ +I     +G  + A  LF ++   G + +V TY  
Sbjct: 639 VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCL 698

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +     +   +EE  +L+S M   G  P     N L   L     +  A     ++   +
Sbjct: 699 IAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKN 758

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + E ST    I  L ++ Y   A  L    RVL
Sbjct: 759 FSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 149/292 (51%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M+ +G  P+ F Y+T+IDG+C    +  A EL       G + + VTY +LI
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C   DVE +L L++E  +KGI+P +V YN+L  GL     + HAL++ +EM      
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392

Query: 123 AETSTYNTFIDGLCKNGYIVEAAEL---------------FRTL-----RVLKCELGIE- 161
            +  TYN  I+GLCK G I +A  +               F TL     + LK +  ++ 
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452

Query: 162 --------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                          Y+ +++GLCK GK+    E FQ +   G  PN +TYNI+I  FC 
Sbjct: 453 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 512

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +M++A  + + M  +G+ P+ V+FNTL+ G  RN +      L  +++E+
Sbjct: 513 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 138/237 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L +    +G++P+  VY++L+ G CL G I  A ++   M   GC  ++ TYN 
Sbjct: 341 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++ ++  + ++ + KG  P V T+NTL  G  +  +++ AL+L + M    
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +T TYN+ ++GLCK G + E  E F+ + +  C      Y+ LI+  C+  K+E A 
Sbjct: 461 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 520

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++   + + GL P+ V++N +I+GFC +G ++ A+ LF  +E KG +    TFNTL+
Sbjct: 521 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 577



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA RL+D M    V P+   Y+TLI G C       A      M   GC+ +  TYNT
Sbjct: 237 LPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK   V+E+  L  + + KG  P  VTY +L +GL     VE AL+LF+E Q   
Sbjct: 296 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN+ + GLC  G I+ A ++   +    C   I+ Y+ +I+GLCK+G +  A 
Sbjct: 356 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +       G +P+V T+N +I G+C   ++D A  L   M   G+AP+ +T+N+++ G 
Sbjct: 416 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 475

Query: 241 IRNNETSKVVELLHRM 256
            +  + ++V E    M
Sbjct: 476 CKAGKVNEVNETFQEM 491



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 128/269 (47%), Gaps = 32/269 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLT---------------------------- 33
           D+A ++   M+  GV P+   ++  +  FCLT                            
Sbjct: 102 DQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGL 161

Query: 34  ---GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
              G    AR+LF  M       N+  +N +++  CK  DV E+  L  +++ +G+   +
Sbjct: 162 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINL 221

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            TYN    GL E  ++  A++L D M+   V  +  TYNT I GLCK     EA    R 
Sbjct: 222 FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRR 280

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C      Y+ +IDG CKI  ++ A EL +     G +P+ VTY  +I+G C +G 
Sbjct: 281 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 340

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +++A +LF + +AKG+ P+ V +N+L+ G
Sbjct: 341 VERALELFNEAQAKGIKPDIVVYNSLVKG 369



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 127/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ +++  I +G  P+ F ++TLIDG+C   ++D A +L   M   G   + +TYN+
Sbjct: 411 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 470

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK   V E    + EM+ KG  P  +TYN L       +++E A K+  +M    
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++NT I G C+NG +  A  LF+ L         + ++ LI        +  A 
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 590

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   G   +  TY ++I G C    +D+A+   ++M  KG  P+  TF  ++   
Sbjct: 591 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 650

Query: 241 IRNNETSKVVELLHRM 256
             N+   + V ++H M
Sbjct: 651 TVNHRVFQAVGIIHIM 666



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L D M+   V PN   ++ ++   C  G++  A  L   +   G   N+ TYN  I
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+   + E++ L   M +  + P VVTYNTL  GL +    + A+     M +    
Sbjct: 229 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT IDG CK   + EA EL +             Y  LI+GLC  G +E A EL
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F      G+ P++V YN ++ G C  G +  A  +  +M  +G  P+  T+N ++ G
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 116/231 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L++ M + G+ P+   Y+++++G C  G+++   E F  M + GC  N +TYN 
Sbjct: 446 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 505

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C++  +EE+  +  +M  +G+ P  V++NTL +G      +E A  LF +++   
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +A   T+NT I        +  A ++F  +           Y  LIDG CK   ++ A+
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 625

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
                + + G +P++ T+  +I+    + ++ +A  +   M   GV P  V
Sbjct: 626 MHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 5/236 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P A  Y+ ++D        D+A +++V M   G   ++ T+   +  +C T     +L L
Sbjct: 83  PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 142

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
              +  +G     V Y T+  GL+       A +LFD+M H+ V    + +N  +  LCK
Sbjct: 143 LRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCK 198

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G ++EA  L   +      + +  Y+  I GLC+ G+L  A  L   + R   +P+VVT
Sbjct: 199 RGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVT 257

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           YN +I G C      +A      M  +G  P+  T+NT++ G  + +   +  ELL
Sbjct: 258 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 313



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 4/199 (2%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y   I  Y +   + ++++ +  M      P    YN +   L +    + A K++  M 
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            + V+ +  T+   +   C       A  L R L       G  AY  ++ GL   G   
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALP----HRGAVAYCTVVCGLYAHGHTH 168

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF  +    + PN+  +N ++H  C  G + +A  L   +  +G++ N  T+N  +
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 238 LGCIRNNETSKVVELLHRM 256
            G        + V L+  M
Sbjct: 229 RGLCEAGRLPEAVRLVDGM 247



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 4/155 (2%)

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           ++  A+  F+ M           YN  +D L    Y  +A +++  +        +  ++
Sbjct: 65  RLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHT 124

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
             +   C   +   A  L ++LP  G     V Y  ++ G    G    A  LF  M   
Sbjct: 125 IRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHT 180

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            V PN   FN ++    +  +  +   LL ++ +R
Sbjct: 181 HVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 215


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 135/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N V + T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++    L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 130/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +      + T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+    L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + + H L  +M  KG+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   +M + N
Sbjct: 325 DGCCKEGDLDTAFEHRKQMIQEN 347



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 115/244 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 129 FYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +V  L+  M
Sbjct: 249 IFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEM 308

Query: 257 DERN 260
             + 
Sbjct: 309 SMKG 312


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 138/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    D ++  G + N   Y TLIDG C  GE   A +L   +D      NVV Y+T+I
Sbjct: 175 QALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTII 234

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK K V ++ +LYSEM+SKGI P VVTY+ L  G F + +++ A+ LF++M   ++ 
Sbjct: 235 DGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIK 294

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +D  CK+G I  A +L   +        I  YS ++D LCK  +++ A  L
Sbjct: 295 PDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVAL 354

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L   G+ PN+ TY I+I G C  G+++ A ++F D+  KG     VT+  +  G  +
Sbjct: 355 LTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCK 414

Query: 243 NNETSKVVELLHRMDE 258
                +   LL +M+E
Sbjct: 415 KGLFDEASALLSKMEE 430



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 129/246 (52%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           RG++PN    + LI+ FC  G I  A  +F  +   G   N +T+ TLI G C    + +
Sbjct: 116 RGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQ 175

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +LN + ++++ G +   ++Y TL  GL ++ +   AL L   +    V      Y+T ID
Sbjct: 176 ALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIID 235

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G+CK+ ++ +A +L+  +        +  YS LI G   +GKL+ A +LF  +    + P
Sbjct: 236 GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKP 295

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +V T+NI++  FC  G++  A  L  +M  +G  PN VT+++++    + +   K V LL
Sbjct: 296 DVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALL 355

Query: 254 HRMDER 259
            ++ ++
Sbjct: 356 TKLKDQ 361



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 131/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + ++++   P A  ++ ++     +        L   M+  G   N+V  N 
Sbjct: 68  VDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNI 127

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  + ++++++L  G  P  +T+ TL  GL    Q+  AL   D++    
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y T IDGLCK G    A +L R +     +  +  YS +IDG+CK   +  A+
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G+ PNVVTY+ +I GF   G++  A DLF  M ++ + P+  TFN L+   
Sbjct: 248 DLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVF 307

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ + S  ++L+  M +R
Sbjct: 308 CKSGKISYALKLVDEMHDR 326



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 111/222 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+ +G+ PN   YS LI GF   G++  A +LF  M       +V T+N 
Sbjct: 243 VNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNI 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +CK+  +  +L L  EM  +G  P +VTY+++   L + H+V+ A+ L  +++   
Sbjct: 303 LVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQG 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   IDGLC +G + +A  +F  L V   ++ +  Y  +  G CK G  + A 
Sbjct: 363 IRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEAS 422

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
            L   +   G +P+  TY ++       G+ D A  L  + E
Sbjct: 423 ALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECE 464



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 116/242 (47%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   YS+    F    ++D A  LF  +         + +N ++    K+K     L L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M  +GI+P +V  N L +   ++  +  A  +F ++        T T+ T I GLC  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G I +A      L  L  +    +Y  LIDGLCK+G+   A +L + +    + PNVV Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + +I G C D  ++ A DL+ +M +KG++PN VT++ L+ G     +    V+L ++M  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 259 RN 260
            N
Sbjct: 291 EN 292


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 137/254 (53%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +L++ M  +G++PN + Y+ +I   C TG++  A  +   M   G   + V Y TLI+G+
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK  +V  +  L+ EM  + I P  +TY  +  GL +  +V  A KLF EM    +  + 
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY   IDG CK G + EA  L   +  +     I  Y+ L DGLCK G+++TA EL   
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + R GL  N+ TYN +++G C  G +D+A  L  DME  G  P+ VT+ TLM    ++ E
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 246 TSKVVELLHRMDER 259
             +  ELL +M +R
Sbjct: 449 MVRAHELLRQMLDR 462



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 135/245 (55%), Gaps = 1/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A RL D M +R + P+   Y+ +I G C TG +  A +LF  M       + VTY  
Sbjct: 274 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK   ++E+ +L+++ML  G+ P +VTY  L  GL +  +V+ A +L  EM    
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ ++GLCK G I +A +L + + V         Y+ L+D  CK  ++  A 
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
           EL + +    L P VVT+N++++GFC  G ++    L   M  KG+ PN  T+N+L+   
Sbjct: 454 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 513

Query: 240 CIRNN 244
           CIRNN
Sbjct: 514 CIRNN 518



 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 124/237 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+L  MI  G+ P+  +Y+TLIDGFC  G +  A  LF  M       + +TY  +I
Sbjct: 241 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 300

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+T  V E+  L+ EM+ K + P  VTY  L  G  +  +++ A  L ++M    + 
Sbjct: 301 CGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLT 360

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY    DGLCK G +  A EL   +     EL I  Y+ L++GLCK G ++ A +L
Sbjct: 361 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 420

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +   G  P+ VTY  ++  +C   +M +AH+L   M  + + P  VTFN LM G
Sbjct: 421 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 477



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 139/261 (53%), Gaps = 7/261 (2%)

Query: 4   ASRLLDLMIQRGV-----RPNAFV--YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV 56
           A +L D M+  G+       N F+   S  +DG  +  + +   +L   M I G   N  
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           TYN +I   CKT  V E+  +  EM+S+GI P  V Y TL  G  ++  V  A +LFDEM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           Q   ++ +  TY   I GLC+ G ++EA +LF  +   + E     Y+ LIDG CK GK+
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A+ L   + ++GL PN+VTY  +  G C  G++D A++L  +M  KG+  N  T+N+L
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 237 MLGCIRNNETSKVVELLHRMD 257
           + G  +     + V+L+  M+
Sbjct: 405 VNGLCKAGNIDQAVKLMKDME 425



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 3/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M+ + + P+   Y+ LIDG+C  G++  A  L   M   G   N+VTY  L 
Sbjct: 311 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 370

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  +V+ +  L  EM  KG+   + TYN+L +GL +   ++ A+KL  +M+ +   
Sbjct: 371 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 430

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T +D  CK+  +V A EL R +   + +  +  ++ L++G C  G LE   +L
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI 241
            + +   G+MPN  TYN +I  +C    M    +++  M AKGV P+  T+N L+ G C 
Sbjct: 491 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 550

Query: 242 RNNETSKVVELLHR 255
             N   K    LHR
Sbjct: 551 ARN--MKEAWFLHR 562



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  L + M+Q G+ PN   Y+ L DG C  GE+D A EL   M   G   N+ TYN+
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK  ++++++ L  +M   G  P  VTY TL     +  ++  A +L  +M   +
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+N  ++G C +G + +  +L + +           Y+ LI   C    +    
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+++ +   G++P+  TYNI+I G C    M +A  L  DM  KG      ++N L+ G 
Sbjct: 524 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 583

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  EL  +M
Sbjct: 584 YKRKKFLEARELFEQM 599



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 8/238 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LL  M ++G+  N + Y++L++G C  G ID+A +L   M++ G   + VTY T
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ YCK++++  +  L  +ML + ++PTVVT+N L +G      +E   KL   M    
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKL 176
           +    +TYN+ I   C    +    E++R +    C  G+      Y+ LI G CK   +
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGM----CAKGVVPDGNTYNILIKGHCKARNM 554

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           + AW L + +   G    V +YN +I GF    +  +A +LF  M  +G+  +   +N
Sbjct: 555 KEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 612



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 107/212 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +L+  M   G  P+A  Y+TL+D +C + E+ RA EL   M        VVT+N 
Sbjct: 414 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 473

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C +  +E+   L   ML KGI P   TYN+L       + +    +++  M    
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 533

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  + +TYN  I G CK   + EA  L R +      L + +Y+ LI G  K  K   A 
Sbjct: 534 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 593

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           ELF+ + R GL+ +   YNI      ++G+M+
Sbjct: 594 ELFEQMRREGLVADREIYNIFADINYDEGKME 625



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 50/197 (25%)

Query: 106 VEHALKLFD------------------------------------------EMQHSDVAA 123
           V  A KLFD                                          EMQ   +  
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETA 179
              TYN  I  LCK G + EA    R LR +  E GI      Y+ LIDG CK+G + +A
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAE---RVLREMISE-GIAPDGVIYTTLIDGFCKLGNVSSA 277

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + LF  + +  + P+ +TY  +I G C  G++ +A  LF +M  K + P+ VT+  L+ G
Sbjct: 278 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 337

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  +   L ++M
Sbjct: 338 YCKEGKMKEAFSLHNQM 354



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 53/110 (48%)

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           + V  C L I   S  +DG+    K E   +L + +   GL PN  TYN +I   C  G+
Sbjct: 179 ISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK 238

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + +A  +  +M ++G+AP+ V + TL+ G  +    S    L   M +R 
Sbjct: 239 VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 288


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 149/292 (51%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M+ +G  P+ F Y+T+IDG+C    +  A EL       G + + VTY +LI
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C   DVE +L L++E  +KGI+P +V YN+L  GL     + HAL++ +EM      
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393

Query: 123 AETSTYNTFIDGLCKNGYIVEAAEL---------------FRTL-----RVLK------- 155
            +  TYN  I+GLCK G I +A  +               F TL     + LK       
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453

Query: 156 ----CELGIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                E GI      Y+ +++GLCK GK+    E FQ +   G  PN +TYNI+I  FC 
Sbjct: 454 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 513

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +M++A  + + M  +G+ P+ V+FNTL+ G  RN +      L  +++E+
Sbjct: 514 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 138/237 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L +    +G++P+  VY++L+ G CL G I  A ++   M   GC  ++ TYN 
Sbjct: 342 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 401

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++ ++  + ++ + KG  P V T+NTL  G  +  +++ AL+L + M    
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +T TYN+ ++GLCK G + E  E F+ + +  C      Y+ LI+  C+  K+E A 
Sbjct: 462 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 521

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++   + + GL P+ V++N +I+GFC +G ++ A+ LF  +E KG +    TFNTL+
Sbjct: 522 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 578



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA RL+D M    V P+   Y+TLI G C       A      M   GC+ +  TYNT
Sbjct: 238 LPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK   V+E+  L  + + KG  P  VTY +L +GL     VE AL+LF+E Q   
Sbjct: 297 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 356

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN+ + GLC  G I+ A ++   +    C   I+ Y+ +I+GLCK+G +  A 
Sbjct: 357 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 416

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +       G +P+V T+N +I G+C   ++D A  L   M   G+AP+ +T+N+++ G 
Sbjct: 417 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 476

Query: 241 IRNNETSKVVELLHRM 256
            +  + ++V E    M
Sbjct: 477 CKAGKVNEVNETFQEM 492



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 128/269 (47%), Gaps = 32/269 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLT---------------------------- 33
           D+A ++   M+  GV P+   ++  +  FCLT                            
Sbjct: 103 DQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGL 162

Query: 34  ---GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
              G    AR+LF  M       N+  +N +++  CK  DV E+  L  +++ +G+   +
Sbjct: 163 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINL 222

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            TYN    GL E  ++  A++L D M+   V  +  TYNT I GLCK     EA    R 
Sbjct: 223 FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRR 281

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C      Y+ +IDG CKI  ++ A EL +     G +P+ VTY  +I+G C +G 
Sbjct: 282 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 341

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +++A +LF + +AKG+ P+ V +N+L+ G
Sbjct: 342 VERALELFNEAQAKGIKPDIVVYNSLVKG 370



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 127/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ +++  I +G  P+ F ++TLIDG+C   ++D A +L   M   G   + +TYN+
Sbjct: 412 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 471

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK   V E    + EM+ KG  P  +TYN L       +++E A K+  +M    
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++NT I G C+NG +  A  LF+ L         + ++ LI        +  A 
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 591

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   G   +  TY ++I G C    +D+A+   ++M  KG  P+  TF  ++   
Sbjct: 592 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 651

Query: 241 IRNNETSKVVELLHRM 256
             N+   + V ++H M
Sbjct: 652 TVNHRVFQAVGIIHIM 667



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L D M+   V PN   ++ ++   C  G++  A  L   +   G   N+ TYN  I
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+   + E++ L   M +  + P VVTYNTL  GL +    + A+     M +    
Sbjct: 230 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT IDG CK   + EA EL +             Y  LI+GLC  G +E A EL
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F      G+ P++V YN ++ G C  G +  A  +  +M  +G  P+  T+N ++ G
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 116/231 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L++ M + G+ P+   Y+++++G C  G+++   E F  M + GC  N +TYN 
Sbjct: 447 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 506

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C++  +EE+  +  +M  +G+ P  V++NTL +G      +E A  LF +++   
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +A   T+NT I        +  A ++F  +           Y  LIDG CK   ++ A+
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 626

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
                + + G +P++ T+  +I+    + ++ +A  +   M   GV P  V
Sbjct: 627 MHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 5/236 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P A  Y+ ++D        D+A +++V M   G   ++ T+   +  +C T     +L L
Sbjct: 84  PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 143

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
              +  +G     V Y T+  GL+       A +LFD+M H+ V    + +N  +  LCK
Sbjct: 144 LRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCK 199

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G ++EA  L   +      + +  Y+  I GLC+ G+L  A  L   + R   +P+VVT
Sbjct: 200 RGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVT 258

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           YN +I G C      +A      M  +G  P+  T+NT++ G  + +   +  ELL
Sbjct: 259 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 314



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 4/199 (2%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y   I  Y +   + ++++ +  M      P    YN +   L +    + A K++  M 
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            + V+ +  T+   +   C       A  L R L       G  AY  ++ GL   G   
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALP----HRGAVAYCTVVCGLYAHGHTH 169

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF  +    + PN+  +N ++H  C  G + +A  L   +  +G++ N  T+N  +
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 238 LGCIRNNETSKVVELLHRM 256
            G        + V L+  M
Sbjct: 230 RGLCEAGRLPEAVRLVDGM 248



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 4/155 (2%)

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           ++  A+  F+ M           YN  +D L    Y  +A +++  +        +  ++
Sbjct: 66  RLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHT 125

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
             +   C   +   A  L ++LP  G     V Y  ++ G    G    A  LF  M   
Sbjct: 126 IRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHT 181

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            V PN   FN ++    +  +  +   LL ++ +R
Sbjct: 182 HVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 216


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 140/259 (54%), Gaps = 3/259 (1%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           E  +  DL+++    G  PN  +Y+TLIDG C  GEI++A++LF  M   G + N  TY 
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+G  K    ++   +Y +M   G+ P + TYN + + L +  + + A K+FDEM+  
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRER 297

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V+    TYNT I GLC+     EA ++   ++       +  Y+ LIDG C +GKL  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKA 357

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L + L   GL P++VTYN+++ GFC  G    A  +  +ME +G+ P+ VT+  L+  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417

Query: 240 CIRNNETSKVVELLHRMDE 258
             R++     ++L   M+E
Sbjct: 418 FARSDNMETAIQLRSSMEE 436



 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 137/253 (54%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + + M + GV PN + Y+ +++  C  G    A ++F  M   G   N+VTYNTLI G C
Sbjct: 255 MYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +     E+  +  +M S  I P ++TYNTL  G   + ++  AL L  +++   ++    
Sbjct: 315 REMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLV 374

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  + G C+ G    AA++ + +     +     Y+ LID   +   +ETA +L  S+
Sbjct: 375 TYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSM 434

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL+P+V TY+++IHGFC  GQM++A  LF  M  K + PN V +NT++LG  +   +
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSS 494

Query: 247 SKVVELLHRMDER 259
            + + L   M+E+
Sbjct: 495 YRALRLFRDMEEK 507



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 137/241 (56%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + + +  +I G C  GEI+++ +L V +   G   NVV Y TLI+G CK  ++E++ +L+
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM   G+     TY  L HGLF+    +   +++++MQ   V     TYN  ++ LCK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G   +A ++F  +R       I  Y+ LI GLC+  K   A ++   +    + PN++TY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I GFC+ G++ KA  L  D++++G++P+ VT+N L+ G  R  +TS   +++  M+E
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401

Query: 259 R 259
           R
Sbjct: 402 R 402



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 132/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++ D M +RGV  N   Y+TLI G C   + + A ++   M       N++TYNTLI
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLI 345

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C    + ++L+L  ++ S+G+ P++VTYN L  G         A K+  EM+   + 
Sbjct: 346 DGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIK 405

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   ID   ++  +  A +L  ++  L     +  YS LI G C  G++  A  L
Sbjct: 406 PSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+S+    L PN V YN MI G+C +G   +A  LF DME K +APN  +++ L+    +
Sbjct: 466 FKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCK 525

Query: 243 NNETSKVVELLHRM 256
             +  +  +L+ +M
Sbjct: 526 ERKLKEAEDLVEKM 539



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 119/228 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA++++D M    + PN   Y+TLIDGFC  G++ +A  L   +   G   ++VTYN L
Sbjct: 320 NEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVL 379

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G+C+  D   +  +  EM  +GI+P+ VTY  L         +E A++L   M+   +
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGL 439

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+  I G C  G + EA+ LF+++     E     Y+ +I G CK G    A  
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALR 499

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LF+ +    L PNV +Y+ +I   C + ++ +A DL   M   G+ P+
Sbjct: 500 LFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  +IN Y +++ ++ S+  ++EM+ KG  P    +N L   +            F+E +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  +  ++   I G C+ G I ++ +L   LR       +  Y+ LIDG CK G++E
Sbjct: 157 -IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF  + + GL+ N  TY ++IHG   +G   +  +++  M+  GV PN  T+N +M
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 238 LGCIRNNETSKVVELLHRMDER 259
               ++  T    ++   M ER
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRER 297



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A +L   M + G+ P+   YS LI GFC+ G+++ A  LF SM       N V YNT
Sbjct: 424 METAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNT 483

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYCK      +L L+ +M  K + P V +Y+ L   L +  +++ A  L ++M  S 
Sbjct: 484 MILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSG 543

Query: 121 V 121
           +
Sbjct: 544 I 544



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 53/89 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EASRL   M+++ + PN  +Y+T+I G+C  G   RA  LF  M+      NV +Y+ 
Sbjct: 459 MNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSY 518

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPT 89
           LI   CK + ++E+ +L  +M+  GI P+
Sbjct: 519 LIRVLCKERKLKEAEDLVEKMIDSGIDPS 547


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA +L D MI+RG +P+ F ++  +  +C  G+++    L   M   G   ++VTY T
Sbjct: 508 MDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGT 567

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK KD+ ++    +E++  G+RP  V YN L  G      +  A+ + D M+++ 
Sbjct: 568 IIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNG 627

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN+ +  +C  G + E   +F    V   ELG+  Y+ +I G CKIGK++ A 
Sbjct: 628 IQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAV 687

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +   G+ PN +TY  ++  +   G  ++A  LF +M + G+ P+ V++NTL+ G 
Sbjct: 688 MYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747

Query: 241 IRNNETSKVVELLHRMDER 259
              +   K+VE    M  +
Sbjct: 748 CEVDSLDKMVESPAEMSSQ 766



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 140/301 (46%), Gaps = 53/301 (17%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RL   M++  VRP+   +  LI G     +      +   M   G   N V YN 
Sbjct: 262 VEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNE 321

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I  +C+     E+L L+ EM+SKGI+ TVVTYN +   L +  ++EHA K+ DEM  + 
Sbjct: 322 MIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAG 381

Query: 121 VAAETSTYNTF------------------------------------IDGLCKNGYIVEA 144
           +    S +N+                                     I  LCK+G   EA
Sbjct: 382 MMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEA 441

Query: 145 AELFRTLRVLKCELGIEAYS--CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           AE++   +VL   LG+   +   LI GLC+   ++ A ++ +++   G+  + +TYNIMI
Sbjct: 442 AEIW--FQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMI 499

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM-----LGCIRNNETSKVVELLHRMD 257
            G C   +MD+A  L  DM  +G  P+  TFN  +     LG        KV E+LH +D
Sbjct: 500 QGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLG--------KVEEILHLLD 551

Query: 258 E 258
           +
Sbjct: 552 Q 552



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 119/237 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   RL+  M+ R ++PN  + +  I   C +G+ + A E++  +   G   NV T N 
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNA 462

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+  +++E+  +   M++ G+    +TYN +  G  +  +++ A++L D+M    
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+N F+   C  G + E   L   ++    +  I  Y  +IDG CK   +  A 
Sbjct: 523 FKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKAN 582

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E    L + GL PN V YN +I G+  +G +  A  +   M+  G+ P  VT+N+LM
Sbjct: 583 EYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLM 639



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 36/291 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA +L D M+ +G++     Y+ +    C  GE++ A ++   M + G M +   +N++
Sbjct: 333 SEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSV 392

Query: 62  INGY------------------------------------CKTKDVEESLNLYSEMLSKG 85
           +  +                                    CK+   EE+  ++ ++L KG
Sbjct: 393 VAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG 452

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           +   V T N L HGL + + ++ A K+   M +S V  +  TYN  I G CK   + EA 
Sbjct: 453 LGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAI 512

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L   +     +  +  ++  +   C +GK+E    L   +   GL P++VTY  +I G+
Sbjct: 513 QLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGY 572

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C    M KA++   ++   G+ PN V +N L+ G  RN   S  + +L  M
Sbjct: 573 CKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTM 623



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 36/279 (12%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           + V P+   Y+ +I   C  GEID A  +   +  +G    VVTYN L++  CK+  VEE
Sbjct: 205 KTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEE 264

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +  L   M+   +RP++VT+  L  GL    Q      +  EMQ   +      YN  I 
Sbjct: 265 AFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIG 324

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM- 192
             C+ G+  EA +LF  +     +  +  Y+ +   LCK G++E A ++   +   G+M 
Sbjct: 325 WHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384

Query: 193 -----------------------------------PNVVTYNIMIHGFCNDGQMDKAHDL 217
                                              PN       I   C  G+ ++A ++
Sbjct: 385 HCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEI 444

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +  +  KG+  N  T N L+ G  + N   +  ++L  M
Sbjct: 445 WFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAM 483



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 1/188 (0%)

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTY 128
            +  + + + E+ ++G  P++ T + L   L    Q++ A K+F EM+    VA +  TY
Sbjct: 155 SLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTY 214

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              I  LC+ G I  A  +   LR    +  +  Y+ L+D LCK G++E A+ L   +  
Sbjct: 215 TAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVE 274

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             + P++VT+ I+I G     Q  +   +  +M+  G+ PN V +N ++    R    S+
Sbjct: 275 GRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSE 334

Query: 249 VVELLHRM 256
            ++L   M
Sbjct: 335 ALKLFDEM 342



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 63/113 (55%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ +I GFC  G+ID A   F  M   G   N +TY TL+  Y K+ + EE+  L+ EM+
Sbjct: 670 YTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMV 729

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           S GI P  V+YNTL  G  E+  ++  ++   EM    +  +  +YN F+DG+
Sbjct: 730 SLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG--LMPNVV 196
           G +  AA+ F  L        I+  S L++ L   G+L+ A ++F  + R G  + P+V 
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVH 212

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  MI   C  G++D A  +  ++   G+ P  VT+N LM    ++    +   L  RM
Sbjct: 213 TYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272

Query: 257 DE 258
            E
Sbjct: 273 VE 274


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 137/257 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A+R++  M +R + P+ F ++ LID     G I  A EL+  M       ++VTY+ L
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C    ++E+  ++  M+SKG  P VVTY+ L +G  +  +VEH +KLF EM    V
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T TY   I G C+ G +  A E+F+ +        I  Y+ L+ GLC  GK+E A  
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALV 417

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   + + G+  ++VTYNI+I G C  G++  A DL+  +  KG+ P+  T+  +MLG  
Sbjct: 418 ILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLY 477

Query: 242 RNNETSKVVELLHRMDE 258
           +     +   L  +M E
Sbjct: 478 KKGLRGEADALFRKMKE 494



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 142/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + D M++ G  PN  +Y+T+IDG C + ++D A +L   M+++G   + VTYN+LI
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C +   +++  + S M  + I P V T+N L     +  ++  A +L++EM    + 
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  I GLC    + EA ++F  +    C   +  YS LI+G CK  K+E   +L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + + G++ N VTY ++I G+C  G+++ A ++F  M   GV PN +T+N L+ G   
Sbjct: 349 FCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCD 408

Query: 243 NNETSKVVELLHRMDE 258
           N +  K + +L  M +
Sbjct: 409 NGKIEKALVILADMQK 424



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 122/229 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + MI+R + P+   YS LI G C+   +D A ++F  M   GC  +VVTY+ 
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSI 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK+K VE  + L+ EM  +G+    VTY  L  G     ++  A ++F  M    
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCG 391

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  + GLC NG I +A  +   ++    +  I  Y+ +I G+CK G++  AW
Sbjct: 392 VPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAW 451

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           +L+ SL   GL P++ TY  M+ G    G   +A  LF  M+  G+ PN
Sbjct: 452 DLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 134/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A   L  M++ G  P+   + +L++GFC    I  A  +F  M   G   NVV YNT+I+
Sbjct: 135 ALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIID 194

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK+K V+ +L+L + M   GIRP  VTYN+L  GL    + + A ++   M   ++  
Sbjct: 195 GLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYP 254

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+N  ID   K G I EA EL+  +     +  I  YS LI GLC   +L+ A ++F
Sbjct: 255 DVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMF 314

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G  P+VVTY+I+I+G+C   +++    LF +M  +GV  N VT+  L+ G  R 
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRA 374

Query: 244 NETSKVVELLHRM 256
            + +   E+   M
Sbjct: 375 GKLNVAEEIFKWM 387



 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 136/253 (53%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M   G+  N    + L++ FC   ++  A      M   G   ++VT+ +L+NG+C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFC 162

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   + ++L ++  M+  G  P VV YNT+  GL +  QV++AL L + M+   +  +  
Sbjct: 163 RGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAV 222

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN+ I GLC +G   +A  +   +   +    +  ++ LID   K G++  A EL++ +
Sbjct: 223 TYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEM 282

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R  L P++VTY+++I+G C   ++D+A  +F  M +KG  P+ VT++ L+ G  ++ + 
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342

Query: 247 SKVVELLHRMDER 259
              ++L   M +R
Sbjct: 343 EHGMKLFCEMSQR 355



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 109/226 (48%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           ++D + +LF  M     + ++  ++ L++   K K  +  + L+ +M   GI   + T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            L +      Q+  AL    +M       +  T+ + ++G C+   I +A  +F  +  +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             E  +  Y+ +IDGLCK  +++ A +L   +   G+ P+ VTYN +I G CN G+ D A
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +   M  + + P+  TFN L+  C++    S+  EL   M  R+
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS 286



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 96/202 (47%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  ++    +   +++SL+L+  M+     P++  ++ L   + ++ + +  + L+++MQ
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +     T N  ++  C+   +  A      +  L  E  I  +  L++G C+  ++ 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +F  +  +G  PNVV YN +I G C   Q+D A DL   ME  G+ P+ VT+N+L+
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 238 LGCIRNNETSKVVELLHRMDER 259
            G   +        ++  M +R
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKR 250


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 138/252 (54%), Gaps = 3/252 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK--- 67
           MI+R +  N   ++  I+G C  G++++A +    M   G   NVVTYNTL++GYCK   
Sbjct: 191 MIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS 250

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              + ++     EML+  I P  VT+NTL  G  +   V  A K F+EMQ   +     T
Sbjct: 251 AGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVT 310

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN+ I+GLC NG + EA +L+  +  L  +  I  Y+ LI+G CK   ++ A ++F  + 
Sbjct: 311 YNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVS 370

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           +  L+PNV+T+N MI  +C +G M++   L   M  +G+ PN  T+N L+ G  R  +  
Sbjct: 371 KQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQ 430

Query: 248 KVVELLHRMDER 259
              ELL+ M+ +
Sbjct: 431 AAKELLNEMENK 442



 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 145/259 (55%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCL---TGEIDRARELFVSMDINGCMHNVVT 57
           +++A   ++ M   G+ PN   Y+TL+DG+C     G++ +A      M  N    N VT
Sbjct: 216 LNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVT 275

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +NTLI+G+CK ++V  +   + EM  +G++P +VTYN+L +GL    ++E A+ L+D+M 
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +     TYN  I+G CK   + EA ++F  +   +    +  ++ +ID  CK G +E
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             + L  S+   G++PNV TYN +I G C    +  A +L  +ME KG+  + VT+N L+
Sbjct: 396 EGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 455

Query: 238 LGCIRNNETSKVVELLHRM 256
            G  +N+++    +LL+ M
Sbjct: 456 DGLCKNDKSRNAEKLLNEM 474



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 134/238 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D M+  G++PN   Y+ LI+GFC    +  A ++F  +     + NV+T+NT
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNT 383

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ YCK   +EE  +L S ML +GI P V TYN L  GL     ++ A +L +EM++  
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  IDGLCKN     A +L   +  L  +     Y+ L+DG C  GKL+ A 
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            +   + +    PNVVTYN++I G+C   +++ A+ L  +M  KG+ PN  T++ + L
Sbjct: 504 NVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRL 561



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 139/256 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +  + M ++G++PN   Y++LI+G C  G+++ A +L+  M   G   N+VTYN LIN
Sbjct: 292 AKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALIN 351

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K ++E+  ++ ++  + + P V+T+NT+     +   +E    L   M    +  
Sbjct: 352 GFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILP 411

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             STYN  I GLC+   +  A EL   +     +  +  Y+ LIDGLCK  K   A +L 
Sbjct: 412 NVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLL 471

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +  +GL PN VTYN ++ G+C +G++  A ++   ME +   PN VT+N L+ G  + 
Sbjct: 472 NEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKI 531

Query: 244 NETSKVVELLHRMDER 259
           N+      LL+ M E+
Sbjct: 532 NKLEAANGLLNEMLEK 547



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 118/233 (50%), Gaps = 11/233 (4%)

Query: 15  GVRP--NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           G RP   A +   L+  +    E+  A E F      G   ++ + N L++   K   + 
Sbjct: 123 GGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIG 182

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           +   +Y EM+ + I   + T+N   +GL    ++  A    ++M+   ++    TYNT +
Sbjct: 183 DVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLV 242

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIE------AYSCLIDGLCKIGKLETAWELFQSL 186
           DG CK G    A ++++    +K  L  +       ++ LIDG CK   +  A + F+ +
Sbjct: 243 DGYCKRG---SAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEM 299

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + GL PN+VTYN +I+G CN+G++++A DL+  M   G+ PN VT+N L+ G
Sbjct: 300 QKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 5/189 (2%)

Query: 76  NLYSEMLSKGIRP--TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +++  +L  G RP  T +  + L     +  ++  A + F   +        ++ N  + 
Sbjct: 114 SVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLS 173

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            L K   I +   +++ +   +    +  ++  I+GLC+ GKL  A +  + +   G+ P
Sbjct: 174 ALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISP 233

Query: 194 NVVTYNIMIHGFC---NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           NVVTYN ++ G+C   + G+M KA     +M A  + PN VTFNTL+ G  ++   +   
Sbjct: 234 NVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAK 293

Query: 251 ELLHRMDER 259
           +    M ++
Sbjct: 294 KAFEEMQKQ 302


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 133/232 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G++  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G AP+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G +D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 129/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++   G   +VV++NTL+NGY K  +++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +   G+RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +        E   RM + N
Sbjct: 319 DGSCKEGHLETAFEYRKRMIKEN 341



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 115/238 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + +V+S LI  +  +G +  A E +     +       T   ++    K K  +     Y
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN VT+
Sbjct: 185 GNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L   M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 149/293 (50%), Gaps = 35/293 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA   L  M+ +G  P+ F Y+T+IDG+C    +  A EL       G + + VTY +L
Sbjct: 275 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 334

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING C   DVE +L L++E  +KGI+P +V YN+L  GL     + HAL++ +EM     
Sbjct: 335 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 394

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTL-----RVLKCELGIE 161
             +  TYN  I+GLCK G I +A  +               F TL     + LK +  ++
Sbjct: 395 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 454

Query: 162 ---------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           Y+ +++GLCK GK+    E FQ +   G  PN +TYNI+I  FC
Sbjct: 455 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFC 514

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              +M++A  + + M  +G+ P+ V+FNTL+ G  RN +      L  +++E+
Sbjct: 515 RSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 138/237 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L +    +G++P+  VY++L+ G CL G I  A ++   M   GC  ++ TYN 
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++ ++  + ++ + KG  P V T+NTL  G  +  +++ AL+L + M    
Sbjct: 404 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +T TYN+ ++GLCK G + E  E F+ + +  C      Y+ LI+  C+  K+E A 
Sbjct: 464 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 523

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++   + + GL P+ V++N +I+GFC +G ++ A+ LF  +E KG +    TFNTL+
Sbjct: 524 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 580



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA RL+D M    V P+   Y+TLI G C       A      M   GC+ +  TYNT
Sbjct: 240 LPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNT 298

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK   V+E+  L  + + KG  P  VTY +L +GL     VE AL+LF+E Q   
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN+ + GLC  G I+ A ++   +    C   I+ Y+ +I+GLCK+G +  A 
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +       G +P+V T+N +I G+C   ++D A  L   M   G+AP+ +T+N+++ G 
Sbjct: 419 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 478

Query: 241 IRNNETSKVVELLHRM 256
            +  + ++V E    M
Sbjct: 479 CKAGKVNEVNETFQEM 494



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLT---------------------------- 33
           D+A ++   M+  GV P+   ++  +  FCLT                            
Sbjct: 105 DQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGL 164

Query: 34  ---GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
              G    AR+LF  M       N+  +N +++  CK  DV E+  L  +++ +G+   +
Sbjct: 165 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINL 224

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            TYN    GL E  ++  A++L D M+   V  +  TYNT I GLCK     EA    R 
Sbjct: 225 FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRR 283

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C      Y+ +IDG CKI  ++ A EL +     G +P+ VTY  +I+G C +G 
Sbjct: 284 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 343

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +++A +LF + +AKG+ P+ V +N+L+ G          +++++ M E
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 391



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 127/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ +++  I +G  P+ F ++TLIDG+C   ++D A +L   M   G   + +TYN+
Sbjct: 414 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 473

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK   V E    + EM+ KG  P  +TYN L       +++E A K+  +M    
Sbjct: 474 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 533

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++NT I G C+NG +  A  LF+ L         + ++ LI        +  A 
Sbjct: 534 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE 593

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   G   +  TY ++I G C    +D+A+   ++M  KG  P+  TF  ++   
Sbjct: 594 KIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 653

Query: 241 IRNNETSKVVELLHRM 256
             N+   + V ++H M
Sbjct: 654 TVNHRVFQAVGIIHIM 669



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L D M+   V PN   ++ ++   C  G++  A  L   +   G   N+ TYN  I
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+   + E++ L   M +  + P VVTYNTL  GL +    + A+     M +    
Sbjct: 232 RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT IDG CK   + EA EL +             Y  LI+GLC  G +E A EL
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F      G+ P++V YN ++ G C  G +  A  +  +M  +G  P+  T+N ++ G
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 116/231 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L++ M + G+ P+   Y+++++G C  G+++   E F  M + GC  N +TYN 
Sbjct: 449 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C++  +EE+  +  +M  +G+ P  V++NTL +G      +E A  LF +++   
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +A   T+NT I        +  A ++F  +           Y  LIDG CK   ++ A+
Sbjct: 569 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 628

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
                + + G +P++ T+  +I+    + ++ +A  +   M   GV P  V
Sbjct: 629 MHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 5/236 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P A  Y+ ++D        D+A +++V M   G   ++ T+   +  +C T     +L L
Sbjct: 86  PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 145

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
              +  +G     V Y T+  GL+       A +LFD+M H+ V    + +N  +  LCK
Sbjct: 146 LRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCK 201

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G ++EA  L   +      + +  Y+  I GLC+ G+L  A  L   + R   +P+VVT
Sbjct: 202 RGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVT 260

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           YN +I G C      +A      M  +G  P+  T+NT++ G  + +   +  ELL
Sbjct: 261 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 316



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 4/199 (2%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y   I  Y +   + ++++ +  M      P    YN +   L +    + A K++  M 
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            + V+ +  T+   +   C       A  L R L       G  AY  ++ GL   G   
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALP----HRGAVAYCTVVCGLYAHGHTH 171

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF  +    + PN+  +N ++H  C  G + +A  L   +  +G++ N  T+N  +
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231

Query: 238 LGCIRNNETSKVVELLHRM 256
            G        + V L+  M
Sbjct: 232 RGLCEAGRLPEAVRLVDGM 250



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 4/155 (2%)

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           ++  A+  F+ M           YN  +D L    Y  +A +++  +        +  ++
Sbjct: 68  RLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHT 127

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
             +   C   +   A  L ++LP  G     V Y  ++ G    G    A  LF  M   
Sbjct: 128 IRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHT 183

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            V PN   FN ++    +  +  +   LL ++ +R
Sbjct: 184 HVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 218


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 140/256 (54%), Gaps = 1/256 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RLLD M +RG+ P+  VY+T+I G C  G +D A   +  M    C  +V+TY  L+
Sbjct: 51  QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILV 109

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK+  + ++  +  +M+  G  P VVTYNTL +G  ++  ++ A+ LF++M  +  +
Sbjct: 110 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 169

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  IDG CK     + A+L + +    CE     Y+ L+D L K GK   A+ L
Sbjct: 170 PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL 229

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q + R    P+  T+N+MI  FC  GQ+D A++LF  M  +G  P+  T+N ++ G  R
Sbjct: 230 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACR 289

Query: 243 NNETSKVVELLHRMDE 258
            N      +LL RM E
Sbjct: 290 ANRIDDARQLLERMTE 305



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 131/241 (54%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +QR   P+   Y+ L+D  C +  I  A  +   M   GC  NVVTYNTLING+CK  ++
Sbjct: 94  MQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 153

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E++ L+++ML     P V TYN L  G  +  + +   KL  EM          TYNT 
Sbjct: 154 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 213

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           +D L K+G  ++A  L + +    C+     ++ +ID  CK+G+L+ A+ELFQ +   G 
Sbjct: 214 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 273

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +P++ TYNIMI G C   ++D A  L   M   G  P+ VT+N+++ G  + ++  +  E
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 333

Query: 252 L 252
           +
Sbjct: 334 V 334



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 137/260 (52%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +AS +L+ MI+ G  PN   Y+TLI+GFC  G +D A  LF  M  N C  +V TYN 
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK +  ++   L  EM+  G  P  +TYNTL   L +  +   A  L   M   D
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+N  ID  CK G +  A ELF+ +    C   I  Y+ +I G C+  +++ A 
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   G  P+VVTYN ++ G C   Q+D+A++++  +   G   + VT +TL+ G 
Sbjct: 298 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 357

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++       +LL  M ERN
Sbjct: 358 CKSRRLDDAEKLLREM-ERN 376



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  L + M++    P+ F Y+ LIDG+C         +L   M   GC  N +TYNT
Sbjct: 153 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 212

Query: 61  L-----------------------------------INGYCKTKDVEESLNLYSEMLSKG 85
           L                                   I+ +CK   ++ +  L+  M  +G
Sbjct: 213 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 272

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P + TYN +  G    ++++ A +L + M  +    +  TYN+ + GLCK   + EA 
Sbjct: 273 CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 332

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           E++  LR     L +   S LIDGLCK  +L+ A +L + + R G  P+VV Y I+IHGF
Sbjct: 333 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 392

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C   Q+DK+   F +M  KG  P  +T++ ++    ++        LL  M ER
Sbjct: 393 CKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 446



 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 123/224 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L  +M++R  +P+ F ++ +ID FC  G++D A ELF  M   GC+ ++ TYN +I
Sbjct: 225 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 284

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   ++++  L   M   G  P VVTYN++  GL +  QV+ A ++++ +++    
Sbjct: 285 SGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF 344

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T +T IDGLCK+  + +A +L R +        + AY+ LI G CK  +L+ +   
Sbjct: 345 LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAF 404

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           F  +   G +P V+TY+I+I   C   ++     L   M  +GV
Sbjct: 405 FSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 1/235 (0%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           L+  F    +   A +LF +     C  + +TY+TLING+CK +D +++  L  EM  +G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I P    YNT+  GL +  +V+ AL  + +MQ    A    TY   +D LCK+  I +A+
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDAS 122

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +   +    C   +  Y+ LI+G CK+G ++ A  LF  +      P+V TYNI+I G+
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C   +      L  +M   G  PN +T+NTLM   +++ +      L   M  R+
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 1/198 (0%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L++ + + K  +E+ +L+   L     P  +TY+TL +G  +    + A +L DEM+ 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +    + YNT I GLC NG +  A   +R ++   C   +  Y+ L+D LCK  ++  
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISD 120

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  + + +   G  PNVVTYN +I+GFC  G MD+A  LF  M     +P+  T+N L+ 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 239 GCIRNNETSKVVELLHRM 256
           G  +        +LL  M
Sbjct: 181 GYCKQERPQDGAKLLQEM 198



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 97/191 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L  LM  RG  P+ + Y+ +I G C    ID AR+L   M   GC  +VVTYN+
Sbjct: 258 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 317

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK   V+E+  +Y  + + G    VVT +TL  GL +  +++ A KL  EM+ + 
Sbjct: 318 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 377

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   Y   I G CK   + ++   F  +    C   +  YS +ID LCK  ++    
Sbjct: 378 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 437

Query: 181 ELFQSLPRVGL 191
            L +++   G+
Sbjct: 438 MLLKTMLERGV 448


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 140/237 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+ +M + G++PN   ++++++G C  G+++ AR++F  M   G   + V+YNT
Sbjct: 241 VDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNT 300

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GYCK     E+L++++EM  KGI P VVT+ +L H + +   +E A+ L  +M+   
Sbjct: 301 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERG 360

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   IDG CK G++ +A    R ++  + +  +  Y+ LI+G C +G+++ A 
Sbjct: 361 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEAR 420

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           EL   +   GL P+VVTY+ +I  +C +     A +L   M  KGV P+ +T+++L+
Sbjct: 421 ELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477



 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 142/257 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  M   G  PN   Y+TL+  F   GE+D A  L   M   G   N+VT+N+++
Sbjct: 208 EALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMV 267

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   +E++  ++ EM+ +G+ P  V+YNTL  G  +      AL +F EM    + 
Sbjct: 268 NGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+ + I  +CK G +  A  L R +R    ++    ++ LIDG CK G L+ A   
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 387

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + +  + P+VV YN +I+G+C  G+MD+A +L  +MEAKG+ P+ VT++T++    +
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 447

Query: 243 NNETSKVVELLHRMDER 259
           N +T    EL  +M E+
Sbjct: 448 NCDTHSAFELNQQMLEK 464



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L+  M +RG++ N   ++ LIDGFC  G +D A      M       +VV YN 
Sbjct: 346 LERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNA 405

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYC    ++E+  L  EM +KG++P VVTY+T+     +      A +L  +M    
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY++ I  LC    + +A  LF+ +  L  +     Y+ LIDG CK G +E+A 
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESAL 525

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G++P+VVTY+++I+G     +  +A  L   +  +   P    ++ LM  C
Sbjct: 526 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM-HC 584

Query: 241 IRNNETSKVVELL 253
            R  E   V+ LL
Sbjct: 585 CRKAELKSVLALL 597



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A ++ D M++ G+ P+   Y+TL+ G+C  G    A  +F  M   G M +VVT+ +
Sbjct: 276 MEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 335

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  ++E ++ L  +M  +G++   VT+  L  G  +   ++ AL     M+   
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      YN  I+G C  G + EA EL   +     +  +  YS +I   CK     +A+
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 455

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL Q +   G++P+ +TY+ +I   C + ++  AH LF +M   G+ P+  T+ +L+ G 
Sbjct: 456 ELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 515

Query: 241 IRNNETSKVVELLHRM 256
            +       + L  +M
Sbjct: 516 CKEGNVESALSLHDKM 531



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 15/219 (6%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+++GV P+A  YS+LI   C    +  A  LF +M   G   +  TY +LI+G+CK  +
Sbjct: 461 MLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 520

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           VE +L+L+ +M+  G+ P VVTY+ L +GL +  +   A +L  ++ H D     + Y+ 
Sbjct: 521 VESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDA 580

Query: 131 F---------------IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
                           + G C  G + EA ++++++      L    YS LI G C+ G 
Sbjct: 581 LMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN 640

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           +  A    + + + G  PN  +   +I G   +G + +A
Sbjct: 641 VMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEA 679


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +   M   G+  +   YS++I   C+  ++  A E+F  M   GC+ N+VTY +
Sbjct: 304 ISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTS 363

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+ K++ +++    EM++ G+ P +VT+NTL  G  +  +   A +LF  M    
Sbjct: 364 LIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHG 423

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T    +DGL K  +  EA  LFR L  +  +L I  YS +++G+C  GKL  A 
Sbjct: 424 QLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDAL 483

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  L   G+  +VVTYNIMI+G C +G +D A DL + ME  G  P+  T+N  + G 
Sbjct: 484 ELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGL 543

Query: 241 IRNNETSKVVELLHRMDER 259
           +R  E SK  + L  M  +
Sbjct: 544 LRRYEISKSTKYLMFMKGK 562



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 141/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ LL  M+++G+ P+   ++ +   F  TG I RA+ +F  M   G  H+VVTY+++I
Sbjct: 271 EAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSII 330

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +C    +++++ ++  M+ KG  P +VTY +L HG  EI  +  A+    EM ++ + 
Sbjct: 331 GVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLD 390

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT I G CK G  V A ELF  +        ++  + ++DGL K      A  L
Sbjct: 391 PNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSL 450

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L ++    +++ Y+I+++G C+ G+++ A +LF  + +KGV  + VT+N ++ G  +
Sbjct: 451 FRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCK 510

Query: 243 NNETSKVVELLHRMDE 258
                   +LL +M+E
Sbjct: 511 EGLLDDAEDLLMKMEE 526



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 124/257 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R +D +   G   + +    +I+G C  G    A      M+   C  +V  YN ++
Sbjct: 166 QAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVV 225

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V E+ +L+S+M  KGI+P + TYN L HGL    + + A  L   M    + 
Sbjct: 226 DGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIM 285

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N       K G I  A  +F  +  +  E  +  YS +I   C + +++ A E+
Sbjct: 286 PDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEV 345

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + R G +PN+VTY  +IHG+C    M+KA     +M   G+ PN VT+NTL+ G  +
Sbjct: 346 FDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCK 405

Query: 243 NNETSKVVELLHRMDER 259
             +     EL   M + 
Sbjct: 406 AGKPVAAKELFFVMHKH 422



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  + DLMI++G  PN   Y++LI G+C    +++A      M  NG   N+VT+NT
Sbjct: 339 MKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNT 398

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK      +  L+  M   G  P + T   +  GLF+ H    A+ LF E++  +
Sbjct: 399 LIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 458

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  ++G+C +G + +A ELF  L     ++ +  Y+ +I+GLCK G L+ A 
Sbjct: 459 SDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAE 518

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G  P+  TYN+ + G     ++ K+    + M+ KG   N  T   L++  
Sbjct: 519 DLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATT-TKLLINY 577

Query: 241 IRNNETSKVVELL 253
              N+ ++  ++ 
Sbjct: 578 FSANKENRAFQVF 590



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 101/198 (51%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A  L   M   G   NV T+N +IN  C+        ++   M   G+ P++VT+ T+ +
Sbjct: 97  AISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVN 156

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           GL     V  A++  D ++     ++  T    I+GLCK G+   A    + +    C L
Sbjct: 157 GLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNL 216

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            + AY+ ++DGLCK G +  AW+LF  +   G+ P++ TYN +IHG CN  +  +A  L 
Sbjct: 217 DVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLL 276

Query: 219 LDMEAKGVAPNCVTFNTL 236
            +M  KG+ P+  TFN +
Sbjct: 277 ANMMRKGIMPDVQTFNVI 294



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 114/239 (47%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
            Y+ ++DG C  G +  A +LF  M   G   ++ TYN LI+G C     +E+  L + M
Sbjct: 220 AYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANM 279

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           + KGI P V T+N +     +   +  A  +F  M H  +  +  TY++ I   C    +
Sbjct: 280 MRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQM 339

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            +A E+F  +    C   I  Y+ LI G C+I  +  A      +   GL PN+VT+N +
Sbjct: 340 KDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTL 399

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           I GFC  G+   A +LF  M   G  P+  T   ++ G  + +  S+ + L   +++ N
Sbjct: 400 IGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 458



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 3/255 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L+  M   GV+PN   ++ +I+  C          +   M   G   ++VT+ T++N
Sbjct: 97  AISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVN 156

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C   +V +++     +   G      T   + +GL ++     AL    +M+  +   
Sbjct: 157 GLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNL 216

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           + + YN  +DGLCK+G + EA +LF  +     +  +  Y+CLI GLC   + + A  L 
Sbjct: 217 DVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLL 276

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM-LGCIR 242
            ++ R G+MP+V T+N++   F   G + +A  +F  M   G+  + VT+++++ + C+ 
Sbjct: 277 ANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCML 336

Query: 243 NN--ETSKVVELLHR 255
           N   +  +V +L+ R
Sbjct: 337 NQMKDAMEVFDLMIR 351



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 94/222 (42%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
            +D A + +  M        V  +N L     K K    +++L   M   G++P V T+N
Sbjct: 58  SVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHN 117

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + + L  ++       +   M    V     T+ T ++GLC  G + +A      L+ +
Sbjct: 118 IVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDM 177

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             E        +I+GLCK+G    A    + +       +V  YN ++ G C DG + +A
Sbjct: 178 GYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEA 237

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            DLF  M  KG+ P+  T+N L+ G    +   +   LL  M
Sbjct: 238 WDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANM 279



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/192 (18%), Positives = 78/192 (40%), Gaps = 35/192 (18%)

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V+ +L+ Y +M++    P V  +N LF  + ++     A+ L   M +  V     T+
Sbjct: 57  KSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTH 116

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N                                    +I+ LC++      + +   + +
Sbjct: 117 NI-----------------------------------VINCLCRLNHTVFGFSVLGLMFK 141

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G+ P++VT+  +++G C +G + +A      ++  G   +  T   ++ G  +   +S 
Sbjct: 142 IGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSA 201

Query: 249 VVELLHRMDERN 260
            +  L +M+E+N
Sbjct: 202 ALSYLKKMEEQN 213



 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 1/140 (0%)

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S  A+  ++   F+D L     +  A + +  +  +K    ++ ++ L   + K+    T
Sbjct: 37  STYASINTSRAQFLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTT 96

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  L + +  +G+ PNV T+NI+I+  C          +   M   GV P+ VTF T++ 
Sbjct: 97  AISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVN 156

Query: 239 G-CIRNNETSKVVELLHRMD 257
           G C+  N    +  + H  D
Sbjct: 157 GLCVEGNVAQAIRFVDHLKD 176


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 141/249 (56%), Gaps = 2/249 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  L D M +RG+ PN  +++TLI G    GEID  +E +  M   G   ++V YNT
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+CK  D+  + N+   M+ +G+RP  +TY TL  G      VE AL++  EM  + 
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   ++  + G+CK G +++A    R +     +     Y+ ++D  CK G  +T +
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD-MEAKGVAPNCVTFNTLMLG 239
           +L + +   G +P+VVTYN++++G C  GQM  A D+ LD M   GV P+ +T+NTL+ G
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA-DMLLDAMLNIGVVPDDITYNTLLEG 564

Query: 240 CIRNNETSK 248
             R+  +SK
Sbjct: 565 HHRHANSSK 573



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M +   RP+ F YS LI+  C   ++D A  LF  M   G + N V + T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ +  +++     Y +MLSKG++P +V YNTL +G  +   +  A  + D M    
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG C+ G +  A E+ + +     EL    +S L+ G+CK G++  A 
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + + R G+ P+ VTY +M+  FC  G       L  +M++ G  P+ VT+N L+ G 
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL  M
Sbjct: 531 CKLGQMKNADMLLDAM 546



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 120/229 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G   N +V++ L++ FC  G I  A+++F  +        VV++NTLINGYCK  +
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L  +M     RP V TY+ L + L + ++++ A  LFDEM    +      + T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G  +NG I    E ++ +     +  I  Y+ L++G CK G L  A  +   + R G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L P+ +TY  +I GFC  G ++ A ++  +M+  G+  + V F+ L+ G
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 132/261 (50%), Gaps = 10/261 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++ D + +R ++P    ++TLI+G+C  G +D    L   M+ +    +V TY+ 
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   ++ +  L+ EM  +G+ P  V + TL HG     +++   + + +M    
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-----RTLRVLKCELGIEAYSCLIDGLCKIGK 175
           +  +   YNT ++G CKNG +V A  +      R LR  K       Y+ LIDG C+ G 
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI-----TYTTLIDGFCRGGD 430

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +ETA E+ + + + G+  + V ++ ++ G C +G++  A     +M   G+ P+ VT+  
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           +M    +  +     +LL  M
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEM 511



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 115/209 (55%), Gaps = 8/209 (3%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           NV  +N L+N +CK  ++ ++  ++ E+  + ++PTVV++NTL +G  ++  ++   +L 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDG 169
            +M+ S    +  TY+  I+ LCK   +  A  LF  +    C+ G+      ++ LI G
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM----CKRGLIPNDVIFTTLIHG 354

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
             + G+++   E +Q +   GL P++V YN +++GFC +G +  A ++   M  +G+ P+
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +T+ TL+ G  R  +    +E+   MD+
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQ 443



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G    V  +N L +   +   +  A K+FDE+    +     ++NT I+G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   +   +    +  YS LI+ LCK  K++ A  LF  + + GL+PN V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
            +  +IHG   +G++D   + +  M +KG+ P+ V +NTL+ G  +N +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 3/133 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R L  M++ G++P+   Y+ ++D FC  G+     +L   M  +G + +VVTYN L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   ++ +  L   ML+ G+ P  +TYNTL  G    H+  ++ K + +     + 
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH---HRHANSSKRYIQKPEIGIV 584

Query: 123 AETSTYNTFIDGL 135
           A+ ++Y + ++ L
Sbjct: 585 ADLASYKSIVNEL 597



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 61/120 (50%)

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G+I +A + FR  R  + ++ I     L+D + K+    T W  +  +   G   NV  +
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           NI+++ FC +G +  A  +F ++  + + P  V+FNTL+ G  +     +   L H+M++
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 35/134 (26%)

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG-------- 209
           L +  ++ L++  CK G +  A ++F  + +  L P VV++N +I+G+C  G        
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297

Query: 210 ---------------------------QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
                                      +MD AH LF +M  +G+ PN V F TL+ G  R
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357

Query: 243 NNETSKVVELLHRM 256
           N E   + E   +M
Sbjct: 358 NGEIDLMKESYQKM 371


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA RLL  M++RG   +   Y+TLI G C  G+++   +L   M   G   +  TYN 
Sbjct: 507 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 566

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+   ++E++NL++E  S+ + P V TY  +  G  +  ++E   KLF E+   +
Sbjct: 567 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 626

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   +  YNT I   C+NG  VEA +L   +R          YS LI G+C IG++E A 
Sbjct: 627 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 686

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + GL+PNVV Y  +I G+C  GQMDK  ++  +M +  + PN +T+  ++ G 
Sbjct: 687 CLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 746

Query: 241 IRNNETSKVVELLHRM 256
            ++ +     +LLH M
Sbjct: 747 SKSGDMKTAAKLLHEM 762



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 130/257 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A  L   ++++G   N    + LI G C TG +  A  L   M   G + + +TYNTL
Sbjct: 473 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 532

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK   VEE   L  EM+ +GI P   TYN L HG+  I +++ A+ L++E +  D+
Sbjct: 533 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 592

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY   IDG CK   I E  +LF  L     EL    Y+ LI   C+ G    A++
Sbjct: 593 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 652

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G+ P   TY+ +IHG CN G+M+ A  L  +M  +G+ PN V +  L+ G  
Sbjct: 653 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 712

Query: 242 RNNETSKVVELLHRMDE 258
           +  +  KVV +L  M  
Sbjct: 713 KLGQMDKVVNVLQEMSS 729



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L   M+++G+ P+ F Y+ LI G C  G++D A  L+        + NV TY  
Sbjct: 542 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK   +EE   L++E+L++ +    V YNTL            A KL D+M+   
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T+TY++ I G+C  G + +A  L   +R       +  Y+ LI G CK+G+++   
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 721

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + Q +    + PN +TY +MI G+   G M  A  L  +M  KG+ P+ VT+N L  G
Sbjct: 722 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 780



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 127/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L +    R + PN + Y  +IDG+C   +I+   +LF  +       N V YNT
Sbjct: 577 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 636

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YC+  +  E+  L+ +M SKGI PT  TY++L HG+  I ++E A  L DEM+   
Sbjct: 637 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 696

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y   I G CK G + +   + + +           Y+ +IDG  K G ++TA 
Sbjct: 697 LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAA 756

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +   G++P+ VTYN++ +GFC +G++++   +   M  +G+  + +T+ TL+ G
Sbjct: 757 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 126/238 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A R L  M+ R +RPN  + +TL+ G C  G+   A EL+  +   G   N+VT N L
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 497

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CKT +++E++ L  +ML +G     +TYNTL  G  +  +VE   KL  EM    +
Sbjct: 498 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 557

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +T TYN  I G+C+ G + EA  L+   +       +  Y  +IDG CK  K+E   +
Sbjct: 558 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 617

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           LF  L    L  N V YN +I  +C +G   +A  L  DM +KG+ P   T+++L+ G
Sbjct: 618 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 675



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R  + M++ GV      YS LI+G     + + A  +       G   N V YNT
Sbjct: 297 LDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT 356

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++ ++L +  +M+SKGI P  VT N++  G  +I Q+E A  + +EM    
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +     + T I  LC N     A    R + +          + L+ GLCK GK   A 
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  L   G   N+VT N +IHG C  G M +A  L   M  +G   + +T+NTL+ GC
Sbjct: 477 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 536

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  +L   M
Sbjct: 537 CKEGKVEEGFKLRGEM 552



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 35/273 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA+ +L   +++G  PN  VY+TLIDG+C  G +  A  +   M   G   N VT N++
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 392

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM----- 116
           I G+CK   +E++  +  EMLS+G       + T+ H L    + E AL+   EM     
Sbjct: 393 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452

Query: 117 ------------------QHSDV------------AAETSTYNTFIDGLCKNGYIVEAAE 146
                             +HSD              A   T N  I GLCK G + EA  
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L + +      L    Y+ LI G CK GK+E  ++L   + + G+ P+  TYN++IHG C
Sbjct: 513 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMC 572

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             G++D+A +L+ + +++ + PN  T+  ++ G
Sbjct: 573 RIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 605



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 125/248 (50%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +++GV P+ +++ST I+ FC  G+++ A +LF  M+  G   NVVTYN LI+G CK  ++
Sbjct: 238 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 297

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E+     +M+  G+  T++TY+ L +GL ++ +   A  +  E            YNT 
Sbjct: 298 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 357

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDG CK G + +A  +   +            + +I G CKIG++E A  + + +   G 
Sbjct: 358 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 417

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             N   +  +IH  C + + + A     +M  + + PN     TL+ G  +  + S  VE
Sbjct: 418 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 477

Query: 252 LLHRMDER 259
           L  R+ E+
Sbjct: 478 LWFRLLEK 485



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 4/188 (2%)

Query: 55  VVTYNTLINGYC---KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           V   + LI+ YC   +      ++ ++  + +KG+ PTV T   L   L + +++E +  
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           +F+ M+   V+ +   ++T I+  CK G + +A +LF  +  L     +  Y+ LI GLC
Sbjct: 234 VFETMRQG-VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 292

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G L+ A+   + + + G+   ++TY+++I+G     + ++A+ +  +   KG  PN V
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 352

Query: 232 TFNTLMLG 239
            +NTL+ G
Sbjct: 353 VYNTLIDG 360



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A++LL  M+ +G+ P+   Y+ L +GFC  G+I+   ++   M   G   + +TY T
Sbjct: 752 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTT 811

Query: 61  LINGY 65
           L++G+
Sbjct: 812 LVHGW 816


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 145/256 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  ++D MI++G  P+ + Y++LI G C  GE ++A E+   M +  C  N VTYNT
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  ++E + +L   ++SKG+ P V T+NTL  GL      + A+++F+EM++  
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY+  ID LC    + EA  L + +    C      Y+ LIDGLCK  ++E A 
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +  +G+  + VTYN +I G C + ++++A  L   M  +G+ P+  T+N+L+   
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYF 518

Query: 241 IRNNETSKVVELLHRM 256
            R  +  K  +++  M
Sbjct: 519 CRVGDIEKAGDIVQTM 534



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 140/260 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+ L  +++ +G+ P+   ++TLI G CL+   D A E+F  M   GC  +  TY+ 
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C  + ++E+L L  EM S G     V YNTL  GL +  ++E A ++FD+M+   
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+  + TYNT IDGLCKN  + EA++L   + +   +     Y+ L+   C++G +E A 
Sbjct: 469 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAG 528

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ Q++   G  P++ TY  +I G C  G++D A  L   ++ KG+      +N ++   
Sbjct: 529 DIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQAL 588

Query: 241 IRNNETSKVVELLHRMDERN 260
                T + + L   M E++
Sbjct: 589 FMRKRTKEGMRLFREMMEKS 608



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 132/251 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+ M   G++P+   ++TL+ GF   G+++ A ++   M   GC+   V+   L+NG+C
Sbjct: 180 MLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFC 239

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   VEE+L    E+  +G  P  VT+N+L +G   I  V  AL + D M       +  
Sbjct: 240 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 299

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN+ I G+CK G   +A E+ + + + +C      Y+ LI  LCK  ++E A +L + L
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              GL+P+V T+N +I G C     D A ++F +M+ KG  P+  T++ L+         
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 419

Query: 247 SKVVELLHRMD 257
            + + LL  M+
Sbjct: 420 KEALMLLKEME 430



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 144/294 (48%), Gaps = 36/294 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  + + M  +G +P+ F YS LID  C    +  A  L   M+ +GC  N V YNTL
Sbjct: 385 DIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL 444

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK++ +E++  ++ +M   G+  + VTYNTL  GL +  +VE A +L D+M    +
Sbjct: 445 IDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ +   C+ G I +A ++ +T+    CE  I  Y  LI GLC+ G+++ A +
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564

Query: 182 LFQSLPRVGLM-----------------------------------PNVVTYNIMIHGFC 206
           L +S+   G++                                   P+ +T+ I+  G C
Sbjct: 565 LLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLC 624

Query: 207 N-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           N  G + +A D  ++M  KG+ P   +F  L  G    +    ++EL++ + E+
Sbjct: 625 NGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEK 678



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R +  + + G  P+   +++L++GFC  G ++ A ++   M   G   +V TYN+
Sbjct: 244 VEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNS 303

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  + E+++ +  +M+ +   P  VTYNTL   L + +++E A  L   +    
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+NT I GLC +     A E+F  ++   C+     YS LID LC   +L+ A 
Sbjct: 364 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEAL 423

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G   N V YN +I G C   +++ A ++F  ME  GV+ + VT+NTL+ G 
Sbjct: 424 MLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGL 483

Query: 241 IRNNETSKVVELLHRM 256
            +N    +  +L+ +M
Sbjct: 484 CKNKRVEEASQLMDQM 499



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 125/232 (53%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           L++GFC  G ++ A    + +   G   + VT+N+L+NG+C+  +V ++L++   M+ KG
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P V TYN+L  G+ ++ + E A+++  +M   + +  T TYNT I  LCK   I  A 
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L R L        +  ++ LI GLC     + A E+F+ +   G  P+  TY+I+I   
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           C + ++ +A  L  +ME+ G A N V +NTL+ G  ++       E+  +M+
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME 465



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 1/236 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+  +   ++ LI   C   ++  A  +   M  +G   + +T+ TL+ G+ +  D
Sbjct: 149 MVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGD 208

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +L +  +ML  G   T V+   L +G  +  +VE AL+   E+     + +  T+N+
Sbjct: 209 LNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNS 268

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++G C+ G + +A ++   +     +  +  Y+ LI G+CK+G+ E A E+ Q +    
Sbjct: 269 LVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 328

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNNE 245
             PN VTYN +I   C + +++ A DL   + +KG+ P+  TFNTL+ G C+  N+
Sbjct: 329 CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQ 384



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 12/260 (4%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR-----ARELFVSMDINGCMHNVV 56
           D  + LL  +   G  PNA  ++TLI  F    EI+        EL    D N       
Sbjct: 72  DSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFKPDTN------- 124

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            YN  +N   +   ++    L+S+M+++GI   V T+N L   L + HQ+  A+ + +EM
Sbjct: 125 FYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEM 184

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
            +  +  +  T+ T + G  + G +  A ++ + +    C L   +   L++G CK G++
Sbjct: 185 ANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRV 244

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A      +   G  P+ VT+N +++GFC  G ++ A D+   M  KG  P+  T+N+L
Sbjct: 245 EEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSL 304

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G  +  E  K +E+L +M
Sbjct: 305 ISGMCKLGEFEKAIEILQQM 324



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 38/173 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  ++  M   G  P+ F Y TLI G C  G +D A +L  S+ + G +     YN 
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNP 583

Query: 61  LINGYCKTKDVEESLNLYSEM------------------------------------LSK 84
           +I      K  +E + L+ EM                                    L K
Sbjct: 584 VIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEK 643

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           GI P   ++  L  GL  +   +  ++L + +      +E  T  + I G  K
Sbjct: 644 GILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERET--SMIRGFLK 694


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 147/260 (56%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE+ R+L+ M+++G+ P+   Y+ LI G+C  G I+ A E+   M+ N C  N  TYN 
Sbjct: 370 LDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNE 429

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+ K K V +++ L S+ML   + P++VTYN+L H   +    + A KL D ++ + 
Sbjct: 430 LICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG 489

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           +  +  TY+ FID LCK+  + EA +LF +L+    E GI+A    Y+ LIDG CK GK+
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLK----EKGIKANEVMYTALIDGHCKAGKI 545

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A  L + +     +PN  TYN +I+G C +G++ +   +  +M   GV P   T+  L
Sbjct: 546 DEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTIL 605

Query: 237 MLGCIRNNETSKVVELLHRM 256
           +   +R  +      + ++M
Sbjct: 606 IEEMLREGDFDHANRVFNQM 625



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 2/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYN 59
           +DE  R+   M+   + PN +  +T+++ +   G I  A  L+VS     G   +  TY 
Sbjct: 195 IDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA-NLYVSKIFQAGLSPDSFTYT 253

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI GYC+  DV  +  +++ M +KG R   V+Y T+ HGL E  +++  + LF +M+  
Sbjct: 254 SLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMRED 313

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           D      TY   I  L  N   +E  +LF  +R   CE  +  Y+ ++D +CK  KL+ +
Sbjct: 314 DCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDES 373

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   +   GL+P+VVTYN +I G+C +G+++ A ++   ME+    PN  T+N L+ G
Sbjct: 374 RRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICG 433

Query: 240 CIRNNETSKVVELLHRMDE 258
             +     K + LL +M E
Sbjct: 434 FSKRKHVHKAMTLLSKMLE 452



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 138/291 (47%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID-------RARE------------ 41
           ++ A ++ ++M  +G R N   Y+T+I G C  G ID       + RE            
Sbjct: 265 VNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTV 324

Query: 42  ----------------LFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                           LF  M    C  NV TY  +++  CK + ++ES  + +EM+ KG
Sbjct: 325 IIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKG 384

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + P+VVTYN L  G  E  ++E AL++   M+ ++      TYN  I G  K  ++ +A 
Sbjct: 385 LVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAM 444

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L   +   K    +  Y+ LI   CK G  ++A++L   L   GL+P+  TY++ I   
Sbjct: 445 TLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTL 504

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C   +M++A DLF  ++ KG+  N V +  L+ G  +  +  + + LL RM
Sbjct: 505 CKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERM 555



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 119/235 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+  +  + Q G+ P++F Y++LI G+C   +++ A ++F  M   GC  N V+Y T+I
Sbjct: 232 EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII 291

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   ++E ++L+ +M      PTV TY  + H LF   +    + LF+EM+     
Sbjct: 292 HGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCE 351

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   +D +CK   + E+  +   +        +  Y+ LI G C+ G++E A E+
Sbjct: 352 PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              +      PN  TYN +I GF     + KA  L   M    + P+ VT+N+L+
Sbjct: 412 LGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLI 466



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 124/254 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  M++  + P+   Y++LI   C  G  D A +L   +  NG + +  TY+  I
Sbjct: 442 KAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFI 501

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK+K +EE+ +L++ +  KGI+   V Y  L  G  +  +++ A+ L + M   D  
Sbjct: 502 DTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCL 561

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             +STYN+ I G+CK G + E   +   +  +  +  +  Y+ LI+ + + G  + A  +
Sbjct: 562 PNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRV 621

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G  P+V TY   IH +C  G + +A  +   M   GV P+ +T+  L+    R
Sbjct: 622 FNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYER 681

Query: 243 NNETSKVVELLHRM 256
                    +L RM
Sbjct: 682 LGLAYDAFNVLKRM 695



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 115/236 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A +LLDL+ + G+ P+ + YS  ID  C +  ++ A +LF S+   G   N V Y  L
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTAL 535

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   ++E+++L   M S+   P   TYN+L +G+ +  +V+  L + + M    V
Sbjct: 536 IDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGV 595

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY   I+ + + G    A  +F  +     +  +  Y+  I   C  G ++ A  
Sbjct: 596 KPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEG 655

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +   +   G+MP+ +TY ++I  +   G    A ++   M   G  P+   +N L+
Sbjct: 656 MMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 103/207 (49%), Gaps = 2/207 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V +YN L+    +   ++E   +Y+EML+  I P + T NT+ +   ++  +  A    
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            ++  + ++ ++ TY + I G C+N  +  A ++F  +    C     +Y+ +I GLC+ 
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHG-FCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           G+++    LF+ +      P V TY ++IH  F ND  ++   DLF +M  +   PN  T
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLE-GMDLFNEMRERSCEPNVHT 356

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           +  ++    +  +  +   +L+ M E+
Sbjct: 357 YTVMVDAMCKERKLDESRRILNEMMEK 383



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 35/202 (17%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  L + + ++G++ N  +Y+ LIDG C  G+ID A  L   M    C+ N  TYN+
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569

Query: 61  LINGYCKTKDVEESLNL-----------------------------------YSEMLSKG 85
           LI G CK   V+E L++                                   +++M+S G
Sbjct: 570 LIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFG 629

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +P V TY    H       V+ A  +   M  + V  ++ TY   I    + G   +A 
Sbjct: 630 HKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAF 689

Query: 146 ELFRTLRVLKCELGIEAYSCLI 167
            + + +    C+     ++ LI
Sbjct: 690 NVLKRMLDAGCDPSHPIWNNLI 711



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 22/106 (20%), Positives = 56/106 (52%)

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           +K +L + +Y+ L+  L +   ++    ++  +    ++PN+ T N M++ +   G + +
Sbjct: 173 IKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVE 232

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A+     +   G++P+  T+ +L+LG  RNN+ +   ++ + M  +
Sbjct: 233 ANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK 278


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 133/226 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  LL +M++  ++P+ F Y++LIDG+ L  E+  A+ +F SM   G   +V  Y  
Sbjct: 283 MKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTN 342

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CKTK V+E+++L+ EM  K + P +VTYN+L  GL + H +E A+ L   M+   
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG 402

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y   +DGLCK+G + +A E+F+ L      L + AY+ LI+ LCK G  + A 
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEAL 462

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +L   +   G MP+ VT++I+I       + DKA  +  +M A+G+
Sbjct: 463 DLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           + EA  LL+ M  + + PN   ++ LID     G++  A+ L   M +  C+  +V TYN
Sbjct: 248 LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM-MKACIKPDVFTYN 306

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI+GY    +V+ +  ++  M  +G+ P V  Y  + +GL +   V+ A+ LF+EM+H 
Sbjct: 307 SLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHK 366

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++  +  TYN+ IDGLCKN ++  A  L + ++    +  + +Y+ L+DGLCK G+LE A
Sbjct: 367 NMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDA 426

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+FQ L   G   NV  Y ++I+  C  G  D+A DL   ME KG  P+ VTF+ ++  
Sbjct: 427 KEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRA 486

Query: 240 CIRNNETSKVVELLHRMDER 259
               +E  K  ++L  M  R
Sbjct: 487 LFEKDENDKAEKILREMIAR 506



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 139/251 (55%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + +   Y TLI+G C TGE      L   ++ +    +VV YNT+IN  CK 
Sbjct: 151 DQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKN 210

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K + ++ ++YSEM+ KGI P VVTY TL HG   +  ++ A  L +EM+  ++     T+
Sbjct: 211 KLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTF 270

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  ID L K G + EA  L   +     +  +  Y+ LIDG   + +++ A  +F S+ +
Sbjct: 271 NILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQ 330

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P+V  Y  MI+G C    +D+A  LF +M+ K + P+ VT+N+L+ G  +N+   +
Sbjct: 331 RGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLER 390

Query: 249 VVELLHRMDER 259
            + L  RM E+
Sbjct: 391 AIALCKRMKEQ 401



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 129/249 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI +G+ P+   Y+TLI GFC+ G +  A  L   M +     NV T+N LI+   K   
Sbjct: 223 MIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGK 282

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E+  L + M+   I+P V TYN+L  G F + +V+HA  +F  M    V  +   Y  
Sbjct: 283 MKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTN 342

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+GLCK   + EA  LF  ++       I  Y+ LIDGLCK   LE A  L + +   G
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG 402

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+V +Y I++ G C  G+++ A ++F  + AKG   N   +  L+    +     + +
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEAL 462

Query: 251 ELLHRMDER 259
           +L  +M+++
Sbjct: 463 DLKSKMEDK 471



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 125/245 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P+    S LI+ FC    I  A  +F ++   G   N +T NTLI G C   +++++
Sbjct: 87  GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKA 146

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L  + +++++G +   V+Y TL +GL +  + +   +L  +++   V  +   YNT I+ 
Sbjct: 147 LYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINS 206

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCKN  + +A +++  + V      +  Y+ LI G C +G L+ A+ L   +    + PN
Sbjct: 207 LCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPN 266

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T+NI+I     +G+M +A  L   M    + P+  T+N+L+ G    +E      + +
Sbjct: 267 VCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFY 326

Query: 255 RMDER 259
            M +R
Sbjct: 327 SMAQR 331



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 112/230 (48%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
            +LM+     P  F ++ ++              LF   + NG   ++ T + LIN +C 
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              +  + ++++ +L +G  P  +T NTL  GL    +++ AL   D++       +  +
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y T I+GLCK G     A L R L     +  +  Y+ +I+ LCK   L  A +++  + 
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             G+ P+VVTY  +IHGFC  G + +A  L  +M+ K + PN  TFN L+
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILI 274


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA RLL  M++RG   +   Y+TLI G C  G+++   +L   M   G   +  TYN 
Sbjct: 574 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 633

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+   ++E++NL++E  S+ + P V TY  +  G  +  ++E   KLF E+   +
Sbjct: 634 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 693

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   +  YNT I   C+NG  VEA +L   +R          YS LI G+C IG++E A 
Sbjct: 694 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 753

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + GL+PNVV Y  +I G+C  GQMDK  ++  +M +  + PN +T+  ++ G 
Sbjct: 754 CLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 813

Query: 241 IRNNETSKVVELLHRM 256
            ++ +     +LLH M
Sbjct: 814 SKSGDMKTAAKLLHEM 829



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 130/257 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A  L   ++++G   N    + LI G C TG +  A  L   M   G + + +TYNTL
Sbjct: 540 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 599

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK   VEE   L  EM+ +GI P   TYN L HG+  I +++ A+ L++E +  D+
Sbjct: 600 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 659

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY   IDG CK   I E  +LF  L     EL    Y+ LI   C+ G    A++
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 719

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G+ P   TY+ +IHG CN G+M+ A  L  +M  +G+ PN V +  L+ G  
Sbjct: 720 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 779

Query: 242 RNNETSKVVELLHRMDE 258
           +  +  KVV +L  M  
Sbjct: 780 KLGQMDKVVNVLQEMSS 796



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L   M+++G+ P+ F Y+ LI G C  G++D A  L+        + NV TY  
Sbjct: 609 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK   +EE   L++E+L++ +    V YNTL            A KL D+M+   
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T+TY++ I G+C  G + +A  L   +R       +  Y+ LI G CK+G+++   
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 788

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + Q +    + PN +TY +MI G+   G M  A  L  +M  KG+ P+ VT+N L  G
Sbjct: 789 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 847



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 126/238 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A R L  M+ R +RPN  + +TL+ G C  G+   A EL+  +   G   N+VT N L
Sbjct: 505 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 564

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CKT +++E++ L  +ML +G     +TYNTL  G  +  +VE   KL  EM    +
Sbjct: 565 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 624

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +T TYN  I G+C+ G + EA  L+   +       +  Y  +IDG CK  K+E   +
Sbjct: 625 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 684

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           LF  L    L  N V YN +I  +C +G   +A  L  DM +KG+ P   T+++L+ G
Sbjct: 685 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 742



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 123/238 (51%), Gaps = 9/238 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L +    R + PN + Y  +IDG+C   +I+   +LF  +       N V YNT
Sbjct: 644 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 703

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YC+  +  E+  L+ +M SKGI PT  TY++L HG+  I ++E A  L DEM+   
Sbjct: 704 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 763

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y   I G CK G + +   + + +           Y+ +IDG  K G ++TA 
Sbjct: 764 LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAA 823

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           +L   +   G++P+ VTYN++ +GFC +G+++         E K +A + V FN+ + 
Sbjct: 824 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE---------EGKLLAEDGVGFNSPLF 872



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R  + M++ GV      YS LI+G     + + A  +       G   N V YNT
Sbjct: 364 LDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT 423

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++ ++L +  +M+SKGI P  VT N++  G  +I Q+E A  + +EM    
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +     + T I  LC N     A    R + +          + L+ GLCK GK   A 
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  L   G   N+VT N +IHG C  G M +A  L   M  +G   + +T+NTL+ GC
Sbjct: 544 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 603

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  +L   M
Sbjct: 604 CKEGKVEEGFKLRGEM 619



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 35/273 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA+ +L   +++G  PN  VY+TLIDG+C  G +  A  +   M   G   N VT N++
Sbjct: 400 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 459

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM----- 116
           I G+CK   +E++  +  EMLS+G       + T+ H L    + E AL+   EM     
Sbjct: 460 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519

Query: 117 ------------------QHSDV------------AAETSTYNTFIDGLCKNGYIVEAAE 146
                             +HSD              A   T N  I GLCK G + EA  
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L + +      L    Y+ LI G CK GK+E  ++L   + + G+ P+  TYN++IHG C
Sbjct: 580 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMC 639

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             G++D+A +L+ + +++ + PN  T+  ++ G
Sbjct: 640 RIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 672



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 125/248 (50%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +++GV P+ +++ST I+ FC  G+++ A +LF  M+  G   NVVTYN LI+G CK  ++
Sbjct: 305 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 364

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E+     +M+  G+  T++TY+ L +GL ++ +   A  +  E            YNT 
Sbjct: 365 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 424

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDG CK G + +A  +   +            + +I G CKIG++E A  + + +   G 
Sbjct: 425 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 484

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             N   +  +IH  C + + + A     +M  + + PN     TL+ G  +  + S  VE
Sbjct: 485 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 544

Query: 252 LLHRMDER 259
           L  R+ E+
Sbjct: 545 LWFRLLEK 552



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 4/188 (2%)

Query: 55  VVTYNTLINGYC---KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           V   + LI+ YC   +      ++ ++  + +KG+ PTV T   L   L + +++E +  
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           +F+ M+   V+ +   ++T I+  CK G + +A +LF  +  L     +  Y+ LI GLC
Sbjct: 301 VFETMRQG-VSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 359

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G L+ A+   + + + G+   ++TY+++I+G     + ++A+ +  +   KG  PN V
Sbjct: 360 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 419

Query: 232 TFNTLMLG 239
            +NTL+ G
Sbjct: 420 VYNTLIDG 427


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 130/231 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +L +MI++ V PN   Y++L+DG+ L  E+++A++LF ++ + G   NV +Y  +I
Sbjct: 141 KARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMI 200

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK K V+E+ NL+ EM SK + P  V YN+L  GL +  ++        EM      
Sbjct: 201 NGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQP 260

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN+ +DGLCKN  + +A  L   ++       I  Y+ L+DGLCK G+L  A E+
Sbjct: 261 ANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEV 320

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           +Q L   G   +   Y +MI+G C +G +D+A  L   ME     P+ VT+
Sbjct: 321 YQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTY 371



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 139/258 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  LL+ M  + V PN   ++TL+DG C  GE+ +AR +   M       N+VTYN+
Sbjct: 104 MKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNS 163

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY   K+V ++  L++ +  +G+ P V +Y  + +GL +   V+ A  LF EM   +
Sbjct: 164 LMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKN 223

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T  YN+ IDGLCK+  I +  +    +        I  Y+ L+DGLCK  +++ A 
Sbjct: 224 MVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAI 283

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+ PN+ TY I++ G C +G++  A +++ D+  KG   +   +  ++ G 
Sbjct: 284 TLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGL 343

Query: 241 IRNNETSKVVELLHRMDE 258
            +     + + LL +M++
Sbjct: 344 CKEGFLDEALSLLSKMED 361



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 14/256 (5%)

Query: 11  MIQRGVRPNAFVYSTLID--------------GFCLTGEIDRARELFVSMDINGCMHNVV 56
           MI + + P+   Y+TLI               GF + G++  A  L   M       N+ 
Sbjct: 65  MIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIR 124

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           T+ TL++G CK  +V+++ N+ + M+ + + P +VTYN+L  G F + +V  A +LF+ +
Sbjct: 125 TFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTI 184

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               +     +Y   I+GLCKN  + EAA LF+ +          AY+ LIDGLCK  ++
Sbjct: 185 SLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRI 244

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
              W+    +   G   N++TYN ++ G C + Q+DKA  L   ++ +G+ PN  T+  L
Sbjct: 245 YDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTIL 304

Query: 237 MLGCIRNNETSKVVEL 252
           + G  +N       E+
Sbjct: 305 VDGLCKNGRLRDAQEV 320



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 131/255 (51%), Gaps = 24/255 (9%)

Query: 29  GFCLTGEIDRARELFVSMDINGCMHN----------VVTYNTLINGYCKTKDVEESLNLY 78
           G CL GE+ +A      +   G   N          VV YNT+I+  CK K V +  +LY
Sbjct: 3   GLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLY 62

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFE--------------IHQVEHALKLFDEMQHSDVAAE 124
           SEM+ K I P VVTYNTL + L                + Q++ A+ L ++M    V   
Sbjct: 63  SEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPN 122

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             T+ T +DGLCK+G + +A  +   +   + E  I  Y+ L+DG   + ++  A +LF 
Sbjct: 123 IRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFN 182

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           ++   G+ PNV +Y +MI+G C +  +D+A +LF +M +K + P+ V +N+L+ G  ++ 
Sbjct: 183 TISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSR 242

Query: 245 ETSKVVELLHRMDER 259
               V + +  M +R
Sbjct: 243 RIYDVWDFIGEMHDR 257



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 55/102 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LL  +  +G+RPN + Y+ L+DG C  G +  A+E++  +   G   +   Y  
Sbjct: 279 VDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTV 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           +ING CK   ++E+L+L S+M      P  VTY      LFE
Sbjct: 339 MINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFE 380



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 62/125 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RG   N   Y++L+DG C   ++D+A  L   +   G   N+ TY  L++G CK   
Sbjct: 254 MHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGR 313

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + ++  +Y ++L+KG +     Y  + +GL +   ++ AL L  +M+ +    +  TY  
Sbjct: 314 LRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEI 373

Query: 131 FIDGL 135
            I  L
Sbjct: 374 TIRAL 378


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 140/249 (56%), Gaps = 2/249 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A RL   M +RG+ PN  +++TLI G    G+ID  +E +  M   G   ++V YNT
Sbjct: 326 MDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNT 385

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+CK  D+  + N+   M+ +G+RP  VTY TL  G      V+ AL++  EM  + 
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNG 445

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   ++  I G+CK G +++A    R +     +     Y+ ++D  CK G  +T +
Sbjct: 446 IELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGF 505

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD-MEAKGVAPNCVTFNTLMLG 239
           +L + +   G +PNVVTYN++++G C  GQM  A D+ LD M   GV P+ +T+NTL+ G
Sbjct: 506 KLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNA-DMLLDAMLNVGVVPDDITYNTLLEG 564

Query: 240 CIRNNETSK 248
             R+   SK
Sbjct: 565 HHRHANASK 573



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 123/239 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   RL   M +   RP+ F YS LI+  C   ++D A  LF  M   G + N V + T
Sbjct: 291 LDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTT 350

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ +   ++     Y +MLSKG++P +V YNTL +G  +   +  A  + D M    
Sbjct: 351 LIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG C+ G +  A E+ + +     EL    +S LI G+CK G++  A 
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAE 470

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              + + R G+ P+ VTY +M+  FC  G       L  +M++ G  PN VT+N L+ G
Sbjct: 471 RALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNG 529



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 118/229 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G   N +V++ L++ FC  G I  A+++F  +        VV++NTLINGYCK  +
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGN 290

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++    L   M     RP V TY+ L + L + ++++ A +LF EM    +      + T
Sbjct: 291 LDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTT 350

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G  +NG I    E ++ +     +  I  Y+ L++G CK G L  A  +   + R G
Sbjct: 351 LIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L P+ VTY  +I GFC  G +D A ++  +M+  G+  + V F+ L+ G
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICG 459



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 114/209 (54%), Gaps = 8/209 (3%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           NV  +N L+N +CK  ++ ++  ++ E+  + +RPTVV++NTL +G  ++  ++   +L 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDG 169
             M+ S    +  TY+  I+ LCK   +  A  LF  +    CE G+      ++ LI G
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEM----CERGLIPNDVIFTTLIHG 354

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
             + G+++   E +Q +   GL P++V YN +++GFC +G +  A ++   M  +G+ P+
Sbjct: 355 HSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            VT+ TL+ G  R  +    +E+   MD+
Sbjct: 415 KVTYTTLIDGFCRGGDVDTALEIRKEMDQ 443



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 46/211 (21%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC------------ 51
           A  ++D MI+RG+RP+   Y+TLIDGFC  G++D A E+   MD NG             
Sbjct: 399 ARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALIC 458

Query: 52  -----------------------MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
                                    + VTY  +++ +CK  D +    L  EM S G  P
Sbjct: 459 GMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIP 518

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            VVTYN L +GL ++ Q+++A  L D M +  V  +  TYNT ++G  ++     A++ +
Sbjct: 519 NVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHA---NASKHY 575

Query: 149 RTLRVLKCELGIEA----YSCLIDGLCKIGK 175
           +     K E+GI A    Y  L++ L +  K
Sbjct: 576 KQ----KPEIGIVADLASYKSLVNELYRASK 602



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 85/169 (50%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G    V  +N L +   +   +  A K+FDE+    +     ++NT I+G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYC 286

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G +     L   +   +    +  YS LI+ LCK  K++ A  LF  +   GL+PN V
Sbjct: 287 KVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDV 346

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
            +  +IHG   +GQ+D   + +  M +KG+ P+ V +NTL+ G  +N +
Sbjct: 347 IFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%)

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G+I +  + FR  R     + I     L+D + K+    T W  +  +   G   NV  +
Sbjct: 184 GFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVF 243

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           NI+++ FC +G +  A  +F ++  + + P  V+FNTL+ G  +         L H M++
Sbjct: 244 NILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEK 303



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%)

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           L +  ++ L++  CK G +  A ++F  + +  L P VV++N +I+G+C  G +D    L
Sbjct: 238 LNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRL 297

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              ME     P+  T++ L+    + N+      L + M ER
Sbjct: 298 KHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCER 339


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 141/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   ++DL+I  G RPN   +++L+DG+CL G +  A  L  SM+  G   ++ TYNTL+
Sbjct: 452 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 511

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L L+ +ML K +  T V+YN + HGLF+  +   A ++F EM  S +A
Sbjct: 512 DGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA 571

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY T + GLC+N    EA  L   L  +  +  I  ++ +I  + K+G+ + A EL
Sbjct: 572 VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKEL 631

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P ++TY +MI     +   + A +LF  ME     P+    N ++   + 
Sbjct: 632 FAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLN 691

Query: 243 NNETSKVVELLHRMDER 259
             E +K    L ++D++
Sbjct: 692 KGEVAKAGNYLSKIDKK 708



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 141/246 (57%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+ P+ F Y+ LIDGF   GE+D+A +LF  M+  G M NVVTY++LING CKTK+
Sbjct: 144 LLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKE 203

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++  +  +M+  G+RP  +TYN L HG       + ++++F EM  S +  +    N+
Sbjct: 204 MDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNS 263

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F+  LCK+G I EA ++F ++ +   +  + +Y  L+ G    G +     LF  +   G
Sbjct: 264 FMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG 323

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++P+   +N +I+ +   G MDK+  +F DM  +GV P+ +TF+T++    R       +
Sbjct: 324 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAM 383

Query: 251 ELLHRM 256
           E  + M
Sbjct: 384 EKFNHM 389



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 135/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD++  + + M ++GV P+   +ST+I  FC  G +D A E F  M   G   +   Y+ 
Sbjct: 344 MDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSC 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY-NTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G C  +D+ ++  L S+MLSKGI P  + +  ++ + L +  +V     + D + H+
Sbjct: 404 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHT 463

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  T+N+ +DG C  G + EA  L  ++  +  E  I  Y+ L+DG CK G+++ A
Sbjct: 464 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 523

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+ +    +    V+YNI++HG     +   A ++F +M   G+A +  T+ T++ G
Sbjct: 524 LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGG 583

Query: 240 CIRNNETSKVVELLHRM 256
             RNN T +   LL ++
Sbjct: 584 LCRNNCTDEANMLLEKL 600



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M+ +G +P+   Y  L+ G+   G I     LF  M   G + +   +NT
Sbjct: 274 IKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNT 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN Y +   +++SL ++ +M  +G+ P ++T++T+      + +++ A++ F+ M  + 
Sbjct: 334 LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL----------------FRTLRVLKCELGIEA-- 162
           V  +T+ Y+  I G C    +V+A EL                F ++    C+ G  A  
Sbjct: 394 VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 453

Query: 163 ------------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                             ++ L+DG C +G ++ A  L  S+  VG+ P++ TYN ++ G
Sbjct: 454 KDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDG 513

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +C  G++D A  LF DM  K V    V++N ++ G  +   T    E+ H M E
Sbjct: 514 YCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 567



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 136/298 (45%), Gaps = 39/298 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M ++G+ PN   YS+LI+G C T E+D+A  +   M   G   N +TYN 
Sbjct: 169 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 228

Query: 61  LINGY-----------------------------------CKTKDVEESLNLYSEMLSKG 85
           LI+GY                                   CK   ++E+ +++  M+ KG
Sbjct: 229 LIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKG 288

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +P V++Y  L HG      +     LF+ M    V  +   +NT I+   + G + ++ 
Sbjct: 289 PKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSL 348

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +F  +        I  +S +I   C++G+L+ A E F  +   G+ P+   Y+ +I G 
Sbjct: 349 LMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ 408

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI----RNNETSKVVELLHRMDER 259
           CN   + KA +L  DM +KG+ P C+ F T ++  +    R  E   VV+L+    +R
Sbjct: 409 CNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQR 466



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 116/220 (52%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P  + Y+ LI+ +      D    +F  +   G   +V +YN LI+G+ K  +V+++ +L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M  +GI P VVTY++L +GL +  +++ A ++  +M  + V     TYN  I G   
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           +G   E+  +F+ +        +   +  +  LCK G+++ A ++F S+   G  P+V++
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           Y  ++HG+   G +    +LF  M  +GV P+   FNTL+
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLI 335



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 82/169 (48%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           PT+ TYN L +      + +  L +F  +  + +  +  +YN  IDG  K G + +A +L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +        +  YS LI+GLCK  +++ A  + + +   G+ PN +TYN +IHG+  
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G   ++  +F +M +  + P+    N+ M    ++    +  ++   M
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 284



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 35/245 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           M EA  LLD M   GV P+ + Y+TL+DG+C  G ID A                     
Sbjct: 485 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNI 544

Query: 40  --------------RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                         +E+F  M  +G   ++ TY T++ G C+    +E+  L  ++ S  
Sbjct: 545 ILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMN 604

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           ++  ++T+N +   +F++ + + A +LF  +    +     TY   I  L K     +A 
Sbjct: 605 VKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDAD 664

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            LF ++    C       + +I  L   G++  A      + + G++P   T +++I+ F
Sbjct: 665 NLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 724

Query: 206 CNDGQ 210
             +G+
Sbjct: 725 SVNGK 729



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 38/116 (32%)

Query: 179 AWELFQSLPRVG---LMPNVVTYNIMIH-------------------------------- 203
           A ELF+ + R       P + TYNI+I+                                
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158

Query: 204 ---GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              GF  +G++DKAHDLF  ME +G+ PN VT+++L+ G  +  E  K   +L +M
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM 214


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 132/236 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M  +G +P+ F Y+ LID  C  G++  A  L   M+I+GC  NV+TYNTLI+
Sbjct: 298 AIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLID 357

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K +EE+  ++ +M  +G+    VTYNTL  GL +  +V+ A +L D+M    +  
Sbjct: 358 GFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKP 417

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ +   C+ G I +AA++ +T+    CE  I  Y  LI GLCK G++E A  L 
Sbjct: 418 DKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLL 477

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +S+   G++     YN +I       +  +A  LF +ME KG  P+  T+  +  G
Sbjct: 478 RSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRG 533



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 124/240 (51%), Gaps = 1/240 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M   G   N   Y+TLIDGFC   +I+ A E+F  M+I G   N VTYNT
Sbjct: 330 LQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNT 389

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK++ V+E+  L  +M+ +G++P   TYN++         ++ A  +   M  + 
Sbjct: 390 LIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNG 449

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I GLCK G +  A+ L R++++    L   AY+ +I  L K  + + A 
Sbjct: 450 CEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAM 509

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND-GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +   G  P+  TY I+  G  N  G + +A D  ++M  KG  P   +F  L  G
Sbjct: 510 RLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEG 569



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 133/267 (49%), Gaps = 16/267 (5%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +++ M   G+ P+   ++TL+ GF   G +D A  +   M   GC    VT N L++G+C
Sbjct: 215 VMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFC 274

Query: 67  KTKDVEESLN----------------LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           K   +EE+L+                LY+EM +KG +P   TYN L   L    +++ AL
Sbjct: 275 KEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEAL 334

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
            L  EM+ S  A    TYNT IDG CKN  I EA E+F  + +         Y+ LIDGL
Sbjct: 335 GLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGL 394

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK  +++ A +L   +   GL P+  TYN M+  FC +G + KA D+   M + G  P+ 
Sbjct: 395 CKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDI 454

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMD 257
           VT+ TL+ G  +         LL  + 
Sbjct: 455 VTYGTLIGGLCKAGRVEVASRLLRSIQ 481



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 16/262 (6%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +G++P+   ++ LI   C   +I  A  +   M   G + +  T+ TL+ G+ +  +
Sbjct: 184 MVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGN 243

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL----------------KLFD 114
           ++ +  +  +ML  G   T VT N L HG  +  ++E AL                +L++
Sbjct: 244 MDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYN 303

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM++     +  TYN  ID LC  G + EA  L R + +  C   +  Y+ LIDG CK  
Sbjct: 304 EMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNK 363

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           K+E A E+F  +   GL  N VTYN +I G C   ++ +A  L   M  +G+ P+  T+N
Sbjct: 364 KIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYN 423

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
           +++    R  +  K  +++  M
Sbjct: 424 SMLTYFCREGDIQKAADIVQTM 445



 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 20/252 (7%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           F+ + L+DG     ++     +  +M   G   +V T+N LI   CK   +  ++ +  E
Sbjct: 163 FLLNVLVDG----NKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEE 218

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M S G+ P   T+ TL  G  E   ++ A ++ ++M  +       T N  + G CK G 
Sbjct: 219 MSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGR 278

Query: 141 IVE----------------AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           I E                A EL+  ++   C+     Y+ LID LC  GKL+ A  L +
Sbjct: 279 IEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLR 338

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +   G   NV+TYN +I GFC + ++++A ++F  ME +G++ N VT+NTL+ G  ++ 
Sbjct: 339 EMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSR 398

Query: 245 ETSKVVELLHRM 256
              +  +L+ +M
Sbjct: 399 RVQEAAQLMDQM 410


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 134/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  +L   M   GV P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 193 LDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   +  A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+  C  G + K   L  +M+  G AP+ VT+N LM G
Sbjct: 373 KMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 115/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L + +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   KL   M 
Sbjct: 145 FNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMH 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   +  A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G +++AHDL  +M  KG+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQEN 347



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 126/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L   FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D++E 
Sbjct: 137 GYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L S M + G+ P V TY+ L +GL +  +++ A +LFDEM    +     T+ T IDG
Sbjct: 197 FKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDG 256

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L  A +L   +   GL P+
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPD 316

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    +++ 
Sbjct: 317 KITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMR 376

Query: 255 RM 256
            M
Sbjct: 377 EM 378



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 116/244 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 129 FYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E  +L   +        +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 189 RLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGV 248

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  + ++  +L+  M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEM 308

Query: 257 DERN 260
             + 
Sbjct: 309 SMKG 312


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 141/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   ++DL+I  G RPN   +++L+DG+CL G +  A  L  SM+  G   ++ TYNTL+
Sbjct: 523 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 582

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L L+ +ML K +  T V+YN + HGLF+  +   A ++F EM  S +A
Sbjct: 583 DGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA 642

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY T + GLC+N    EA  L   L  +  +  I  ++ +I  + K+G+ + A EL
Sbjct: 643 VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKEL 702

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+P ++TY +MI     +   + A +LF  ME     P+    N ++   + 
Sbjct: 703 FAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLN 762

Query: 243 NNETSKVVELLHRMDER 259
             E +K    L ++D++
Sbjct: 763 KGEVAKAGNYLSKIDKK 779



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 141/246 (57%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+ P+ F Y+ LIDGF   GE+D+A +LF  M+  G M NVVTY++LING CKTK+
Sbjct: 215 LLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKE 274

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++  +  +M+  G+RP  +TYN L HG       + ++++F EM  S +  +    N+
Sbjct: 275 MDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNS 334

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F+  LCK+G I EA ++F ++ +   +  + +Y  L+ G    G +     LF  +   G
Sbjct: 335 FMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG 394

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++P+   +N +I+ +   G MDK+  +F DM  +GV P+ +TF+T++    R       +
Sbjct: 395 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAM 454

Query: 251 ELLHRM 256
           E  + M
Sbjct: 455 EKFNHM 460



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 135/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD++  + + M ++GV P+   +ST+I  FC  G +D A E F  M   G   +   Y+ 
Sbjct: 415 MDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSC 474

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY-NTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G C  +D+ ++  L S+MLSKGI P  + +  ++ + L +  +V     + D + H+
Sbjct: 475 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHT 534

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  T+N+ +DG C  G + EA  L  ++  +  E  I  Y+ L+DG CK G+++ A
Sbjct: 535 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 594

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+ +    +    V+YNI++HG     +   A ++F +M   G+A +  T+ T++ G
Sbjct: 595 LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGG 654

Query: 240 CIRNNETSKVVELLHRM 256
             RNN T +   LL ++
Sbjct: 655 LCRNNCTDEANMLLEKL 671



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M+ +G +P+   Y  L+ G+   G I     LF  M   G + +   +NT
Sbjct: 345 IKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNT 404

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN Y +   +++SL ++ +M  +G+ P ++T++T+      + +++ A++ F+ M  + 
Sbjct: 405 LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG 464

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL----------------FRTLRVLKCELGIEA-- 162
           V  +T+ Y+  I G C    +V+A EL                F ++    C+ G  A  
Sbjct: 465 VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 524

Query: 163 ------------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                             ++ L+DG C +G ++ A  L  S+  VG+ P++ TYN ++ G
Sbjct: 525 KDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDG 584

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +C  G++D A  LF DM  K V    V++N ++ G  +   T    E+ H M E
Sbjct: 585 YCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 638



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 136/298 (45%), Gaps = 39/298 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M ++G+ PN   YS+LI+G C T E+D+A  +   M   G   N +TYN 
Sbjct: 240 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 299

Query: 61  LINGY-----------------------------------CKTKDVEESLNLYSEMLSKG 85
           LI+GY                                   CK   ++E+ +++  M+ KG
Sbjct: 300 LIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKG 359

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +P V++Y  L HG      +     LF+ M    V  +   +NT I+   + G + ++ 
Sbjct: 360 PKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSL 419

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +F  +        I  +S +I   C++G+L+ A E F  +   G+ P+   Y+ +I G 
Sbjct: 420 LMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQ 479

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI----RNNETSKVVELLHRMDER 259
           CN   + KA +L  DM +KG+ P C+ F T ++  +    R  E   VV+L+    +R
Sbjct: 480 CNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQR 537



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 116/220 (52%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P  + Y+ LI+ +      D    +F  +   G   +V +YN LI+G+ K  +V+++ +L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M  +GI P VVTY++L +GL +  +++ A ++  +M  + V     TYN  I G   
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           +G   E+  +F+ +        +   +  +  LCK G+++ A ++F S+   G  P+V++
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           Y  ++HG+   G +    +LF  M  +GV P+   FNTL+
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLI 406



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 82/169 (48%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           PT+ TYN L +      + +  L +F  +  + +  +  +YN  IDG  K G + +A +L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +        +  YS LI+GLCK  +++ A  + + +   G+ PN +TYN +IHG+  
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G   ++  +F +M +  + P+    N+ M    ++    +  ++   M
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 355



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 35/245 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           M EA  LLD M   GV P+ + Y+TL+DG+C  G ID A                     
Sbjct: 556 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNI 615

Query: 40  --------------RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                         +E+F  M  +G   ++ TY T++ G C+    +E+  L  ++ S  
Sbjct: 616 ILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMN 675

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           ++  ++T+N +   +F++ + + A +LF  +    +     TY   I  L K     +A 
Sbjct: 676 VKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDAD 735

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            LF ++    C       + +I  L   G++  A      + + G++P   T +++I+ F
Sbjct: 736 NLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 795

Query: 206 CNDGQ 210
             +G+
Sbjct: 796 SVNGK 800



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 38/116 (32%)

Query: 179 AWELFQSLPRVG---LMPNVVTYNIMIH-------------------------------- 203
           A ELF+ + R       P + TYNI+I+                                
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229

Query: 204 ---GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              GF  +G++DKAHDLF  ME +G+ PN VT+++L+ G  +  E  K   +L +M
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM 285


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  +L  M   GVRP+ + Y++L+DG+C  G +++A E + +M  NG     +TYN 
Sbjct: 400 MVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNA 459

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C    ++++L L+  ML KGI P  ++ +TL  G F+  + E AL L+ E     
Sbjct: 460 LLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARG 519

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A  T+T+NT I+GLCK   + EA EL   ++  +C   I  Y  L  G CKIG ++ A 
Sbjct: 520 LAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRAS 579

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   L  +G  P +  +N +I G     Q  K +D+  +M  +G++PN V +  L+ G 
Sbjct: 580 RILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGW 639

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +      L   M E+
Sbjct: 640 CKEGDLHTAYNLYLEMIEK 658



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A+RLL+ M+   ++ N FVY+ +I+G+C  G +  A  +   M   G   +  +YN+
Sbjct: 365 MEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNS 424

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYCK   + ++   Y+ ML  G   T +TYN L  G   +  ++ AL+L+  M    
Sbjct: 425 LVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKG 484

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    + +T +DG  K+G   +A  L++             ++ +I+GLCKI ++  A 
Sbjct: 485 IAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAE 544

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + +    P+++TY  +  G+C  G MD+A  +  ++E  G AP    FN+L+ G 
Sbjct: 545 ELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGH 604

Query: 241 IRNNETSKVVELLHRMDER 259
               +  KV ++L  M  R
Sbjct: 605 FIAKQHGKVNDILFEMSNR 623



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 134/250 (53%), Gaps = 1/250 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A   ++ M + GV  N   Y  +++G+C  G+ + AR +  S+   G   N+VTY  L+ 
Sbjct: 262 ALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVK 321

Query: 64  GYCKTKDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           GYC  K++EE+  +  E+  +K +      +  + +G  ++ ++E A +L +EM  S + 
Sbjct: 322 GYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQ 381

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YN  I+G CK G +VEA  +   +  +       +Y+ L+DG CK G +  A+E 
Sbjct: 382 VNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFET 441

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           + ++ R G     +TYN ++ GFC+ G +D A  L+  M  KG+APN ++ +TL+ G  +
Sbjct: 442 YNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFK 501

Query: 243 NNETSKVVEL 252
           + +T K + L
Sbjct: 502 SGKTEKALNL 511



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 134/284 (47%), Gaps = 26/284 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD ASR+L+ +   G  P    +++LI G  +  +  +  ++   M   G   N V Y  
Sbjct: 575 MDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGA 634

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK  D+  + NLY EM+ KG+ P +   ++L    +   + + A  +   +  +D
Sbjct: 635 LIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTD 694

Query: 121 VAAETST--------------------------YNTFIDGLCKNGYIVEAAELFRTLRVL 154
           +  + S                           +N  I GLCK G I +A  L   L+  
Sbjct: 695 MIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDK 754

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                   YS LI G    G ++ A++L  ++  VGL PN+VTYN +I+G C  G++ +A
Sbjct: 755 GFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRA 814

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             LF  +  KG++PN +T+NTL+    ++   ++  +L  RM E
Sbjct: 815 VSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIE 858



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 122/258 (47%), Gaps = 26/258 (10%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL-------------------------FVS 45
           MI++G+ PN F+ S+L+  F   G+ D A  +                         F+ 
Sbjct: 655 MIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFID 714

Query: 46  MDINGCMHNV-VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
               G  H+  + +N +I G CK   +E++ NL +++  KG      TY++L HG     
Sbjct: 715 TVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASG 774

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
            V+ A  L D M    +     TYN+ I GLCK+G +  A  LF+ L           Y+
Sbjct: 775 FVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYN 834

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LID  CK G +  A++L Q +   G+ P V TY+I+I+G C  G M++A  L   M   
Sbjct: 835 TLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIEN 894

Query: 225 GVAPNCVTFNTLMLGCIR 242
            V PN VT+ TL+ G +R
Sbjct: 895 NVDPNYVTYWTLIQGYVR 912



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 124/257 (48%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ D M   G R +    +++++    TG++     +F  M   G + +  T   
Sbjct: 189 LDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAI 248

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +   YCK K V  +L    EM   G+   +V Y+ + +G  E+ Q   A ++ D +    
Sbjct: 249 MAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRG 308

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-YSCLIDGLCKIGKLETA 179
            +    TY   + G C    + EA  + + +R  K  +  EA +  +I+G C++G++E A
Sbjct: 309 FSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDA 368

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L   +    L  N+  YNIMI+G+C  G+M +AH++  +M   GV P+  ++N+L+ G
Sbjct: 369 ARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDG 428

Query: 240 CIRNNETSKVVELLHRM 256
             +    +K  E  + M
Sbjct: 429 YCKKGLMNKAFETYNTM 445



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 26/276 (9%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RG+ PN   Y  LI G+C  G++  A  L++ M   G + N+   ++L++ + +   
Sbjct: 620 MSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGK 679

Query: 71  VEESLNLYSEMLSKGIRPTV--------------------------VTYNTLFHGLFEIH 104
            +E+  +   ++   + P +                          + +N +  GL ++ 
Sbjct: 680 FDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLG 739

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           ++E A  L  +++     A+  TY++ I G   +G++  A +L  T+  +     I  Y+
Sbjct: 740 RIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYN 799

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LI GLCK G+L  A  LF+ L   G+ PN +TYN +I   C DG + +A  L   M  +
Sbjct: 800 SLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEE 859

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G+ P   T++ L+ G        + ++LL +M E N
Sbjct: 860 GIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENN 895



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 77/137 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L D M+  G+ PN   Y++LI G C +GE+ RA  LF  +   G   N +TYNT
Sbjct: 776 VDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNT 835

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK   + E+  L   M+ +GI PTV TY+ L +GL     +E A+KL D+M  ++
Sbjct: 836 LIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENN 895

Query: 121 VAAETSTYNTFIDGLCK 137
           V     TY T I G  +
Sbjct: 896 VDPNYVTYWTLIQGYVR 912



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  LL  +  +G   + F YS+LI G   +G +D A +L  +M   G   N+VTYN+
Sbjct: 741 IEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNS 800

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK+ ++  +++L+ ++ +KGI P  +TYNTL     +   +  A KL   M    
Sbjct: 801 LIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEG 860

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           +     TY+  I+GLC  GY+ EA +L   +     +     Y  LI G  +
Sbjct: 861 IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 2/208 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +  +++ L+        ++ +L ++ EM + G R ++ + N++ + L +   +   + +F
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           ++MQ +    +  T        CK   +V A E    +  +  E+ + AY  +++G C++
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVT 232
           G+   A  +  SLP  G  PN+VTY +++ G+CN+  M++A  +  ++   K +  +   
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 233 FNTLMLGCIRNNETSKVVELLHRM-DER 259
           F  ++ G  +         LL+ M D R
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSR 379



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 55/115 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  L   +  +G+ PNA  Y+TLID  C  G I  A +L   M   G    V TY+ 
Sbjct: 811 LSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSI 870

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           LING C    +EE++ L  +M+   + P  VTY TL  G      V+  +   D+
Sbjct: 871 LINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 5/153 (3%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
            H ++++ E   S      ++++  +  L   G +  A ++F  +R L C L + + + +
Sbjct: 160 PHLVEVYKEFSFS-----AASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSI 214

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           ++ L + G L     +F+ + R G +P+  T  IM   +C    +  A +   +M   GV
Sbjct: 215 LNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGV 274

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             N V ++ +M G     +T+    +L  +  R
Sbjct: 275 EVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGR 307


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 144/263 (54%), Gaps = 38/263 (14%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L + MI+  + PN F Y++LI+GFC+ G +D AR++F  M+  GC  +VV Y +LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324

Query: 63  NGYCKTKDVEESLNLY-----------------------------------SEMLSKGIR 87
           NG+CK K V++++ ++                                   S M+S+G+ 
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD---VAAETSTYNTFIDGLCKNGYIVEA 144
           P + TYN L H L    +V+ AL +F++MQ  +   VA    TYN  + GLC NG + +A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             +F  +R  + ++GI  Y+ +I G+CK GK++ A  LF SLP  G+ PNVVTY  MI G
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504

Query: 205 FCNDGQMDKAHDLFLDMEAKGVA 227
              +G   +AH LF  M+  GV+
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGVS 527



 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  +++ M++ G++P+  +Y+T+ID  C  G ++ A  LF  M+  G   +VV Y +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG C +    ++ +L   M  + I+P V+T+N L     +  +   A +L++EM    
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TY + I+G C  G + EA ++F  +    C   + AY+ LI+G CK  K++ A 
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  + + GL  N +TY  +I GF   G+ + A ++F  M ++GV PN  T+N L+   
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397

Query: 241 IRNNETSKVVELLHRMDER 259
             N +  K + +   M +R
Sbjct: 398 CYNGKVKKALMIFEDMQKR 416



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 135/245 (55%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  + +  + L++ FC + +   A      M   G   ++VT+ +LING+C    +EE+
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           +++ ++M+  GI+P VV Y T+   L +   V +AL LFD+M++  +  +   Y + ++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC +G   +A  L R +   K +  +  ++ LID   K GK   A EL+  + R+ + PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           + TY  +I+GFC +G +D+A  +F  ME KG  P+ V + +L+ G  +  +    +++ +
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341

Query: 255 RMDER 259
            M ++
Sbjct: 342 EMSQK 346



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 131/256 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS  L  M++ G  P+   +++LI+GFCL   ++ A  +   M   G   +VV Y T+I+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK   V  +L+L+ +M + GIRP VV Y +L +GL    +   A  L   M    +  
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+N  ID   K G  ++A EL+  +  +     I  Y+ LI+G C  G ++ A ++F
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G  P+VV Y  +I+GFC   ++D A  +F +M  KG+  N +T+ TL+ G  + 
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365

Query: 244 NETSKVVELLHRMDER 259
            + +   E+   M  R
Sbjct: 366 GKPNVAQEVFSHMVSR 381



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 19/272 (6%)

Query: 4   ASRLLDLMIQRGVRPN---AFVYSTLID------GFCLTGEIDR----------ARELFV 44
           A R   L   R V+ N   A  +S L+D       FC   EI R          A +LF 
Sbjct: 2   AMRFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFT 61

Query: 45  SMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
            M  +  + +++ +  L+N   K K  +  +NL   +   G+   + T N L +   +  
Sbjct: 62  HMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSS 121

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           Q   A     +M       +  T+ + I+G C    + EA  +   +  +  +  +  Y+
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +ID LCK G +  A  LF  +   G+ P+VV Y  +++G CN G+   A  L   M  +
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            + P+ +TFN L+   ++  +     EL + M
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 104/228 (45%)

Query: 32  LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
           + G   +A      +D++  +     Y  ++     +    E+L+L++ M+     P+++
Sbjct: 14  VKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSII 73

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
            +  L + + ++ + +  + L D +Q   V+ +  T N  ++  C++     A+     +
Sbjct: 74  DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
             L  E  I  ++ LI+G C   ++E A  +   +  +G+ P+VV Y  +I   C +G +
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + A  LF  ME  G+ P+ V + +L+ G   +        LL  M +R
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 132/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M   GV PN F+Y+ LI+  C  G+ID+A+ +F  MD  G   N   Y  +ING+ 
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K    ++   LY +M   G+ P + TYN+L        ++  A K+FDE+    VA    
Sbjct: 189 KKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAV 248

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I GLC+ G + +A  L   ++          ++ L+DGLC  G+L+ A    + L
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKL 308

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL P +VTYNI+I GF   G      +L  +ME +G++P+ VT+  LM   +R+++ 
Sbjct: 309 KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDI 368

Query: 247 SKVVELLHRM 256
            K  E+ H M
Sbjct: 369 EKAYEMFHLM 378



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M   G+  N ++Y+ +I+GF   G      EL+  M + G + N+ TYN+
Sbjct: 158 IDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNS 217

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YC+   +  +  ++ E+  +G+    VTYN L  GL    QV  A  L + M+ + 
Sbjct: 218 LITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAH 277

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK----- 175
           +   T T+N  +DGLC  G + +A      L+++     +  Y+ LI G  K+G      
Sbjct: 278 INPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVS 337

Query: 176 ------------------------------LETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                                         +E A+E+F  + R+GL+P+  TY ++IHG 
Sbjct: 338 ELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGL 397

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C  G M +A  L+  M    + PN V +NT++ G  +   + K ++ L  M
Sbjct: 398 CIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM 448



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 1/249 (0%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
             LM+ +G  P++F ++  +D    +G +DR    F    +     +V ++   I  +C+
Sbjct: 61  FKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEY-LGRTQFDVYSFWITIKAFCE 119

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             +V +   L ++M + G+ P V  Y  L         ++ A  +F  M    +AA    
Sbjct: 120 NGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYI 179

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y   I+G  K GY  +  EL++ ++++     +  Y+ LI   C+ GKL  A+++F  + 
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           + G+  N VTYNI+I G C  GQ+ KA  L   M+   + P   TFN LM G     +  
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299

Query: 248 KVVELLHRM 256
           K +  L ++
Sbjct: 300 KALSYLEKL 308



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 117/241 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + + +   I  FC  G + +  EL   M+  G   NV  Y  LI   C+  D++++  ++
Sbjct: 106 DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
           S M   G+      Y  + +G F+    +   +L+ +M+   V     TYN+ I   C++
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G +  A ++F  +           Y+ LI GLC+ G++  A  L + + R  + P   T+
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N+++ G CN GQ+DKA      ++  G+ P  VT+N L+ G  +   +S V EL+  M++
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345

Query: 259 R 259
           R
Sbjct: 346 R 346



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 2/256 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ D + +RGV  NA  Y+ LI G C  G++ +A  L   M          T+N L++
Sbjct: 231 AFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMD 290

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C T  ++++L+   ++   G+ PT+VTYN L  G  ++       +L  EM+   ++ 
Sbjct: 291 GLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP 350

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   ++   ++  I +A E+F  ++ +        Y  LI GLC  G +  A +L+
Sbjct: 351 SKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLY 410

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF-NTLMLGCIR 242
           +S+  + L PN V YN MI+G+C +    KA     +M   GV PN  ++ +T+ + C +
Sbjct: 411 KSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILC-K 469

Query: 243 NNETSKVVELLHRMDE 258
           + ++ +   LL  M E
Sbjct: 470 DGKSIEAKRLLKEMTE 485



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL+ M +  + P    ++ L+DG C TG++D+A      + + G    +VTYN 
Sbjct: 263 VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNI 322

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K  +      L  EM  +GI P+ VTY  L +       +E A ++F  M+   
Sbjct: 323 LISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIG 382

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I GLC  G +VEA++L++++  +  +     Y+ +I+G CK      A 
Sbjct: 383 LVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKAL 442

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           +  + + + G+ PNV +Y   I   C DG+  +A  L  +M   G+ P
Sbjct: 443 KFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 34/232 (14%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH------------GLF----- 101
           + +IN   +++ +E+SL+ +  M+ KG  P+  ++N                G F     
Sbjct: 42  DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101

Query: 102 -----------------EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
                            E   V    +L  +M+   V+     Y   I+  C+NG I +A
Sbjct: 102 RTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQA 161

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             +F  +  L        Y+ +I+G  K G  +  +EL+Q +  VG++PN+ TYN +I  
Sbjct: 162 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITE 221

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +C DG++  A  +F ++  +GVA N VT+N L+ G  R  + SK   LL RM
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)

Query: 162 AYSCLIDGLCKIGKLETAWELF-QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
           +++  +D L K G L+  W  F + L R     +V ++ I I  FC +G + K  +L   
Sbjct: 75  SFNNALDLLAKSGNLDRTWGFFTEYLGRTQF--DVYSFWITIKAFCENGNVSKGFELLAQ 132

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           ME  GV+PN   +  L+  C RN +  +   +  RMD+
Sbjct: 133 METMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDD 170


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 140/258 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   ++D+M+Q G RPN   +++L++G+CL G ++ A  L  +M   G   N   Y TL+
Sbjct: 384 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 443

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L ++ +ML KG++PT V Y+ + HGLF+  +   A K+F EM  S   
Sbjct: 444 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 503

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   + GLC+N    EA  L   L  +  +  I  ++ +I  + K+G+ + A EL
Sbjct: 504 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 563

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PN+ TY++MI     +   ++A +LF+ +E  G A +    N ++   + 
Sbjct: 564 FDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLN 623

Query: 243 NNETSKVVELLHRMDERN 260
             E +K    L  + E N
Sbjct: 624 KAEVAKASNYLSIIGENN 641



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 134/253 (52%), Gaps = 1/253 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + +LM+ +G+ PN  V++ LI+ +   G +D+A  +F  M   G + + VT+ T+I+  C
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 306

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++++L+ ++ M+  G+ P+   Y  L  G     ++  A +L  EM + D+     
Sbjct: 307 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 366

Query: 127 TY-NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            Y ++ I+ LCK G + E  ++   +        +  ++ L++G C +G +E A+ L  +
Sbjct: 367 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 426

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +  +G+ PN   Y  ++ G+C +G++D A  +F DM  KGV P  V ++ ++ G  +   
Sbjct: 427 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 486

Query: 246 TSKVVELLHRMDE 258
           T+   ++ H M E
Sbjct: 487 TTAAKKMFHEMIE 499



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  ++  M+  G+ P+ F YS +IDG C +  +D+A  +   M   G   N +TYN+
Sbjct: 99  MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 158

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY  +    ES+ ++ +M S G+ PTV   N+  H LF+  +   A  +FD M    
Sbjct: 159 LIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG 218

Query: 121 VAAETSTYNTFIDGL--CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
              +  +Y+T + G     +  + +   +F  +           ++ LI+   + G ++ 
Sbjct: 219 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 278

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +F+ +   G++P+ VT+  +I   C  G++D A   F  M   GV P+   +  L+ 
Sbjct: 279 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 338

Query: 239 GCIRNNETSKVVELLHRM 256
           GC  + E  K  EL+  M
Sbjct: 339 GCCNHGELVKAKELISEM 356



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 126/239 (52%), Gaps = 2/239 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+++GV P   + +++I   C   E+D+A  +   M  +G   ++ TY+ 
Sbjct: 64  VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+K ++++  +  +M+  G RP  +TYN+L HG         ++++F +M    
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 183

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK--LET 178
           V       N+FI  L K+G   EA  +F ++ +   +  I +YS ++ G        L  
Sbjct: 184 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 243

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              +F  +   G+ PN   +NI+I+ +   G MDKA  +F DM+ KG+ P+ VTF T++
Sbjct: 244 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 302



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 129/251 (51%), Gaps = 3/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+ P+ F YS LI GF   GE+D+A  LF+ M   G +  ++  N++I   CK K+
Sbjct: 40  LLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE 98

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++ ++  +M+  GI P + TY+ +  GL +   ++ A ++ ++M  +     + TYN+
Sbjct: 99  MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 158

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G   +G   E+  +F+ +        ++  +  I  L K G+   A  +F S+   G
Sbjct: 159 LIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG 218

Query: 191 LMPNVVTYNIMIHGF--CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             P++++Y+ M+HG+    D  +   H++F  M  KG+APN   FN L+    R     K
Sbjct: 219 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 278

Query: 249 VVELLHRMDER 259
            + +   M  +
Sbjct: 279 AMLIFEDMQNK 289



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 1/152 (0%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           PT+ TYN L      +H+ +  L +   +  + +  +  +Y + I G  K+G + +A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +        I   + +I  LCK+ +++ A  + Q +   G+ P++ TY+++I G C 
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              MDKA  +   M   G  PN +T+N+L+ G
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 162



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA+ LL+ +    V+ +   ++ +I      G    A+ELF ++   G + N+ TY+ +
Sbjct: 523 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 582

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    K +  EE+ NL+  +   G        N +   L    +V  A      +  +++
Sbjct: 583 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 642

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELF 148
             E ST +       + G   E  +L 
Sbjct: 643 TLEASTISLLASLFSREGKYREHIKLL 669


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 142/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +LL  M   G+ PN   Y+ +I+G C  G I+    +   MD  G   + VTYNT
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYCK  +  ++L L+SEML  G+ P VVTY +L + + +   +  A++ FD+M    
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + I+G  + G++ EA  ++  +        I  Y+ L++G C  G++E A 
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   GL P+VV+Y+ +I GFC   ++D+A  +  +M  KGV+P+ +T+++L+ G 
Sbjct: 434 GLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL 493

Query: 241 IRNNETSKVVELLHRM 256
                 ++  +L   M
Sbjct: 494 CEQRRLNEACDLFQEM 509



 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 134/256 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++   MI  GV  N F Y+ LI GFC  G ++     F  M+ N C+ NVVTYNT+I 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            YCK K ++E+  L   M  +G+ P ++TYN + +GL  + ++E    +  EM     A 
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT ++G CK G   +A  L   +        +  Y+ LI+ +CK G L  A E F
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL PN VTY  +I+GF   G MD+A+ ++ +M   G  P  VT+N L+ G   +
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 244 NETSKVVELLHRMDER 259
               + + LL  M+ +
Sbjct: 427 GRMEEAIGLLRGMEGK 442



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 137/254 (53%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R  + M +    PN   Y+T+I  +C    ID A +L  SM + G   N++TYN +ING 
Sbjct: 224 RFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGL 283

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C+   +EE+  + +EM  KG  P  VTYNTL +G  ++     AL L  EM  + +  + 
Sbjct: 284 CRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDV 343

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY + I+ +CK G +  A E F  + V         Y+ LI+G  + G ++ A+ ++  
Sbjct: 344 VTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDE 403

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + R G  P +VTYN +++G C  G+M++A  L   ME KG++P+ V+++T++ G  R  E
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463

Query: 246 TSKVVELLHRMDER 259
             +  ++   M E+
Sbjct: 464 LDRAFQMNAEMVEK 477



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 134/241 (55%), Gaps = 2/241 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A    D M  RG+RPN   Y++LI+GF   G +D A  ++  M  +G    +VTYN 
Sbjct: 359 LNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNA 418

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C +  +EE++ L   M  KG+ P VV+Y+T+  G     +++ A ++  EM    
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIGKLETA 179
           V+ +  TY++ I GLC+   + EA +LF+ + + K  L  E  Y+ LI+G CK G L  A
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEM-LNKSLLPDEFTYTSLINGYCKEGDLNEA 537

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L   + + G +P+ VTYN++I+G     +  +A  L L +      PN +T++TL+  
Sbjct: 538 LNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES 597

Query: 240 C 240
           C
Sbjct: 598 C 598



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 135/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ P+   Y++LI+  C  G ++RA E F  M + G   N VTY +LING+ +   
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E+  ++ EM+  G  PT+VTYN L +G     ++E A+ L   M+   ++ +  +Y+T
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G C+   +  A ++   +           YS LI GLC+  +L  A +LFQ +    
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L+P+  TY  +I+G+C +G +++A +L  +M  KG  P+ VT+N L+ G  +   T +  
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573

Query: 251 ELLHRM 256
            LL ++
Sbjct: 574 RLLLKL 579



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 142/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E S +L  M ++G  P+   Y+TL++G+C  G   +A  L   M  NG   +VVTY +
Sbjct: 289 IEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTS 348

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK  ++  ++  + +M  +G+RP  VTY +L +G  +   ++ A +++DEM  S 
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  ++G C +G + EA  L R +        + +YS +I G C+  +L+ A+
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G+ P+ +TY+ +I G C   ++++A DLF +M  K + P+  T+ +L+ G 
Sbjct: 469 QMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528

Query: 241 IRNNETSKVVELLHRMDER 259
            +  + ++ + L   M ++
Sbjct: 529 CKEGDLNEALNLHDEMIKK 547



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 129/252 (51%), Gaps = 15/252 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  LL  M  +G+ P+   YST+I GFC   E+DRA ++   M   G   + +TY++
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSS 488

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+ + + E+ +L+ EML+K + P   TY +L +G  +   +  AL L DEM    
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKCELGIEAYSC 165
              +T TYN  I+GL K     EA  L               + TL     ++  ++   
Sbjct: 549 FLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVA 608

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI G C  G +  A ++F+S+ +    PN   YN++IHG C DG + KAH L+ +M   G
Sbjct: 609 LIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFG 668

Query: 226 VAPNCVTFNTLM 237
             P+ VT   L+
Sbjct: 669 FIPHTVTIIALV 680



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 15/271 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA R+ D MI+ G  P    Y+ L++G C++G ++ A  L   M+  G   +VV+Y+T
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G+C+ ++++ +  + +EM+ KG+ P  +TY++L  GL E  ++  A  LF EM +  
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I+G CK G + EA  L   +           Y+ LI+GL K  +   A 
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573

Query: 181 ELFQSLPRVGLMPNVVTYNIMIH---------------GFCNDGQMDKAHDLFLDMEAKG 225
            L   L     +PN +TY+ +I                GFC  G M++A  +F  M  + 
Sbjct: 574 RLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             PN   +N ++ G  R+    K  +L   M
Sbjct: 634 QKPNEAVYNVIIHGHCRDGNVHKAHKLYKEM 664



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 1/225 (0%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCK-TKDVEESLNLYSEMLSKGIRPTVVTYN 94
           I++A  +     +NG M  V++YN +++   +  K V  +  +Y EM++ G+   V +YN
Sbjct: 148 IEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYN 207

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            L  G      +E  L+ F+EM+ +       TYNT I   CK   I EA +L R++ + 
Sbjct: 208 ILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE 267

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             E  +  Y+ +I+GLC++G++E    +   + R G  P+ VTYN +++G+C  G   +A
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             L  +M   G+ P+ VT+ +L+    +    ++ +E   +M  R
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR 372



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 17/210 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D MI++G  P+   Y+ LI+G         A+ L + +  +  + N +TY+T
Sbjct: 534 LNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDT 593

Query: 61  LI---------------NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           LI                G+C    + E+  ++  M+ +  +P    YN + HG      
Sbjct: 594 LIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGN 653

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYS 164
           V  A KL+ EM        T T    +  L   G   +   + R + +  C+L   E   
Sbjct: 654 VHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDI-LRSCKLSDAELSK 712

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            L+    K G ++  + L   + + G +P+
Sbjct: 713 ALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 140/259 (54%), Gaps = 3/259 (1%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           E  +  DL+++    G  PN  +Y+TLIDG C  GEI++A++LF  M   G + N  TY 
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+G  K    ++   +Y +M   G+ P + TYN + + L +  + + A K+FDEM+  
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRER 297

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V+    TYNT I GLC+     EA E+   ++       +  Y+ LIDG C + KL  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKA 357

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L + L   GL P++VTYNI++ GFC  G    A  +  +ME +G+ P+ VT+  L+  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDT 417

Query: 240 CIRNNETSKVVELLHRMDE 258
             R++   K ++L   M+E
Sbjct: 418 FARSDNMEKAIQLRSSMEE 436



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 133/253 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + + M + GV PN   Y+ +++  C  G    A ++F  M   G   N+VTYNTLI G C
Sbjct: 255 MYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +     E+  +  +M S GI P ++TYNTL  G   + ++  AL L  +++   ++    
Sbjct: 315 REMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLV 374

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  + G CK G    A ++ + +     +     Y+ LID   +   +E A +L  S+
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSM 434

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL P+V TY+++IHGFC  G+M++A  LF  M  K   PN V +NT++LG  +   +
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSS 494

Query: 247 SKVVELLHRMDER 259
            + + L   M+E+
Sbjct: 495 YRALRLFREMEEK 507



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 136/241 (56%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + + +  +I G C  GEI+++ +L V +   G   NVV Y TLI+G CK  ++E++ +L+
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM   G+     TY  L HGLF+    +   +++++MQ   V     TYN  ++ LCK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G   +A ++F  +R       I  Y+ LI GLC+  K   A E+   +   G+ PN++TY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I GFC   ++ KA  L  D++++G++P+ VT+N L+ G  +  +TS   +++  M+E
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 259 R 259
           R
Sbjct: 402 R 402



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 134/254 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++ D M +RGV  N   Y+TLI G C   + + A E+   M  +G   N++TYNTLI
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLI 345

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C  + + ++L+L  ++ S+G+ P++VTYN L  G  +      A K+  EM+   + 
Sbjct: 346 DGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   ID   ++  + +A +L  ++  L     +  YS LI G C  G++  A  L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL 465

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+S+      PN V YN M+ G+C +G   +A  LF +ME K + PN  ++  ++    +
Sbjct: 466 FKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525

Query: 243 NNETSKVVELLHRM 256
             ++ +   L+ +M
Sbjct: 526 ERKSKEAEGLVEKM 539



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 116/228 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA+ ++D M   G+ PN   Y+TLIDGFC   ++ +A  L   +   G   ++VTYN L
Sbjct: 320 NEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNIL 379

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G+CK  D   +  +  EM  +GI+P+ VTY  L         +E A++L   M+   +
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGL 439

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+  I G C  G + EA+ LF+++   K E     Y+ ++ G CK G    A  
Sbjct: 440 TPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALR 499

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LF+ +    L PNV +Y  MI   C + +  +A  L   M   G+ P+
Sbjct: 500 LFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS 547



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  +IN Y +++ ++ S+  ++EM+ KG  P    +N L   +            F+E +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  +  ++   I G C+ G I ++ +L   LR       +  Y+ LIDG CK G++E
Sbjct: 157 -IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF  + + GL+ N  TY ++IHG   +G   +  +++  M+  GV PN  T+N +M
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 238 LGCIRNNETSKVVELLHRMDER 259
               ++  T    ++   M ER
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRER 297



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 65/129 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A +L   M + G+ P+   YS LI GFC+ G ++ A  LF SM       N V YNT
Sbjct: 424 MEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNT 483

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ GYCK      +L L+ EM  K + P V +Y  +   L +  + + A  L ++M  S 
Sbjct: 484 MVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSG 543

Query: 121 VAAETSTYN 129
           +    S  N
Sbjct: 544 IGPSDSILN 552


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 132/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M   GV PN F+Y+ LI+  C  G+ID+A+ +F  MD  G   N   Y  +ING+ 
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K    ++   LY +M   G+ P + TYN+L        ++  A K+FDE+    VA    
Sbjct: 189 KKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAV 248

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I GLC+ G + +A  L   ++          ++ L+DGLC  G+L+ A    + L
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKL 308

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL P +VTYNI+I GF   G      +L  +ME +G++P+ VT+  LM   +R+++ 
Sbjct: 309 KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDI 368

Query: 247 SKVVELLHRM 256
            K  E+ H M
Sbjct: 369 EKAYEMFHLM 378



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M   G+  N ++Y+ +I+GF   G      EL+  M + G + N+ TYN+
Sbjct: 158 IDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNS 217

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YC+   +  +  ++ E+  +G+    VTYN L  GL    QV  A  L + M+ + 
Sbjct: 218 LITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAH 277

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK----- 175
           +   T T+N  +DGLC  G + +A      L+++     +  Y+ LI G  K+G      
Sbjct: 278 INPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVS 337

Query: 176 ------------------------------LETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                                         +E A+E+F  + R+GL+P+  TY ++IHG 
Sbjct: 338 ELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGL 397

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C  G M +A  L+  M    + PN V +NT++ G  +   + K ++ L  M
Sbjct: 398 CIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM 448



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 117/241 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + + +   I  FC  G + +  EL   M+  G   NV  Y  LI   C+  D++++  ++
Sbjct: 106 DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
           S M   G+      Y  + +G F+    +   +L+ +M+   V     TYN+ I   C++
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G +  A ++F  +           Y+ LI GLC+ G++  A  L + + R  + P   T+
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N+++ G CN GQ+DKA      ++  G+ P  VT+N L+ G  +   +S V EL+  M++
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345

Query: 259 R 259
           R
Sbjct: 346 R 346



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 2/256 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ D + +RGV  NA  Y+ LI G C  G++ +A  L   M          T+N L++
Sbjct: 231 AFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMD 290

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C T  ++++L+   ++   G+ PT+VTYN L  G  ++       +L  EM+   ++ 
Sbjct: 291 GLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP 350

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   ++   ++  I +A E+F  ++ +        Y  LI GLC  G +  A +L+
Sbjct: 351 SKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLY 410

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF-NTLMLGCIR 242
           +S+  + L PN V YN MI+G+C +    KA     +M   GV PN  ++ +T+ + C +
Sbjct: 411 KSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILC-K 469

Query: 243 NNETSKVVELLHRMDE 258
           + ++ +   LL  M E
Sbjct: 470 DGKSIEAKRLLKEMTE 485



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL+ M +  + P    ++ L+DG C TG++D+A      + + G    +VTYN 
Sbjct: 263 VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNI 322

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K  +      L  EM  +GI P+ VTY  L +       +E A ++F  M+   
Sbjct: 323 LISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIG 382

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I GLC  G +VEA++L++++  +  +     Y+ +I+G CK      A 
Sbjct: 383 LVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKAL 442

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           +  + + + G+ PNV +Y   I   C DG+  +A  L  +M   G+ P
Sbjct: 443 KFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 34/232 (14%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH------------GLF----- 101
           + +IN   +++ +E+SL+ +  M+ KG  P+  ++N                G F     
Sbjct: 42  DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101

Query: 102 -----------------EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
                            E   V    +L  +M+   V+     Y   I+  C+NG I +A
Sbjct: 102 RTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQA 161

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             +F  +  L        Y+ +I+G  K G  +  +EL+Q +  VG++PN+ TYN +I  
Sbjct: 162 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITE 221

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +C DG++  A  +F ++  +GVA N VT+N L+ G  R  + SK   LL RM
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 7/181 (3%)

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           NL SE +    R  V+      +  F+   +E +L  F  M     +  + ++N  +D L
Sbjct: 30  NLNSESVCGRPRDAVI------NASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLL 83

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            K+G +      F T  + + +  + ++   I   C+ G +   +EL   +  +G+ PNV
Sbjct: 84  AKSGNLDRTWGFF-TEYLGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNV 142

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
             Y I+I   C +G +D+A  +F  M+  G+A N   +  ++ G  +        EL  +
Sbjct: 143 FIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQK 202

Query: 256 M 256
           M
Sbjct: 203 M 203


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 140/258 (54%), Gaps = 2/258 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R  D M ++G+  +   Y+TLI+G C  GE+  A ++   M       + VTY  L++
Sbjct: 383 ARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVD 442

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK   + E+  +++ M+ +G+ P VVTY  L  GL +   V+ A +L  EM +  +  
Sbjct: 443 GYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL 502

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ I+GLCK GY+ +A      +     +  +  Y+ LID LCK G+L+ A +L 
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           Q +   G+ P +VTYN++++GFC  G+++    L   M  K + PN  T+N+LM   CI 
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622

Query: 243 NNETSKVVELLHRMDERN 260
           NN  S   E+   M  RN
Sbjct: 623 NNMKS-TTEIYKGMCSRN 639



 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 138/295 (46%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNA-----------------------------------FVYST 25
           ++ A +LLD M+ RGV PNA                                    VY+T
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           ++ GFC  G++  AR  F  M   G   + VTY TLING C+  +++E+  +  EML++ 
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           +    VTY  L  G  +  ++  A ++ + M    VA    TY    DGLCK G +  A 
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EL   +     EL    Y+ LI+GLCK G L+ A      +   GL P+V TY  +I   
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C  G++D+AHDL  +M   G+ P  VT+N LM G   +       +LL  M E+N
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 129/257 (50%), Gaps = 3/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +L D M      P+   Y  LI G+C  GE++ A +L   M   G   N   Y +
Sbjct: 278 VEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTS 334

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   C    V ++L +  +M+   +      Y T+  G      +  A + FDEMQ   
Sbjct: 335 VVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKG 394

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  TY T I+GLC+ G + EA ++ + +   + ++    Y+ L+DG CK GK+  A+
Sbjct: 395 LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAF 454

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++  ++ + G+ PNVVTY  +  G C  G +  A++L  +M  KG+  N  T+N+L+ G 
Sbjct: 455 QVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGL 514

Query: 241 IRNNETSKVVELLHRMD 257
            +     + +  +  MD
Sbjct: 515 CKAGYLDQAMRTMADMD 531



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA ++ + M+QRGV PN   Y+ L DG C  G++  A EL   M   G   N  TYN+
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   +++++   ++M + G++P V TY TL   L +  +++ A  L  EM  + 
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  ++G C +G +    +L   +           Y+ L+   C    +++  
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTT 629

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+++ +    + PN  TYNI+I G C    M +A     +M  KG      +++ L+   
Sbjct: 630 EIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLL 689

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  +L H M
Sbjct: 690 NKKKKFVEARKLFHDM 705



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ LL  M  +G+  NA  Y++LI+G C  G +D+A      MD  G   +V TY TLI+
Sbjct: 488 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLID 547

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK+ +++ + +L  EML  GI+PT+VTYN L +G     +VE   KL + M   ++  
Sbjct: 548 ALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHP 607

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             +TYN+ +   C    +    E+++ +     E     Y+ LI G CK   ++ A    
Sbjct: 608 NATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFH 667

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
             +   G      +Y+ +I       +  +A  LF DM  +G       +N
Sbjct: 668 NEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYN 718



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 46/291 (15%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           ++ LL  + Q G+ P+    + ++    L    D A ELF  +       NV +YN L+ 
Sbjct: 219 SAPLLRRVRQYGISPSPEACNAVLSRLPL----DEAIELFQGLPDK----NVCSYNILLK 270

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD--------- 114
             C    VE++  L+ EM S    P VVTY  L HG   + ++E+A+KL D         
Sbjct: 271 VLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEP 327

Query: 115 --------------------------EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                                     +M H  V  + + Y T + G C  G +V A   F
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             ++          Y+ LI+GLC+ G+L+ A ++ Q +    L  + VTY +++ G+C  
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKR 447

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G+M +A  +   M  +GVAPN VT+  L  G  +  +     ELLH M  +
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 97/202 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A R +  M   G++P+ + Y+TLID  C +GE+DRA +L   M  NG    +VTYN 
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C +  VE    L   ML K I P   TYN+L       + ++   +++  M   +
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    +TYN  I G CK   + EA      +      L   +YS LI  L K  K   A 
Sbjct: 640 VEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699

Query: 181 ELFQSLPRVGLMPNVVTYNIMI 202
           +LF  + + G       YN  I
Sbjct: 700 KLFHDMRKEGFTAEPDVYNFYI 721



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 35/133 (26%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M   + +   M  R V PN   Y+ LI G                               
Sbjct: 625 MKSTTEIYKGMCSRNVEPNENTYNILIKG------------------------------- 653

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
               +CK + ++E+   ++EM+ KG R T  +Y+ L   L +  +   A KLF +M+   
Sbjct: 654 ----HCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709

Query: 121 VAAETSTYNTFID 133
             AE   YN +ID
Sbjct: 710 FTAEPDVYNFYID 722


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 136/254 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  LL+ M+ +   PN   Y+ LI+GFC  G ++ A E+  SM   G   N V YN LI
Sbjct: 395 SALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLI 454

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK  ++EE+L L+ EM  KG +P + T+N+L +GL + H++E AL L+ +M    V 
Sbjct: 455 CALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVI 514

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T TYNT +        I +A +L   +    C L    Y+ LI  LCK G +E    L
Sbjct: 515 ANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGL 574

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   G+ P +++ NI+I G C  G+++ A     DM  +G+ P+ VT+N+L+ G  +
Sbjct: 575 FEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCK 634

Query: 243 NNETSKVVELLHRM 256
                +   L +++
Sbjct: 635 MGHVQEASNLFNKL 648



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 136/255 (53%), Gaps = 5/255 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA++LLD M+ RG   +A  Y  L+ G C  G++D AR L   +       N V YNTLI
Sbjct: 293 EAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLI 348

Query: 63  NGYCKTKDVEESLNL-YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +GY  +   EE+ +L Y+ M+  G  P   T+N +  GL +   +  AL+L +EM     
Sbjct: 349 SGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRF 408

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY   I+G CK G + EAAE+  ++      L    Y+CLI  LCK G +E A +
Sbjct: 409 EPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQ 468

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +   G  P++ T+N +I+G C + +M++A  L+ DM  +GV  N VT+NTL+   +
Sbjct: 469 LFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFL 528

Query: 242 RNNETSKVVELLHRM 256
             +   +  +L+  M
Sbjct: 529 MRDSIQQAFKLVDEM 543



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 137/288 (47%), Gaps = 32/288 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M + G  PN+ +Y TLI   C    +  A +L   M +  C  +V T+N 
Sbjct: 221 VDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFND 280

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C+   + E+  L   ML +G     +TY  L HGL  + QV+ A  L +++ + +
Sbjct: 281 VIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPN 340

Query: 121 VA--------------------------------AETSTYNTFIDGLCKNGYIVEAAELF 148
                                              +  T+N  IDGL K GY+V A EL 
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +   + E  +  Y+ LI+G CK G+LE A E+  S+   GL  N V YN +I   C D
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD 460

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G +++A  LF +M  KG  P+  TFN+L+ G  +N++  + + L H M
Sbjct: 461 GNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDM 508



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 128/281 (45%), Gaps = 32/281 (11%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RGV P  + +  ++   C+  E+D A  L   M  +GC+ N V Y TLI+  C+   
Sbjct: 196 MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNR 255

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L L  +M      P V T+N + HGL    ++  A KL D M     + +  TY  
Sbjct: 256 VSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315

Query: 131 FIDGLCKNGYIVEAAE--------------------------------LFRTLRVLKCEL 158
            + GLC+ G + EA                                  L+  + +   E 
Sbjct: 316 LMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               ++ +IDGL K G L +A EL   +      PNV+TY I+I+GFC  G++++A ++ 
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV 435

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             M AKG++ N V +N L+    ++    + ++L   M  +
Sbjct: 436 NSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGK 476



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 40/295 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL-FVSMDINGCMHNVVTYN 59
           +DEA  LL+    +   PN  +Y+TLI G+  +G  + A++L + +M I G   +  T+N
Sbjct: 326 VDEARALLN----KIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFN 381

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +I+G  K   +  +L L +EM++K   P V+TY  L +G  +  ++E A ++ + M   
Sbjct: 382 IMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK 441

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            ++  T  YN  I  LCK+G I EA +LF  +    C+  I  ++ LI+GLCK  K+E A
Sbjct: 442 GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEA 501

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGF---------------------------------- 205
             L+  +   G++ N VTYN ++H F                                  
Sbjct: 502 LSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKA 561

Query: 206 -CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            C  G ++K   LF +M  KG+ P  ++ N L+ G  R  + +  ++ L  M  R
Sbjct: 562 LCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHR 616



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 105/203 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  L   M   GV  N   Y+TL+  F +   I +A +L   M   GC  + +TYN 
Sbjct: 498 MEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNG 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   CKT  VE+ L L+ EML KGI PT+++ N L  GL    +V  ALK   +M H  
Sbjct: 558 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 617

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ I+GLCK G++ EA+ LF  L+          Y+ LI   C  G    A 
Sbjct: 618 LTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDAC 677

Query: 181 ELFQSLPRVGLMPNVVTYNIMIH 203
            L       G +PN VT++I+I+
Sbjct: 678 LLLYKGVDSGFIPNEVTWSILIN 700



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 5/250 (2%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLING 64
           +LL  M   G+     ++  ++  +   G   +A  L + M  +  C     +YN +++ 
Sbjct: 120 KLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDI 179

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
                    + N++ +MLS+G+ PTV T+  +   L  + +V+ A  L  +M        
Sbjct: 180 LVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPN 239

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           +  Y T I  LC+N  + EA +L   + ++ CE  ++ ++ +I GLC+ G++  A +L  
Sbjct: 240 SVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLD 299

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +   G   + +TY  ++HG C  GQ+D+A  L      K   PN V +NTL+ G + + 
Sbjct: 300 RMLLRGFSTDALTYGYLMHGLCRMGQVDEARALL----NKIPNPNTVLYNTLISGYVASG 355

Query: 245 ETSKVVELLH 254
              +  +LL+
Sbjct: 356 RFEEAKDLLY 365



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 1/236 (0%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS-K 84
           LID     G+     +L   M   G +     +  ++  Y K     ++  L  +M    
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
              PT  +YN +   L +      A  +F +M    V+    T+   +  LC    +  A
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             L R +    C      Y  LI  LC+  ++  A +L + +  +   P+V T+N +IHG
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            C  G++ +A  L   M  +G + + +T+  LM G  R  +  +   LL+++   N
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPN 340


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 136/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L   M +RG +P++  ++ L+D     G +D A EL   M   G    VVTYN LI
Sbjct: 202 KAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI 261

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+ K  D+ E+ NL  EM   G +P VVTY+ L  GL +  Q++ A ++  +M+     
Sbjct: 262 AGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCP 321

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TYNT I+GL K G + +A  LF  ++   C   +  YS LI  L K  ++E+A  L
Sbjct: 322 PDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVL 381

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +  VG+ P++ TY  +I      GQ+D A  LF +M  KG++P+ +T+N  +    R
Sbjct: 382 FEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGR 441

Query: 243 NNETSKVVELLHRMDE 258
                +  ++   M E
Sbjct: 442 GGRFKEARKIFEDMKE 457



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 136/257 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M +RG  P+ F Y++LI G    G   +A EL   M+ +GC  +V+TY++
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  K  +  ++  L+ EM  +G +P  +T+  L   L +  +V+ AL+L DEM+   
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  I G  K G +VEA  L   ++   C+  +  YSCLI GL K  +L+ A 
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + + + G  P+ +TYN +I+G    G ++ A  LF  M++KG  P+ VT++TL+   
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL 369

Query: 241 IRNNETSKVVELLHRMD 257
            +         L   M+
Sbjct: 370 GKAARVESACVLFEEME 386



 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 134/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LLD M +RGV+P    Y+ LI GF   G++  A  L   M  NGC  +VVTY+ 
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC 294

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  K   ++E+  +  +M  +G  P  +TYNTL +GL +   +  A +LFD M+   
Sbjct: 295 LITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY+T I  L K   +  A  LF  +  +  +  +  Y  +I  L K G+++ A 
Sbjct: 355 CNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDAD 414

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   GL P+V+TYN  ++     G+  +A  +F DM+  G+ P+  T++ L+LG 
Sbjct: 415 RLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGL 474

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  E      LL  + E+ 
Sbjct: 475 SKTKEVDDACGLLKELIEQG 494



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 127/243 (52%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   Y++L++     G+ + A+ LF  +       +VV+Y+ LIN   +    E +L +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            +EM +KG +P + TYNTL   L +  Q + AL+L  EM+ +    +  TYN  I  L K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G + EA  LF  +R   C      Y+ LI GL K+G+ + A EL + + R G  P+V+T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y+ +I G   DG+  KA  LF +M+ +G  P+ +TF  LM    +       +ELL  M 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 258 ERN 260
           ER 
Sbjct: 247 ERG 249



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 129/259 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA RLL  M   G  P+   Y+ LI      G +  A  LF  M   GC+ +  TYN+L
Sbjct: 96  DEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSL 155

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G  K    ++++ L  EM   G  P V+TY++L  GL +  +   A KLF EM+    
Sbjct: 156 IYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR 215

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             ++ T+   +D L K G + +A EL   ++    + G+  Y+ LI G  K+G L  A+ 
Sbjct: 216 KPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYN 275

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + R G  P+VVTY+ +I G     Q+D+A  +   ME +G  P+ +T+NTL+ G  
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335

Query: 242 RNNETSKVVELLHRMDERN 260
           +    +    L  RM  + 
Sbjct: 336 KAGLLNDAGRLFDRMKSKG 354



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 1/259 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  L + +      P+   YS LI+     G+ + A E+   M   GC  N+ TYNTL
Sbjct: 26  EEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTL 85

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   K    +E+L L +EM   G  P V TYN L   L +  ++  A  LF EM+    
Sbjct: 86  VDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGC 145

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +T TYN+ I GL K G   +A EL   +    C   +  YS LI GL K G+   A++
Sbjct: 146 VPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFK 205

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LFQ + R G  P+ +T+  ++      G++D A +L  +M+ +GV P  VT+N L+ G  
Sbjct: 206 LFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFG 265

Query: 242 RNNETSKVVELLHRMDERN 260
           +  +  +   LL  M +RN
Sbjct: 266 KVGDLVEAYNLLDEM-KRN 283



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 124/232 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LLD M + G +P+   YS LI G     ++D A ++   M+  GC  + +TYNTLI
Sbjct: 272 EAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLI 331

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG  K   + ++  L+  M SKG  P VVTY+TL   L +  +VE A  LF+EM+   + 
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ 391

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY + I  L K G + +A  LF  +R       +  Y+  ++ L + G+ + A ++
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           F+ +   GL+P+V TY+ ++ G     ++D A  L  ++  +G A + + F+
Sbjct: 452 FEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFD 503



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 138/295 (46%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++L  M + G  P+   Y+TLI+G    G ++ A  LF  M   GC  +VVTY+T
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST 364

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI    K   VE +  L+ EM S GI+P + TY ++   L +  QV+ A +LF EM+   
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG 424

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE--- 177
           ++ +  TYN F++ L + G   EA ++F  ++       +  Y  L+ GL K  +++   
Sbjct: 425 LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDAC 484

Query: 178 -------------------------TAW-------ELFQSLPRVGLMPNVVTYNIMIHGF 205
                                    T+W       EL Q     GL P   +YN +I   
Sbjct: 485 GLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDAL 544

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              G++ +A +   D++ +G  P+ V++++L+    +  +     ELL  M +R 
Sbjct: 545 AKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 35/272 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A RL D M  +G  P+   YSTLI        ++ A  LF  M+  G   ++ TY +
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I    K   V+++  L+SEM  KG+ P V+TYN   + L    + + A K+F++M+ S 
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL---------------------- 158
           +  + +TY+  + GL K   + +A  L + L    C                        
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAH 519

Query: 159 -------------GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                        G  +Y+ LID L K G++  A+   + L   G  P++V+Y+ +I   
Sbjct: 520 ELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISAL 579

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              GQ+D A +L  +M  +G+  +  +++ L+
Sbjct: 580 GQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL     +G+ P A  Y+ LID     G +  A      +   G   ++V+Y++
Sbjct: 515 VDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSS 574

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           LI+   +T  ++ +  L  EM  +G++ +  +Y+ L   L
Sbjct: 575 LISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 138/255 (54%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +  + MI  G+ P+ F Y+ +ID  C  G+++ +R LFV M   G   +VVTYN+LI+GY
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K   +EE  +L++EM   G  P ++TYN L +   +  ++  A + F EM+++ +    
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY+T ID  CK G +  A +L   +R          Y+ LID  CK G L  AW+L   
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + + G+  N+VTY  ++ G C  G+M +A ++F  M   G++PN   +  L+ G I+   
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455

Query: 246 TSKVVELLHRMDERN 260
               +++L +M E N
Sbjct: 456 MEDAMKILKQMTECN 470



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 139/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ + RL   M + G+ P+   Y++LIDG+   G ++    LF  M   GC+ +++TYN 
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YCK + +  +   +SEM + G++P VVTY+TL     +   ++ A+KL  +M+ + 
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + ID  CK G + EA +L   +     +L I  Y+ L+DGLCK G++  A 
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F+S+ + G+ PN   Y  ++HG+    +M+ A  +   M    + P+ + + +++ G 
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 485

Query: 241 IRNNETSKVVELLHRMDER 259
               +  +   +L  M  R
Sbjct: 486 CSQRKLEETKLILEEMKSR 504



 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 136/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL+ M+Q GV+ N   Y+ L+DG C  G +  A E+F SM  +G   N   Y  
Sbjct: 386 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 445

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY K + +E+++ +  +M    I+P ++ Y ++  G     ++E    + +EM+   
Sbjct: 446 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++A      T ID   K G   +A   F+ ++ +  E  I  Y  LIDGLC+ G +E A 
Sbjct: 506 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAV 565

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F  +  +GL PNV  Y  +I G C +  ++ A  LF +M+ +G+ P+   F  L+ G 
Sbjct: 566 DYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGN 625

Query: 241 IRNNETSKVVELLHRMDE 258
           +++    + + L+ RM E
Sbjct: 626 LKHGNLQEALVLISRMTE 643



 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 119/256 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+     M      P A   + L+     +G     R+ F  M   G   +V TYN 
Sbjct: 176 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNV 235

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK  D+E S  L+ +M   G+ P VVTYN+L  G  ++  +E    LF+EM+   
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 295

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  I+  CK   +  A E F  ++    +  +  YS LID  CK G ++ A 
Sbjct: 296 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 355

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   + R GL+PN  TY  +I   C  G + +A  L  DM   GV  N VT+  L+ G 
Sbjct: 356 KLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 415

Query: 241 IRNNETSKVVELLHRM 256
            +     +  E+   M
Sbjct: 416 CKAGRMIEAEEVFRSM 431



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 124/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A ++L  M +  ++P+  +Y ++I G C   +++  + +   M   G   N V   T
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ Y K     ++LN + EM   G+  T+VTY  L  GL E   VE A+  F  M    
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG 575

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    + Y + IDGLC N  I  A +LF  ++       I A++ LIDG  K G L+ A 
Sbjct: 576 LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 635

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +  + +  ++  Y  ++ GF   G++ +A   F +M  KG+ P  V    L+   
Sbjct: 636 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 695

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +  + +EL + M+ 
Sbjct: 696 YKRGQLDEAIELKNEMER 713



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 105/208 (50%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C+     ++ L + + +   +EE+   +S M +    P   + N L H L +    + 
Sbjct: 154 NICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQL 213

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
             K F++M  + +A    TYN  ID LCK G +  +  LF  +R +     +  Y+ LID
Sbjct: 214 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 273

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  K+G LE    LF  +  VG +P+++TYN +I+ +C   +M +A + F +M+  G+ P
Sbjct: 274 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 333

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N VT++TL+    +       ++LL  M
Sbjct: 334 NVVTYSTLIDAFCKEGMMQGAIKLLXDM 361



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%)

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA E F  +R  +      + + L+  L K G  +   + F  +   G+ P+V TY
Sbjct: 174 GLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 233

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N+MI   C +G ++ +  LF+ M   G++P+ VT+N+L+ G  +     +V  L + M +
Sbjct: 234 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 293


>gi|147742778|gb|ABQ50558.1| hypothetical protein [Brassica rapa]
          Length = 277

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 143/254 (56%), Gaps = 6/254 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M+ RG+ P+   Y++LI G C+   +D A ++   M   GC  ++VTY TLINGYC
Sbjct: 1   LYNEMVPRGIDPDTITYTSLIYGLCMENRLDEANQMMDLMVSKGCEPSIVTYGTLINGYC 60

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K K V + + L+ E+  +G+    VTY+TL  G  E  ++  A +LF EM    V+    
Sbjct: 61  KAKRVVDGMKLFREISLRGLVANTVTYSTLIQGFCEAGKLNVAKELFQEMVSRGVSPSVV 120

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID--GLCKIGKLETAWELFQ 184
           TY   +DGLC NG + EA E+   ++  KC++GI+     I   G+C   +++ AWELF 
Sbjct: 121 TYGILLDGLCDNGELEEALEILEKMQ--KCKMGIDIGIYNIIIHGMCNARRVDDAWELFS 178

Query: 185 S-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGCIR 242
           S LP  G+ P+V TYN+MI G C  G + +A  LF  M E    AP+  T+NTL+   + 
Sbjct: 179 SLLPLKGVKPDVKTYNVMIGGLCKKGSLSEADKLFKKMGEEDETAPSECTYNTLIRAHLG 238

Query: 243 NNETSKVVELLHRM 256
            +  +  VEL+  M
Sbjct: 239 GSGVATSVELIEEM 252



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 133/239 (55%), Gaps = 2/239 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA++++DLM+ +G  P+   Y TLI+G+C    +    +LF  + + G + N VTY+T
Sbjct: 30  LDEANQMMDLMVSKGCEPSIVTYGTLINGYCKAKRVVDGMKLFREISLRGLVANTVTYST 89

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   +  +  L+ EM+S+G+ P+VVTY  L  GL +  ++E AL++ ++MQ   
Sbjct: 90  LIQGFCEAGKLNVAKELFQEMVSRGVSPSVVTYGILLDGLCDNGELEEALEILEKMQKCK 149

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETA 179
           +  +   YN  I G+C    + +A ELF +L  LK  +  ++ Y+ +I GLCK G L  A
Sbjct: 150 MGIDIGIYNIIIHGMCNARRVDDAWELFSSLLPLKGVKPDVKTYNVMIGGLCKKGSLSEA 209

Query: 180 WELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +LF+ +       P+  TYN +I        +  + +L  +M+  G + +  T   ++
Sbjct: 210 DKLFKKMGEEDETAPSECTYNTLIRAHLGGSGVATSVELIEEMKRCGFSADASTMKMVI 268



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 119/220 (54%), Gaps = 1/220 (0%)

Query: 42  LFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
           L+  M   G   + +TY +LI G C    ++E+  +   M+SKG  P++VTY TL +G  
Sbjct: 1   LYNEMVPRGIDPDTITYTSLIYGLCMENRLDEANQMMDLMVSKGCEPSIVTYGTLINGYC 60

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           +  +V   +KLF E+    + A T TY+T I G C+ G +  A ELF+ +        + 
Sbjct: 61  KAKRVVDGMKLFREISLRGLVANTVTYSTLIQGFCEAGKLNVAKELFQEMVSRGVSPSVV 120

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            Y  L+DGLC  G+LE A E+ + + +  +  ++  YNI+IHG CN  ++D A +LF  +
Sbjct: 121 TYGILLDGLCDNGELEEALEILEKMQKCKMGIDIGIYNIIIHGMCNARRVDDAWELFSSL 180

Query: 222 -EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              KGV P+  T+N ++ G  +    S+  +L  +M E +
Sbjct: 181 LPLKGVKPDVKTYNVMIGGLCKKGSLSEADKLFKKMGEED 220



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 37/169 (21%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTG----------------------------- 34
           A  L   M+ RGV P+   Y  L+DG C  G                             
Sbjct: 103 AKELFQEMVSRGVSPSVVTYGILLDGLCDNGELEEALEILEKMQKCKMGIDIGIYNIIIH 162

Query: 35  ------EIDRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG-I 86
                  +D A ELF S+  + G   +V TYN +I G CK   + E+  L+ +M  +   
Sbjct: 163 GMCNARRVDDAWELFSSLLPLKGVKPDVKTYNVMIGGLCKKGSLSEADKLFKKMGEEDET 222

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            P+  TYNTL         V  +++L +EM+    +A+ ST    ID L
Sbjct: 223 APSECTYNTLIRAHLGGSGVATSVELIEEMKRCGFSADASTMKMVIDML 271


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 136/238 (57%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA  L+D M+QRG +P+   Y  +++G C  G+ D A  L   M+      NVV Y+T+
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK +  +++LNL++EM +KG+RP V+TY++L   L    +   A +L  +M    +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T++  ID   K G +V+A +L+  +     +  I  YS LI+G C + +L  A +
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + + + R   +PNVVTYN +I+GFC   ++DK  +LF +M  +G+  N VT+ TL+ G
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 108/180 (60%), Gaps = 4/180 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L + MI+R + PN F YS+LI+GFC+   +  A+++   M    C+ NVVTYNTLI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K V++ + L+ EM  +G+    VTY TL HG F+    ++A  +F +M    V 
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  +DGLCKNG + +A  +F  L+    E  I  Y+ +I+G+CK GK    W++
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK----WKM 516



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M++ G +P+   ++TLI G  L  +   A  L   M   GC  ++VTY  
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  D + +LNL ++M +  I   VV Y+T+   L +    + AL LF EM++  
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY++ I  LC  G   +A+ L   +   K    +  +S LID   K GKL  A 
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L++ + +  + PN+ TY+ +I+GFC   ++ +A  +   M  K   PN VT+NTL+ G 
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403

Query: 241 IRNNETSKVVELLHRMDER 259
            +     K +EL   M +R
Sbjct: 404 CKAKRVDKGMELFREMSQR 422



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 114/209 (54%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +ASRLL  MI+R + PN   +S LID F   G++ +A +L+  M       N+ TY++L
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING+C    + E+  +   M+ K   P VVTYNTL +G  +  +V+  ++LF EM    +
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T TY T I G  +      A  +F+ +  +     I  Y+ L+DGLCK GKL  A  
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +F+ L R  + P++ TYNIMI G C  G+
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 123/246 (50%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N + Y+ LI+ FC    +  A  L   M   G   ++VT N+L+NG+C    + ++
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L  +M+  G +P  VT+ TL HGLF  ++   A+ L D M       +  TY   ++G
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G    A  L   +   K E  +  YS +ID LCK    + A  LF  +   G+ PN
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V+TY+ +I   CN G+   A  L  DM  + + PN VTF+ L+   ++  +  K  +L  
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347

Query: 255 RMDERN 260
            M +R+
Sbjct: 348 EMIKRS 353



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 122/238 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   M  +GVRPN   YS+LI   C  G    A  L   M       N+VT++ L
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ + K   + ++  LY EM+ + I P + TY++L +G   + ++  A ++ + M   D 
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYNT I+G CK   + +  ELFR +           Y+ LI G  +    + A  
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +F+ +  VG+ PN++TYNI++ G C +G++ KA  +F  ++   + P+  T+N ++ G
Sbjct: 450 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 3/250 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G  P+    ++L++GFC    I  A  L   M   G   + VT+ TLI+G      
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             E++ L   M+ +G +P +VTY  + +GL +    + AL L ++M+ + + A    Y+T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID LCK  +  +A  LF  +        +  YS LI  LC  G+   A  L   +    
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI--RNNETS 247
           + PN+VT++ +I  F   G++ KA  L+ +M  + + PN  T+++L+ G C+  R  E  
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378

Query: 248 KVVELLHRMD 257
           +++EL+ R D
Sbjct: 379 QMLELMIRKD 388



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 87/139 (62%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA ++L+LMI++   PN   Y+TLI+GFC    +D+  ELF  M   G + N VTY T
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ + +D + +  ++ +M+S G+ P ++TYN L  GL +  ++  A+ +F+ +Q S 
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493

Query: 121 VAAETSTYNTFIDGLCKNG 139
           +  +  TYN  I+G+CK G
Sbjct: 494 MEPDIYTYNIMIEGMCKAG 512



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 90/188 (47%)

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           ++++++ L+  M      P+++ ++ L   + ++++ +  +   ++M+   ++    TYN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I+  C+   +  A  L   +  L  E  I   + L++G C   ++  A  L   +  +
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+ VT+  +IHG     +  +A  L   M  +G  P+ VT+  ++ G  +  +T   
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 250 VELLHRMD 257
           + LL++M+
Sbjct: 238 LNLLNKME 245


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 147/263 (55%), Gaps = 3/263 (1%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA +LL D++ ++  +P+   ++ +I GFC  G +  A E+  ++   GC+ N VTY 
Sbjct: 155 VDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKG--IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           TLI+G+CK+ ++ E+L L+  + S+     P VVT+N L  GL +  ++EHA +L  +M+
Sbjct: 215 TLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             D+ A+T TY T +DGLCK G   E + +F  +    C   +  Y+ L+   CK G L+
Sbjct: 275 ARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQ 334

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A ++ +S+   G+ P+V TY +++ G   +G++  A + F  +  +   P  V ++ L+
Sbjct: 335 DAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALV 394

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +     + V+    M +R 
Sbjct: 395 RGCCKAALVDEAVKYYVEMLDRR 417



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 2/237 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNT 60
           EA  +L+ ++  G  PNA  Y+TLIDGFC +G +  A +LF  +S   +    NVVT+N 
Sbjct: 193 EAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNA 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +E +  L  +M ++ +R    TY TL  GL +  +     ++F+EM    
Sbjct: 253 LISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T +   CK G + +A ++ R++        +  Y+ L++GL + GK+ TA 
Sbjct: 313 CNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTAT 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E F+ + R    P  V Y+ ++ G C    +D+A   +++M  + +AP+  T   L+
Sbjct: 373 EFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 136/266 (51%), Gaps = 13/266 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA    + M++R   PN    + L+   C  G +D+A  +F  +    C  +V+T N 
Sbjct: 19  LGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGIQ---CSPSVITLNI 75

Query: 61  LINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-- 117
           LING+C+ + ++++L L+ EM     + P   TY  +     ++ +++ A +L +E    
Sbjct: 76  LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCC 135

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKL 176
            SDV A TS       G CK   + EA +L   +   K  +  I A++ +I G CK G++
Sbjct: 136 SSDVIAITSVAR----GFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRV 191

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFN 234
             A+E+ ++L  +G +PN VTY  +I GFC  G + +A  LF  + ++     PN VTFN
Sbjct: 192 REAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFN 251

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+ G  + +      EL+ +M  R+
Sbjct: 252 ALISGLCKADRLEHAFELVKQMKARD 277



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 130/247 (52%), Gaps = 11/247 (4%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN F +S LI G C  G +  A E +  M    C+ N+   N L+   C+   +++++ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 78  YSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETSTYNTFIDG 134
           +     +GI+  P+V+T N L +G  E+  ++ AL+LF EM+ +  +  E +TY   I  
Sbjct: 61  F-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL-PRVGLMP 193
            CK   + +A +L        C   + A + +  G CK  +++ A++L   +  +    P
Sbjct: 116 YCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++V +N++IHGFC  G++ +A+++   + + G  PN VT+ TL+ G  ++   S+ ++L 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 254 HRMDERN 260
             +  R+
Sbjct: 234 KVLSSRD 240


>gi|147742769|gb|ABQ50550.1| hypothetical protein [Brassica rapa]
          Length = 281

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/250 (38%), Positives = 141/250 (56%), Gaps = 6/250 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG+ P+   Y++LI G C+   +D A ++   M   GC  ++VTY TLINGYCK K 
Sbjct: 1   MVPRGIDPDTITYTSLIYGLCMENRLDEANQMMDLMVSKGCEPSIVTYGTLINGYCKAKR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V + + L+ E+  +G+    VTY+TL  G  E  ++  A +LF EM    V+    TY  
Sbjct: 61  VVDGMKLFREISLRGLVANTVTYSTLIQGFCEAGKLNVAKELFQEMVSRGVSPSVVTYGI 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID--GLCKIGKLETAWELFQS-LP 187
            +DGLC NG + EA E+   ++  KC++GI+     I   G+C   +++ AWELF S LP
Sbjct: 121 LLDGLCDNGELEEALEILEKMQ--KCKMGIDIGIYNIIIHGMCNARRVDDAWELFSSLLP 178

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGCIRNNET 246
             G+ P+V TYN+MI G C  G + +A  LF  M E    AP+  T+NTL+   +  +  
Sbjct: 179 LKGVKPDVKTYNVMIGGLCKKGSLSEADKLFKKMGEEDETAPSECTYNTLIRAHLGGSGV 238

Query: 247 SKVVELLHRM 256
           +  VEL+  M
Sbjct: 239 ATSVELIEEM 248



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 133/239 (55%), Gaps = 2/239 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA++++DLM+ +G  P+   Y TLI+G+C    +    +LF  + + G + N VTY+T
Sbjct: 26  LDEANQMMDLMVSKGCEPSIVTYGTLINGYCKAKRVVDGMKLFREISLRGLVANTVTYST 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   +  +  L+ EM+S+G+ P+VVTY  L  GL +  ++E AL++ ++MQ   
Sbjct: 86  LIQGFCEAGKLNVAKELFQEMVSRGVSPSVVTYGILLDGLCDNGELEEALEILEKMQKCK 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETA 179
           +  +   YN  I G+C    + +A ELF +L  LK  +  ++ Y+ +I GLCK G L  A
Sbjct: 146 MGIDIGIYNIIIHGMCNARRVDDAWELFSSLLPLKGVKPDVKTYNVMIGGLCKKGSLSEA 205

Query: 180 WELFQSLPRVG-LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +LF+ +       P+  TYN +I        +  + +L  +M+  G + +  T   ++
Sbjct: 206 DKLFKKMGEEDETAPSECTYNTLIRAHLGGSGVATSVELIEEMKRCGFSADASTMKMVI 264



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 1/208 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           + +TY +LI G C    ++E+  +   M+SKG  P++VTY TL +G  +  +V   +KLF
Sbjct: 9   DTITYTSLIYGLCMENRLDEANQMMDLMVSKGCEPSIVTYGTLINGYCKAKRVVDGMKLF 68

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            E+    + A T TY+T I G C+ G +  A ELF+ +        +  Y  L+DGLC  
Sbjct: 69  REISLRGLVANTVTYSTLIQGFCEAGKLNVAKELFQEMVSRGVSPSVVTYGILLDGLCDN 128

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVT 232
           G+LE A E+ + + +  +  ++  YNI+IHG CN  ++D A +LF  +   KGV P+  T
Sbjct: 129 GELEEALEILEKMQKCKMGIDIGIYNIIIHGMCNARRVDDAWELFSSLLPLKGVKPDVKT 188

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDERN 260
           +N ++ G  +    S+  +L  +M E +
Sbjct: 189 YNVMIGGLCKKGSLSEADKLFKKMGEED 216



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 37/169 (21%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTG----------------------------- 34
           A  L   M+ RGV P+   Y  L+DG C  G                             
Sbjct: 99  AKELFQEMVSRGVSPSVVTYGILLDGLCDNGELEEALEILEKMQKCKMGIDIGIYNIIIH 158

Query: 35  ------EIDRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG-I 86
                  +D A ELF S+  + G   +V TYN +I G CK   + E+  L+ +M  +   
Sbjct: 159 GMCNARRVDDAWELFSSLLPLKGVKPDVKTYNVMIGGLCKKGSLSEADKLFKKMGEEDET 218

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            P+  TYNTL         V  +++L +EM+    +A+ ST    ID L
Sbjct: 219 APSECTYNTLIRAHLGGSGVATSVELIEEMKRCGFSADASTMKMVIDML 267


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 140/258 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   ++D+M+Q G RPN   +++L++G+CL G ++ A  L  +M   G   N   Y TL+
Sbjct: 547 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 606

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L ++ +ML KG++PT V Y+ + HGLF+  +   A K+F EM  S   
Sbjct: 607 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 666

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   + GLC+N    EA  L   L  +  +  I  ++ +I  + K+G+ + A EL
Sbjct: 667 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 726

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PN+ TY++MI     +   ++A +LF+ +E  G A +    N ++   + 
Sbjct: 727 FDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLN 786

Query: 243 NNETSKVVELLHRMDERN 260
             E +K    L  + E N
Sbjct: 787 KAEVAKASNYLSIIGENN 804



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 134/253 (52%), Gaps = 1/253 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + +LM+ +G+ PN  V++ LI+ +   G +D+A  +F  M   G + + VT+ T+I+  C
Sbjct: 410 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 469

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++++L+ ++ M+  G+ P+   Y  L  G     ++  A +L  EM + D+     
Sbjct: 470 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 529

Query: 127 TY-NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            Y ++ I+ LCK G + E  ++   +        +  ++ L++G C +G +E A+ L  +
Sbjct: 530 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 589

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +  +G+ PN   Y  ++ G+C +G++D A  +F DM  KGV P  V ++ ++ G  +   
Sbjct: 590 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 649

Query: 246 TSKVVELLHRMDE 258
           T+   ++ H M E
Sbjct: 650 TTAAKKMFHEMIE 662



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 5/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  ++  M+  G+ P+ F YS +IDG C +  +D+A  +   M   G   N +TYN+
Sbjct: 261 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 320

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY  +    ES+ ++ +M S G+ PTV   N+  H LF+  +   A  +FD M    
Sbjct: 321 LIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG 380

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKL 176
              +  +Y+T    +C   Y+     ++  +  L    GI      ++ LI+   + G +
Sbjct: 381 PKPDIISYSTNASWVCY-WYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMM 439

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A  +F+ +   G++P+ VT+  +I   C  G++D A   F  M   GV P+   +  L
Sbjct: 440 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCL 499

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + GC  + E  K  EL+  M
Sbjct: 500 IQGCCNHGELVKAKELISEM 519



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+++GV P   + +++I   C   E+D+A  +   M  +G   ++ TY+ 
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+K ++++  +  +M+  G RP  +TYN+L HG         ++++F +M    
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC--KIGKLET 178
           V       N+FI  L K+G   EA  +F ++ +   +  I +YS     +C   +  +  
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWV 405

Query: 179 AWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            W  +F  +   G+ PN   +NI+I+ +   G MDKA  +F DM+ KG+ P+ VTF T++
Sbjct: 406 MWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 465

Query: 238 LGCIRNNETSKVVELLHRMD 257
               R     ++ + LH+ +
Sbjct: 466 SSLCR---IGRLDDALHKFN 482



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 1/152 (0%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           PT+ TYN L      +H+ +  L +   +  + +  +  +Y + I G  K+G + +A  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +        I   + +I  LCK+ +++ A  + Q +   G+ P++ TY+++I G C 
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              MDKA  +   M   G  PN +T+N+L+ G
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 324



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA+ LL+ +    V+ +   ++ +I      G    A+ELF ++   G + N+ TY+ +
Sbjct: 686 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 745

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    K +  EE+ NL+  +   G        N +   L    +V  A      +  +++
Sbjct: 746 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 805

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELF 148
             E ST +       + G   E  +L 
Sbjct: 806 TLEASTISLLASLFSREGKYREHIKLL 832


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 139/246 (56%), Gaps = 6/246 (2%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +PNA  YS +IDG C  G  D ARELF  M   G + +V++Y +LI+G+C++   +++  
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L++EM+  G++P V T++ L   L +  +V  A +L + M        T TY T + GLC
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR------VG 190
            N  I EA +LF  ++ L C   +  Y  L+ GLC+ G ++TA EL + +          
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+V++Y+I+I G C  G+ D+A +LF +M+A GV PN +++ +L+ G  R+ +     
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719

Query: 251 ELLHRM 256
            L + M
Sbjct: 720 HLFNEM 725



 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 128/227 (56%), Gaps = 8/227 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L + M+  GV+P+   +S LID  C  G++  A EL   M   GC+ N VTY TL+
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH---- 118
            G C    + E+  L+ +M   G  P VVTY TL  GL +   ++ AL+L  +M      
Sbjct: 596 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 655

Query: 119 --SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
             ++   +  +Y+  IDGLCK+G   EA ELF+ ++ L     + +Y+ LI G C+ GKL
Sbjct: 656 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 715

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           E A  LF  +   G+  N VTY++MIHGFC +GQ+DKA  LF  MEA
Sbjct: 716 EDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEA 760



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 142/262 (54%), Gaps = 8/262 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   M   GV P+   Y++LI GFC +G+   A+ LF  M   G   +V T++ L
Sbjct: 500 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 559

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK   V E+  L   M+ +G  P  VTY TL  GL    ++  A +LF +MQ    
Sbjct: 560 IDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGC 619

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG------IEAYSCLIDGLCKIGK 175
             +  TY T + GLC+ G I  A EL + +     + G      + +YS +IDGLCK G+
Sbjct: 620 LPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGR 679

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + A ELF+ +  +G++PNV++Y  +IHGFC  G+++ A  LF +M  +GV  N VT++ 
Sbjct: 680 EDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSV 739

Query: 236 LMLGCIRNNETSKVVELLHRMD 257
           ++ G  +  +  K   L  +M+
Sbjct: 740 MIHGFCKEGQIDKA--LFQKME 759



 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 143/265 (53%), Gaps = 6/265 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   M  +G+ P+   Y+TLI GFCL+G+ ++A+ LF  M   G   +V T + L
Sbjct: 319 DEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVL 378

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK   V E+  L   ++ +G  P VVT  TL  GL   H++  A +LF +MQ    
Sbjct: 379 IDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGC 438

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRV------LKCELGIEAYSCLIDGLCKIGK 175
                T  T + GLC++G I  A EL + +        + C+    +YS +IDGLCK G+
Sbjct: 439 MPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR 498

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + A ELF+ +  +G++P+V++Y  +IHGFC  G+   A  LF +M   GV P+  TF+ 
Sbjct: 499 EDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSV 558

Query: 236 LMLGCIRNNETSKVVELLHRMDERN 260
           L+    +  +  +  ELL  M +R 
Sbjct: 559 LIDMLCKEGKVIEANELLEVMIQRG 583



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 144/260 (55%), Gaps = 6/260 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ LL++M+QRG   +   YSTLI G C+   I  A +LF+SM   GC  + + Y TL+
Sbjct: 28  EANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 87

Query: 63  NGYCKTKDVEESLNLYSEMLSK----GI--RPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            G C+T  +  +L+L+ EML+     GI  +PT+V+Y+ +  GL +  + + A +LF EM
Sbjct: 88  KGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEM 147

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +   +  +  +Y + I G C++G   +A  LF  +  +     +   S LID LCK GK+
Sbjct: 148 KAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKV 207

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A EL + + + G + ++VTY+ +I G C   ++ +A  LF+ M+  G  P+ + + TL
Sbjct: 208 IEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTL 267

Query: 237 MLGCIRNNETSKVVELLHRM 256
           M G  +    +  ++L   M
Sbjct: 268 MKGLCQTGNINTALQLHQEM 287



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 134/242 (55%), Gaps = 6/242 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   M  +G+ P+   Y++LI GFC +G+ ++A+ LF  M   G   +V T + L
Sbjct: 138 DEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSML 197

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK   V E+  L   M+ +G    +VTY+TL  GL   H++  A +LF  MQ    
Sbjct: 198 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGC 257

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIGK 175
             +   Y T + GLC+ G I  A +L + +        +KC+  + +YS +IDGLCK  +
Sbjct: 258 RPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 317

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + A ELF+ +   G+MP+V++Y  +IHGFC  G+ +KA  LF +M   G+ P+  T + 
Sbjct: 318 EDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 377

Query: 236 LM 237
           L+
Sbjct: 378 LI 379



 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 151/303 (49%), Gaps = 47/303 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DIN----GCMHN 54
           + EA++L   M + G RP+A  Y TL+ G C TG+I+ A  L   M  D +     C   
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           +V+Y+ +I+G CK +  +E+  L+ EM ++G+ P V++Y +L HG     + E A  LF+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM    + ++ +T +  ID LCK G ++EA EL   +    C L I  YS LI GLC   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 175 KLETAWELFQSLPRVGLMPN---------------------------------------- 194
           ++  A  LF S+ ++G  P+                                        
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 195 -VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            +++Y+I+I G C D + D+A +LF +M+A+G+ P+ +++ TL+ G   + +  K   L 
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 254 HRM 256
           + M
Sbjct: 361 NEM 363



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 147/303 (48%), Gaps = 47/303 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DIN----GCMHN 54
           + EA+RL   M + G RP+A  Y TL+ G C TG I+ A +L   M  D       C   
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           +++Y+ +I+G CK +  +E+  L+ EM ++GI P V++Y TL HG     + E A  LF+
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM    +  + +T +  ID LCK G ++EA +L   +    C   +   + L+ GLC   
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421

Query: 175 KLETAWELFQSLPRVGLMPNVVT------------------------------------- 197
           ++  A +LF  + ++G MPNVVT                                     
Sbjct: 422 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 481

Query: 198 ----YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
               Y+I+I G C  G+ D+A +LF +M+A GV P+ +++ +L+ G  R+ +      L 
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 541

Query: 254 HRM 256
           + M
Sbjct: 542 NEM 544



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 132/263 (50%), Gaps = 6/263 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L + M+  G+R +    S LID  C  G++  A EL   M   GC+ ++VTY+TL
Sbjct: 173 EKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 232

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-- 119
           I G C    + E+  L+  M   G RP  + Y TL  GL +   +  AL+L  EM +   
Sbjct: 233 IKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTG 292

Query: 120 ----DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
                      +Y+  IDGLCK+    EA ELF+ ++       + +Y+ LI G C  GK
Sbjct: 293 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGK 352

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            E A  LF  +  VG+ P+V T +++I   C  G++ +A+ L   +  +G  P+ VT  T
Sbjct: 353 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTT 412

Query: 236 LMLGCIRNNETSKVVELLHRMDE 258
           L+ G    +  SK  +L  +M +
Sbjct: 413 LVKGLCMKHRISKATQLFLKMQK 435



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 131/254 (51%), Gaps = 6/254 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G++P+      LID FC  G++  A EL   M   GC+ ++VTY+TLI G C    
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-----QHSDVAAET 125
           + E+  L+  M   G RP  + Y TL  GL +  ++  AL L  EM     Q+      T
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 126 -STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             +Y+  IDGLCK+    EA ELF+ ++       + +Y+ LI G C+ GK E A  LF 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +  VG+  +V T +++I   C +G++ +A++L   M  +G   + VT++TL+ G    +
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 245 ETSKVVELLHRMDE 258
             S+   L   M +
Sbjct: 241 RISEATRLFMSMQK 254



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 6/217 (2%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   +V T   LI+ +CK   V E+  L   M+ +G    +VTY+TL  GL   H++  A
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAY 163
            +LF  M+      +   Y T + GLC+ G I  A  L + +        +KC+  + +Y
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           S +IDGLCK  + + A ELF+ +   G+MP+V++Y  +IHGFC  G+ +KA  LF +M  
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G+  +  T + L+    +  +  +  ELL  M +R 
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221



 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN 49
           +++A  L + M+ +GV+ NA  YS +I GFC  G+ID+A  LF  M+ N
Sbjct: 715 LEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 761


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 140/258 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   ++D+M+Q G RPN   +++L++G+CL G ++ A  L  +M   G   N   Y TL+
Sbjct: 470 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 529

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L ++ +ML KG++PT V Y+ + HGLF+  +   A K+F EM  S   
Sbjct: 530 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 589

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   + GLC+N    EA  L   L  +  +  I  ++ +I  + K+G+ + A EL
Sbjct: 590 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 649

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PN+ TY++MI     +   ++A +LF+ +E  G A +    N ++   + 
Sbjct: 650 FDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLN 709

Query: 243 NNETSKVVELLHRMDERN 260
             E +K    L  + E N
Sbjct: 710 KAEVAKASNYLSIIGENN 727



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 134/253 (52%), Gaps = 1/253 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + +LM+ +G+ PN  V++ LI+ +   G +D+A  +F  M   G + + VT+ T+I+  C
Sbjct: 333 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 392

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++++L+ ++ M+  G+ P+   Y  L  G     ++  A +L  EM + D+     
Sbjct: 393 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 452

Query: 127 TY-NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            Y ++ I+ LCK G + E  ++   +        +  ++ L++G C +G +E A+ L  +
Sbjct: 453 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 512

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +  +G+ PN   Y  ++ G+C +G++D A  +F DM  KGV P  V ++ ++ G  +   
Sbjct: 513 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 572

Query: 246 TSKVVELLHRMDE 258
           T+   ++ H M E
Sbjct: 573 TTAAKKMFHEMIE 585



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  ++  M+  G+ P+ F YS +IDG C +  +D+A  +   M   G   N +TYN+
Sbjct: 185 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 244

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY  +    ES+ ++ +M S G+ PTV   N+  H LF+  +   A  +FD M    
Sbjct: 245 LIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG 304

Query: 121 VAAETSTYNTFIDGL--CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
              +  +Y+T + G     +  + +   +F  +           ++ LI+   + G ++ 
Sbjct: 305 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 364

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +F+ +   G++P+ VT+  +I   C  G++D A   F  M   GV P+   +  L+ 
Sbjct: 365 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 424

Query: 239 GCIRNNETSKVVELLHRM 256
           GC  + E  K  EL+  M
Sbjct: 425 GCCNHGELVKAKELISEM 442



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 5/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+++GV P   + +++I   C   E+D+A  +   M  +G   ++ TY+ 
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+K ++++  +  +M+  G RP  +TYN+L HG         ++++F +M    
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 269

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK--LET 178
           V       N+FI  L K+G   EA  +F ++ +   +  I +YS ++ G        L  
Sbjct: 270 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 329

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              +F  +   G+ PN   +NI+I+ +   G MDKA  +F DM+ KG+ P+ VTF T++ 
Sbjct: 330 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 389

Query: 239 GCIRNNETSKVVELLHRMD 257
              R     ++ + LH+ +
Sbjct: 390 SLCR---IGRLDDALHKFN 405



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 129/251 (51%), Gaps = 3/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+ P+ F YS LI GF   GE+D+A  LF+ M   G +  ++  N++I   CK K+
Sbjct: 126 LLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE 184

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++ ++  +M+  GI P + TY+ +  GL +   ++ A ++ ++M  +     + TYN+
Sbjct: 185 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 244

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G   +G   E+  +F+ +        ++  +  I  L K G+   A  +F S+   G
Sbjct: 245 LIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG 304

Query: 191 LMPNVVTYNIMIHGF--CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             P++++Y+ M+HG+    D  +   H++F  M  KG+APN   FN L+    R     K
Sbjct: 305 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 364

Query: 249 VVELLHRMDER 259
            + +   M  +
Sbjct: 365 AMLIFEDMQNK 375



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 1/152 (0%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           PT+ TYN L      +H+ +  L +   +  + +  +  +Y + I G  K+G + +A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +        I   + +I  LCK+ +++ A  + Q +   G+ P++ TY+++I G C 
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              MDKA  +   M   G  PN +T+N+L+ G
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 248



 Score = 43.5 bits (101), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 59/140 (42%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA+ LL+ +    V+ +   ++ +I      G    A+ELF ++   G + N+ TY+ +
Sbjct: 609 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 668

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    K +  EE+ NL+  +   G        N +   L    +V  A      +  +++
Sbjct: 669 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 728

Query: 122 AAETSTYNTFIDGLCKNGYI 141
             E ST +       + G I
Sbjct: 729 TLEASTISLLASLFSREGMI 748


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 142/276 (51%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M   GV P+ + Y+ LID FC  G I++AR  F  M+  GC  +VVTY  
Sbjct: 471 VEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTA 530

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           L++ Y KTK V ++ +++  M+  G  P  +TY+ L  GL +  + + A +++ +M    
Sbjct: 531 LLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTS 590

Query: 117 -----------QHSD-VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
                      +H+D +A    TY   IDGLCK   +V+A EL   +    CE     Y 
Sbjct: 591 DNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYD 650

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK+GKL+ A E+F  + + G +P V TY  +I     D ++D A  +   M   
Sbjct: 651 ALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES 710

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              PN VT+  ++ G  R  E  K ++LL  M++R 
Sbjct: 711 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRG 746



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 137/275 (49%), Gaps = 16/275 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +++ LM+++G  P+   YS +I   C   ++++A  LF  M   G + +V TY  L
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   +E++ + + EM S G  P+VVTY  L H   +  QV  A  +F  M  +  
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG----------------IEAYSC 165
           A  T TY+  +DGLCK G   +A E++  +      +G                +  Y  
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGA 616

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LIDGLCK  K+  A EL   +   G  PN + Y+ +I GFC  G++D A ++F  M   G
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             P   T+ +L+    ++      +++L +M E +
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESS 711



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 111/207 (53%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           + PN   Y  LIDG C   ++  A+EL   M  NGC  N + Y+ LI+G+CK   ++ + 
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            ++  M   G  PTV TY +L   +F+  +++ A+K+  +M  S       TY   IDGL
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGL 726

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C+ G   +A +L   +    C   +  Y+ LIDGL K GK++ + +LF  +   G  PN 
Sbjct: 727 CRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNY 786

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDME 222
           VTY ++I+  C  G +D+AH L  +M+
Sbjct: 787 VTYRVLINHCCAAGLLDEAHSLLSEMK 813



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           + +AS +   M+  G  PN   YS L+DG C  GE  +A E++  M              
Sbjct: 541 VPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFE 600

Query: 47  --DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
               +    NVVTY  LI+G CK   V ++  L   M S G  P  + Y+ L  G  ++ 
Sbjct: 601 GEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVG 660

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           ++++A ++F  M          TY + ID + K+  +  A ++   +    C   +  Y+
Sbjct: 661 KLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYT 720

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +IDGLC+IG+ + A +L   + + G  PNVVTY  +I G    G++D +  LF  M  +
Sbjct: 721 AMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQ 780

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G APN VT+  L+  C       +   LL  M +
Sbjct: 781 GCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQ 814



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 138/325 (42%), Gaps = 71/325 (21%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING------------ 50
           +A  LLD+M   G  PN  +Y  LIDGFC  G++D A+E+F  M   G            
Sbjct: 629 DAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLI 688

Query: 51  -----------------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                                  C  NVVTY  +I+G C+  + +++L L S M  +G  
Sbjct: 689 DAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCN 748

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P VVTY +L  GL +  +V+ +L+LF +M     A    TY   I+  C  G + EA  L
Sbjct: 749 PNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSL 808

Query: 148 FRTLRV--------------------LKCELGI-------------EAYSCLIDGLCKIG 174
              ++                         LG+               Y  LID   K G
Sbjct: 809 LSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAG 868

Query: 175 KLETAWELFQSLPRVGLMPNVV---TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           +LE A EL + +  V    N+    TY  +I   C   Q++KA +L+ ++  KGV P   
Sbjct: 869 RLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELS 928

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
            F  L+ G I+ N+ ++ ++L + M
Sbjct: 929 AFICLIKGLIKVNKWNEALQLCYSM 953



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 6/261 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA   L  M      PN   Y TL+ GF    ++   + +   M   GC  N   +N+L
Sbjct: 291 DEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSL 350

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH------ALKLFDE 115
           ++ YC  +D   +  L + M   G  P  V YN     +    ++        A K+++E
Sbjct: 351 VHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEE 410

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M  S           F   LC  G   +A ++ + +           YS +I  LC+  K
Sbjct: 411 MLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMK 470

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +E A+ LFQ +  VG++P+V TY I+I  FC  G +++A   F +ME+ G +P+ VT+  
Sbjct: 471 VEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTA 530

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+   ++  +  +  ++ HRM
Sbjct: 531 LLHAYLKTKQVPQASDIFHRM 551



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 36/262 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++L  M++    PN   Y+ +IDG C  GE  +A +L   M+  GC  NVVTY +
Sbjct: 697 LDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTS 756

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH-----GLF-EIHQVEHALK--- 111
           LI+G  K+  V+ SL L+++M+++G  P  VTY  L +     GL  E H +   +K   
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 816

Query: 112 ------------------------LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                                   L +E++   + +    Y   ID   K G + +A EL
Sbjct: 817 WPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALEL 876

Query: 148 FRTLRVLKCELGI---EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            + +  +   L I   + Y+ LI  LC   +LE A+EL+  + R G++P +  +  +I G
Sbjct: 877 HKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKG 936

Query: 205 FCNDGQMDKAHDLFLDMEAKGV 226
                + ++A  L   M  +GV
Sbjct: 937 LIKVNKWNEALQLCYSMCDEGV 958



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 22/276 (7%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR------ARELFVSMDINGCMHNVVT 57
           A +LL+ M   G  P   VY+  I   C   E+        A +++  M  + C+ N V 
Sbjct: 363 AYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVN 422

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
                   C     +++  +   M+ KG  P   TY+ +   L E  +VE A  LF EM+
Sbjct: 423 TANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMK 482

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  +  TY   ID  CK G I +A   F  +  + C   +  Y+ L+    K  ++ 
Sbjct: 483 SVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVP 542

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM---------------- 221
            A ++F  +   G  PN +TY+ ++ G C  G+  KA +++  M                
Sbjct: 543 QASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGE 602

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
               +APN VT+  L+ G  + ++     ELL  M 
Sbjct: 603 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMS 638



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 7/200 (3%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N ++   C+     ++L     +   G RP+  TYN L   L    Q++   ++  EM  
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKL 176
                +  T   F   LCK G   +A      + + + +  ++   C  +I GL +    
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDA-----LVMIEREDFKLDTVLCTQMISGLMEASLF 290

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A      +     +PNVVTY  ++ GF    Q+     +   M  +G  PN   FN+L
Sbjct: 291 DEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSL 350

Query: 237 MLGCIRNNETSKVVELLHRM 256
           +       +     +LL+RM
Sbjct: 351 VHSYCNARDYPYAYKLLNRM 370



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 5/131 (3%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV---TYNTLIN 63
           LL+ +   G+   A VY  LID F   G +++A EL   M       N+    TY +LI 
Sbjct: 841 LLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQ 900

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    +E++  LYSE+  KG+ P +  +  L  GL ++++   AL+L   M   D   
Sbjct: 901 ALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSM--CDEGV 958

Query: 124 ETSTYNTFIDG 134
              + N+F  G
Sbjct: 959 NWQSNNSFDGG 969


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 147/267 (55%), Gaps = 11/267 (4%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M++R + P    YS++IDGFC    ++ A+ +F  M   GC  +++T NTLI+
Sbjct: 169 AEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLID 228

Query: 64  GYCKTK-----------DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           G C+ K           +V  + +L+ EM+S G+ P +VT NTL  GL E  ++E AL++
Sbjct: 229 GCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEM 288

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           F   Q S +  +T+T N  I+G+CK   + EA +LF +L V   E  +  Y+ LI    K
Sbjct: 289 FKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVK 348

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            G    A +++  +   G++P+ VTYN M+ GFC   ++++A  +   M ++G +P+ VT
Sbjct: 349 EGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVT 408

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           F+TL+ G  +       +EL   M +R
Sbjct: 409 FSTLIKGYCKAGRVDDGLELFSEMCQR 435



 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 134/255 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   MI  GV P+    +TL+ G C  G++++A E+F     +    +  T N +IN
Sbjct: 250 AQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIIN 309

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   V+E+ +L++ +   G+   VVTYN L     +      A  ++ EM    +  
Sbjct: 310 GMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIP 369

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            T TYN+ +DG CK   + EA ++  ++    C   +  +S LI G CK G+++   ELF
Sbjct: 370 STVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELF 429

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + GL+ + +TYN +IHGFC  G ++ A D+F +M + GV P+ +TF +++ G    
Sbjct: 430 SEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTK 489

Query: 244 NETSKVVELLHRMDE 258
            E  K + +L  + +
Sbjct: 490 AELQKGLTMLEDLQK 504



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 147/300 (49%), Gaps = 46/300 (15%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +   M ++G+ PN   Y+ +IDG+C  G+   A +L   M       +VVT++ LI
Sbjct: 98  KAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALI 157

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N + K   V  +  LY EML + I PT +TY+++  G  +  ++E A  +FD M     +
Sbjct: 158 NAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCS 217

Query: 123 AETSTYNTFID----------------------------------------------GLC 136
            +  T NT ID                                              GLC
Sbjct: 218 PDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLC 277

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           +NG + +A E+F+  +  K +L     + +I+G+CK  K++ AW+LF SLP  G+  +VV
Sbjct: 278 ENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVV 337

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TYNI+I  F  +G   +A D++L+M  KG+ P+ VT+N+++ G  + N   +  +++  M
Sbjct: 338 TYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSM 397



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 136/262 (51%), Gaps = 11/262 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+D M++ G +P+A  Y T+++G C  G+   A  +   MD +    NVV Y+ ++
Sbjct: 28  QALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIV 87

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK  +  ++ N+++EM  KGI P V+TYN +  G     +   A +L  +M   ++ 
Sbjct: 88  DRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNID 147

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T++  I+   K G +  A EL+R +           YS +IDG CK  +LE A  +
Sbjct: 148 PDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHM 207

Query: 183 FQSLPRVGLMPNVVTYNI-----------MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           F  +   G  P+++T N            +IHGFC  G ++ A DLF +M + GV+P+ V
Sbjct: 208 FDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIV 267

Query: 232 TFNTLMLGCIRNNETSKVVELL 253
           T NTL+ G   N +  K +E+ 
Sbjct: 268 TCNTLLAGLCENGKLEKALEMF 289



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 118/232 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G   N   ++TL++G C  G + +A  L   M   G   + VTY T++NG CK  D
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
              +LN+  +M    I+  VV Y+ +   L +      A  +F EM    +     TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG C  G   +A +L R +     +  +  +S LI+   K GK+  A EL++ + R  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           + P  +TY+ MI GFC   +++ A  +F  M +KG +P+ +T NTL+ GC R
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCR 232



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 135/264 (51%), Gaps = 11/264 (4%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M +  ++ N  +YS ++D  C  G   +A+ +F  M   G   NV+TYN +I+
Sbjct: 64  ALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMID 123

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC      ++  L  +M+ + I P VVT++ L +   +  +V  A +L+ EM   ++  
Sbjct: 124 GYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFP 183

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID-----------GLCK 172
            T TY++ IDG CK+  + +A  +F  +    C   I   + LID           G C+
Sbjct: 184 TTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQ 243

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +G +  A +LFQ +   G+ P++VT N ++ G C +G+++KA ++F   +   +  +  T
Sbjct: 244 VGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTAT 303

Query: 233 FNTLMLGCIRNNETSKVVELLHRM 256
            N ++ G  + N+  +  +L + +
Sbjct: 304 CNIIINGMCKGNKVDEAWDLFNSL 327



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 91/180 (50%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M+  G    VVT+ TL +GL    +V  AL L D M       +  TY T ++G+CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
            V A  + R +   + +  +  YS ++D LCK G    A  +F  +   G+ PNV+TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           MI G+C+ G+   A  L  DM  + + P+ VTF+ L+   ++  + S   EL   M  RN
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 35/222 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + +   GV  +   Y+ LI  F   G   RA ++++ M   G + + VTYN+
Sbjct: 317 VDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNS 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G+CK   +EE+  +   M+S+G  P VVT++TL  G  +  +V+  L+LF EM    
Sbjct: 377 MVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+T TYN  I G C                                   K+G L  A 
Sbjct: 437 LVADTITYNALIHGFC-----------------------------------KVGDLNGAQ 461

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           ++F+ +   G+ P+ +T+  M+ G C   ++ K   +  D++
Sbjct: 462 DIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 72/119 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +++D M+  G  P+   +STLI G+C  G +D   ELF  M   G + + +TYN 
Sbjct: 387 LEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNA 446

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G+CK  D+  + +++ EM+S G+ P  +T+ ++  GL    +++  L + +++Q S
Sbjct: 447 LIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 137/254 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   L+D MI+RG+  + +V++ LIDG C  G +  ARE+F  M   G   N+VT   L+
Sbjct: 238 EGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALM 297

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYC   +V+ +  L+  +   G +  V TYN   HG  ++ +V  A+++FDEM    V 
Sbjct: 298 GGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVV 357

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ ID LCK G +  A E+ +T+        I     L+DGLCK  +L+ A  L
Sbjct: 358 PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILL 417

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  L   GL P+V +Y I+IHG C   +M +A +L  DM  K + P+ VT++ L+ G  R
Sbjct: 418 FNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCR 477

Query: 243 NNETSKVVELLHRM 256
           +   S    LL+ M
Sbjct: 478 SGRISNAWRLLNEM 491



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + D M+ RG  PN    + L+ G+CL G +D ARELF ++   G   +V TYN  I
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFI 332

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT--------------------------- 95
           +GYCK   V +++ ++ EM  +G+ P +VTYN+                           
Sbjct: 333 HGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT 392

Query: 96  --------LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                   L  GL +  +++ A+ LF+++  S +  +  +Y   I G C +  + EA  L
Sbjct: 393 PDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNL 452

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
            R + +      I  YSCLIDGLC+ G++  AW L   +   G +P+ +TY+I++     
Sbjct: 453 LRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWK 512

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              +D+A  LF  M  +G+ P+ + +  ++ G  ++    + + L   M  +N
Sbjct: 513 KQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKN 565



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 130/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE     + M+  GV PN F Y +LI G C  G+      L   M   G   +V  +  
Sbjct: 201 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   + E+  ++ EM+++G  P +VT   L  G      V+ A +LFD +    
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN FI G CK G + +A  +F  +        I  Y+ LID LCK G++  AW
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ +++ R GL P++VT  I++ G C   ++D+A  LF  +   G+ P+  ++  L+ GC
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 241 IRNNETSKVVELLHRMDERN 260
             +    + + LL  M  +N
Sbjct: 441 CTSRRMGEAMNLLRDMHLKN 460



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 46/291 (15%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++RG   +    +T++ G C+ G + +A E    +  NG   N V+Y  LING C+   
Sbjct: 98  ILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGR 157

Query: 71  VEESLNL-------------------------------------------YSEMLSKGIR 87
           V E++NL                                           Y+EM+  G+ 
Sbjct: 158 VNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVC 217

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P   TY +L  GL  + +      L DEM    +      +   IDGLCKNG +VEA E+
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +     E  I   + L+ G C  G ++ A ELF ++   G   +V TYN+ IHG+C 
Sbjct: 278 FDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCK 337

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS---KVVELLHR 255
            G++  A  +F +M  +GV PN VT+N+L+    +  E S   ++V+ +HR
Sbjct: 338 VGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHR 388



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 116/243 (47%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+ N  +YS +ID  C  G +D   E +  M  NG   N  TY +LI G C      E  
Sbjct: 181 VKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGF 240

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EM+ +G+  +V  +  L  GL +   +  A ++FDEM +        T    + G 
Sbjct: 241 GLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGY 300

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C  G +  A ELF  +     +  +  Y+  I G CK+G++  A  +F  + R G++PN+
Sbjct: 301 CLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNI 360

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTYN +I   C  G++  A ++   M   G+ P+ VT   L+ G  ++    + + L ++
Sbjct: 361 VTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQ 420

Query: 256 MDE 258
           + E
Sbjct: 421 LVE 423



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 35/243 (14%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R+ D M + GV PN   Y++LID  C  GE+  A E+  +M  +G   ++VT   L+
Sbjct: 343 DAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILL 402

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK+K +++++ L+++++  G+ P V +Y  L HG     ++  A+ L  +M   ++ 
Sbjct: 403 DGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLV 462

Query: 123 AETSTYNTFIDGLCKNGYIV-----------------------------------EAAEL 147
               TY+  IDGLC++G I                                    EA  L
Sbjct: 463 PHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFL 522

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +     E  +  Y+ +IDG CK  +++ A  LF+ +    L+P++VTY I+ +    
Sbjct: 523 FNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFK 582

Query: 208 DGQ 210
            G 
Sbjct: 583 SGS 585



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 3/212 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + +++ G+ P+ + Y+ LI G C +  +  A  L   M +   + ++VTY+ 
Sbjct: 411 LDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSC 470

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C++  +  +  L +EM  KG  P  +TY+ L   L++   ++ A+ LF++M    
Sbjct: 471 LIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRG 530

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG CK+  I EA  LFR + +      I  Y+ L + + K G     W
Sbjct: 531 LEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEW 590

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           +    +  +   P V+ Y   +   C    +D
Sbjct: 591 KFVNVIRDINPPPRVLKY---LAALCKSEHLD 619



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 9/220 (4%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           G +  +  +F  +   G   + V  NT++ G C    V ++L  + E+++ G     V+Y
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSD--------VAAETSTYNTFIDGLCKNGYIVEAA 145
             L +GL E  +V  A+ L   ++           V      Y+  ID LC+NG++ E  
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           E +  +           Y  LI GLC +GK    + L   + R GL  +V  + ++I G 
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN 244
           C +G + +A ++F +M  +G  PN VT   LM G C++ N
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V  S +++ ++L +G     V  NT+  GL     V  AL+  DE+ ++  +    +Y  
Sbjct: 88  VSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGI 147

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLK--------CELGIEAYSCLIDGLCKIGKLETAWEL 182
            I+GLC+NG + EA  L R +   K         +  +  YS +ID LC+ G ++  +E 
Sbjct: 148 LINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEF 207

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +   G+ PN  TY  +I G C  G+  +   L  +M  +G+  +   F  L+ G  +
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267

Query: 243 NNETSKVVELLHRMDER 259
           N    +  E+   M  R
Sbjct: 268 NGMLVEAREMFDEMVNR 284


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 147/263 (55%), Gaps = 3/263 (1%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA +LL D++ ++  +P+   ++ +I GFC  G +  A E+  ++   GC+ N VTY 
Sbjct: 155 VDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKG--IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           TLI+G+CK+ ++ E+L L+  + S+     P VVT+N L  GL +  ++EHA +L  +M+
Sbjct: 215 TLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
             D+ A+T TY T +DGLCK G   E + +F  +    C   +  Y+ L+   CK G L+
Sbjct: 275 ARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQ 334

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A ++ +S+   G+ P+V TY +++ G   +G++  A + F  +  +   P  V ++ L+
Sbjct: 335 DAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALV 394

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +     + V+    M +R 
Sbjct: 395 RGCCKAALVDEAVKYYVEMLDRR 417



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 2/237 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNT 60
           EA  +L+ ++  G  PNA  Y+TLIDGFC +G +  A +LF  +S   +    NVVT+N 
Sbjct: 193 EAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNA 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +E +  L  +M ++ +R    TY TL  GL +  +     ++F+EM    
Sbjct: 253 LISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T +   CK G + +A ++ R++        +  Y+ L++GL + GK+ TA 
Sbjct: 313 CNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTAT 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E F+ + R    P  V Y+ ++ G C    +D+A   +++M  + +AP+  T   L+
Sbjct: 373 EFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 137/266 (51%), Gaps = 13/266 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA    + M++R   PN    + L+   C  G++D+A  +F  +    C  +V+T N 
Sbjct: 19  LGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGIQ---CSPSVITLNI 75

Query: 61  LINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-- 117
           LING+C+ + ++++L L+ EM     + P   TY  +     ++ +++ A +L +E    
Sbjct: 76  LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCC 135

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKL 176
            SDV A TS       G CK   + EA +L   +   K  +  I A++ +I G CK G++
Sbjct: 136 SSDVIAITSVAR----GFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRV 191

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFN 234
             A+E+ ++L  +G +PN VTY  +I GFC  G + +A  LF  + ++     PN VTFN
Sbjct: 192 REAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFN 251

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+ G  + +      EL+ +M  R+
Sbjct: 252 ALISGLCKADRLEHAFELVKQMKARD 277



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 130/247 (52%), Gaps = 11/247 (4%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN F +S LI G C  G +  A E +  M    C+ N+   N L+   C+   +++++ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 78  YSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETSTYNTFIDG 134
           +     +GI+  P+V+T N L +G  E+  ++ AL+LF EM+ +  +  E +TY   I  
Sbjct: 61  F-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL-PRVGLMP 193
            CK   + +A +L        C   + A + +  G CK  +++ A++L   +  +    P
Sbjct: 116 YCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++V +N++IHGFC  G++ +A+++   + + G  PN VT+ TL+ G  ++   S+ ++L 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 254 HRMDERN 260
             +  R+
Sbjct: 234 KVLSSRD 240


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 133/238 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +  +LLD M   GV+PN ++Y+  I   C   +++ A ++F  M I+G + N+ TY+ +
Sbjct: 250 SKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAM 309

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYCKT ++ ++  LY E+L   + P VV + TL  G  +  ++  A  LF  M    V
Sbjct: 310 IDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGV 369

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 YN  I G CK+G ++EA  L   +  L     +  Y+ LI+GLC   +L  A  
Sbjct: 370 DPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANR 429

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           LFQ +    + P+ VTYN +IHGFC +  ++KA DL  +M + GV PN +TF+TL+ G
Sbjct: 430 LFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDG 487



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 140/258 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA ++ +LM   GV PN + YS +IDG+C TG + +A  L+  + +   + NVV + T
Sbjct: 284 MEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGT 343

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK +++  + +L+  M+  G+ P +  YN L HG  +   +  A+ L  EM+  +
Sbjct: 344 LVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLN 403

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TY   I+GLC    + EA  LF+ ++  +       Y+ LI G CK   +E A 
Sbjct: 404 LSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKAL 463

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ PN++T++ +I G+C    +  A  L+ +M  KG+ P+ VT+ TL+   
Sbjct: 464 DLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAH 523

Query: 241 IRNNETSKVVELLHRMDE 258
            +     + + L   M E
Sbjct: 524 FKEANMKEALRLYSDMLE 541



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 124/235 (52%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  V+ TL+DGFC   E+  AR LFV M   G   N+  YN LI+G CK+ ++ E++ L
Sbjct: 336 PNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGL 395

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            SEM S  + P V TY  L +GL    ++  A +LF  M++  +   + TYN+ I G CK
Sbjct: 396 LSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCK 455

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              I +A +L   +     E  I  +S LIDG CK+  ++ A  L+  +   G++P+VVT
Sbjct: 456 EYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVT 515

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           Y  +I     +  M +A  L+ DM   G+ PN  TF  L+ G  +    S  ++ 
Sbjct: 516 YTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDF 570



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 126/238 (52%), Gaps = 10/238 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+RL   M    + P++  Y++LI GFC    I++A +L   M  +G   N++T++T
Sbjct: 424 LAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFST 483

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK ++++ ++ LY EM  KGI P VVTY TL    F+   ++ AL+L+ +M  + 
Sbjct: 484 LIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAG 543

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF---------RTLRVLKCELGIEAYSCLIDGLC 171
           +     T+   +DG  K G + +A + +         +++    C   +  ++CLI+GLC
Sbjct: 544 IHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYV-GFTCLIEGLC 602

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           + G +  A   F  +   G+ P++ +Y  M+     + ++     L  DM   G+ PN
Sbjct: 603 QNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPN 660



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  LL  M    + P+ F Y+ LI+G C    +  A  LF  M       + VTYN+
Sbjct: 389 MLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNS 448

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  ++E++L+L SEM S G+ P ++T++TL  G  ++  ++ A+ L+ EM    
Sbjct: 449 LIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKG 508

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T ID   K   + EA  L+  +           ++CL+DG  K G+L  A 
Sbjct: 509 IVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAI 568

Query: 181 ELFQSLPRVGLMPNVVT--------YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           + +    +     ++V         +  +I G C +G + +A   F DM++ GV P+  +
Sbjct: 569 DFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWS 628

Query: 233 FNTLMLGCIRNNETSKVVEL 252
           + +++   +R    +  + L
Sbjct: 629 YVSMLKAHLREKRITDTMML 648



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 119/248 (47%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
            LMI RG+ P+  +YS L       G   +  +L   M   G   NV  Y   I   C+ 
Sbjct: 222 QLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRE 281

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             +EE+  ++  M   G+ P + TY+ +  G  +   +  A  L+ E+  +++      +
Sbjct: 282 NKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVF 341

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            T +DG CK   +V A  LF  +     +  +  Y+CLI G CK G +  A  L   +  
Sbjct: 342 GTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMES 401

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           + L P+V TY I+I+G C + ++ +A+ LF  M+ + + P+ VT+N+L+ G  +     K
Sbjct: 402 LNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEK 461

Query: 249 VVELLHRM 256
            ++L   M
Sbjct: 462 ALDLCSEM 469



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 111/217 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M++ GV PN +VY+ LI G C +G +  A  L   M+      +V TY  LIN
Sbjct: 357 ARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILIN 416

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C  + + E+  L+  M ++ I P+ VTYN+L HG  + + +E AL L  EM  S V  
Sbjct: 417 GLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEP 476

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              T++T IDG CK   I  A  L+  + +      +  Y+ LID   K   ++ A  L+
Sbjct: 477 NIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLY 536

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             +   G+ PN  T+  ++ GF  +G++  A D +L+
Sbjct: 537 SDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLE 573



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 11/243 (4%)

Query: 22  VYSTLIDGFCLTGEIDRA----RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           V+S LI  F   G  + A    RE+  S D   C+        ++NG  + +  +     
Sbjct: 168 VFSLLIMEFLEMGLFEDALWVSREMRCSPDSKACL-------AILNGLVRRRRFDSVWVD 220

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y  M+S+G+ P V  Y+ LF   F+        KL DEM    V      Y  +I  LC+
Sbjct: 221 YQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCR 280

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              + EA ++F  +++      +  YS +IDG CK G L  A+ L++ +    L+PNVV 
Sbjct: 281 ENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVV 340

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           +  ++ GFC   ++  A  LF+ M   GV PN   +N L+ G  ++    + + LL  M+
Sbjct: 341 FGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEME 400

Query: 258 ERN 260
             N
Sbjct: 401 SLN 403



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 3/253 (1%)

Query: 10  LMIQRGVR--PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L + R +R  P++     +++G       D     +  M   G + +V  Y+ L     K
Sbjct: 186 LWVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFK 245

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
                +   L  EM S G++P V  Y      L   +++E A K+F+ M+   V     T
Sbjct: 246 QGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYT 305

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y+  IDG CK G + +A  L++ + V +    +  +  L+DG CK  +L  A  LF  + 
Sbjct: 306 YSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMV 365

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           + G+ PN+  YN +IHG C  G M +A  L  +ME+  ++P+  T+  L+ G       +
Sbjct: 366 KFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLA 425

Query: 248 KVVELLHRM-DER 259
           +   L  RM +ER
Sbjct: 426 EANRLFQRMKNER 438


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 140/258 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   ++D+M+Q G RPN   +++L++G+CL G ++ A  L  +M   G   N   Y TL+
Sbjct: 546 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 605

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L ++ +ML KG++PT V Y+ + HGLF+  +   A K+F EM  S   
Sbjct: 606 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 665

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   + GLC+N    EA  L   L  +  +  I  ++ +I  + K+G+ + A EL
Sbjct: 666 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 725

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PN+ TY++MI     +   ++A +LF+ +E  G A +    N ++   + 
Sbjct: 726 FDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLN 785

Query: 243 NNETSKVVELLHRMDERN 260
             E +K    L  + E N
Sbjct: 786 KAEVAKASNYLSIIGENN 803



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 134/253 (52%), Gaps = 1/253 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + +LM+ +G+ PN  V++ LI+ +   G +D+A  +F  M   G + + VT+ T+I+  C
Sbjct: 409 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 468

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++++L+ ++ M+  G+ P+   Y  L  G     ++  A +L  EM + D+     
Sbjct: 469 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 528

Query: 127 TY-NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            Y ++ I+ LCK G + E  ++   +        +  ++ L++G C +G +E A+ L  +
Sbjct: 529 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 588

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +  +G+ PN   Y  ++ G+C +G++D A  +F DM  KGV P  V ++ ++ G  +   
Sbjct: 589 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 648

Query: 246 TSKVVELLHRMDE 258
           T+   ++ H M E
Sbjct: 649 TTAAKKMFHEMIE 661



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  ++  M+  G+ P+ F YS +IDG C +  +D+A  +   M   G   N +TYN+
Sbjct: 261 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 320

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY  +    ES+ ++ +M S G+ PTV   N+  H LF+  +   A  +FD M    
Sbjct: 321 LIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG 380

Query: 121 VAAETSTYNTFIDGL--CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
              +  +Y+T + G     +  + +   +F  +           ++ LI+   + G ++ 
Sbjct: 381 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 440

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +F+ +   G++P+ VT+  +I   C  G++D A   F  M   GV P+   +  L+ 
Sbjct: 441 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 500

Query: 239 GCIRNNETSKVVELLHRM 256
           GC  + E  K  EL+  M
Sbjct: 501 GCCNHGELVKAKELISEM 518



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 5/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+++GV P   + +++I   C   E+D+A  +   M  +G   ++ TY+ 
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+K ++++  +  +M+  G RP  +TYN+L HG         ++++F +M    
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK--LET 178
           V       N+FI  L K+G   EA  +F ++ +   +  I +YS ++ G        L  
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 405

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              +F  +   G+ PN   +NI+I+ +   G MDKA  +F DM+ KG+ P+ VTF T++ 
Sbjct: 406 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 465

Query: 239 GCIRNNETSKVVELLHRMD 257
              R     ++ + LH+ +
Sbjct: 466 SLCR---IGRLDDALHKFN 481



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 129/251 (51%), Gaps = 3/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+ P+ F YS LI GF   GE+D+A  LF+ M   G +  ++  N++I   CK K+
Sbjct: 202 LLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE 260

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++ ++  +M+  GI P + TY+ +  GL +   ++ A ++ ++M  +     + TYN+
Sbjct: 261 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 320

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G   +G   E+  +F+ +        ++  +  I  L K G+   A  +F S+   G
Sbjct: 321 LIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG 380

Query: 191 LMPNVVTYNIMIHGF--CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             P++++Y+ M+HG+    D  +   H++F  M  KG+APN   FN L+    R     K
Sbjct: 381 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 440

Query: 249 VVELLHRMDER 259
            + +   M  +
Sbjct: 441 AMLIFEDMQNK 451



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 1/152 (0%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           PT+ TYN L      +H+ +  L +   +  + +  +  +Y + I G  K+G + +A  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +        I   + +I  LCK+ +++ A  + Q +   G+ P++ TY+++I G C 
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              MDKA  +   M   G  PN +T+N+L+ G
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 324



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 61/147 (41%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA+ LL+ +    V+ +   ++ +I      G    A+ELF ++   G + N+ TY+ +
Sbjct: 685 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 744

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    K +  EE+ NL+  +   G        N +   L    +V  A      +  +++
Sbjct: 745 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 804

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELF 148
             E ST +       + G   E  +L 
Sbjct: 805 TLEASTISLLASLFSREGKYREHIKLL 831


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 143/259 (55%), Gaps = 2/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYNT 60
            A  ++  MI+ GV  N   Y++LI G+CL   ++ A  +F  M  +  GC+ +VVTYN+
Sbjct: 278 RAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNS 337

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK K V ++++L SEM+ KG+ P V T+ +L  G FE+ +   A +LF  M+   
Sbjct: 338 LIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQG 397

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T    +DGL K     EA  LFR +     +L I  Y+ ++DG+CK+GKL  A 
Sbjct: 398 QVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDAR 457

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL  +  T+NIMI G C +G +D A +L   M+  G  PN  ++N  + G 
Sbjct: 458 KLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGL 517

Query: 241 IRNNETSKVVELLHRMDER 259
           +R  + S+  + L  M ++
Sbjct: 518 LRKYDISRSRKYLQIMKDK 536



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 131/263 (49%), Gaps = 10/263 (3%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLT------GEIDRARELFVSMDINGCMHNVVTYNT 60
           +L LM + G+ P     +T+ +G C+       G+   A E    M       NVV YN 
Sbjct: 134 VLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNA 193

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQVEHALKLFDEM-QH 118
           +++G CK   V E+L L+ EM    + P VVTYN L  GL  E+      + LF+EM   
Sbjct: 194 ILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAE 253

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +  +  T++  ++G CK G ++ A  +   +  +  EL +  Y+ LI G C   ++E 
Sbjct: 254 KGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEE 313

Query: 179 AWELFQSLPR--VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           A  +F  + R   G +P+VVTYN +IHG+C   +++KA  L  +M  KG+ P+  T+ +L
Sbjct: 314 AVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSL 373

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G     +     EL   M ++
Sbjct: 374 IGGFFEVGKPLAAKELFITMKDQ 396



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 11/218 (5%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT------LFHGLFEIHQ 105
           + +V T N LIN  C+ +       +   M   G+ PT+VT NT      + +GL +I  
Sbjct: 109 IADVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGD 168

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
              AL+   +M   ++      YN  +DGLCK G + EA  LF  + V+  E  +  Y+C
Sbjct: 169 TSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNC 228

Query: 166 LIDGLC-KIGKLETAWELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           LI GLC ++G       LF  +    G++P+V T++I+++GFC +G + +A  +   M  
Sbjct: 229 LIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIR 288

Query: 224 KGVAPNCVTFNTLMLG-CIRNN--ETSKVVELLHRMDE 258
            GV  N VT+N+L+ G C+RN   E  +V +L+ R  E
Sbjct: 289 IGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGE 326



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 15/180 (8%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA-AETSTYN 129
           V  S++ +  ML+    P +  +N LF  + +      A+ L   +       A+  T N
Sbjct: 57  VSVSVDFFHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLN 116

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS----------CLIDGLCKIGKLETA 179
             I+ LC+    +    L   +  L  ++G+E             C+++GLCKIG    A
Sbjct: 117 ILINCLCR----LRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGA 172

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E  + + +  L PNVV YN ++ G C  G + +A  LF +M    V PN VT+N L+ G
Sbjct: 173 LESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQG 232


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M   GV P+ + Y+ LID FC  G I++AR  F  M   GC  NVVTY  
Sbjct: 304 VEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTA 363

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           L++ Y K K + ++ ++++ M+  G  P  +TY+ L  GL +  +++ A +++ ++    
Sbjct: 364 LLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTS 423

Query: 117 -----------QHSD-VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
                      +H+D +A    TY   IDGLCK   +V+A EL   +    CE     Y 
Sbjct: 424 DNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYD 483

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK+GK++ A E+F  + + G +P V TY  +I     D ++D A  +   M   
Sbjct: 484 ALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES 543

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              PN VT+  ++ G  R  E  K ++LL  M+E+ 
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKG 579



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           + +AS + + MI  G  PN   YS L+DG C  GEI +A E++  +              
Sbjct: 374 LPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFE 433

Query: 47  --DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
               +    NVVTY  LI+G CK   V ++  L   MLS G  P  + Y+ L  G  ++ 
Sbjct: 434 GKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVG 493

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           ++++A ++F  M          TY + ID + K+  +  A ++   +    C   +  Y+
Sbjct: 494 KIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYT 553

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +IDGLC+IG+ + A +L   +   G  PNVVTY  +I G    G++D +  LF+ M  K
Sbjct: 554 AMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTK 613

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G APN VT+  L+  C       +   LL  M +
Sbjct: 614 GCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQ 647



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 16/275 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A +++ +M+ +G  P+   YS +I   C   ++++A  LF  M   G   +V TY  L
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   +E++ + + EM S G    VVTY  L H   +  Q+  A  +F+ M  +  
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG----------------IEAYSC 165
              T TY+  +DGLCK G I +A E++  L      +G                +  Y  
Sbjct: 390 PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGA 449

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LIDGLCK  K+  A EL  ++   G  PN + Y+ +I GFC  G++D A ++FL M   G
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             P   T+ +L+    ++      +++L +M E +
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESS 544



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 141/325 (43%), Gaps = 71/325 (21%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING------------ 50
           +A  LLD M+  G  PN  +Y  LIDGFC  G+ID A+E+F+ M   G            
Sbjct: 462 DAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLI 521

Query: 51  -----------------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                                  C  NVVTY  +I+G C+  + +++L L S M  KG  
Sbjct: 522 DAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCS 581

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P VVTY  L  GL +  +V+ +L+LF +M     A    TY   I+  C  G + EA  L
Sbjct: 582 PNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSL 641

Query: 148 FRTLR-------------VLK-------CELGI-------------EAYSCLIDGLCKIG 174
              ++             V++         LG+               Y  LID   K G
Sbjct: 642 LSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAG 701

Query: 175 KLETAWELFQSLPRVGLMPNVVT---YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           +LE A EL + +  +    N+ +   Y  +I   C   Q++KA +L+ ++  KGV P   
Sbjct: 702 RLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELS 761

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
            F  L+ G I+ N+ ++ ++L + +
Sbjct: 762 VFVCLIKGLIKVNKWNEALQLCYSI 786



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 128/308 (41%), Gaps = 57/308 (18%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R++++M++ G  PN  ++++L+  +C   +   A +L   M   GC    V YN  I   
Sbjct: 163 RIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSI 222

Query: 66  CKTKDVEE------SLNLYSEMLS-----------------------------------K 84
           C  +++        +  +Y EML+                                   K
Sbjct: 223 CGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGK 282

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P   TY+ +   L E  +VE A  LF EM+   V  +  TY   ID  CK G I +A
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
              F  +R + C   +  Y+ L+    K  +L  A ++F  +   G  PN +TY+ ++ G
Sbjct: 343 RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDG 402

Query: 205 FCNDGQMDKAHDLFLDM-------------EAK---GVAPNCVTFNTLMLGCIRNNETSK 248
            C  G++ KA +++  +             E K    +APN VT+  L+ G  + ++   
Sbjct: 403 LCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVD 462

Query: 249 VVELLHRM 256
             ELL  M
Sbjct: 463 AQELLDAM 470



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 118/262 (45%), Gaps = 36/262 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++L  M++    PN   Y+ +IDG C  GE  +A +L   M+  GC  NVVTY  
Sbjct: 530 LDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTA 589

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH-----GLF-EIHQVEHALK--- 111
           LI+G  K+  V+ SL L+ +M +KG  P  VTY  L +     GL  E H +   +K   
Sbjct: 590 LIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 649

Query: 112 ------------------------LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                                   L +E++          Y   ID   K G + EA EL
Sbjct: 650 WPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALEL 709

Query: 148 FRTLRVLKCELGIEA---YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            + +  L   L I +   Y+ LI  LC   +LE A+EL+  + R G++P +  +  +I G
Sbjct: 710 HKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKG 769

Query: 205 FCNDGQMDKAHDLFLDMEAKGV 226
                + ++A  L   +  +GV
Sbjct: 770 LIKVNKWNEALQLCYSICDEGV 791



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 6/261 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA   L  M      PN   Y TL+ GF    ++   + +   M   GC  N   +N+L
Sbjct: 124 DEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSL 183

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH------ALKLFDE 115
           ++ YC  +D   +  L   M   G  P  V YN     +    ++        A K+++E
Sbjct: 184 VHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEE 243

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M  S           F   LC  G    A ++ + +           YS +I  LC+  K
Sbjct: 244 MLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMK 303

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +E A+ LFQ +  VG+ P+V TY I+I  FC  G +++A   F +M + G + N VT+  
Sbjct: 304 VEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTA 363

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+   ++  +  +  ++ +RM
Sbjct: 364 LLHAYLKAKQLPQASDIFNRM 384



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 7/181 (3%)

Query: 80  EMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
           E+   G RP+  TYN L   L    Q++   ++  EM  S    +  T   F   LCK G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +A      + + + +  ++   C  +I GL +    + A      +     +PNVVT
Sbjct: 90  RWSDA-----LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT 144

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  ++ GF    Q+     +   M  +G  PN   FN+L+       +     +LL RM 
Sbjct: 145 YRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMA 204

Query: 258 E 258
           +
Sbjct: 205 D 205


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 144/249 (57%), Gaps = 3/249 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A++  D M+ + + P+   Y+TLI GF   G++   + LF  M   G   + VTY TLI+
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLID 441

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            YCK  ++  + +L++EM+  G+ P +VTY  L  GL +  +++ A +L DEM+   +  
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YN+ ++G+CK G I +A +L + + V   +     Y+ +ID  C++G ++ A +L 
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           Q +   GL P VVT+N++++GFC  G ++    L   M  KG+ P+ +T+NTLM   CIR
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 243 N--NETSKV 249
           N  N T+K+
Sbjct: 622 NSMNTTTKI 630



 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 137/257 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA RLL  M  R   P+   YST+IDG+C  GE+ +A +L   M I G   N  TYN+
Sbjct: 274 VKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNS 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK     E+  +  EM+S+ I P  V Y TL HG F++  V  A K FDEM    
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TY T I G  + G ++E   LF  +     +     Y+ LID  CK G++  A+
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + ++G+ PN+VTY  +I G C  G++D A++L  +M  KG+  N   +N+++ G 
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513

Query: 241 IRNNETSKVVELLHRMD 257
            +     + ++L+  M+
Sbjct: 514 CKAGNIEQAIKLMKEME 530



 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 131/237 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++L  M+ + + P+  VY+TLI GF   G +  A + F  M       + +TY TLI
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLI 405

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+ +   V E  NL+ EM+S+G++P  VTY TL     +  ++ +A  L +EM    + 
Sbjct: 406 QGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMT 465

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDGLCK+G +  A EL   +R    +L +  Y+ +++G+CK G +E A +L
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +   G+ P+ +TY  +I  +C  G +DKAH L  +M  +G+ P  VTFN LM G
Sbjct: 526 MKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 133/257 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   L   MI RG++P+   Y+TLID +C  GE+  A  L   M   G   N+VTY  LI
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALI 475

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  +++ +  L  EM  KG++  V  YN++ +G+ +   +E A+KL  EM+ + + 
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T ID  C+ G I +A +L + +     +  +  ++ L++G C +G LE    L
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G++P+ +TYN ++   C    M+    ++  M  +GVAP+  T+N L+ G  +
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655

Query: 243 NNETSKVVELLHRMDER 259
                +   L   M E+
Sbjct: 656 ARNLKEAWFLYKEMIEK 672



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 130/240 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LLD M ++G++ N  +Y+++++G C  G I++A +L   M++ G   + +TY T
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ YC+  D++++  L  EML +G++PTVVT+N L +G   +  +E   +L   M    
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT +   C    +    ++++ +R          Y+ LI G CK   L+ AW
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +   G +P V +YN +I  F    ++ +A +LF +M   G+  +   +N  +  C
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMC 723



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  L + M+Q G+ PN   Y  LIDG C  GE+D A EL   M   G   NV  YN+
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  ++E+++ L  EM   GI P  +TY T+      +  ++ A KL  EM    
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           +     T+N  ++G C  G + +   L   +     E GI      Y+ L+   C    +
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM----LEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            T  ++++ +   G+ P+  TYNI+I G C    + +A  L+ +M  KG  P   ++N L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 237 MLGCIRNNETSKVVELLHRM 256
           +    +  +  +  EL   M
Sbjct: 685 IKRFYKKKKILEARELFEEM 704


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 144/249 (57%), Gaps = 3/249 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A++  D M+ + + P+   Y+TLI GF   G++   + LF  M   G   + VTY TLI+
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLID 441

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            YCK  ++  + +L++EM+  G+ P +VTY  L  GL +  +++ A +L DEM+   +  
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YN+ ++G+CK G I +A +L + + V   +     Y+ +ID  C++G ++ A +L 
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           Q +   GL P VVT+N++++GFC  G ++    L   M  KG+ P+ +T+NTLM   CIR
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 243 N--NETSKV 249
           N  N T+K+
Sbjct: 622 NSMNTTTKI 630



 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 137/257 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA RLL  M  R   P+   YST+IDG+C  GE+ +A +L   M I G   N  TYN+
Sbjct: 274 VKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNS 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK     E+  +  EM+S+ I P  V Y TL HG F++  V  A K FDEM    
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TY T I G  + G ++E   LF  +     +     Y+ LID  CK G++  A+
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + ++G+ PN+VTY  +I G C  G++D A++L  +M  KG+  N   +N+++ G 
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513

Query: 241 IRNNETSKVVELLHRMD 257
            +     + ++L+  M+
Sbjct: 514 CKAGNIEQAIKLMKEME 530



 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 131/237 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++L  M+ + + P+  VY+TLI GF   G +  A + F  M       + +TY TLI
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLI 405

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+ +   V E  NL+ EM+S+G++P  VTY TL     +  ++ +A  L +EM    + 
Sbjct: 406 QGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMT 465

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDGLCK+G +  A EL   +R    +L +  Y+ +++G+CK G +E A +L
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +   G+ P+ +TY  +I  +C  G +DKAH L  +M  +G+ P  VTFN LM G
Sbjct: 526 MKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 133/257 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   L   MI RG++P+   Y+TLID +C  GE+  A  L   M   G   N+VTY  LI
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALI 475

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  +++ +  L  EM  KG++  V  YN++ +G+ +   +E A+KL  EM+ + + 
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T ID  C+ G I +A +L + +     +  +  ++ L++G C +G LE    L
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G++P+ +TYN ++   C    M+    ++  M  +GVAP+  T+N L+ G  +
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655

Query: 243 NNETSKVVELLHRMDER 259
                +   L   M E+
Sbjct: 656 ARNLKEAWFLYKEMIEK 672



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 129/240 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LLD M ++G++ N  +Y+++++G C  G I++A +L   M++ G   + +TY T
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ YC+  D++++  L  EML +G++PTVVT+N L +G   +  +E   +L   M    
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT +   C    +    ++++ +R          Y+ LI G CK   L+ AW
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +   G +P V +YN +I  F    +  +A +LF +M   G+  +   +N  +  C
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMC 723



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  L + M+Q G+ PN   Y  LIDG C  GE+D A EL   M   G   NV  YN+
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  ++E+++ L  EM   GI P  +TY T+      +  ++ A KL  EM    
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           +     T+N  ++G C  G + +   L   +     E GI      Y+ L+   C    +
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM----LEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            T  ++++ +   G+ P+  TYNI+I G C    + +A  L+ +M  KG  P   ++N L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 237 MLGCIRNNETSKVVELLHRM 256
           +    +  +  +  EL   M
Sbjct: 685 IKRFYKKRKFXEARELFEEM 704


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 141/237 (59%), Gaps = 5/237 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M +R V PN FVY+ LI G C    I  A +LF  M +   + N VT+NTLI+
Sbjct: 85  AMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLID 144

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK  +V+ ++ L   M  + + P+++T+N+L  GL +  ++E A  + +E++ +    
Sbjct: 145 GYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVP 204

Query: 124 ETSTYNTFIDGLCKNGYIVEAA-ELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAW 180
           +  TY+   DGL K+     AA +L+R    +   + I+ Y+C  L++GLCK GK+E A 
Sbjct: 205 DGFTYSIIFDGLLKSDDGAGAALDLYR--EAIGKGVKIDNYTCSILLNGLCKEGKVEKAE 262

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E+ +SL   GL+P  V YN +++G+C  G MD+A      ME++G+ PNC+ FN+++
Sbjct: 263 EVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVI 319



 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 140/258 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +L  +++ G+ P   +Y+T+++G+C  G++DRA      M+  G   N + +N+
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNS 317

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +C+ + ++++     +M+ KGI P+V TYN L  G   +       ++ +EM+ + 
Sbjct: 318 VIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENG 377

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y + I+ LCK+G I+EA  + R +           Y+ LIDG C +GKL  A 
Sbjct: 378 EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  + + G+   +VTYN +I G C  G++ +A ++F  + + G  P+ +T+N+L+ G 
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497

Query: 241 IRNNETSKVVELLHRMDE 258
                + K +EL   M +
Sbjct: 498 SNAGNSQKCLELYETMKK 515



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 123/242 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A   ++ M  RG+RPN   ++++ID FC    ID+A E    M   G   +V TYN 
Sbjct: 293 MDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNI 352

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY +         +  EM   G +P V++Y +L + L +  ++  A  +  +M    
Sbjct: 353 LIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRG 412

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    + YN  IDG C  G + EA   F  +        I  Y+ LI GLCK+GKL+ A 
Sbjct: 413 VLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +   G  P+V+TYN +I G+ N G   K  +L+  M+  G+ P   TF+ L+ GC
Sbjct: 473 EMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGC 532

Query: 241 IR 242
            +
Sbjct: 533 SK 534



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 34/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   +  M+ +G+ P+   Y+ LIDG+       R  ++   M+ NG   NV++Y +
Sbjct: 328 IDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGS 387

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   + E+  +  +M+ +G+ P    YN L  G   + ++  AL+ FDEM  + 
Sbjct: 388 LINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNG 447

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A   TYN+ I GLCK G + EA E+F  +        +  Y+ LI G    G  +   
Sbjct: 448 IGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCL 507

Query: 181 ELFQSLPRVGLMPNV----------------------------------VTYNIMIHGFC 206
           EL++++ ++GL P +                                  V YN MIH + 
Sbjct: 508 ELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQ 567

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             G + KA  L  +M   GV P+  T+N+L+LG ++  + S+  +L+  M  +
Sbjct: 568 ETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAK 620



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA R  D M + G+      Y++LI G C  G++  A E+F  +   G   +V+TYN+
Sbjct: 433 LREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNS 492

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY    + ++ L LY  M   G++PT+ T++ L  G  +   ++    LF+EM   +
Sbjct: 493 LISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSK-EGIKLKETLFNEMLQMN 551

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   YN  I    + G++ +A  L + +  +      + Y+ LI G  K GKL    
Sbjct: 552 LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETK 611

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL+P   TY+++I G C+    + A+  + +M   G  PN    N L  G 
Sbjct: 612 DLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGL 671

Query: 241 IRNNETSKVVELLHRM 256
            ++    +   +   M
Sbjct: 672 RKDGRLQEAQSICSEM 687



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           + S L D M Q G  P+      +++    + + D   +LF  M   G   + + Y   +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               K  D++ ++ L+  M  + + P V  YN L  GL +  ++  A KLF EM   ++ 
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT IDG CK G +  A  L   ++  K E  I  ++ L+ GLCK  ++E A  +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
              +   G +P+  TY+I+  G   +D     A DL+ +   KGV  +  T + L+ G  
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253

Query: 242 RNNETSKVVELLHRMDE 258
           +  +  K  E+L  + E
Sbjct: 254 KEGKVEKAEEVLKSLVE 270



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 39/294 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L + M +  V P+   +++L+ G C    I+ AR +   +  NG + +  TY+ 
Sbjct: 152 VDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSI 211

Query: 61  LINGYCKTKD-VEESLNLYSEMLSKGIR-------------------------------- 87
           + +G  K+ D    +L+LY E + KG++                                
Sbjct: 212 IFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEH 271

Query: 88  ---PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
              P  V YNT+ +G  +I  ++ A+   ++M+   +      +N+ ID  C+   I +A
Sbjct: 272 GLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKA 331

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E  + +        +E Y+ LIDG  ++      +++ + +   G  PNV++Y  +I+ 
Sbjct: 332 EEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINC 391

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            C DG++ +A  +  DM  +GV PN   +N L+ G        K+ E L   DE
Sbjct: 392 LCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT---VGKLREALRFFDE 442



 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 22/95 (23%), Positives = 42/95 (44%)

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +++ L +  K +   +LF+ +  +G  P+ + Y   +      G +  A +LF  M+ + 
Sbjct: 37  IVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK 96

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           V PN   +N L+ G  +        +L   M  RN
Sbjct: 97  VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRN 131


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 140/258 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   ++D+M+Q G RPN   +++L++G+CL G ++ A  L  +M   G   N   Y TL+
Sbjct: 526 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 585

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L ++ +ML KG++PT V Y+ + HGLF+  +   A K+F EM  S   
Sbjct: 586 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 645

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   + GLC+N    EA  L   L  +  +  I  ++ +I  + K+G+ + A EL
Sbjct: 646 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 705

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PN+ TY++MI     +   ++A +LF+ +E  G A +    N ++   + 
Sbjct: 706 FDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLN 765

Query: 243 NNETSKVVELLHRMDERN 260
             E +K    L  + E N
Sbjct: 766 KAEVAKASNYLSIIGENN 783



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 134/253 (52%), Gaps = 1/253 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + +LM+ +G+ PN  V++ LI+ +   G +D+A  +F  M   G + + VT+ T+I+  C
Sbjct: 389 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 448

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++++L+ ++ M+  G+ P+   Y  L  G     ++  A +L  EM + D+     
Sbjct: 449 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 508

Query: 127 TY-NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            Y ++ I+ LCK G + E  ++   +        +  ++ L++G C +G +E A+ L  +
Sbjct: 509 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 568

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +  +G+ PN   Y  ++ G+C +G++D A  +F DM  KGV P  V ++ ++ G  +   
Sbjct: 569 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 628

Query: 246 TSKVVELLHRMDE 258
           T+   ++ H M E
Sbjct: 629 TTAAKKMFHEMIE 641



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  ++  M+  G+ P+ F YS +IDG C +  +D+A  +   M   G   N +TYN+
Sbjct: 241 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 300

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY  +    ES+ ++ +M S G+ PTV   N+  H LF+  +   A  +FD M    
Sbjct: 301 LIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG 360

Query: 121 VAAETSTYNTFIDGL--CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
              +  +Y+T + G     +  + +   +F  +           ++ LI+   + G ++ 
Sbjct: 361 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 420

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +F+ +   G++P+ VT+  +I   C  G++D A   F  M   GV P+   +  L+ 
Sbjct: 421 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 480

Query: 239 GCIRNNETSKVVELLHRM 256
           GC  + E  K  EL+  M
Sbjct: 481 GCCNHGELVKAKELISEM 498



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 5/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+++GV P   + +++I   C   E+D+A  +   M  +G   ++ TY+ 
Sbjct: 206 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 265

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+K ++++  +  +M+  G RP  +TYN+L HG         ++++F +M    
Sbjct: 266 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 325

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK--LET 178
           V       N+FI  L K+G   EA  +F ++ +   +  I +YS ++ G        L  
Sbjct: 326 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 385

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              +F  +   G+ PN   +NI+I+ +   G MDKA  +F DM+ KG+ P+ VTF T++ 
Sbjct: 386 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 445

Query: 239 GCIRNNETSKVVELLHRMD 257
              R     ++ + LH+ +
Sbjct: 446 SLCR---IGRLDDALHKFN 461



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 129/251 (51%), Gaps = 3/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+ P+ F YS LI GF   GE+D+A  LF+ M   G +  ++  N++I   CK K+
Sbjct: 182 LLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKE 240

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++ ++  +M+  GI P + TY+ +  GL +   ++ A ++ ++M  +     + TYN+
Sbjct: 241 MDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNS 300

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G   +G   E+  +F+ +        ++  +  I  L K G+   A  +F S+   G
Sbjct: 301 LIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKG 360

Query: 191 LMPNVVTYNIMIHGF--CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             P++++Y+ M+HG+    D  +   H++F  M  KG+APN   FN L+    R     K
Sbjct: 361 PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 420

Query: 249 VVELLHRMDER 259
            + +   M  +
Sbjct: 421 AMLIFEDMQNK 431



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 1/152 (0%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           PT+ TYN L      +H+ +  L +   +  + +  +  +Y + I G  K+G + +A  L
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 212

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F  +        I   + +I  LCK+ +++ A  + Q +   G+ P++ TY+++I G C 
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              MDKA  +   M   G  PN +T+N+L+ G
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 304



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 59/140 (42%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA+ LL+ +    V+ +   ++ +I      G    A+ELF ++   G + N+ TY+ +
Sbjct: 665 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 724

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    K +  EE+ NL+  +   G        N +   L    +V  A      +  +++
Sbjct: 725 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 784

Query: 122 AAETSTYNTFIDGLCKNGYI 141
             E ST +       + G I
Sbjct: 785 TLEASTISLLASLFSREGMI 804


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  163 bits (413), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 140/253 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +++DLM+Q G  P+ F Y+T+I+     GE+D A+ +   M   GC+ +  T+NTLI 
Sbjct: 319 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 378

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    +EE+L+L  E+  KG+ P V T+N L + L ++      ++LF+EM+ S  A 
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ID LC  G +V A +L + +    C      Y+ +ID LCK  ++E A E+F
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  + VT+N +I G C   ++D A +L   M  +G+ P+ +T+N+++    + 
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558

Query: 244 NETSKVVELLHRM 256
            +  K  ++L  M
Sbjct: 559 GDLKKAADILETM 571



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +++ M+ RG  P+   ++TLI   C    ++ A +L   + + G   +V T+N 
Sbjct: 351 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK  D    + L+ EM S G  P  VTYN L   L  + ++ +AL L  EM+ + 
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYNT ID LCK   I EA E+F  +           ++ LIDGLCK  +++ A 
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + + + GL P+ +TYN ++  +C  G + KA D+   M A G   + VT+ TL+ G 
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 241 IRNNETSKVVELLHRM 256
            +   T   ++LL  M
Sbjct: 591 CKAGRTQVALKLLRGM 606



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 123/237 (51%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RL + M   G  P+   Y+ LID  C  G++  A +L   M+ NGC  + VTYNT+I+  
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDAL 485

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK   +EE+  ++ +M + GI  + VT+NTL  GL +  +++ A +L ++M    +    
Sbjct: 486 CKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSN 545

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN+ +   CK G + +AA++  T+     E+ +  Y  LI+GLCK G+ + A +L + 
Sbjct: 546 ITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 605

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +   G+ P    YN +I        +  A  LF +M   G  P+ +T+  +  G  R
Sbjct: 606 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCR 662



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 119/231 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+ M    V P+   ++TL+ GF   G I+ A  +   M   GC    VT N LINGYC
Sbjct: 217 MLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYC 276

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   VE++L    + ++ G  P  VTYNT  H L +   V HALK+ D M       +  
Sbjct: 277 KMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVF 336

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT I+ L KNG + EA  +   +    C      ++ LI  LC   +LE A +L + L
Sbjct: 337 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL 396

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              GL P+V T+NI+I+  C  G       LF +M++ G AP+ VT+N L+
Sbjct: 397 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILI 447



 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 122/236 (51%), Gaps = 1/236 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M   G   +   Y+T+ID  C    I+ A E+F  MD +G   + VT+NTLI+G C
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLC 521

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K K ++++  L  +M+ +G++P+ +TYN++     +   ++ A  + + M  +    +  
Sbjct: 522 KAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVV 581

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T I+GLCK G    A +L R +R+       +AY+ +I  L +   L  A  LF+ +
Sbjct: 582 TYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREM 641

Query: 187 PRVGLMPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             VG  P+ +TY I+  G C   G + +A D  ++M  KG  P   +F  L  G +
Sbjct: 642 TEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 697



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 125/245 (51%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I  G  P+   Y+T +   C  G +  A ++   M   G   +V TYNT+IN   K  ++
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 351

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E+  + ++M+ +G  P   T+NTL   L   +++E AL L  E+    ++ +  T+N  
Sbjct: 352 DEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNIL 411

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+ LCK G       LF  ++   C      Y+ LID LC +GKL  A +L + +   G 
Sbjct: 412 INALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGC 471

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             + VTYN +I   C   ++++A ++F  M+A G++ + VTFNTL+ G  +        E
Sbjct: 472 PRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATE 531

Query: 252 LLHRM 256
           L+ +M
Sbjct: 532 LIEQM 536



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 1/250 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYNTLINGYCKTK 69
           M + G    A V  + ++ +      D A +L  + ++  G   +   YN L+N   +  
Sbjct: 115 MRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGS 174

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            ++   ++Y+EM  +GI+P VVT NTL   L   HQV  A+ + +EM    VA + +T+ 
Sbjct: 175 RMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFT 234

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T + G  + G I  A  +   +    C       + LI+G CK+G++E A    Q     
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD 294

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+ VTYN  +H  C +G +  A  +   M  +G  P+  T+NT++    +N E  + 
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354

Query: 250 VELLHRMDER 259
             ++++M +R
Sbjct: 355 KGIVNQMVDR 364



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 1/213 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  + D M   G+  +A  ++TLIDG C    ID A EL   M   G   + +TYN+
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNS 550

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++  YCK  D++++ ++   M + G    VVTY TL +GL +  + + ALKL   M+   
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 610

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK-IGKLETA 179
           +      YN  I  L +   + +A  LFR +  +        Y  +  GLC+  G ++ A
Sbjct: 611 IRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEA 670

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           ++    +   G MP   ++ ++  G  N G  D
Sbjct: 671 FDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDD 703



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 7/127 (5%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  M  +G+RP    Y+ +I        +  A  LF  M   G   + +TY  +  
Sbjct: 599 ALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFR 658

Query: 64  GYCKTK-DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH---ALKLFDE---M 116
           G C+    ++E+ +   EM++KG  P   ++  L  GL  +   ++   A++L  E    
Sbjct: 659 GLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKF 718

Query: 117 QHSDVAA 123
           + SDV+A
Sbjct: 719 RESDVSA 725


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 137/257 (53%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +  +M++RG +P+   Y+ L++GFCL+  +  ARELF  M   G   +V+ YN LI
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   V+E++ L+ E+  K + P + TYN+L  GL ++ ++    +L DEM     +
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQS 402

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN F+D  CK+    +A  LFR + V         Y  +++  CK  KL+ A E 
Sbjct: 403 PDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEA 461

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q L   G  PNV TY IMI+  C D   D+A  L   M+     P+ VTF T++     
Sbjct: 462 LQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQE 521

Query: 243 NNETSKVVELLHRMDER 259
            NET K  +L   M ER
Sbjct: 522 RNETDKAEKLRLEMIER 538



 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 141/252 (55%), Gaps = 1/252 (0%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LDLM  +G   + F Y +LI+G C  G+   A +L   M+ +    N++TY+T+I+G CK
Sbjct: 149 LDLM-AKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCK 207

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            + + ++L L+S + S+GI   VV YN+L HG   + Q   A +L   M   ++  +  T
Sbjct: 208 DRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYT 267

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +N  +D LCK G IVEA  +F  +     +  I  Y+ L++G C    +  A ELF  + 
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           + GL P+V+ YN++I+G+C    +D+A  LF ++  K + PN  T+N+L+ G  +    S
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387

Query: 248 KVVELLHRMDER 259
            V EL+  M +R
Sbjct: 388 CVQELVDEMCDR 399



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 140/262 (53%), Gaps = 9/262 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+RLL +M++  + P+ + ++ L+D  C  G I  A+ +F  M   G   ++VTYN L+
Sbjct: 248 EATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALM 307

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C + +V E+  L++ M+ +G+ P V+ YN L +G  +I  V+ A+ LF E++  ++ 
Sbjct: 308 EGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLV 367

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG----IEAYSCLIDGLCKIGKLET 178
              +TYN+ IDGLCK G +    EL   +    C+ G    I  Y+  +D  CK    E 
Sbjct: 368 PNLATYNSLIDGLCKLGRMSCVQELVDEM----CDRGQSPDIVTYNIFLDAFCKSKPYEK 423

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  LF+ + + G+ P+   Y++++  FC   ++  A +    +   G  PN  T+  ++ 
Sbjct: 424 AISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMIN 482

Query: 239 GCIRNNETSKVVELLHRMDERN 260
              ++    + + LL +MD+ +
Sbjct: 483 ALCKDCSFDEAMTLLSKMDDND 504



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 134/256 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   +  +G+ P+    + LI+ +C    +  A  L  ++   G   N+VT+NTLIN
Sbjct: 74  AISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLIN 133

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    V +++    ++++KG      +Y +L +GL +  Q   AL+L  +M+   V  
Sbjct: 134 GFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRP 193

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY+T IDGLCK+  I +A  LF  +      + + AY+ LI G C +G+   A  L 
Sbjct: 194 NLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLL 253

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + R  + P+  T+NI++   C +G++ +A  +F  M  +G  P+ VT+N LM G   +
Sbjct: 254 TMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLS 313

Query: 244 NETSKVVELLHRMDER 259
           N  S+  EL +RM +R
Sbjct: 314 NNVSEARELFNRMVKR 329



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 123/236 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  +++ G +PN   ++TLI+GFC+ G + +A    + +   G   +  +Y +LIN
Sbjct: 109 AFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLIN 168

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK     ++L L  +M    +RP ++TY+T+  GL +   +  AL+LF  +    +  
Sbjct: 169 GLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILV 228

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   YN+ I G C  G   EA  L   +           ++ L+D LCK G++  A  +F
Sbjct: 229 DVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVF 288

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             + + G  P++VTYN ++ GFC    + +A +LF  M  +G+ P+ + +N L+ G
Sbjct: 289 AVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 127/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  M +  VRPN   YST+IDG C    I  A  LF  +   G + +VV YN+LI
Sbjct: 178 DALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLI 237

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C      E+  L + M+   I P   T+N L   L +  ++  A  +F  M      
Sbjct: 238 HGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEK 297

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ++G C +  + EA ELF  +     E  +  Y+ LI+G CKI  ++ A  L
Sbjct: 298 PDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVL 357

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +    L+PN+ TYN +I G C  G+M    +L  +M  +G +P+ VT+N  +    +
Sbjct: 358 FKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCK 417

Query: 243 NNETSKVVELLHRM 256
           +    K + L  ++
Sbjct: 418 SKPYEKAISLFRQI 431



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 1/227 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M++RG+ P+   Y+ LI+G+C    +D A  LF  +     + N+ TYN+
Sbjct: 316 VSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNS 375

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +     L  EM  +G  P +VTYN       +    E A+ LF ++    
Sbjct: 376 LIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQG- 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+  ++  CK   +  A E  + L +  C   +  Y+ +I+ LCK    + A 
Sbjct: 435 IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAM 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            L   +      P+ VT+  +I       + DKA  L L+M  +G+ 
Sbjct: 495 TLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 35/250 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+++   P  FV+  L+      G    A  LF  +   G   ++ T   LIN YC    
Sbjct: 46  MLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAH 105

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  + +L   +L  G +P +VT+NTL                                  
Sbjct: 106 LSFAFSLLGTILKMGFQPNMVTFNTL---------------------------------- 131

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+G C NG + +A      L      L   +Y  LI+GLCK G+   A +L Q +    
Sbjct: 132 -INGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDL 190

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PN++TY+ +I G C D  +  A  LF  + ++G+  + V +N+L+ GC    +  +  
Sbjct: 191 VRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREAT 250

Query: 251 ELLHRMDERN 260
            LL  M   N
Sbjct: 251 RLLTMMVRGN 260



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 77/157 (49%)

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           + H V+  L  F+ M           ++  +  + + G+   A  LF  L        I 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             + LI+  C    L  A+ L  ++ ++G  PN+VT+N +I+GFC +G + KA    LD+
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            AKG   +  ++ +L+ G  +N +T   ++LL +M+E
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEE 188



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 84/193 (43%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   V+++L  ++ ML K   P +  ++ L   +  +     A+ LF ++    +    +
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T    I+  C   ++  A  L  T+  +  +  +  ++ LI+G C  G +  A      L
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G   +  +Y  +I+G C +GQ   A  L   ME   V PN +T++T++ G  ++   
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 247 SKVVELLHRMDER 259
           +  + L   +  R
Sbjct: 212 ADALRLFSLVTSR 224


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 139/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R L+ M   G +PN   ++ ++   C TG    A +    M   GC  +VVT+N 
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNI 357

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  C+   +  ++++  +M   G  P  ++YN L H L +  ++E A++  D M    
Sbjct: 358 LINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYNT +  LCK+G +  A E+   L    C   +  Y+ +IDGL K+GK + A 
Sbjct: 418 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAI 477

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL P+++TY+ ++ G   +G++D+A   F D+E  GV PN +T+N++MLG 
Sbjct: 478 KLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 537

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +T + ++ L  M  R
Sbjct: 538 CKARQTVRAIDFLAYMVAR 556



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 140/258 (54%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  + L+ M+ RG  P+    ++LI G C TG+  +A  +   ++ +G + +V+TYN 
Sbjct: 126 LEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNV 185

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCKT ++  +L L   M    + P VVTYNT+   L +  +++ A+++ D     +
Sbjct: 186 LISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE 242

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   I+  CK   + +A +L   +R   C+  +  Y+ LI+G+CK G+L+ A 
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 302

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +P  G  PNV+T+NI++   C+ G+   A     +M  KG +P+ VTFN L+   
Sbjct: 303 RFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL 362

Query: 241 IRNNETSKVVELLHRMDE 258
            R     + +++L +M +
Sbjct: 363 CRKGLIGRAIDVLEKMPQ 380



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 132/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +LD  +QR   P+   Y+ LI+  C    + +A +L   M   GC  +VVTYN 
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++E++   + M S G +P V+T+N +   +    +   A K   EM    
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    T+N  I+ LC+ G I  A ++   +    C     +Y+ L+  LCK  K+E A 
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G  P++VTYN ++   C DG++D A ++   + +KG +P  +T+NT++ G 
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +T   ++LL  M  +
Sbjct: 468 SKVGKTDDAIKLLDEMKGK 486



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 135/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A + L  MI++G  P+   ++ LI+  C  G I RA ++   M  +GC  N ++YN L+
Sbjct: 335 DAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLL 394

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K +E ++     M+S+G  P +VTYNTL   L +  +V+ A+++ +++     +
Sbjct: 395 HALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCS 454

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G   +A +L   ++    +  I  YS L+ GL + GK++ A   
Sbjct: 455 PVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAF 514

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  L  +G+ PN +TYN ++ G C   Q  +A D    M A+G  P   ++  L+ G   
Sbjct: 515 FHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAY 574

Query: 243 NNETSKVVELLHRMDER 259
                + +ELL+ +  R
Sbjct: 575 EGLAKEALELLNELCSR 591



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 141/289 (48%), Gaps = 32/289 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING------------ 50
           +A+R+++++   G  P+   Y+ LI G+C TGEI  A +L   M ++             
Sbjct: 163 KATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTL 222

Query: 51  --------------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                               C  +V+TY  LI   CK   V +++ L  EM  KG +P V
Sbjct: 223 CDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDV 282

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           VTYN L +G+ +  +++ A++  + M          T+N  +  +C  G  ++A +    
Sbjct: 283 VTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAE 342

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C   +  ++ LI+ LC+ G +  A ++ + +P+ G  PN ++YN ++H  C D +
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           M++A +    M ++G  P+ VT+NTL+    ++ +    VE+L+++  +
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSK 451



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 119/226 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M Q G  PN+  Y+ L+   C   +++RA E    M   GC  ++VTYNT
Sbjct: 368 IGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNT 427

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK   V+ ++ + +++ SKG  P ++TYNT+  GL ++ + + A+KL DEM+   
Sbjct: 428 LLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKG 487

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T + GL + G + EA   F  L  +  +     Y+ ++ GLCK  +   A 
Sbjct: 488 LKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAI 547

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +    +   G  P   +Y I+I G   +G   +A +L  ++ ++GV
Sbjct: 548 DFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 104/202 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A   LD+M+ RG  P+   Y+TL+   C  G++D A E+   +   GC   ++TYNT
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K    ++++ L  EM  KG++P ++TY+TL  GL    +V+ A+  F +++   
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN+ + GLCK    V A +    +    C+    +Y  LI+GL   G  + A 
Sbjct: 523 VKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEAL 582

Query: 181 ELFQSLPRVGLMPNVVTYNIMI 202
           EL   L   G++       +++
Sbjct: 583 ELLNELCSRGVVKKSSAEQVVV 604



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 3/190 (1%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  ++EE      +M+ +G  P ++   +L  GL +  +   A ++ + ++ S    +  
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G CK G I  A +L   + V      +  Y+ ++  LC  GKL+ A E+    
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            +    P+V+TY I+I   C +  + +A  L  +M  KG  P+ VT+N L+ G  +    
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 247 SKVVELLHRM 256
            + +  L+ M
Sbjct: 299 DEAIRFLNHM 308



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 45/87 (51%)

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           L + G+LE  ++  + +   G +P+++    +I G C  G+  KA  +   +E  G  P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            +T+N L+ G  +  E    ++LL RM
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM 206


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 133/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYN L +GL +   ++ A  L  EM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E    +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 115/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMX 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +A+DL  +M  KG+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +        E   RM E N
Sbjct: 325 DGCCKEGNLBTAFEHRXRMIEEN 347



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 130/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A  +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 193 LDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +B A +    M  + +  + V +  L+ G  +        
Sbjct: 313 LKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLRXM 378



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 115/244 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 69  RSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 129 FYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 189 RLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXV 248

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+N L+ G  +  +  +  +L+  M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEM 308

Query: 257 DERN 260
             + 
Sbjct: 309 SMKG 312


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 147/259 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A    D ++  G + N   Y TLI+G C  G+   A E+   +D      +VV YNT
Sbjct: 155 IHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNT 214

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK K V ++ + YSEM++K I PTVVTYNTL  GL  + Q++ A+ L  +M   +
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T++  +D  CK G + EA  +F  +     +  I  Y+ L++G C + ++  A 
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAE 334

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++ ++G+ P+V +Y+IMI GFC    +D+A  LF +M  K + P+ VT+N+L+ G 
Sbjct: 335 SIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGL 394

Query: 241 IRNNETSKVVELLHRMDER 259
            ++   S  ++L+  M +R
Sbjct: 395 CKSGRISYALKLIGEMHDR 413



 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 133/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  MI   + P  + +S L+D FC  G++  A+ +FV M       N+VTYN+
Sbjct: 260 LKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNS 319

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYC   +V ++ ++++ M   G+ P V +Y+ +  G  +I  V+ A+KLF+EM    
Sbjct: 320 LMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQ 379

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ IDGLCK+G I  A +L   +        I  Y+ L+D LCK   ++ A 
Sbjct: 380 IFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAI 439

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           EL   L    + P+V TYNI+I+G C  G++  A  +F D+   G   +  T+NT++ G
Sbjct: 440 ELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKG 498



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 128/209 (61%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +  +M+++ V+PN   Y++L++G+CL  E+++A  +F +M   G   +V +Y+ 
Sbjct: 295 VKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSI 354

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+CK K V+E++ L+ EM  K I P VVTYN+L  GL +  ++ +ALKL  EM    
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN+ +D LCKN ++ +A EL   L+    +  +  Y+ LI+GLCK G+L+ A 
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQ 474

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
           ++F+ +   G   +V TYN MI GFC  G
Sbjct: 475 KVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 132/245 (53%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           VR +  +Y+T+IDG C    ++ A + +  M        VVTYNTLI G C    +++++
Sbjct: 205 VRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAI 264

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  +M+ + I PTV T++ L     +  +V+ A  +F  M   DV     TYN+ ++G 
Sbjct: 265 GLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGY 324

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C    + +A  +F T+  +     + +YS +I G CKI  ++ A +LF+ +    + P+V
Sbjct: 325 CLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDV 384

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTYN +I G C  G++  A  L  +M  +G  PN +T+N+L+    +N+   K +ELL +
Sbjct: 385 VTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTK 444

Query: 256 MDERN 260
           + + N
Sbjct: 445 LKDHN 449



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 135/254 (53%), Gaps = 3/254 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A      M+ + + P    Y+TLI G C+ G++  A  L   M +      V T++ 
Sbjct: 225 VNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSI 284

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +CK   V+E+ N++  M+ K ++P +VTYN+L +G   +++V  A  +F+ M    
Sbjct: 285 LVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIG 344

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +  +Y+  I G CK   + EA +LF  +   +    +  Y+ LIDGLCK G++  A 
Sbjct: 345 VAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYAL 404

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G  PN++TYN ++   C +  +DKA +L   ++   + P+  T+N L+ G 
Sbjct: 405 KLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGL 464

Query: 241 IRN---NETSKVVE 251
            ++    +  KV E
Sbjct: 465 CKSGRLKDAQKVFE 478



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 130/244 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N    S LI+ F   G    +  +F ++   G   + +T  TLI G C   D+ ++
Sbjct: 99  GIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKA 158

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+ + ++L+ G +   V+Y TL +GL ++ Q + AL++   +    V  +   YNT IDG
Sbjct: 159 LHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDG 218

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           +CK+  + +A + +  +   +    +  Y+ LI GLC +G+L+ A  L   +    + P 
Sbjct: 219 VCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPT 278

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T++I++  FC +G++ +A ++F+ M  K V PN VT+N+LM G    NE +K   + +
Sbjct: 279 VYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFN 338

Query: 255 RMDE 258
            M +
Sbjct: 339 TMAQ 342



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 86/143 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L + M  + + P+   Y++LIDG C +G I  A +L   M   G   N++TYN+
Sbjct: 365 VDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNS 424

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   V++++ L +++    I+P+V TYN L +GL +  +++ A K+F+++  + 
Sbjct: 425 LLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNG 484

Query: 121 VAAETSTYNTFIDGLCKNGYIVE 143
              +  TYNT I G CK G+++ 
Sbjct: 485 YNIDVYTYNTMIKGFCKKGFVIP 507



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 35/247 (14%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           L+ Q+   P+   +  ++              L   M+ NG   N+VT + LIN + +  
Sbjct: 59  LLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLG 118

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
               S +++S +L KG  P  +T  TL                                 
Sbjct: 119 HNSLSFSVFSNILKKGYEPDAITLTTL--------------------------------- 145

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I GLC  G I +A      +  L  +L   +Y  LI+GLCK+G+ + A E+ + +   
Sbjct: 146 --IKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGK 203

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            +  +VV YN +I G C D  ++ A D + +M AK + P  VT+NTL+ G     +    
Sbjct: 204 LVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDA 263

Query: 250 VELLHRM 256
           + LLH+M
Sbjct: 264 IGLLHKM 270



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 1/156 (0%)

Query: 105 QVEHALKLFDEMQHS-DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           Q+ + +  F+ + H  +       +   +  L K  +      L R +        +   
Sbjct: 48  QLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTL 107

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           S LI+   ++G    ++ +F ++ + G  P+ +T   +I G C  G + KA      + A
Sbjct: 108 SILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLA 167

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            G   N V++ TL+ G  +  +T   +E+L R+D +
Sbjct: 168 LGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGK 203


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 139/246 (56%), Gaps = 6/246 (2%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +PNA  YS +IDG C  G  D ARELF  M   G + +V++Y +LI+G+C++   +++  
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L++EM+  G++P V T++ L   L +  +V  A +L + M        T TY T + GLC
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR------VG 190
            N  I EA +LF  ++ L C   +  Y  L+ GLC+ G ++TA EL + +          
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+V++Y+I+I G C  G+ D+A +LF +M+A GV PN +++ +L+ G  R+ +     
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875

Query: 251 ELLHRM 256
            L + M
Sbjct: 876 HLFNEM 881



 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 128/227 (56%), Gaps = 8/227 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L + M+  GV+P+   +S LID  C  G++  A EL   M   GC+ N VTY TL+
Sbjct: 692 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH---- 118
            G C    + E+  L+ +M   G  P VVTY TL  GL +   ++ AL+L  +M      
Sbjct: 752 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 811

Query: 119 --SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
             ++   +  +Y+  IDGLCK+G   EA ELF+ ++ L     + +Y+ LI G C+ GKL
Sbjct: 812 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 871

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           E A  LF  +   G+  N VTY++MIHGFC +GQ+DKA  LF  MEA
Sbjct: 872 EDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEA 916



 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 142/262 (54%), Gaps = 8/262 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   M   GV P+   Y++LI GFC +G+   A+ LF  M   G   +V T++ L
Sbjct: 656 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 715

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK   V E+  L   M+ +G  P  VTY TL  GL    ++  A +LF +MQ    
Sbjct: 716 IDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGC 775

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG------IEAYSCLIDGLCKIGK 175
             +  TY T + GLC+ G I  A EL + +     + G      + +YS +IDGLCK G+
Sbjct: 776 LPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGR 835

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + A ELF+ +  +G++PNV++Y  +IHGFC  G+++ A  LF +M  +GV  N VT++ 
Sbjct: 836 EDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSV 895

Query: 236 LMLGCIRNNETSKVVELLHRMD 257
           ++ G  +  +  K   L  +M+
Sbjct: 896 MIHGFCKEGQIDKA--LFQKME 915



 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 143/265 (53%), Gaps = 6/265 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L + M  +G+ P+   Y+TLI GFCL+G+ ++A+ LF  M   G   +V T + L
Sbjct: 475 DEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVL 534

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK   V E+  L   ++ +G    VVT  TL  GL   H++  A +LF +MQ    
Sbjct: 535 IDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGC 594

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRV------LKCELGIEAYSCLIDGLCKIGK 175
                T  T + GLC++G I  A EL + +        + C+    +YS +IDGLCK G+
Sbjct: 595 MPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR 654

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + A ELF+ +  +G++P+V++Y  +IHGFC  G+   A  LF +M   GV P+  TF+ 
Sbjct: 655 EDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSV 714

Query: 236 LMLGCIRNNETSKVVELLHRMDERN 260
           L+    +  +  +  ELL  M +R 
Sbjct: 715 LIDMLCKEGKVIEANELLEVMIQRG 739



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 142/283 (50%), Gaps = 48/283 (16%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ LL++M+ RG   +   YSTLI G C+   I  A +LF+SM   GC  + + Y TL+
Sbjct: 253 EANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 312

Query: 63  NGYCKTKDVEESLNLYSEMLS-------KGIRPTV------------------------- 90
            G C+T  +  +L+L+ EML+       K IRP V                         
Sbjct: 313 KGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEV 372

Query: 91  ----------VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
                     VTY+TL  GL   H++  A  LF  MQ      +  TY T + GLC+ G 
Sbjct: 373 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 432

Query: 141 IVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           I  A +L + +        +KC+  + +YS +IDGLCK  + + A ELF+ +   G+MP+
Sbjct: 433 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD 492

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           V++Y  +IHGFC  G+ +KA  LF +M   G+ P+  T + L+
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 535



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 141/260 (54%), Gaps = 6/260 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ LL++MIQRG   +   YSTLI G C+   I  A  LF+SM   GC  + +TY TL+
Sbjct: 72  EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 131

Query: 63  NGYCKTKDVEESLNLYSEMLSK----GI--RPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            G C+T ++  +L L+ EML+     GI  +PT+++Y+ +  GL +  + + A +LF EM
Sbjct: 132 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEM 191

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +   +  +  +Y + I G C +G   +A  LF  +  +  +  +     LID  CK GK+
Sbjct: 192 KAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKV 251

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A EL + +   G + ++VTY+ +I G C   ++ +A  LF+ M+  G  P+ + + TL
Sbjct: 252 IEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTL 311

Query: 237 MLGCIRNNETSKVVELLHRM 256
           M G  +  + +  + L   M
Sbjct: 312 MKGLCQTGKINIALHLHQEM 331



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 150/336 (44%), Gaps = 82/336 (24%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ LL++MIQRG   +   YSTLI G C+   I  A  LF+SM   GC  + +TY TL+
Sbjct: 365 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 424

Query: 63  NGYCKTKDVEESLNLYSEML---------------------------------------- 82
            G C+T ++  +L L+ EML                                        
Sbjct: 425 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEM 484

Query: 83  -SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            ++GI P V++Y TL HG     + E A  LF+EM    +  + +T +  ID LCK G +
Sbjct: 485 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKV 544

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT---- 197
           +EA +L   +    C L +   + L+ GLC   ++  A +LF  + ++G MPNVVT    
Sbjct: 545 IEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 604

Query: 198 -------------------------------------YNIMIHGFCNDGQMDKAHDLFLD 220
                                                Y+I+I G C  G+ D+A +LF +
Sbjct: 605 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 664

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           M+A GV P+ +++ +L+ G  R+ +      L + M
Sbjct: 665 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 130/254 (51%), Gaps = 6/254 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++   +RP+    S LID  C  G++  A EL   M   GC+ ++VTY+TLI G C    
Sbjct: 45  IVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHR 104

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS------DVAAE 124
           + E+  L+  M   G RP  +TY TL  GL +   +  AL+L  EM +            
Sbjct: 105 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 164

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             +Y+  IDGLCK+    EA ELF+ ++       + +Y+ LI G C  GK E A  LF 
Sbjct: 165 LISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFN 224

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +  VG+ P+V T  ++I  FC +G++ +A++L   M  +G   + VT++TL+ G    +
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH 284

Query: 245 ETSKVVELLHRMDE 258
             S+  +L   M +
Sbjct: 285 RISEATQLFMSMKK 298



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 130/249 (52%), Gaps = 7/249 (2%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P    YS +IDG C     D ARELF  M   G M +V++Y +LI+G+C +   E++  
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L++EML  GI+P V T   L     +  +V  A +L + M H     +  TY+T I GLC
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC 281

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL----PRVGLM 192
               I EA +LF +++ L C     AY  L+ GLC+ GK+  A  L Q +     + G+ 
Sbjct: 282 MKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIK 341

Query: 193 ---PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
              P+V T +++I   C +G++ +A++L   M  +G   + VT++TL+ G    +  S+ 
Sbjct: 342 CIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEA 401

Query: 250 VELLHRMDE 258
             L   M +
Sbjct: 402 TWLFMSMQK 410



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 124/249 (49%), Gaps = 6/249 (2%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           +RP+    S LID  C  G++  A EL   M   GC+ ++VTY+TLI G C    + E+ 
Sbjct: 343 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 402

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS------DVAAETSTYN 129
            L+  M   G RP  +TY TL  GL +   +  AL+L  EM +              +Y+
Sbjct: 403 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 462

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             IDGLCK+    EA ELF  ++       + +Y+ LI G C  GK E A  LF  +  V
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ P+V T +++I   C  G++ +A+ L   +  +G   + VT  TL+ G    +  SK 
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582

Query: 250 VELLHRMDE 258
            +L  +M +
Sbjct: 583 TQLFLKMQK 591



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 15/226 (6%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG---------IRPTVVTYNTL 96
           M + G   +  T+N LIN  C  K V E L   + ++ +G         IRP V T + L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
              L +  +V  A +L + M       +  TY+T I GLC    I EA  LF +++ L C
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSL----PRVGL--MPNVVTYNIMIHGFCNDGQ 210
                 Y  L+ GLC+ G +  A +L Q +     R G+   P +++Y+I+I G C D +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            D+A +LF +M+A+G+ P+ +++ +L+ G   + +  K   L + M
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEM 226



 Score = 44.3 bits (103), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN 49
           +++A  L + M+ +GV+ NA  YS +I GFC  G+ID+A  LF  M+ N
Sbjct: 871 LEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 9/106 (8%)

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI---------MIHGFCNDGQMD 212
            ++ LI+ LC + ++         + R G +P++VTY+I         +I   C +G++ 
Sbjct: 12  TFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVI 71

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +A++L   M  +G   + VT++TL+ G    +  S+   L   M +
Sbjct: 72  EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 117


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 132/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C    +D A  LF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   ++ ++++Y +ML++G  P VVTYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A EL   +      L    Y+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + + RVGL P+  TY ++++ FC  G + KA +L  +M+  G  P  VT
Sbjct: 367 KMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 138/260 (53%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ 
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSV 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++E+  L+ EML  G+ P  VT+ TL  G  +  +++ A+ ++ +M +  
Sbjct: 212 LINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYNT I GLCK G + +A  L   +     +     Y+ LIDG CK G LETA+
Sbjct: 272 FSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAF 331

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + + +  +  + V Y  +I G C +G+   A  +  +M   G+ P+  T+  +M   
Sbjct: 332 ELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEF 391

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  +  K  ELL  M +RN
Sbjct: 392 CKKGDVKKASELLREM-QRN 410



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GE+  A+ +F ++   G   +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A  LF EM  + +     T+ T IDG
Sbjct: 191 FRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A +++R +        +  Y+ LI GLCK G L+ A  L   + R GL P+
Sbjct: 251 HCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +L   M  + +  + V +  L+ G  +        ++L 
Sbjct: 311 KITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 2/260 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS +   +++ +G  R + +V+S LI  +  +G I  A E F     +       T  
Sbjct: 46  DSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++    K K  +     Y E+L  G   ++  +N L H   +  ++  A  +FD +   
Sbjct: 106 NVLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT ++G  K G + E   L   +R    +  +  YS LI+GLCK  +++ A
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF  +   GL+PN VT+  +I G C +G++D A D++  M  +G +P+ VT+NTL+ G
Sbjct: 226 NGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRMDER 259
             +  +  +   LL  M  +
Sbjct: 286 LCKKGDLKQARYLLDEMSRK 305


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 134/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A ELF  M   G + N VT+ T
Sbjct: 176 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 235

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK+  V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 236 LIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 295

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 296 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAE 355

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +   GL P+  TY ++I+ FC  G +     L  +M+  G  P+ VT+N LM G
Sbjct: 356 KVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 115/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + ++++ +   G+RP+VV++NTL +G   +  ++   +L   M 
Sbjct: 128 FNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 187

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVD 247

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AHDL  +M  KG+ P+ +T+ TL+
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 308 DGCCKEGDLETAFEHRKRMIQEN 330



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV++NTL+NGY +  D
Sbjct: 116 ILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGD 175

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 176 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 235

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK+G +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 236 LIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 295

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +        
Sbjct: 296 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAE 355

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 356 KVLREM 361


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 131/242 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A+  L  M   G+ P+  +Y+ +I GFC  G +  A  +   M   GC+ +VVTYNT
Sbjct: 313 MDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNT 372

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   + ++  L +EM  +G+ P + T+ TL HG       E AL+LFD + H  
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN+ IDG+C+ G + +A EL+  +   +       YS LID  C+ G++E A+
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +   G +PN++TYN +I G+C  G + K       M    + P+ +TFNTL+ G 
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552

Query: 241 IR 242
           I+
Sbjct: 553 IK 554



 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 143/260 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +    M QRGV P+   +S LI  F   G++D A      M   G + + V Y  
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G+C+   + E+L +  EM+  G  P VVTYNTL +GL + H++  A +L +EM+   
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG 397

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+ T I G C++G   +A +LF TL   +    + AY+ LIDG+C+ G L  A 
Sbjct: 398 VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKAN 457

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +    + PN VTY+I+I   C  GQ+++A     +M +KG  PN +T+N+++ G 
Sbjct: 458 ELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGY 517

Query: 241 IRNNETSKVVELLHRMDERN 260
            R+    K  + L +M + N
Sbjct: 518 CRSGNVKKGQQFLQKMMQDN 537



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 2/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L+D M  +G++P    +++++ G C     D+A+E+F +MD      +V ++N 
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHS 119
           LI G+C+  +VEE++  Y EM  +G+ P VV+++ L  GLF    +++HA     EM+  
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GLFSTRGKMDHAAAYLREMKGL 326

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +   Y   I G C+ G + EA  +   +  L C   +  Y+ L++GLCK  +L  A
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDA 386

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL   +   G+ P++ T+  +IHG+C DG  +KA  LF  +  + + P+ V +N+L+ G
Sbjct: 387 EELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDG 446

Query: 240 CIRNNETSKVVELLHRMDER 259
             R  + +K  EL   M  R
Sbjct: 447 MCRKGDLAKANELWDDMHAR 466



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 130/241 (53%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           NA+  + ++  +C + E D+A  +   M+      +VVT+N LI+   +  DV+ ++ L 
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M +KG++P +VT+N++  GL +  + + A ++F  M    VA +  ++N  I G C+ 
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA + ++ ++       + ++SCLI      GK++ A    + +  +GL+P+ V Y
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIY 335

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            ++I GFC  G M +A  +  +M   G  P+ VT+NTL+ G  + +      ELL+ M E
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395

Query: 259 R 259
           R
Sbjct: 396 R 396



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 134/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL+ M +RGV P+   ++TLI G+C  G  ++A +LF ++       +VV YN+LI
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+  D+ ++  L+ +M ++ I P  VTY+ L     E  QVE A    DEM      
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNL 504

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I G C++G + +  +  + +        +  ++ LI G  K   +  A+ +
Sbjct: 505 PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNV 564

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + +  + P+ VTYN++I+GF   G M++A  +F  M A G+ P+  T+ +L+ G + 
Sbjct: 565 FNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVT 624

Query: 243 NNETSKVVELLHRMDER 259
              + +  +L   M  R
Sbjct: 625 AGNSKEAFQLHDEMMHR 641



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 128/252 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  ++  M +R V P+   ++ LID     G++D A  L  SM   G    +VT+N++
Sbjct: 174 DKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSV 233

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G CK +  +++  ++  M    + P V ++N L  G   + +VE A+K + EMQ   V
Sbjct: 234 LKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGV 293

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +++  I      G +  AA   R ++ L        Y+ +I G C+ G +  A  
Sbjct: 294 TPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +  +G +P+VVTYN +++G C   ++  A +L  +M+ +GV P+  TF TL+ G  
Sbjct: 354 VRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYC 413

Query: 242 RNNETSKVVELL 253
           R+    K ++L 
Sbjct: 414 RDGNFEKALQLF 425



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 117/228 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +L D ++ + +RP+   Y++LIDG C  G++ +A EL+  M       N VTY+ L
Sbjct: 419 EKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSIL 478

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +C+   VEE+     EM+SKG  P ++TYN++  G      V+   +   +M   ++
Sbjct: 479 IDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNI 538

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T+NT I G  K   +  A  +F  +     +     Y+ +I+G  + G +E A  
Sbjct: 539 LPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGR 598

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           +F+ +   G+ P+  TY  +I+G    G   +A  L  +M  +G AP+
Sbjct: 599 VFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 85/147 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA   LD M+ +G  PN   Y+++I G+C +G + + ++    M  +  + +++T+NT
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNT 547

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K +++  + N+++ M  + ++P  VTYN + +G  E   +E A ++F +M  S 
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASG 607

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL 147
           +  +  TY + I+G    G   EA +L
Sbjct: 608 IEPDRYTYMSLINGHVTAGNSKEAFQL 634



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 85/160 (53%)

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y  +LS        T N + H   +  + + A  +  EM+   V  +  T+N  ID   +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G +  A  L  ++     + GI  ++ ++ GLCK  + + A E+F+++ +  + P+V +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +NI+I GFC  G++++A   + +M+ +GV P+ V+F+ L+
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 78/182 (42%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           + S +L+    P    ++ L     +  +   A + F  +    V    S  N  +  L 
Sbjct: 74  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALS 133

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G+   A E +R +     E+     + ++   CK  + + A  +   + +  + P+VV
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+N++I      G +D A  L   M  KG+ P  VTFN+++ G  ++    K  E+   M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 257 DE 258
           D+
Sbjct: 254 DQ 255



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 49/88 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + ++M +  V+P+A  Y+ +I+GF   G ++ A  +F  M  +G   +  TY +
Sbjct: 558 MHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMS 617

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRP 88
           LING+    + +E+  L+ EM+ +G  P
Sbjct: 618 LINGHVTAGNSKEAFQLHDEMMHRGFAP 645


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 132/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G++  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L   M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 129/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++   G   +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +   G+RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +        E   RM + N
Sbjct: 319 DGSCKEGHLETAFEYRKRMIKEN 341



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 115/238 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + +V+S LI  +  +G +  A E +     +       T   +J    K K  +     Y
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFY 124

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN VT+
Sbjct: 185 GDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L   M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 131/242 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A   L  M   G+ P+  +Y+ +I GFC  G +  A  +   M   GC+ +VVTYNT
Sbjct: 313 MDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNT 372

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   + ++  L +EM  +G+ P + T+ TL HG       E+AL+LFD +    
Sbjct: 373 LLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ IDG+C+ G + +A EL+  +   +       YS LID  C+ G++E A+
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAF 492

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                + + G +PN+ TYN +I G+C  G + K       M    V P+ +TFNTL+ G 
Sbjct: 493 GFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGY 552

Query: 241 IR 242
           I+
Sbjct: 553 IK 554



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 134/258 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +    M  R V P+   +S LI  F   GE+D A      M   G + + V Y  +I
Sbjct: 280 EAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C+   + E+L +  EM+  G  P VVTYNTL +GL + H++  A KL +EM+   V 
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+ T I G C+ G    A +LF TL   +    +  Y+ LIDG+C+ G L  A EL
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +    ++PN +TY+I+I   C  GQ++ A     +M  KG  PN  T+N+++ G  R
Sbjct: 460 WDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCR 519

Query: 243 NNETSKVVELLHRMDERN 260
           +    K  + L +M + N
Sbjct: 520 SGNVKKGQQFLQKMRQDN 537



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 138/260 (53%), Gaps = 2/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L+D M  RG++P    Y++++ G C     D+A+E+F +MD      +V ++N 
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHS 119
           LI G+C+  +V+E++  Y EM  + + P VV+++ L  GLF    +++HA     EM+  
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI-GLFSRRGEMDHAGAYLREMKGL 326

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +   Y   I G C+ G + EA  +   +    C   +  Y+ L++GLCK  +L  A
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDA 386

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L   +   G+ P++ T+  +IHG+C  G  + A  LF  +  + + P+ VT+N+L+ G
Sbjct: 387 EKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDG 446

Query: 240 CIRNNETSKVVELLHRMDER 259
             R  + +K  EL   M  R
Sbjct: 447 MCRKGDLAKANELWDDMHAR 466



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 131/240 (54%), Gaps = 2/240 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA R+ D M+  G  P+   Y+TL++G C    +  A +L   M+  G   ++ T+ T
Sbjct: 348 MSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTT 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC+  + E +L L+  +L + +RP VVTYN+L  G+     +  A +L+D+M   +
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-GIEAYSCLIDGLCKIGKLETA 179
           +     TY+  ID  C+ G  VE A  F    V K  L  I  Y+ +I G C+ G ++  
Sbjct: 468 ILPNHITYSILIDSHCEKGQ-VEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKG 526

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +  Q + +  + P+++T+N +IHG+  +  M  A ++F  ME + V P+ VT+N ++ G
Sbjct: 527 QQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIING 586



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 133/257 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL+ M +RGV P+   ++TLI G+C  G  + A +LF ++       +VVTYN+LI
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+  D+ ++  L+ +M ++ I P  +TY+ L     E  QVE A    DEM      
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I G C++G + +  +  + +R       +  ++ LI G  K   +  A+ +
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + +  + P+ VTYN++I+GF   G M  A  +F  M   G+ P+  T+ +L+ G + 
Sbjct: 565 FNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVT 624

Query: 243 NNETSKVVELLHRMDER 259
              + +  +L   M  R
Sbjct: 625 AGNSKQAFQLHDEMIHR 641



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 131/241 (54%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           NA+  + ++  +C T E D A  +   M+      +VVT+N LI+   +  DV+ ++ L 
Sbjct: 156 NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M ++G++P +VTYN++  GL +  + + A ++F  M    VA +  ++N  I G C+ 
Sbjct: 216 DSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRV 275

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA + ++ ++       + ++SCLI    + G+++ A    + +  +GL+P+ V Y
Sbjct: 276 GEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIY 335

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            ++I GFC  G M +A  +  +M   G  P+ VT+NTL+ G  + +      +LL+ M+E
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEE 395

Query: 259 R 259
           R
Sbjct: 396 R 396



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 124/252 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  ++  M +R V P+   ++ LID     G++D A  L  SM   G    +VTYN++
Sbjct: 174 DGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSV 233

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G CK +  +++  ++  M    + P V ++N L  G   + +V+ A+K + EMQH  V
Sbjct: 234 LKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYV 293

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +++  I    + G +  A    R ++ L        Y+ +I G C+ G +  A  
Sbjct: 294 TPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +   G +P+VVTYN +++G C   ++  A  L  +ME +GV P+  TF TL+ G  
Sbjct: 354 VRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYC 413

Query: 242 RNNETSKVVELL 253
           R       ++L 
Sbjct: 414 RQGNFENALQLF 425



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 116/228 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A +L D ++++ +RP+   Y++LIDG C  G++ +A EL+  M     + N +TY+ L
Sbjct: 419 ENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSIL 478

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +C+   VE++     EM+ KG  P + TYN++  G      V+   +   +M+  +V
Sbjct: 479 IDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNV 538

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T+NT I G  K   +  A  +F  +           Y+ +I+G  + G ++ A  
Sbjct: 539 FPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGR 598

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           +F+ +   G+ P+  TY  +I+G    G   +A  L  +M  +G AP+
Sbjct: 599 VFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 84/147 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A   LD M+++G  PN   Y+++I G+C +G + + ++    M  +    +++T+NT
Sbjct: 488 VEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNT 547

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K +++  + N+++ M  + +RP  VTYN + +G  E   ++ A ++F  M  S 
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSG 607

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL 147
           +  +  TY + I+G    G   +A +L
Sbjct: 608 IEPDRYTYMSLINGHVTAGNSKQAFQL 634



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 87/179 (48%)

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y  +LS        T N + H   +  + + A  +  EM+   V  +  T+N  ID   +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G +  A  L  ++     + GI  Y+ ++ GLCK  + + A E+F+++ +  + P+V +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +NI+I GFC  G++ +A   + +M+ + V P+ V+F+ L+    R  E       L  M
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 78/182 (42%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           + S +L+    P    ++ L     +  +   A + F  +    V    S  N  +  L 
Sbjct: 74  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS 133

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G+   A E +R +     E+     + ++   CK  + + A  +   + +  + P+VV
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+N++I      G +D A  L   M  +G+ P  VT+N+++ G  ++    K  E+   M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253

Query: 257 DE 258
           D+
Sbjct: 254 DQ 255



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + ++M +  VRP+A  Y+ +I+GF   G +  A  +F  M  +G   +  TY +
Sbjct: 558 MHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMS 617

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRP 88
           LING+    + +++  L+ EM+ +G  P
Sbjct: 618 LINGHVTAGNSKQAFQLHDEMIHRGFAP 645



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 59/141 (41%)

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S    +   ++  I    ++    EA E FR L   +  +   A + L+  L + G    
Sbjct: 81  SSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHL 140

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A E ++ +       N  T NIM+H +C   + D A  +  +ME + V P+ VT N L+ 
Sbjct: 141 AQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLID 200

Query: 239 GCIRNNETSKVVELLHRMDER 259
              R  +    + L+  M  R
Sbjct: 201 ARFRAGDVDAAIALVDSMANR 221


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 139/259 (53%), Gaps = 3/259 (1%)

Query: 3   EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           E  +  DL+++    G  PN  +Y+TLIDG C  GEI++A++LF  M   G + N  TY 
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+G  K    ++   +Y +M   G+ P + TYN + +   +  + + A KLFDEM+  
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRER 297

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V+    TYNT I GLC+     EA ++   ++       +  Y+ LIDG C +GKL  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L + L   GL P++VTYNI++ GFC  G    A  +  +ME +G+ P+ +T+  L+  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDT 417

Query: 240 CIRNNETSKVVELLHRMDE 258
             R +   K ++L   M+E
Sbjct: 418 FARMDNMEKAIQLRSPMEE 436



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 136/253 (53%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + + M + GV PN + Y+ +++  C  G    A +LF  M   G   N+VTYNTLI G C
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +     E+  +  +M S GI P ++TYNTL  G   + ++  AL L  +++   ++    
Sbjct: 315 REMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  + G CK G    A ++ + +     +     Y+ LID   ++  +E A +L   +
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPM 434

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL P+V TY+++IHGFC  GQM++A  LF  M AK + PN V +NT++LG  +   +
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSS 494

Query: 247 SKVVELLHRMDER 259
            + + L   M+E+
Sbjct: 495 YRALRLFREMEEK 507



 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 136/241 (56%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + + +  +I G C  GEI+++ +L V +   G   NVV Y TLI+G CK  ++E++ +L+
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM   G+     TY  L HGLF+    +   +++++MQ   V     TYN  ++  CK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G   +A +LF  +R       I  Y+ LI GLC+  K   A ++   +   G+ PN++TY
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I GFC  G++ KA  L  D++++G++P+ VT+N L+ G  +  +TS   +++  M+E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 259 R 259
           R
Sbjct: 402 R 402



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 131/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L D M +RGV  N   Y+TLI G C   + + A ++   M  +G   N++TYNTLI
Sbjct: 286 DAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLI 345

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C    + ++L+L  ++ S+G+ P++VTYN L  G  +      A K+  EM+   + 
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   ID   +   + +A +L   +  L     +  YS LI G C  G++  A  L
Sbjct: 406 PSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +    L PN V YN M+ G+C +G   +A  LF +ME K + PN  ++  ++    +
Sbjct: 466 FKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525

Query: 243 NNETSKVVELLHRM 256
             ++ +   L+ +M
Sbjct: 526 ERKSKEAEGLVEKM 539



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 118/228 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA++++D M   G+ PN   Y+TLIDGFC  G++ +A  L   +   G   ++VTYN L
Sbjct: 320 NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G+CK  D   +  +  EM  +GI+P+ +TY  L      +  +E A++L   M+   +
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGL 439

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+  I G C  G + EA+ LF+ +   K E     Y+ ++ G CK G    A  
Sbjct: 440 TPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALR 499

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LF+ +    L PNV +Y  MI   C + +  +A  L   M   G+ P+
Sbjct: 500 LFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS 547



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 1/202 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  +IN Y +++ ++ S++ ++EM+ KG  P    +N L   +          + F+E +
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  +  ++   I G C+ G I ++ +L   LR       +  Y+ LIDG CK G++E
Sbjct: 157 -IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF  + + GL+ N  TY ++IHG   +G   +  +++  M+  GV PN  T+N +M
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 238 LGCIRNNETSKVVELLHRMDER 259
               ++  T    +L   M ER
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRER 297



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 65/129 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A +L   M + G+ P+   YS LI GFC+ G+++ A  LF  M       N V YNT
Sbjct: 424 MEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNT 483

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ GYCK      +L L+ EM  K + P V +Y  +   L +  + + A  L ++M  + 
Sbjct: 484 MVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTG 543

Query: 121 VAAETSTYN 129
           +    S  N
Sbjct: 544 IDPSDSILN 552


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 132/237 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++L +M  + + P+  VY+TLI GF  +G +    +LF  M     + + VTY ++I
Sbjct: 340 EAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMI 399

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   V E+  L+SEMLSKG++P  VTY  L  G  +  +++ A  L ++M    + 
Sbjct: 400 HGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLT 459

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   +DGLCK G +  A EL   +     +  +  Y+ LI+GLCK+G +E A +L
Sbjct: 460 PNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKL 519

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +   G  P+ +TY  ++  +C  G+M KAH+L   M  KG+ P  VTFN LM G
Sbjct: 520 MEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNG 576



 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 135/251 (53%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +L++ + ++G++PN + Y+++I   C TG +  A ++   M       + V Y TLI+G+
Sbjct: 308 KLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGF 367

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K+ +V     L+ EM  K I P  VTY ++ HGL +  +V  A KLF EM    +  + 
Sbjct: 368 GKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE 427

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY   IDG CK G + EA  L   +        +  Y+ L+DGLCK G+++ A EL   
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE 487

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   GL PNV TYN +I+G C  G +++A  L  +M+  G  P+ +T+ T+M    +  E
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547

Query: 246 TSKVVELLHRM 256
            +K  ELL  M
Sbjct: 548 MAKAHELLRIM 558



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 131/237 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M+ +G++P+   Y+ LIDG+C  GE+  A  L   M   G   NVVTY  L+
Sbjct: 410 EARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALV 469

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  +V+ +  L  EM  KG++P V TYN L +GL ++  +E A+KL +EM  +   
Sbjct: 470 DGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFF 529

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TY T +D  CK G + +A EL R +     +  I  ++ L++G C  G LE    L
Sbjct: 530 PDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERL 589

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +   G+MPN  T+N ++  +C    M    +++  M A+GV P+  T+N L+ G
Sbjct: 590 IKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKG 646



 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 136/257 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M  RG  P+   YS ++DG+C   ++ +  +L   +   G   N  TYN+
Sbjct: 268 VKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNS 327

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CKT  V E+  +   M ++ I P  V Y TL  G  +   V    KLFDEM+   
Sbjct: 328 IISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKK 387

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I GLC+ G +VEA +LF  +     +     Y+ LIDG CK G+++ A+
Sbjct: 388 IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAF 447

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL PNVVTY  ++ G C  G++D A++L  +M  KG+ PN  T+N L+ G 
Sbjct: 448 SLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGL 507

Query: 241 IRNNETSKVVELLHRMD 257
            +     + V+L+  MD
Sbjct: 508 CKVGNIEQAVKLMEEMD 524



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  L + M+++G+ PN   Y+ L+DG C  GE+D A EL   M   G   NV TYN 
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  ++E+++ L  EM   G  P  +TY T+     ++ ++  A +L   M    
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+N  ++G C +G + +   L + +           ++ L+   C    +    
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATI 622

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+++ +   G++P+  TYNI+I G C    M +A  L  +M  KG +    ++N+L+ G 
Sbjct: 623 EIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGF 682

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  +L   M
Sbjct: 683 YKRKKFEEARKLFEEM 698



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 114/225 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ LL  M ++G++PN   Y+ LI+G C  G I++A +L   MD+ G   + +TY T
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++ YCK  ++ ++  L   ML KG++PT+VT+N L +G      +E   +L   M    
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +T+N+ +   C    +    E+++ +           Y+ LI G CK   ++ AW
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            L + +   G      +YN +I GF    + ++A  LF +M   G
Sbjct: 658 FLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 107/217 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +L++ M   G  P+   Y+T++D +C  GE+ +A EL   M   G    +VT+N 
Sbjct: 513 IEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNV 572

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C +  +E+   L   ML KGI P   T+N+L       + +   ++++  M    
Sbjct: 573 LMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQG 632

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +T+TYN  I G CK   + EA  L + +      L   +Y+ LI G  K  K E A 
Sbjct: 633 VVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEAR 692

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           +LF+ +   G +     Y+I +     +G  +   +L
Sbjct: 693 KLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 1/189 (0%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E+  L+ ++L+ G+  +V + N     L      +  A ++F E     V   T +YN  
Sbjct: 199 EAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNII 258

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           +  LC+ G + EA  L   +        + +YS ++DG C++ +L    +L + L R GL
Sbjct: 259 LHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGL 318

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PN  TYN +I   C  G++ +A  +   M+ + + P+ V + TL+ G  ++   S   +
Sbjct: 319 KPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYK 378

Query: 252 LLHRMDERN 260
           L   M  + 
Sbjct: 379 LFDEMKRKK 387



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-------RVLKCELGIEAYSCLIDGL 170
           + D  A    ++ F   L + G ++EA +LF  L        V  C L +   S   DG+
Sbjct: 174 YKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGI 233

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
                  TA+ +F+    VG+  N V+YNI++H  C  G++ +AH L + ME +G  P+ 
Sbjct: 234 ------RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDV 287

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDER 259
           V+++ ++ G  +  +  KV++L+  +  +
Sbjct: 288 VSYSVIVDGYCQVEQLGKVLKLMEELQRK 316



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 10/175 (5%)

Query: 70  DVEESLNLYSEML-----SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           DV  S + ++E L       G  P V  ++  F  L E   +  A KLFD++ +  V   
Sbjct: 158 DVGNSFDRFTERLIYTYKDWGAHPLV--FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVS 215

Query: 125 TSTYNTFIDGLCKNGY--IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + N F+  L  N +  I  A  +FR    +       +Y+ ++  LC++GK++ A  L
Sbjct: 216 VDSCNLFLARL-SNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSL 274

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              +   G +P+VV+Y++++ G+C   Q+ K   L  +++ KG+ PN  T+N+++
Sbjct: 275 LIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSII 329



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 47/105 (44%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  +GV P+   Y+ LI G C    +  A  L   M   G      +YN+LI G+ K K 
Sbjct: 628 MHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKK 687

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
            EE+  L+ EM + G       Y+      +E    E+ L+L DE
Sbjct: 688 FEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 127/235 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL   + +G  PN  VY+ LIDG+C TG+++ A ++F  M   GC+ NV TY  LI
Sbjct: 197 EAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLI 256

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK+  VE ++ LYS M+  G+ P VVTY TL  G      +EHA +L   M+   +A
Sbjct: 257 CGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLA 316

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T    ID LCK+G I EA +   +L     ++    Y+ +ID LCK GK + A  L
Sbjct: 317 PNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNL 376

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            Q +   G +P+   Y+ +I G C + ++ +A  L  DM   GV  N V F  L+
Sbjct: 377 MQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILI 431



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 4/258 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M   G  P++ VYS ++ G C  G    A  L       G + NV  YN LI
Sbjct: 162 EAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALI 221

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC T D+E +++++  M SKG  P V TY  L  G  +  +VE A+ L+  M  + +A
Sbjct: 222 DGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLA 281

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAW 180
               TY T I G C  G++  A  L  ++    C L    ++C  LID LCK G++E A 
Sbjct: 282 PNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA--CGLAPNEWTCLVLIDALCKHGRIEEAQ 339

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +   SL + G+  N V Y  MI   C  G+ D AH+L   +  +G  P+   +++L+ G 
Sbjct: 340 QFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGL 399

Query: 241 IRNNETSKVVELLHRMDE 258
            R N+  + + LL+ M E
Sbjct: 400 CRENKLLEAISLLNDMIE 417



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 115/229 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A R L  +++ G+ P++  Y++ + G+C TG    A  LF+ M   GC     TY  
Sbjct: 90  LPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAA 149

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C    V E++ +++ M   G  P    Y+ + HGL    +   A+ L  +     
Sbjct: 150 LLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKG 209

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                + YN  IDG C  G +  A ++F+ ++   C   +  Y+ LI G CK GK+E A 
Sbjct: 210 FVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAM 269

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L+  +   GL PNVVTY  +I G C++G ++ A  L   MEA G+APN
Sbjct: 270 VLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPN 318



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 112/239 (46%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   Y+TLI+ +C  G++  A+    S+   G   +   Y + + GYC+T     +  L+
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M  +G   T  TY  L  GL     V  A+ +F  M     A ++  Y+  + GLC  
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G   EA  L            +  Y+ LIDG C  G LE A ++F+ +   G +PNV TY
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
             +I GFC  G++++A  L+  M   G+APN VT+ TL+ G            LLH M+
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME 311



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 8/243 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   MI+ G+ PN   Y+TLI G C  G ++ A  L  SM+  G   N  T   
Sbjct: 265 VERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLV 324

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   +EE+      ++ KGI+   V Y ++   L +  + + A  L  ++    
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
              +   Y++ IDGLC+   ++EA  L   +     E G++A    ++ LID   +  + 
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDM----IESGVQANAVPFTILIDKHLREFRS 440

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           ++   +   +   G+ P+VVTY + I  +C DG+M+ A  + + M   GV PN  T+NTL
Sbjct: 441 DSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTL 500

Query: 237 MLG 239
           + G
Sbjct: 501 IKG 503



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 96/207 (46%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           + N+ TY TLIN YC   D+  +    S +L  G+ P    Y +   G        HA +
Sbjct: 71  VRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACR 130

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           LF  M     A    TY   + GLC  G + EA  +F  +    C      YS ++ GLC
Sbjct: 131 LFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLC 190

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             G+   A  L       G +PNV  YN +I G+C+ G ++ A D+F  M++KG  PN  
Sbjct: 191 GAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVR 250

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDE 258
           T+  L+ G  ++ +  + + L  RM E
Sbjct: 251 TYTQLICGFCKSGKVERAMVLYSRMIE 277



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 16/275 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  L+  +I  G  P+A +YS+LIDG C   ++  A  L   M  +G   N V +  L
Sbjct: 371 DGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTIL 430

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ + +    +    +   M + G++P VVTY        +  ++E A  +  +M    V
Sbjct: 431 IDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGV 490

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID------------- 168
               +TYNT I G    G + +A    + +    C+   E+Y+ L+              
Sbjct: 491 RPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVA 550

Query: 169 ---GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
               L KI  ++   EL + + ++        Y+  I       ++++A    + M++  
Sbjct: 551 DSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSAN 610

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + P+   +  ++  C R     + +  L  M +RN
Sbjct: 611 LTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRN 645



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 19/260 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  ++  MI  GVRPN   Y+TLI G+   G + +A     +M  NGC  N  +Y  
Sbjct: 475 MEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTV 534

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+    K        N Y ++++  I             L++I  ++   +L +E+    
Sbjct: 535 LLGLLLKK-------NSYHDLVADSI------------SLWKIVDMKVLEELLEEVIKLQ 575

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            ++ +  Y+ FI  L K   + EA      ++        + Y+C+I+   ++  L+ A 
Sbjct: 576 CSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEAL 635

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
               S+ +   +P + +Y  +I   C +G    A  +F D+ +K    + + +  L+ G 
Sbjct: 636 RFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGL 695

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++   T+    LL  M+E+N
Sbjct: 696 LQKGNTADCSRLLSFMEEQN 715


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 134/254 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            AS + D  +  GV PN   Y  LI+GFC  G+I+ A  L   M + G  HN + +NT+I
Sbjct: 271 RASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMI 330

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   VE++L + + M   GI   + TYNTL  GL  ++++E A KL   M    VA
Sbjct: 331 DGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVA 390

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               +Y T I    K G +VEA  LFR +        +  Y+ +IDG  K G +  A   
Sbjct: 391 PNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERF 450

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + GL+P++ TY  ++HG C +G++D A  LF +M+ +G  PN V +  L+ G  +
Sbjct: 451 KKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAK 510

Query: 243 NNETSKVVELLHRM 256
              + +  +L   M
Sbjct: 511 EGRSEEAFQLYDDM 524



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 131/259 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D  + LL  M  RGV P    Y+ L+DG    G+I +   ++  M       +V  Y+ +
Sbjct: 200 DAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAV 259

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN YC+  +V  +  ++ E +  G+ P   TY  L +G  +I Q+E A  L  +MQ   V
Sbjct: 260 INAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGV 319

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 +NT IDG C++G + +A E+   +  +  EL I  Y+ L  GLC++ ++E A +
Sbjct: 320 GHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKK 379

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G+ PN V+Y  +I     +G M +A  LF DME KG  P+ VT+N ++ G I
Sbjct: 380 LLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYI 439

Query: 242 RNNETSKVVELLHRMDERN 260
           +N    +       M+++ 
Sbjct: 440 KNGSIREAERFKKEMEKKG 458



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 109/212 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +  +M + G+  + + Y+TL  G C    ++ A++L   M   G   N V+Y T
Sbjct: 339 VEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTT 398

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + K  D+ E+  L+ +M  KG RP+VVTYN +  G  +   +  A +   EM+   
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKG 458

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   + G C NG +  A  LF  ++    +  + AY+ L+ GL K G+ E A+
Sbjct: 459 LVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAF 518

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           +L+  +   GL P+   Y++++     D + D
Sbjct: 519 QLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 3/258 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNV--VTYNT 60
            A+  LD  + R  R +    ++ +      G++  A +L     I  C  +V  ++ + 
Sbjct: 95  RAAEALDATVSRLGRLDPRSLTSSLLSLRRAGQLPAAADLL-GKAIASCPASVTPLSASV 153

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G+CK+  V+++  L  E+   G+      YN+L          +    L  EM++  
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   +DGL + G I +   ++  ++       +  YS +I+  C+ G +  A 
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F      G+ PN  TY  +I+GFC  GQ++ A  L  DM+ +GV  N + FNT++ G 
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333

Query: 241 IRNNETSKVVELLHRMDE 258
            R+    K +E+   M++
Sbjct: 334 CRHGMVEKALEIKAVMEK 351



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 139 GYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           G +  AA+L     +  C   +   + S ++DG CK G ++ A  L   LPR G+  N  
Sbjct: 126 GQLPAAADLLGKA-IASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNAC 184

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            YN ++  +      D    L  +ME +GV P   T+  L+ G  R  + SKV  +   M
Sbjct: 185 CYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEM 244

Query: 257 DERN 260
             +N
Sbjct: 245 KRKN 248


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 135/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A ELF  M   G + N VT+ T
Sbjct: 191 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 250

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM+   
Sbjct: 251 LIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKG 310

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 311 LKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAE 370

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G +     L  +M+  G  P+ VT+N LM G
Sbjct: 371 KMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  +L+++  +   G+RP+VV++NTL +G   +  ++   +L   M 
Sbjct: 143 FNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 202

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 262

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +++ TL+
Sbjct: 263 LAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLI 322

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 323 DGCCKEGDLETAFEHRKRMIQEN 345



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A  +F ++   G   +VV++NTL+NGY +  D
Sbjct: 131 ILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGD 190

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 191 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 250

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 251 LIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKG 310

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ ++Y  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    
Sbjct: 311 LKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAE 370

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 371 KMLREM 376



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 119/247 (48%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           L  Q   R + +V+S LI  +  +G +  A E +     +       T   ++    K K
Sbjct: 60  LETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 119

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
             +     Y E+L  G   ++  +N L H   +   +  AL +FD +    +     ++N
Sbjct: 120 YFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFN 179

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T ++G  + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   
Sbjct: 180 TLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK 239

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           GL+PN VT+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  + 
Sbjct: 240 GLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 299

Query: 250 VELLHRM 256
            +L+  M
Sbjct: 300 QDLIDEM 306


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 135/258 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D   R    MI  G +P  F Y+ +ID  C  G+I+ A  LF  M   G + + VTYN++
Sbjct: 115 DGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSM 174

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K   +++++  + EM S    P V+TYNTL +   +  ++   L+ F EM+ S +
Sbjct: 175 IDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGL 234

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                +Y+T +D  CK   + +A + +  +R L        Y+ L+D  CKIG L  A+ 
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFR 294

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + +VG+  NVVTY  +I G C+  ++ +A +LF  M   GV PN  ++  L+ G +
Sbjct: 295 LADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFV 354

Query: 242 RNNETSKVVELLHRMDER 259
           +     + +ELL  M  R
Sbjct: 355 KAKNMDRALELLDEMKGR 372



 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 143/261 (54%), Gaps = 4/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ AS L + M  RG+ P+   Y+++IDG+   G +D     F  M    C  +V+TYNT
Sbjct: 149 IEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNT 208

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +CK   + + L  + EM   G++P VV+Y+TL     +   ++ ALK + +M+   
Sbjct: 209 LINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG 268

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + +D  CK G + +A  L   +  +  E  +  Y+ LIDGLC + +++ A 
Sbjct: 269 LVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAE 328

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM--L 238
           ELF  +   G++PN+ +Y  +IHGF     MD+A +L  +M+ +G+ P+ + + T +  L
Sbjct: 329 ELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSL 388

Query: 239 GCIRNNETSKVVELLHRMDER 259
             +   E +KVV  ++ M E+
Sbjct: 389 CGLEKIEAAKVV--MNEMQEK 407



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 127/259 (49%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL D M Q GV  N   Y+ LIDG C    I  A ELF  M   G + N+ +Y  
Sbjct: 289 LSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTA 348

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K K+++ +L L  EM  +GI+P ++ Y T    L  + ++E A  + +EMQ   
Sbjct: 349 LIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKG 408

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A T  Y T +D   K+    E   L   +  L  E+    +  LIDGLCK   +  A 
Sbjct: 409 IKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAI 468

Query: 181 ELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + F  +    GL  N   Y  MI G C + Q++ A  LF  M  KG+ P+   + +L+ G
Sbjct: 469 DYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDG 528

Query: 240 CIRNNETSKVVELLHRMDE 258
            ++     + + L  +M E
Sbjct: 529 KLKQGNVVQALALRDKMAE 547



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 118/247 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+     + M      P+   Y+TLI+ FC  G++ +  E F  M  +G   NVV+Y+T
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +CK   ++++L  Y +M   G+ P   TY +L     +I  +  A +L DEM    
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   IDGLC    I EA ELF  +        + +Y+ LI G  K   ++ A 
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G+ P+++ Y   I   C   +++ A  +  +M+ KG+  N   + TLM   
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAY 423

Query: 241 IRNNETS 247
            ++   S
Sbjct: 424 FKSENPS 430



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 102/200 (51%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L++ + +    +     + +M+  G +PTV TYN +   + +   +E A  LF+EM+ 
Sbjct: 102 NGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKF 161

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +  +T TYN+ IDG  K G + +    F  ++ + CE  +  Y+ LI+  CK GKL  
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPK 221

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             E F+ + + GL PNVV+Y+ ++  FC +  M +A   ++DM   G+ PN  T+ +L+ 
Sbjct: 222 GLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVD 281

Query: 239 GCIRNNETSKVVELLHRMDE 258
              +    S    L   M +
Sbjct: 282 AYCKIGNLSDAFRLADEMSQ 301



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 114/246 (46%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M Q G++PN   YSTL+D FC    + +A + +V M   G + N  TY +L++ YCK  +
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGN 288

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + ++  L  EM   G+   VVTY  L  GL ++ +++ A +LF +M  + V    ++Y  
Sbjct: 289 LSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTA 348

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G  K   +  A EL   ++    +  +  Y   I  LC + K+E A  +   +   G
Sbjct: 349 LIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKG 408

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           +  N   Y  ++  +       +   L  +M    +    VTF  L+ G  +N   SK +
Sbjct: 409 IKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAI 468

Query: 251 ELLHRM 256
           +   R+
Sbjct: 469 DYFGRI 474



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 94/189 (49%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C+     ++ L +   +    EE+L  +S+M    + P   + N L H    + + + 
Sbjct: 57  NVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDG 116

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
             + F +M  +       TYN  ID +CK G I  A+ LF  ++          Y+ +ID
Sbjct: 117 MKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMID 176

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  K+G+L+     F+ +  +   P+V+TYN +I+ FC  G++ K  + F +M+  G+ P
Sbjct: 177 GYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKP 236

Query: 229 NCVTFNTLM 237
           N V+++TL+
Sbjct: 237 NVVSYSTLV 245



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 41/208 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  LLD M  RG++P+  +Y T I   C   +I+ A+ +   M   G   N   Y T
Sbjct: 359 MDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTT 418

Query: 61  L-----------------------------------INGYCKTKDVEESLNLYSEMLSK- 84
           L                                   I+G CK K V ++++ +  + +  
Sbjct: 419 LMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDF 478

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G++     Y  +  GL +  QVE A  LF++M    +  + + Y + IDG  K G +V+A
Sbjct: 479 GLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQA 538

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCK 172
                 LR    E+G+E+ +   D LC+
Sbjct: 539 L----ALRDKMAEIGVESGARFGD-LCQ 561


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 128/248 (51%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           + G+ P    Y+ LIDG+C  G+++ AR L   M    C+ +V TY  L+NG C  +++ 
Sbjct: 398 RAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLA 457

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
                + EMLSKG+ P    YNT       I  + +A +L +EM    ++++T TYN  I
Sbjct: 458 MVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLI 517

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           DGLCK G + +A  L+  +      L    Y+CLI   C+ G+L  A  +F  +   GL 
Sbjct: 518 DGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLS 577

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P+VVTY I IH +C  G +  A+  F  M  +GV PN VT+N LM    R   T    + 
Sbjct: 578 PSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQH 637

Query: 253 LHRMDERN 260
            H M ER 
Sbjct: 638 FHEMLERG 645



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 136/274 (49%), Gaps = 41/274 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN--GCMHNVVTYNTLINGYCKT 68
           M+Q GV P+ F Y+TL+D FC  G +D+A  L   M+    GC+ N VTYN +ING  + 
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279

Query: 69  KDVEESLNLYS----------------------------------EMLSKGIRPTVVTYN 94
            ++E++  L                                    EM ++GI PTVVTYN
Sbjct: 280 GELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYN 339

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           TL  GLF+    E A   FDEM+   +  +  TYN+ I+G CK G + +A  LF  L+  
Sbjct: 340 TLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRA 399

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                +  Y+ LIDG C++G LE A  L + +     +P+V TY I+++G C    +   
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMV 459

Query: 215 HDLFLDMEAKGVAPNCVTFNT-----LMLGCIRN 243
              F +M +KG+ P+C  +NT     L +G I N
Sbjct: 460 RIFFDEMLSKGLEPDCFAYNTRISAELTIGAITN 493



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 120/233 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
             D M+ +G+ P+ F Y+T I      G I  A +L   M + G   + VTYN LI+G C
Sbjct: 462 FFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLC 521

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           KT  ++++  L+ +M++ G+R   VTY  L H   E  ++  A  +FD M  S ++    
Sbjct: 522 KTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVV 581

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY  FI   C+ G +  A   FR +     E     Y+ L+  LC++G+ E+A++ F  +
Sbjct: 582 TYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEM 641

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              GL+PN  TY ++I G C +G    A  L+ +M  KG+ P+  T N L  G
Sbjct: 642 LERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKG 694



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 130/256 (50%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A++L+D+M +   + +AF Y+ LI G      +++A  L + M+  G +  VVTYNT
Sbjct: 282 LEKAAQLVDIM-RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNT 340

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  KT + E +   + EM +KG+ P ++TYN+L +G  +   ++ AL LF +++ + 
Sbjct: 341 LIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAG 400

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  IDG C+ G +  A  L   +    C   +  Y+ L++G C +  L    
Sbjct: 401 LGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVR 460

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +   GL P+   YN  I      G +  A  L  +M  +G++ + VT+N L+ G 
Sbjct: 461 IFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGL 520

Query: 241 IRNNETSKVVELLHRM 256
            +         L  +M
Sbjct: 521 CKTGSLKDAYVLWMKM 536



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 3/226 (1%)

Query: 37  DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK--GIRPTVVTYN 94
           D  R ++  M   G   ++ TYNTL++ +CK   +++++ L  +M ++  G  P  VTYN
Sbjct: 211 DDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYN 270

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + +GL    ++E A +L D M+ S   A   TYN  I GL    ++ +A  L   +   
Sbjct: 271 VVINGLARKGELEKAAQLVDIMRLSK-KASAFTYNPLITGLLARDFVEKAGALLLEMENE 329

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                +  Y+ LIDGL K G  E A   F  +   GL+P+++TYN +I+G+C  G + +A
Sbjct: 330 GIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQA 389

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             LF D++  G+ P  +T+N L+ G  R  +      L   M E +
Sbjct: 390 LCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEED 435



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 1/211 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L + M+ RG+  +   Y+ LIDG C TG +  A  L++ M  +G   + VTY  LI+
Sbjct: 494 AFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIH 553

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +C+   + E+ N++  M++ G+ P+VVTY    H       +  A   F +M    V  
Sbjct: 554 AHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEP 613

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  +  LC+ G    A + F  +           Y+ LIDG CK G    A  L+
Sbjct: 614 NEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLY 673

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             + + G+ P+  T+N +  GF  +G M  A
Sbjct: 674 CEMHQKGIHPDHCTHNALFKGF-GEGHMYDA 703



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 5/181 (2%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           + L+ + EM   G+ P V   N +   L +  + +    ++ +M    V     TYNT +
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 133 DGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           D  CK G + +A  L + +  R   C      Y+ +I+GL + G+LE A +L   + R+ 
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLS 295

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR--NNETSK 248
              +  TYN +I G      ++KA  L L+ME +G+ P  VT+NTL+ G  +  N E ++
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355

Query: 249 V 249
           V
Sbjct: 356 V 356



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 1/144 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + D M+  G+ P+   Y+  I  +C  G +  A   F  M   G   N VTYN L+
Sbjct: 563 EAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLM 622

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  C+    E +   + EML +G+ P   TY  L  G  +     HA++L+ EM    + 
Sbjct: 623 HALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIH 682

Query: 123 AETSTYNTFIDGLCKNGYIVEAAE 146
            +  T+N    G    G++ +A +
Sbjct: 683 PDHCTHNALFKGF-GEGHMYDAVQ 705



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           +C++  L    + +    ++  + ++G+ P++ TYN ++  FC  G+MD+A  L  DMEA
Sbjct: 198 NCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEA 257

Query: 224 K--GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +  G  PN VT+N ++ G  R  E  K  +L+  M
Sbjct: 258 RAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM 292



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 36/77 (46%)

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ + R G+ P V   N ++    +  + D    ++ DM   GV P+  T+NTL+    +
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 243 NNETSKVVELLHRMDER 259
                + V LL  M+ R
Sbjct: 242 AGRMDQAVALLKDMEAR 258


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 141/263 (53%), Gaps = 38/263 (14%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L + MIQ  + PN F Y++LI+G C+ G +D AR++F  M+  GC  +VV Y +LI
Sbjct: 264 DAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLI 323

Query: 63  NGYCKTKDVEESLNLYSEM-----------------------------------LSKGIR 87
           NG+CK K VE+++ ++ EM                                   +S+G+ 
Sbjct: 324 NGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVP 383

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD---VAAETSTYNTFIDGLCKNGYIVEA 144
           P + TYN L H L    +V  AL +F++MQ  +   V     TYN  + GLC NG + +A
Sbjct: 384 PNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKA 443

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             +F  ++    ++GI  Y+ +I G+CK GK++ A  LF SLP  G+ PNVVTY  MI G
Sbjct: 444 LMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISG 503

Query: 205 FCNDGQMDKAHDLFLDMEAKGVA 227
              +G M +AH LF  M+  GV+
Sbjct: 504 LFREGLMLEAHVLFRKMKEDGVS 526



 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +++ M++ G++P+  +Y+T+ID  C  G +D A  LF  M+  G   +VV Y +
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG C +    ++  L   M+ + I+P V+T+N L     +  ++  A +L++EM    
Sbjct: 217 LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMS 276

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TY + I+GLC  G + EA ++F  +    C   + AY+ LI+G CK  K+E A 
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAM 336

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  + + GL  N +TY  +I GF   G+ + A ++F  M ++GV PN  T+N L+   
Sbjct: 337 KIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCL 396

Query: 241 IRNNETSKVVELLHRMDER 259
             N + +K + +   M +R
Sbjct: 397 CYNGKVNKALMIFEDMQKR 415



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 130/236 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS  L  +++ G  P+ F +++LI+GFCL   I+ A  +   M   G   +VV Y T+I+
Sbjct: 125 ASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIID 184

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK   V+ +L+L+++M + GIRP VV Y +L +GL    +   A  L   M    +  
Sbjct: 185 SLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKP 244

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+N  ID   K G +++A EL+  +  +     I  Y+ LI+GLC  G+L+ A ++F
Sbjct: 245 DVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMF 304

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   G  P+VV Y  +I+GFC   +++ A  +F +M  KG+  N +T+ TL+ G
Sbjct: 305 YLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQG 360



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 136/245 (55%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  + +  + L++ FC + +   A      +   G   ++ T+ +LING+C    +EE+
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           +++ ++M+  GI+P VV Y T+   L +   V++AL LF++M++  +  +   Y + ++G
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC +G   +A  L R +   K +  +  ++ LID   K GKL  A EL+  + ++ + PN
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPN 280

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           + TY  +I+G C +G++D+A  +F  ME KG  P+ V + +L+ G  +  +    +++ +
Sbjct: 281 IFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFY 340

Query: 255 RMDER 259
            M ++
Sbjct: 341 EMSQK 345



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 101/222 (45%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           + + A +LF  M  +  + +++ +  L+N   K K  +  +NL   +   G+   + T N
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            L +   +  Q   A     ++       +  T+ + I+G C    I EA  +   +  +
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             +  +  Y+ +ID LCK G ++ A  LF  +   G+ P+VV Y  +++G CN G+   A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             L   M  + + P+ +TFN L+   ++  +     EL + M
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEM 272



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 90/187 (48%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E+L+L+S M+     P+++ +  L + + ++ + +  + L   +Q   V+ +  T N  +
Sbjct: 54  EALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLM 113

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           +  C++     A+     L  L  E  I  ++ LI+G C   ++E A  +   +  +G+ 
Sbjct: 114 NCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIK 173

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P+VV Y  +I   C +G +D A  LF  ME  G+ P+ V + +L+ G   +        L
Sbjct: 174 PDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLL 233

Query: 253 LHRMDER 259
           L  M +R
Sbjct: 234 LRGMMKR 240


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 146/260 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LLD M ++GV PN   Y+TLI G      +D A +LF +M+  G      TY  
Sbjct: 385 INEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYIL 444

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + K+    ++L  + +M ++GI P +V  N   + L E+ ++  A  +F+E++ S 
Sbjct: 445 LIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSG 504

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A ++ TYN  +    K G + EA +L   +  ++CE  +   + LID L K G++E AW
Sbjct: 505 LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAW 564

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +  + L P VVTYNI++ G   +GQ+ KA  LF  M   G +PN +TFNTL+   
Sbjct: 565 QMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCL 624

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N+E    +++ ++M   N
Sbjct: 625 CKNDEVDLALKMFYKMTTMN 644



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 135/245 (55%)

Query: 15   GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
            GV+P   VY+ LIDGF     ++ A  LF  M   GC  +  TYN+LI+ + K+  + E 
Sbjct: 785  GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINEL 844

Query: 75   LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             +LY EML++G +P  +TYN +   L + ++++ A+ L+  +   D +    T+   IDG
Sbjct: 845  FDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDG 904

Query: 135  LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            L K+G + +A E+F  +    C      Y+ L++G  K+G ++TA E F+ + + G+ P+
Sbjct: 905  LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPD 964

Query: 195  VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            + +Y I++   C  G++D A   F  ++  G+ P+ V +N ++ G  R+  T + + L H
Sbjct: 965  LKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFH 1024

Query: 255  RMDER 259
             M  R
Sbjct: 1025 EMQNR 1029



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 133/235 (56%)

Query: 4    ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
            A  L + M   G  P+ F Y++LID    +G+I+   +L+  M   GC  N +TYN +I+
Sbjct: 809  AWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVIS 868

Query: 64   GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
               K+  ++++++LY  ++S    PT  T+  L  GL +  +++ A ++FD M H     
Sbjct: 869  NLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRP 928

Query: 124  ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             ++ YN  ++G  K G++  A E F+ +        +++Y+ L+D LC  G+++ A   F
Sbjct: 929  NSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYF 988

Query: 184  QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            + L + GL P++V YN+MI+G     + ++A  LF +M+ +G+ P+  T+N+L+L
Sbjct: 989  EKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLIL 1043



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M   GV P A+ Y  LID    +G   +A E F  M   G   N+V  N 
Sbjct: 420 LDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNA 479

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +    +   + E+  +++E+ S G+ P  VTYN +     ++ QV+ A+KL  EM    
Sbjct: 480 SLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ 539

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +    N+ ID L K G + EA ++F  +  +     +  Y+ L+ GL K G+++ A 
Sbjct: 540 CEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAV 599

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+S+   G  PN +T+N ++   C + ++D A  +F  M      P+ +TFNT++ G 
Sbjct: 600 QLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGF 659

Query: 241 IRNNETSKVVELLHRMDE 258
           I+ N+    + L H+M +
Sbjct: 660 IKQNQIKNAIWLFHQMKK 677



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 130/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M     +P+   Y TL+D F   G +D+  +++  M+ +G   +VVT+  
Sbjct: 315 LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK   + E+ +L   M  +G+ P + TYNTL  GL   ++++ AL LF  M+   
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   ID   K+G+  +A E F  ++       I A +  +  L ++G+L  A 
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAK 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  L   GL P+ VTYN+M+  +   GQ+D+A  L  +M      P+ +  N+L+   
Sbjct: 495 AMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL 554

Query: 241 IRNNETSKVVELLHRMDERN 260
            +     +  ++  RM+E N
Sbjct: 555 YKAGRVEEAWQMFCRMEEMN 574



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 121/229 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+ M   G+RPN + Y+  I      G+ID A  +   MD +GC  +VVTY  LI+  C
Sbjct: 251 LLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALC 310

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             + +++++ L+++M S   +P  VTY TL     +   ++   K++ EM+    A +  
Sbjct: 311 TARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVV 370

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+   ++ LCK G I EA +L  T+R       +  Y+ LI GL +  +L+ A +LF ++
Sbjct: 371 TFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
             +G+ P   TY ++I      G   KA + F  M+A+G+APN V  N 
Sbjct: 431 ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNA 479



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 129/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R++  M   G  P+   Y+ LID  C   ++D A  LF  M  +    + VTY T
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +     +++   +++EM + G  P VVT+  L + L +  ++  A  L D M+   
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYNT I GL +   + +A +LF  +  L  E     Y  LID   K G    A 
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E F+ +   G+ PN+V  N  ++     G++ +A  +F ++++ G+AP+ VT+N +M   
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCY 519

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +  + ++LL  M +
Sbjct: 520 SKVGQVDEAIKLLSEMSK 537



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 126/243 (51%), Gaps = 1/243 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    + M  RG+ PN    +  +      G +  A+ +F  +  +G   + VTYN ++
Sbjct: 457 KALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMM 516

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             Y K   V+E++ L SEM      P V+  N+L   L++  +VE A ++F  M+  ++A
Sbjct: 517 KCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLA 576

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  + GL K G I +A +LF ++    C      ++ L+D LCK  +++ A ++
Sbjct: 577 PTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKM 636

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +  +   P+V+T+N +IHGF    Q+  A  LF  M+ K + P+ VT  TL+ G I+
Sbjct: 637 FYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIK 695

Query: 243 NNE 245
           + +
Sbjct: 696 SGQ 698



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 118/236 (50%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D+A  L   ++     P    +  LIDG   +G +D A E+F  M   GC  N   YN 
Sbjct: 876  LDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNI 935

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L+NGY K   V+ +   +  M+ +GIRP + +Y  L   L    +V+ AL  F++++ + 
Sbjct: 936  LVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG 995

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  +   YN  I+GL ++    EA  LF  ++       +  Y+ LI  L  +G +E A 
Sbjct: 996  LDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAG 1055

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            ++++ L  +GL PNV TYN +I G+   G  + A+ ++  M   G  PN  TF  L
Sbjct: 1056 KIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 112/214 (52%), Gaps = 1/214 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + +   G+ P++  Y+ ++  +   G++D A +L   M    C  +V+  N+
Sbjct: 490 LGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINS 549

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K   VEE+  ++  M    + PTVVTYN L  GL +  Q++ A++LF+ M    
Sbjct: 550 LIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHG 609

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  T T+NT +D LCKN  +  A ++F  +  + C   +  ++ +I G  K  +++ A 
Sbjct: 610 CSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAI 669

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            LF  + ++ L P+ VT   ++ G    GQ++ A
Sbjct: 670 WLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDA 702



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 145/298 (48%), Gaps = 47/298 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++   M +  + P    Y+ L+ G    G+I +A +LF SM+ +GC  N +T+NT
Sbjct: 560 VEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNT 619

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK  +V+ +L ++ +M +   RP V+T+NT+ HG  + +Q+++A+ LF +M+   
Sbjct: 620 LLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL- 678

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI-------------------- 160
           +  +  T  T + G+ K+G I +A   FR       ++G                     
Sbjct: 679 LRPDHVTLCTLLPGVIKSGQIEDA---FRITEDFFYQVGSNIDRSFWEDVMGGILTEAGT 735

Query: 161 -------EAYSC------------LIDGLCKIGKLETAWELFQSLPR-VGLMPNVVTYNI 200
                  E   C            +I  LCK  K   A  +F    + +G+ P +  YN+
Sbjct: 736 EKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNL 795

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +I GF     ++ A +LF +M++ G AP+  T+N+L+     + ++ K+ EL    DE
Sbjct: 796 LIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDA---HGKSGKINELFDLYDE 850



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 128/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++ + + DLM ++ +R N   Y  +     + G + +A      M   G + N  +YN 
Sbjct: 140 VEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNG 199

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   ++   +E+L +Y  M+S+G++P++ T++ L     +   ++  + L +EM+   
Sbjct: 200 LIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I  L ++G I EA  + + +    C   +  Y+ LID LC   KL+ A 
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAM 319

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +      P+ VTY  ++  F + G +DK   ++ +MEA G AP+ VTF  L+   
Sbjct: 320 CLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNAL 379

Query: 241 IRNNETSKVVELLHRMDER 259
            +    ++  +LL  M ++
Sbjct: 380 CKAGRINEAFDLLDTMRKQ 398



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 121/257 (47%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M+  G++P+   +S L+        I     L   M+  G   N+ TY   I
Sbjct: 212 EALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICI 271

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               +   ++E+  +   M   G  P VVTY  L   L    +++ A+ LF +M+ S   
Sbjct: 272 RVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHK 331

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T +D     G++ +  +++  +        +  ++ L++ LCK G++  A++L
Sbjct: 332 PDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDL 391

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++ + G++PN+ TYN +I G     ++D A DLF +ME+ GV P   T+  L+    +
Sbjct: 392 LDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGK 451

Query: 243 NNETSKVVELLHRMDER 259
           +    K +E   +M  R
Sbjct: 452 SGHPGKALETFEKMKAR 468



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 91/191 (47%)

Query: 47  DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           ++   +H   T N ++      + VE+   ++  M  + IR  V TY  +F  LF    +
Sbjct: 116 ELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGL 175

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
             A    ++M+ +       +YN  I  L ++G+  EA E++R +     +  ++ +S L
Sbjct: 176 RQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSAL 235

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +    K   ++T   L + +  +GL PN+ TY I I     DG++D+A+ +   M+  G 
Sbjct: 236 MVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGC 295

Query: 227 APNCVTFNTLM 237
            P+ VT+  L+
Sbjct: 296 GPDVVTYTVLI 306



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 1/159 (0%)

Query: 100 LFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           L  I    HAL  F  + +  +V   T T N  ++ L  +  + + A +F  ++      
Sbjct: 98  LHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRR 157

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            ++ Y  +   L   G L  A    + +   G + N  +YN +IH     G   +A +++
Sbjct: 158 NVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVY 217

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
             M ++G+ P+  TF+ LM+   +      V+ LL  M+
Sbjct: 218 RRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEME 256



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 36/63 (57%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            ++EA ++ + +   G++PN F Y+ LI G+ L+G  + A  ++  M + GC  N  T+  
Sbjct: 1051 IEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQ 1110

Query: 61   LIN 63
            L N
Sbjct: 1111 LPN 1113


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 134/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A + L ++       N  +Y+T+IDG C    ++ A + +  M+  G   NV+TY TLI 
Sbjct: 176 AIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIG 235

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    +  + +L +EM+ K I P V TY  L   L +  +V+ A  L  EM +    A
Sbjct: 236 GFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPA 295

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY + +DG CKN  + +A  LF  ++    +     Y+ LIDGLCK G+L+ A +LF
Sbjct: 296 DVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLF 355

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q L   G   +V TYN+MI G C +G +D+A  +   ME  G  PN VTF  ++    + 
Sbjct: 356 QDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKK 415

Query: 244 NETSKVVELLHRM 256
           +E  K  +LLH M
Sbjct: 416 DENDKAEKLLHEM 428



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 120/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA      M  RG+ PN   Y+TLI GFCL G++  A  L   M +     NV TY  
Sbjct: 208 VNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAI 267

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   V+E+ NL +EM  +G    VVTY +L  G  +   ++ A  LF +M+   
Sbjct: 268 LIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWG 327

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   IDGLCK G + +A +LF+ L V  C + +  Y+ +I GLCK G L+ A 
Sbjct: 328 IQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEAL 387

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            +   +   G +PNVVT+ I+I       + DKA  L  +M AKG+
Sbjct: 388 AIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 125/245 (51%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G+ PN    + LI+ FC  G++  +  +   +   G   N +T  TL+ G C   +V++
Sbjct: 81  KGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQK 140

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           S++ + +++++G +   V+Y TL +GL +I +   A+K    ++ S        YNT ID
Sbjct: 141 SVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIID 200

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLCK+  + EA + +  +        +  Y+ LI G C  G+L  A+ L   +    + P
Sbjct: 201 GLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINP 260

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV TY I+I   C +G++ +A +L  +M  +G   + VT+ +L+ G  +N    K   L 
Sbjct: 261 NVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALF 320

Query: 254 HRMDE 258
            +M E
Sbjct: 321 MKMKE 325



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 106/221 (47%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A  L   M++ G   N+VT N LIN +C    +  S ++  ++L  G +P  +T  TL  
Sbjct: 71  AISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMK 130

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           GL    +V+ ++   D++          +Y T ++GLCK G    A +  R +      L
Sbjct: 131 GLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGL 190

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  Y+ +IDGLCK   +  A++ +  +   G+ PNV+TY  +I GFC  GQ+  A  L 
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLL 250

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +M  K + PN  T+  L+    +  +  +   LL  M  R
Sbjct: 251 NEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYR 291



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 106/225 (47%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A   F  M +      +V +  ++    K K    +++L  +M  KGI P +VT N 
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L +    + Q+  +  +  ++        T T  T + GLC  G + ++      +    
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
            ++   +Y  L++GLCKIG+   A +  + +       NVV YN +I G C D  +++A+
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           D + +M A+G+ PN +T+ TL+ G     + +    LL+ M  +N
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKN 257


>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           salviifolia]
          Length = 431

 Score =  162 bits (411), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 135/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G     ++D A ELF  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L D+M    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L    Y+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   + V+YNTL+NGY +   
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGV 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   + R G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+ V+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GL K   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AHDL  DM  KG+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQEN 347


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M +  + P+ F YS LI G C  G +D A +LF  M   G   N +T+  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  +++ ++ ++N Y +ML+ G++P +V YNTL +GL ++  V  A KL DEM+   
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E+ + +      L   A++ LI G C+ G++  A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + +   G+ P+  TY ++I G+C  G +     L  +M+  G  P  +T+N LM G 
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL  M
Sbjct: 514 CKQGQMKNANMLLEAM 529



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 127/248 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G  P    Y+ LI+ FC  G I  A+ +F  +   G     V++NTLING CK+++
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L   M    I P V TY+ L HGL +  +++ A +LFDEMQ   +     T+  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG  ++  +  A   +  +  +  +  +  Y+ L++GLCK+G +  A +L   +  VG
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+ +TY  +I G+C +G ++ A ++   M  +GV  + V F  L+ G  R+       
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 251 ELLHRMDE 258
             L  M E
Sbjct: 454 RTLREMVE 461



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 131/237 (55%), Gaps = 3/237 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A      M+  GV+P+  +Y+TL++G C  G++++AR+L   M + G   + +TY T
Sbjct: 344 MDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTT 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  D+E ++ +   M  +G+    V +  L  G     +V  A +   EM  + 
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  + +TY   IDG CK G +    +L + +++   + G+  Y+ L++GLCK G+++ A 
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAN 523

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L +++  +G+ P+ +TYNI++ G C +G   KA DL      KG+  +   + +L+
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLV 577



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 135/254 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + + + +RG+RP    ++TLI+G C +  +D    L  +M+ N    +V TY+ LI
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   ++ +  L+ EM  +G+RP  +T+  L  G +   +++ A+  + +M    V 
Sbjct: 301 HGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVK 360

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YNT ++GLCK G + +A +L   ++++  +     Y+ LIDG CK G LE+A E+
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G++ + V +  +I GFC DG++  A     +M   G+ P+  T+  ++ G  +
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480

Query: 243 NNETSKVVELLHRM 256
                   +LL  M
Sbjct: 481 KGNVKMGFKLLKEM 494



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 14/260 (5%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF-------VSMDINGCMHNVV 56
           AS    ++   G R + FV+  L+  +  +G +  A + F         +  +GC +   
Sbjct: 137 ASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGY--- 193

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
               L++    +         YSE+L  G  P V  YN L +   +   +  A  +F+E+
Sbjct: 194 ----LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEI 249

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +   +   T ++NT I+GLCK+  + E   L +T+   +    +  YS LI GLCK G+L
Sbjct: 250 RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRL 309

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A +LF  + + GL PN +T+  +I G     +MD A + +  M   GV P+ V +NTL
Sbjct: 310 DVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTL 369

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G  +  + +K  +L+  M
Sbjct: 370 LNGLCKVGDVNKARKLVDEM 389



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 59/121 (48%)

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           +G++ +A + FR +R    ++       L+D +       T W  +  +   G  P V  
Sbjct: 166 SGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQY 225

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YNI+I+ FC +G +  A  +F ++  +G+ P  V+FNTL+ G  ++    +   L   M+
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 258 E 258
           E
Sbjct: 286 E 286



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/233 (19%), Positives = 94/233 (40%), Gaps = 36/233 (15%)

Query: 60  TLINGYCKTKDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           ++I      K  + + ++++ +L + G R +   ++ L    ++   V  A++ F  +++
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S+           +D +  +   V     +  +        ++ Y+ LI+  CK G +  
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241

Query: 179 AWELFQSLPRVGLMPNVVTYNIM-----------------------------------IH 203
           A  +F  + + GL P  V++N +                                   IH
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIH 301

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G C +G++D A  LF +M+ +G+ PN +TF  L+ G  R+      +   H+M
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM 354


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 143/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL  M   G  PN   Y+ L++G   +GE+++A+EL   M   G   +V TY+ 
Sbjct: 218 VQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDP 277

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC+   +EE+  L  EMLS+G  PTVVTYNT+ +GL +  +V  A KL D M + +
Sbjct: 278 LIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 337

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +YNT I G  + G I EA  LF  LR       +  Y+ LIDGLC++G L+ A 
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAM 397

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G  P+V T+   + GFC  G +  A +LF +M  +G+ P+   + T ++G 
Sbjct: 398 RLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGE 457

Query: 241 IRNNETSKVVELLHRMDER 259
           ++  + SK   +   M  R
Sbjct: 458 LKLGDPSKAFGMQEEMLAR 476



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + ++M++ G+ P    Y+T++D FC  G +  A +L   M   GC  N VTYN 
Sbjct: 183 IDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNV 242

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG   + ++E++  L  +ML  G+  +V TY+ L  G  E  Q+E A +L +EM    
Sbjct: 243 LVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRG 302

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT + GLCK G + +A +L   +        + +Y+ LI G  ++G +  A+
Sbjct: 303 AVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 362

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L    L P+VVTYN +I G C  G +D A  L  +M   G  P+  TF T + G 
Sbjct: 363 LLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGF 422

Query: 241 IRNNETSKVVELLHRMDER 259
            +        EL   M  R
Sbjct: 423 CKMGNLPMAKELFDEMLNR 441



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 126/237 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL D MI+ G  P+ F ++T + GFC  G +  A+ELF  M   G   +   Y T
Sbjct: 393 LDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYIT 452

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G  K  D  ++  +  EML++G  P ++TYN    GL ++  ++ A +L  +M ++ 
Sbjct: 453 RIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 512

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I      G++ +A  LF  +        +  Y+ LI      G+L+ A 
Sbjct: 513 LVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAI 572

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             F  +   G+ PNV+TYN +I+G C   +MD+A++ F +M+AKG++PN  T+  L+
Sbjct: 573 LHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILI 629



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A +LLD+M+ + + P+   Y+TLI G+   G I  A  LF  +       +VVTYNT
Sbjct: 323 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNT 382

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+  D++ ++ L  EM+  G  P V T+ T   G  ++  +  A +LFDEM +  
Sbjct: 383 LIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRG 442

Query: 121 V-----------------------------------AAETSTYNTFIDGLCKNGYIVEAA 145
           +                                     +  TYN FIDGL K G + EA+
Sbjct: 443 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 502

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EL + +           Y+ +I      G L  A  LF  +   G+ P+VVTY ++IH +
Sbjct: 503 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSY 562

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              G++  A   F +M  KGV PN +T+N L+ G  +  +  +       M  +
Sbjct: 563 AVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAK 616



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 133/264 (50%), Gaps = 16/264 (6%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRA---RELFVSMDINGCMHNVVT------------ 57
           Q G + +   YS ++D     G +  A    E  VS+ +   + +VV+            
Sbjct: 74  QTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLI 133

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI-HQVEHALKLFDEM 116
            + L+  Y K   +E+ L ++ +M+SKG+ P V   N +   L +  + ++ A ++++ M
Sbjct: 134 LDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVM 193

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               +     TYNT +D  CK G + EA +L   ++ + C      Y+ L++GL   G++
Sbjct: 194 VECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEM 253

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A EL Q + R+GL  +V TY+ +I G+C  GQ+++A  L  +M ++G  P  VT+NT+
Sbjct: 254 EQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTI 313

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           M G  +    S   +LL  M  +N
Sbjct: 314 MYGLCKWGRVSDARKLLDVMVNKN 337



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 98/176 (55%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  +++ +  +Y+ M+  GI PTVVTYNT+     +   V+ AL+L  +MQ    +    
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDV 238

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  ++GL  +G + +A EL + +  L  E+ +  Y  LI G C+ G++E A  L + +
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              G +P VVTYN +++G C  G++  A  L   M  K + P+ V++NTL+ G  R
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTR 354



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 82/151 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EAS L+  M+  G+ P+   Y+++I    + G + +AR LF+ M   G   +VVTY  
Sbjct: 498 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTV 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y     ++ ++  + EM  KG+ P V+TYN L +GL ++ +++ A   F EMQ   
Sbjct: 558 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG 617

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           ++    TY   I+  C  G+  EA  L++ +
Sbjct: 618 ISPNKYTYTILINENCNLGHWQEALRLYKDM 648



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   M+ +G+ P+   Y+ LI  + + G +  A   F  M   G   NV+TYN 
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 592

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK + ++++ N ++EM +KGI P   TY  L +    +   + AL+L+ +M   +
Sbjct: 593 LINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 652

Query: 121 VAAETSTYNTFIDGLCKN 138
           +  ++ T+ + +  L K+
Sbjct: 653 IQPDSCTHRSLLKHLNKD 670


>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
          Length = 378

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 137/256 (53%), Gaps = 3/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E S +   M QRG   +A  Y+ ++DGFC +G++D+A E    M +      V TY ++I
Sbjct: 77  ETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSII 136

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  SKGI   V+ Y++L  G  ++ +++ A  + +EM    +A
Sbjct: 137 DGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLA 196

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N+ +D L K   I EA   F++++ +KC      YS LI+GLC++ K   A+  
Sbjct: 197 PNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVF 256

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +Q + + GL+PNVVTY  MI G    G +  A  LF   +A G  P+  +FN L+ G   
Sbjct: 257 WQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSH 316

Query: 243 NNETSKVVELLHRMDE 258
            N   + +E  H  +E
Sbjct: 317 AN---RAIEAYHVFEE 329



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 117/227 (51%)

Query: 32  LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
           + G  +   ++F  M+  GC  ++   NT ++   K  DVE+   ++ ++   G  P V 
Sbjct: 1   MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 60

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           +Y+ L HGL +  Q      +F  M+    A +   YN  +DG CK+G + +A E    +
Sbjct: 61  SYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM 120

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
           +V      +  Y  +IDGL KI +L+ A+ LF+     G+  NV+ Y+ +I GF   G++
Sbjct: 121 KVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 180

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           D+A+ +  +M  KG+APN  T+N+LM   ++  E ++ +     M E
Sbjct: 181 DEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKE 227



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 35/289 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++  ++   M +RG +P+  + +T +D     G++++ R +F  +   G + +V +Y+ L
Sbjct: 6   EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 65

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     E+ +++  M  +G       YN +  G  +  +V+ A +  +EM+   V
Sbjct: 66  IHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHV 125

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY + IDGL K   + EA  LF   +    EL +  YS LIDG  K+G+++ A+ 
Sbjct: 126 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 185

Query: 182 LFQSLPRVGLMPNVVTYN-----------------------------------IMIHGFC 206
           + + + + GL PNV T+N                                   I+I+G C
Sbjct: 186 ILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLC 245

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
              + +KA   + +M+ +G+ PN VT+ T++ G  +    +    L  R
Sbjct: 246 RVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFER 294



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 96/179 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ M+++G+ PN + +++L+D      EI+ A   F SM    C  N  TY+ 
Sbjct: 180 IDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 239

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+ +   ++   + EM  +G+ P VVTY T+  GL ++  +  A  LF+  + + 
Sbjct: 240 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANG 299

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
              + +++N  I+G+      +EA  +F   R+  C + ++A   L+D L K   +E A
Sbjct: 300 GIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAECIEQA 358



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L +    +G+  N  VYS+LIDGF   G ID A  +   M   G   NV T+N+
Sbjct: 145 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNS 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K +++ E+L  +  M      P   TY+ L +GL  + +   A   + EMQ   
Sbjct: 205 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T I GL K G I +A  LF   +         +++ LI+G+    +   A+
Sbjct: 265 LVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAY 324

Query: 181 ELFQSLPRVGLMPNV 195
            +F+     G   NV
Sbjct: 325 HVFEETRLRGCRINV 339



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 71/152 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA      M +    PN + YS LI+G C   + ++A   +  M   G + NVVTY T
Sbjct: 215 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K  ++ ++ +L+    + G  P   ++N L  G+   ++   A  +F+E +   
Sbjct: 275 MISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
                    + +D L K   I +AA +   LR
Sbjct: 335 CRINVKACISLLDALNKAECIEQAAVVGAVLR 366


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 137/258 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++ +LL L+   G+ PN  +Y+TLIDG C  G+I+RAR  F  M   G + N  T+  
Sbjct: 178 LDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTV 237

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K    ++  +L+ +M   G+ P + TYN L +      ++  A  LFDEM+   
Sbjct: 238 LINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERG 297

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   TYNT I G+C+   + EA +L   ++       +  Y+ LI G C +G L+ A 
Sbjct: 298 VEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKAS 357

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   L   GL P++VTYNI+I G+   G      DL  +ME +G++P+ VT   L+   
Sbjct: 358 SLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAY 417

Query: 241 IRNNETSKVVELLHRMDE 258
           +R  E  K  ++   M++
Sbjct: 418 VRLQEMEKAFQIYSSMEK 435



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 119/234 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L+D M +  V PN   Y+TLI GFC  G +D+A  L   +  NG   ++VTYN LI
Sbjct: 320 EAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILI 379

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GY K  + +   +L  EM  +GI P+ VT   L      + ++E A +++  M+   + 
Sbjct: 380 EGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLV 439

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   Y   I GLC  G + E+++LFR++  +  E     Y+ +I G CK      A  L
Sbjct: 440 PDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRL 499

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            + +   GL+PNV +Y+ +I   C DG+ ++A  L   M    + P+    N +
Sbjct: 500 LREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 130/248 (52%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++  V+ + + +  +I G C  G +D++ +L   +   G   NVV Y TLI+G CK  D+
Sbjct: 154 LKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDI 213

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E +   + +M   G+     T+  L +GLF+    +    LF++M+ + +     TYN  
Sbjct: 214 ERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCL 273

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           ++  C  G I  A +LF  +R    E  +  Y+ LI G+C+  ++  A +L   + +  +
Sbjct: 274 MNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAV 333

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PN++TYN +I GFC+ G +DKA  L   +++ G++P+ VT+N L+ G  +      V +
Sbjct: 334 SPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVAD 393

Query: 252 LLHRMDER 259
           L   M+ R
Sbjct: 394 LAREMEGR 401



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 132/255 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D M +RGV  N   Y+TLI G C    +  A +L   M       N++TYNTLI 
Sbjct: 286 AFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIG 345

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C   +++++ +L  ++ S G+ P++VTYN L  G  +    +    L  EM+   ++ 
Sbjct: 346 GFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISP 405

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              T    ID   +   + +A +++ ++        +  Y  LI GLC  G ++ + +LF
Sbjct: 406 SKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLF 465

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +S+  + + P+ V YN MIHG+C +    +A  L  +MEAKG+ PN  ++++++    ++
Sbjct: 466 RSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKD 525

Query: 244 NETSKVVELLHRMDE 258
            +  +   LL +M E
Sbjct: 526 GKWEEAEVLLDKMIE 540



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 122/239 (51%), Gaps = 1/239 (0%)

Query: 20  AFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYS 79
           A +Y ++I+    +  +D+A   F  M   G +     +N+L+    ++   E++   ++
Sbjct: 93  ALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFN 152

Query: 80  EMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
           E L + ++  V ++  +  G  E   ++ + +L   +Q   ++     Y T IDG CKNG
Sbjct: 153 E-LKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNG 211

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            I  A   F  +  +        ++ LI+GL K G  +  ++LF+ +   GL PN+ TYN
Sbjct: 212 DIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYN 271

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +++ +C +G++ +A DLF +M  +GV  N VT+NTL+ G  R     +  +L+ +M +
Sbjct: 272 CLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKK 330


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 134/250 (53%), Gaps = 2/250 (0%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGYCKT 68
           ++ +R V P+   YS LIDGFC   E+ RA +L+  M D+N C+ NV TYN  +NG  + 
Sbjct: 147 MVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN-CVPNVTTYNAFLNGLMRK 205

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             + ++  +Y EM+S G  P V+TY+TL HG     + + A +LF+ M          TY
Sbjct: 206 GRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTY 265

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  + GLCK     EA ELFR +    C+     Y+ L+ G C +GK+E A E+F  +  
Sbjct: 266 NCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVS 325

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  P+VV YN ++ GF   G+  +A  LF  M ++   P+ V+ N ++ G  +      
Sbjct: 326 KGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDD 385

Query: 249 VVELLHRMDE 258
            VE+  RM++
Sbjct: 386 AVEVFERMEQ 395



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 135/236 (57%), Gaps = 1/236 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + + MI  G  P+   YSTLI GF L  + D+A ELF +M   GC  N VTYN L+
Sbjct: 210 DAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLL 269

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK    +E+  L+ +M+ +G  P  VTY TL +G   + ++E A+++FDEM      
Sbjct: 270 HGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 329

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YN  + G  + G   EA +LF+ +   +C+    +++ +IDGL K  +L+ A E+
Sbjct: 330 PDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEV 389

Query: 183 FQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           F+ + +  G  P++VTYN +I G C + ++ +A  +F +++   ++P+   FN L+
Sbjct: 390 FERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 445



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 147/297 (49%), Gaps = 38/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--INGCMHNVVTY 58
           +D A  LL+ MI+RG  P+   +S LI+  C   +I  A+E    M+  I+    +  +Y
Sbjct: 65  VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSY 124

Query: 59  NTLINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           N+L+N  CK K V ++  ++S M+S + + P VV+Y+ L  G  +I ++  A KL+ +M 
Sbjct: 125 NSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 184

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAA-------------------------------- 145
             +     +TYN F++GL + G I +A                                 
Sbjct: 185 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHD 244

Query: 146 ---ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
              ELF  +    C      Y+CL+ GLCK  K + A ELF+ +   G  P+ VTY  ++
Sbjct: 245 QAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLL 304

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +GFCN G++++A ++F +M +KG  P+ V +N L+ G  R  +  +  +L   M  R
Sbjct: 305 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 135/258 (52%), Gaps = 1/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A +L   MI     PN   Y+  ++G    G I  A+ ++  M   GC  +V+TY+T
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+   +  +++  L+  M+S+G RP  VTYN L HGL +  + + A +LF +M    
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T + G C  G I +A E+F  +     +  + AY+CL+ G  + GK   A 
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLG 239
           +LFQ +      P+ V++NIMI G     ++D A ++F  ME   G +P+ VT+N+L+ G
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 412

Query: 240 CIRNNETSKVVELLHRMD 257
                  S+ +++   +D
Sbjct: 413 LCGEQRLSEAMKVFKEID 430



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 1/210 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L + MI RG RPNA  Y+ L+ G C   + D A ELF  M   GC  + VTY TL
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G+C    +E+++ ++ EM+SKG  P VV YN L  G F   +   A +LF  M   + 
Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC 363

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             +T ++N  IDGL K   + +A E+F R  +   C   +  Y+ LI GLC   +L  A 
Sbjct: 364 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 423

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           ++F+ + R+ L P+   +N+++      G 
Sbjct: 424 KVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 126/243 (51%), Gaps = 13/243 (5%)

Query: 25  TLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
           ++I   C  G +D A  L  +M   G   ++ T++ LIN  CK   ++E+     E L +
Sbjct: 54  SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEA----QEFL-Q 108

Query: 85  GIRPTVVT-------YNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLC 136
           G+  T+ T       YN+L + L +  +V  A  +F  M     V  +  +Y+  IDG C
Sbjct: 109 GMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFC 168

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K   +  A +L++ +  L C   +  Y+  ++GL + G++  A  +++ +   G  P+V+
Sbjct: 169 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVI 228

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY+ +IHGF    + D+AH+LF  M ++G  PN VT+N L+ G  + ++  +  EL  +M
Sbjct: 229 TYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 288

Query: 257 DER 259
            ER
Sbjct: 289 VER 291



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 1/141 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M+ +G  P+   Y+ L+ GF   G+   AR+LF  M    C  + V++N 
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372

Query: 61  LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +I+G  K K +++++ ++  M    G  P +VTYN+L  GL    ++  A+K+F E+   
Sbjct: 373 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 432

Query: 120 DVAAETSTYNTFIDGLCKNGY 140
            ++ +   +N  ++ +   G+
Sbjct: 433 KLSPDPHAFNVLLEAMYAAGH 453



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 63/116 (54%), Gaps = 5/116 (4%)

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY-SC--LIDGLCKIGKLETAWELF 183
            +  F+ GLCK+G I +A E  RT++         +  +C  +I  LCK G++++A  L 
Sbjct: 13  AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA--KGVAPNCVTFNTLM 237
           +++ + G  P++ T++++I+  C   ++ +A +    M       A +C ++N+L+
Sbjct: 73  ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLL 128



 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV---TYNIMIHGFCNDGQM 211
           K  L   A++  + GLCK GK+E A+E  +++             T + +I   C  G++
Sbjct: 6   KAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRV 65

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           D A  L   M  +G  P+  T + L+    + ++  +  E L  M+
Sbjct: 66  DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMN 111


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 135/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL  +M+  GV+P+ + YS LI+G C   ++D A E F  M + G + N VT+ T
Sbjct: 193 LDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ +  +Y +MLS+ + P ++TYNTL +GL +   ++ A  L D+M    
Sbjct: 253 LIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IBG CK G +  A E  + +      L    Y+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  V L P+  TY ++I+ FC  G + K   L  +M+  G AP+ VT+N LM G
Sbjct: 373 KMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+ NTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVML 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A E F  + V         ++ LIDG CK G+++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AHDL  DM  KG+ P+ +T+ TL+
Sbjct: 265 LAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 325 BGCCKEGDLDSAFEHRKRMIQEN 347



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+ NTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A + FDEM    +     T+ T
Sbjct: 193 LDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 253 LIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/235 (40%), Positives = 139/235 (59%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +  LMI+RG+ P+    + L++G+CL G +  A+E+F  M   G + NV++Y+TLI
Sbjct: 285 EARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLI 344

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK K V+E+L L +EM  + + P  VTYN L  GL +  +V +   L + M+ S  A
Sbjct: 345 NGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQA 404

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  +D   K   + +A  LF+ +        I  Y+ LIDGLCK G+++ A E+
Sbjct: 405 PDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEI 464

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           FQ L   G  PN+ TYNIMI+G   +G +D+A  L L+M   G  PN VTF+ L+
Sbjct: 465 FQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLV 519



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 133/240 (55%), Gaps = 1/240 (0%)

Query: 4   ASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           A RLL+ M+ +  VRP+ + ++ L+D  C  G +  AR +F  M   G   +VV+ N L+
Sbjct: 250 AVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALM 309

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+C    + E+  ++  M+ +G  P V++Y+TL +G  ++  V+ AL+L  EM   ++ 
Sbjct: 310 NGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLV 369

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TYN  +DGL K+G ++   +L   +R       +  Y+ L+D   K   L+ A  L
Sbjct: 370 PDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALAL 429

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +   G+ PN+ TYNI+I G C  G+M  A ++F  +  KG  PN  T+N ++ G  R
Sbjct: 430 FQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRR 489



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  ++  +++RG   + F  +TL+ G CL G    A  L+      G   + V Y T
Sbjct: 107 MGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGT 166

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK     +++ L  +M   G+RP ++ YN +  GL +   V  A  L  EM    
Sbjct: 167 LINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKG 226

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS--CLIDGLCKIGKLET 178
           +  +  TYN+ I G C  G    A  L   + V+K ++  + Y+   L+D LCK+G +  
Sbjct: 227 ICIDVFTYNSLIHGFCGAGQFQGAVRLLNEM-VMKEDVRPDVYTFNILVDALCKLGMVAE 285

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +F  + + GL P+VV+ N +++G+C  G M +A ++F  M  +G  PN ++++TL+ 
Sbjct: 286 ARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLIN 345

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G  +     + + LL  M +RN
Sbjct: 346 GYCKVKMVDEALRLLTEMHQRN 367



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 2/238 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNT 60
           D+A      M+     P+    + L+     T        L   +D  G    ++VT + 
Sbjct: 37  DDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSI 96

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            IN       +  + ++ ++++ +G      T  TL  GL    +   AL L+D      
Sbjct: 97  FINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKG 156

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +   Y T I+GLCK G   +A EL R +        +  Y+ ++DGLCK G +  A 
Sbjct: 157 FSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEAC 216

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLM 237
            L   +   G+  +V TYN +IHGFC  GQ   A  L  +M  K  V P+  TFN L+
Sbjct: 217 GLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILV 274



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 56/102 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   ++  G+ PN   Y+ LIDG C  G +  A+E+F  + + GC  N+ TYN 
Sbjct: 423 LDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNI 482

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           +ING  +   ++E+  L  EM+  G  P  VT++ L   L E
Sbjct: 483 MINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 35/135 (25%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI------------------------ 36
           +DEA RLL  M QR + P+   Y+ L+DG   +G +                        
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 37  -----------DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                      D+A  LF  +   G   N+ TYN LI+G CK   ++ +  ++  +  KG
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472

Query: 86  IRPTVVTYNTLFHGL 100
            RP + TYN + +GL
Sbjct: 473 CRPNIRTYNIMINGL 487



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 1/153 (0%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC-ELGIEAYSC 165
           + A+  F  M H        + N  +  + K  +      L   L      +  +   S 
Sbjct: 37  DDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSI 96

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            I+ L  +G++  A+ +   + + G   +  T   ++ G C  G+  +A +L+    +KG
Sbjct: 97  FINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKG 156

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            + + V + TL+ G  +  +T   +ELL +M++
Sbjct: 157 FSFDEVCYGTLINGLCKMGKTRDAIELLRKMEK 189


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +   M + G++P    Y+TL+D +C  G++ +  +L   M   GC  N VTYN 
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K  + E++  L  EML  G++ +  TYN L +G F    +  AL L +EM    
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +   +TYN+FI GLCK G + +A +    +        + +Y+ LI G C++G L  A+
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L  + L P +VTYN ++ G C  G+++ A  L ++M  +G+AP+ VT+  L+ G 
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 241 IRNNETSKVVELLHRM 256
            +    S   E    M
Sbjct: 455 CKMGSLSMAQEFFDEM 470



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 139/250 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M +RG  PN   Y+ LI+G    GE ++A+ L   M   G   +  TYN LI GY 
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               + E+L+L  EM+ KG  PTV TYN+  +GL ++ ++  A++   +M  +++  +  
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I G C+ G +++A  LF  LR +     I  Y+ L+DGLC+ G+LE A +L   +
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ P++VTY I+++G C  G +  A + F +M  +G+  +   + T ++G ++  +T
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 247 SKVVELLHRM 256
           S+   L   M
Sbjct: 496 SRAFSLQEEM 505



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M+ +G  P    Y++ I G C  G +  A +    M  N  + +VV+YNT
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC+  ++ ++  L+ E+ S  + PT+VTYNTL  GL    ++E A +L  EM +  
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS---------------- 164
           +A +  TY   ++G CK G +  A E F  +     EL   AY+                
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499

Query: 165 -------------------CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                               ++DGLCK+G LE A EL Q +   G++P+ VTY  +IH  
Sbjct: 500 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAH 559

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +G++ K  ++F +M +KG+ P+ VT+  L+ G        +       M E+
Sbjct: 560 LENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK 613



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 121/242 (50%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P    Y+TL+DG C  GE++ A++L V M   G   ++VTY  L+NG CK   +  +   
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + EML +G+      Y T   G  ++     A  L +EM       +   YN  +DGLCK
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G + EA+EL + +           Y+ +I    + G+L    E+F  +   GL P+VVT
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y ++IHG    G++++A   F +M+ KG+ PN +T+N+L+ G  +     +       M 
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMV 646

Query: 258 ER 259
           E+
Sbjct: 647 EK 648



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 122/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +L   MI  G+ P+   Y+ L++G C  G +  A+E F  M   G   +   Y T
Sbjct: 425 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G  K  D   + +L  EML+KG  P ++ YN +  GL ++  +E A +L  +M    
Sbjct: 485 RIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY + I    +NG + +  E+F  +        +  Y+ LI G    G+LE A+
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             F  +   G++PNV+TYN +I+G C   +MD+A++ F +M  KG+ PN  ++  L+
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 115/234 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    D M+  G+  +++ Y+T I G    G+  RA  L   M   G   +++ YN +++
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK  ++EE+  L  +M+S G+ P  VTY ++ H   E  ++    ++F EM    +  
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   I G    G +  A   F  ++       +  Y+ LI+GLCK+ +++ A+  F
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   G+ PN  +Y I+I+  CN G   +A  L+  M  +GV P+  T + L+
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 5/176 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EAS LL  M+  GV P+   Y+++I      G + + RE+F  M   G   +VVTY  
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+     +E +   +SEM  KGI P V+TYN+L +GL ++ +++ A   F EM    
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG 649

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK-IGK 175
           +     +Y   I+  C  G   EA  L++ +     + G++  SC    L K +GK
Sbjct: 650 IFPNKYSYTILINENCNMGNWQEALSLYKQM----LDRGVQPDSCTHSALLKQLGK 701



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 24/267 (8%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--INGCMHNVVTYNTLING------ 64
           Q G R + FV+  +++   +  + +  R  +  M+  IN  MH +V  + LI G      
Sbjct: 108 QPGFRRSEFVFCAILE---ILAQNNLMRSAYWVMERVINANMHRIV--DVLIGGCVSSEV 162

Query: 65  -----------YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
                      Y K   VE+ L+++ +M+   + P V   N +   L +   +  A++++
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M    +     TYNT +D  CK G + +  +L   ++   C      Y+ LI+GL K 
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G+ E A  L   + + GL  +  TYN +I+G+ N G + +A  L  +M  KG +P   T+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           N+ + G  +    S  ++ L  M   N
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANN 369



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 71/128 (55%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +G+ P+   Y+ LI G    G ++RA   F  M   G + NV+TYN+LING CK + 
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++ N ++EM+ KGI P   +Y  L +    +   + AL L+ +M    V  ++ T++ 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 131 FIDGLCKN 138
            +  L K+
Sbjct: 695 LLKQLGKD 702


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 142/256 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  M  +G  P+   Y+T+IDG+C  GE+ +  +L   M + G   N+ TY+++I
Sbjct: 128 EAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSII 187

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK+  V E   +  EM+ +G+ P  V Y TL  G  ++   + A KLF EM+  ++ 
Sbjct: 188 LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            ++  ++  I GL  +G +VEA +LF  +     E     Y+ LIDG CK+G+++ A+ L
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + ++GL PNVVTY  +  G C  G++D A++L  +M  KG+  N  T+NT++ G  +
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367

Query: 243 NNETSKVVELLHRMDE 258
                + V+L+  M E
Sbjct: 368 AGNILQAVKLMEEMKE 383



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 135/237 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L + MI++G  P+   Y+ LIDG+C  GE+ +A  L   M   G   NVVTY  L 
Sbjct: 268 EADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALA 327

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK+ +++ +  L  EM  KG++  + TYNT+ +GL +   +  A+KL +EM+ + + 
Sbjct: 328 DGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLH 387

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TY T +D   K G +V+A EL R +     +  +  ++ L++GLC  GKLE    L
Sbjct: 388 PDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERL 447

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +   G+MPN  TYN ++  +C    M  + +++  M A+GV P+  T+N L+ G
Sbjct: 448 LKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKG 504



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 142/278 (51%), Gaps = 36/278 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-------------- 48
           E  ++L  M++RGV P+  +Y+TLIDGFC  G    A +LF  M+               
Sbjct: 198 EGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALI 257

Query: 49  ---------------------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                                 G   + VTY  LI+GYCK  +++++  L+++M+  G+ 
Sbjct: 258 CGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLT 317

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P VVTY  L  GL +  +++ A +L  EM    +    STYNT ++GLCK G I++A +L
Sbjct: 318 PNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKL 377

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              ++          Y+ L+D   K G++  A EL + +   GL P VVT+N++++G C 
Sbjct: 378 MEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCM 437

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN 244
            G+++    L   M  KG+ PN  T+N++M   CIRNN
Sbjct: 438 SGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +  +L+  M  +G++PN + YS++I   C +G++    ++   M   G   + V Y T
Sbjct: 161 LQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTT 220

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  + + +  L+SEM ++ I P  + ++ L  GL    +V  A KLF+EM    
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   IDG CK G + +A  L   +  +     +  Y+ L DGLCK G+L+TA 
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + R GL  N+ TYN +++G C  G + +A  L  +M+  G+ P+ +T+ TLM   
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400

Query: 241 IRNNETSKVVELLHRMDER 259
            +  E  K  ELL  M +R
Sbjct: 401 YKTGEMVKARELLREMLDR 419



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  L + M+Q G+ PN   Y+ L DG C +GE+D A EL   M   G   N+ TYNT
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK  ++ +++ L  EM   G+ P  +TY TL    ++  ++  A +L  EM    
Sbjct: 361 IVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG 420

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+N  ++GLC +G + +   L + +           Y+ ++   C    +  + 
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST 480

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+++ +   G++P+  TYNI+I G C    M +A  L  +M  K       ++N L+ G 
Sbjct: 481 EIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGF 540

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  +L   M
Sbjct: 541 FKRKKLLEARQLFEEM 556



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 112/215 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L++ M + G+ P+   Y+TL+D +  TGE+ +AREL   M   G    VVT+N L+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C +  +E+   L   ML KGI P   TYN++       + +  + +++  M    V 
Sbjct: 433 NGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV 492

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +++TYN  I G CK   + EA  L + +   +  L   +Y+ LI G  K  KL  A +L
Sbjct: 493 PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQL 552

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           F+ + R GL+ +   YN+ +     +G M+   +L
Sbjct: 553 FEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 89/182 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  LL  M+ RG++P    ++ L++G C++G+++    L   M   G M N  TYN+
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNS 465

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++  YC   ++  S  +Y  M ++G+ P   TYN L  G  +   ++ A  L  EM    
Sbjct: 466 IMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKR 525

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                S+YN  I G  K   ++EA +LF  +R        E Y+  +D   + G +ET  
Sbjct: 526 FNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTL 585

Query: 181 EL 182
           EL
Sbjct: 586 EL 587



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 10/249 (4%)

Query: 6   RLLDLMIQRGVRPNAF--VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           RL+      G  P+ F   +  L++     G ++ AR+ F  +   G   +  + N  + 
Sbjct: 27  RLIYTYKDWGSDPHVFDVFFQVLVEA----GLLNEARKFFDKLLNYGVALSAGSCNLYLT 82

Query: 64  GYCKTKD-VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
                +D +   L ++SE    G+     +YN L + LF + ++  A  L   M+     
Sbjct: 83  CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI 142

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y T IDG C  G + +  +L + +++   +  +  YS +I  LCK GK+    ++
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + G+ P+ V Y  +I GFC  G    A+ LF +MEA+ + P+ + F+ L+ G   
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGL-- 260

Query: 243 NNETSKVVE 251
            + + KVVE
Sbjct: 261 -SGSGKVVE 268



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 75/150 (50%)

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           LK+F E     V   T +YN  ++ L + G I EA  L   +    C   + +Y+ +IDG
Sbjct: 95  LKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDG 154

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            C +G+L+   +L + +   GL PN+ TY+ +I   C  G++ +   +  +M  +GV P+
Sbjct: 155 YCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPD 214

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            V + TL+ G  +   T    +L   M+ R
Sbjct: 215 HVIYTTLIDGFCKLGNTQAAYKLFSEMEAR 244



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 35/150 (23%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM-----HNV 55
           +++  RLL  M+++G+ PNA  Y++++  +C+   +  + E++  M   G +     +N+
Sbjct: 441 LEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNI 500

Query: 56  V------------------------------TYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           +                              +YN LI G+ K K + E+  L+ EM  +G
Sbjct: 501 LIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG 560

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           +  +   YN      +E   +E  L+L DE
Sbjct: 561 LVASAEIYNLFVDMNYEEGNMETTLELCDE 590


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 131/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 129/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP A  ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++ +  L++EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 129/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GEI  A+ +F ++   G     V++NTL+NGY +  D++E 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  ++++A +LF+EM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            VTY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  +++ + +++  +   G+RPT V++NTL +G   +  ++   +L + MQ
Sbjct: 139 FNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   +  A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ VT+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKEN 341


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 131/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 129/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++   G   +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E++  +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +   G+RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E++  +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKEN 341



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 115/238 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + +V+S LI  +  +G +  A E +     +       T   +I    K K  +     Y
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN VT+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L   M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEM 302


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 140/244 (57%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P+  +Y+ +I GFC  G +  A  +   M   GC+ +VVTYNTL+NG CK + + ++
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L +EM  +G+ P + T+ TL HG     +++ AL+LFD M +  +  +  TYNT IDG
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           +C+ G + +A +L+  +   +       YS LID  C+ G++E A+     +   G++PN
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           ++TYN +I G+C  G + K       M    V+P+ +T+NTL+ G I+ ++     +LL+
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 255 RMDE 258
            M++
Sbjct: 251 MMEK 254



 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 147/257 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL+ M +RGV P+   ++TLI G+C+ G++D+A +LF +M       ++VTYNTLI
Sbjct: 69  DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 128

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+  D++++ +L+ +M S+ I P  VTY+ L     E  QVE A    DEM +  + 
Sbjct: 129 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 188

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I G C++G + +  +  + + V K    +  Y+ LI G  K  K+  A++L
Sbjct: 189 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 248

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + +  + P+VVTYN++I+GF   G + +A  +F  M AKG+ P+  T+ +++ G + 
Sbjct: 249 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 308

Query: 243 NNETSKVVELLHRMDER 259
              + +  +L   M +R
Sbjct: 309 AGNSKEAFQLHDEMLQR 325



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 122/229 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +L D M+ + +RP+   Y+TLIDG C  G++D+A +L+  M       N VTY+ 
Sbjct: 102 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 161

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C+   VE++     EM++KGI P ++TYN++  G      V    K   +M  + 
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+ +  TYNT I G  K   + +A +L   +   K +  +  Y+ LI+G    G ++ A 
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 281

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            +F+ +   G+ P+  TY  MI+G    G   +A  L  +M  +G AP+
Sbjct: 282 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 86/158 (54%)

Query: 80  EMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
           EM   G+ P  V Y  +  G      +  AL++ DEM       +  TYNT ++GLCK  
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            +++A  L   +R       +  ++ LI G C  GKL+ A +LF ++    L P++VTYN
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +I G C  G +DKA+DL+ DM ++ + PN VT++ L+
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 163



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 74/145 (51%)

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM+   +  +   Y   I G C+ G + +A  +   +    C   +  Y+ L++GLCK  
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +L  A  L   +   G+ P++ T+  +IHG+C +G++DKA  LF  M  + + P+ VT+N
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
           TL+ G  R  +  K  +L   M  R
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSR 150


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 8/262 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+E    L  MI +G++PN + Y   I G+C  GE+  A   F+ M  +G   N V    
Sbjct: 528 MEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTD 587

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  +  ++   +  ML +G+ P V T++ L HGL +  +++ A+ +F E+    
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           +  +  TY + I  LCK G +  A EL   +    C+ GI      Y+ LI+GLCK+G++
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDM----CKKGINPNIVTYNALINGLCKLGEI 703

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A ELF  +P  GL  N VTY+ +I G+C    + +A  LF  M+  GV P+   +  L
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCAL 763

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           + GC +   T K + L   M E
Sbjct: 764 IDGCCKAGNTEKALSLFLGMVE 785



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 136/255 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA ++L +M  +G+ P+ F Y+T+I GFC  G+++  +   V M   G   NV TY   
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAF 553

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC+  +++ +   + EML  GI P  V    L  G  +      A   F  M    V
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGV 613

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T++  I GL KNG + EA  +F  L        +  Y+ LI  LCK G L+ A+E
Sbjct: 614 LPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFE 673

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + + G+ PN+VTYN +I+G C  G++ KA +LF  +  KG+A N VT++T++ G  
Sbjct: 674 LHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYC 733

Query: 242 RNNETSKVVELLHRM 256
           ++   ++  +L H M
Sbjct: 734 KSANLTEAFQLFHGM 748



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   +L  M ++G  PN   YS +I G C  G++D A EL  SM   G + +   Y T
Sbjct: 248 VEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYAT 307

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+ K   E  ++  EM + G++P  V Y  L +G  +   +  A ++ +EM    
Sbjct: 308 LIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARK 367

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TY   I GLCK G + +A +LF  + ++  +  I+ Y+CLI+G  K+  +E A+
Sbjct: 368 IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAY 427

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + +  L  N      +++G C+ G + +A++LF +M + G+ PN V + T++ G 
Sbjct: 428 ELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGL 487

Query: 241 IRNNETSKVVELLHRMDER 259
           ++     + +++L  M ++
Sbjct: 488 VKEGRFEEAIKILGVMKDQ 506



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 128/243 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   +LD M   G++P+   Y+ LI+GF    +I  A ++   M       N  TY  LI
Sbjct: 320 EGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALI 379

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  D+E++ +L+SEM   GI+P + TYN L  G +++  +E A +L  E++  ++ 
Sbjct: 380 HGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLT 439

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A        ++GLC  G +  A ELF+ +     +  I  Y+ ++ GL K G+ E A ++
Sbjct: 440 ANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKI 499

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   GL P+V  YN +I GFC  G+M++     ++M AKG+ PN  T+   + G  R
Sbjct: 500 LGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCR 559

Query: 243 NNE 245
             E
Sbjct: 560 AGE 562



 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 143/283 (50%), Gaps = 34/283 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +GV P+   +S LI G    G++  A  +F  +   G + +V TY +LI+  CK  D
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +  L+ +M  KGI P +VTYN L +GL ++ ++  A +LFD +    +A  + TY+T
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLK---------------CELG---------------- 159
            I G CK+  + EA +LF  ++++                C+ G                
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787

Query: 160 ---IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
                A++ LIDG  K+GKL  A++L + +    + PN VTY I+I   C  G + +A  
Sbjct: 788 IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           LF++M+ + V PN +T+ +L+ G  R    S++  L   M  R
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVAR 890



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A R    M+  G+ PN  + + LIDG+C  G   +A   F  M   G + +V T++ 
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSV 622

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K   ++E++ ++SE+L KG+ P V TY +L   L +   ++ A +L D+M    
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I+GLCK G I +A ELF  +           YS +I G CK   L  A+
Sbjct: 683 INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAF 742

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +  VG+ P+   Y  +I G C  G  +KA  LFL M  +G+A +   FN L+ G 
Sbjct: 743 QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGF 801

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  +L+  M
Sbjct: 802 FKLGKLIEAYQLVEDM 817



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 120/246 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ + M  R ++ N F Y  LI G C  G++++A +LF  M + G   ++ TYN LI 
Sbjct: 356 AFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIE 415

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY K +++E++  L  E+  + +         + +GL     +  A +LF EM    +  
Sbjct: 416 GYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKP 475

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               Y T + GL K G   EA ++   ++       +  Y+ +I G CK GK+E      
Sbjct: 476 NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYL 535

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL PNV TY   IHG+C  G+M  A   F++M   G+APN V    L+ G  ++
Sbjct: 536 VEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKD 595

Query: 244 NETSKV 249
             T+K 
Sbjct: 596 GNTTKA 601



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  L D M ++G+ PN   Y+ LI+G C  GEI +ARELF  +   G   N VTY+T
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY--------------------------- 93
           +I GYCK+ ++ E+  L+  M   G+ P    Y                           
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787

Query: 94  -------NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
                  N L  G F++ ++  A +L ++M  + +     TY   I+  C  G I EA +
Sbjct: 788 IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LF  ++       +  Y+ L+ G  +IG+    + LF  +   G+ P+ + +++M+    
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI-RNNETSKVVELLHRMDER 259
            +G   KA  L  DM ++GV   C    T+++  + ++N  S+V+++L  ++++
Sbjct: 908 KEGNWIKALKLVDDMLSEGVNV-CKNLYTILIDALCKHNNLSEVLKVLDEVEKQ 960



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 102/207 (49%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V TY  LIN YC+   VEE  ++  +M  KG  P +VTY+ +  GL     V+ AL+L 
Sbjct: 231 DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELK 290

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M +  +  +   Y T IDG C+     E   +   +  +  +    AY+ LI+G  K 
Sbjct: 291 RSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQ 350

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
             +  A+++ + +    +  N  TY  +IHG C  G ++KA DLF +M   G+ P+  T+
Sbjct: 351 SDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTY 410

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           N L+ G  +     K  ELL  + + N
Sbjct: 411 NCLIEGYYKVQNMEKAYELLIEIKKEN 437



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 34/248 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH------- 53
           + EA +L   M   GV P++FVY  LIDG C  G  ++A  LF+ M   G          
Sbjct: 738 LTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNAL 797

Query: 54  ---------------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                                      N VTY  LI  +C   +++E+  L+ EM  + +
Sbjct: 798 IDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNV 857

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P V+TY +L HG   I +      LFDEM    +  +   ++  +D   K G  ++A +
Sbjct: 858 MPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALK 917

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L   +      +    Y+ LID LCK   L    ++   + + G   ++ T   ++  F 
Sbjct: 918 LVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFH 977

Query: 207 NDGQMDKA 214
             G+ D+A
Sbjct: 978 RAGRTDEA 985



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 92/186 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L++ M+   + PN   Y+ LI+  C  G I  A +LF+ M     M NV+TY +L+
Sbjct: 809 EAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLL 868

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY +     E  +L+ EM+++GI+P  + ++ +     +      ALKL D+M    V 
Sbjct: 869 HGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVN 928

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              + Y   ID LCK+  + E  ++   +     +L +     L+    + G+ + A  +
Sbjct: 929 VCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRV 988

Query: 183 FQSLPR 188
            +S+ R
Sbjct: 989 LESMVR 994



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 1/202 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +  LI+ Y K   + E+++++    +      +   N+L   L + ++VE   K++  M 
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            + +  +  TY   I+  C+ G + E   +   +    C   +  YS +I GLC+ G ++
Sbjct: 226 GA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVD 284

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A EL +S+   GL+P+   Y  +I GFC   +  +   +  +M   G+ P+ V +  L+
Sbjct: 285 EALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344

Query: 238 LGCIRNNETSKVVELLHRMDER 259
            G ++ ++     ++   M  R
Sbjct: 345 NGFVKQSDIGGAFQVKEEMFAR 366


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 130/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M  +   P+ F Y TL+DG C    ID A  L   M I GC  + VT+N 
Sbjct: 188 VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV 247

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  D+     L   M  KG  P  VTYNT+ +GL    +++ A+ L D M  S 
Sbjct: 248 LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK 307

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GL K G  V+   L  +L          AYS LI GL K  K E A 
Sbjct: 308 CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAM 367

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +   G  PN+V Y+ +I G C +G++D+A ++  +M  KG  PN  T+++L+ G 
Sbjct: 368 GLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGF 427

Query: 241 IRNNETSKVVELLHRMDERN 260
            +   + K + +   M + N
Sbjct: 428 FKTGNSQKAIRVWKEMAKNN 447



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 128/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M   ++L+D M  +G  PN   Y+T+I+G CL G++D+A  L   M  + C+ N VTY T
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 317

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K     + ++L S +  +G       Y+TL  GLF+  + E A+ L+ +M    
Sbjct: 318 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 377

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y+  IDGLC+ G + EA E+   +    C      YS LI G  K G  + A 
Sbjct: 378 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 437

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++ + +   +PN + Y+++IHG C DG++ +A  ++  M  +G+ P+ V +++++ G
Sbjct: 438 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 496



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 126/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD M   G  P++  ++ LI+G C  G++ R  +L  +M + GC+ N VTYNT
Sbjct: 223 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 282

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C    ++++++L   M++    P  VTY TL +GL +  +    + L   ++   
Sbjct: 283 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A    Y+T I GL K     EA  L++ +    C+  I  YS LIDGLC+ GKL+ A 
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+   +   G  PN  TY+ +I GF   G   KA  ++ +M      PN + ++ L+ G
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHG 461



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 118/233 (50%), Gaps = 2/233 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  + +RG   N + YSTLI G     + + A  L+  M   GC  N+V Y+ LI+G C
Sbjct: 334 LLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLC 393

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++E+  +  EM++KG  P   TY++L  G F+    + A++++ EM  ++      
Sbjct: 394 REGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEI 453

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y+  I GLC++G + EA  ++  +        + AYS +I GLC  G +E   +LF  +
Sbjct: 454 CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 513

Query: 187 --PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                   P+VVTYNI++   C    +  A DL   M  +G  P+ +T N  +
Sbjct: 514 LCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFL 566



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 3/226 (1%)

Query: 37  DRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML--SKGIRPTVVTY 93
           ++A ELF  M D   C   V ++N+++N   +      +L  Y   +     I P V+++
Sbjct: 116 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 175

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           N +   + ++  V+ A+++F EM       +  TY T +DGLCK   I EA  L   +++
Sbjct: 176 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 235

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
             C      ++ LI+GLCK G +    +L  ++   G +PN VTYN +I+G C  G++DK
Sbjct: 236 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 295

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A  L   M A    PN VT+ TL+ G ++   +   V LL  ++ER
Sbjct: 296 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 341



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 105/206 (50%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           NV+++N +I   CK   V+ ++ ++ EM  +   P V TY TL  GL +  +++ A+ L 
Sbjct: 171 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 230

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           DEMQ       + T+N  I+GLCK G +V   +L   + +  C      Y+ +I+GLC  
Sbjct: 231 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 290

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GKL+ A  L   +     +PN VTY  +I+G    G+      L   +E +G   N   +
Sbjct: 291 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 350

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           +TL+ G  +  ++ + + L  +M E+
Sbjct: 351 STLISGLFKEEKSEEAMGLWKKMVEK 376



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 37/172 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHN------ 54
           +DEA  +L  M+ +G  PNAF YS+LI GF  TG   +A  ++  M  N C+ N      
Sbjct: 398 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 457

Query: 55  -----------------------------VVTYNTLINGYCKTKDVEESLNLYSEMLSK- 84
                                        VV Y+++I+G C    VE  L L++EML + 
Sbjct: 458 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 517

Query: 85  -GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
              +P VVTYN L   L + + + HA+ L + M       +  T N F++ L
Sbjct: 518 SDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 23/160 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTY 58
           + EA  +   M+ RG+RP+   YS++I G C  G ++   +LF  M    +    +VVTY
Sbjct: 468 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 527

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE---------------- 102
           N L+   CK   +  +++L + ML +G  P ++T N   + L E                
Sbjct: 528 NILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELV 587

Query: 103 --IHQVEH---ALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +H+ +    A K+ + M    +    ST+   I  LCK
Sbjct: 588 VRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 149/292 (51%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    D ++  G   +   Y TLI+G C  GE   A +L   +D      N V YNT+I
Sbjct: 156 QALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVI 215

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K K V ++ +LYSEM++K I P VVTY+ L  G F + +++ A+ LF++M   ++ 
Sbjct: 216 DGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIK 275

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +DG CK G + +A  +   + +   +  +  ++ L+DG CK  K++    +
Sbjct: 276 PDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTV 335

Query: 183 FQSLPRVGLMPNVVT-----------------------------------YNIMIHGFCN 207
           F  + + G+ PNVVT                                   YNIMI+GFC 
Sbjct: 336 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCK 395

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             ++DKA  LF++M  K + P+ VT+N+L+ G  ++ + S   +L++ M +R
Sbjct: 396 IKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDR 447



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 23/247 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + MI   ++P+ + ++ L+DGFC  G + +A+ +   M I     NV T+NT
Sbjct: 259 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNT 318

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK + ++E   +++ M+ +GI+P VVTY +L  G   + QV  A K+F+ M    
Sbjct: 319 LVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRG 378

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   +YN  I+G CK   + +A +LF  +        +  Y+ LIDGLCK GK+  A+
Sbjct: 379 VTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAF 438

Query: 181 ELFQSLPRVGLMPNVVTYN-----------------------IMIHGFCNDGQMDKAHDL 217
           +L   +   G  PN++TYN                       I+I G C  G+++ A  +
Sbjct: 439 QLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKV 498

Query: 218 FLDMEAK 224
           F D+  K
Sbjct: 499 FEDLLVK 505



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 131/237 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+ + + P+   YS LI GF + G++  A +LF  M +     +V T+N 
Sbjct: 224 VNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNI 283

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   ++++ N+   M+ + I+P V T+NTL  G  +  +++    +F  M    
Sbjct: 284 LVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQG 343

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + +DG C    + +A ++F T+        + +Y+ +I+G CKI K++ A 
Sbjct: 344 IKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAM 403

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF  +    ++P+VVTYN +I G C  G++  A  L  +M  +G  PN +T+N+++
Sbjct: 404 KLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL 460



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 125/231 (54%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ PN   ++ LI+ FC  G I  A  +   +   G   +++T NT I G+C    + ++
Sbjct: 98  GINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQA 157

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           LN + ++++ G     V+Y TL +GL ++ +   AL+L   +    V      YNT IDG
Sbjct: 158 LNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDG 217

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           + K+ ++ +A +L+  +   +    +  YS LI G   +GKL+ A +LF  +    + P+
Sbjct: 218 MSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPD 277

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           V T+NI++ GFC +G++ KA ++   M  + + PN  TFNTL+ G  ++ +
Sbjct: 278 VYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRK 328



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 121/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L + ++ +     AF ++ ++     +        L   M+  G   N VT+N 
Sbjct: 49  VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 108

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C+   +  + ++ +++L  G  P ++T NT   G     Q+  AL   D++    
Sbjct: 109 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 168

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y T I+GLCK G    A +L R +     +L    Y+ +IDG+ K   +  A+
Sbjct: 169 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAF 228

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +    + P+VVTY+ +I GF   G++  A DLF  M  + + P+  TFN L+ G 
Sbjct: 229 DLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 288

Query: 241 IRNNETSKVVELLHRM 256
            +     K   +L  M
Sbjct: 289 CKEGRLKKAKNVLDMM 304



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 5/179 (2%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           +L K   P   + +T FH     + V+ A+ LF+ + H +       +N  +  L K+ +
Sbjct: 29  LLQKNFIP-YSSISTTFHS----NDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKH 83

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
                 L + +           ++ LI+  C++G +  A+ +   + ++G  P+++T N 
Sbjct: 84  YHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNT 143

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            I GFC  GQ+ +A +    + A G   + V++ TL+ G  +  ET   ++LL R+D +
Sbjct: 144 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGK 202



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 1/203 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N + Y+++   +  + DV+ +++L++ +L +    T   +N +   L +       L L 
Sbjct: 33  NFIPYSSISTTF-HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLS 91

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            +M+   +     T+N  I+  C+ G I  A  +   +  +  E  I   +  I G C  
Sbjct: 92  QQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLK 151

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G++  A      L  +G   + V+Y  +I+G C  G+   A  L   ++ K V  N V +
Sbjct: 152 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMY 211

Query: 234 NTLMLGCIRNNETSKVVELLHRM 256
           NT++ G  ++   +   +L   M
Sbjct: 212 NTVIDGMSKDKHVNDAFDLYSEM 234


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +   M + G++P    Y+TL+D +C  G++ +  +L   M   GC  N VTYN 
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K  + E++  L  EML  G++ +  TYN L +G F    +  AL L +EM    
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +   +TYN+FI GLCK G + +A +    +        + +Y+ LI G C++G L  A+
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L  + L P +VTYN ++ G C  G+++ A  L ++M  +G+AP+ VT+  L+ G 
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 241 IRNNETSKVVELLHRM 256
            +    S   E    M
Sbjct: 455 CKMGSLSMAQEFFDEM 470



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 139/250 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M +RG  PN   Y+ LI+G    GE ++A+ L   M   G   +  TYN LI GY 
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               + E+L+L  EM+ KG  PTV TYN+  +GL ++ ++  A++   +M  +++  +  
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I G C+ G +++A  LF  LR +     I  Y+ L+DGLC+ G+LE A +L   +
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ P++VTY I+++G C  G +  A + F +M  +G+  +   + T ++G ++  +T
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 247 SKVVELLHRM 256
           S+   L   M
Sbjct: 496 SRAFSLQEEM 505



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M+ +G  P    Y++ I G C  G +  A +    M  N  + +VV+YNT
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC+  ++ ++  L+ E+ S  + PT+VTYNTL  GL    ++E A +L  EM +  
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 439

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS---------------- 164
           +A +  TY   ++G CK G +  A E F  +     EL   AY+                
Sbjct: 440 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 499

Query: 165 -------------------CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                               ++DGLCK+G LE A EL Q +   G++P+ VTY  +IH  
Sbjct: 500 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAH 559

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +G++ K  ++F +M +KG+ P+ VT+  L+ G        +       M E+
Sbjct: 560 LENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK 613



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 121/242 (50%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P    Y+TL+DG C  GE++ A++L V M   G   ++VTY  L+NG CK   +  +   
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + EML +G+      Y T   G  ++     A  L +EM       +   YN  +DGLCK
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G + EA+EL + +           Y+ +I    + G+L    E+F  +   GL P+VVT
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y ++IHG    G++++A   F +M+ KG+ PN +T+N+L+ G  +     +       M 
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMV 646

Query: 258 ER 259
           E+
Sbjct: 647 EK 648



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 122/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +L   MI  G+ P+   Y+ L++G C  G +  A+E F  M   G   +   Y T
Sbjct: 425 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G  K  D   + +L  EML+KG  P ++ YN +  GL ++  +E A +L  +M    
Sbjct: 485 RIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY + I    +NG + +  E+F  +        +  Y+ LI G    G+LE A+
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             F  +   G++PNV+TYN +I+G C   +MD+A++ F +M  KG+ PN  ++  L+
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 115/234 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    D M+  G+  +++ Y+T I G    G+  RA  L   M   G   +++ YN +++
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK  ++EE+  L  +M+S G+ P  VTY ++ H   E  ++    ++F EM    +  
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   I G    G +  A   F  ++       +  Y+ LI+GLCK+ +++ A+  F
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   G+ PN  +Y I+I+  CN G   +A  L+  M  +GV P+  T + L+
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 5/176 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EAS LL  M+  GV P+   Y+++I      G + + RE+F  M   G   +VVTY  
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+     +E +   +SEM  KGI P V+TYN+L +GL ++ +++ A   F EM    
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG 649

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK-IGK 175
           +     +Y   I+  C  G   EA  L++ +     + G++  SC    L K +GK
Sbjct: 650 IFPNKYSYTILINENCNMGNWQEALSLYKQM----LDRGVQPDSCTHSALLKQLGK 701



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 24/267 (8%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--INGCMHNVVTYNTLING------ 64
           Q G R + FV+  +++   +  + +  R  +  M+  IN  MH +V  + LI G      
Sbjct: 108 QPGFRRSEFVFCAILE---ILAQNNLMRSAYWVMERVINANMHRIV--DVLIGGCVSSEV 162

Query: 65  -----------YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
                      Y K   VE+ L+++ +M+   + P V   N +   L +   +  A++++
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M    +     TYNT +D  CK G + +  +L   ++   C      Y+ LI+GL K 
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G+ E A  L   + + GL  +  TYN +I+G+ N G + +A  L  +M  KG +P   T+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           N+ + G  +    S  ++ L  M   N
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANN 369



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 71/128 (55%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +G+ P+   Y+ LI G    G ++RA   F  M   G + NV+TYN+LING CK + 
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++ N ++EM+ KGI P   +Y  L +    +   + AL L+ +M    V  ++ T++ 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 131 FIDGLCKN 138
            +  L K+
Sbjct: 695 LLKQLGKD 702


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 130/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M  +   P+ F Y TL+DG C    ID A  L   M I GC  + VT+N 
Sbjct: 204 VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV 263

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  D+     L   M  KG  P  VTYNT+ +GL    +++ A+ L D M  S 
Sbjct: 264 LINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASK 323

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GL K G  V+   L  +L          AYS LI GL K  K E A 
Sbjct: 324 CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAM 383

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +   G  PN+V Y+ +I G C +G++D+A ++  +M  KG  PN  T+++L+ G 
Sbjct: 384 GLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGF 443

Query: 241 IRNNETSKVVELLHRMDERN 260
            +   + K + +   M + N
Sbjct: 444 FKTGNSQKAIRVWKEMAKNN 463



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 128/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M   ++L+D M  +G  PN   Y+T+I+G CL G++D+A  L   M  + C+ N VTY T
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K     + ++L S +  +G       Y+TL  GLF+  + E A+ L+ +M    
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y+  IDGLC+ G + EA E+   +    C      YS LI G  K G  + A 
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++ + +   +PN + Y+++IHG C DG++ +A  ++  M  +G+ P+ V +++++ G
Sbjct: 454 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 512



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 126/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD M   G  P++  ++ LI+G C  G++ R  +L  +M + GC+ N VTYNT
Sbjct: 239 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 298

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C    ++++++L   M++    P  VTY TL +GL +  +    + L   ++   
Sbjct: 299 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A    Y+T I GL K     EA  L++ +    C+  I  YS LIDGLC+ GKL+ A 
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+   +   G  PN  TY+ +I GF   G   KA  ++ +M      PN + ++ L+ G
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHG 477



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 118/233 (50%), Gaps = 2/233 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  + +RG   N + YSTLI G     + + A  L+  M   GC  N+V Y+ LI+G C
Sbjct: 350 LLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLC 409

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++E+  +  EM++KG  P   TY++L  G F+    + A++++ EM  ++      
Sbjct: 410 REGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEI 469

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y+  I GLC++G + EA  ++  +        + AYS +I GLC  G +E   +LF  +
Sbjct: 470 CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 529

Query: 187 --PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                   P+VVTYNI++   C    +  A DL   M  +G  P+ +T N  +
Sbjct: 530 LCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFL 582



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 3/226 (1%)

Query: 37  DRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML--SKGIRPTVVTY 93
           ++A ELF  M D   C   V ++N+++N   +      +L  Y   +     I P V+++
Sbjct: 132 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 191

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           N +   + ++  V+ A+++F EM       +  TY T +DGLCK   I EA  L   +++
Sbjct: 192 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 251

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
             C      ++ LI+GLCK G +    +L  ++   G +PN VTYN +I+G C  G++DK
Sbjct: 252 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 311

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A  L   M A    PN VT+ TL+ G ++   +   V LL  ++ER
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 357



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 105/206 (50%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           NV+++N +I   CK   V+ ++ ++ EM  +   P V TY TL  GL +  +++ A+ L 
Sbjct: 187 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 246

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           DEMQ       + T+N  I+GLCK G +V   +L   + +  C      Y+ +I+GLC  
Sbjct: 247 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 306

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GKL+ A  L   +     +PN VTY  +I+G    G+      L   +E +G   N   +
Sbjct: 307 GKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAY 366

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           +TL+ G  +  ++ + + L  +M E+
Sbjct: 367 STLISGLFKEEKSEEAMGLWKKMVEK 392



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 37/172 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHN------ 54
           +DEA  +L  M+ +G  PNAF YS+LI GF  TG   +A  ++  M  N C+ N      
Sbjct: 414 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 473

Query: 55  -----------------------------VVTYNTLINGYCKTKDVEESLNLYSEMLSK- 84
                                        VV Y+++I+G C    VE  L L++EML + 
Sbjct: 474 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 533

Query: 85  -GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
              +P VVTYN L   L + + + HA+ L + M       +  T N F++ L
Sbjct: 534 SDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 23/160 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTY 58
           + EA  +   M+ RG+RP+   YS++I G C  G ++   +LF  M    +    +VVTY
Sbjct: 484 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 543

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE---------------- 102
           N L+   CK   +  +++L + ML +G  P ++T N   + L E                
Sbjct: 544 NILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELV 603

Query: 103 --IHQVEH---ALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +H+ +    A K+ + M    +    ST+   I  LCK
Sbjct: 604 VRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 150/294 (51%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + ++M++ G+RP    Y+T++D FC  G++  A +L + M   GC+ N VTYN 
Sbjct: 171 IDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230

Query: 61  LING-----------------------------------YCKTKDVEESLNLYSEMLSKG 85
           L+NG                                   YC+   ++E+  L  EMLS+G
Sbjct: 231 LVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRG 290

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             PT+VTYNT+ +GL +  +V  A KL D M + ++  +  +YNT I G  + G I EA 
Sbjct: 291 AVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 350

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            LF  LR       +  Y+ LIDGLC++G L+ A  L   + + G  P+V T+ I++ GF
Sbjct: 351 LLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGF 410

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G +  A +LF +M  +G+ P+   + T ++G ++  + SK   +   M  R
Sbjct: 411 CKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 464



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 125/237 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL D MI+ G  P+ F ++ L+ GFC  G +  A+ELF  M   G   +   Y T
Sbjct: 381 LDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYIT 440

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G  K  D  ++  +  EML++G  P ++TYN    GL ++  ++ A +L  +M ++ 
Sbjct: 441 RIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 500

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I      G++ +A  +F  +        +  Y+ LI      G+L+ A 
Sbjct: 501 LVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAI 560

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             F  +   G+ PNV+TYN +I+G C   +MD+A+  F +M+AKG++PN  T+  L+
Sbjct: 561 LHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILI 617



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A +LLD+M+ + + P+   Y+TLI G+   G I  A  LF  +   G + +VVTYNT
Sbjct: 311 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNT 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+  D++ ++ L  EM+  G  P V T+  L  G  ++  +  A +LFDEM +  
Sbjct: 371 LIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRG 430

Query: 121 V-----------------------------------AAETSTYNTFIDGLCKNGYIVEAA 145
           +                                     +  TYN FIDGL K G + EA+
Sbjct: 431 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 490

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EL + +           Y+ +I      G L  A  +F  +   G+ P+VVTY ++IH +
Sbjct: 491 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSY 550

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              G++  A   F +M  KGV PN +T+N L+ G  +  +  +  +    M  +
Sbjct: 551 AVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK 604



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 130/252 (51%), Gaps = 4/252 (1%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRA---RELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           Q G + +   Y+ ++D     G +  A    E  VS+ +   + +V+  + L+  Y K  
Sbjct: 74  QTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKS 133

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI-HQVEHALKLFDEMQHSDVAAETSTY 128
            +E+ L ++ +M+SKG+ P +   N +   L +    ++ A ++++ M    +     TY
Sbjct: 134 MLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTY 193

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT +D  CK G + EA +L   ++ + C      Y+ L++GL   G+LE A EL Q + R
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +GL  +  TY+ +I G+C  GQ+D+A  L  +M ++G  P  VT+NT+M G  +    S 
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSD 313

Query: 249 VVELLHRMDERN 260
             +LL  M  +N
Sbjct: 314 ARKLLDVMVNKN 325



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 97/176 (55%)

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++ +  +Y+ M+  GIRPTVVTYNT+     +  +V+ AL+L  +MQ         
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  ++GL  +G + +A EL + +  L  E+    Y  LI G C+ G+L+ A  L + +
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              G +P +VTYN +++G C  G++  A  L   M  K + P+ V++NTL+ G  R
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTR 342



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 4/172 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EAS L+  M+  G+ P+   Y+++I    + G + +AR +F+ M   G   +VVTY  
Sbjct: 486 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTV 545

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y     ++ ++  + EM  KG+ P V+TYN L +GL ++ +++ A K F EMQ   
Sbjct: 546 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKG 605

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           ++    TY   I+  C  G+  EA  L++ +     +  I+  SC    L K
Sbjct: 606 ISPNKYTYTILINENCNLGHWQEALRLYKDM----LDREIQPDSCTHSALLK 653



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 69/128 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +G+ P+   Y+ LI  + + G +  A   F  M   G   NV+TYN LING CK + 
Sbjct: 531 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++   ++EM +KGI P   TY  L +    +   + AL+L+ +M   ++  ++ T++ 
Sbjct: 591 MDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSA 650

Query: 131 FIDGLCKN 138
            +  L K+
Sbjct: 651 LLKHLNKD 658


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E  +LL     RGV  + + Y+TL+DG+C  G + +A E    M  NG     +TYNT
Sbjct: 321 MGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNT 380

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C    ++++L L+  ML +G+ P  ++ +TL  G F+  + E AL L+ E     
Sbjct: 381 LLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARG 440

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    T NT I+GLCKN  + EA ELF  ++   C      Y  LIDG CK+G L  A 
Sbjct: 441 LARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRAT 500

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +  +G +P+V  +N  I G     Q  K +D+ ++M AKG++PN VT+  L+ G 
Sbjct: 501 QIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGW 560

Query: 241 IRNNETSKVVELLHRMDER 259
            +         L   M E+
Sbjct: 561 CKEGNLHDACILYFEMVEK 579



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 132/250 (52%), Gaps = 1/250 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+  L  M + G+  N   Y  ++DG+C  G+ + AR+L  S+ + G   NVVTY  L+ 
Sbjct: 183 AADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVK 242

Query: 64  GYCKTKDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           GYCK   +EE+  +  E+  ++ I    V Y  L +G  +  ++E A ++ DEM  + V 
Sbjct: 243 GYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQ 302

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                YNT I+G CK G + E  +L +        L   +Y+ L+DG C+ G +  A+E 
Sbjct: 303 VNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFET 362

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R G     +TYN +++GFC+ G +D A  L+  M  +GV PN ++ +TL+ G  +
Sbjct: 363 CDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFK 422

Query: 243 NNETSKVVEL 252
             +T + + L
Sbjct: 423 AGKTEQALNL 432



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 26/272 (9%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--------------VSMDINGCMHNV- 55
           M+++G++PN F+ S L+  F   G++D A  +                +++I    H + 
Sbjct: 576 MVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIE 635

Query: 56  -----------VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
                      + +N +I G CK   V ++ NL+ ++  KG  P   TY++L HG     
Sbjct: 636 SLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASG 695

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
            ++ A  L DEM  + +     TYN+ I GLCK+  +  A  LF  L+          Y+
Sbjct: 696 SIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYN 755

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK G    A++L Q + + G+ P V TY I+IHG C  G M++A  L   M   
Sbjct: 756 TLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIEN 815

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            V PN +T+ TL+ G  R      + +L + M
Sbjct: 816 NVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 139/317 (43%), Gaps = 61/317 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---------------ELF-- 43
           M EA  L   M +     ++  Y TLIDG+C  G++ RA                E+F  
Sbjct: 461 MTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNS 520

Query: 44  ------------------VSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                             V M   G   N VTY  LI G+CK  ++ ++  LY EM+ KG
Sbjct: 521 FITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKG 580

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST------------------ 127
           ++P +   + L    +   +V+ A  +  ++  +D+  + S                   
Sbjct: 581 LKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGG 640

Query: 128 --------YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                   +N  I GLCK G + +A  LF  L+V         YS LI G    G ++ A
Sbjct: 641 NHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLA 700

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L   +    L PN+VTYN +I+G C    + +A  LF  +++KG++PN +T+NTL+ G
Sbjct: 701 FGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDG 760

Query: 240 CIRNNETSKVVELLHRM 256
             ++  T++  +L  +M
Sbjct: 761 HCKDGNTTEAFKLKQKM 777



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 111/207 (53%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           +++ +I G C  G +  AR LF  + + G + +  TY++LI+G   +  ++ +  L  EM
Sbjct: 648 MWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEM 707

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           LS  + P +VTYN+L +GL +   V  A+ LF+++Q   ++    TYNT IDG CK+G  
Sbjct: 708 LSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNT 767

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            EA +L + +     +  +  Y+ LI GLC  G +E A +L   +    + PN +TY  +
Sbjct: 768 TEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTL 827

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           I G+   G M     L+ +M   G+ P
Sbjct: 828 IQGYARCGNMKAITKLYNEMHICGLLP 854



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 96/191 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L + +  +G  P+ F YS+LI G   +G ID A  L   M       N+VTYN+LI
Sbjct: 664 DARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLI 723

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CK+ +V  +++L++++ SKGI P  +TYNTL  G  +      A KL  +M    + 
Sbjct: 724 YGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQ 783

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I GLC  GY+ EA +L   +     +     Y  LI G  + G ++   +L
Sbjct: 784 PTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKL 843

Query: 183 FQSLPRVGLMP 193
           +  +   GL+P
Sbjct: 844 YNEMHICGLLP 854



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 83/153 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L D M+   + PN   Y++LI G C +  + RA  LF  +   G   N +TYNT
Sbjct: 697 IDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNT 756

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  +  E+  L  +M+ +GI+PTV TY  L HGL     +E A+KL D+M  ++
Sbjct: 757 LIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENN 816

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           V     TY T I G  + G +    +L+  + +
Sbjct: 817 VDPNFITYWTLIQGYARCGNMKAITKLYNEMHI 849



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 1/252 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + D M + G R      + L++     G+I  A  +F  M   G + +  T   
Sbjct: 110 LKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAI 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +   YC+   V  + +   EM   G+   +V Y+ +  G   I Q E A KL   +Q   
Sbjct: 170 MAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV-LKCELGIEAYSCLIDGLCKIGKLETA 179
           ++    TY   + G CK G + EA ++ + ++   K  +   AY  LI+G C+ G++E A
Sbjct: 230 LSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDA 289

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   +   G+  N+  YN MI+G+C  G+M +   L    E +GV  +  ++NTL+ G
Sbjct: 290 NRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDG 349

Query: 240 CIRNNETSKVVE 251
             R    +K  E
Sbjct: 350 YCRKGFMTKAFE 361



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 101/187 (54%), Gaps = 1/187 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +  +++ L+  +     ++++L ++ EM   G R T+ + N L + L +   +  A+ +F
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            +M+ +    +  T        C++G +  AA+  + +  +  ++ + AY  ++DG C+I
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVT 232
           G+ E A +L  SL   GL PNVVTY +++ G+C +G+M++A  +  ++ E + +  + V 
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272

Query: 233 FNTLMLG 239
           +  L+ G
Sbjct: 273 YGALING 279



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +A  +  L+      G++  A  +F  M   G    + + N L+N   +  D+  ++ ++
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M   G  P   T   +        +V HA     EM+   +      Y+  +DG C+ 
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR-VGLMPNVVT 197
           G    A +L  +L+V      +  Y+ L+ G CK G++E A ++ + +     ++ + V 
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  +I+G+C  G+M+ A+ +  +M   GV  N   +NT++ G  +     +V +LL   +
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANE 332

Query: 258 ER 259
            R
Sbjct: 333 YR 334



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 66/140 (47%)

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           + D +   ++++  +      G + +A  +F  +        + + + L++ L + G + 
Sbjct: 87  YKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIG 146

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           TA  +FQ +   G +P+  T  IM   +C DG++  A D   +ME  G+  N V ++ +M
Sbjct: 147 TAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVM 206

Query: 238 LGCIRNNETSKVVELLHRMD 257
            G  R  +T    +LLH + 
Sbjct: 207 DGYCRIGQTEVARKLLHSLQ 226



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 29/52 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM 52
           M+EA +LLD MI+  V PN   Y TLI G+   G +    +L+  M I G +
Sbjct: 802 MEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLL 853


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL  +M   GV P+ F +S LI+G C  G +D    LF  M   G + N VT+ T
Sbjct: 299 VEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTT 358

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V+ +L  +  ML++G+RP +VTYN L +GL ++  ++ A +L +EM  S 
Sbjct: 359 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASG 418

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+ T IDG CK+G +  A E+ R +     EL   A++ LI GLC+ G++  A 
Sbjct: 419 LKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAG 478

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   G  P+  TY ++I  FC  G +     L  +M++ G  P  VT+N LM G 
Sbjct: 479 RMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGL 538

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL  M
Sbjct: 539 CKQGQMKNAKMLLDAM 554



 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 134/249 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE S L D M  RG+ PN   ++TLIDG C  G++D A + F  M   G   ++VTYN 
Sbjct: 334 LDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNA 393

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  D++E+  L +EM + G++P  +T+ TL  G  +   +E AL++   M    
Sbjct: 394 LINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEG 453

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +   I GLC+ G + +A  +   +     +     Y+ +ID  CK G ++  +
Sbjct: 454 IELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGF 513

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   G +P VVTYN +++G C  GQM  A  L   M   GVAPN +T+N L+ G 
Sbjct: 514 KLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGH 573

Query: 241 IRNNETSKV 249
            ++  +  V
Sbjct: 574 SKHGSSVDV 582



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 127/246 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G  P  + ++ L+ GFC  G++  AR +F  +   G    VV++NTLI+G CK+ D
Sbjct: 239 VLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGD 298

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           VEE   L   M S+G+ P V T++ L +GL +  +++    LFDEM    +     T+ T
Sbjct: 299 VEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTT 358

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK G +  A + F+ +        +  Y+ LI+GLCK+G L+ A  L   +   G
Sbjct: 359 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASG 418

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +T+  +I G C DG M+ A ++   M  +G+  + V F  L+ G  R        
Sbjct: 419 LKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAG 478

Query: 251 ELLHRM 256
            +L  M
Sbjct: 479 RMLTDM 484



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 130/228 (57%), Gaps = 8/228 (3%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           EI+R+  L++ +  +G    +  +N L++G+CK  DV  +  ++ E+  +G+RPTVV++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           TL  G  +   VE   +L   M+   V  +  T++  I+GLCK G + E + LF  +   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEM--- 344

Query: 155 KCELGIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
            C  G+      ++ LIDG CK GK++ A + FQ +   G+ P++VTYN +I+G C  G 
Sbjct: 345 -CGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 403

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + +A  L  +M A G+ P+ +TF TL+ GC ++ +    +E+  RM E
Sbjct: 404 LKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVE 451



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 3/175 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  +   M++ G+  +   ++ LI G C  G +  A  +   M   G   +  TY  
Sbjct: 439 MESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTM 498

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +CK  DV+    L  EM S G  P VVTYN L +GL +  Q+++A  L D M +  
Sbjct: 499 VIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVG 558

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           VA    TYN  +DG  K+G  V+  ++F + + L  +    +Y+ L++   K  K
Sbjct: 559 VAPNDITYNILLDGHSKHGSSVD-VDIFNSEKGLVTDYA--SYTALVNESSKTSK 610


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 131/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   +M + N
Sbjct: 319 DGNCKEGDLETAFEYRKKMIKEN 341



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 53/257 (20%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSK-----------GIRPTVVTYNT---LFH 98
           HN+ +Y T+I+  C  + + E+  L   ++S+            I  T  T  +   +F 
Sbjct: 11  HNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 70

Query: 99  GLFEIH------------------------------QVEHALKL---------FDEMQHS 119
           GL   +                               +EH +KL         ++E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
              A    +N  +    K G I  A  +F  +        + +++ L++G  K+G L+  
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L  ++   G+ P+V TY+++I+G C + +MD A++LF +M   G+ PN VTF TL+ G
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 240 CIRNNETSKVVELLHRM 256
             +N      +E+  +M
Sbjct: 251 HCKNGRVDLAMEIYKQM 267


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 135/253 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS + D  +  G+ PN   Y  LI+GFC  G+I+ A  L   M + G  HN + +NT+I+
Sbjct: 257 ASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID 316

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+   V+++L + + M   GI+  V TYNTL  GL  ++++E A KL   M  + V +
Sbjct: 317 GYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVES 376

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y T I    K G +VEA  LFR +        +  Y+ +IDG  K G +  A    
Sbjct: 377 NYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFK 436

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + + GL+P+V TY  ++HG C +G++D A  LF +M+ +G  PN V +  L+ G  + 
Sbjct: 437 KEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKE 496

Query: 244 NETSKVVELLHRM 256
             + +  +    M
Sbjct: 497 GRSEEAFQFYDNM 509



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 128/256 (50%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           + +L  M   GV P    Y+ L+DG    G+I +   +F  +       +V  Y+ +IN 
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           YC+  +V  +  ++ E +  GI P   TY  L +G  +I Q+E A  L  +MQ   V   
Sbjct: 248 YCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHN 307

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
              +NT IDG C++G + +A E+   +  +  +L +  Y+ L  GLC++ ++E A +L  
Sbjct: 308 QIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLH 367

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +   G+  N V+Y  +I     +G M +A  LF DME KG  P+ VT+N ++ G I++ 
Sbjct: 368 IMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSG 427

Query: 245 ETSKVVELLHRMDERN 260
              +       M+++ 
Sbjct: 428 SIREAERFKKEMEKKG 443



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 117/235 (49%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           S ++DGFC  G +D AR L   M  +G   N   YN L++ Y + K+      +  EM S
Sbjct: 137 SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMES 196

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G+ PTV TY  L  GL     +     +FDE++  +VA +   Y+  I+  C+ G +  
Sbjct: 197 GGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRR 256

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A+E+F        E     Y  LI+G CKIG++E A  L   +   G+  N + +N MI 
Sbjct: 257 ASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID 316

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G+C  G +DKA ++   ME  G+  +  T+NTL  G  R N      +LLH M E
Sbjct: 317 GYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 112/213 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +  +M + G++ + + Y+TL  G C    ++ A++L   M  NG   N V+Y T
Sbjct: 324 VDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTT 383

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + K  D+ E+  L+ +M  KG RP+VVTYN +  G  +   +  A +   EM+   
Sbjct: 384 LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKG 443

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   + G C NG +  A  LF  ++    +  + AY+ LI GL K G+ E A+
Sbjct: 444 LVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAF 503

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           + + ++   GL P+   Y++++     D + D+
Sbjct: 504 QFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDE 536



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 35/204 (17%)

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T ++ + +  G  +  +++ A +L DEM    V      YN  +D   +       AE+ 
Sbjct: 132 TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVL 191

Query: 149 RTLRVLKCELGIEAYSCLIDGL-----------------------------------CKI 173
           + +     E  +  Y+ L+DGL                                   C+ 
Sbjct: 192 KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRA 251

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G +  A E+F      G+ PN  TY  +I+GFC  GQ++ A  L  DM+ +GV  N + F
Sbjct: 252 GNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIF 311

Query: 234 NTLMLGCIRNNETSKVVELLHRMD 257
           NT++ G  R+    K +E+   M+
Sbjct: 312 NTMIDGYCRHGMVDKALEIKAVME 335



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 3/124 (2%)

Query: 139 GYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           G+++ AAEL R   +  C   I   + S ++DG CK G+++ A  L   +PR G+  N  
Sbjct: 111 GHLLPAAELLRKA-LASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNAC 169

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            YN ++  +       +  ++  +ME+ GV P   T+  L+ G     + SKV  +   +
Sbjct: 170 CYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEI 229

Query: 257 DERN 260
             +N
Sbjct: 230 KRKN 233


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 140/258 (54%), Gaps = 2/258 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +   ++ + M  RG+ P+  +Y+ LID  C  G++ +A  +   M   G   NVVTYN L
Sbjct: 181 ESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVL 240

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD- 120
           IN  CK   V E+L+L   M  KG++P VVTYNTL  GL  + +++ A+ L +EM   + 
Sbjct: 241 INSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGET 300

Query: 121 -VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V  +  T+N+ I GLCK G++ +A ++   +    C   + A++ LI GL ++ K++ A
Sbjct: 301 RVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKA 360

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL   +   GL P+  TY+I+I+GFC   Q+++A     +M  +G+ P  V +  L+  
Sbjct: 361 MELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKA 420

Query: 240 CIRNNETSKVVELLHRMD 257
                   +  +L + MD
Sbjct: 421 MCDQGMMGQARDLFNEMD 438



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 138/262 (52%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQ--RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           MDEA  LL+ M+Q    VRP+   ++++I G C  G + +A ++   M  NGC  N+V +
Sbjct: 285 MDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAF 344

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI G  +   V++++ L  EM S G++P   TY+ L +G  ++ QVE A     EM+H
Sbjct: 345 NLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRH 404

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +  E   Y   +  +C  G + +A +LF  +    C+L   AYS +I G  K G+ + 
Sbjct: 405 QGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKI 463

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A E  + +   GL+P+ VTY+I I+ F   G +  A  +   M A G  P+   F++L+ 
Sbjct: 464 AEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQ 523

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G     +T K++EL   M  ++
Sbjct: 524 GYGAKGDTEKILELTREMTAKD 545



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 131/256 (51%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  M   GVRP+   Y TLI G C   ++D A EL   M  +G   NVV Y+ L+
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCKT   E    ++ EM  +GI P VV Y  L   L    +V+ A ++ D M    + 
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I+ +CK G + EA +L + +     +  +  Y+ LI GL  + +++ A  L
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291

Query: 183 FQSLPR--VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +    + P+++T+N +IHG C  G M +A  +   M   G   N V FN L+ G 
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351

Query: 241 IRNNETSKVVELLHRM 256
           +R ++  K +EL+  M
Sbjct: 352 LRVHKVKKAMELMDEM 367



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 122/226 (53%), Gaps = 4/226 (1%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           RPNA  Y+TL+   C      +A  L  SM   G   +VVTY TLI G C   DV+ ++ 
Sbjct: 91  RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVE 150

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L +EM   GI P VV Y+ L HG  +  + E   K+F+EM    +  +   Y   ID LC
Sbjct: 151 LLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLC 210

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           ++G + +AA +   +     E  +  Y+ LI+ +CK G +  A +L +++   G+ P+VV
Sbjct: 211 RHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVV 270

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDM---EAKGVAPNCVTFNTLMLG 239
           TYN +I G  +  +MD+A  L  +M   E + V P+ +TFN+++ G
Sbjct: 271 TYNTLITGLSSVLEMDEAMALLEEMMQGETR-VRPDLMTFNSVIHG 315



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 122/241 (50%), Gaps = 3/241 (1%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTYNTLINGYCKTKDVEESL 75
           +A  Y+T++   C  G +D A  L   M          N ++Y TL+   C  +   +++
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L   M   G+RP VVTY TL  GL +   V+ A++L +EM  S +      Y+  + G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK G      ++F  +     E  +  Y+ LID LC+ GK++ A  +   +   GL PNV
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTYN++I+  C +G + +A DL  +M  KGV P+ VT+NTL+ G     E  + + LL  
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 256 M 256
           M
Sbjct: 295 M 295


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 133/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV P+ + YS LI+G C   ++D A +LF  M   G + N VT+ T
Sbjct: 193 LDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P +VTYN L +GL +   ++ A  L DEM    
Sbjct: 253 LIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 133/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 133 ILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G+ P V TY+ L +GL +  +++ A KLFDEM    +   + T+ T
Sbjct: 193 LDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG++  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 253 LIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 145 FNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMH 204

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A +LF  +           ++ LIDG CK G ++
Sbjct: 205 ASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVD 264

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P++VTYN +I+G C  G + +AHDL  +M   G+ P+ +T+ TL+
Sbjct: 265 LAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLI 324

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E    M + N
Sbjct: 325 DGCCKEGDLDTAFEHRKMMIQEN 347


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 135/255 (52%), Gaps = 11/255 (4%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++P+  +YS +IDG    G    A+ LF+ M   G   ++VTY+ +ING+C +    E+ 
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EML + I P VVT++ L + L +   +  A  L  EM  S V     T NT +DGL
Sbjct: 208 RLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGL 267

Query: 136 CKNGYIVEAAELFRTLRVL-----------KCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           C +G + +A E+F+ ++               E  ++ Y+ LI GL   GK   A EL++
Sbjct: 268 CDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYE 327

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +P  G++P+ VTY+ MI+G C   ++D+A  +F  M +K  +PN VTFNTL+ G  +  
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG 387

Query: 245 ETSKVVELLHRMDER 259
                +EL   M  R
Sbjct: 388 MVDDGLELFCEMGRR 402



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 132/248 (53%), Gaps = 11/248 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M  +G+ P+   YS +I+GFC +G+   A+ L   M +     +VVT++ LI
Sbjct: 170 DAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLI 229

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS--- 119
           N   K  D+  + +L  EM+S G+ P VVT NTL  GL +  +++ AL++F  MQ S   
Sbjct: 230 NALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD 289

Query: 120 --------DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
                    V  +  TYN  I GL   G  +EA EL+  +           YS +I+GLC
Sbjct: 290 IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLC 349

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K  +L+ A ++F S+      PN+VT+N +I G+C  G +D   +LF +M  +G+  N +
Sbjct: 350 KQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAI 409

Query: 232 TFNTLMLG 239
           T+ TL+ G
Sbjct: 410 TYITLIRG 417



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 139/265 (52%), Gaps = 11/265 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RLL  M+ R + P+   +S LI+     G+++ A++L   M  +G   NVVT NTL+
Sbjct: 205 EAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264

Query: 63  NGYCKTKDVEESLNLYSEMLSK-----------GIRPTVVTYNTLFHGLFEIHQVEHALK 111
           +G C +  ++++L ++  M              G+ P V TYN L  GL    +   A +
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEE 324

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           L++EM H  +  +T TY++ I+GLCK   + EA ++F ++        I  ++ LI G C
Sbjct: 325 LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC 384

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G ++   ELF  + R G++ N +TY  +I GF   G ++ + D+F +M + GV P+ +
Sbjct: 385 KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T   ++ G     E  + + +L  +
Sbjct: 445 TIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 144/270 (53%), Gaps = 12/270 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD-INGCMHNVVTYNTL 61
           EA  LLD M++ G++PN   Y T++DG C  G+   A  L   M+ ++    +VV Y+ +
Sbjct: 99  EAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAI 158

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     ++ NL+ EM  KGI P +VTY+ + +G     +   A +L  EM    +
Sbjct: 159 IDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKI 218

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  T++  I+ L K G +  A +L + +        +   + L+DGLC  GKL+ A E
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278

Query: 182 LFQSLPRV-----------GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           +F+++ +            G+ P+V TYNI+I G  N+G+  +A +L+ +M  +G+ P+ 
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           VT+++++ G  + +   +  ++   M  ++
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKS 368



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 131/248 (52%), Gaps = 7/248 (2%)

Query: 12  IQRGVRPNAFVYS--TLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           I+ G++    +YS   LI  FC   ++  A   F  +   G    +VT+NTL++G C   
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            V E+L+L+ +M     +P VVT+ TL +GL    +V  A+ L D M    +     TY 
Sbjct: 65  RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           T +DG+CK G  V A  L R +  L   +  +  YS +IDGL K G+   A  LF  +  
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P++VTY+ MI+GFC+ G+  +A  L  +M  + ++P+ VTF+ L+   ++  + + 
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 249 VVELLHRM 256
             +LL  M
Sbjct: 241 AQDLLQEM 248



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 79/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++I+G C    +D A ++F SM       N+VT+NTLI
Sbjct: 321 EAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLI 380

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYCK   V++ L L+ EM  +GI    +TY TL  G  ++  +  +L +F EM  S V 
Sbjct: 381 TGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVY 440

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + GL     +  A  +   L++
Sbjct: 441 PDTITIRNMLTGLWSKEELKRALAMLEELQM 471



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 70/119 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   PN   ++TLI G+C  G +D   ELF  M   G + N +TY T
Sbjct: 354 LDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYIT 413

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  ++  SL+++ EM+S G+ P  +T   +  GL+   +++ AL + +E+Q S
Sbjct: 414 LIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 4/138 (2%)

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++N  I   C    +  A   F  L  L     +  ++ L+ GLC   ++  A 
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + +    PNVVT+  +++G C +G++ +A  L   M   G+ PN +T+ T++ G 
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 127 CKMGDTVSALNLLRKMEE 144



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++ ++NI+I  FC+  ++  A   F  +   G  P  VTFNTL+ G    +  S+ ++L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 254 HRMDERN 260
           H+M + N
Sbjct: 74  HQMCKPN 80


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 138/258 (53%), Gaps = 2/258 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R  D M ++G+  +   Y+T+I+G C   E++ A +L   M       + VTY  LI+
Sbjct: 380 ARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLID 439

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK   + E+  +++ M+ +G+ P VVTY  L  GL +   V+ A +L  EM +  +  
Sbjct: 440 GYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL 499

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ I+GLCK GY+ +A      +     +  +  Y+ LID LCK G L+ A  L 
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLL 559

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           Q +   G+ P +VTYN++++GFC  G+++    L   M  K + PN  T+N+LM   CI 
Sbjct: 560 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIE 619

Query: 243 NNETSKVVELLHRMDERN 260
           NN  S   E+   M  R+
Sbjct: 620 NNMKS-TTEIYKGMRSRD 636



 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 132/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+++ M+QR V  +  +Y+T++ GFC  G++  AR  F  M   G   + VTY T
Sbjct: 342 ISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTT 401

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+  ++EE+  L  EM ++ +    VTY  L  G  +  ++  A ++ + M    
Sbjct: 402 MINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRG 461

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY    DGLCK G +  A EL   +     EL    Y+ LI+GLCK G LE A 
Sbjct: 462 VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAM 521

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +    L P+V TY  +I   C  G +D+AH L  +M  KG+ P  VT+N LM G 
Sbjct: 522 RTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 581

Query: 241 IRNNETSKVVELLHRMDERN 260
             +       +LL  M E+N
Sbjct: 582 CMSGRVEGGKKLLDWMLEKN 601



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 127/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +LLD M+  GV PNA VY++++   C  G I  A  +   M     + +   Y T
Sbjct: 307 LENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTT 366

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G+C   D+  +   + EM  KG+    VTY T+ +GL    ++E A KL  EM    
Sbjct: 367 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARR 426

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   IDG CK G + EA ++   +        +  Y+ L DGLCK G ++ A 
Sbjct: 427 LDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAAN 486

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL  N  TYN +I+G C  G +++A     DM+   + P+  T+ TL+   
Sbjct: 487 ELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDAL 546

Query: 241 IRNNETSKVVELLHRM 256
            ++ +  +   LL  M
Sbjct: 547 CKSGDLDRAHSLLQEM 562



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +LL  M  R +  +   Y+ LIDG+C  G++  A ++  +M   G   NVVTY  
Sbjct: 412 LEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTA 471

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G CK  DV+ +  L  EM +KG+     TYN+L +GL +   +E A++   +M  + 
Sbjct: 472 LTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTAC 531

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T ID LCK+G +  A  L + +     +  I  Y+ L++G C  G++E   
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 591

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   +    + PN  TYN ++  +C +  M    +++  M ++ V PN  T+N L+ G
Sbjct: 592 KLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKG 650



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 3/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A +L D M      P+   Y  LI G C  GE++ A +L   M   G   N   Y +
Sbjct: 275 VKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTS 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   C    + ++L +  +M+ + +      Y T+  G      +  A + FDEMQ   
Sbjct: 332 VVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKG 391

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  TY T I+GLC+   + EA +L + +   + ++    Y+ LIDG CK GK+  A+
Sbjct: 392 LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAF 451

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++  ++ + G+ PNVVTY  +  G C  G +  A++L  +M  KG+  N  T+N+L+ G 
Sbjct: 452 QMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGL 511

Query: 241 IRNNETSKVVELLHRMD 257
            +     + +  +  MD
Sbjct: 512 CKAGYLEQAMRTMADMD 528



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 121/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA ++ + M+QRGV PN   Y+ L DG C  G++  A EL   M   G   N  TYN+
Sbjct: 447 MAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 506

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   +E+++   ++M +  ++P V TY TL   L +   ++ A  L  EM    
Sbjct: 507 LINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKG 566

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  ++G C +G +    +L   +           Y+ L+   C    +++  
Sbjct: 567 IKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTT 626

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+++ +    + PN  TYNI+I G C    M +A     +M  KG      +++ L+   
Sbjct: 627 EIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLL 686

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +  EL H M
Sbjct: 687 NKKKKFVEARELFHDM 702



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 124/291 (42%), Gaps = 46/291 (15%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           ++ LL  + Q G+ P+    + ++    L    D A ELF  +       NV +YN L+ 
Sbjct: 216 SAPLLRRLRQYGISPSPEACNAVLSRLPL----DEAIELFQELP----HKNVCSYNILLK 267

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    V+++  L+ EM S    P VVTY  L HG   + ++E+A+KL DEM    V  
Sbjct: 268 ALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEP 324

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             + Y + +  LC  G+I +A  +   +   K  L    Y+ ++ G C  G L +A   F
Sbjct: 325 NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWF 384

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-------------------- 223
             + R GL  + VTY  MI+G C   ++++A  L  +M A                    
Sbjct: 385 DEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKR 444

Query: 224 ---------------KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
                          +GV PN VT+  L  G  +  +     ELLH M  +
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK 495



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 96/202 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R +  M    ++P+ + Y+TLID  C +G++DRA  L   M   G    +VTYN 
Sbjct: 517 LEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNV 576

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C +  VE    L   ML K I P   TYN+L       + ++   +++  M+  D
Sbjct: 577 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 636

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    +TYN  I G CK   + EA      +      L   +YS LI  L K  K   A 
Sbjct: 637 VGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAR 696

Query: 181 ELFQSLPRVGLMPNVVTYNIMI 202
           ELF  + + GL      Y+  I
Sbjct: 697 ELFHDMRKEGLTAESDVYDFYI 718


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 135/255 (52%), Gaps = 11/255 (4%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++P+  +YS +IDG    G    A+ LF+ M   G   ++VTY+ +ING+C +    E+ 
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EML + I P VVT++ L + L +   +  A  L  EM  S V     T NT +DGL
Sbjct: 208 RLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGL 267

Query: 136 CKNGYIVEAAELFRTLRVL-----------KCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           C +G + +A E+F+ ++               E  ++ Y+ LI GL   GK   A EL++
Sbjct: 268 CDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYE 327

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +P  G++P+ VTY+ MI+G C   ++D+A  +F  M +K  +PN VTFNTL+ G  +  
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG 387

Query: 245 ETSKVVELLHRMDER 259
                +EL   M  R
Sbjct: 388 MVDDGLELFCEMGRR 402



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 132/248 (53%), Gaps = 11/248 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M  +G+ P+   YS +I+GFC +G+   A+ L   M +     +VVT++ LI
Sbjct: 170 DAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLI 229

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS--- 119
           N   K  D+  + +L  EM+S G+ P VVT NTL  GL +  +++ AL++F  MQ S   
Sbjct: 230 NALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD 289

Query: 120 --------DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
                    V  +  TYN  I GL   G  +EA EL+  +           YS +I+GLC
Sbjct: 290 IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLC 349

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K  +L+ A ++F S+      PN+VT+N +I G+C  G +D   +LF +M  +G+  N +
Sbjct: 350 KQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAI 409

Query: 232 TFNTLMLG 239
           T+ TL+ G
Sbjct: 410 TYITLIRG 417



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 11/265 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RLL  M+ R + P+   +S LI+     G+++ A++L   M  +G   NVVT NTL+
Sbjct: 205 EAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264

Query: 63  NGYCKTKDVEESLNLYSEMLSK-----------GIRPTVVTYNTLFHGLFEIHQVEHALK 111
           +G C +  ++++L ++  M              G+ P V TYN L  GL    +   A +
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEE 324

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           L++EM H  +  +T TY++ I+GLCK   + EA ++F ++        I  ++ LI G C
Sbjct: 325 LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC 384

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G ++   ELF  + R G++ N +TY  +I GF   G ++ + D+F +M + GV P+ +
Sbjct: 385 KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T   ++ G     E  K + +L  +
Sbjct: 445 TIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 144/270 (53%), Gaps = 12/270 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD-INGCMHNVVTYNTL 61
           EA  LLD M++ G++PN   Y T++DG C  G+   A  L   M+ ++    +VV Y+ +
Sbjct: 99  EAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAI 158

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     ++ NL+ EM  KGI P +VTY+ + +G     +   A +L  EM    +
Sbjct: 159 IDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKI 218

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  T++  I+ L K G +  A +L + +        +   + L+DGLC  GKL+ A E
Sbjct: 219 SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALE 278

Query: 182 LFQSLPRV-----------GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           +F+++ +            G+ P+V TYNI+I G  N+G+  +A +L+ +M  +G+ P+ 
Sbjct: 279 MFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           VT+++++ G  + +   +  ++   M  ++
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKS 368



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 131/248 (52%), Gaps = 7/248 (2%)

Query: 12  IQRGVRPNAFVYS--TLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           I+ G++    +YS   LI  FC   ++  A   F  +   G    +VT+NTL++G C   
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            V E+L+L+ +M     +P VVT+ TL +GL    +V  A+ L D M    +     TY 
Sbjct: 65  RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           T +DG+CK G  V A  L R +  L   +  +  YS +IDGL K G+   A  LF  +  
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P++VTY+ MI+GFC+ G+  +A  L  +M  + ++P+ VTF+ L+   ++  + + 
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 249 VVELLHRM 256
             +LL  M
Sbjct: 241 AQDLLQEM 248



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 80/151 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M  RG+ P+   YS++I+G C    +D A ++F SM       N+VT+NTLI
Sbjct: 321 EAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLI 380

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYCK   V++ L L+ EM  +GI    +TY TL  G  ++  +  +L +F EM  S V 
Sbjct: 381 TGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVY 440

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
            +T T    + GL     + +A  +   L++
Sbjct: 441 PDTITIRNMLTGLWSKEELKKALAMLEELQM 471



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 70/119 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+++ D M  +   PN   ++TLI G+C  G +D   ELF  M   G + N +TY T
Sbjct: 354 LDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYIT 413

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI G+ K  ++  SL+++ EM+S G+ P  +T   +  GL+   +++ AL + +E+Q S
Sbjct: 414 LIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 4/138 (2%)

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++N  I   C    +  A   F  L  L     +  ++ L+ GLC   ++  A 
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  + +    PNVVT+  +++G C +G++ +A  L   M   G+ PN +T+ T++ G 
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +T   + LL +M+E
Sbjct: 127 CKMGDTVSALNLLRKMEE 144



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++ ++NI+I  FC+  ++  A   F  +   G  P  VTFNTL+ G    +  S+ ++L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 254 HRMDERN 260
           H+M + N
Sbjct: 74  HQMCKPN 80


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 131/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EM+  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 136/260 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+++M +RG  PNA V++ ++D  C  G    A     +M   G    +VTYN 
Sbjct: 26  LTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTIVTYNI 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK + +  +L +  EM  +G  P  VTYNT  HGL +  +V+ AL LF  M    
Sbjct: 86  LIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKK 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y T IDGLC+ G + EA  L   +    C      Y+ ++  LCK  ++  A 
Sbjct: 146 IRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAH 205

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G++P+ +T+ +M+ G+C   ++D A  L   M++ G+AP  V +NTL+   
Sbjct: 206 KLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDAL 265

Query: 241 IRNNETSKVVELLHRMDERN 260
            R    S+   LL  M  R 
Sbjct: 266 NRAGRVSEAYRLLQEMISRG 285



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 122/246 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++G  P    +  L+DG C    +  A EL   M   GC  N + +N +++  CK   
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             E+      M S G+ PT+VTYN L  G  +  ++  AL++  EM          TYNT
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F+ GLCK G + +A  LFR +   K  L +  Y+ LIDGLC+ GKL  A+ L   +   G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +P    YN ++   C   ++++AH LF  M   G+ P+ +TF  ++ G  R +     +
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 251 ELLHRM 256
            LL +M
Sbjct: 241 LLLQQM 246



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 86/177 (48%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M  KG  PTVVT+  L  GL + +++  A +L + M           +N  +D LCK G 
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
             EA     T+R +     I  Y+ LIDG CK  KL  A E+ Q +   G  PN VTYN 
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
            +HG C  G++D A  LF  M  K +  +   + TL+ G  +  + ++   LL  M+
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME 177



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 72/134 (53%)

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+   +DGLCK   + +A EL   +    C      ++ ++D LCK G+   A+   +++
Sbjct: 12  TFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETM 71

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +G+ P +VTYNI+I GFC + ++ +A ++  +M  +G  PN VT+NT + G  +  + 
Sbjct: 72  RSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV 131

Query: 247 SKVVELLHRMDERN 260
              + L   M E+ 
Sbjct: 132 DDALALFRAMTEKK 145



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LLD M   G  P    Y+ ++   C    I+ A +LF  M  +G + + +T+  
Sbjct: 166 LAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGM 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ GYC+   ++++L L  +M S G+ P  V YNTL   L    +V  A +L  EM    
Sbjct: 226 MVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRG 285

Query: 121 VAAETSTY 128
           ++  + TY
Sbjct: 286 LSPNSRTY 293



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 55/105 (52%)

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C   +  +  L+DGLCK  +L  A+EL + +   G  PN + +N ++   C +G+  +A+
Sbjct: 6   CIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAY 65

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
                M + GV+P  VT+N L+ G  +  +  + +E+L  M  R 
Sbjct: 66  GYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRG 110


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 134/239 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 174 LDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 233

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 293

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T I+G CK G +  A E  + +      L   AY+ LI G C+ G+   A 
Sbjct: 294 LKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAE 353

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G +     L  +M+  G  P+ VT+N LM G
Sbjct: 354 KMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 133/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 114 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGD 173

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 174 LDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 233

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 293

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I+G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 294 LKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAE 353

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 354 KMLREM 359



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G      ++    L   M 
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXML 185

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AH L  +M  KG+ P+ +T+ TL+
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 305

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 306 NGCCKEGDLDSAFEHRKRMIQEN 328



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 50  RSDIYVFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 109

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 170 RXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 229

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 289


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 143/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M   GV  N   Y+++I+G C  G +    EL   M   G + + VTYNT
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+CK  ++ + L L SEM+ KG+ P VVTY TL + + +   +  A+++FD+M+   
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T IDG C+ G + EA ++   + V      +  Y+ L+ G C +G+++ A 
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAV 437

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   GL P+VV+Y+ +I GFC + ++ KA  +  +M  KGV P+ VT+++L+ G 
Sbjct: 438 GILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL 497

Query: 241 IRNNETSKVVELLHRMDER 259
               +  +  +L   M  R
Sbjct: 498 CLQQKLVEAFDLFREMMRR 516



 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 132/249 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+ PN   Y+TLID  C   ++  A  L  +M + G   N+++YN++ING C    
Sbjct: 233 MEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGR 292

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E   L  EM  KG+ P  VTYNTL +G  +   +   L L  EM    ++    TY T
Sbjct: 293 MSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTT 352

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+ +CK G +  A E+F  +RV         Y+ LIDG C+ G +  A+++   +   G
Sbjct: 353 LINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+VVTYN ++HG+C  G++ +A  +   M  +G+ P+ V+++T++ G  R  E  K  
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAF 472

Query: 251 ELLHRMDER 259
           ++   M E+
Sbjct: 473 QMKEEMVEK 481



 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 136/258 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A R+   M++ GV PN + Y+ +I G    G++++       M+  G   NVVTYNTL
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK K V+E++ L   M   G+   +++YN++ +GL    ++    +L +EM+   +
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYNT ++G CK G + +   L   +        +  Y+ LI+ +CK G L  A E
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  +   GL PN  TY  +I GFC  G M++A+ +  +M   G +P+ VT+N L+ G  
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 242 RNNETSKVVELLHRMDER 259
                 + V +L  M ER
Sbjct: 429 FLGRVQEAVGILRGMVER 446



 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 136/249 (54%), Gaps = 1/249 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  + D M  RG+RPN   Y+TLIDGFC  G ++ A ++   M ++G   +VVTYN 
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC    V+E++ +   M+ +G+ P VV+Y+T+  G     ++  A ++ +EM    
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +T TY++ I GLC    +VEA +LFR +           Y+ LI+  C  G+L  A 
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G +P+ VTY+++I+G     +   A  L L +  +   P+ VT+NTL+  C
Sbjct: 543 RLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENC 602

Query: 241 IRNNETSKV 249
             NNE   V
Sbjct: 603 -SNNEFKSV 610



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 135/250 (54%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M+ +G+ PN   Y+TLI+  C  G + RA E+F  M + G   N  TY TLI+G+C
Sbjct: 334 LLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFC 393

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   + E+  + SEM+  G  P+VVTYN L HG   + +V+ A+ +   M    +  +  
Sbjct: 394 QKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVV 453

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +Y+T I G C+   + +A ++   +           YS LI GLC   KL  A++LF+ +
Sbjct: 454 SYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREM 513

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R GL P+ VTY  +I+ +C DG++ KA  L  +M  +G  P+ VT++ L+ G  +   T
Sbjct: 514 MRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKART 573

Query: 247 SKVVELLHRM 256
                LL ++
Sbjct: 574 KVAKRLLLKL 583



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E   L++ M  +G+ P+   Y+TL++GFC  G + +   L   M   G   NVVTY T
Sbjct: 293 MSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTT 352

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK  ++  ++ ++ +M  +G+RP   TY TL  G  +   +  A K+  EM  S 
Sbjct: 353 LINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYN  + G C  G + EA  + R +        + +YS +I G C+  +L  A+
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAF 472

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + +   G++P+ VTY+ +I G C   ++ +A DLF +M  +G+ P+ VT+ +L+   
Sbjct: 473 QMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAY 532

Query: 241 IRNNETSKVVELLHRMDER 259
             + E SK + L   M +R
Sbjct: 533 CVDGELSKALRLHDEMVQR 551



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 5/243 (2%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT-----KDVEESLN 76
           V+  ++      G + +A  L    + +G    V++YN +++   +      +D +++  
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           ++ +M+  G+ P V TYN +  G+     +E  L    +M+   ++    TYNT ID  C
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K   + EA  L R + V      + +Y+ +I+GLC  G++    EL + +   GL+P+ V
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TYN +++GFC +G + +   L  +M  KG++PN VT+ TL+    +    S+ VE+  +M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 257 DER 259
             R
Sbjct: 374 RVR 376



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 18/273 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L  M++RG+ P+   YST+I GFC   E+ +A ++   M   G + + VTY++
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C  + + E+ +L+ EM+ +G+ P  VTY +L +      ++  AL+L DEM    
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID------------ 168
              +  TY+  I+GL K      A  L   L   +       Y+ LI+            
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEG 612

Query: 169 ---GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
              G C  G +  A  +F+++ +    PN   YN+MIHG    G + KA++L++++E   
Sbjct: 613 LVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSS 672

Query: 226 VAPNCVTFNTLMLGCIR---NNETSKVVELLHR 255
            A + V    L+    R   N+E S++++ + R
Sbjct: 673 FACHTVAVIALVKALAREGMNDELSRLLQNILR 705


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 146/260 (56%), Gaps = 2/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           + EA  LL+ M  + + P+   ++TLID     G++ +A ++ +++ +  C+  +VVTYN
Sbjct: 254 LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKM-KAAKIVLAVMMKACIKPDVVTYN 312

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI+GY     V+ +  ++  M   G+ P V TY T+  GL +   V+ A+ LF+EM++ 
Sbjct: 313 SLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYK 372

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++  +  TY + IDGLCKN ++  A  L + ++    +  + +Y+ L+D LCK G+LE A
Sbjct: 373 NMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENA 432

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E FQ L   G   NV TYN+MI+G C      +A DL   ME KG  P+ +TF T++  
Sbjct: 433 KEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICA 492

Query: 240 CIRNNETSKVVELLHRMDER 259
               +E  K  ++L  M  R
Sbjct: 493 LFEKDENDKAEKILREMIAR 512



 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 145/252 (57%), Gaps = 2/252 (0%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D ++ +G + N   Y TLI+G C TGE      L   ++ +    +VV YNT+I+  CK 
Sbjct: 157 DQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKN 216

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K + ++ +LYSEM+ KGI P VVTYN L +G   +  ++ A  L +EM+  ++  +  T+
Sbjct: 217 KLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTF 276

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKC-ELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           NT ID L K G + +AA++   + +  C +  +  Y+ LIDG   + K++ A  +F S+ 
Sbjct: 277 NTLIDALGKEGKM-KAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMA 335

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           + G+ PNV TY  MI G C +  +D+A  LF +M+ K + P+ VT+ +L+ G  +N+   
Sbjct: 336 QSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLE 395

Query: 248 KVVELLHRMDER 259
           + + L  +M E+
Sbjct: 396 RAIALCKKMKEQ 407



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 128/226 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L +M +  ++P+   Y TL+DG+ L  E+  A+ +F SM   G   NV  Y  
Sbjct: 522 LKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTI 581

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK K V+E+++L+ EM  K + P +VTY +L   L + H +E A+ L  EM+   
Sbjct: 582 MIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHG 641

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y   +DGLCK+G +  A E+F+ L V    L ++ Y+ +I+ LCK G  + A 
Sbjct: 642 IQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEAL 701

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +L   +   G MP+ VT++I+I       + DKA  +  +M A+G+
Sbjct: 702 DLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 141/281 (50%), Gaps = 23/281 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  +L +M++  ++P+   Y++LIDG+    ++  A+ +F SM  +G   NV TY T
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTT 348

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK K V+E+++L+ EM  K + P +VTY +L  GL + H +E A+ L  +M+   
Sbjct: 349 MIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 408

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y   +D LCK G +  A E F+ L V    L ++ Y+ +I+GLCK      A 
Sbjct: 409 IQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAM 468

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--------------- 225
           +L   +   G MP+ +T+  +I       + DKA  +  +M A+G               
Sbjct: 469 DLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIV 528

Query: 226 --------VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
                   + P+ VT+ TLM G    NE      + + M +
Sbjct: 529 LAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQ 569



 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 135/280 (48%), Gaps = 23/280 (8%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING------------ 50
           EA  L   M  +G  P+A  + T+I       E D+A ++   M   G            
Sbjct: 466 EAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEA 525

Query: 51  ----------CMH-NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG 99
                     C+  +VVTY TL++GY    +++ +  ++  M   G+ P V  Y  +  G
Sbjct: 526 KIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDG 585

Query: 100 LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
           L +   V+ A+ LF+EM+H ++     TY + ID LCKN ++  A  L + ++    +  
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           + +Y+ L+DGLCK G+LE A E+FQ L   G   NV  Y  MI+  C  G  D+A DL  
Sbjct: 646 VYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQX 705

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            ME KG  P+ VTF+ ++      +E  K  ++L  M  R
Sbjct: 706 KMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIAR 745



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 2/245 (0%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
            D M+     P  F ++ ++              LF   + NG   ++ T N L+N +C 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              +  + ++ + +L +G  P  +T NTL  GL    +++ AL   D++          +
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y T I+GLCK G     A L R L     +  +  Y+ +I  LCK   L  A +L+  + 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM--LGCIRNNE 245
             G+ PNVVTYN +++GFC  G + +A  L  +M+ K + P+  TFNTL+  LG     +
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 246 TSKVV 250
            +K+V
Sbjct: 291 AAKIV 295



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 120/244 (49%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+    + L++ FC    I  A  +  ++   G   N +T NTLI G C   +++++
Sbjct: 93  GATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKA 152

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L  + +++++G +   V+Y TL +GL +  + +   +L  +++   V  +   YNT I  
Sbjct: 153 LYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHS 212

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCKN  + +A +L+  + V      +  Y+ L+ G C +G L+ A+ L   +    + P+
Sbjct: 213 LCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPD 272

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T+N +I     +G+M  A  +   M    + P+ VT+N+L+ G    N+      + +
Sbjct: 273 VCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFY 332

Query: 255 RMDE 258
            M +
Sbjct: 333 SMAQ 336



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 65/149 (43%)

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A+  FD M        T  +N  +  L  N +      LF+          +   + L++
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
             C +  +  A+ +  ++ + G  PN +T N +I G C  G++ KA      + A+G   
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           N V++ TL+ G  +  ET  V  LL +++
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLE 195


>gi|12324348|gb|AAG52140.1|AC022355_1 hypothetical protein; 19198-19943 [Arabidopsis thaliana]
          Length = 233

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 120/216 (55%), Gaps = 18/216 (8%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           EL +S D   C  NVVTYNTLI G+CK K V+E + L+ EM  +G+    VTY TL  GL
Sbjct: 3   ELMISKD---CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGL 59

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
           F+    + A ++F EM    V  +  TYN  +DGLCKNG + +A  +F  ++        
Sbjct: 60  FQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVVFGYMQ-------- 111

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
                    +CK GK+E  W+LF SL   G+ PNVVTY  MI GFC  G  ++A+ LF  
Sbjct: 112 -------KRMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 164

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           M+  G  P+  T+NTL+   +R+ + +   EL+  M
Sbjct: 165 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 200



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 15/228 (6%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + +LMI +   PN   Y+TLI GFC    +D   ELF  M   G + N VTY TLI G  
Sbjct: 1   MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 60

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  D + +  ++ EM+S G+ P ++TYN L  GL +  ++E AL +F  MQ         
Sbjct: 61  QAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVVFGYMQKR------- 113

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
                   +CK G + +  +LF +L +   +  +  Y+ +I G CK G  E A+ LF+ +
Sbjct: 114 --------MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 165

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
              G +P+  TYN +I     DG    + +L  +M +   A +  T+ 
Sbjct: 166 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 213



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 87/182 (47%), Gaps = 15/182 (8%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           ++  M+SK   P VVTYNTL  G  +  +V+  ++LF EM    +   T TY T I GL 
Sbjct: 1   MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 60

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G    A E+F+ +        I  Y+ L+DGLCK GKLE A               +V
Sbjct: 61  QAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKA---------------LV 105

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +  M    C  G+++   DLF  +  KGV PN VT+ T++ G  +     +   L  +M
Sbjct: 106 VFGYMQKRMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 165

Query: 257 DE 258
            E
Sbjct: 166 KE 167



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 20/190 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M QRG+  N   Y+TLI G    G+ D A+E+F  M  +G   +++TYN 
Sbjct: 30  VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNI 89

Query: 61  LINGYCKTKDVEESL--------------------NLYSEMLSKGIRPTVVTYNTLFHGL 100
           L++G CK   +E++L                    +L+  +  KG++P VVTY T+  G 
Sbjct: 90  LLDGLCKNGKLEKALVVFGYMQKRMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGF 149

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
            +    E A  LF +M+      ++ TYNT I    ++G    +AEL + +R  +     
Sbjct: 150 CKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 209

Query: 161 EAYSCLIDGL 170
             Y  + D L
Sbjct: 210 STYGLVTDML 219



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%)

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +F  +    C   +  Y+ LI G CK  +++   ELF+ + + GL+ N VTY  +I G  
Sbjct: 1   MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 60

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             G  D A ++F +M + GV P+ +T+N L+ G  +N +  K + +   M +R
Sbjct: 61  QAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVVFGYMQKR 113


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 132/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   +++ A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G++  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 130/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   +E++  L+ EML+ G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 132/245 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++ G   + + ++ L+  F   GEI  A+ +F ++   G   +VV++NTL+NGY K  D+
Sbjct: 128 LEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E   L + M + G++P V TY+ L +GL +  ++E A +LFDEM ++ +     T+ T 
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTL 247

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            P+ +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    +
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367

Query: 252 LLHRM 256
           +L  M
Sbjct: 368 MLREM 372



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +   G+RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +        E   RM + N
Sbjct: 319 DGSCKEGHLETAFEYRKRMIKEN 341



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 115/238 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + +V+S LI  +  +G +  A E +     +       T   +I    K K  +     Y
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFY 124

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  K 
Sbjct: 125 EESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + E   L   ++    +  +  YS LI+GLCK  K+E A ELF  +   GL+PN VT+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF 244

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L   M
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 137/257 (53%), Gaps = 2/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +   MI+    PNA  ++TLI GFC  G ++ A +LF  M+  GC   +VTYNT
Sbjct: 259 VEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNT 318

Query: 61  LINGYCKTKD-VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+  CK +  V  +++L++++   G+ PT+VTYN+L  G  +  ++  A++ FDEM+  
Sbjct: 319 LIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-G 377

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             A    TY+  IDGLCK   + EAA+    ++       +  Y  LI+G CK G+L++A
Sbjct: 378 KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSA 437

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              F+ +   G  PN V +N +I G C   + +    L   M A+G  P+ +T+N L+ G
Sbjct: 438 LLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISG 497

Query: 240 CIRNNETSKVVELLHRM 256
               N       L   M
Sbjct: 498 LCSANRVEDAQRLFDGM 514



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 137/255 (53%), Gaps = 8/255 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A      M   GV P+   Y  L+     +G +  A  LF +M    C  +++TYN 
Sbjct: 157 LEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNV 213

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYCK     E+ +L  E+L  G  P V TY+ + +   ++ +VE A ++F +M  S+
Sbjct: 214 LMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN 273

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI-GKLETA 179
                 T+NT I G CK G + +A +LF  +  + C+  I  Y+ LID LCK  G + TA
Sbjct: 274 CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LF  L   GL P +VTYN +I GFC+  ++ +A   F +ME K  APN +T++ L+ G
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDG 392

Query: 240 CI---RNNETSKVVE 251
                R  E +K +E
Sbjct: 393 LCKVRRMKEAAKTLE 407



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 36/293 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A RL   ++     PNA  Y+ LI GFC  G++ +A  +F  M  +G + N  T NTL
Sbjct: 14  DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 73

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G C+   +  +L L+ EM +    PT  ++N L  G F   +V  AL    +M+ S  
Sbjct: 74  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSS 133

Query: 122 AAETSTYNTFIDGLC----KNGYIVEAAELFRTLR------------------------- 152
           +  T TYN  + GLC        + +A E F+ ++                         
Sbjct: 134 SVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMA 193

Query: 153 -------VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                   + C   I  Y+ L+DG CKIG+   A  L + + + G  PNV TY+I+I+ +
Sbjct: 194 EAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCY 253

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C   ++++A ++F+ M      PN VTFNTL+ G  +       ++L   M++
Sbjct: 254 CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 306



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 109/204 (53%), Gaps = 4/204 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P    Y++LI GFC    +  A + F  M+   C  NV+TY+ LI+G CK + ++E+
Sbjct: 344 GLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEA 402

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
                +M + G  PTVVTY  L +G  +  +++ AL  F++M+ +  A  T  +NT IDG
Sbjct: 403 AKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDG 462

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK     +   L   +    C+  +  Y+CLI GLC   ++E A  LF  +      PN
Sbjct: 463 LCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPN 519

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLF 218
           V T+N +I G C   ++++A ++ 
Sbjct: 520 VTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA++ L+ M   G  P    Y  LI+GFC  GE+  A   F  M + GC  N V +NT
Sbjct: 399 MKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNT 458

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK +   + L L   M ++G +P V+TYN L  GL   ++VE A +LFD M    
Sbjct: 459 LIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA--- 515

Query: 121 VAAETSTYNTFIDGLCKNGYIVEA 144
            A   +T+N  I GLC    + EA
Sbjct: 516 CAPNVTTFNFLIRGLCAQKKVEEA 539



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 42/237 (17%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L++G    +  +++L L+ E+L+    P   TYN L  G  +  Q+  A+ +F +M+ 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRT---------------------------- 150
           S +    ST NT + GLC+ G +  A +LFR                             
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 151 -------LRVLKCELGIEAYSCLIDGLC----KIGKLETAWELFQSLPRVGLMPNVVTYN 199
                  +R     +    Y+ ++ GLC       +LE A E F+ +   G+ P++ +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           I++    + G+M +AH LF  M     +P+ +T+N LM G  +  +T +   L+  +
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 145/260 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD+M ++GV PN   Y+TLI G      +D A +LF +M+  G +    TY  
Sbjct: 385 IDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYIL 444

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+ Y K+   +++L  + +M  +GI P +V  N   + L E+ ++  A  +F+ ++ + 
Sbjct: 445 FIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNG 504

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A ++ TYN  +    K G + EA EL   +   +CE  I   + LI+ L K G+++ AW
Sbjct: 505 LAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAW 564

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  L  + L P VVTYN +I G   +GQ+ +A +LF  M   G  PN +TFNT++   
Sbjct: 565 KMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCL 624

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N+E    +++L++M   N
Sbjct: 625 CKNDEVDLALKMLYKMTTMN 644



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 125/236 (52%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D+A  L   ++     P    Y  L+DG   +G ++ A+ELF  M   GC  N   YN 
Sbjct: 876  LDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNI 935

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LING+ KT DV  +  L+  M+ +GIRP + +Y +L   L E  +V+ AL  F++++ + 
Sbjct: 936  LINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  ++  YN  IDGL ++  I EA  L+  ++       +  Y+ LI  L   G +E A 
Sbjct: 996  LYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAG 1055

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            +L++ L  +GL PNV TYN +I G+   G  D A+ ++  M   G +PN  TF  L
Sbjct: 1056 KLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 129/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R++  M   G  P+   Y+ LID  C  G++D A ELFV M  +    + VTY T
Sbjct: 280 IDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYIT 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++ +    D+      +SEM + G  P V+T+  L + L +   ++ A  L D M+   
Sbjct: 340 MLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQG 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYNT I GL +   + +A +LF  +  L        Y   ID   K G+ + A 
Sbjct: 400 VLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKAL 459

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E F+ +   G+ PN+V  N  ++     G++ +A  +F  +++ G+AP+ VT+N +M   
Sbjct: 460 ETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCY 519

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +  + +ELL  M E
Sbjct: 520 SKAGQVDEAIELLSDMSE 537



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 127/237 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M     +P+   Y T++D F   G++ R +E +  M+ +G   +V+T+  
Sbjct: 315 LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTI 374

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK  +++E+ +L   M  +G+ P + TYNTL  GL  +++++ AL LF+ M+   
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY  FID   K+G   +A E F  +++      I A +  +  L ++G+L  A 
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +F  L   GL P+ VTYN+M+  +   GQ+D+A +L  DM      P+ +  N+L+
Sbjct: 495 VIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLI 551



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 129/235 (54%)

Query: 4    ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
            A  L   M   G  P+ F Y+ L+D    +G+I+   EL+  M  + C  N +T+N +I 
Sbjct: 809  AWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIA 868

Query: 64   GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
               K+  ++++L+L+ +++S    PT  TY  L  GL +  ++E A +LF+EM       
Sbjct: 869  NLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRP 928

Query: 124  ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              + YN  I+G  K G +  A ELF+ +        +++Y+ L+  LC+ G+++ A   F
Sbjct: 929  NNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYF 988

Query: 184  QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            + L + GL  + + YN+MI G     ++++A  L+ +M+++G+ P+  T+N+L+L
Sbjct: 989  EKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLIL 1043



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 125/245 (51%)

Query: 15   GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
            GV+P    Y+ LI+GF      + A  LF  M   GC  +V TYN L++ + K+  + E 
Sbjct: 785  GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINEL 844

Query: 75   LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
              LY +M+    +P  +T+N +   L + + ++ AL LF ++   D +    TY   +DG
Sbjct: 845  FELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDG 904

Query: 135  LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            L K+G + EA ELF  +    C      Y+ LI+G  K G + TA ELF+ + R G+ P+
Sbjct: 905  LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964

Query: 195  VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            + +Y  ++   C  G++D A   F  ++  G+  + + +N ++ G  R++   + + L  
Sbjct: 965  LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYD 1024

Query: 255  RMDER 259
             M  R
Sbjct: 1025 EMQSR 1029



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 130/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + M   GV P A+ Y   ID +  +G  D+A E F  M I G   N+V  N 
Sbjct: 420 LDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNA 479

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +    +   + E+  +++ + S G+ P  VTYN +     +  QV+ A++L  +M  + 
Sbjct: 480 SLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ 539

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +    N+ I+ L K G + EA ++F  L+ +K    +  Y+ LI GL K G+++ A 
Sbjct: 540 CEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAM 599

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF S+   G  PN +T+N ++   C + ++D A  +   M      P+ +TFNT++ G 
Sbjct: 600 ELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGL 659

Query: 241 IRNNETSKVVELLHRMDE 258
           +     S  + L H+M +
Sbjct: 660 VIEKRVSDAIWLFHQMKK 677



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 135/259 (52%), Gaps = 5/259 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A    + M  RG+ PN    +  +      G +  A+ +F  +  NG   + VTYN +
Sbjct: 456 DKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMM 515

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +  Y K   V+E++ L S+M      P ++  N+L + L++  +V+ A K+F  ++   +
Sbjct: 516 MKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKL 575

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    TYNT I GL K G +  A ELF ++    C      ++ ++D LCK  +++ A +
Sbjct: 576 APTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALK 635

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +  +  MP+V+T+N +IHG   + ++  A  LF  M+ K + P+CVT  TL+ G +
Sbjct: 636 MLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVV 694

Query: 242 RNN---ETSKVVE-LLHRM 256
           +N    +  K+ E  +HR+
Sbjct: 695 KNGLMEDAFKIAEDFVHRL 713



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 117/229 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+ M   G++PN + Y+  I      G ID A  +   M+ +GC  +VVTY  LI+  C
Sbjct: 251 LLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALC 310

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               +++++ L+ +M +   +P  VTY T+     +   +    + + EM+    A +  
Sbjct: 311 TAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVI 370

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+   ++ LCK G I EA  L   +R       +  Y+ LI GL ++ +L+ A +LF ++
Sbjct: 371 TFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNM 430

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
             +G++P   TY + I  +   G+ DKA + F  M+ +G+APN V  N 
Sbjct: 431 ETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNA 479



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 123/256 (48%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            ++E   L + MI    +PN   ++ +I     +  +D+A +LF  +          TY  
Sbjct: 841  INELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGP 900

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L++G  K+  +EE+  L+ EM+  G RP    YN L +G  +   V  A +LF  M    
Sbjct: 901  LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  +  +Y + +  LC+ G + +A   F  L+     L   AY+ +IDGL +  ++E A 
Sbjct: 961  IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEAL 1020

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             L+  +   G+ P++ TYN +I      G +++A  L+ +++  G+ PN  T+N L+ G 
Sbjct: 1021 TLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGY 1080

Query: 241  IRNNETSKVVELLHRM 256
              +  +     +  RM
Sbjct: 1081 SMSGNSDSAYAVYKRM 1096



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 117/247 (47%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G   NA+ Y+ LI     +G    A E++  M + G   ++ T++ L+    K +D
Sbjct: 185 MREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRD 244

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            E   +L  EM S G++P + TY      L    +++ A ++   M+      +  TY  
Sbjct: 245 TETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTV 304

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID LC  G + +A ELF  ++    +     Y  ++D     G L    E +  +   G
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+V+T+ I+++  C  G +D+A  L   M  +GV PN  T+NTL+ G +R N     +
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424

Query: 251 ELLHRMD 257
           +L + M+
Sbjct: 425 DLFNNME 431



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 44/296 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++   +    + P    Y+TLI G    G++ RA ELF SM  NGC  N +T+NT
Sbjct: 560 VDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNT 619

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK  +V+ +L +  +M +    P V+T+NT+ HGL    +V  A+ LF +M+   
Sbjct: 620 ILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM- 678

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI-------------------- 160
           +  +  T  T + G+ KNG + +A   F+        LG+                    
Sbjct: 679 LTPDCVTLCTLLPGVVKNGLMEDA---FKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGT 735

Query: 161 -------EAYSC------------LIDGLCKIGKLETAWELFQSLPR-VGLMPNVVTYNI 200
                  +   C            +I  LCK  +   A  +F    + +G+ P + +YN 
Sbjct: 736 EKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNF 795

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +I GF      + A +LF +M+  G AP+  T+N L+    ++ + +++ EL  +M
Sbjct: 796 LIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQM 851



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 38/291 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  L   M   G  PN   ++T++D  C   E+D A ++   M    CM +V+T+NT
Sbjct: 595 VQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNT 654

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH-- 118
           +I+G    K V +++ L+ +M  K + P  VT  TL  G+ +   +E A K+ ++  H  
Sbjct: 655 IIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRL 713

Query: 119 -------------SDVAAETSTYNTFIDG-------LCKNGYI---------------VE 143
                          +  +  T  T + G       +CK+G +               V 
Sbjct: 714 GVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVA 773

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
            +   R  + L  +  +E+Y+ LI+G   +   E AW LF  +   G  P+V TYN+++ 
Sbjct: 774 QSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLD 833

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
                G++++  +L+  M      PN +T N ++   +++N   K ++L +
Sbjct: 834 AHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFY 884



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 118/257 (45%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M+  G++P+   +S L+       + +  + L   M+  G   N+ TY   I
Sbjct: 212 EALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICI 271

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               +   ++E+  +   M   G  P VVTY  L   L    +++ A++LF +M+ S   
Sbjct: 272 RVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHK 331

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T +D     G +    E +  +        +  ++ L++ LCK G ++ A+ L
Sbjct: 332 PDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHL 391

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + G++PN+ TYN +I G     ++D A DLF +ME  GV P   T+   +    +
Sbjct: 392 LDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGK 451

Query: 243 NNETSKVVELLHRMDER 259
           +  + K +E   +M  R
Sbjct: 452 SGRSDKALETFEKMKIR 468



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 1/182 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M +    P+  V ++LI+     G +D A ++F  +        VVTYNT
Sbjct: 525 VDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNT 584

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  K   V+ ++ L++ M   G  P  +T+NT+   L +  +V+ ALK+  +M   +
Sbjct: 585 LIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN 644

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+NT I GL     + +A  LF  ++ +     +     L+ G+ K G +E A+
Sbjct: 645 CMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCV-TLCTLLPGVVKNGLMEDAF 703

Query: 181 EL 182
           ++
Sbjct: 704 KI 705



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 1/160 (0%)

Query: 100 LFEIHQ-VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           +  IH+ V   + +F+ MQ+  +  + +TY     GL   G + +    F  +R     L
Sbjct: 133 ILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHL 192

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
              +Y+ LI  L + G    A E+++ +   GL P++ T++ ++         +    L 
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +ME+ G+ PN  T+   +    R     +   ++ RM++
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMED 292



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +++A +L + +   G+ PN F Y+ LI G+ ++G  D A  ++  M + GC  N  T+  
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQ 1110

Query: 61   LIN 63
            L N
Sbjct: 1111 LPN 1113


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA + L+ M   G +PN   ++ ++   C TG    A +L   M   GC  +VVT+N 
Sbjct: 67  LDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNI 126

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  C+   +  ++++  +M + G  P  ++YN L HG  +  +++ A++  + M    
Sbjct: 127 LINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYNT +  LCK+G +  A EL   L    C   +  Y+ +IDGL K+GK + A 
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL P+V+TY+ +I G   +G++++A   F D+E  GV PN  T+N++M G 
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGL 306

Query: 241 IRNNETSKVVELLHRM 256
            +  +T + ++ L  M
Sbjct: 307 CKAQQTDRAIDFLAYM 322



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 139/258 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  M+++G  P+   ++ LI+  C  G + RA ++   M  +GC  N ++YN L+
Sbjct: 104 DAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLL 163

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K ++ ++     M+S+G  P +VTYNT+   L +  +V+ A++L +++     +
Sbjct: 164 HGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCS 223

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G   +A EL   +R    +  +  YS LI GL + GK+E A + 
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKF 283

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G+ PN  TYN ++ G C   Q D+A D    M +KG  P  V++  L+ G   
Sbjct: 284 FHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIAN 343

Query: 243 NNETSKVVELLHRMDERN 260
                + +ELL+ +  R 
Sbjct: 344 EGLAKEALELLNELCSRG 361



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 132/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +LD  +++   P+   Y+ LI+  C    + +A +L   M   GC  +VVTYN L+NG C
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   ++E++   + M S G +P V+T+N +   +    +   A KL  EM     +    
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N  I+ LC+ G +  A ++   +    C     +Y+ L+ G CK  K++ A +  + +
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  P++VTYN M+   C DG++D A +L   + +KG +P  +T+NT++ G  +  +T
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 247 SKVVELLHRM 256
            + VELLH M
Sbjct: 243 DQAVELLHEM 252



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 122/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M   G  PN+  Y+ L+ GFC   ++DRA +    M   GC  ++VTYNT
Sbjct: 137 LGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNT 196

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK   V+ ++ L +++ SKG  P ++TYNT+  GL ++ + + A++L  EM+   
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG 256

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I GL + G + EA + F  +     +     Y+ ++ GLCK  + + A 
Sbjct: 257 LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAI 316

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +    +   G  P  V+Y I+I G  N+G   +A +L  ++ ++GV
Sbjct: 317 DFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 113/210 (53%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  +V+TY  LI   C    V +++ L  EM S+G +P VVTYN L +G+ +  +++ A+
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           K  + M          T+N  +  +C  G  ++A +L   +    C   +  ++ LI+ L
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C+ G L  A ++ + +P  G  PN ++YN ++HGFC + +MD+A      M ++G  P+ 
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           VT+NT++    ++ +    VELL+++  + 
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKG 221



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 106/203 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A + L++M+ RG  P+   Y+T++   C  G++D A EL   +   GC   ++TYNT
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K    ++++ L  EM  KG++P V+TY++L  GL    +VE A+K F +++   
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN+ + GLCK      A +    +    C+    +Y+ LI+G+   G  + A 
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351

Query: 181 ELFQSLPRVGLMPNVVTYNIMIH 203
           EL   L   G++       +++ 
Sbjct: 352 ELLNELCSRGVVKKSSAEQVVVR 374


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 131/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 143/254 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M+++GV P+   +S+LI  F     +D+A   F  M   G + + V Y  L+
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLM 300

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+  ++ E+L +  EML +G    V+ YNT+ +GL +   +  A KLFDEM      
Sbjct: 301 HGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGAL 360

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+ T I G C++G + +A  LF T+     +  I AY+ LIDG CK+G++E A EL
Sbjct: 361 PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 420

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +    + PN +TY I+I+ +C+ G + +A  L+  M  KG+ P  VT NT++ G  R
Sbjct: 421 WDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 480

Query: 243 NNETSKVVELLHRM 256
           + ++SK  E L RM
Sbjct: 481 SGDSSKADEFLGRM 494



 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +++ M  +G++P+ F Y+ +I+G C  G   RA+ + + M   G   +  TYNT
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  +  E+  ++ EML +G+ P +V++++L         ++ AL  F +M+   
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   + G C+NG ++EA ++   +    C L + AY+ +++GLCK   L  A 
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G +P+  T+  +IHG C DG M KA  LF  M  + + P+ V +NTL+ G 
Sbjct: 349 KLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGF 408

Query: 241 IRNNETSKVVELLHRMDER 259
            +  E  K  EL   M  R
Sbjct: 409 CKVGEMEKASELWDGMISR 427



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A +L D M++RG  P+ + ++TLI G C  G + +A  LF +M       ++V YNT
Sbjct: 344 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  ++E++  L+  M+S+ I P  +TY  L +    +  V  A +L+D M    
Sbjct: 404 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T NT I G C++G   +A E    +          +Y+ LI+G  +   ++ A+
Sbjct: 464 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAF 523

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                + + GL+P+++TYN++++GFC  G+M +A  +   M  KG+ P+  T+  L+ G 
Sbjct: 524 LWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGH 583

Query: 241 IRNNETSKVVELLHRMDER 259
           +  +  ++       M +R
Sbjct: 584 VTQDNLNEAFRFHDEMLQR 602



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA ++ D M+++G   +   Y+T+++G C    +  A +LF  M   G + +  T+ T
Sbjct: 309 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 368

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+  ++ ++L+L+  M  + I+P +V YNTL  G  ++ ++E A +L+D M    
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I+  C  G++ EA  L+  +     +  +   + +I G C+ G    A 
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKAD 488

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G+ P+ ++YN +I+GF  +  MDKA      ME +G+ P+ +T+N +M G 
Sbjct: 489 EFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGF 548

Query: 241 IRNNETSKVVELLHRMDER 259
            R     +   +L +M E+
Sbjct: 549 CRQGRMQEAELVLRKMIEK 567



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 131/249 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+  N +  + +++  C  G+ D  +     M+ NG   ++VTYNTLI  YC+   
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +EE+  + + M  KG++P++ TYN + +GL +  +   A  +  EM +  ++ +T+TYNT
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +   C+     EA E+F  +        + ++S LI    +   L+ A   F+ + + G
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L+P+ V Y +++HG+C +G M +A  +  +M  +G   + + +NT++ G  +    +   
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348

Query: 251 ELLHRMDER 259
           +L   M ER
Sbjct: 349 KLFDEMVER 357



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 116/231 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  L   M QR ++P+   Y+TLIDGFC  GE+++A EL+  M       N +TY  
Sbjct: 379 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC    V E+  L+  M+ KGI+PT+VT NT+  G         A +    M    
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +  +YNT I+G  +   + +A      +        I  Y+ +++G C+ G+++ A 
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAE 558

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
            + + +   G+ P+  TY  +I+G      +++A     +M  +G AP+ V
Sbjct: 559 LVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 105/216 (48%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           E  VS     C  N + ++ LI  Y + + + E    +  + SKG   ++   N+L  GL
Sbjct: 34  EALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGL 93

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
            +I  VE A ++  E+  S +     T N  ++ LCK+G   +       +        +
Sbjct: 94  VKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADM 153

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             Y+ LI   C+ G LE A+E+  S+   GL P++ TYN +I+G C  G+  +A  + ++
Sbjct: 154 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 213

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           M   G++P+  T+NTL++   R +  S+  E+   M
Sbjct: 214 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 249



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 114/240 (47%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  V+  LI  +    ++    E F  +   G + ++   N+L+ G  K   VE +  ++
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E++  GI   V T N + + L +  + +       EM+ + + A+  TYNT I   C+ 
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA E+  ++     +  +  Y+ +I+GLCK G+   A  +   +  +GL P+  TY
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N ++   C      +A ++F +M  +GV P+ V+F++L+    RN    + +     M +
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 119/259 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E +    ++  +G   +    ++L+ G      ++ A E+   +  +G   NV T N 
Sbjct: 64  LREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNI 123

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  CK    ++  +  SEM   GI   +VTYNTL         +E A ++ + M    
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I+GLCK G    A  +   +  +        Y+ L+   C+      A 
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK 243

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  + R G++P++V+++ +I  F  +  +D+A   F DM+  G+ P+ V +  LM G 
Sbjct: 244 EIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY 303

Query: 241 IRNNETSKVVELLHRMDER 259
            RN    + +++   M E+
Sbjct: 304 CRNGNMLEALKIRDEMLEQ 322


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 130/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M  R   P+ + Y TL+DG C    ID A  L   M I+GC  + VT+N 
Sbjct: 215 VDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  D+  +  L   M  KG  P  VTYNTL HGL    ++E A+ L D M  S 
Sbjct: 275 LINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GL K G  ++ A +   +      +    YS LI GL K GK + A 
Sbjct: 335 CVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAM 394

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G   N + Y+ +I G C DG+ D A ++  +M  KG  PN  T ++LM G 
Sbjct: 395 HLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGF 454

Query: 241 IRNNETSKVVELLHRMDERN 260
                + + VE+   M + N
Sbjct: 455 FEAGNSHRAVEVWKDMAKHN 474



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 124/239 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A++L+D M  +G  PN   Y+TLI G CL G++++A  L   M  + C+ NVVTY T
Sbjct: 285 LSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGT 344

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING  K     +   + + M  +G       Y+TL  GLF+  + + A+ LF EM    
Sbjct: 345 IINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKG 404

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T  Y+  IDGLC++G   +A E+   +    C       S L+ G  + G    A 
Sbjct: 405 YELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAV 464

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+++ + +     N V Y+++IHG C DG++ +A  ++  M  KG  P+ V +++++ G
Sbjct: 465 EVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMING 523



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 120/228 (52%), Gaps = 2/228 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L LM +RG   N +VYSTLI G    G+   A  LF  M + G   N + Y+ +I+G C
Sbjct: 361 VLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLC 420

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +    ++++ + SEM +KG  P   T ++L  G FE      A++++ +M   +      
Sbjct: 421 RDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEV 480

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y+  I GLCK+G + EA  ++  +    C+  + AYS +I+GL   G +E A +L+  +
Sbjct: 481 CYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEM 540

Query: 187 PRVGL--MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
              G    P+VVTYNI+++  C    + +A DL   M  +G  P+ VT
Sbjct: 541 LCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVT 588



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 4/227 (1%)

Query: 37  DRARELFVSMDIN-GCMHNVVTYNTLINGYCKTKDVEESLNLYSEML-SKG--IRPTVVT 92
           ++A +LF  M     C     ++N+++N   +      +L  Y+ ++ +KG  I P V+T
Sbjct: 142 EKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLT 201

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           +N +   + ++  V+ A+++F +M       +  TY T +DGLCK   I EA  L   ++
Sbjct: 202 FNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQ 261

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           +  C      ++ LI+GLCK G L  A +L  ++   G +PN VTYN +IHG C  G+++
Sbjct: 262 IDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLE 321

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           KA  L   M +    PN VT+ T++ G ++         +L  M+ER
Sbjct: 322 KAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEER 368



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 2/158 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  +L  M  +G  PNA+  S+L+ GF   G   RA E++  M  +    N V Y+ L
Sbjct: 426 DDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVL 485

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--QHS 119
           I+G CK   V+E++ ++++ML KG +P VV Y+++ +GL     VE A++L++EM  Q  
Sbjct: 486 IHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGP 545

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           D   +  TYN  ++ LCK   I  A +L  ++    C+
Sbjct: 546 DSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCD 583


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 131/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 139/241 (57%), Gaps = 4/241 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL   M   GV+P+ + YS LI+G C   ++D   ELF  M   G + N VT+ T
Sbjct: 191 LNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTT 250

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P +VTYNTL +GL +   ++ A  L DEM    
Sbjct: 251 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKG 310

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLET 178
           +  +  TY T IDG CK G +  A E +R  R++K  + ++  AY+ LI GLC+ G+   
Sbjct: 311 LKPDKITYTTLIDGSCKEGDLETAFE-YRX-RMIKENIRLDDVAYTALISGLCQEGRSVD 368

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT+N LM 
Sbjct: 369 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMN 428

Query: 239 G 239
           G
Sbjct: 429 G 429



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 126/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GEI  A+ +F ++   G   +VV++NTL+NGY K  D+ E 
Sbjct: 135 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEX 194

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L   M + G++P V TY+ L +GL +  +++   +LFDEM    +     T+ T IDG
Sbjct: 195 FRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDG 254

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 255 HCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 314

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 315 KITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 374

Query: 255 RM 256
            M
Sbjct: 375 EM 376



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL +G  ++  +    +L   MQ
Sbjct: 143 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQ 202

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +  ELF  +           ++ LIDG CK G+++
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVD 262

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P++VTYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 263 LAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 322

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 323 DGSCKEGDLETAFEYRXRMIKEN 345



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S +I  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 67  RSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 126

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 127 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 186

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L + ++    +  +  YS LI+GLCK  K++   ELF  +   GL+PN V
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGV 246

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ VT+NTL+ G  +  +  +  +L+  M
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEM 306


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 141/252 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A ++ + M   GV PNA V++TLID  C  G ++   +L+  M + G M ++V YN 
Sbjct: 271 MENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNA 330

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG C+ ++++ + ++  EM + G++P  VTY TL  G  +  +++ A+ +  +M   +
Sbjct: 331 LVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKE 390

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+ +  TY   I GL K G  V+A  + R +     E     Y+ +ID  C+ G ++T +
Sbjct: 391 VSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGF 450

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   G  P VVTYN++++G C  GQM  A  L   M   GV+P+ +T+N L+ G 
Sbjct: 451 KLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQ 510

Query: 241 IRNNETSKVVEL 252
            ++ + +   EL
Sbjct: 511 CKHGKVANSEEL 522



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    L   M   GV+P+ + Y  LI GFC TG ++ A ++F  M   G   N V + T
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTT 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK  +V   ++LY +M  +G+ P +V YN L +GL     ++ A  + +EM+++ 
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK+G +  A ++ + +   +  L    Y+ LI GL K G+   A 
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +    L P+  TY ++I  FC  G +     L  +M+ KG  P  VT+N +M G 
Sbjct: 416 RVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LLH M
Sbjct: 476 CKLGQMKNADMLLHAM 491



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 131/248 (52%), Gaps = 1/248 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G+ P   +++ L+  F   GE+  AR++F  M        VVT+NTLI+G C+ +D
Sbjct: 177 LLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARD 235

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++    LY EM   G++P V TY  L  G     ++E+A+K+F+EM+ + V      + T
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTT 295

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK G +    +L++ +RV      + AY+ L++GLC+   L+ A  + + +   G
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ VTY  +I G C DG++D A D+   M  K V+ + VT+  L+ G  +        
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415

Query: 251 ELLHRMDE 258
            +L  M E
Sbjct: 416 RVLREMME 423



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 128/259 (49%), Gaps = 4/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+ L ++RG+   A V S L+     T E   A   ++ +   G       +N 
Sbjct: 135 LPDACSLVLLALRRGISLPAPVCSGLMSRLPSTPE---AYTFYLQLLDAGMAPETRLFNV 191

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  + +  ++  +  ++ EM  + ++PTVVT+NTL  G+     ++    L+ EM    
Sbjct: 192 LMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVG 250

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   I G C+ G +  A ++F  +R          ++ LID  CK G +    
Sbjct: 251 VKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGM 310

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+Q +   G+MP++V YN +++G C    +  A  +  +M+  G+ P+ VT+ TL+ GC
Sbjct: 311 DLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGC 370

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ +    +++  +M E+
Sbjct: 371 CKDGKLDMAMDIKQKMAEK 389



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 3/216 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +++ M   G++P+   Y+TLIDG C  G++D A ++   M       + VTY  
Sbjct: 341 LKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTA 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K     ++  +  EM+   + P   TY  +         V+   KL  EMQ+  
Sbjct: 401 LISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKG 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  ++GLCK G +  A  L   +  +        Y+ L+DG CK GK+  + 
Sbjct: 461 KKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSE 520

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           EL  S    G++P+   Y  +I            HD
Sbjct: 521 ELESS---KGMVPDFAVYTSLISELAKKKPAKNYHD 553


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 132/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L     Q GV  + F YS L+D F   G   +A E+F +M   GCM + V YN 
Sbjct: 316 LEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNV 375

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K   V+E+L L  +M  KGI P   TYN +   L    + E A   F  M+   
Sbjct: 376 LISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRK 435

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYNT ++GL K     EA +LF  ++  KC   +  +  LID L K G++E A 
Sbjct: 436 HSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL 495

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    L ++G  PN   YN +I GFC  GQ+DK ++LF DM      P+ +T+  L+LG 
Sbjct: 496 EQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGF 555

Query: 241 IRNNETSKVVELLHRM 256
            R   TS  +ELL  M
Sbjct: 556 SRRGHTSMAMELLQEM 571



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 121/236 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL+ M ++G+ P+   Y+ +ID     G  ++A   F  M       +VVTYNT
Sbjct: 386 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 445

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K +  +E+ +L+ EM +    P + T+ TL   L +  ++E AL+    +    
Sbjct: 446 LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 505

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A  +  YN  I G C++G + +  ELF+ +    C      Y+ L+ G  + G    A 
Sbjct: 506 HAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAM 565

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           EL Q + R G  P + TYN++I      GQ++ A+ LF +M AKG  P+  T++ L
Sbjct: 566 ELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 2/242 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLN 76
           P+   Y+TLI G+C  G+ DRA ++F  +   G C  N V+++TL+   CK     ++L 
Sbjct: 123 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 182

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           ++ EML  G++  V   NTL H    +  +  A +L   M     A +  TY   ++  C
Sbjct: 183 VFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHC 242

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E A      R   C L    Y+ +I G  + G+L  A +LF+S      +P+V 
Sbjct: 243 RAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVF 302

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TYN++I   C   Q+++A  LF + E  GV  +  T++ LM    +    +K +E+ + M
Sbjct: 303 TYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM 361

Query: 257 DE 258
            +
Sbjct: 362 QK 363



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 3/244 (1%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-NGCMHNVVTYNTLINGYCKTKDV 71
           Q+GV  +    +  I  F   G++D A  +   M   N C  + V +   ++  C+ + V
Sbjct: 46  QKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRV 105

Query: 72  EESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYN 129
           E+++ L+ +M       P VV YNTL  G  +    + AL +F  + Q         +++
Sbjct: 106 EQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFD 165

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T +  LCK     +A  +F+ +     +  +   + LI   C++G L  A  L   +   
Sbjct: 166 TLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAH 225

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
               +  TY I+++  C  GQM +           G A + V +N ++ G IR    ++ 
Sbjct: 226 ACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEA 285

Query: 250 VELL 253
            +L 
Sbjct: 286 TQLF 289



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 38/235 (16%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGI------------------------------ 86
           T   ++   CK    E    L +E+  KG+                              
Sbjct: 20  TATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDM 79

Query: 87  ------RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETSTYNTFIDGLCKNG 139
                 +P  V +    H L E+ +VE A+ LFD+M+ + D A +   YNT I G CK G
Sbjct: 80  RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAG 139

Query: 140 YIVEAAELFRTLRVL-KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
               A ++FR L+    C+    ++  L+  LCK+ +   A  +FQ +   GL  +V   
Sbjct: 140 DGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVC 199

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           N +IH  C  G + +A  L   M A   A +  T+  L+    R  +  +V   +
Sbjct: 200 NTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFM 254


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 138/253 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D MI  G+RP+ ++Y+ +I   C   ++ RA+E+ V M+  GC  N+V YN LI+
Sbjct: 211 AMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLID 270

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK + V E++ +  ++  K ++P VVTY TL  GL ++ + E  L++ DEM     + 
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSP 330

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             +  ++ ++GL K G + EA  L + +        I  Y+ LID LCK    + A  LF
Sbjct: 331 SEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLF 390

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + ++GL PN VTY+I+I  FC  G++D A     +M   G+ P+   +N+L+ G  + 
Sbjct: 391 DRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKF 450

Query: 244 NETSKVVELLHRM 256
            + S    L+  M
Sbjct: 451 GDISAAESLMAEM 463



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 134/258 (51%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L+  + + GV PN FVY+ LID  C     D A  LF  M   G   N VTY+ 
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSI 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C+   ++ +L+   EM+  G++P+V  YN+L +G  +   +  A  L  EM +  
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + + G C  G I +A  L+  +        I  ++ L+ GL + G +  A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
           +LF  +    + PN VTYN+MI G+C +G M KA +   +M  KG+ P+  ++  L+ G 
Sbjct: 528 KLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587

Query: 240 CI--RNNETSKVVELLHR 255
           C+  + +E    V+ LH+
Sbjct: 588 CLTGQASEAKVFVDGLHK 605



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 37/296 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A   L+ MI++G+ P+ + Y  LI G CLTG+   A+     +    C  N + Y  
Sbjct: 558 MSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617

Query: 61  LINGYCKTKDVEESLN-----------------------------------LYSEMLSKG 85
           L++G+C+   +EE+L+                                   L  EM  +G
Sbjct: 618 LLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRG 677

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           ++P  V Y ++     +    + A  ++D M +        TY   I+GLCK G++ EA 
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCK-IGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            L   +R          Y C +D L K +G ++ A EL  ++ + GL+ N  TYN++I G
Sbjct: 738 ILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRG 796

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           FC  G+M++A +L   M   GV+P+C+T+ T++    R N+  K +EL + M E+ 
Sbjct: 797 FCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKG 852



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 35/272 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A   L  MI  G++P+ + Y++LI+G C  G+I  A  L   M        VVTY +
Sbjct: 418 LDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTS 477

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GYC    + ++L LY EM  KGI P++ T+ TL  GLF    +  A+KLF EM   +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTL-------------R 152
           V     TYN  I+G C+ G + +A E                +R L             +
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 153 VL-------KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           V         CEL    Y+ L+ G C+ GKLE A  + Q +   G+  ++V Y ++I G 
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGS 657

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                      L  +M  +G+ P+ V + +++
Sbjct: 658 LKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMI 689



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 5/260 (1%)

Query: 1   MDEASRLLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           + + SR  ++++Q    G   N   Y+ LIDG C   ++  A  +   +       +VVT
Sbjct: 240 LKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVT 299

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y TL+ G CK ++ E  L +  EML     P+    ++L  GL +  +VE AL L   + 
Sbjct: 300 YCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVA 359

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKL 176
              V+     YN  ID LCK     EA  LF R  ++  C   +  YS LID  C+ GKL
Sbjct: 360 EFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDV-TYSILIDMFCRRGKL 418

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +TA      +  +GL P+V  YN +I+G C  G +  A  L  +M  K + P  VT+ +L
Sbjct: 419 DTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSL 478

Query: 237 MLGCIRNNETSKVVELLHRM 256
           M G     + +K + L H M
Sbjct: 479 MGGYCSKGKINKALRLYHEM 498



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 6/243 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M  RG++P+  +Y+++ID    TG+   A  ++  M   GC+ N VTY  +ING C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE-IHQVEHALKLFDEMQHSDVAAET 125
           K   V E+  L S+M      P  VTY      L + +  ++ A++L + +    + A T
Sbjct: 729 KAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKG-LLANT 787

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
           +TYN  I G C+ G + EA+EL   +           Y+ +I  LC+   ++ A EL+ S
Sbjct: 788 ATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNS 847

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G+ P+ V YN +IHG C  G+M KA +L  +M  +G+ PN  T  T     I N+ 
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSET----TISNDS 903

Query: 246 TSK 248
           +SK
Sbjct: 904 SSK 906



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 120/254 (47%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           ++D M++    P+    S+L++G    G+++ A  L   +   G   N+  YN LI+  C
Sbjct: 319 MIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLC 378

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K ++ +E+  L+  M   G+ P  VTY+ L        +++ AL    EM    +     
Sbjct: 379 KGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVY 438

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YN+ I+G CK G I  A  L   +   K E  +  Y+ L+ G C  GK+  A  L+  +
Sbjct: 439 PYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G++P++ T+  ++ G    G +  A  LF +M    V PN VT+N ++ G       
Sbjct: 499 TGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNM 558

Query: 247 SKVVELLHRMDERN 260
           SK  E L+ M E+ 
Sbjct: 559 SKAFEFLNEMIEKG 572



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 110/239 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A RL   M  +G+ P+ + ++TL+ G    G I  A +LF  M       N VTYN 
Sbjct: 488 INKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNV 547

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYC+  ++ ++    +EM+ KGI P   +Y  L HGL    Q   A    D +   +
Sbjct: 548 MIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y   + G C+ G + EA  + + + +   +L +  Y  LIDG  K    +   
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFL 667

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +   GL P+ V Y  MI      G   +A  ++  M  +G  PN VT+  ++ G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 109/247 (44%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           +M +  + P     S L+ G         A ELF  M   G   +V  Y  +I   C+ K
Sbjct: 182 MMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELK 241

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           D+  +  +  +M + G    +V YN L  GL +  +V  A+ +  ++   ++  +  TY 
Sbjct: 242 DLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYC 301

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T + GLCK        E+   +  L+      A S L++GL K GK+E A  L + +   
Sbjct: 302 TLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEF 361

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ PN+  YN +I   C     D+A  LF  M   G+ PN VT++ L+    R  +    
Sbjct: 362 GVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTA 421

Query: 250 VELLHRM 256
           +  L  M
Sbjct: 422 LSFLGEM 428



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 1/202 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           ++ LI  Y +++ V + + ++  M++K  + P V T + L HGL +      A++LFD+M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
            +  +  +   Y   I  LC+   +  A E+   +    C++ I  Y+ LIDGLCK  K+
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  + + L    L P+VVTY  ++ G C   + +   ++  +M     +P+    ++L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           + G  +  +  + + L+ R+ E
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAE 360



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 35/180 (19%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--------------- 47
           EA  + DLMI  G  PN   Y+ +I+G C  G ++ A  L   M                
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFL 759

Query: 48  --------------------INGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                               + G + N  TYN LI G+C+   +EE+  L + M+  G+ 
Sbjct: 760 DILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVS 819

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P  +TY T+   L   + V+ A++L++ M    +  +   YNT I G C  G + +A EL
Sbjct: 820 PDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 55/95 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EAS L+  MI  GV P+   Y+T+I   C   ++ +A EL+ SM   G   + V YNT
Sbjct: 803 MEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           LI+G C   ++ ++  L +EML +G++P   T  T
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLKPNTETSET 897



 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + M ++G+RP+   Y+TLI G C+ GE+ +A EL   M   G   N  T  T
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSET 897

Query: 61  LINGYCKTK 69
            I+    +K
Sbjct: 898 TISNDSSSK 906


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V  ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 130/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++   G   +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +V A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 127/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V  A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +   G+RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G++ 
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVV 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +    +E   RM + N
Sbjct: 319 DGSCKEGDLETALEYRKRMIKEN 341



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 115/238 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + +V+S LI  +  +G +  A E +     +       T   ++    K K  +     Y
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN VT+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +I G C +G++  A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 245 TTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +   M + G++P    Y+TL+D +C  G++ +  +L   M   GC  N VTYN 
Sbjct: 521 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 580

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K  + E++  L  EML  G++ +  TYN L +G F    +  AL L +EM    
Sbjct: 581 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKG 640

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +   +TYN+FI GLCK G + +A +    +        + +Y+ LI G C++G L  A+
Sbjct: 641 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 700

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L  + L P +VTYN ++ G C  G+++ A  L ++M  +G+AP+ VT+  L+ G 
Sbjct: 701 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 760

Query: 241 IRNNETSKVVELLHRM 256
            +    S   E    M
Sbjct: 761 CKMGSLSMAQEFFDEM 776



 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 139/250 (55%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M +RG  PN   Y+ LI+G    GE ++A+ L   M   G   +  TYN LI GY 
Sbjct: 562 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 621

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               + E+L+L  EM+ KG  PTV TYN+  +GL ++ ++  A++   +M  +++  +  
Sbjct: 622 NKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 681

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I G C+ G +++A  LF  LR +     I  Y+ L+DGLC+ G+LE A +L   +
Sbjct: 682 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 741

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ P++VTY I+++G C  G +  A + F +M  +G+  +   + T ++G ++  +T
Sbjct: 742 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 801

Query: 247 SKVVELLHRM 256
           S+   L   M
Sbjct: 802 SRAFSLQEEM 811



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 130/258 (50%), Gaps = 8/258 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L+  M++ G++ +A+ Y+ LI G+   G +  A  L   M + G    V TYN+ 
Sbjct: 592 EQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSF 651

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G CK   + +++   S+ML+  + P VV+YNTL +G   +  +  A  LFDE++   +
Sbjct: 652 IYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYL 711

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLE 177
                TYNT +DGLC+ G +    E+ + L+V     GI      Y+ L++G CK+G L 
Sbjct: 712 FPTIVTYNTLLDGLCRQGEL----EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLS 767

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E F  +   GL  +   Y   I G    G   +A  L  +M AKG  P+ + +N ++
Sbjct: 768 MAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 827

Query: 238 LGCIRNNETSKVVELLHR 255
            G  +     +  ELL +
Sbjct: 828 DGLCKLGNLEEASELLQK 845



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 116/218 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M+ +G  P    Y++ I G C  G +  A +    M  N  + +VV+YNT
Sbjct: 626 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 685

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC+  ++ ++  L+ E+ S  + PT+VTYNTL  GL    ++E A +L  EM +  
Sbjct: 686 LIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG 745

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  TY   ++G CK G +  A E F  +     EL   AY+  I G  K+G    A+
Sbjct: 746 IAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAF 805

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            L + +   G  P+++ YN+++ G C  G +++A +L 
Sbjct: 806 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 843



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 97/184 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A + L  M+   + P+   Y+TLI G+C  G + +A  LF  +        +VTYNT
Sbjct: 661 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 720

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C+  ++E +  L  EM+++GI P +VTY  L +G  ++  +  A + FDEM H  
Sbjct: 721 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 780

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++  Y T I G  K G    A  L   +        +  Y+ ++DGLCK+G LE A 
Sbjct: 781 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 840

Query: 181 ELFQ 184
           EL Q
Sbjct: 841 ELLQ 844



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 24/267 (8%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--INGCMHNVVTYNTLING------ 64
           Q G R + FV+  +++   +  + +  R  +  M+  IN  MH +V  + LI G      
Sbjct: 414 QPGFRRSEFVFCAILE---ILAQNNLMRSAYWVMERVINANMHRIV--DVLIGGCVSSEV 468

Query: 65  -----------YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
                      Y K   VE+ L+++ +M+   + P V   N +   L +   +  A++++
Sbjct: 469 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 528

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M    +     TYNT +D  CK G + +  +L   ++   C      Y+ LI+GL K 
Sbjct: 529 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 588

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G+ E A  L   + + GL  +  TYN +I+G+ N G + +A  L  +M  KG +P   T+
Sbjct: 589 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATY 648

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           N+ + G  +    S  ++ L  M   N
Sbjct: 649 NSFIYGLCKLGRMSDAMQQLSDMLANN 675



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 58/115 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +L   MI  G+ P+   Y+ L++G C  G +  A+E F  M   G   +   Y T
Sbjct: 731 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 790

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
            I G  K  D   + +L  EML+KG  P ++ YN +  GL ++  +E A +L  +
Sbjct: 791 RIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M+  G  P+ F Y+++IDG+C  G +  A ++       G + +  TY +LI
Sbjct: 303 EAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLI 362

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+  D++ ++N+++E + KG++P +V  NTL  GL +   +  ALKL +EM  +  +
Sbjct: 363 NGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCS 422

Query: 123 AETSTYNTFIDGLCKNGYIVEAAEL---------------FRTL-----RVLKCELGIE- 161
            +  TYN  I+GLCK G + +A  L               F TL     + LK +  IE 
Sbjct: 423 PDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEI 482

Query: 162 --------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                          Y+ +++GLCK GK E     F+ +   G +PN++TYNI+   FC 
Sbjct: 483 VDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCK 542

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             ++++A +L  +M+ KG+ P+ V F TLM G   N +     +L  R+DE+
Sbjct: 543 ARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 124/218 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + +  +++G++PN  + +TL+ G    G I +A +L   M  NGC  ++ TYN 
Sbjct: 371 IDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNL 430

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   V ++ NL  + ++KG  P V T+NTL  G  +  ++++A+++ D M +  
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+ +  TYN+ ++GLCK G   +    F+ +    C   I  Y+ L +  CK  K+E A 
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            L + +   GL P+VV +  ++ GFC++G +D A+ LF
Sbjct: 551 NLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF 588



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 129/257 (50%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+   I +G  P+ F ++TLIDG+C   ++D A E+   M  +G   +V+TYN+
Sbjct: 441 VSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNS 500

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK    E+ +  +  M+ KG  P ++TYN L     +  +VE AL L +EMQ+  
Sbjct: 501 ILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKG 560

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  +   + T + G C NG +  A +LF+ +    K    I  Y+ +I+       +  A
Sbjct: 561 LTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMA 620

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LF  +   G  P+  TY +MI GFC  G ++  +   L    KG+ P+  TF  ++  
Sbjct: 621 EKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNC 680

Query: 240 CIRNNETSKVVELLHRM 256
                   + V ++H M
Sbjct: 681 LCLKRRVHEAVGIIHLM 697



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 34/291 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++   M  +G+ P+ + ++  +  FC T     AR L  +M   GC  + V Y T+
Sbjct: 128 DQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTV 187

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+ +     E+  L+ EML  GI P ++ +N L H L     V+ + +L +++    V
Sbjct: 188 IGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGV 247

Query: 122 AAETSTYNTFID----------------------------------GLCKNGYIVEAAEL 147
           +    T N FI                                   GLCKN  +VEA   
Sbjct: 248 SPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHY 307

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
            R +     E     Y+ +IDG CK+G ++ A ++ +     G +P+  TY  +I+G C 
Sbjct: 308 LRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQ 367

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           DG +D+A ++F +   KG+ PN V  NTL+ G  +     + ++L++ M E
Sbjct: 368 DGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSE 418



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 9/236 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++D M   GV P+   Y+++++G C  G+ +     F  M   GC+ N++TYN 
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNI 535

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L   +CK + VEE+LNL  EM +KG+ P VV + TL  G  +   ++ A +LF  +    
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595

Query: 121 VAAET-STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGK 175
             + T +TYN  I+       +  A +LF  +    CE G       Y  +IDG CK G 
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKM----CENGFSPDSYTYRVMIDGFCKTGN 651

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           + + +         GL+P++ T+  +++  C   ++ +A  +   M  KG+ P  V
Sbjct: 652 INSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV 707



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 4/235 (1%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           VY   +  +   G+I  A ++F  MD   C  +V +YN ++N   + +  +++  +Y  M
Sbjct: 78  VYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRM 137

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
             KGI P V T+           +   A +L + M      +    Y T I G  +  + 
Sbjct: 138 RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHR 197

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
           VEA ELF  +  L     I A++ LI  LC+ G ++ +  L   + + G+ PN+ T NI 
Sbjct: 198 VEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF 257

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           I GFC    +++A  L LD   +G+ P+ +T+NTL+ G  +N    KVVE  H +
Sbjct: 258 IQGFCQRAMLNEAIRL-LDGVGRGLTPDVITYNTLICGLCKN---FKVVEAEHYL 308



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 1/239 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M      P+   Y+ +++        D+A ++++ M   G + +V T+  
Sbjct: 92  IQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTI 151

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +  +C+T     +  L + M S+G   + V Y T+  G +E +    A +LF+EM    
Sbjct: 152 RMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLG 211

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +N  I  LC+ G++ E+  L   +        +   +  I G C+   L  A 
Sbjct: 212 ICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAI 271

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L   + R GL P+V+TYN +I G C + ++ +A      M  +G  P+  T+N+++ G
Sbjct: 272 RLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDG 329



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 40/250 (16%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS--MDI-NGCMHNVVTYNTLINGYCKTK 69
           + G +     Y  +I+     GE +   E+     M+I NG +  V  Y   +  Y +  
Sbjct: 33  EDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGV--YIGAMRNYGRKG 90

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            ++E+++++  M      P+V +YN + + L E    + A K++  M+   +  +  T+ 
Sbjct: 91  KIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF- 149

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
                               T+R              +   C+  +   A  L  ++P  
Sbjct: 150 --------------------TIR--------------MKSFCRTSRPHAARRLLNNMPSQ 175

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G   + V Y  +I GF  +    +AH+LF +M   G+ P+ + FN L+    R     + 
Sbjct: 176 GCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQES 235

Query: 250 VELLHRMDER 259
             LL+++ +R
Sbjct: 236 ERLLNKVLKR 245



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A +L + M + G  P+++ Y  +IDGFC TG I+      +     G + ++ T+  
Sbjct: 617 MNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGR 676

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG 99
           ++N  C  + V E++ +   M+ KGI P VV  NT+F  
Sbjct: 677 VLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV--NTIFEA 713



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 45/224 (20%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI------------ 48
           ++EA  L++ M  +G+ P+   + TL+ GFC  G++D A +LF  +D             
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN 605

Query: 49  ------------------------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
                                   NG   +  TY  +I+G+CKT ++    +     + K
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+ P++ T+  + + L    +V  A+ +   M H  +  E    NT  +   K    V A
Sbjct: 666 GLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPE--VVNTIFEADKKE---VAA 720

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGL----CKIGKLETAWELFQ 184
            ++     + K  +   AY  L DG+        KL T+ ++F 
Sbjct: 721 PKIVVENLMKKGHITYFAYEILHDGIRDKKLSRKKLPTSQKVFS 764


>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
 gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
          Length = 321

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 136/260 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+++M +RG  PNA V++ ++D  C  G    A     +M   G    +VTYN 
Sbjct: 26  LTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTIVTYNL 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK + +  +L +  EM  +G  P  VTYNT  HGL +  +V+ AL LF  M    
Sbjct: 86  LIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKK 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y T IDGLC+ G + EA  L   +    C      Y+ ++  LCK  ++  A 
Sbjct: 146 IRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAH 205

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G++P+ +T+ +M+ G+C   ++D A  L   M++ G+AP  V +NTL+   
Sbjct: 206 KLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDAL 265

Query: 241 IRNNETSKVVELLHRMDERN 260
            R    S+   LL  M  R 
Sbjct: 266 NRAGRVSEAYRLLQEMISRG 285



 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 122/246 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++G  P    +  L+DG C    +  A EL   M   GC  N + +N +++  CK   
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             E+      M S G+ PT+VTYN L  G  +  ++  AL++  EM          TYNT
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F+ GLCK G + +A  LFR +   K  L +  Y+ LIDGLC+ GKL  A+ L   +   G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +P    YN ++   C   ++++AH LF  M   G+ P+ +TF  ++ G  R +     +
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 251 ELLHRM 256
            LL +M
Sbjct: 241 LLLQQM 246



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 131/255 (51%), Gaps = 2/255 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   ++ M   GV P    Y+ LIDGFC   ++ RA E+   M   G   N VTYNT +
Sbjct: 63  EAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V+++L L+  M  K IR  V  Y TL  GL +  ++  A  L DEM++S   
Sbjct: 123 HGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCV 182

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YN  +  LCK   I EA +LF+ +           +  ++ G C+  +++ A  L
Sbjct: 183 PKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLL 242

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q +   GL P  V YN +I      G++ +A+ L  +M ++G++PN  T+   ++   +
Sbjct: 243 LQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYA--LMRKQQ 300

Query: 243 NNETSKVVELLHRMD 257
            ++++ VVEL +R +
Sbjct: 301 TDDSNLVVELDYRKE 315



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 86/177 (48%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M  KG  PTVVT+  L  GL + +++  A +L + M           +N  +D LCK G 
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
             EA     T+R +     I  Y+ LIDG CK  KL  A E+ Q +   G  PN VTYN 
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
            +HG C  G++D A  LF  M  K +  +   + TL+ G  +  + ++   LL  M+
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME 177



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 72/134 (53%)

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+   +DGLCK   + +A EL   +    C      ++ ++D LCK G+   A+   +++
Sbjct: 12  TFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETM 71

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +G+ P +VTYN++I GFC + ++ +A ++  +M  +G  PN VT+NT + G  +  + 
Sbjct: 72  RSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV 131

Query: 247 SKVVELLHRMDERN 260
              + L   M E+ 
Sbjct: 132 DDALALFRAMTEKK 145



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 55/105 (52%)

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C   +  +  L+DGLCK  +L  A+EL + +   G  PN + +N ++   C +G+  +A+
Sbjct: 6   CIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAY 65

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
                M + GV+P  VT+N L+ G  +  +  + +E+L  M  R 
Sbjct: 66  GFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRG 110



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 45/93 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L   M   G+ P+   +  ++ G+C    ID A  L   M   G     V YNT
Sbjct: 201 INEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNT 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           LI+   +   V E+  L  EM+S+G+ P   TY
Sbjct: 261 LIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 132/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M    +RPN   YS LID FC +G +D A   F  M  +G    V  YN+
Sbjct: 381 LDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  D+  + +L+ EM +KG+ PT  T+ +L  G  +  QV+ A KL+++M  + 
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   I GLC    + EA+ELF  L   K +     Y+ LI+G C+ GK++ A+
Sbjct: 501 ITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAF 560

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           EL + + + GL+P+  TY  +I G C+ G++ KA D   D+  + V  N + ++ L+ G
Sbjct: 561 ELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHG 619



 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 141/260 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L+  + + G  PN FVY+ LI+  C  G++D+A  L+ +M +     N +TY+ 
Sbjct: 346 IDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSI 405

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C++  ++ +++ +  M+  GI  TV  YN+L +G  +   +  A  LF EM +  
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG 465

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    +T+ + I G CK+  + +A +L+  +        +  ++ LI GLC   K+  A 
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  L    + P  VTYN++I G+C DG++DKA +L  DM  KG+ P+  T+  L+ G 
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585

Query: 241 IRNNETSKVVELLHRMDERN 260
                 SK  + +  + ++N
Sbjct: 586 CSTGRVSKAKDFIDDLHKQN 605



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 132/254 (51%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +L+D M++ G  P     S L+DG    G+ID A EL V +   G + N+  YN LIN  
Sbjct: 316 QLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSL 375

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK  D++++  LYS M    +RP  +TY+ L        +++ A+  FD M    +    
Sbjct: 376 CKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETV 435

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             YN+ I+G CK G +  A  LF  +     E     ++ LI G CK  +++ A++L+  
Sbjct: 436 YAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNK 495

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G+ PNV T+  +I G C+  +M +A +LF ++  + + P  VT+N L+ G  R+ +
Sbjct: 496 MIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGK 555

Query: 246 TSKVVELLHRMDER 259
             K  ELL  M ++
Sbjct: 556 IDKAFELLEDMHQK 569



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 35/285 (12%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L D  +  GVRP+ +  S ++   C   +  RA+E    M+ NG   ++VTYN LI+G C
Sbjct: 212 LFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLC 271

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   V E++ +   +  KG+   VVTY TL  G   + Q E  ++L DEM     +   +
Sbjct: 272 KGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEA 331

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
             +  +DGL K G I +A EL   +        +  Y+ LI+ LCK G L+ A  L+ ++
Sbjct: 332 AVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNM 391

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMD---------------------------------- 212
             + L PN +TY+I+I  FC  G++D                                  
Sbjct: 392 SLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDL 451

Query: 213 -KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             A  LF++M  KGV P   TF +L+ G  ++ +  K  +L ++M
Sbjct: 452 SAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKM 496



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 131/295 (44%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  L   M  +GV P A  +++LI G+C   ++ +A +L+  M  NG   NV T+  
Sbjct: 451 LSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTA 510

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C T  + E+  L+ E++ + I+PT VTYN L  G     +++ A +L ++M    
Sbjct: 511 LISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKG 570

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL---- 176
           +  +T TY   I GLC  G + +A +    L     +L    YS L+ G C+ G+L    
Sbjct: 571 LVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEAL 630

Query: 177 -------------------------------ETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                                          +T ++L + +   GL P+ V Y  MI  +
Sbjct: 631 SASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTY 690

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +G   KA + +  M  +   PN VT+  LM G  +  E  +   L  RM   N
Sbjct: 691 SKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAAN 745



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 34/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LL+ M Q+G+ P+ + Y  LI G C TG + +A++    +       N + Y+ 
Sbjct: 556 IDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSA 615

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC+   + E+L+   EM+ +GI   +V +  L  G  +    +    L  +M    
Sbjct: 616 LLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQG 675

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y + ID   K G   +A E +  +   +C   +  Y+ L++GLCK G+++ A 
Sbjct: 676 LRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAG 735

Query: 181 ELFQSLPRV----------------------------------GLMPNVVTYNIMIHGFC 206
            LF+ +                                     GL+ N VT+NI+I GFC
Sbjct: 736 LLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFC 795

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             G+  +A  +  +M   G+ P+CVT++TL+    R+      V+L   M  R
Sbjct: 796 KLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNR 848



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 3/250 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MIQRG+  +   ++ LIDG     +     +L   M   G   + V Y ++I+ Y K   
Sbjct: 636 MIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGS 695

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +++   +  M+++   P VVTY  L +GL +  +++ A  LF  MQ ++V   + TY  
Sbjct: 696 FKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGC 755

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           F+D L K G + EA  L   +  LK  L     ++ +I G CK+G+   A ++   +   
Sbjct: 756 FLDNLTKEGNMKEAIGLHHAM--LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTEN 813

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ P+ VTY+ +I+ +C  G +  +  L+  M  +G+ P+ V +N L+ GC  N E  K 
Sbjct: 814 GIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKA 873

Query: 250 VELLHRMDER 259
            EL   M  R
Sbjct: 874 FELRDDMLRR 883



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 1/223 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M  +G+RP+  +Y+++ID +   G   +A E +  M    C  NVVTY  L+NG C
Sbjct: 667 LLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLC 726

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K  +++ +  L+  M +  + P  +TY      L +   ++ A+ L   M    + A T 
Sbjct: 727 KAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKG-LLANTV 785

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N  I G CK G   EA ++   +           YS LI   C+ G +  + +L+ ++
Sbjct: 786 THNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTM 845

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
              GL P++V YN++I+G C +G++DKA +L  DM  +G+ P+
Sbjct: 846 LNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 116/254 (45%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++ LM    + P     S L++G     +     ELF      G   +  T + ++
Sbjct: 173 DAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVV 232

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C+ KD   +      M + G   ++VTYN L HGL +  +V  A+++   +    +A
Sbjct: 233 RSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLA 292

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+  TY T + G C+        +L   +  L       A S L+DGL K GK++ A+EL
Sbjct: 293 ADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYEL 352

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R G +PN+  YN +I+  C  G +DKA  L+ +M    + PN +T++ L+    R
Sbjct: 353 VVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCR 412

Query: 243 NNETSKVVELLHRM 256
           +      +    RM
Sbjct: 413 SGRLDVAISYFDRM 426



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 34/179 (18%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--------------- 47
           +A    DLM+     PN   Y+ L++G C  GE+DRA  LF  M                
Sbjct: 698 KAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFL 757

Query: 48  -------------------INGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
                              + G + N VT+N +I G+CK     E+  + SEM   GI P
Sbjct: 758 DNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFP 817

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
             VTY+TL +       V  ++KL+D M +  +  +   YN  I G C NG + +A EL
Sbjct: 818 DCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFEL 876



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 8/144 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  L   M+ +G+  N   ++ +I GFC  G    A ++   M  NG   + VTY+T
Sbjct: 766 MKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYST 824

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YC++ +V  S+ L+  ML++G+ P +V YN L +G     +++ A +L D+M    
Sbjct: 825 LIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRG 884

Query: 121 VAAETSTYNTFIDGLCKNGYIVEA 144
           +  +          L K G I EA
Sbjct: 885 IIPDNKY-------LQKKGTIFEA 901


>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 418

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 131/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 187 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ L  GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 127 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 186

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 187 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 246

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 306

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L  G  +   +    
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAE 366

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 367 KMLREM 372



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 136/253 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   Y+TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A  L   + V   +     Y+ LIDG CK G L++A+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + +  +  + V Y  +  G C +G+   A  +  +M + G+ P+  T+  ++    + 
Sbjct: 335 KRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKK 394

Query: 244 NETSKVVELLHRM 256
            +  K  +LL  M
Sbjct: 395 GDVWKGSKLLKEM 407



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AH L  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 319 DGCCKEGDLDSAFEHRKRMIQEN 341



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 302


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 143/258 (55%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  + L+ M+  G  P+    +TLI GFC  G+  +A ++   ++ +G + +V+TYN 
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK  ++  +L++   M    + P VVTYNT+   L +  +++ A+++ D M   D
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   I+  C++  + +A +L   +R   C   +  Y+ L++G+CK G+L+ A 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    +P  G  PNV+T+NI++   C+ G+   A  L  DM  KG +P+ VTFN L+   
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 241 IRNNETSKVVELLHRMDE 258
            R     + +++L +M +
Sbjct: 355 CRKGLLGRAIDILEKMPK 372



 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M  RG  P+   Y+ L++G C  G +D A +    M  +GC  NV+T+N ++
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVT------------------------------ 92
              C T    ++  L ++ML KG  P+VVT                              
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ 376

Query: 93  -----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                YN L HG  +  +++ A++  + M       +  TYNT +  LCK+G + +A E+
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              L    C   +  Y+ +IDGL K GK   A +L   +    L P+ +TY+ ++ G   
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +G++D+A   F + E  GV PN VTFN++MLG  +  +T + ++ L  M  R
Sbjct: 497 EGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR 548



 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 139/260 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +LD M+QR   P+   Y+ LI+  C    + +A +L   M   GC  +VVTYN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   ++E++   ++M S G +P V+T+N +   +    +   A KL  +M    
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    T+N  I+ LC+ G +  A ++   +    C+    +Y+ L+ G CK  K++ A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E  + +   G  P++VTYN M+   C DG+++ A ++   + +KG +P  +T+NT++ G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  +T K ++LL  M  ++
Sbjct: 460 AKAGKTGKAIKLLDEMRAKD 479



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  M+++G  P+   ++ LI+  C  G + RA ++   M  +GC  N ++YN L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL 386

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K ++ ++     M+S+G  P +VTYNT+   L +  +VE A+++ +++     +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G   +A +L   +R    +     YS L+ GL + GK++ A + 
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F    R+G+ PN VT+N ++ G C   Q D+A D  + M  +G  P   ++  L+ G   
Sbjct: 507 FHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAY 566

Query: 243 NNETSKVVELLHRM 256
                + +ELL+ +
Sbjct: 567 EGMAKEALELLNEL 580



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 139/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E +  L ++ +  V P+   Y+T++   C +G++ +A E+   M    C  +V+TY  LI
Sbjct: 187 EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C+   V +++ L  EM  +G  P VVTYN L +G+ +  +++ A+K  ++M  S   
Sbjct: 247 EATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +  +C  G  ++A +L   +        +  ++ LI+ LC+ G L  A ++
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +P+ G  PN ++YN ++HGFC + +MD+A +    M ++G  P+ VT+NT++    +
Sbjct: 367 LEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426

Query: 243 NNETSKVVELLHRMDER 259
           + +    VE+L+++  +
Sbjct: 427 DGKVEDAVEILNQLSSK 443



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 122/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M + G +PN+  Y+ L+ GFC   ++DRA E    M   GC  ++VTYNT
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK   VE+++ + +++ SKG  P ++TYNT+  GL +  +   A+KL DEM+  D
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T TY++ + GL + G + EA + F     +        ++ ++ GLCK  + + A 
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAI 539

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +    +   G  P   +Y I+I G   +G   +A +L  ++  KG+
Sbjct: 540 DFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 3/201 (1%)

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           V  N  +    +T ++EE       M+  G  P ++   TL  G   + +   A K+ + 
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           ++ S    +  TYN  I G CK G I  A  +   + V      +  Y+ ++  LC  GK
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGK 219

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           L+ A E+   + +    P+V+TY I+I   C D  + +A  L  +M  +G  P+ VT+N 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+ G  +     + ++ L+ M
Sbjct: 280 LVNGICKEGRLDEAIKFLNDM 300



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 69/125 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M  + ++P+   YS+L+ G    G++D A + F   +  G   N VT+N+++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIM 526

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CKT+  + +++    M+++G +PT  +Y  L  GL      + AL+L +E+ +  + 
Sbjct: 527 LGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586

Query: 123 AETST 127
             +S 
Sbjct: 587 KRSSA 591



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 112/237 (47%), Gaps = 10/237 (4%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           S+  +GFCL  +  R  +    +D++G      + ++ +  + + ++    ++  S++ S
Sbjct: 8   SSAQEGFCLIQQFHRECKRGNKLDVSG--RTTRSISSKVPLWSRKRNRLVLVSAASQVES 65

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G+      ++TL  G    H   +    F     S V  +  + N  +  L + G + E
Sbjct: 66  SGLNGRAQKFDTLASG----HSNSNGNGHFSSANSSFVLEDVES-NNHLRQLVRTGELEE 120

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
             +    +        I   + LI G C++GK   A ++ + L   G +P+V+TYN+MI 
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMIS 180

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G+C  G+++ A  +   M    V+P+ VT+NT++     + +  + +E+L RM +R+
Sbjct: 181 GYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 141/240 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+ +   M++ G +PN+ VY+ LI+GFC   +I+ A ++++ M  NGC   ++TYNTLI
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK +  +E+ +L  EML +G +P + TY +L  GL    +V+ AL+++DE+  + + 
Sbjct: 517 DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQ 576

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   +N  I GLC  G + EA  ++  ++   C   +  Y+ L+DG  +IG ++ A  L
Sbjct: 577 VDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASL 636

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           + ++   GL P++VTYN  I G C+  +  +   L  ++ A G+ P  +T++ L+   I+
Sbjct: 637 WTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696



 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 130/238 (54%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + F YS++I+ FC  G    A E++ +M  +GC  N   YN LING+C+   + +++ +Y
Sbjct: 438 DVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIY 497

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM S G  PT++TYNTL  GL +  + + A  L  EM       +  TY + I GLC++
Sbjct: 498 IEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRD 557

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             +  A  ++  +     ++ +  ++ LI GLC  GK++ A+ ++  +      PN+VTY
Sbjct: 558 KKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTY 617

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N ++ GF   G +DKA  L+  +   G+ P+ VT+NT + G    N T + V LL+ +
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEV 675



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 131/240 (54%), Gaps = 1/240 (0%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA+ LL  L       P+   + TLI G C  G  +RA E+      +G   +V +Y+
Sbjct: 384 VSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYS 443

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++IN +CK     ++  +Y  M+  G +P    YN L +G   + ++  A+K++ EM  +
Sbjct: 444 SMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSN 503

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TYNT IDGLCK     EA+ L + +     +  I  Y+ LI GLC+  K++ A
Sbjct: 504 GCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVA 563

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             ++  +   GL  +V+ +NI+IHG C+ G++D+A  ++L+M+ K  +PN VT+NTLM G
Sbjct: 564 LRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDG 623



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 133/258 (51%), Gaps = 2/258 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M+    + +   Y  LI G C +G++D A  ++  M   G + +V  YN+LI
Sbjct: 282 EAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLI 341

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH-SDV 121
            G+C+     E+   +      GIR  + TYN +  GL +   V  A +L  ++++ +  
Sbjct: 342 KGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASC 400

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  T+ T I GLC+NGY   A E+    R    EL + +YS +I+  CK G+   A E
Sbjct: 401 SPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANE 460

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +++++ + G  PN   YN +I+GFC   +++ A  ++++M + G  P  +T+NTL+ G  
Sbjct: 461 VYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLC 520

Query: 242 RNNETSKVVELLHRMDER 259
           +  +  +   L   M ER
Sbjct: 521 KAEKYQEASSLTKEMLER 538



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 2/245 (0%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           R + PN   Y+ ++   C  G++DRA  LF S+   G   + VTY+TL++G  K   ++ 
Sbjct: 152 RRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDN 211

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET-STYNTFI 132
           +L+L  EM + G++   V YN L  G F     E A+K+++++     A+   +TY   +
Sbjct: 212 ALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVML 271

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           DGLCK G   EA E++  +     +     Y  LI GLC+ G +++A  ++  + + GL+
Sbjct: 272 DGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLV 331

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            +V  YN +I GFC  G+  +A   +      G+     T+N +  G + +   S+  EL
Sbjct: 332 LDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATEL 390

Query: 253 LHRMD 257
           L +++
Sbjct: 391 LKQLE 395



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 135/262 (51%), Gaps = 5/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L   + +RGV P+   YSTL+ G     ++D A +L   M   G   + V YN 
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233

Query: 61  LINGYCKTKDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L++G  +T   E+++ ++ +++   G  P + TY  +  GL ++ + + A +++  M  +
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  A+T TY   I GLC++G +  AA ++  +      L +  Y+ LI G C++G+   A
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTLML 238
           W+ + S    G+   + TYNIM  G  + G + +A +L   +E     +P+ VTF TL+ 
Sbjct: 354 WKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIH 412

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G   N   ++  E+L   D RN
Sbjct: 413 GLCENGYANRAFEILE--DARN 432



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 105/211 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A ++   M   G  P    Y+TLIDG C   +   A  L   M   G   ++ TY +
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+ K V+ +L ++ E+L  G++  V+ +N L HGL    +V+ A  ++ EM+  +
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT +DG  + G I +AA L+  +     +  I  Y+  I GLC   +     
Sbjct: 610 CSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGV 669

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
            L   +   G+MP V+T++I++      G +
Sbjct: 670 LLLNEVLATGIMPTVITWSILVRAVIKYGPI 700



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 61/107 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +   M ++   PN   Y+TL+DGF   G ID+A  L+ ++  NG   ++VTYNT
Sbjct: 595 VDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNT 654

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE 107
            I G C      E + L +E+L+ GI PTV+T++ L   + +   ++
Sbjct: 655 RIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)

Query: 144 AAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG----LMPNVVTY 198
           A   FR L  +L C  G+ +++ L+D   +  +   A   F SL        + PN+ TY
Sbjct: 102 ALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           NI++   C  G +D+A  LF  +  +GVAP+ VT++TLM G  ++++    ++LL  M
Sbjct: 162 NIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 131/227 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EAS +L+ M+   + PN   +S LI+ FC  G +  AR +  +M   G   NVVTY++L+
Sbjct: 98  EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 157

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGY    +V E+  L+  M++KG +P V +YN L +G  +  ++  A +LF+EM H  + 
Sbjct: 158 NGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 217

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YNT IDGLC+ G + EA +LF+ +        +  YS L+DG CK G L  A+ L
Sbjct: 218 PDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 277

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           F+++    L PN+V YNI+I   C    + +A  LF ++  +G+ PN
Sbjct: 278 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 324



 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 132/229 (57%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG +P+   Y+T+I+G C  GE   A  LF  M   GC  +VVTY+T+I+  CK + 
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L+++S M +KGI P + TYN+L  GL    +   A  + +EM   ++     T++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+  CK G + EA  + +T+  +  E  +  YS L++G     ++  A +LF  +   G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             P+V +YNI+I+G+C   ++ +A  LF +M  +G+ P+ V++NTL+ G
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDG 229



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 130/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +   M  +G+ PN F Y++LI G C       A  +   M     M N+VT++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +CK  +V E+  +   M   G+ P VVTY++L +G     +V  A KLFD M    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YN  I+G CK   I EA +LF  +        I +Y+ LIDGLC++G+L  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF+++   G +P++ TY+I++ GFC  G + KA  LF  M++  + PN V +N L+
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 116/198 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  M + GV PN   YS+L++G+ L  E+  AR+LF  M   GC  +V +YN LI
Sbjct: 133 EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILI 192

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK K + E+  L++EM+ +G+ P +V+YNTL  GL ++ ++  A  LF  M  +   
Sbjct: 193 NGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNL 252

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  +DG CK GY+ +A  LFR ++    +  +  Y+ LID +CK   L+ A +L
Sbjct: 253 PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKL 312

Query: 183 FQSLPRVGLMPNVVTYNI 200
           F  L   GL PN+  + +
Sbjct: 313 FSELFVQGLQPNMKHWKL 330



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 61/101 (60%)

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           +  Y+ +I+GLCKIG+   A  LF+ +   G  P+VVTY+ +I   C D ++++A D+F 
Sbjct: 10  VHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFS 69

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            M+AKG++PN  T+N+L+ G    +   +   +L+ M   N
Sbjct: 70  YMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 110


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 136/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+R++  M +R + P+ F ++ LID     G +  A E +  M       ++VTY+ LI
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C    ++E+  ++  M+SKG  P VVTY+ L +G  +  +VEH +KLF EM    V 
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TY   I G C+ G +  A E+FR +        I  Y+ L+ GLC  GK+E A  +
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + G+  ++VTYNI+I G C  G++  A D++  +  +G+ P+  T+ T+MLG  +
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478

Query: 243 NNETSKVVELLHRMDE 258
                +   L  +M E
Sbjct: 479 KGLRREADALFRKMKE 494



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 140/256 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + D M+  G +PN  +Y+T+IDG C + ++D A +L   M+ +G   +VVTYN+LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C +    ++  + S M  + I P V T+N L     +  +V  A + ++EM    + 
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  I GLC    + EA E+F  +    C   +  YS LI+G CK  K+E   +L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + + G++ N VTY I+I G+C  G+++ A ++F  M   GV PN +T+N L+ G   
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 243 NNETSKVVELLHRMDE 258
           N +  K + +L  M +
Sbjct: 409 NGKIEKALVILADMQK 424



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 122/229 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA    + MI+R + P+   YS LI G C+   +D A E+F  M   GC  +VVTY+ 
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK+K VE  + L+ EM  +G+    VTY  L  G     ++  A ++F  M    
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  + GLC NG I +A  +   ++    +  I  Y+ +I G+CK G++  AW
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           +++ SL   GLMP++ TY  M+ G    G   +A  LF  M+  G+ PN
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 133/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A   L  MI+ G  P+   + +L++GFC    +  A  +F  M   G   NVV YNT+I+
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK+K V+ +L+L + M   GI P VVTYN+L  GL    +   A ++   M   ++  
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+N  ID   K G + EA E +  +     +  I  YS LI GLC   +L+ A E+F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G  P+VVTY+I+I+G+C   +++    LF +M  +GV  N VT+  L+ G  R 
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374

Query: 244 NETSKVVELLHRM 256
            + +   E+  RM
Sbjct: 375 GKLNVAEEIFRRM 387



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 138/253 (54%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M   G+  N    + L++ FC   ++  A      M   G   ++VT+ +L+NG+C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   V ++L ++ +M+  G +P VV YNT+  GL +  QV++AL L + M+   +  +  
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN+ I GLC +G   +A  +   +   +    +  ++ LID   K G++  A E ++ +
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R  L P++VTY+++I+G C   ++D+A ++F  M +KG  P+ VT++ L+ G  ++ + 
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342

Query: 247 SKVVELLHRMDER 259
              ++L   M +R
Sbjct: 343 EHGMKLFCEMSQR 355



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 35/260 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  L   M+Q    P+   +S L+       + D    L+  M + G  HN+ T N 
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N +C+   +  +L+   +M+  G  P++VT+ +L                        
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL------------------------ 157

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                      ++G C+   + +A  +F  +  +  +  +  Y+ +IDGLCK  +++ A 
Sbjct: 158 -----------LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   + + G+ P+VVTYN +I G C+ G+   A  +   M  + + P+  TFN L+  C
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++    S+  E    M  R+
Sbjct: 267 VKEGRVSEAEEFYEEMIRRS 286



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 20/218 (9%)

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIR--------------------PTVVTYNTLFHGLF 101
           I G+C ++    + + Y EML  GIR                    P++  ++ L   + 
Sbjct: 33  ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           ++ + +  + L+++MQ   +     T N  ++  C+   +  A      +  L  E  I 
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            +  L++G C+  ++  A  +F  +  +G  PNVV YN +I G C   Q+D A DL   M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           E  G+ P+ VT+N+L+ G   +   S    ++  M +R
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 136/260 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+L+ M   GV  +A V++T+I GFC  G++  AR LF  M   G   + VT+  
Sbjct: 338 VSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTA 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+  +++E+  +  EM+ KG+   VVTY  L  G  +   +  A ++ +EM    
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR 457

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA    TY    DGLCK G +  A EL   +     EL +  Y+ LI+GLCK G LE A 
Sbjct: 458 VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAM 517

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   G   +V TY  +I   C  G+ D+AH++  +M  KG+ P+  T+N LM G 
Sbjct: 518 RIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGF 577

Query: 241 IRNNETSKVVELLHRMDERN 260
             +       +LL  M E+N
Sbjct: 578 CMSGRVEGGKKLLEWMLEKN 597



 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 140/257 (54%), Gaps = 3/257 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RL + M +RG+  +   ++ LI+G C  GE+  A  +   M   G   +VVTY  LI+
Sbjct: 376 ARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLID 435

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK  ++ E+  +++EM+ + + P VVTY  L  GL +   V  A +L  EM +  +  
Sbjct: 436 GYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL 495

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ I+GLCK G + +A  +   +        +  Y+ LID LCK G+ + A  + 
Sbjct: 496 NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNML 555

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
           Q +   G+ P++ TYN++++GFC  G+++    L   M  K V PN VT+N+LM   CI 
Sbjct: 556 QEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCID 615

Query: 243 NN--ETSKVVELLHRMD 257
            N   T+++ + +H  +
Sbjct: 616 KNMKSTTEIYKGMHSQE 632



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 127/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA R+L  M+ +G+  +   Y+ LIDG+C  G +  A  +   M       NVVTY  
Sbjct: 408 LKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTA 467

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G CK  DV  +  L  EM +KG+   V TYN+L +GL +   +E A+++  EM+ + 
Sbjct: 468 LSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAG 527

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T ID LCK+G    A  + + +     +  I  Y+ L++G C  G++E   
Sbjct: 528 HRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGK 587

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +    + PNVVTYN ++  +C D  M    +++  M ++ VAPN  T+N L+ G
Sbjct: 588 KLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKG 646



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 132/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +LLD M  +G+  NA VY+++I   C  G++  A  +   M ++G   + V + T
Sbjct: 303 LENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTT 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+C   D+  +  L+ EM  +G+    VT+  L +GL    +++ A ++  EM    
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   IDG CK G +VEA  +   +   +    +  Y+ L DGLCK G +  A 
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAAN 482

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL  NV TYN +I+G C  G +++A  +  +MEA G   +  T+ TL+   
Sbjct: 483 ELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTL 542

Query: 241 IRNNETSKVVELLHRM 256
            ++ E  +   +L  M
Sbjct: 543 CKSGEFDRAHNMLQEM 558



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 120/240 (50%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   Y T++ G+C+ GE++ A +L   M   G   N   Y ++I   C    V ++L +
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRV 344

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +M   G+    V + T+  G      +  A +LF+EMQ   +AA+  T+   I+GLC+
Sbjct: 345 LEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCR 404

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G + EA  + + +     ++ +  Y+ LIDG CK G +  A+ +   +    + PNVVT
Sbjct: 405 AGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVT 464

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  +  G C  G +  A++L  +M  KG+  N  T+N+L+ G  +     + + ++  M+
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 117/237 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA R+ + M+ R V PN   Y+ L DG C  G++  A EL   M   G   NV TYN+
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  ++E+++ + +EM + G R  V TY TL   L +  + + A  +  EM    
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +TYN  ++G C +G +    +L   +        +  Y+ L+   C    +++  
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTT 622

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E+++ +    + PN  TYNI+I G C    M +A     +M  KG+     +++ L+
Sbjct: 623 EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALI 679



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 2/232 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ LL  M  +G+  N + Y++LI+G C  G +++A  +   M+  G   +V TY TLI+
Sbjct: 481 ANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLID 540

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK+ + + + N+  EML KGI+P++ TYN L +G     +VE   KL + M   +V  
Sbjct: 541 TLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRP 600

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN+ +   C +  +    E+++ +   +       Y+ LI G CK   ++ A    
Sbjct: 601 NVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFH 660

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA--PNCVTF 233
           Q +   GL     +Y+ +I       +  +A   F  M  +G+   P+  +F
Sbjct: 661 QEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 2/200 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R++  M   G R + + Y+TLID  C +GE DRA  +   M   G   ++ TYN 
Sbjct: 513 LEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNV 572

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C +  VE    L   ML K +RP VVTYN+L         ++   +++  M   +
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE 632

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA   +TYN  I G CK   + EA    + +      L   +YS LI  L K  K   A 
Sbjct: 633 VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEAR 692

Query: 181 ELFQSLPRVGLM--PNVVTY 198
             F  +   GL   P+V ++
Sbjct: 693 VFFDKMRNEGLTAEPDVYSF 712



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 7/189 (3%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E++ L+ E+  K     V ++N L   L    +++ A + FDEM       +  TY T
Sbjct: 240 LDEAIALFRELPDKN----VCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGT 292

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            + G C  G +  A +L   +     E     Y+ +I  LC  G++  A  + + +   G
Sbjct: 293 MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHG 352

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           +  + V +  +I GFC+ G +  A  LF +M+ +G+A + VT   L+ G  R  E  +  
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412

Query: 251 ELLHRMDER 259
            +L  M ++
Sbjct: 413 RVLQEMVDK 421


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 136/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A   LD M+++G  PN   Y+ LIDGFC  G  + A ++  SM   G   N V YN LI
Sbjct: 390 SALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLI 449

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK   ++++L +Y EM SKG +P + T+N+L +GL +  ++E AL L+ +M    V 
Sbjct: 450 GALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVI 509

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T TYNT I    +   I +A +L   +R   C L    Y+ LI  LCK G  E    L
Sbjct: 510 ANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGL 569

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +    + P++ + NI+I+ FC  G+++ A     DM  +G+ P+ VT+N+L+ G  +
Sbjct: 570 IEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK 629

Query: 243 NNETSKVVELLHRMDER 259
                + + L + +  +
Sbjct: 630 MGRFQEALNLFNGLQAK 646



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 131/281 (46%), Gaps = 32/281 (11%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG+ P  + +  ++  FC+  E+D A  L   M  +GC+ N + Y  LI+   +   
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E++ L  EM   G  P V T+N + HGL +  ++  A KL D M   D  A+      
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310

Query: 131 FIDGLCK--------------------------NGYIV-----EAAE-LFRTLRVLKCEL 158
            + GLC+                          NGY+V     EA + L++ + +   E 
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               ++ +IDGLCK G L +A E    + + G  PNV+TY I+I GFC  G  ++A  + 
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             M AKG++ N V +N L+    ++ +    +++   M  +
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSK 471



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL-FVSMDINGCMHNVVTYNTLINGYCKTK 69
           M+ +   PN  +Y+TLI+G+ ++G  + A++L + +M I G   +  T+N +I+G CK  
Sbjct: 327 MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKG 386

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            +  +L    EM+ KG  P V+TY  L  G  +    E A K+ + M    ++  T  YN
Sbjct: 387 YLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYN 446

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I  LCK+G I +A +++  +    C+  I  ++ LI GLCK  K+E A  L++ +   
Sbjct: 447 CLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLE 506

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G++ N VTYN +IH F     + +A  L  +M  +G   + +T+N L+    +   T K 
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566

Query: 250 VELLHRM 256
           + L+ +M
Sbjct: 567 LGLIEQM 573



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 132/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++   M  +G +P+ + +++LI G C   +++ A  L+  M + G + N VTYNT
Sbjct: 458 IQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNT 517

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + + + ++++  L  EM  +G     +TYN L   L +    E  L L ++M   +
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    ++ N  I+  C+ G + +A +  R +        I  Y+ LI+GLCK+G+ + A 
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L   G+ P+ VTYN +I  +C +G  + A  L     + G  PN +T++ L+   
Sbjct: 638 NLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYF 697

Query: 241 IRNNETSKVVELL 253
           ++NN  S+   +L
Sbjct: 698 VKNNSDSEQFTIL 710



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 10/261 (3%)

Query: 3   EASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +A+RLL D+       P    Y+ +++          A  +F  M   G    V T+  +
Sbjct: 147 QATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVV 206

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +  +C   +V+ + +L  +M   G  P  + Y  L H L E ++V  A+KL +EM     
Sbjct: 207 MKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGC 266

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRT--LRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             +  T+N  I GLCK G I EAA+L     LR    +  I+ Y  L+ GLC++GK++ A
Sbjct: 267 EPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY--LMHGLCRMGKVDEA 324

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD-LFLDMEAKGVAPNCVTFNTLML 238
             +   +P     PN V YN +I+G+   G+ ++A D L+ +M   G  P+  TFN ++ 
Sbjct: 325 RAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMID 380

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  +       +E L  M ++
Sbjct: 381 GLCKKGYLVSALEFLDEMVKK 401



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 1/250 (0%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +QRG   +  VY  LID     GE     +L   M   GC+     +  ++  Y K    
Sbjct: 86  LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLP 145

Query: 72  EESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            ++  L  +M       PT  +YN +   L   +  + A  +F +M    ++    T+  
Sbjct: 146 GQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGV 205

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +   C    +  A  L R +    C      Y  LI  L +  ++  A +L + +  +G
Sbjct: 206 VMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMG 265

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+V T+N +IHG C  G++ +A  L   M  +    + +    LM G  R  +  +  
Sbjct: 266 CEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR 325

Query: 251 ELLHRMDERN 260
            +L ++   N
Sbjct: 326 AMLSKIPNPN 335


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LL LM+Q G++ +  V++ LI  +    ++D    +F  M   G   N V Y T+I
Sbjct: 165 EMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVI 224

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +++++  + +M+ KG+ P VV Y +L H L    + E A +L  E+    + 
Sbjct: 225 DGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGIN 284

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                +NT +D LCK G ++E+ +LF  L  +     +  YS LIDG C  GK++ A +L
Sbjct: 285 PNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKL 344

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +  VGL P+ VTY+ +I+G+C   +M+ A  LF +ME+ GV P+ +T+N ++ G  R
Sbjct: 345 LTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFR 404

Query: 243 NNETSKVVELLHRMDE 258
              T+   EL  R+ E
Sbjct: 405 TRRTAAAKELYARITE 420



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 127/245 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   +   M Q+G+ PNA  Y T+IDG C  G +D A   F  M   G   NVV Y +
Sbjct: 198 VDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTS 257

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C     E++  L  E+L +GI P +V +NT+   L +  +V  + KLFD + H  
Sbjct: 258 LIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIG 317

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY+T IDG C  G +  A +L   +  +  +     YS LI+G CKI ++E A 
Sbjct: 318 VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDAL 377

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G+ P+++TYNI++HG     +   A +L+  +   G      T+N +++  
Sbjct: 378 ALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDF 437

Query: 241 IRNNE 245
            + N 
Sbjct: 438 AKTNS 442



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 135/281 (48%), Gaps = 42/281 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ R V P+A  Y+++I        +DRA E+   M     M N  TYN++++GYC +  
Sbjct: 37  MLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQ 92

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            E+++ ++ +M S GI P VVTYN+L   L +  +   A K+FD M    +  + +TY T
Sbjct: 93  SEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGT 152

Query: 131 FIDGLCKNGYIVEAAELF------------RTLRVLKC-------------------ELG 159
            + G    G +VE  +L                 +L C                   + G
Sbjct: 153 LLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG 212

Query: 160 IEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           +      Y  +IDGLCK+G+L+ A   F+ +   GL PNVV Y  +IH  C   + +KA 
Sbjct: 213 LTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAE 272

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNN---ETSKVVELL 253
           +L  ++  +G+ PN V FNT++    +     E+ K+ +LL
Sbjct: 273 ELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLL 313



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 85/148 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+ +L DL+   GV P+   YSTLIDG+CL G++D A +L   M   G   + VTY+TLI
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   +E++L L+ EM S G+ P ++TYN + HGLF   +   A +L+  +  S   
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ 424

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRT 150
            E STYN  +    K   ++     FRT
Sbjct: 425 LELSTYNIILMDFAKTNSLMMHFGCFRT 452



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 12/213 (5%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  +VV+YNT+I+G  K  DV+++   Y EML + + P  VTYN++   L +   ++ A+
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCL 166
           ++   M    V     TYN+ + G C +G   +A  +FR +    C  GIE     Y+ L
Sbjct: 67  EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKM----CSDGIEPDVVTYNSL 118

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +D LCK GK   A ++F S+ + GL P++ TY  ++HG+ + G + + HDL   M   G+
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +   FN L+    +  +  +VV +  +M ++
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQ 211



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 103/184 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L+  ++ +G+ PN   ++T++D  C  G +  +++LF  +   G   +V+TY+TL
Sbjct: 269 EKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTL 328

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC    ++ ++ L + M+S G++P  VTY+TL +G  +I+++E AL LF EM+ + V
Sbjct: 329 IDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGV 388

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  + GL +      A EL+  +     +L +  Y+ ++    K   L   + 
Sbjct: 389 NPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFG 448

Query: 182 LFQS 185
            F++
Sbjct: 449 CFRT 452


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 145/256 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA ++L+ M+++GV P+   ++ LI  +C  G ++ A  +   M+      NV TYN 
Sbjct: 341 MDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNE 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+ K ++ ++ L ++M+   + P VVTYNTL HGL E+  V+ A +LF  M    
Sbjct: 401 LICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDG 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  T+N F+  LC+ G + EA ++  +L+    +    AY+ LIDG CK GK+E A 
Sbjct: 461 FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAA 520

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +     +PN +T+N+MI G   +G++  A  L  DM    V P   T+N L+   
Sbjct: 521 SLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEV 580

Query: 241 IRNNETSKVVELLHRM 256
           ++  +  +  E+L+R+
Sbjct: 581 LKEYDFDRANEILNRL 596



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 119/244 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R NA  Y+ LI G C  G++  A E +  M  +GC   V TY  L+   C++    E+L+
Sbjct: 252 RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALS 311

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L+ EM  +G  P V TY  L   L +  +++ ALK+ +EM    VA     +N  I   C
Sbjct: 312 LFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYC 371

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + +A  +   +   K    +  Y+ LI G C+   ++ A  L   +    L P+VV
Sbjct: 372 KRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV 431

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TYN +IHG C  G +D A  LF  M   G +P+  TFN  M+   R     +  ++L  +
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491

Query: 257 DERN 260
            E++
Sbjct: 492 KEKH 495



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 121/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  +L LM  + V PN   Y+ LI GFC    +DRA  L   M  +    +VVTYNT
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+   V+ +  L+  M+  G  P   T+N     L  + +V  A ++ + ++   
Sbjct: 436 LIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKH 495

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A    Y   IDG CK G I  AA LF+ +   +C      ++ +IDGL K GK++ A 
Sbjct: 496 VKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAM 555

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L + + +  + P + TYNI++     +   D+A+++   + + G  PN VT+   +
Sbjct: 556 LLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFI 612



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 115/237 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D ASRL  LMI+ G  P+ + ++  +   C  G +  A ++  S+       N   Y  
Sbjct: 446 VDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTA 505

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK   +E + +L+  ML++   P  +T+N +  GL +  +V+ A+ L ++M   D
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  ++ + K      A E+   L     +  +  Y+  I   C  G+LE A 
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAE 625

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E+   +   G++ +   YN++I+ +   G +D A  +   M   G  P+ +T++ LM
Sbjct: 626 EMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILM 682



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 39/245 (15%)

Query: 49  NGCMHNVVTYNTLIN-----------------------------------GYCKTKDVEE 73
           N    N++T NT++N                                   GYC+  DVE 
Sbjct: 183 NSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVER 242

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +  ++  M     R   V+Y  L HGL E  ++  AL+ +  M+         TY   + 
Sbjct: 243 ACGVFCVM----PRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVC 298

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LC++G  +EA  LF  +R   CE  +  Y+ LID LCK G+++ A ++   +   G+ P
Sbjct: 299 ALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAP 358

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VV +N +I  +C  G M+ A  +   ME+K V PN  T+N L+ G  R     + + LL
Sbjct: 359 SVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALL 418

Query: 254 HRMDE 258
           ++M E
Sbjct: 419 NKMVE 423



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 66/321 (20%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++L+ + ++ V+ N   Y+ LIDG+C  G+I+ A  LF  M    C+ N +T+N +I
Sbjct: 483 EAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMI 542

Query: 63  NGYCKTKDVEESLNLYSEM-----------------------------------LSKGIR 87
           +G  K   V++++ L  +M                                   +S G +
Sbjct: 543 DGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ 602

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P VVTY           ++E A ++  ++++  V  ++  YN  I+     G +  A  +
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGV 662

Query: 148 FRTLRVLKCELGIEAYSCLI----------DGLCKIGKLETA-----------WE----- 181
            R +    CE     YS L+          +G   +G L+ +           W      
Sbjct: 663 LRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVG-LDVSLTNISVDNTDIWSKIDFG 721

Query: 182 ----LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               LF+ +   G +PN+ TY+ +I+G C  G+++ A  L+  M   G++P+ +  N+L+
Sbjct: 722 ITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLL 781

Query: 238 LGCIRNNETSKVVELLHRMDE 258
             C +     + V LL  M E
Sbjct: 782 SSCCKLGMFGEAVTLLDSMME 802



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 10/222 (4%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A+ +L+ +I  G +PN   Y+  I  +C  G ++ A E+ + +   G + +   YN L
Sbjct: 587 DRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLL 646

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF-HGLFEIHQVEHALKLFDEMQHSD 120
           IN Y     ++ +  +   M   G  P+ +TY+ L  H + E H+ E +  +  ++  ++
Sbjct: 647 INAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTN 706

Query: 121 VAAETSTYNTFID-GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++ + +   + ID G+           LF  +    C   +  YS LI+GLCK+G+L  A
Sbjct: 707 ISVDNTDIWSKIDFGI--------TTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVA 758

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           + L+  +   G+ P+ + +N ++   C  G   +A  L   M
Sbjct: 759 FSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM 800



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 74/164 (45%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M + G  PN   YS LI+G C  G ++ A  L+  M   G   + + +N+L++  C
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K     E++ L   M+       + +Y  L  GLFE    E A  +F  +       +  
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
            +   IDGL K GY+ + +EL   +    C L  E YS L+  L
Sbjct: 846 AWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 36/71 (50%)

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            + PN++T N M++ +C  G M  A   F+ +      P+  T+ +L+LG  RN++  + 
Sbjct: 184 SVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERA 243

Query: 250 VELLHRMDERN 260
             +   M  RN
Sbjct: 244 CGVFCVMPRRN 254


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 145/260 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  LL+ M   G  P+   Y+TL++GFC  G++  A++L   + +     NV+TY T
Sbjct: 33  ISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTT 92

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ YCK++ +E++L +Y EM  K + P VVTY  + +GL +  +VE A  +F EM+   
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     +Y T ID L K G + EA  L   + V      +  Y+ L+DGL K G    A 
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++FQ L    L+PN VTY+ +I G C  G ++K   L  +ME K + PN + +++++ G 
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272

Query: 241 IRNNETSKVVELLHRMDERN 260
            +    ++ ++++ +M +RN
Sbjct: 273 TKKGLLNEAMDVMRKMVQRN 292



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 135/257 (52%), Gaps = 3/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++   LL  M ++ + PN  VYS+++DG+   G ++ A ++   M     + NV  Y T
Sbjct: 243 VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGT 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K      +L+L+ EM S+G+       ++  + L    ++E A +LF +M    
Sbjct: 303 LIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRG 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y + +DG  K G   +A  + + +        + AY+ LI+GL K+GK E+  
Sbjct: 363 LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-- 420

Query: 181 ELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E F + + ++GL P+  T+N MI+ +C +G +  A  L  +M++ G+ PN +T N L+  
Sbjct: 421 ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQR 480

Query: 240 CIRNNETSKVVELLHRM 256
                E  K ++LL+ M
Sbjct: 481 LCAAGEIEKTMDLLNDM 497



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 126/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M  + + P+   Y+ +++G C +G+++ A+ +F  M+  G + N  +Y T
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K  +V E+  L   M+ +GI   VV Y  L  GLF+     +A  +F  +    
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  IDG CK G + +   L + +        +  YS ++DG  K G L  A 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + + +  ++PNV  Y  +I G+    Q   A DLF +M+++G+  N    ++ +   
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 241 IRNNETSKVVELLHRMDER 259
            R+    +  EL   M  R
Sbjct: 343 KRSGRMEEADELFKDMMSR 361



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 123/256 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL+ M   G++PN+   + L+   C  GEI++  +L   M + G      T+  +++
Sbjct: 455 ALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K++  +  L+++ +++  G++  + TYNTL      +  +  A  +F +M    + A
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  I G C + ++ +A  +   +        +E Y+ L+ GL     ++ A  L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL+PN  TY+I++ G    G M +   L+ +M  KG  P   T+N L+    + 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 244 NETSKVVELLHRMDER 259
            + S+  EL+  M  R
Sbjct: 695 KKMSQAKELMQEMQVR 710



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 123/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +   M + GV PN F Y+TLID     G +  A  L   M + G   +VV Y  
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K      + +++  +L + + P  VTY+ L  G  ++  V     L  EM+   
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y++ +DG  K G + EA ++ R +        +  Y  LIDG  K  +   A 
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   GL  N    +  ++     G+M++A +LF DM ++G+ P+ V + ++M G 
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  + S    +   M E++
Sbjct: 378 FKAGKESDAFNIAQEMTEKS 397



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 114/229 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M Q G+ P++  ++T+I+ +C  G +  A +L   M   G   N +T N L+   C   +
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E++++L ++ML  G  PT  T+  +     +  + +  L + D++    V  + STYNT
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I   C+ G I  A  +F+ +        I  Y+ LI G C    L+ A+ +   +   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + PNV TYNI++ G      + +A  L   M+ +G+ PN  T++ L+ G
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 35/243 (14%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            +V  +N LI+GYC+  ++  ++ L   M ++G  P +VTYNTL +G  +I  +  A KL
Sbjct: 15  RSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
             E+   ++     TY T ID  CK+  + +A  ++  + V      +  Y+C+++GLCK
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 173 IGKLETAWELFQSLPRVGLMPN-----------------------------------VVT 197
            GK+E A  +F+ +  VG++PN                                   VV 
Sbjct: 135 SGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVV 194

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  ++ G    G  + A D+F  +  + + PNCVT++ L+ G  +  + +K   LL  M+
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254

Query: 258 ERN 260
           E++
Sbjct: 255 EKH 257



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 2/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  L   M+ RG+ P+   Y++++DGF   G+   A  +   M       +VV YN 
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K    E S + ++ M   G+ P   T+NT+ +   +   + +ALKL +EM+   
Sbjct: 408 LINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   + T N  +  LC  G I +  +L   + V+        +  ++D   K  + +   
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            +   L  +G+  ++ TYN +I  FC  G + +A  +F DM  KG+  + +T+N L+ G 
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 240 CIRNN 244
           CI ++
Sbjct: 587 CISSH 591



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 73/142 (51%)

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           QH ++      +N  IDG C+NG I  A EL   ++       I  Y+ L++G CKIG L
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            TA +L   +  V L PNV+TY  +I  +C    ++ A  ++ +M  K + P+ VT+  +
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           M G  ++ +  +   +   M+E
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEE 150


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 146/270 (54%), Gaps = 15/270 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTYN 59
           D+A +L + M    V P+ F Y+T+I G C +G +++AREL   M   G     ++VTYN
Sbjct: 114 DQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYN 173

Query: 60  TLIN-GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           TLIN G CK  DVEE+L +   M   G  P V+TYN++ H L    +V  A ++   M  
Sbjct: 174 TLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC 233

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S    +  T+NT +DG CK G +  A E+   +        +  Y+ L++GLC++G+++ 
Sbjct: 234 S---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQV 290

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV---------APN 229
           A+ L + + R G +P+V+ Y  ++ G C  G++++AH L  +M A+ +          P 
Sbjct: 291 AFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPP 350

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             T+N ++ G I++   SK V L+  +  R
Sbjct: 351 LFTYNIVLGGLIKDGSISKAVSLISDLVAR 380



 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 154/263 (58%), Gaps = 9/263 (3%)

Query: 3   EASRLLDLMI---QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +A+R L+ +    +  V P+ ++++ LI G    G  D+A +LF +M+ +    ++ TYN
Sbjct: 77  QATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYN 136

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFH-GLFEIHQVEHALKLFDEM 116
           T+I+G CK+ ++E++  L  EM+ +G +  P +VTYNTL + G+ +   VE AL++ D M
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGM 196

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           + +  A +  TYN+ I  LC  G +VEAAE+ +T+    C   +  ++ L+DG CK G L
Sbjct: 197 KLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGML 253

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A E+ + + R  ++P+V+TY I+++G C  GQ+  A  L  ++  +G  P+ + + +L
Sbjct: 254 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 313

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G  ++ E  +  +L+  M  R
Sbjct: 314 VDGLCKSGEIEEAHKLVKEMSAR 336



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 142/273 (52%), Gaps = 16/273 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +LD M   G  P+   Y+++I   C+ G +  A E+  +M    C  ++VT+NT
Sbjct: 186 VEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNT 242

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   +  +L +  EM  + I P V+TY  L +GL  + QV+ A  L +E+    
Sbjct: 243 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 302

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCEL-------GIEAYSCLIDGLC 171
              +   Y + +DGLCK+G I EA +L + +  R +  E+        +  Y+ ++ GL 
Sbjct: 303 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLI 362

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G +  A  L   L   G +P+VVTYN +I G C   ++ +A DL  +M + G  PN V
Sbjct: 363 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDV 422

Query: 232 TFNTLMLGCIR----NNETSKVVELLHRMDERN 260
           T  +++ G  R    ++  S VVE+  +    N
Sbjct: 423 TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 455



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 12/263 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ +L  M      P+   ++TL+DGFC  G + RA E+   M     + +V+TY  L+
Sbjct: 223 EAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 279

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+   V+ +  L  E++ +G  P V+ Y +L  GL +  ++E A KL  EM   ++ 
Sbjct: 280 NGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREIL 339

Query: 123 AETS---------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           AE           TYN  + GL K+G I +A  L   L        +  Y+ LIDGLCK 
Sbjct: 340 AEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 399

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            ++  A +L   +  +G  PN VT   ++ G C  G++D A  L ++M  K  APN V +
Sbjct: 400 NRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVY 459

Query: 234 NTLMLGCIRNNETSKVVELLHRM 256
            +L+ G  +++       +L  M
Sbjct: 460 TSLIDGLCKSDRMDDACVVLDAM 482



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 130/251 (51%), Gaps = 6/251 (2%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q G + +   Y+ L+D    +G   R  +++  +  +GC  N+VT+  LI G CK     
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            +L     +    + P V  +N L HGLF+    + A+KLF+ M+ S V  +  TYNT I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139

Query: 133 DGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLID-GLCKIGKLETAWELFQSLPRV 189
            GLCK+G + +A EL   +  R  K    I  Y+ LI+ G+CK G +E A E+   +   
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLA 199

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+V+TYN +IH  C  G++ +A ++   M     +P+ VTFNTL+ G  +     + 
Sbjct: 200 GPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRA 256

Query: 250 VELLHRMDERN 260
           +E+L  M   N
Sbjct: 257 LEVLEEMCREN 267



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 9/268 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M +  + P+   Y+ L++G C  G++  A  L   +   G + +V+ Y +
Sbjct: 253 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 312

Query: 61  LINGYCKTKDVEESLNLY---------SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           L++G CK+ ++EE+  L          +EM+S  + P + TYN +  GL +   +  A+ 
Sbjct: 313 LVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 372

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           L  ++       +  TYNT IDGLCK   + EA +L   +  L C         ++ GLC
Sbjct: 373 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLC 432

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           ++G+++ AW L   + R    PNVV Y  +I G C   +MD A  +   M  +GVA +  
Sbjct: 433 RVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDF 492

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
            +  L++  I     ++ + +   M  R
Sbjct: 493 AYRKLIVSMIHGGRVAEAMAMYDEMVAR 520



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 9/247 (3%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV---------T 57
           LL+ ++++G  P+   Y++L+DG C +GEI+ A +L   M     +  +V         T
Sbjct: 294 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFT 353

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN ++ G  K   + ++++L S+++++G  P VVTYNTL  GL + ++V  A  L DEM 
Sbjct: 354 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                    T  + + GLC+ G + +A  L   +   +    +  Y+ LIDGLCK  +++
Sbjct: 414 SLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 473

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +  ++   G+  +   Y  +I    + G++ +A  ++ +M A+G  P+  T  TL 
Sbjct: 474 DACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLE 533

Query: 238 LGCIRNN 244
              + N+
Sbjct: 534 EAAMSNS 540



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 91/191 (47%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  M+   + P  F Y+ ++ G    G I +A  L   +   G + +VVTYNTLI+
Sbjct: 335 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 394

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   V E+ +L  EM S G  P  VT  ++  GL  + +V+ A  L  EM     A 
Sbjct: 395 GLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAP 454

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               Y + IDGLCK+  + +A  +   +R     L   AY  LI  +   G++  A  ++
Sbjct: 455 NVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMY 514

Query: 184 QSLPRVGLMPN 194
             +   G +P+
Sbjct: 515 DEMVARGFLPD 525



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 59/136 (43%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M   G  PN     +++ G C  G +D A  L V M       NVV Y +LI
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 463

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK+  ++++  +   M  +G+      Y  L   +    +V  A+ ++DEM      
Sbjct: 464 DGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFL 523

Query: 123 AETSTYNTFIDGLCKN 138
            + ST  T  +    N
Sbjct: 524 PDGSTSKTLEEAAMSN 539



 Score = 50.1 bits (118), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L+  M ++   PN  VY++LIDG C +  +D A  +  +M   G   +   Y  
Sbjct: 437 VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRK 496

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           LI        V E++ +Y EM+++G  P   T  TL
Sbjct: 497 LIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 133/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+++ M+  GV  +A V++T++ GFC  G++  AR  F  M   G   + VTY  
Sbjct: 336 VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+  +++E+  +  EM  KG+    VTY  L  G  ++ ++  A  + ++M    
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY    DGLCK G +  A EL   +     EL I  Y+ LI+GLCK G LE A 
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +   GL P+V TY  +I   C   ++D+AH L  +M  KG+ P  VT+N LM G 
Sbjct: 516 RTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575

Query: 241 IRNNETSKVVELLHRMDERN 260
             +        LL  M E+N
Sbjct: 576 CMSGRVEGGKRLLEWMLEKN 595



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 42/293 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L   + ++    N   Y+ L+   C  G I  A +LF  M       +VVTY  
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL-------- 112
           +++GYC   ++E ++ L SEM ++G+    V Y ++   L +  QV  A+++        
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 113 ---------------------------FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                                      FDEMQ   +AA+  TY   I+GLC+ G + EA 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            + + +     ++    Y+ LIDG CK+GK+  A+ +   + +  + PNVVTY  +  G 
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C  G +  A++L  +M +KG+  N  T+N+L+ G  +     + +  +  MDE
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + + M+Q+ V PN   Y+ L DG C  G++  A EL   M   G   N+ TYN+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  ++E+++    +M   G++P V TY T+   L +  +++ A  L  EM    
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  ++G C +G +     L   +           Y+ L+   C    +++  
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+++ +    ++PN  TYNI+I G C    M +A     +M  KG      ++N L+   
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 241 IRNNETSKVVELLHRM 256
            +  + ++   L  +M
Sbjct: 681 NKKKKFTEARRLFEKM 696



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 112/231 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ LL  M  +G+  N F Y++LI+G C  G +++A    + MD  G   +V TY T+I 
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C++K+++ + +L  EML KGI+PT+VTYN L +G     +VE   +L + M   ++  
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            T+TYN+ +   C    +    E+++ +   +       Y+ LI G CK   ++ A    
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
             +   G      +YN +I       +  +A  LF  M  + +      +N
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 91/196 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M+ +G++P    Y+ L++GFC++G ++  + L   M       N  TYN+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  YC  K+++ +  +Y  MLS+ + P   TYN L  G  +   ++ AL    EM    
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                S+YN  I  L K     EA  LF  +R  +     + Y+  ID       LE+  
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTL 725

Query: 181 ELFQSLPRVGLMPNVV 196
            L   L  V L+ ++ 
Sbjct: 726 ALCDELVEVTLVKSIA 741


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +  LM+++G+ P+   Y+ L+DGFC       A+ +F SM  +G   N  TY  
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K  ++EE+L +  EM+++G++  VVTYN +  G+ +  ++  A+ LF+EM  + 
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T TYN  IDG  K+  + +A EL   ++  K       YS LI GLC    L+ A 
Sbjct: 412 IEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + R G+ PNV  Y  +I  +  + + + A +L   M A GV P+   +N L++G 
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  +   LL  M E+
Sbjct: 532 CRAKKVEEAKMLLVDMGEK 550



 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA      M+++G+ P+   YS +I      G+   A  +F+     G + +V  YN+LI
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF--HGLFEIHQVEHALKLFDEMQHSD 120
           +G+CK  D+E++  LY EML  GI P +V YNTL   +G  +   +  A KLFDEM    
Sbjct: 669 SGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG 728

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   Y   IDG  K G + +A  LF   +  K    + A++ LID  CK GK+  A 
Sbjct: 729 ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ-KSVGSLSAFNSLIDSFCKHGKVIEAR 787

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +    L PN+VTY I+I  +     M++A  LFLDME + + PN +T+ +L+L  
Sbjct: 788 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 847

Query: 241 IRNNETSKVVELLHRMDER 259
            +     K++ L   M+ R
Sbjct: 848 NQIGNRFKMISLFKDMEAR 866



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 132/261 (50%), Gaps = 6/261 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL +MI  GV P+ F Y+ LI G C   +++ A+ L V M   G   N  TY   IN
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            Y K+ +++ +   + +MLS GI P  V Y  L  G  ++     AL  F  M    +  
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL--GIEAYSCLIDGLCKIGKLETAWE 181
           +   Y+  I  L KNG   EA  +F  L+ LK  +   +  Y+ LI G CK G +E A +
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 182 LFQSLPRVGLMPNVVTYNIMI--HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L+  +   G+ PN+V YN +I  +G+C  G + +A  LF +M +KG++P+   +  L+ G
Sbjct: 683 LYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 742

Query: 240 CIRNNETSKVVELLHRMDERN 260
           C +     K + L H   +++
Sbjct: 743 CGKEGNLEKALSLFHEAQQKS 763



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 120/245 (48%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +++  +PN F Y+  I G C TG +D A E+   M   G   +  TY  L++G+CK K  
Sbjct: 268 MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRS 327

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E+  ++  M S G+ P   TY  L  G  +   +E AL++ DEM    +     TYN  
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAM 387

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I G+ K G + +A  LF  + +   E     Y+ LIDG  K   +  A EL   +    L
Sbjct: 388 IGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            P+  TY+++I G C+   + KA+++   M   GV PN   + TL+   ++ +     +E
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 252 LLHRM 256
           LL  M
Sbjct: 508 LLKIM 512



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 36/296 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  M ++G++PNA  Y   I+ +  +GEI  A   F  M  +G + N V Y  
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C   +  E+L+ +  ML KG+ P +  Y+ + H L +  + + A+ +F +   + 
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID--GLCKIGKLET 178
           V  +   YN+ I G CK G I +A++L+  +        I  Y+ LI+  G CK G L  
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTE 716

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHG---------------------------------- 204
           A++LF  +   G+ P+   Y I+I G                                  
Sbjct: 717 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDS 776

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           FC  G++ +A +LF DM  K + PN VT+  L+    +     +  +L   M+ RN
Sbjct: 777 FCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 832



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 123/250 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  L + M+  G+ P+ + Y+ LIDG+  + ++ +A EL   M       +  TY+ 
Sbjct: 397 MAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C + D++++  +  +M+  G++P V  Y TL     +  + E A++L   M  + 
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   YN  I GLC+   + EA  L   +     +     Y   I+   K G+++ A 
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +   G++PN V Y I+I G C+ G   +A   F  M  KG+ P+   ++ ++   
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL 636

Query: 241 IRNNETSKVV 250
            +N +T + +
Sbjct: 637 SKNGKTKEAM 646



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 5/240 (2%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  V+   ID F + G ++ A  +F++    G    ++  N L+    K   +     +Y
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M+   I P V TY  +     ++  V     +  EM+  +      TYN FI GLC+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQT 289

Query: 139 GYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           G + EA E+ + +  ++  LG +   Y+ L+DG CK  + + A  +F+S+P  GL PN  
Sbjct: 290 GAVDEALEVKKLM--MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  +I GF  +G +++A  +  +M  +G+  N VT+N ++ G  +  E +K + L + M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 35/287 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDG------------------------------- 29
           + EA +L D MI +G+ P+ ++Y  LIDG                               
Sbjct: 714 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSL 773

Query: 30  ---FCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
              FC  G++  ARELF  M       N+VTY  LI+ Y K + +EE+  L+ +M ++ I
Sbjct: 774 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 833

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P  +TY +L     +I      + LF +M+   +A +   Y       CK G  +EA +
Sbjct: 834 IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 893

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L     V   +L  + +  LI  LCK  ++ T  EL   + +  L  +  T N ++ GF 
Sbjct: 894 LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 953

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
             G  D+A  +   M+  G  P  ++  T  +   R++  S + ++L
Sbjct: 954 KSGNEDEASKVLGVMQRLGWVPTSLSL-TDSISTGRDDMKSDISQVL 999



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 99/206 (48%), Gaps = 1/206 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N+  ++  I+ +     + E+ +++   +S+G  PT++  N L   L + + +    K++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M  + +  +  TY   I   CK G +++   +   +   +C+  +  Y+  I GLC+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQT 289

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G ++ A E+ + +   GL P+  TY +++ GFC   +  +A  +F  M + G+ PN  T+
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
             L+ G I+     + + +   M  R
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITR 375


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +LL  M  +G+ PN   Y+ +I+G C  G +     +   M+  G   + VTYNT
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK  +  ++L +++EML  G+ P+V+TY +L H + +   +  A++  D+M+   
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T +DG  + GY+ EA  + R +        +  Y+ LI+G C  GK+E A 
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   GL P+VV+Y+ ++ GFC    +D+A  +  +M  KG+ P+ +T+++L+ G 
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495

Query: 241 IRNNETSKVVELLHRM 256
                T +  +L   M
Sbjct: 496 CEQRRTKEACDLYEEM 511



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 139/253 (54%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A   LD M  RG+ PN   Y+TL+DGF   G ++ A  +   M+ NG   +VVTYN 
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C T  +E+++ +  +M  KG+ P VV+Y+T+  G    + V+ AL++  EM    
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T TY++ I G C+     EA +L+  +  +        Y+ LI+  C  G LE A 
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G++P+VVTY+++I+G     +  +A  L L +  +   P+ VT++TL+  C
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 241 IRNNETSKVVELL 253
             N E   VV L+
Sbjct: 601 -SNIEFKSVVSLI 612



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 138/250 (55%), Gaps = 8/250 (3%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ P+   Y++LI   C  G ++RA E    M + G   N  TY TL++G+ +   
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E+  +  EM   G  P+VVTYN L +G     ++E A+ + ++M+   ++ +  +Y+T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWELFQSL 186
            + G C++  + EA  + R +     E GI+     YS LI G C+  + + A +L++ +
Sbjct: 456 VLSGFCRSYDVDEALRVKREM----VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            RVGL P+  TY  +I+ +C +G ++KA  L  +M  KGV P+ VT++ L+ G  + + T
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571

Query: 247 SKVVELLHRM 256
            +   LL ++
Sbjct: 572 REAKRLLLKL 581



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE-IDRARELFVSMDINGCMHNVVTYN 59
           +D+A  ++ L    G  P    Y+ ++D    +   I  A  +F  M  +    NV TYN
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI G+C   +++ +L L+ +M +KG  P VVTYNTL  G  ++ +++   KL   M   
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     +YN  I+GLC+ G + E + +   +      L    Y+ LI G CK G    A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   + R GL P+V+TY  +IH  C  G M++A +    M  +G+ PN  T+ TL+ G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389

Query: 240 CIRNNETSKVVELLHRMDE 258
             +    ++   +L  M++
Sbjct: 390 FSQKGYMNEAYRVLREMND 408



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 15/252 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  +L+ M ++G+ P+   YST++ GFC + ++D A  +   M   G   + +TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+ +  +E+ +LY EML  G+ P   TY  L +       +E AL+L +EM    
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKCELGIEAYSC 165
           V  +  TY+  I+GL K     EA  L               + TL      +  ++   
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI G C  G +  A ++F+S+      P+   YNIMIHG C  G + KA+ L+ +M   G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670

Query: 226 VAPNCVTFNTLM 237
              + VT   L+
Sbjct: 671 FLLHTVTVIALV 682



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 124/239 (51%), Gaps = 1/239 (0%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK-DVEESLNLYSE 80
           V+  ++  +     ID+A  +      +G M  V++YN +++   ++K ++  + N++ E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           ML   + P V TYN L  G      ++ AL LFD+M+         TYNT IDG CK   
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           I +  +L R++ +   E  + +Y+ +I+GLC+ G+++    +   + R G   + VTYN 
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +I G+C +G   +A  +  +M   G+ P+ +T+ +L+    +    ++ +E L +M  R
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 120/228 (52%), Gaps = 15/228 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+   M+++G++P+   YS+LI GFC       A +L+  M   G   +  TY  
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA----LKLF-DE 115
           LIN YC   D+E++L L++EM+ KG+ P VVTY+ L +GL +  +   A    LKLF +E
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585

Query: 116 MQHSDVAAETSTYN----------TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
              SDV   T   N          + I G C  G + EA ++F ++     +    AY+ 
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           +I G C+ G +  A+ L++ + + G + + VT   ++     +G++++
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 54/247 (21%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + M++ G+ P+ F Y+ LI+ +C+ G++++A +L   M   G + +VVTY+ LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562

Query: 63  NG--------------------------------------------------YCKTKDVE 72
           NG                                                  +C    + 
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E+  ++  ML K  +P    YN + HG      +  A  L+ EM  S     T T    +
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682

Query: 133 DGLCKNGYIVEAAELFRTLRVLK-CELG-IEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
             L K G + E   +   + VL+ CEL   E    L++   + G ++   ++   + + G
Sbjct: 683 KALHKEGKVNELNSVI--VHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740

Query: 191 LMPNVVT 197
            +PN ++
Sbjct: 741 FLPNGIS 747


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 133/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+++ M+  GV  +A V++T++ GFC  G++  AR  F  M   G   + VTY  
Sbjct: 336 VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+  +++E+  +  EM  KG+    VTY  L  G  ++ ++  A  + ++M    
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY    DGLCK G +  A EL   +     EL I  Y+ LI+GLCK G LE A 
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +   GL P+V TY  +I   C   ++D+AH L  +M  KG+ P  VT+N LM G 
Sbjct: 516 RTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575

Query: 241 IRNNETSKVVELLHRMDERN 260
             +        LL  M E+N
Sbjct: 576 CMSGRVEGGKRLLEWMLEKN 595



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 42/293 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L   + ++    N   Y+ L+   C  G I  A +LF  M       +VVTY  
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL-------- 112
           +++GYC   ++E ++ L SEM ++G+    V Y ++   L +  QV  A+++        
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 113 ---------------------------FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                                      FDEMQ   +AA+  TY   I+GLC+ G + EA 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            + + +     ++    Y+ LIDG CK+GK+  A+ +   + +  + PNVVTY  +  G 
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C  G +  A++L  +M +KG+  N  T+N+L+ G  +     + +  +  MDE
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + + M+Q+ V PN   Y+ L DG C  G++  A EL   M   G   N+ TYN+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  ++E+++    +M   G++P V TY T+   L +  +++ A  L  EM    
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  ++G C +G +     L   +           Y+ L+   C    +++  
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+++ +    ++PN  TYNI+I G C    M +A     +M  KG      ++N L+   
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 241 IRNNETSKVVELLHRM 256
            +  + ++   L  +M
Sbjct: 681 NKKKKFTEARRLFEKM 696



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 112/231 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ LL  M  +G+  N F Y++LI+G C  G +++A    + MD  G   +V TY T+I 
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C++K+++ + +L  EML KGI+PT+VTYN L +G     +VE   +L + M   ++  
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            T+TYN+ +   C    +    E+++ +   +       Y+ LI G CK   ++ A    
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
             +   G      +YN +I       +  +A  LF  M  + +      +N
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 91/196 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M+ +G++P    Y+ L++GFC++G ++  + L   M       N  TYN+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  YC  K+++ +  +Y  MLS+ + P   TYN L  G  +   ++ AL    EM    
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                S+YN  I  L K     EA  LF  +R  +     + Y+  ID       LE+  
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTL 725

Query: 181 ELFQSLPRVGLMPNVV 196
            L   L  V L+ ++ 
Sbjct: 726 ALCDELVEVTLVKSIA 741


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 133/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+++ M+  GV  +A V++T++ GFC  G++  AR  F  M   G   + VTY  
Sbjct: 336 VSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+  +++E+  +  EM  KG+    VTY  L  G  ++ ++  A  + ++M    
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY    DGLCK G +  A EL   +     EL I  Y+ LI+GLCK G LE A 
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +   GL P+V TY  +I   C   ++D+AH L  +M  KG+ P  VT+N LM G 
Sbjct: 516 RTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575

Query: 241 IRNNETSKVVELLHRMDERN 260
             +        LL  M E+N
Sbjct: 576 CMSGRVEGGKRLLEWMLEKN 595



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 42/293 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L   + ++    N   Y+ L+   C  G I  A +LF  M       +VVTY  
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL-------- 112
           +++GYC   ++E ++ L SEM ++G+    V Y ++   L +  QV  A+++        
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 113 ---------------------------FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                                      FDEMQ   +AA+  TY   I+GLC+ G + EA 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            + + +     ++    Y+ LIDG CK+GK+  A+ +   + +  + PNVVTY  +  G 
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C  G +  A++L  +M +KG+  N  T+N+L+ G  +     + +  +  MDE
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + + M+Q+ V PN   Y+ L DG C  G++  A EL   M   G   N+ TYN+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  ++E+++    +M   G++P V TY T+   L +  +++ A  L  EM    
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  ++G C +G +     L   +           Y+ L+   C    +++  
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+++ +    ++PN  TYNI+I G C    M +A     +M  KG      ++N L+   
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 241 IRNNETSKVVELLHRM 256
            +  + ++   L  +M
Sbjct: 681 NKKKKFTEARRLFEKM 696



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 35/234 (14%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ LL  M  +G+  N F Y++LI+G C  G +++A    + MD  G   +V TY T+I 
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C++K+++ + +L  EML KGI+PT+VTYN L +G     +VE   +L + M   ++  
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTL----------------------RVLK------ 155
            T+TYN+ +   C    +    E+++ +                      R +K      
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 156 -------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
                    L   +Y+ LI  L K  K   A  LF+ + +  L      YN  I
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 91/196 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M+ +G++P    Y+ L++GFC++G ++  + L   M       N  TYN+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  YC  K+++ +  +Y  MLS+ + P   TYN L  G  +   ++ AL    EM    
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                S+YN  I  L K     EA  LF  +R  +     + Y+  ID       LE+  
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTL 725

Query: 181 ELFQSLPRVGLMPNVV 196
            L   L  V L+ ++ 
Sbjct: 726 ALCDELVEVTLVKSIA 741


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E+ +L + M+ +G++ +   Y+ L+   C +G ID A  L   M++ G   +++TY+ 
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSV 450

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   VEE++ LY EM SK I P     + +  GLFE   +  A   FD +  SD
Sbjct: 451 LIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD 510

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA E   YN  IDG  K G I EA   ++ +        I  ++ LI G CK GKL  A 
Sbjct: 511 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 570

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L  ++   GL+P  VTY  +++G+C +G M    D+  +MEAK + P  +T+  ++ G 
Sbjct: 571 KLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 630

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + V+LL  M  R
Sbjct: 631 CKEGRLHESVQLLKYMYAR 649



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 146/294 (49%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA    + M   GV P+   Y+ L +GF + G I  A ++   M +NG   ++VTY  
Sbjct: 321 MEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTI 380

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+  ++EES  L  +MLS+G++ ++VTY  L   L +  +++ A+ L  EM+   
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL----------------------------- 151
           +  +  TY+  I GLCK G + EA EL+  +                             
Sbjct: 441 LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQ 500

Query: 152 ----RVLKCELGIEA--YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                V K ++  E   Y+ +IDG  K+G +  A   ++ +   G+ P +VT+N +I+GF
Sbjct: 501 MYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGF 560

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G++ +A  L   ++  G+ P  VT+ TLM G     +   + ++LH M+ +
Sbjct: 561 CKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK 614



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 131/245 (53%), Gaps = 1/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L + M  + + PN+FV S +I G    G I  A+  F S+  +     ++ YN 
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 520

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY K  ++ E++  Y +++ KGI PT+VT+N+L +G  +  ++  A+KL D ++   
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG 580

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   + TY T ++G C+ G +    ++   +     +     Y+ ++ GLCK G+L  + 
Sbjct: 581 LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESV 640

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
           +L + +   GL P+ +TYN +I  FC    + KA  L   M    + P+ VT+N L+ G 
Sbjct: 641 QLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700

Query: 240 CIRNN 244
           C+  N
Sbjct: 701 CVYGN 705



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 124/231 (53%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   ++ L+ GFC  G +D A+  F  M   G + +V +YN L++G C    +EE+L  
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            ++M + G+ P +VTYN L +G   +  +  A K+   M  + +  +  TY   I G C+
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G I E+ +L   +     +L I  Y+ L+  LCK G+++ A  L   +  +GL P+++T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           Y+++IHG C  G +++A +L+ +M +K + PN    + ++ G       S+
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISE 498



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 123/242 (50%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  N +    LIDG C    +  A              +VV++N L++G+CK   V+ +
Sbjct: 230 GVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVA 289

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
            + +  M+  G+ P V +YN L HGL     +E AL+  ++M++  V  +  TYN   +G
Sbjct: 290 KSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANG 349

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
               G I  A ++ + + +      +  Y+ LI G C++G +E +++L + +   GL  +
Sbjct: 350 FRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLS 409

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +VTY +++   C  G++D+A  L  +ME  G+ P+ +T++ L+ G  +     + +EL  
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYE 469

Query: 255 RM 256
            M
Sbjct: 470 EM 471



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 120/256 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LLD +   G+ P +  Y+TL++G+C  G++    ++   M+        +TY  
Sbjct: 566 LAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV 625

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G CK   + ES+ L   M ++G+ P  +TYNT+     + H ++ A +L ++M    
Sbjct: 626 VVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHS 685

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I+GLC  G + +A  L  TL+     L   AY+ +I   C  G ++ A 
Sbjct: 686 LQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNAL 745

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +   G   ++  Y+ +I+  C    +  A   F  M   G+ P+      ++   
Sbjct: 746 VFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAF 805

Query: 241 IRNNETSKVVELLHRM 256
            R+ + + V E+   M
Sbjct: 806 HRSGDPNSVFEIFAMM 821



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 111/223 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R    +I++G+ P    +++LI GFC  G++  A +L  ++ ++G +   VTY TL+
Sbjct: 533 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLM 592

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC+  D+    ++  EM +K I+PT +TY  +  GL +  ++  +++L   M    + 
Sbjct: 593 NGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLF 652

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT I   CK   + +A +L   +     +     Y+ LI+GLC  G L+ A  L
Sbjct: 653 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL 712

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
             +L    +    V Y  +I   C  G +  A   F  M  +G
Sbjct: 713 LVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 755



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 104/222 (46%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M  + ++P    Y+ ++ G C  G +  + +L   M   G   + +TYNT+I  +C
Sbjct: 607 MLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC 666

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K  D++++  L+++ML   ++P+ VTYN L +GL     ++ A +L   +Q   +     
Sbjct: 667 KAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKV 726

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y T I   C  G +  A   F  +     E+ I  YS +I+ LCK   +  A   F  +
Sbjct: 727 AYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMM 786

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
              G+ P+     +M++ F   G  +   ++F  M   G+ P
Sbjct: 787 LTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 100/186 (53%), Gaps = 3/186 (1%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N V ++ L   Y + + V ++L + ++M    ++ ++ TYN+L   L+ +   +    ++
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSL---LYNLRHTDIMWDVY 223

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +E++ S V     T    IDGLC+   + +A    R     +    + +++ L+ G CK+
Sbjct: 224 NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G ++ A   F  + + GL+P+V +YNI++HG C  G M++A +   DME  GV P+ VT+
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 234 NTLMLG 239
           N L  G
Sbjct: 344 NILANG 349



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 108/221 (48%)

Query: 37  DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           D   +++  +  +G   N  T   LI+G C+   +++++    E   +   P+VV++N L
Sbjct: 217 DIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNAL 276

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
             G  ++  V+ A   F  M    +  +  +YN  + GLC  G + EA E    +     
Sbjct: 277 MSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGV 336

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           E  I  Y+ L +G   +G +  AW++ Q +   GL P++VTY I+I G C  G ++++  
Sbjct: 337 EPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFK 396

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           L   M ++G+  + VT+  L+    ++    + V LLH M+
Sbjct: 397 LKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 89/193 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E+ +LL  M  RG+ P+   Y+T+I  FC   ++ +A +L   M  +    + VTYN 
Sbjct: 636 LHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNV 695

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C   +++++  L   +  + IR T V Y T+         V++AL  F +M    
Sbjct: 696 LINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 755

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y+  I+ LCK   I +A   F  +         +    +++   + G   + +
Sbjct: 756 FEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVF 815

Query: 181 ELFQSLPRVGLMP 193
           E+F  + + GL+P
Sbjct: 816 EIFAMMIKCGLLP 828


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  160 bits (404), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 145/260 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  LL+ M   G  P+   Y+TL++GFC  G++  A++L   + +     NV+TY T
Sbjct: 33  ISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTT 92

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ YCK++ +E++L +Y EM  K + P VVTY  + +GL +  +VE A  +F EM+   
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     +Y T ID L K G + EA  L   + V      +  Y+ L+DGL K G    A 
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++FQ L    L+PN VTY+ +I G C  G ++K   L  +ME K + PN + +++++ G 
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272

Query: 241 IRNNETSKVVELLHRMDERN 260
            +    ++ ++++ +M +RN
Sbjct: 273 TKKGLLNEAMDVMRKMVQRN 292



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 135/257 (52%), Gaps = 3/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++   LL  M ++ + PN  VYS+++DG+   G ++ A ++   M     + NV  Y T
Sbjct: 243 VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGT 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K      +L+L+ EM S+G+       ++  + L    ++E A +LF +M    
Sbjct: 303 LIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRG 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y + +DG  K G   +A  + + +        + AY+ LI+GL K+GK E+  
Sbjct: 363 LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-- 420

Query: 181 ELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E F + + ++GL P+  T+N MI+ +C +G +  A  L  +M++ G+ PN +T N L+  
Sbjct: 421 ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQR 480

Query: 240 CIRNNETSKVVELLHRM 256
                E  K ++LL+ M
Sbjct: 481 LCAAGEIEKTMDLLNDM 497



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 126/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M  + + P+   Y+ +++G C +G+++ A+ +F  M+  G + N  +Y T
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K  +V E+  L   M+ +GI   VV Y  L  GLF+     +A  +F  +    
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  IDG CK G + +   L + +        +  YS ++DG  K G L  A 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + + +  ++PNV  Y  +I G+    Q   A DLF +M+++G+  N    ++ +   
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 241 IRNNETSKVVELLHRMDER 259
            R+    +  EL   M  R
Sbjct: 343 KRSGRMEEADELFKDMMSR 361



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 123/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +   M + GV PN F Y+TLID     G +  A  L   M + G   +VV Y  
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K      + +++  +L + + P  VTY+ L  G  ++  V     L  EM+   
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y++ +DG  K G + EA ++ R +        +  Y  LIDG  K  +   A 
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   GL  N    +  ++     G+M++A +LF DM ++G+ P+ V + ++M G 
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  + S    +   M E++
Sbjct: 378 FKAGKESDAFNIAQEMTEKS 397



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 35/287 (12%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-----CMHNVV-- 56
           A +LL+ M   G++PN+   + L+   C  GEI++  +L   M + G       H  V  
Sbjct: 455 ALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 57  ----------------------------TYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
                                       TYNTLI+ +C+   +  +  ++ +M+ KGI  
Sbjct: 515 ASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            ++TYN L HG      ++ A  +  +M    V+    TYN  + GL     I EAA L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             ++          Y  L+ G  KIG ++   +L+  +   G +P   TYN++I  F   
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
            +M +A +L  +M+ +G+ PN  T++ L+ G  + ++  ++ + L R
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKR 741



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 113/229 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M Q G+ P++  ++T+I+ +C  G +  A +L   M   G   N +T N L+   C   +
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E++++L ++ML  G  PT  T+  +     +  + +  L   D++    V  + STYNT
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNT 546

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I   C+ G I  A  +F+ +        I  Y+ LI G C    L+ A+ +   +   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + PNV TYNI++ G      + +A  L   M+ +G+ PN  T++ L+ G
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 35/243 (14%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            +V  +N LI+GYC+  ++  ++ L   M ++G  P +VTYNTL +G  +I  +  A KL
Sbjct: 15  RSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
             E+   ++     TY T ID  CK+  + +A  ++  + V      +  Y+C+++GLCK
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 173 IGKLETAWELFQSLPRVGLMPN-----------------------------------VVT 197
            GK+E A  +F+ +  VG++PN                                   VV 
Sbjct: 135 SGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVV 194

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  ++ G    G  + A D+F  +  + + PNCVT++ L+ G  +  + +K   LL  M+
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254

Query: 258 ERN 260
           E++
Sbjct: 255 EKH 257



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 2/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  L   M+ RG+ P+   Y++++DGF   G+   A  +   M       +VV YN 
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K    E S + ++ M   G+ P   T+NT+ +   +   + +ALKL +EM+   
Sbjct: 408 LINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   + T N  +  LC  G I +  +L   + V+        +  ++D   K  + +   
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
                L  +G+  ++ TYN +I  FC  G + +A  +F DM  KG+  + +T+N L+ G 
Sbjct: 527 HXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 240 CIRNN 244
           CI ++
Sbjct: 587 CISSH 591



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 73/142 (51%)

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           QH ++      +N  IDG C+NG I  A EL   ++       I  Y+ L++G CKIG L
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            TA +L   +  V L PNV+TY  +I  +C    ++ A  ++ +M  K + P+ VT+  +
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           M G  ++ +  +   +   M+E
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEE 150


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA---RELFVSMDI--------- 48
           ++EAS L+  M++ G+ PNA  Y+ LIDG+C  G++D+A   R+  +S  I         
Sbjct: 302 LEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNL 361

Query: 49  -----------------------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                   G M + VT+N LINGYC+  D + +  L  EM+ KG
Sbjct: 362 FIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKG 421

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I+PT+VTY +L + L + ++++ A  LF ++Q   +  +   +N  IDG C NG I  A 
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAF 481

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L + +  +K       Y+ L+ G C+ GK+E A +L   + R G+ P+ ++YN +I G+
Sbjct: 482 QLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGY 541

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              G M  A  +  +M   G  P  +T+N L+ G  +N E     ELL  M
Sbjct: 542 SKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEM 592



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 134/256 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +   M  +G+ P+ + Y++ I G C  G ++ A  L   M   G + N VTYN LI+
Sbjct: 270 ARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALID 329

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC   D++++     EM+SKGI  ++VTYN   H LF   ++  A  +  EM+   +  
Sbjct: 330 GYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP 389

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+N  I+G C+ G    A  L   +     +  +  Y+ LI  L K  +++ A  LF
Sbjct: 390 DAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALF 449

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + GL+P+++ +N +I G C +G +D+A  L  +M+   V P+ +T+NTLM G  R 
Sbjct: 450 SKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCRE 509

Query: 244 NETSKVVELLHRMDER 259
            +  +  +LL  M  R
Sbjct: 510 GKVEEARQLLDEMKRR 525



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 127/252 (50%), Gaps = 8/252 (3%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +  +R + + ++ +I+  C  G++ +A+E    M+  G   NVVTYNT+I+G+C    
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK 266

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            + +  ++  M  KG+ P   TYN+   GL +  ++E A  L  +M    +     TYN 
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNA 326

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWELFQSL 186
            IDG C  G + + A  +R   + K   GI A    Y+  I  L   G++  A  + + +
Sbjct: 327 LIDGYCNKGDL-DKAYAYRDEMISK---GIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+MP+ VT+NI+I+G+C  G   +A  L  +M  KG+ P  VT+ +L+    + N  
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 247 SKVVELLHRMDE 258
            +   L  ++ +
Sbjct: 443 KEADALFSKIQQ 454



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 4/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA     L+ ++G  PN    + ++  F        A  L+  M       ++ T+N +
Sbjct: 163 NEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIM 222

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   ++++      M + G++P VVTYNT+ HG     + + A  +F  M+   +
Sbjct: 223 INVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGL 282

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETA 179
             +  TYN+FI GLCK G + EA+ L    ++L+  L   A  Y+ LIDG C  G L+ A
Sbjct: 283 EPDCYTYNSFISGLCKEGRLEEASGLI--CKMLEGGLVPNAVTYNALIDGYCNKGDLDKA 340

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +     +   G+M ++VTYN+ IH    +G+M  A ++  +M  KG+ P+ VT N L+ G
Sbjct: 341 YAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILING 400

Query: 240 CIRNNETSKVVELLHRM 256
             R  +  +   LL  M
Sbjct: 401 YCRCGDAKRAFGLLDEM 417



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 117/240 (48%)

Query: 20  AFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYS 79
             ++  L+  +C   + + A E F  +   G + N+ T N +++ + K    + +  LY+
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 80  EMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
           EM    IR ++ T+N + + L +  +++ A +    M+   V     TYNT I G C  G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
               A  +F+T++    E     Y+  I GLCK G+LE A  L   +   GL+PN VTYN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +I G+CN G +DKA+    +M +KG+  + VT+N  +              ++  M E+
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 98/192 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LLD M+ +G++P    Y++LI        +  A  LF  +   G + +++ +N LI+G+C
Sbjct: 413 LLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHC 472

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
              +++ +  L  EM +  + P  +TYNTL  G     +VE A +L DEM+   +  +  
Sbjct: 473 ANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHI 532

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I G  K G + +A  +   +     +  I  Y+ LI GLCK  + E A EL + +
Sbjct: 533 SYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEM 592

Query: 187 PRVGLMPNVVTY 198
              G+ P+  TY
Sbjct: 593 VSKGITPDDSTY 604



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 79/135 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LL  M    V P+   Y+TL+ G+C  G+++ AR+L   M   G   + ++YNT
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K  D++++  +  EM++ G  PT++TYN L  GL +  + EHA +L  EM    
Sbjct: 537 LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596

Query: 121 VAAETSTYNTFIDGL 135
           +  + STY + I+ +
Sbjct: 597 ITPDDSTYLSIIEAM 611



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 61/107 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +LLD M +RG++P+   Y+TLI G+   G++  A  +   M   G    ++TYN 
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNA 571

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE 107
           LI G CK ++ E +  L  EM+SKGI P   TY ++   +  +  +E
Sbjct: 572 LIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 137/255 (53%), Gaps = 3/255 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+AS +   MI +  +P+AF ++ L+ G C + ++++AR+L   M   GC+ +   YN L
Sbjct: 24  DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNAL 83

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K KD  ++    +EM+     PTVVTY  +  GL +  +   A+KL DEM+    
Sbjct: 84  ISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGC 143

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    TYN  ++GLC+   + EA ++   + V      +  Y+  I GLCK  +++ A +
Sbjct: 144 SPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARK 203

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               +P   + P+VV+Y  +I+G C  G +D A  +   M  +G  P+ VT+++L+ G  
Sbjct: 204 FLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFC 260

Query: 242 RNNETSKVVELLHRM 256
           +  E  + + LL  M
Sbjct: 261 KGGEVERAMGLLDSM 275



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +LL  M + G  P+  +Y+ LI G+    +  +A +    M  N C+  VVTY  
Sbjct: 58  LEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTN 117

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK +   +++ L  EM  KG  P + TYN +  GL E  +++ A K+ +EM    
Sbjct: 118 IVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN+FI GLCK   + EA +    + V      + +Y+ +I+GLCK G L++A 
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP---DVVSYTTVINGLCKSGDLDSAS 234

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   G  P+VVTY+ +I GFC  G++++A  L   M   G  PN V +N+L+   
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294

Query: 241 IRNNETSKVVELLHRMDER 259
            R     K  ++L  M+ R
Sbjct: 295 HRLGHIGKAEDMLVEMERR 313



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 3/257 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A + L  M++    P    Y+ ++DG C       A +L   M   GC  N+ TYN ++
Sbjct: 95  QAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIV 154

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+ + ++E+  +  EM  +G  P VVTYN+   GL +  +V+ A K    M    V 
Sbjct: 155 EGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VT 211

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y T I+GLCK+G +  A+ +   +    C   +  YS LIDG CK G++E A  L
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 271

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+ ++G  PN+V YN ++      G + KA D+ ++ME +G  P+ V++N  + G  +
Sbjct: 272 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 331

Query: 243 NNETSKVVELLHRMDER 259
                K   +  RM ER
Sbjct: 332 AERVKKAKAVFDRMVER 348



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 135/270 (50%), Gaps = 16/270 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA + L  M    V P+   Y+T+I+G C +G++D A  +   M   GC  +VVTY++
Sbjct: 198 VDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSS 254

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  +VE ++ L   ML  G RP +V YN+L   L  +  +  A  +  EM+   
Sbjct: 255 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 314

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI----------DGL 170
              +  +YN  IDGLCK   + +A  +F  +    C     +YS LI          DGL
Sbjct: 315 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGL 374

Query: 171 CKIGKLETAWELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           CK G+ + A  LF   L      P+V  YN+M+   C   Q+DKA  +   M  K    N
Sbjct: 375 CKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-N 433

Query: 230 CVTFNTLMLG-CIRNNETSKVVELLHRMDE 258
            VT+N L+ G C+ +  +     LL  +DE
Sbjct: 434 VVTWNILVHGLCVDDRLSDAETMLLTMVDE 463



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 137/304 (45%), Gaps = 45/304 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D ASR+LD M  RG  P+   YS+LIDGFC  GE++RA  L  SM   GC  N+V YN+
Sbjct: 230 LDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 289

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+    +   + ++ ++  EM  +G  P VV+YN    GL +  +V+ A  +FD M    
Sbjct: 290 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 349

Query: 121 VAAETSTYNTFI----------DGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLID- 168
                S+Y+  I          DGLCK G   EA  LF + L    CE  +  Y+ ++D 
Sbjct: 350 CTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 409

Query: 169 ---------------------------------GLCKIGKLETAWELFQSLPRVGLMPNV 195
                                            GLC   +L  A  +  ++   G +P+ 
Sbjct: 410 HCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 469

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTY  ++   C  G+   A +LF +    G  P+ VT++ L+ G +  N   +   L  +
Sbjct: 470 VTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 529

Query: 256 MDER 259
           + ER
Sbjct: 530 LVER 533



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 101/207 (48%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G  HNV TYN L+    +    +++  ++ EM+ K  +P   T+  L  GL   +Q+E A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
            KL   M+      + + YN  I G  K     +A +    +    C   +  Y+ ++DG
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK  +   A +L   +   G  PN+ TYN+++ G C + ++D+A  +  +M  +G  P+
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            VT+N+ + G  + +   +  + L RM
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM 208



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 14/263 (5%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +L  M +RG  P+   Y+  IDG C    + +A+ +F  M   GC  N  +Y+ LI
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLI 361

Query: 63  ----------NGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALK 111
                     +G CK    +E+  L+S++L + I  P V  YN +     +  Q++ AL+
Sbjct: 362 VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQ 421

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           +  +M   +      T+N  + GLC +  + +A  +  T+           Y  L+D +C
Sbjct: 422 IHKQMLEKN-CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 480

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K GK   A ELF+   + G +P+VVTY+ +I G  ++   ++A+ LF  +  +   P+  
Sbjct: 481 KCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDK 540

Query: 232 TFNTL--MLGCIRNNETSKVVEL 252
           T   L   L  +     ++VV+L
Sbjct: 541 TLGLLHRKLKLLNKPRKAEVVDL 563



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G    V TYN L   L   H+ + A  +F EM       +  T+   + GLC++  + +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            +L   ++ + C      Y+ LI G  K      A++    + +   +P VVTY  ++ G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            C   +   A  L  +M  KG +PN  T+N ++ G     +  +  ++L  M  R
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR 176



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +L  M+  G  P+   Y TL+D  C  G+   A ELF      GC+ +VVTY+ 
Sbjct: 450 LSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSA 509

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           LI G       EE+  L+++++ +   P   T   L   L  +++   A
Sbjct: 510 LITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRKA 558



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G   NV TYN ++     + + DKA  +F +M  K   P+  TF  L+ G  R+N+  K
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 249 VVELLHRMDE 258
             +LL RM E
Sbjct: 61  ARKLLGRMKE 70


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 136/234 (58%), Gaps = 4/234 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   +++ A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V  ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLET 178
           +  +  TY T IDG CK G + E A  +R  R++K  + ++  AY+ LI GLC+ G+   
Sbjct: 307 LKPDKITYTTLIDGSCKEGDL-ETAXXYRK-RMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           A ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 126/234 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   +E++  L+ EML  G+ P  VT+ TL  G  +  +V  A++++ +M    ++ 
Sbjct: 215 GLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA    
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++   G   +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  ++E A +LF+EM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A      M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +   G+RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G++ 
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVX 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +         RM + N
Sbjct: 319 DGSCKEGDLETAXXYRKRMIKEN 341



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%)

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
             Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G 
Sbjct: 122 GFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            K G + E   L   ++    +  +  YS LI+GLCK  K+E A ELF+ +   GL+PN 
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNG 241

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VT+  +I G C +G++  A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  
Sbjct: 242 VTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 256 MDERN 260
           M  + 
Sbjct: 302 MSMKG 306



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 96/205 (46%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           + ++  ++ LI  Y ++  + +++  Y        R    T   +   L ++   +    
Sbjct: 63  ISDIYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
            ++E       A    +N  +    K G I  A  +F  +        + +++ L++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K+G L+  + L  ++   G+ P+V TY+++I+G C + +M+ A++LF +M   G+ PN V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGV 242

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           TF TL+ G  +N      +E+  +M
Sbjct: 243 TFTTLIDGHCKNGRVXLAMEIYKQM 267


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 140/255 (54%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA   L  M  +G+ PN   ++ +I+G C  G +    E+ V M   G + + VTYNTL
Sbjct: 35  DEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTL 94

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NGYCK  +  ++L L++EM+  G+ P VVTY +L + + +   +  A++ FD+M    +
Sbjct: 95  VNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGL 154

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY T I+G  + G + EA  +   +        I  Y+ LI+G C +G++E A  
Sbjct: 155 CPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIG 214

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L Q +   G++P+VV+Y+ +I GF  + ++D+A  + ++M  K V P+ VT+++L+ G  
Sbjct: 215 LLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLC 274

Query: 242 RNNETSKVVELLHRM 256
                ++  ++   M
Sbjct: 275 EQRRLTEACDMFQEM 289



 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 132/247 (53%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R    M + G  PN   Y+T+IDG+C     D A     SM + G   N++T+N +ING 
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C+   ++E+  +  EM  KG  P  VTYNTL +G  +      AL L  EM  + ++   
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY + I+ +CK G +  A E F  + V         Y+ +I+G  + G L+ A+ +   
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + R G +P++VTYN +I+G C  G+M++A  L  DM  KGV P+ V+++T++ G  RN E
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 246 TSKVVEL 252
             +  ++
Sbjct: 244 LDRAFQM 250



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 131/240 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A    D M  RG+ PN   Y+T+I+GF   G +D A  +   M  +G + ++VTYN 
Sbjct: 139 LNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNA 198

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C    +EE++ L  +M+ KG+ P VV+Y+T+  G     +++ A ++  EM    
Sbjct: 199 LINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKS 258

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY++ I GLC+   + EA ++F+ +  +K       Y+ LI+  CK G L  A 
Sbjct: 259 VLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKAL 318

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G +P+ VTYN++I+G     +  +A  L L +      P+ VT+NTL+  C
Sbjct: 319 HLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENC 378



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ PN   Y++LI+  C  G ++RA E F  M + G   N  TY T+ING+ +   
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGL 173

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E+  + +EM   G  P++VTYN L +G   + ++E A+ L  +M    V  +  +Y+T
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G  +N  +  A ++   +           YS LI GLC+  +L  A ++FQ +  + 
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I+ +C +G ++KA  L  +M  KG  P+ VT+N L+ G  +   + +  
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353

Query: 251 ELLHRM 256
            LL ++
Sbjct: 354 RLLLKL 359



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 15/247 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  LL  M+ +GV P+   YST+I GF    E+DRA ++ V M     + + VTY++
Sbjct: 209 MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSS 268

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+ + + E+ +++ EML+  + P   TY TL +   +   +  AL L DEM    
Sbjct: 269 LIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKCELGIEAYSC 165
              +  TYN  I+GL K     EA  L               + TL    C +  ++   
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+ G C  G ++ A ++F+S+      PN   YN++IHG C  G + KA+ L+ +M    
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448

Query: 226 VAPNCVT 232
             P+ VT
Sbjct: 449 FVPHTVT 455



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 118/236 (50%), Gaps = 15/236 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++   MI + V P+A  YS+LI G C    +  A ++F  M       +  TY T
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YCK  D+ ++L+L+ EM+ KG  P  VTYN L +GL +  + + A +L  ++ + D
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDD 363

Query: 121 VAAETSTYNTFID---------------GLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
                 TYNT I+               G C  G + EA ++F ++     +     Y+ 
Sbjct: 364 SIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNV 423

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           +I G C+IG +  A++L++ +  V  +P+ VT   ++     +G   + +++  D+
Sbjct: 424 IIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDI 479



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 88/183 (48%)

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
            L  + EM   G  P VVTYNT+  G  ++ + + A      M    +     T+N  I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLC++G + E +E+   +           Y+ L++G CK G    A  L   + R GL P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NVVTY  +I+  C  G +++A + F  M  +G+ PN  T+ T++ G  +     +   +L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 254 HRM 256
           + M
Sbjct: 182 NEM 184



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 81/151 (53%)

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
            L+ F EM+ +       TYNT IDG CK     EA    R++ +   E  +  ++ +I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC+ G+L+   E+   + R G +P+ VTYN +++G+C +G   +A  L  +M   G++P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           N VT+ +L+    +    ++ +E   +M  R
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVR 152



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 23/216 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L D MIQ+G  P+A  Y+ LI+G         AR L + +  +  + + VTYNT
Sbjct: 314 LNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNT 373

Query: 61  LI---------------NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           LI                G+C    ++E+  ++  M++K  +P    YN + HG   I  
Sbjct: 374 LIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGN 433

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE----LFRTLRVLKCELGIE 161
           V  A KL+ EM H D    T T    +  L   G   E  E    + R+ ++   EL   
Sbjct: 434 VLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELS-- 491

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
               L++   K G ++  + L   + + GL+P+  T
Sbjct: 492 --KVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 143/257 (55%), Gaps = 3/257 (1%)

Query: 3   EASRLLDL---MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           E  R LDL   M +RG  P+   ++ LI+G    GE+ +A+ L   M   G   +  TYN
Sbjct: 252 EVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYN 311

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI GYCK   + E+L L+ EM+++G+ PTV ++NT+ +G  +  ++  A +   +M   
Sbjct: 312 PLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKK 371

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++  +  +YNT I G C+ G I EA  L   LR       I  Y+ LIDGLC++G LETA
Sbjct: 372 NLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETA 431

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L + +   G+ P+VVTY ++++G C  G M  A + F +M   G+AP+   +   ++G
Sbjct: 432 LKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVG 491

Query: 240 CIRNNETSKVVELLHRM 256
            ++  +T+K  +L   M
Sbjct: 492 ELKLGDTAKAFKLQEEM 508



 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 143/294 (48%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A + L  M+++ + P+   Y+TLI GFC  G I  A  L   +       N+VTYNT
Sbjct: 358 MSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNT 417

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+  D+E +L L  +M+++GI P VVTY  L +G  ++  +  A + FDEM H  
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +   Y   I G  K G   +A +L   +        +  Y+  ++GLCK+G LE A 
Sbjct: 478 LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAG 537

Query: 181 ELFQSLPRVGLMPN-----------------------------------VVTYNIMIHGF 205
           EL Q + R G +P+                                   VVTY ++IH  
Sbjct: 538 ELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAH 597

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +G++D A   FL+M+ KGV PN +T+N L+ G  +  +  +  +    M E+
Sbjct: 598 ALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEK 651



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+  M + G+R + + Y+ LI G+C  G +  A  L+  M   G    V ++NT
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G+CK   + ++    S+ML K + P +++YNTL +G   +  +  A  L DE++  +
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TYNT IDGLC+ G +  A +L   +        +  Y+ L++G CK+G +  A 
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E F  +  VGL P+   Y   I G    G   KA  L  +M  KG  P+ +T+N  + G 
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527

Query: 241 IRNNETSKVVELLHRM 256
            +     +  ELL +M
Sbjct: 528 CKLGNLEEAGELLQKM 543



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 121/222 (54%)

Query: 38  RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF 97
           +A E++  M   G    V TYNT+++ +CK  +V+ +L+L  +M  +G  P+ VT+N L 
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 98  HGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +GL +  +++ A  L  EM  + +     TYN  I G CK G +VEA  L+  +      
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             + +++ ++ G CK GK+  A +    + +  LMP++++YN +I+GFC  G + +A  L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             ++  + ++ N VT+NTL+ G  R  +    ++L   M  R
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINR 441



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 108/234 (46%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    D M+  G+ P+ F Y+  I G    G+  +A +L   M   G   +V+TYN  +N
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVN 525

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK  ++EE+  L  +M+  G  P  VTY +  H   E   +    ++F +M       
Sbjct: 526 GLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   I     NG +  A   F  ++       +  Y+ LI+G CK+ K++ A + F
Sbjct: 586 TVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFF 645

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   G+ PN  TY I+I+  CN G+  +A  L+  M  K + P+  T   L+
Sbjct: 646 IEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALL 699



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 97/188 (51%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           ++L +Y  M   GIRPTV TYNT+ H   +  +V+ AL L  +MQ         T+N  I
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           +GL K G + +A  L + +      +    Y+ LI G CK G L  A  L++ +   G+ 
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P V ++N +++GFC +G+M  A     DM  K + P+ +++NTL+ G  R     +   L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399

Query: 253 LHRMDERN 260
           L  +  RN
Sbjct: 400 LDELRFRN 407



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 15/255 (5%)

Query: 10  LMIQRGVRPNAFVY----STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++ Q G + + + +      L+D  CL        E  +S ++ G +      + LI GY
Sbjct: 129 VLTQPGFKTSEYAFCAILQILVDN-CLMKSAYWVMERIISFEMYGIV------DVLIGGY 181

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
                  + L ++ +M+     P V   N +   L + + +  AL+++  M    +    
Sbjct: 182 LNY----QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTV 237

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
           +TYNT +   CK G +  A +L   ++   C      ++ LI+GL K G+L+ A  L Q 
Sbjct: 238 TTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQE 297

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + + GL  +  TYN +I G+C  G + +A  L+ +M  +GV+P   + NT+M G  +  +
Sbjct: 298 MAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGK 357

Query: 246 TSKVVELLHRMDERN 260
            S   + L  M ++N
Sbjct: 358 MSDARQQLSDMLKKN 372



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 1/141 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG  P    Y+ LI    L G +D A   F+ M   G + NV+TYN LING+CK + 
Sbjct: 578 MLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRK 637

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++   + EM  KGI P   TY  L +    + + + AL+L+ +M    +  ++ T+  
Sbjct: 638 MDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGA 697

Query: 131 FIDGLCKNGYIVEAAELFRTL 151
            +  L K+ Y V+A +   +L
Sbjct: 698 LLKKLDKD-YKVQAVQFIESL 717



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  MI+ G  P+   Y++ +      G +   RE+F  M   G    VVTY  
Sbjct: 533 LEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTV 592

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +     ++ ++  + EM  KG+ P V+TYN L +G  ++ +++ A K F EMQ   
Sbjct: 593 LIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKG 652

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF 148
           +     TY   I+  C  G   EA  L+
Sbjct: 653 IFPNKYTYTILINENCNMGKWQEALRLY 680


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 145/260 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  LL+ M   G  P+   Y+TL++GFC  G++  A++L   + +     NV+TY T
Sbjct: 33  ISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTT 92

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ YCK++ +E++L +Y EM  K + P VVTY  + +GL +  +VE A  +F EM+   
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     +Y T ID L K G + EA  L   + V      +  Y+ L+DGL K G    A 
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++FQ L    L+PN VTY+ +I G C  G ++K   L  +ME K + PN + +++++ G 
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272

Query: 241 IRNNETSKVVELLHRMDERN 260
            +    ++ ++++ +M +RN
Sbjct: 273 TKKGLLNEAMDVMRKMVQRN 292



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 135/257 (52%), Gaps = 3/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++   LL  M ++ + PN  VYS+++DG+   G ++ A ++   M     + NV  Y T
Sbjct: 243 VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGT 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K      +L+L+ EM S+G+       ++  + L    ++E A +LF +M    
Sbjct: 303 LIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRG 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y + +DG  K G   +A  + + +        + AY+ LI+GL K+GK E+  
Sbjct: 363 LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES-- 420

Query: 181 ELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E F + + ++GL P+  T+N MI+ +C +G +  A  L  +M++ G+ PN +T N L+  
Sbjct: 421 ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQR 480

Query: 240 CIRNNETSKVVELLHRM 256
                E  K ++LL+ M
Sbjct: 481 LCAAGEIEKTMDLLNDM 497



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 126/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M  + + P+   Y+ +++G C +G+++ A+ +F  M+  G + N  +Y T
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K  +V E+  L   M+ +GI   VV Y  L  GLF+     +A  +F  +    
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  IDG CK G + +   L + +        +  YS ++DG  K G L  A 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + + +  ++PNV  Y  +I G+    Q   A DLF +M+++G+  N    ++ +   
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 241 IRNNETSKVVELLHRMDER 259
            R+    +  EL   M  R
Sbjct: 343 KRSGRMEEADELFKDMMSR 361



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 123/256 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL+ M   G++PN+   + L+   C  GEI++  +L   M + G      T+  +++
Sbjct: 455 ALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K++  +  L+++ +++  G++  + TYNTL      +  +  A  +F +M    + A
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  I G C + ++ +A  +   +        +E Y+ L+ GL     ++ A  L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL+PN  TY+I++ G    G M +   L+ +M  KG  P   T+N L+    + 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 244 NETSKVVELLHRMDER 259
            + S+  EL+  M  R
Sbjct: 695 KKMSQAKELMQEMQVR 710



 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 123/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +   M + GV PN F Y+TLID     G +  A  L   M + G   +VV Y  
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K      + +++  +L + + P  VTY+ L  G  ++  V     L  EM+   
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y++ +DG  K G + EA ++ R +        +  Y  LIDG  K  +   A 
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   GL  N    +  ++     G+M++A +LF DM ++G+ P+ V + ++M G 
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  + S    +   M E++
Sbjct: 378 FKAGKESDAFNIAQEMTEKS 397



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 114/229 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M Q G+ P++  ++T+I+ +C  G +  A +L   M   G   N +T N L+   C   +
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E++++L ++ML  G  PT  T+  +     +  + +  L + D++    V  + STYNT
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I   C+ G I  A  +F+ +        I  Y+ LI G C    L+ A+ +   +   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + PNV TYNI++ G      + +A  L   M+ +G+ PN  T++ L+ G
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 35/243 (14%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            +V  +N LI+GYC+  ++  ++ L   M ++G  P +VTYNTL +G  +I  +  A KL
Sbjct: 15  RSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
             E+   ++     TY T ID  CK+  + +A  ++  + V      +  Y+C+++GLCK
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 173 IGKLETAWELFQSLPRVGLMPN-----------------------------------VVT 197
            GK+E A  +F+ +  VG++PN                                   VV 
Sbjct: 135 SGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVV 194

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  ++ G    G  + A D+F  +  + + PNCVT++ L+ G  +  + +K   LL  M+
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEME 254

Query: 258 ERN 260
           E++
Sbjct: 255 EKH 257



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 2/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  L   M+ RG+ P+   Y++++DGF   G+   A  +   M       +VV YN 
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K    E S + ++ M   G+ P   T+NT+ +   +   + +ALKL +EM+   
Sbjct: 408 LINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   + T N  +  LC  G I +  +L   + V+        +  ++D   K  + +   
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            +   L  +G+  ++ TYN +I  FC  G + +A  +F DM  KG+  + +T+N L+ G 
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 240 CIRNN 244
           CI ++
Sbjct: 587 CISSH 591



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 73/142 (51%)

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           QH ++      +N  IDG C+NG I  A EL   ++       I  Y+ L++G CKIG L
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            TA +L   +  V L PNV+TY  +I  +C    ++ A  ++ +M  K + P+ VT+  +
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           M G  ++ +  +   +   M+E
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEE 150


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 144/311 (46%), Gaps = 52/311 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +L   M + G+ P+ + Y+TL+D FC  G I++AR  F  M  +GC  NVVTY  
Sbjct: 138 VEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTA 197

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y KT+ +  +  ++  MLS G  P +VTY  L  G  +  + E A +++  M++  
Sbjct: 198 LIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDK 257

Query: 121 V-----------------AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           V                      TY   +DGLCK   + EA +L  T+ +  CE     Y
Sbjct: 258 VDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIY 317

Query: 164 SCLIDGLCKIGKLETAWELFQSL------PRV---------------------------- 189
             LIDG CK+GKL+ A E+F  +      P V                            
Sbjct: 318 DALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLE 377

Query: 190 -GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
               PNVV Y  M+ G C  G+ D+A+ L L ME KG  PN VT+  ++ G  +     +
Sbjct: 378 NSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDR 437

Query: 249 VVELLHRMDER 259
            +ELL  M  +
Sbjct: 438 CLELLQLMTSK 448



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 140/310 (45%), Gaps = 52/310 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    D M Q G  PN   Y+ LI  +  T ++ RA E+F  M  NGC+ N+VTY  
Sbjct: 173 IEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTA 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-----------------RPTVVTYNTLFHGLFEI 103
           LI+G+CK  + E++  +Y+ M +  +                  P VVTY  L  GL + 
Sbjct: 233 LIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKA 292

Query: 104 HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR-------------- 149
           H+V+ A  L + M           Y+  IDG CK G + EA E+F               
Sbjct: 293 HKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTY 352

Query: 150 ---------------TLRVL------KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
                           L+VL       C   +  Y+ ++DGLCK+GK + A+ L   +  
Sbjct: 353 SSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE 412

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  PNVVTY  MI GF   G++D+  +L   M +KG APN +T+  L+  C        
Sbjct: 413 KGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDD 472

Query: 249 VVELLHRMDE 258
             +LL  M +
Sbjct: 473 AHKLLEEMKQ 482



 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 143/276 (51%), Gaps = 17/276 (6%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  ++  M+ +G  P++  YS +I   C   ++++A +LF  M  NG   +V TY TL
Sbjct: 104 EKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTL 163

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK   +E++ N + EM   G  P VVTY  L H   +  ++  A ++F+ M  +  
Sbjct: 164 LDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGC 223

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL--------------RVLKCEL---GIEAYS 164
                TY   IDG CK G   +A +++  +              R++  EL    +  Y 
Sbjct: 224 VPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYG 283

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            L+DGLCK  K++ A +L +++   G  PN + Y+ +I GFC  G++D+A ++F  M   
Sbjct: 284 ALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGH 343

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G +PN  T+++L+    ++      +++L +M E +
Sbjct: 344 GCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENS 379



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 6/253 (2%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           +MI  G  P+  ++++L+  +C +G+   A +L   M I G     V YN LI G C T+
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 70  DVE--ESLNL----YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           D+   E + L    Y+EML  G+    V        L  I + E A  +  EM       
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           ++STY+  I  LC    + +A +LF+ ++       +  Y+ L+D  CK+G +E A   F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + G  PNVVTY  +IH +    ++ +A+++F  M + G  PN VT+  L+ G  + 
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 244 NETSKVVELLHRM 256
            ET K  ++  RM
Sbjct: 241 GETEKACQIYARM 253



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 2/252 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL+ M   G  PN  +Y  LIDGFC  G++D A+E+F  M  +GC  NV TY++
Sbjct: 295 VKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSS 354

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K K ++ +L + ++ML     P VV Y  +  GL ++ + + A +L   M+   
Sbjct: 355 LIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKG 414

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   IDG  K G +    EL + +    C      Y  LI+  C  G L+ A 
Sbjct: 415 CYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAH 474

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + + +     ++  Y  +I GF +  +   +  L  ++   G  P    +  L+   
Sbjct: 475 KLLEEMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNF 532

Query: 241 IRNNETSKVVEL 252
           I+       +EL
Sbjct: 533 IKAGRLEMALEL 544



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 115/285 (40%), Gaps = 34/285 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +   M+  G  PN + YS+LID       +D A ++   M  N C  NVV Y  
Sbjct: 330 LDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTE 389

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK    +E+  L   M  KG  P VVTY  +  G  +  +V+  L+L   M    
Sbjct: 390 MVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKG 449

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV--------------------------L 154
            A    TY   I+  C  G + +A +L   ++                           L
Sbjct: 450 CAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGL 509

Query: 155 KCELG-------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
             EL        +  Y  LID   K G+LE A EL + L          TY  +I     
Sbjct: 510 LAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTL 568

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
             ++DKA  L+ DM  +G  P       L+ G +R  +  + ++L
Sbjct: 569 ACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 99/220 (45%), Gaps = 38/220 (17%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA RL+ +M ++G  PN   Y+ +IDGF   G +DR  EL   M   GC  N +TY  L
Sbjct: 401 DEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVL 460

Query: 62  INGYCKT-------KDVEE--------------------------SLNLYSEMLSKGIRP 88
           IN  C         K +EE                          SL L +E+   G  P
Sbjct: 461 INHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVP 520

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            +  Y  L     +  ++E AL+L +E+  S  AA  +TY + I+ L     + +A +L+
Sbjct: 521 ILPVYKLLIDNFIKAGRLEMALELHEELS-SFSAAYQNTYVSLIESLTLACKVDKAFKLY 579

Query: 149 R--TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
              T R    EL +    CLI GL ++GK E A +L  S+
Sbjct: 580 SDMTRRGFVPELSM--LVCLIKGLLRVGKWEEALQLSDSI 617



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD-INGCMHNVVTYNTLINGY 65
           LL  + + G  P   VY  LID F   G ++ A EL   +   +    N  TY +LI   
Sbjct: 509 LLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN--TYVSLIESL 566

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
                V+++  LYS+M  +G  P +     L  GL  + + E AL+L D +   D+
Sbjct: 567 TLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDI 622


>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 376

 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ +L++ ++M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L     + G+  YS L+ GLC   ++E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 125/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  136 bits (343), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +      PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  159 bits (403), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 149/262 (56%), Gaps = 3/262 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E+ ++L+ M+  G  P+ F ++ ++ GF  +  +++ARE++  M  +G   + V+Y+ L
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 62  INGYCKTKDVEESLNLYSEML--SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           I+G  K   ++ESL + SEM   + G  P V+T++TL HGL    ++E AL++F  M  +
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TY T I GLC+   +++A ELF  +          AY+ LI G CK G ++ A
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312

Query: 180 WELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            +L++ +    GL P +VT+N +I GFC  G++ +A++L  +M  KG+A +  T+  L+ 
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIA 372

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G  R  +  + +E+  +M E+ 
Sbjct: 373 GLSRATKLDEALEVYKQMREKK 394



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 141/260 (54%), Gaps = 3/260 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  M  + +  N F YS++I       + + + ++   M   GC  +V  +N ++ 
Sbjct: 100 ARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQ 159

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE--MQHSDV 121
           G+ ++ ++E++  +Y  M+  G +P  V+Y+ L HGL +I +++ +LK+  E  M+ +  
Sbjct: 160 GFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGY 219

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T++T I GLC+ G + +A E+F ++    C+     Y+ LI GLC+  K+  A E
Sbjct: 220 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARE 279

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME-AKGVAPNCVTFNTLMLGC 240
           LF+ + +  + P+ V YN +I G+C  G MD+A  L+ +M    G+ P  VTFNTL+ G 
Sbjct: 280 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 339

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  +  +  EL+  M  + 
Sbjct: 340 CKLGKLGRANELVAEMGTKG 359



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 133/239 (55%), Gaps = 6/239 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTY 58
           M++A  +   M++ G +P+   Y  LI G    G++D + ++   ++M   G + NV+T+
Sbjct: 167 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITF 226

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           +TLI+G C+T ++E++L ++  ML  G +P   TY TL  GL    +V  A +LF++M  
Sbjct: 227 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ 286

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-VLKCELGIEAYSCLIDGLCKIGKLE 177
           + +  +   YN+ I G CK G + EA +L+R +      +  I  ++ LIDG CK+GKL 
Sbjct: 287 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 346

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAP-NCVTF 233
            A EL   +   GL  +  TY I+I G     ++D+A +++  M  K   + P +CV+F
Sbjct: 347 RANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 405



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 126/227 (55%), Gaps = 1/227 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +   M++ G +PN + Y+TLI G C   ++ +ARELF  M       + V YN+
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298

Query: 61  LINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI GYCK   ++E+  LY EM    G++PT+VT+NTL  G  ++ ++  A +L  EM   
Sbjct: 299 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +AA+T TY   I GL +   + EA E+++ +R  K  L   +    + GLCK G ++ A
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 418

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           + +F++  + G +PN  T+ I+       G+++ A  L    +A+ +
Sbjct: 419 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 3/240 (1%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
            Y  ++      G + +A E+F +M    C+ ++VTYN LIN  C   +  ++L+L+  M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 82  -LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
              K + P   TYNTL  GL      E A KL  EM+  ++AA   TY++ I  L K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
             E+ ++   +    C   + A++ ++ G  +   +E A E++Q +   G  P+ V+Y+I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 201 MIHGFCNDGQMDKAHDLF--LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +IHG    G++D++  +   + M A G  PN +TF+TL+ G  R  E  K +E+   M E
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 135/261 (51%), Gaps = 3/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           + +A  + + M      P+   Y+ LI+  C  GE  +A +LF SM     +  +  TYN
Sbjct: 26  LAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYN 85

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TLI+G C + + E +  L SEM  K I   V TY+++   L +  + E + K+ +EM  +
Sbjct: 86  TLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAA 145

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +   +N  + G  ++  + +A E+++ +     +    +Y  LI GL KIGKL+ +
Sbjct: 146 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 205

Query: 180 WELFQ--SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            ++    ++   G +PNV+T++ +IHG C  G+++KA ++F  M   G  PN  T+ TL+
Sbjct: 206 LKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 265

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G  R  +  +  EL  +M +
Sbjct: 266 AGLCRAEKVIQARELFEKMTQ 286



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 1/107 (0%)

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           KC +G +AY  ++  L K G L  A E+F+++     +P++VTYN++I+  CN G+  KA
Sbjct: 5   KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKA 64

Query: 215 HDLFLDME-AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            DLF  M+  K V P+  T+NTL+ G   +  T    +LL  M ++N
Sbjct: 65  LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKN 111



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 1/142 (0%)

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M  +  A     Y+  +  L K G + +A E+F T++   C   +  Y+ LI+  C  G+
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 176 LETAWELFQSLPRVGLM-PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
              A +LFQS+ R   + P+  TYN +I G C+ G  + A  L  +M  K +A N  T++
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
           +++   ++  +  +  ++L  M
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEM 142


>gi|413951888|gb|AFW84537.1| hypothetical protein ZEAMMB73_783984 [Zea mays]
          Length = 238

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 138/232 (59%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G +PN+ VY+ LI+GFC   +I  A ++++ M  NGC   ++TYNTLI+G CK + 
Sbjct: 1   MMKDGCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEK 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +E+ +L  EML +G +P + TY +L  GL  + +++ AL +++E+  + +  +   +N 
Sbjct: 61  YQEASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNI 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I GLC  G + +A  ++  ++   C   +  Y+ L+DG  +IG ++TA  L+ ++   G
Sbjct: 121 LIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNG 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           L P++VTYN  I G C+  +  +   L  ++ A G+ P+ +T++ L+   IR
Sbjct: 181 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVITWSILVRAVIR 232



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 109/208 (52%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           +GC  N   YN LING+C+   + +++ +Y EM   G  PT++TYNTL  GL +  + + 
Sbjct: 4   DGCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEKYQE 63

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A  L  EM       +  TY + I GLC+   I  A  ++  +     ++ +  ++ LI 
Sbjct: 64  ASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILIH 123

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC  GK+  A+ ++  +      PN+VTYN ++ GF   G +D A  L+  +   G+ P
Sbjct: 124 GLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLKP 183

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + VT+NT + G    N T + V LL+ +
Sbjct: 184 DIVTYNTRIKGLCSCNRTPEGVLLLNEV 211



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 104/211 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++   M   G  P    Y+TLIDG C   +   A  L   M   G   ++ TY +
Sbjct: 26  ISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYGS 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+ K ++ +L +++E+L  GI+  V+ +N L HGL    +V  A  ++ EM+  +
Sbjct: 86  LIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILIHGLCSAGKVNDAFCIYLEMKEKN 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT +DG  + G I  AA L+  +     +  I  Y+  I GLC   +     
Sbjct: 146 CSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLKPDIVTYNTRIKGLCSCNRTPEGV 205

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
            L   +   G+MP+V+T++I++      G +
Sbjct: 206 LLLNEVLATGIMPSVITWSILVRAVIRYGPI 236



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EAS L   M++RG +P+   Y +LI G C   +ID A  ++  +   G   +V+ +N LI
Sbjct: 63  EASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILI 122

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C    V ++  +Y EM  K   P +VTYNTL  G +EI  ++ A  L+  +  + + 
Sbjct: 123 HGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLK 182

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            +  TYNT I GLC      E   L   +        +  +S L+  + + G ++
Sbjct: 183 PDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVITWSILVRAVIRYGPIQ 237



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%)

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  PN   YN +I+GFC   ++  A  ++++M   G  P  +T+NTL+ G  +  +  + 
Sbjct: 5   GCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEKYQEA 64

Query: 250 VELLHRMDER 259
             L   M ER
Sbjct: 65  SSLTKEMLER 74


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA   +  M +R   P  F Y++L+DGF   G +D A          G + + VTY ++
Sbjct: 271 EEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSI 330

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK   VEE    + EM ++G  P  VTY  L  G  +   +  A +++ +M  S  
Sbjct: 331 IDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGT 390

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T TYN  +DGLCK G + EA   F  +    C   +  YS L+DG C  G +  A E
Sbjct: 391 VVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVE 450

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-C 240
           LF+ +   G  PN+V+YNI+I G C  G++ KA+  F  +  + + P+  TFN+ + G C
Sbjct: 451 LFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLC 510

Query: 241 IRNNETSKVVELLHRM 256
            R +     VEL   M
Sbjct: 511 QRLDTVGDGVELFESM 526



 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 136/263 (51%), Gaps = 5/263 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   L   ++RG  P+A  Y+++IDG C  G ++   E F  M   G   + VTY  
Sbjct: 305 LDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 364

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K K + ++  +Y +ML  G   + VTYN +  GL +  +V  A   F  M+   
Sbjct: 365 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG 424

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A   TY+  +DG C  G +  A ELFR +    CE  + +Y+ +I GLC+ GKL  A+
Sbjct: 425 CVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAY 484

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD---LFLDMEAKGVAPNCVTFNTLM 237
             F+ L +  L P+V T+N  +HG C   ++D   D   LF  M ++G +PN  +++ LM
Sbjct: 485 FYFEKLLQRRLCPDVYTFNSFLHGLCQ--RLDTVGDGVELFESMVSQGTSPNLHSYSILM 542

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  R       +E+ H M  R 
Sbjct: 543 DGICRAGGLEVTLEIFHEMVSRG 565



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+   M+Q G   +   Y+ ++DG C  G +  A   F++M+  GC+  VVTY+ 
Sbjct: 375 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 434

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+C   +V  ++ L+  ML +G  P +V+YN +  GL    ++  A   F+++    
Sbjct: 435 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 494

Query: 121 VAAETSTYNTFIDGLCKN-GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  +  T+N+F+ GLC+    + +  ELF ++        + +YS L+DG+C+ G LE  
Sbjct: 495 LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVT 554

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            E+F  +   G+ P+VV +N +I   C  G++D+A ++F ++E +  AP+  ++ +L+
Sbjct: 555 LEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLL 611



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 120/240 (50%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           F ++ L+   C     + A      M    C   + TY +L++G+ K   ++E+L    E
Sbjct: 255 FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKE 314

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
            + +G  P  VTY ++  GL ++ +VE   + F EM++     +  TY   IDG  K   
Sbjct: 315 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 374

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           I +A  ++R +      +    Y+ ++DGLCK G++  A+  F ++   G +  VVTY+ 
Sbjct: 375 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 434

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++ GFC++G +  A +LF  M  +G  PN V++N ++ G  R  + +K      ++ +R 
Sbjct: 435 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 494



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 142/333 (42%), Gaps = 73/333 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ M+++G  P    Y+ +IDG    G ++ AR +FV M  NGC  +   Y  
Sbjct: 127 LDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTA 186

Query: 61  LINGYCKTKDVEESLNLYSEML----SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           LI+G  K   ++E+L   ++M+    ++G+ P VV +N +   L     +E AL  FDE+
Sbjct: 187 LISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246

Query: 117 QHS-DVA-------------AETS--------------------TYNTFI---------- 132
             S D+              AE +                    TY + +          
Sbjct: 247 DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLD 306

Query: 133 -------------------------DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
                                    DGLCK G + E  E F  +R    E     Y+ LI
Sbjct: 307 EALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 366

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           DG  K   +  A  +++ + + G + + VTYNI++ G C  G++ +A+  FL ME +G  
Sbjct: 367 DGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCV 426

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              VT++ LM G       S  VEL  RM +R 
Sbjct: 427 ATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 459



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 8/264 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M      P+   ++ +I+G C    +D A  +       GC  + VTYN 
Sbjct: 25  LDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNV 81

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G CK + V+++  L  +M  K   PT VTY  L  GL +  +++ A+ + ++M    
Sbjct: 82  FIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKG 141

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   IDGL K G + EA  +F  +    C      Y+ LI GL KIGKL+ A 
Sbjct: 142 NSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEAL 201

Query: 181 ----ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
               ++ ++    G+ P+VV +N++I   C  G ++ A   F +++   +     TFN L
Sbjct: 202 VYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD-DSLDLTHFTFNPL 260

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           +    +   T + +  + +M ER 
Sbjct: 261 VAALCKAERTEEAIAFVKKMSERR 284



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 82/147 (55%), Gaps = 2/147 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGE-IDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           ++QR + P+ + +++ + G C   + +    ELF SM   G   N+ +Y+ L++G C+  
Sbjct: 490 LLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAG 549

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            +E +L ++ EM+S+G+ P VV +NTL   L    +V+ AL++F E++    A +  +Y 
Sbjct: 550 GLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYW 608

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKC 156
           + +D L +   + EA  L   +++  C
Sbjct: 609 SLLDALSRCERMEEARLLSFHMKLQGC 635



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + L++GLCK G+L+ A  L   +P     P++V + ++I+G C + ++D+A  +      
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G  P+ VT+N  + G  +        +LL +MDE+ 
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 106


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  159 bits (403), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 139/258 (53%), Gaps = 3/258 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNT 60
           D+A R+ + ++ RG RP+   YS LIDG C  G +  A +LF  M  +G CM N VTYN+
Sbjct: 106 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 165

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+   ++E++NL   M   G  P VVTY TL +G  ++ +++ A  L ++M    
Sbjct: 166 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 225

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+ + +DGLC+   + +A  +   +R   C   +  Y+ ++DG C++ +LE A 
Sbjct: 226 LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEAR 285

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    L  +   PNVV++NIMI G C   +  +A +L  +   +   P+ V + T++   
Sbjct: 286 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVL 343

Query: 241 IRNNETSKVVELLHRMDE 258
            R  +  +   +  +M E
Sbjct: 344 CREKKVDEACRVYRKMLE 361



 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 134/242 (55%), Gaps = 2/242 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P A  Y++LI G C       A +L   M  +GC+ ++ TY TLI G+CK+K  +++L +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLC 136
           + +++++G RP VVTY+ L  GL +  +++ A+ LF  M +       T TYN+ I G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + EA  L   +        +  Y+ L++G CK+ +L+ A++L   + R GL PNVV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE-LLHR 255
           T+  ++ G C + ++  A  +  +M  K  +P   T+NT++ G  R N+  +  + +L  
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE 291

Query: 256 MD 257
           MD
Sbjct: 292 MD 293



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 117/207 (56%), Gaps = 1/207 (0%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
            VTYN+LI+G CK +   E+ +L  EM+  G  P + TY TL  G  +  + + AL++F+
Sbjct: 54  AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 113

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKI 173
           ++       +  TY+  IDGLCK G + EA +LF R ++   C      Y+ LI G C++
Sbjct: 114 QLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM 173

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GK++ A  L + +   G  P+VVTY  +++GFC   ++D A+DL   M  KG+ PN VTF
Sbjct: 174 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTF 233

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
            +LM G  R N  S  V +L  M  ++
Sbjct: 234 TSLMDGLCRENRLSDAVHILGEMRRKS 260



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 136/259 (52%), Gaps = 3/259 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL+ M+  G  P+ F Y+TLI GFC + + D A  +F  +   G   +VVTY+ LI
Sbjct: 72  EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 131

Query: 63  NGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +G CK   ++E+++L+  M+  G   P  VTYN+L  G   + +++ A+ L + M  +  
Sbjct: 132 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 191

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TY T ++G CK   + +A +L   +        +  ++ L+DGLC+  +L  A  
Sbjct: 192 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVH 251

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   + R    P V TYN ++ G+C   Q+++A    L  E     PN V+FN ++ G  
Sbjct: 252 ILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFML--EEMDCPPNVVSFNIMIRGLC 309

Query: 242 RNNETSKVVELLHRMDERN 260
           + N +S+ +EL+     R 
Sbjct: 310 KVNRSSEAMELVEEARRRR 328



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 129/238 (54%), Gaps = 4/238 (1%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA  L   MI+ G   PN   Y++LI GFC  G++D A  L   M   G   +VVTY 
Sbjct: 140 LKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 199

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL+NG+CK   ++++ +L ++M  KG+ P VVT+ +L  GL   +++  A+ +  EM+  
Sbjct: 200 TLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRK 259

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             +    TYNT +DG C+   + EA +    L  + C   + +++ +I GLCK+ +   A
Sbjct: 260 SCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEA 317

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTL 236
            EL +   R    P+VV Y  +I   C + ++D+A  ++  M E  G  PN +T++T 
Sbjct: 318 MELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           +Q ++      TYN+ I GLCK     EA +L   +    C   I  Y+ LI G CK  K
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA-PNCVTFN 234
            + A  +F+ L   G  P+VVTY+ +I G C +G++ +A DLF  M   G   PN VT+N
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 235 TLMLGCIRNNETSKVVELLHRMDE 258
           +L+ G  R  +  + + LL RM E
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAE 188



 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 36/68 (52%)

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +P  VTYN +I G C   +  +A+DL  +M   G  P+  T+ TL+ G  ++ ++   + 
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 252 LLHRMDER 259
           +  ++  R
Sbjct: 111 VFEQLVAR 118


>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
 gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
          Length = 363

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 130/246 (52%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ PN   Y++LI GFC+T  +D    L   M   GC+ ++ TYNTLI+G CKT  V E 
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L+ EM +K   P V+TY+ L  G  ++ ++  A  LFD+M       +  T+ T ++G
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            C  G + +A  L   +    C   +  Y+ L+DG CK+ ++  A  + + + +    PN
Sbjct: 125 YCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPN 184

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VV Y  +I  FC+ G+   A+ L  +M   GV PN +T+ +L+ G     +  +  ++L 
Sbjct: 185 VVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLE 244

Query: 255 RMDERN 260
           R+ ERN
Sbjct: 245 RL-ERN 249



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 132/259 (50%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    L++ M   G  P+   Y+TLIDG C TG +     LF  M    C  +V+TY+ 
Sbjct: 26  VDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSC 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK   +  +  L+ +ML +   P VVT+ TL  G      V+ A +L +E+  SD
Sbjct: 86  LIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASD 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TY + +DG CK   +VEA  + + +   +C+  +  Y+ LID  C  GK   A+
Sbjct: 146 CSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAY 205

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLMLG 239
           +L + +   G+ PN +TY  +I GFC  G +++AH +   +E  +    +   +  +M G
Sbjct: 206 KLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDG 265

Query: 240 CIRNNETSKVVELLHRMDE 258
             R    S  +ELL  + +
Sbjct: 266 LCRTGRMSAALELLEAIKQ 284



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 1/202 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D M+++   P+   + TL++G+C  G +D A  L   +  + C  +V TY +L++
Sbjct: 99  ACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVD 158

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K + E+  +   M     +P VV Y  L        +   A KL +EM  + V  
Sbjct: 159 GFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQP 218

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              TY + I G C  G + EA ++   L R   C+  + AY  ++DGLC+ G++  A EL
Sbjct: 219 NAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALEL 278

Query: 183 FQSLPRVGLMPNVVTYNIMIHG 204
            +++ + G  P    Y  +I G
Sbjct: 279 LEAIKQSGTPPRHDIYVALIRG 300


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 136/249 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+ P+  +Y+ LIDGFC  G +  A ++   M   GC  +VVTYNT +NG CK K 
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             ++  L++EM+ +G+ P   T+ TL  G  +   ++ AL LF+ M  +++  +  TYNT
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK G +  A EL+  +          +Y  +++G C  G L  A  L   +   G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PN+VT N +I G+C  G M KA++    M + G+ P+  ++NTL+ G ++     K  
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 251 ELLHRMDER 259
            L++ M++R
Sbjct: 663 ILINEMEKR 671



 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 138/260 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +LL+    RG+ P    Y+ ++ G C  G+ DRA+++ + M   G   N  TYNT
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  ++ E+  ++ EM  +G+ P +V++++L   L     +  AL  F EM+ S 
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG C+NG + +A ++   +    C + +  Y+  ++GLCK      A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G++P+  T+  +I G+C DG MDKA +LF  M    + P+ VT+NTL+ G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  E  +  EL   M  ++
Sbjct: 548 CKAGEMGRAKELWDDMIRKD 567



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 138/257 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L + M++RG+ P+ + ++TLI G+C  G +D+A  LF +M       + VTYNTLI
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK  ++  +  L+ +M+ K I P  ++Y T+ +G      +  AL L D+M    + 
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T NT I G C++G + +A E    +          +Y+ LIDG  K   LE A+ L
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + GL  N++TYN++++GFC +G+M +A  +   M   G+ P+  T+++L+ G + 
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVS 724

Query: 243 NNETSKVVELLHRMDER 259
            +   +       M +R
Sbjct: 725 QDNMKEAFRFHDEMLQR 741



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 129/229 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  L + M++  ++P+   Y+TLIDGFC  GE+ RA+EL+  M     + + ++Y T
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG+C +  + E+LNL  +ML KGIRP +VT NTL  G      +  A +   +M  + 
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++ +YNT IDG  K   + +A  L   +     +  I  Y+ +++G C  GK++ A 
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAE 697

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           ++ + +  +G+ P+  TY+ +I+G  +   M +A     +M  +G+ P+
Sbjct: 698 QVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++ D M+ RG   +   Y+T ++G C       A  LF  M   G + +  T+ T
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK  +++++LNL+  M+   ++P  VTYNTL  G  +  ++  A +L+D+M   D
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y T ++G C +G + EA  L   +        +   + LI G C+ G +  A+
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G++P+  +YN +I G+  +  ++KA  L  +ME +G+  N +T+N ++ G 
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687

Query: 241 IRNNETSKVVELLHRMDE 258
               +  +  ++L +M E
Sbjct: 688 CAEGKMQEAEQVLRKMIE 705



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 133/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   +++ G+  N +  + +++  C   + +        M+  G   ++VTYNT
Sbjct: 238 VDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNT 297

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC+   VEE+  L +   S+G+ P ++TYN + +GL +I + + A  +  EM    
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +TYNT +  +C+   I+EA E+F  +        + ++S LI  L + G L  A 
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ + R G++P+ V Y I+I GFC +G +  A  +  +M A+G   + VT+NT + G 
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477

Query: 241 IRNNETSKVVELLHRMDER 259
            +    +    L + M ER
Sbjct: 478 CKKKMFADADMLFNEMVER 496



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 121/250 (48%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  +GV  +   Y+TLI+ +C  G ++ A +L  S    G    ++TYN ++ G CK   
Sbjct: 283 MEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK 342

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            + + ++  EML  G+ P   TYNTL   +     +  A ++FDEM    V  +  ++++
Sbjct: 343 YDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I  L +NG++ +A   FR +           Y+ LIDG C+ G L  A ++   +   G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
              +VVTYN  ++G C       A  LF +M  +G+ P+  TF TL+ G  ++    K +
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522

Query: 251 ELLHRMDERN 260
            L   M   N
Sbjct: 523 NLFEAMVRTN 532



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 14/246 (5%)

Query: 20  AFVYSTLIDGFCLTGEIDRARELF-------VSMDINGCMHNVVTYNTLINGYCKTKDVE 72
             +Y  L+  +    ++    E F       VS+ IN C       N L+ G  +T  V+
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINAC-------NKLLGGLVRTGWVD 239

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            +  +Y E++  GI   V T N + + L +  + E+ +    +M+   V A+  TYNT I
Sbjct: 240 LAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI 299

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           +  C+ G + EA +L  +      E G+  Y+ ++ GLCKIGK + A ++   + ++GL 
Sbjct: 300 NAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           PN  TYN ++   C    + +A ++F +M  +GV P+ V+F++L+    RN    + +  
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419

Query: 253 LHRMDE 258
              M+ 
Sbjct: 420 FREMER 425



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 123/259 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E S    ++ ++GV  +    + L+ G   TG +D A E++  +   G   NV T N 
Sbjct: 203 LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNI 262

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  CK +  E  +   S+M  KG+   +VTYNTL +       VE A +L +      
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  + GLCK G    A ++   +  L        Y+ L+  +C+   +  A 
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  + R G++P++V+++ +I     +G + +A   F +ME  G+ P+ V +  L+ G 
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 241 IRNNETSKVVELLHRMDER 259
            RN   S  +++   M  R
Sbjct: 443 CRNGALSDALKMRDEMLAR 461


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 142/258 (55%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  + L+ M+  G  P+    +TLI GFC  G+  +A ++   ++ +G + +V+TYN 
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK  ++  +L++   M    + P VVTYNT+   L +  +++ A+++ D M   D
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   I+  C++  +  A +L   +R   C   +  Y+ L++G+CK G+L+ A 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    +P  G  PNV+T+NI++   C+ G+   A  L  DM  KG +P+ VTFN L+   
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 241 IRNNETSKVVELLHRMDE 258
            R     + +++L +M +
Sbjct: 355 CRKGLLGRAIDILEKMPQ 372



 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 139/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  M+++G  P+   ++ LI+  C  G + RA ++   M  +GC  N ++YN L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK K ++ ++     M+S+G  P +VTYNT+   L +  +VE A+++ +++     +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT IDGL K G   +A +L   +R    +     YS L+ GL + GK++ A + 
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F    R+G+ PN VT+N ++ G C   Q D+A D  + M  +G  PN  ++  L+ G   
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566

Query: 243 NNETSKVVELLHRM 256
                + +ELL+ +
Sbjct: 567 EGMAKEALELLNEL 580



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 138/260 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +LD M+QR   P+   Y+ LI+  C    +  A +L   M   GC  +VVTYN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   ++E++   ++M S G +P V+T+N +   +    +   A KL  +M    
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    T+N  I+ LC+ G +  A ++   +    C+    +Y+ L+ G CK  K++ A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E  + +   G  P++VTYN M+   C DG+++ A ++   + +KG +P  +T+NT++ G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  +T K ++LL  M  ++
Sbjct: 460 AKAGKTGKAIKLLDEMRAKD 479



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 35/291 (12%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LLD M  RG  P+   Y+ L++G C  G +D A +    M  +GC  NV+T+N ++ 
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVT------------------------------- 92
             C T    ++  L ++ML KG  P+VVT                               
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377

Query: 93  ----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
               YN L HG  +  +++ A++  + M       +  TYNT +  LCK+G + +A E+ 
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             L    C   +  Y+ +IDGL K GK   A +L   +    L P+ +TY+ ++ G   +
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G++D+A   F + E  G+ PN VTFN++MLG  ++ +T + ++ L  M  R
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 144/292 (49%), Gaps = 38/292 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+++L+++   G  P+   Y+ +I G+C  GEI+ A  +   M ++    +VVTYNT++
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTIL 211

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C +  +++++ +   ML +   P V+TY  L         V HA+KL DEM+     
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL------------------------ 158
            +  TYN  ++G+CK G + EA +    +    C+                         
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331

Query: 159 -----------GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                       +  ++ LI+ LC+ G L  A ++ + +P+ G  PN ++YN ++HGFC 
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + +MD+A +    M ++G  P+ VT+NT++    ++ +    VE+L+++  +
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 35/227 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  +L+ M Q G +PN+  Y+ L+ GFC   ++DRA E    M   GC  ++VTYNT
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK   VE+++ + +++ SKG  P ++TYNT+  GL +  +   A+KL DEM+  D
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF--------------------------RTLRVL 154
           +  +T TY++ + GL + G + EA + F                          +T R +
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539

Query: 155 K---------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
                     C+    +Y+ LI+GL   G  + A EL   L   GLM
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           V  N  +    +T ++EE       M+  G  P ++   TL  G   + +   A K+ + 
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           ++ S    +  TYN  I G CK G I  A  +   + V      +  Y+ ++  LC  GK
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGK 219

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           L+ A E+   + +    P+V+TY I+I   C D  +  A  L  +M  +G  P+ VT+N 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+ G  +     + ++ L+ M
Sbjct: 280 LVNGICKEGRLDEAIKFLNDM 300



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 69/125 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M  + ++P+   YS+L+ G    G++D A + F   +  G   N VT+N+++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CK++  + +++    M+++G +P   +Y  L  GL      + AL+L +E+ +  + 
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586

Query: 123 AETST 127
            ++S 
Sbjct: 587 KKSSA 591



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 18/241 (7%)

Query: 24  STLIDGFCLTG----EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYS 79
           S+  +GFCL      E  R  +L VS   +G + + +   +      + ++    ++  S
Sbjct: 8   SSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGS------RKRNRLVLVSAAS 61

Query: 80  EMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
           ++ S G+      + TL  G    +   H   +     +S  A E    N  +  + + G
Sbjct: 62  KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSV-----NSSFALEDVESNNHLRQMVRTG 116

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            + E  +    +        I   + LI G C++GK   A ++ + L   G +P+V+TYN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +MI G+C  G+++ A  +   M    V+P+ VT+NT++     + +  + +E+L RM +R
Sbjct: 177 VMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233

Query: 260 N 260
           +
Sbjct: 234 D 234


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 143/254 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M+++GV P+   +S+L+  F     +D+A   F  M   G + + V Y  L+
Sbjct: 89  EAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLM 148

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+  ++ E+L +  EML +G    V+ YNT+ +GL +   +  A KLFDEM      
Sbjct: 149 HGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGAL 208

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+ T I G C++G + +A  LF T+     +  I AY+ LIDG CK+G++E A EL
Sbjct: 209 PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 268

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +    + PN +TY I+I+ +C+ G + +A  L+  M  KG+ P  VT NT++ G  R
Sbjct: 269 WDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 328

Query: 243 NNETSKVVELLHRM 256
           + ++SK  E L RM
Sbjct: 329 SGDSSKADEFLGRM 342



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +++ M  +G++P+ F Y+ +I+G C  G   RA+ + + M   G   +  TYNT
Sbjct: 17  LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 76

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  +  E+  ++ EML +G+ P +V++++L         ++ AL  F +M+   
Sbjct: 77  LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFG 136

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   + G C+NG ++EA ++   +    C L + AY+ +++GLCK   L  A 
Sbjct: 137 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 196

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G +P+  T+  +IHG C DG M KA  LF  M  + + P+ V +NTL+ G 
Sbjct: 197 KLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGF 256

Query: 241 IRNNETSKVVELLHRMDER 259
            +  E  K  EL   M  R
Sbjct: 257 CKVGEMEKASELWDGMISR 275



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 129/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M + G+ P+  +Y+ L+ G+C  G +  A ++   M   GC+ +V+ YNT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK K + ++  L+ EM+ +G  P   T+ TL HG  +   +  AL LF  M   +
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YNT IDG CK G + +A+EL+  +   K       Y  LI+  C +G +  A+
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L+  +   G+ P +VT N +I G+C  G   KA +    M AKGVAP+ +++NTL+
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 110/205 (53%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           +VTYNTLI  YC+   +EE+  + + M  KG++P++ TYN + +GL +  +   A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM +  ++ +T+TYNT +   C+     EA E+F  +        + ++S L+    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            L+ A   F+ + + GL+P+ V Y +++HG+C +G M +A  +  +M  +G   + + +N
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
           T++ G  +    +   +L   M ER
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVER 205



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 71/133 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  L   M QR ++P+   Y+TLIDGFC  GE+++A EL+  M       N +TY  
Sbjct: 227 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 286

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC    V E+  L+  M+ KGI+PT+VT NT+  G         A +    M    
Sbjct: 287 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346

Query: 121 VAAETSTYNTFID 133
           VA +  +YNT I+
Sbjct: 347 VAPDHISYNTLIN 359


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 144/262 (54%), Gaps = 5/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYN 59
           +DE  ++   M++  V PN + Y+ +++G+C  G ++ A + +VSM +  G   +  TY 
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQ-YVSMIVEAGLDPDFFTYT 257

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI GYC+ KD++ +  ++ EM  KG R   V Y  L HGL    +++ A+ LF +M+  
Sbjct: 258 SLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDD 317

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           D      TY   I  LC +    EA  L + +     +  I  Y+ LID LC   KLE A
Sbjct: 318 DCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKA 377

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL   +   GLMPNV+TYN +I+G+C  G ++ A D+   ME++ + PN  T+N L+ G
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKG 437

Query: 240 -CIRNNETSKVVELLHRMDERN 260
            C RN    K + +L++M ER 
Sbjct: 438 YCKRN--VHKAMGVLNKMLERK 457



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 131/238 (55%), Gaps = 2/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  LL  M+++G+ PN   Y+ LI+G+C  G I+ A ++   M+      N  TYN 
Sbjct: 374 LEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNE 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK ++V +++ + ++ML + + P VVTYN+L  G       + A +L   M    
Sbjct: 434 LIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + ID LCK+  + EA +LF +L        +  Y+ LIDG CK GK+  A 
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            + + +     +PN +T+N +IHG C DG++ +A  L   M    + P  V+ +T+++
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPT-VSTDTILI 609



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 138/294 (46%), Gaps = 34/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++   M  +G R N   Y+ LI G C+   ID A +LFV M  + C   V TY  
Sbjct: 269 LDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTV 328

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   C ++   E+LNL  EM  KGI+P + TY  L   L    ++E A +L  +M    
Sbjct: 329 LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-----RTLR--------VLK--CELGIE---- 161
           +     TYN  I+G CK G I +A ++      R LR        ++K  C+  +     
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMG 448

Query: 162 ---------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           Y+ LIDG C+ G  ++A+ L   +   GL+P+  TY  MI   C
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              ++++A DLF  +E K V PN V +  L+ G  +  + ++   +L +M  +N
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKN 562



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +L+ M++R V P+   Y++LIDG C +G  D A  L   M+  G + +  TY ++I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMI 504

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK+K VEE+ +L+  +  K + P VV Y  L  G  +  +V  A  + ++M   +  
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCL 564

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + T+N  I GLC +G + EA  L   +  +  +  +   + LI  L K G  + A+  
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +   G  P+  TY   I  +C +G++  A D+   M+  GV+P+  T+++L+ G   
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684

Query: 243 NNETSKVVELLHRM 256
              T+    +L RM
Sbjct: 685 LGRTNSAFVVLKRM 698



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 18/275 (6%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A RLL LM  RG+ P+ + Y+++ID  C +  ++ A +LF S++    + NVV Y  L
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYCK   V E+  +  +MLSK   P  +T+N L HGL    +++ A  L ++M   D+
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               ST    I  L K+G    A   F+ +     +     Y+  I   C+ G+L+ A +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAED 658

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-- 239
           +   +   G+ P++ TY+ +I G+ + G+ + A  +   M   G  P+  TF +L+    
Sbjct: 659 MVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLL 718

Query: 240 --------------CIRNN--ETSKVVELLHRMDE 258
                         C+ +N  E   VVELL +M E
Sbjct: 719 EMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVE 753



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 57/308 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D + Q+ V PN  +Y+ LIDG+C  G+++ A  +   M    C+ N +T+N 
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++E+  L  +M+   ++PTV T   L H L +    +HA + F +M  S 
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY TFI   C+ G + +A ++   ++       +  YS LI G   +G+  +A+
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAF 692

Query: 181 -----------------------------------------------------ELFQSLP 187
                                                                EL + + 
Sbjct: 693 VVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMV 752

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLGCI---RN 243
             G+ PN  +Y  ++ G C  G +  A  +F  M+ K G++P+ + FN L+  C    ++
Sbjct: 753 EHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKH 812

Query: 244 NETSKVVE 251
           NE +KVV+
Sbjct: 813 NEAAKVVD 820



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 116/292 (39%), Gaps = 54/292 (18%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A R    M+  G +P+A  Y+T I  +C  G +  A ++   M  NG   ++ TY++L
Sbjct: 619 DHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSL 678

Query: 62  ING----------------------------------------YCKTKDVEESL------ 75
           I G                                        Y K K  E  +      
Sbjct: 679 IKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNM 738

Query: 76  -------NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETST 127
                   L  +M+  G+ P   +Y  L  G+ EI  +  A K+FD MQ  + ++     
Sbjct: 739 MEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELV 798

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +N  +   CK     EAA++   +  +     +E+   LI  L K G+ E    +FQ+L 
Sbjct: 799 FNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLL 858

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + G   + + + I+I G    G ++  ++LF  ME  G   +  T++ L+ G
Sbjct: 859 QCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 55/103 (53%)

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           LK +L I  Y+ L++ L + G ++   +++  +    + PN+ TYN M++G+C  G +++
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEE 236

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           A+     +   G+ P+  T+ +L++G  +  +     ++   M
Sbjct: 237 ANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEM 279


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A   L  M + G++   + YS+LI G C  G++  A+ LF  M  NG   NVV Y +
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++  +  LY EM  KGI P   T+  L  GL   +++  A KLF EM   +
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  I+G CK G  V A EL   +           Y  LI GLC  G++  A 
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    L       N + ++ ++HG+C +G++D A D   +M  +GVA + V ++ L+ G 
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645

Query: 241 IRNNETSKVVELLHRMDER 259
           +R  +   +++LL +M ++
Sbjct: 646 LRQQDRRSIIDLLKQMHDQ 664



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 146/327 (44%), Gaps = 70/327 (21%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D ++  G+RP+ +VY+ ++   C   +  RARE+   M+ +GC  +V TYN  I 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM------- 116
           G CK + V E++ + + +  KG+R  V TY TL  GL ++ + E   ++ +EM       
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 117 ----------------------------QHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                                       +   VA     YN  I+ +CK+G + EA  LF
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 149 R------------TLRVL-------------------KCELGIEA----YSCLIDGLCKI 173
                        T  +L                     E+GI+A    YS LI G CK+
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GKL  A  LF  +   GL PNVV Y  +I G+C +G++  A  L+ +M  KG++PN  TF
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
             L+ G    N  ++  +L   M E N
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWN 525



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 2/242 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M  +G+RP+  +Y+T+ID     G +  A  L+  M   GC+ NVVTY  LING C
Sbjct: 657 LLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLC 716

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   ++++  L  EML+    P   TY      L     +E A++L D +      A T 
Sbjct: 717 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEG-FLANTV 775

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G CK G I EAAE+   +          +YS +I   C+ G L+ A +L++S+
Sbjct: 776 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 835

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNNE 245
              G+ P+ V YN +I+G C  G++ KA +L  DM  +GV PN  T+N+L+ G C+ ++ 
Sbjct: 836 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 895

Query: 246 TS 247
           +S
Sbjct: 896 SS 897



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 128/258 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +    +++ MI+ G  P+    S L+DG    G I  A +L   +   G   ++  YN L
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   ++E+ +L++ M  KG+ P  VTY+ L     +  +++ AL    +M    +
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A    Y++ I G CK G +  A  LF  +     +  +  Y+ LI G CK G+L  A+ 
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L+  +   G+ PN  T+  +I G C+  +M +A+ LF +M    V PN VT+N L+ G  
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHC 541

Query: 242 RNNETSKVVELLHRMDER 259
           +   T +  ELL  M E+
Sbjct: 542 KEGNTVRAFELLDEMVEK 559



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 34/291 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  LLD M+++G+ P+ + Y  LI G C TG +  ARE    +       N + ++ L+
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALL 607

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   ++++L+   EML +G+   +V Y+ L +G+         + L  +M    + 
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR 667

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   Y T ID   K G +  A  L+  +    C   +  Y+ LI+GLCKIG ++ A  L
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727

Query: 183 FQ------SLPRV----------------------------GLMPNVVTYNIMIHGFCND 208
            +      SLP                              G + N VTYNI+I GFC  
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKL 787

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G++ +A ++ ++M   G++P+C++++T++    R  +  + ++L   M  R
Sbjct: 788 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 838



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 117/234 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D MI  G++PN  +Y++LI G+C  GE+  A  L+  M   G   N  T+  LI+
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS 503

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C    + E+  L+ EM+   + P  VTYN L  G  +      A +L DEM    +  
Sbjct: 504 GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVP 563

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T TY   I GLC  G + EA E    L+  + +L    +S L+ G CK G+L+ A +  
Sbjct: 564 DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDAC 623

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + +   G+  ++V Y+++I+G           DL   M  +G+ P+ V + T++
Sbjct: 624 REMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMI 677



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 131/260 (50%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      M+ RGV  +   YS LI G     +     +L   M   G   + V Y T
Sbjct: 616 LDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTT 675

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+   K  +++ +  L+  M+S+G  P VVTY  L +GL +I  ++ A  L  EM  S+
Sbjct: 676 MIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN 735

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETA 179
                +TY  F+D L   G I +A +L   L  L+  L     Y+ LI G CK+G+++ A
Sbjct: 736 SLPNQNTYACFLDYLTSEGNIEKAIQLHDVL--LEGFLANTVTYNILIRGFCKLGRIQEA 793

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+  ++   G+ P+ ++Y+ +I+ +C  G + +A  L+  M  +GV P+ V +N L+ G
Sbjct: 794 AEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYG 853

Query: 240 CIRNNETSKVVELLHRMDER 259
           C    E +K  EL   M  R
Sbjct: 854 CCVTGELTKAFELRDDMMRR 873



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 110/239 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A RL   M  +G+ PN + ++ LI G C    +  A +LF  M     + N VTYN 
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV 535

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK  +   +  L  EM+ KG+ P   TY  L  GL    +V  A +  +++Q   
Sbjct: 536 LIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  ++  + G CK G + +A +  R +      + +  YS LI G+ +     +  
Sbjct: 596 QKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSII 655

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +   GL P+ V Y  MI      G +  A  L+  M ++G  PN VT+  L+ G
Sbjct: 656 DLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALING 714



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 35/244 (14%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G +  + T + ++NG  + +    +L+L+ E++S G+RP V  Y  +   L E+     A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL-----FRTLR------------ 152
            ++   M+ S      +TYN FI GLCKN  + EA E+     ++ LR            
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294

Query: 153 ---VLKCELGIE---------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
              V + E G E               A S L+DGL K G + +A++L   + + G+ P+
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +  YN +I+  C DG++D+A  LF +M  KG+ PN VT++ L+    +  +    +  L 
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414

Query: 255 RMDE 258
           +M E
Sbjct: 415 KMTE 418



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 1/136 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +L D++++ G   N   Y+ LI GFC  G I  A E+ V+M  +G   + ++Y+T
Sbjct: 756 IEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I  YC+  D++E++ L+  ML++G+ P  V YN L +G     ++  A +L D+M    
Sbjct: 815 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874

Query: 121 VAAETSTYNTFIDGLC 136
           V    +TYN+ I G C
Sbjct: 875 VKPNRATYNSLIHGTC 890


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 133/250 (53%), Gaps = 2/250 (0%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLINGYCKT 68
           ++ +R   P+   YS LIDGFC   E+ RA +L+  M D+N C+ NV TYN  +NG  + 
Sbjct: 472 MVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN-CVPNVTTYNAFLNGLMRK 530

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             + ++  +Y EM++ G  P V+TY+TL HG     + + A +LF+ M          TY
Sbjct: 531 GRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTY 590

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  + GLCK     EA ELFR +    C+     Y+ L+ G C +GK+E A E+F  +  
Sbjct: 591 NCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVS 650

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  P+VV YN ++ GF   G+  +A  LF  M ++   P+ V+ N ++ G  +      
Sbjct: 651 KGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDD 710

Query: 249 VVELLHRMDE 258
            VE+  RM++
Sbjct: 711 AVEVFERMEQ 720



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 135/236 (57%), Gaps = 1/236 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + + M+  G  P+   YSTLI GF L  + D+A ELF +M   GC  N VTYN L+
Sbjct: 535 DAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLL 594

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK    +E+  L+ +M+ +G  P  VTY TL +G   + ++E A+++FDEM      
Sbjct: 595 HGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 654

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YN  + G  + G   EA +LF+ +   +C+    +++ +IDGL K  +L+ A E+
Sbjct: 655 PDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEV 714

Query: 183 FQSLPRV-GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           F+ + +  G  P++VTYN +I G C + ++ +A  +F +++   ++P+   FN L+
Sbjct: 715 FERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 770



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 147/298 (49%), Gaps = 38/298 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--INGCMHNVVTY 58
           +D A  LL+ MI+RG  P+   +S LI+  C   +I  A+E    MD  I+    +  +Y
Sbjct: 390 VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSY 449

Query: 59  NTLINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           N+L+N  CK K V ++  ++S M+S +   P VV+Y+ L  G  +I ++  A KL+ +M 
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAA-------------------------------- 145
             +     +TYN F++GL + G I +A                                 
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569

Query: 146 ---ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
              ELF T+    C      Y+CL+ GLCK  K + A ELF+ +   G  P+ VTY  ++
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +GFCN G++++A ++F +M +KG  P+ V +N L+ G  R  +  +  +L   M  R 
Sbjct: 630 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 135/258 (52%), Gaps = 1/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A +L   MI     PN   Y+  ++G    G I  A+ ++  M   GC  +V+TY+T
Sbjct: 498 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYST 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+   +  +++  L+  M+S+G RP  VTYN L HGL +  + + A +LF +M    
Sbjct: 558 LIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 617

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T + G C  G I +A E+F  +     +  + AY+CL+ G  + GK   A 
Sbjct: 618 CDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAK 677

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLG 239
           +LFQ +      P+ V++NIMI G     ++D A ++F  ME   G +P+ VT+N+L+ G
Sbjct: 678 QLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 737

Query: 240 CIRNNETSKVVELLHRMD 257
                  S+ +++   +D
Sbjct: 738 LCGEQRLSEAMKVFKEID 755



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 110/204 (53%), Gaps = 1/204 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L + MI RG RPNA  Y+ L+ G C   + D A ELF  M   GC  + VTY TL
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G+C    +E+++ ++ EM+SKG  P VV YN L  G F   +   A +LF  M     
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             +T ++N  IDGL K   + +A E+F R  +   C   +  Y+ LI GLC   +L  A 
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHG 204
           ++F+ + R+ L P+   +N+++  
Sbjct: 749 KVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 132/263 (50%), Gaps = 3/263 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A      +  R ++P++    ++I   C  G +D A  L  +M   G   ++ T++ 
Sbjct: 355 IDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSM 414

Query: 61  LINGYCKTKDVEESLNLYSEMLSK--GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-Q 117
           LIN  CK   ++E+      M  K      +  +YN+L + L +  +V  A  +F  M  
Sbjct: 415 LINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVS 474

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                 +  +Y+  IDG CK   +  A +L++ +  L C   +  Y+  ++GL + G++ 
Sbjct: 475 ERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIA 534

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +++ +   G  P+V+TY+ +IHGF    + D+AH+LF  M ++G  PN VT+N L+
Sbjct: 535 DAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLL 594

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  + ++  +  EL  +M ER 
Sbjct: 595 HGLCKESKPDEAHELFRKMVERG 617



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 37/294 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA      +  R  + + F Y+ L+D      ++ +A ++F  M   G + N  TY  L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL---------------------- 100
              C  ++ +E++  + EM+ KG +P+   Y  +   L                      
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 101 ------------FEIH-QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                       F I  +   A KLF  M  S    + + Y+  +   CK   + EA +L
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291

Query: 148 FRTLRV-LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           F  + V  K  L   A++  + GLCK GK+E A+E  +++ +  L  +   Y+++I    
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLI 350

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             G++DKA +  L++  + + P+  T ++++    +       + LL  M +R 
Sbjct: 351 ESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 404



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 116/296 (39%), Gaps = 39/296 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++ + M+ +GV PN F Y+ L+   C     D A   F  M   G   +   Y  
Sbjct: 145 LKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQK 204

Query: 61  ------------------------------------LINGYCKTKDVEESLNLYSEMLSK 84
                                               L+N   + K +E S  L+  M+  
Sbjct: 205 VTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS-KLFRAMVKS 263

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HSDVAAETSTYNTFIDGLCKNGYIVE 143
           G +P    Y+ +     ++  ++ A KLF EM   S        +  F+ GLCK+G I +
Sbjct: 264 GCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQ 323

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A E  RT++          Y  LI  L + G+++ A E    +    + P+  T + +I 
Sbjct: 324 AFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQ 382

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             C  G++D A  L   M  +G  P+  T + L+    + ++  +  E L  MD +
Sbjct: 383 ELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRK 438



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 74/136 (54%), Gaps = 1/136 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M+ +G  P+   Y+ L+ GF   G+   A++LF  M    C  + V++N 
Sbjct: 638 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNI 697

Query: 61  LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +I+G  K K +++++ ++  M    G  P +VTYN+L  GL    ++  A+K+F E+   
Sbjct: 698 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 757

Query: 120 DVAAETSTYNTFIDGL 135
            ++ +   +N  ++ +
Sbjct: 758 KLSPDPHAFNVLLEAI 773


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 136/249 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+ P+  +Y+ LIDGFC  G +  A ++   M   GC  +VVTYNT +NG CK K 
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             ++  L++EM+ +G+ P   T+ TL  G  +   ++ AL LF+ M  +++  +  TYNT
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK G +  A EL+  +          +Y  +++G C  G L  A  L   +   G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PN+VT N +I G+C  G M KA++    M + G+ P+  ++NTL+ G ++     K  
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 251 ELLHRMDER 259
            L++ M++R
Sbjct: 663 ILINEMEKR 671



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 138/260 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +LL+    RG+ P    Y+ ++ G C  G+ DRA+++ + M   G   N  TYNT
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  ++ E+  ++ EM  +G+ P +V++++L   L     +  AL  F EM+ S 
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG C+NG + +A ++   +    C + +  Y+  ++GLCK      A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G++P+  T+  +I G+C DG MDKA +LF  M    + P+ VT+NTL+ G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  E  +  EL   M  ++
Sbjct: 548 CKAGEMGRAKELWDDMIRKD 567



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 138/257 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L + M++RG+ P+ + ++TLI G+C  G +D+A  LF +M       + VTYNTLI
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK  ++  +  L+ +M+ K I P  ++Y T+ +G      +  AL L D+M    + 
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T NT I G C++G + +A E    +          +Y+ LIDG  K   LE A+ L
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + GL  N++TYN++++GFC +G+M +A  +   M   G+ P+  T+++L+ G + 
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVS 724

Query: 243 NNETSKVVELLHRMDER 259
            +   +       M +R
Sbjct: 725 QDNMKEAFRFHDEMLQR 741



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 129/229 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  L + M++  ++P+   Y+TLIDGFC  GE+ RA+EL+  M     + + ++Y T
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG+C +  + E+LNL  +ML KGIRP +VT NTL  G      +  A +   +M  + 
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++ +YNT IDG  K   + +A  L   +     +  I  Y+ +++G C  GK++ A 
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAE 697

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           ++ + +  +G+ P+  TY+ +I+G  +   M +A     +M  +G+ P+
Sbjct: 698 QVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++ D M+ RG   +   Y+T ++G C       A  LF  M   G + +  T+ T
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK  +++++LNL+  M+   ++P  VTYNTL  G  +  ++  A +L+D+M   D
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y T ++G C +G + EA  L   +        +   + LI G C+ G +  A+
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G++P+  +YN +I G+  +  ++KA  L  +ME +G+  N +T+N ++ G 
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687

Query: 241 IRNNETSKVVELLHRMDE 258
               +  +  ++L +M E
Sbjct: 688 CAEGKMQEAEQVLRKMIE 705



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 133/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   +++ G+  N +  + +++  C   + +        M+  G   ++VTYNT
Sbjct: 238 VDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNT 297

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC+   VEE+  L +   S+G+ P ++TYN + +GL +I + + A  +  EM    
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +TYNT +  +C+   I+EA E+F  +        + ++S LI  L + G L  A 
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ + R G++P+ V Y I+I GFC +G +  A  +  +M A+G   + VT+NT + G 
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477

Query: 241 IRNNETSKVVELLHRMDER 259
            +    +    L + M ER
Sbjct: 478 CKKKMFADADMLFNEMVER 496



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 121/250 (48%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  +GV  +   Y+TLI+ +C  G ++ A +L  S    G    ++TYN ++ G CK   
Sbjct: 283 MEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK 342

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            + + ++  EML  G+ P   TYNTL   +     +  A ++FDEM    V  +  ++++
Sbjct: 343 YDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I  L +NG++ +A   FR +           Y+ LIDG C+ G L  A ++   +   G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
              +VVTYN  ++G C       A  LF +M  +G+ P+  TF TL+ G  ++    K +
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522

Query: 251 ELLHRMDERN 260
            L   M   N
Sbjct: 523 NLFEAMVRTN 532



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 14/246 (5%)

Query: 20  AFVYSTLIDGFCLTGEIDRARELF-------VSMDINGCMHNVVTYNTLINGYCKTKDVE 72
             +Y  L+  +    ++    E F       VS+ IN C       N L+ G  +T  V+
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINAC-------NKLLGGLVRTGWVD 239

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            +  +Y E++  GI   V T N + + L +  + E+ +    +M+   V A+  TYNT I
Sbjct: 240 LAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI 299

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           +  C+ G + EA +L  +      E G+  Y+ ++ GLCKIGK + A ++   + ++GL 
Sbjct: 300 NAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           PN  TYN ++   C    + +A ++F +M  +GV P+ V+F++L+    RN    + +  
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419

Query: 253 LHRMDE 258
              M+ 
Sbjct: 420 FREMER 425



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 123/259 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E S    ++ ++GV  +    + L+ G   TG +D A E++  +   G   NV T N 
Sbjct: 203 LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNI 262

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  CK +  E  +   S+M  KG+   +VTYNTL +       VE A +L +      
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  + GLCK G    A ++   +  L        Y+ L+  +C+   +  A 
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  + R G++P++V+++ +I     +G + +A   F +ME  G+ P+ V +  L+ G 
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 241 IRNNETSKVVELLHRMDER 259
            RN   S  +++   M  R
Sbjct: 443 CRNGALSDALKMRDEMLAR 461


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 143/274 (52%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           M  A  L ++M+  G +PN   Y+ LIDG C  G+I++A +++  M              
Sbjct: 546 MPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFK 605

Query: 47  -DINGCM-HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
            D N C   NV+TY  L++G CK   V+E+  L   ML+ G  P  + Y+ +  G  +I 
Sbjct: 606 LDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIG 665

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +++ A ++F +M     +    TY++FID L K+  +    ++   +    C   +  Y+
Sbjct: 666 KLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYT 725

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            ++DGLCKIGK + A++L   +   G  PNVVTY  MI GF   G++++  +LF DM +K
Sbjct: 726 EMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSK 785

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G APN +T+  L+  C  N    +  +LL  M +
Sbjct: 786 GCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQ 819



 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 142/307 (46%), Gaps = 51/307 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + M + G+ P+ + Y+ LID FC  G I +AR+ F  M   GC  NVVTY  
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTA 535

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           LI+ Y K K +  +  L+  ML +G +P VVTY  L  G  +  Q+E A +++  M    
Sbjct: 536 LIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDI 595

Query: 117 QHSDV------------AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           + SD+                 TY   +DGLCK   + EA EL  T+    CE     Y 
Sbjct: 596 ESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYD 655

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGL--------------------------------- 191
            +IDG CKIGKL+ A E+F  +   G                                  
Sbjct: 656 AVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLEN 715

Query: 192 --MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
              PNVV Y  M+ G C  G+ D+A+ L L ME KG  PN VT+  ++ G  ++ +  + 
Sbjct: 716 SCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQC 775

Query: 250 VELLHRM 256
           +EL   M
Sbjct: 776 LELFRDM 782



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 140/273 (51%), Gaps = 16/273 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +++  M+ +G  P+   YS +I   C   ++++A  LF  M  NG + +V TY  L
Sbjct: 442 DQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTIL 501

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   ++++   + EML KG  P VVTY  L H   +  Q+  A +LF+ M     
Sbjct: 502 IDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGC 561

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLR----------VLK-----CE-LGIEAYSC 165
                TY   IDG CK G I +A +++  +R            K     CE   +  Y  
Sbjct: 562 KPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGA 621

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DGLCK  +++ A EL  ++   G  PN + Y+ +I GFC  G++  A ++F  M  +G
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +PN  T+++ +    ++N    V+++L +M E
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLE 714



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 6/257 (2%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L +MI  G  PN  ++++LI  +C + +   A +LF  M   GC    + YN  I   
Sbjct: 335 RILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSV 394

Query: 66  CKTKDVEES--LNL----YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           C  ++   S  L+L    YSEML  G+    V  +     L    + + A K+  EM   
Sbjct: 395 CSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGK 454

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               + STY+  I  LC    + +A  LF  ++       +  Y+ LID  CK G ++ A
Sbjct: 455 GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA 514

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + F  +   G  PNVVTY  +IH +    QM  A +LF  M  +G  PN VT+  L+ G
Sbjct: 515 RKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDG 574

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  K  ++  RM
Sbjct: 575 HCKAGQIEKACQIYARM 591



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 25/280 (8%)

Query: 4   ASRLLDL-------MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV 56
           +S +LDL       M+  GV  N    S      C  G+ D+A ++   M   G + +  
Sbjct: 402 SSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDS 461

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           TY+ +I   C    VE++ +L+ EM   GI P+V TY  L     +   ++ A K FDEM
Sbjct: 462 TYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM 521

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
            H        TY   I    K   +  A ELF  + +  C+  +  Y+ LIDG CK G++
Sbjct: 522 LHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQI 581

Query: 177 ETAWELFQSLPRVGLM-----------------PNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           E A +++  + R  +                  PNV+TY  ++ G C   ++ +AH+L  
Sbjct: 582 EKACQIYARM-RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLD 640

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            M A G  PN + ++ ++ G  +  +     E+  +M ER
Sbjct: 641 TMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 103/208 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LLD M+  G  PN  VY  +IDGFC  G++  A+E+F  M   G   N+ TY++
Sbjct: 632 VKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSS 691

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+   K   ++  L + S+ML     P VV Y  +  GL +I + + A KL  +M+   
Sbjct: 692 FIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKG 751

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   IDG  K+G I +  ELFR +    C      Y  LI+  C  G L+ A+
Sbjct: 752 CNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAY 811

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           +L   + +     +++++  +I GF  +
Sbjct: 812 KLLDEMKQTYWPKHILSHRKIIEGFSQE 839



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 4/254 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   ++L  M++    PN  +Y+ ++DG C  G+ D A +L + M+  GC  NVVTY  
Sbjct: 702 LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTA 761

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+ K+  +E+ L L+ +M SKG  P  +TY  L +       ++ A KL DEM+ + 
Sbjct: 762 MIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTY 821

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 ++   I+G  +    + +  L   L   +       Y  LID   K G+LE A 
Sbjct: 822 WPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVAL 879

Query: 181 ELFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           +L + +       + N   Y  +I    +  ++DKA +L+  M +K V P       L+ 
Sbjct: 880 DLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIK 939

Query: 239 GCIRNNETSKVVEL 252
           G I+ ++  + ++L
Sbjct: 940 GLIKVDKWQEALQL 953



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 115/280 (41%), Gaps = 41/280 (14%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   Y+ ++ G C     + A ++   M  + C+ NVVTY  L++G  +   +     +
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            S M+++G  P    +N+L H   +     +A KLF +M           YN FI  +C 
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCS 396

Query: 138 N----------------------GYIVEAAELFRTLRVL------------KCEL----- 158
           N                      G ++    +    R L             CE+     
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456

Query: 159 --GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
                 YS +I  LC   K+E A+ LF+ + R G++P+V TY I+I  FC  G + +A  
Sbjct: 457 VPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            F +M  KG  PN VT+  L+   ++  +     EL   M
Sbjct: 517 WFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMM 556



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 6/233 (2%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           L+   C  G  + A E    +   G   +  TYN LI  + +   ++ +  +  EMLS  
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA 241

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                 T +   + L +  +   A  L DE +  D   +T  YN  + GLC+     EA 
Sbjct: 242 FVMDRYTLSCFAYSLCKGGKCREAFDLIDEAE--DFVPDTVFYNRMVSGLCEASLFEEAM 299

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++   +R   C   +  Y  L+ G  + G+L     +   +   G  PN   +N +IH +
Sbjct: 300 DILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAY 359

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE---TSKVVELLHR 255
           C       A+ LF  M   G  P  + +N + +G + +NE   +S +++L+ +
Sbjct: 360 CKSRDYSYAYKLFKKMIKCGCQPGYLVYN-IFIGSVCSNEEQPSSDILDLVEK 411



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 6/247 (2%)

Query: 13  QRGVRPNAFVYSTLIDGF-CLTGEIDRARELFVSMDINGCMHNVVT--YNTLINGYCKTK 69
           Q G      V+  L+D   C     DR    F+ M+I    H ++    N L+   C+  
Sbjct: 132 QIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFL-MEIKDDDHELLRRLLNFLVRKCCRNG 190

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
               +L     +   G +P+  TYN L        +++ A  +  EM       +  T +
Sbjct: 191 WWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLS 250

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            F   LCK G   EA +L         +     Y+ ++ GLC+    E A ++   +   
Sbjct: 251 CFAYSLCKGGKCREAFDLIDEAEDFVPDTVF--YNRMVSGLCEASLFEEAMDILHRMRSS 308

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
             +PNVVTY I++ G    GQ+ +   +   M  +G  PN   FN+L+    ++ + S  
Sbjct: 309 SCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYA 368

Query: 250 VELLHRM 256
            +L  +M
Sbjct: 369 YKLFKKM 375



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNTLING 64
           LLD + +    P   +Y  LID +   G ++ A +L   +S   +  + N   Y +LI  
Sbjct: 846 LLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIEN 905

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
                 V+++L LY+ M+SK + P +     L  GL ++ + + AL+L D +   D+
Sbjct: 906 LSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDI 962


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA++ L  M+ +G  P+ F Y+T+IDG+C    +  A EL       G + + VTY +
Sbjct: 200 VQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCS 259

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C   DVE +L L++E  +K ++P +V YN+L  GL     + HAL++ +EM    
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTL-----RVLKCELGI 160
              +  TYN  I+GLCK G I +AA +               F T+     + LK +  +
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSAL 379

Query: 161 E---------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +                Y+ +++GLCK GK +   E F+ +   G  PN +TYNI+I  F
Sbjct: 380 QLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 439

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C   Q+++A  + + M   G+ P+ ++FNTL+ G  RN +      L  ++DE+
Sbjct: 440 CKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEK 493



 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L++ M    + P+   Y+TL+ G C   ++  A +    M   GC+ +  TYNT
Sbjct: 166 LEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNT 224

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK   ++E+  L  + + KG  P  VTY +L +GL     VE AL+LF+E Q  D
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN+ + GLC+ G I+ A ++   +    C   I  Y+ +I+GLCK+G +  A 
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +       G +P+V T+N MI G+C   ++D A  L   M   G+AP+ +T+N+++ G 
Sbjct: 345 VVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGL 404

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +V E    M
Sbjct: 405 CKAGKAKEVNETFEEM 420



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 134/237 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L +    + ++P+  VY++L+ G C  G I  A ++   M  +GC  ++ TYN 
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNI 329

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++ ++  + ++ + KG  P V T+NT+  G  +  +++ AL+L + M    
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  TYN+ ++GLCK G   E  E F  + +  C      Y+ LI+  CKI +LE A 
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 449

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +   + + GL+P+ +++N +IHGFC +G +D A+ LF  ++ KG +    TFN L+
Sbjct: 450 GVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 506



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ +++  I +G  P+ F ++T+IDG+C   ++D A +L   M + G   + +TYN+
Sbjct: 340 ISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNS 399

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK    +E    + EM+ KG RP  +TYN L     +I+Q+E A  +   M    
Sbjct: 400 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDG 459

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T ++NT I G C+NG +  A  LF+ L         + ++ LI        ++ A 
Sbjct: 460 LVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 519

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   G  P++ TY +++ G C    +D+A+    +M +KG  P+  TF  ++   
Sbjct: 520 KIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSL 579

Query: 241 IRNNETSKVVELLHRM 256
             N+  S+ V ++H M
Sbjct: 580 AMNHRVSEAVAIIHIM 595



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 133/255 (52%), Gaps = 1/255 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RLL  + +RG       Y T++ G    G    AR LF  M       +V T+N +++
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C+  D+ ES  L +++L +G+     T N    GL E  ++E A+ L + M  + +A 
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD-AYIAP 182

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT + GLCK+  + EAA+  R +    C      Y+ +IDG CK   L+ A EL 
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +     G +P+ VTY  +I+G C +G +++A +LF + +AK + P+ V +N+L+ G  R 
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 302

Query: 244 NETSKVVELLHRMDE 258
                 +++++ M E
Sbjct: 303 GLILHALQVMNEMVE 317



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 126/259 (48%), Gaps = 1/259 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++   M+  GV P+A  ++  I  FC+TG    A  L  S+   GC    + Y T+
Sbjct: 27  DQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTV 86

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G        ++ +L+ EML + + P V T+N + H L +   +  +  L  ++    +
Sbjct: 87  VRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGM 146

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    T N +I GLC+ G + EA  L  ++        +  Y+ L+ GLCK  K++ A +
Sbjct: 147 SVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAP-DVVTYNTLMRGLCKDSKVQEAAQ 205

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             + +   G +P+  TYN +I G+C    + +A +L  D   KG  P+ VT+ +L+ G  
Sbjct: 206 YLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLC 265

Query: 242 RNNETSKVVELLHRMDERN 260
              +  + +EL +    ++
Sbjct: 266 AEGDVERALELFNEAQAKD 284



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 119/241 (49%), Gaps = 5/241 (2%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P A  Y+ ++D    T   D+A +++V M   G   +  T+   I  +C T     +
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L   +  +G     + Y T+  GL+       A  LFDEM   DV  + +T+N  +  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLM 192
           LC+ G I+E+  L    +VLK  + +  ++C   I GLC+ G+LE A  L +S+    + 
Sbjct: 125 LCQKGDIMESGALLA--KVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IA 181

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P+VVTYN ++ G C D ++ +A      M  +G  P+  T+NT++ G  + +   +  EL
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241

Query: 253 L 253
           L
Sbjct: 242 L 242



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 110/231 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L++ M   G+ P+A  Y+++++G C  G+     E F  M + GC  N +TYN 
Sbjct: 375 LDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 434

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +CK   +EE+  +   M   G+ P  +++NTL HG      ++ A  LF ++    
Sbjct: 435 LIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKG 494

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +A   T+N  I        +  A ++F  +     +  +  Y  L+DG CK   ++ A+
Sbjct: 495 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAY 554

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
                +   G +P++ T+  +++    + ++ +A  +   M   GV P  V
Sbjct: 555 VHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 83/207 (40%), Gaps = 36/207 (17%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P    YN +   L      + A K++  M  + VA +  T+   I   C  G    A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY------ 198
             L R+L    C++   AY  ++ GL   G    A  LF  + R  + P+V T+      
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 199 -----------------------------NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
                                        NI I G C  G++++A  L   M+A  +AP+
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPD 183

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            VT+NTLM G  ++++  +  + L RM
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRM 210


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL  +M   GV+P+ + +S LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++    L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  PN VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GEI  A+ +F S+   G   +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L S M + G++P V T++ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E++R +        +  Y+ LI GLCK G L+   +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  +   +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 125/234 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L   M  +G   +V T++ LIN
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    +  
Sbjct: 215 GLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +  +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  +   Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL +G  +I  ++   +L   MQ
Sbjct: 139 FNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  T++  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +  DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 116/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   +I    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  +S LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEM 302


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y  MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 127/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++  M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 53/257 (20%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLS-----------------KGI-RPTVVTYN 94
           HN+ +Y T+I+  C  + + E+  L   ++S                 KG  R  +  ++
Sbjct: 11  HNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVFS 70

Query: 95  TLFHGLFEI---------------HQ-----------VEHALKL---------FDEMQHS 119
            L     E                H+           +EH +KL         ++E    
Sbjct: 71  GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
              A    +N  +    K G I  A  +F  +        + +++ L++G  K+G L+  
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L  ++   G+ P+V TY+++I+G C + +MD A++LF +M   G+ PN VTF TL+ G
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 240 CIRNNETSKVVELLHRM 256
             +N      +E+   M
Sbjct: 251 HCKNGRVDLAMEIYKLM 267


>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
 gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
 gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
          Length = 410

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 133/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + GV PN + Y+ LI  +C TGE   AR LF  M + G +HNVV+YN LI G C+   
Sbjct: 99  MRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSK 158

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +++++ L+  M  +GIRP++VT+N L  G  +  ++ +AL  F++M+ + +     TYN 
Sbjct: 159 LKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNE 218

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G C+   I  A   F  ++          Y+ LI    K  +++ A+ +   + + G
Sbjct: 219 LICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAG 278

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L  +V +Y +++H  C +G+M  A  LF  M+ KGV PN V ++ ++ G  R   + K +
Sbjct: 279 LEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKAL 338

Query: 251 ELLHRM 256
            L+  M
Sbjct: 339 RLIMEM 344



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 118/235 (50%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + L+   C +G++  AR +F  M   G   N VTY  LINGY      E    L++EM  
Sbjct: 42  TALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRR 101

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G+ P + TYN L        + + A  LFDEM    V     +YN  I GLC++  + +
Sbjct: 102 DGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKD 161

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A +LF  +R       I  ++ LIDG  K GK+  A   F  +   GL P+VVTYN +I 
Sbjct: 162 AVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELIC 221

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           GFC    + +A   FLDM+ +G+AP  VT+  L+    + NE  +   +L  M++
Sbjct: 222 GFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEK 276



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 125/232 (53%), Gaps = 1/232 (0%)

Query: 3   EASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +++RLL D M  +GV  N   Y+ LI G C   ++  A +LF +M   G   ++VT+N L
Sbjct: 125 KSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLL 184

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K   +  +L+ +++M + G+ P+VVTYN L  G   +  +  A++ F +M+   +
Sbjct: 185 IDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGL 244

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    TY   I    K   +  A  +   +     E+ +++Y  L+  LC  GK+  A +
Sbjct: 245 APTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARK 304

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           LFQS+   G+ PN V Y++MI+G+  +G   KA  L ++M   G+ PN  ++
Sbjct: 305 LFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASY 356



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 119/226 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A +L + M + G+RP+   ++ LIDG+   G++  A   F  M   G   +VVTYN 
Sbjct: 159 LKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNE 218

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+ +D+  ++  + +M  +G+ PT VTY  L     + ++++ A  +  EM+ + 
Sbjct: 219 LICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAG 278

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y   +  LC  G ++ A +LF+++ +   +     Y  +I G  + G    A 
Sbjct: 279 LEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKAL 338

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   + + GL+PNV +Y + I   CN+G+  +A  L  DME  G+
Sbjct: 339 RLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGL 384



 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 1/238 (0%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           + ++   C+  E+  A  +      +G    +V     L++  C++ DV E+  ++  M 
Sbjct: 6   AAVVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMP 65

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
             G+ P  VTY  L +G F     E    LF EM+   V     TYN  I   C+ G   
Sbjct: 66  RLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFK 125

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
            A  LF  + V      + +Y+ LI GLC+  KL+ A +LF+++ R G+ P++VT+N++I
Sbjct: 126 SARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLI 185

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G+   G+M  A   F  M+A G+ P+ VT+N L+ G  R  + ++ V     M ER 
Sbjct: 186 DGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERG 243


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RLL  M       + F YS L+D     G   +A E+F +M   GCM + V YN LI
Sbjct: 100 QARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLI 159

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +   K   V+E+L L  +M  KGI P   TYN +   L    + E A   F  M+    +
Sbjct: 160 SCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS 219

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT ++GL K     EA +LF  ++  KC   +  +  LID L K G++E A E 
Sbjct: 220 PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQ 279

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L ++G +PN   YN +I GFC  GQ+DK ++LF DM      P+ +T+  L+LG  R
Sbjct: 280 SARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSR 339

Query: 243 NNETSKVVELLHRM 256
              TS  +ELL  M
Sbjct: 340 RGHTSMAMELLQEM 353



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 1/240 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLN 76
           P+   Y+TLI G+C  G+ DRA ++F  +   G C  N V+++TL+   CK     ++L 
Sbjct: 9   PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           ++ EML  G++  V   NTL H    +  +  A +L   M       +  TY+  +D L 
Sbjct: 69  VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G   +A E+F  ++   C      Y+ LI  L K GK++ A EL + + R G+MP+  
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TYNI+I    + G+ +KA+  F  M+ +  +P+ VT+NTL+ G  +   T +  +L   M
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 120/236 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL+ M ++G+ P+   Y+ +ID     G  ++A   F  M       +VVTYNT
Sbjct: 168 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 227

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K +  +E+ +L+ EM +    P + T+ TL   L +  ++E AL+    +    
Sbjct: 228 LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 287

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               +  YN  I G C++G + +  ELF+ +    C      Y+ L+ G  + G    A 
Sbjct: 288 HVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAM 347

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           EL Q + R G  P + TYN++I      GQ++ A+ LF +M AKG  P+  T++ L
Sbjct: 348 ELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 106/188 (56%), Gaps = 1/188 (0%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHA 109
           C  +VV YNTLI GYCK  D + +L+++  +  +G  +P  V+++TL   L ++ +   A
Sbjct: 7   CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           L +F EM  + + A+ +  NT I   C+ G + +A  L   +      L +  YS L+D 
Sbjct: 67  LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           L K G+   A E+F ++ + G MP+ V YN++I      G++D+A +L  DM  KG+ P+
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186

Query: 230 CVTFNTLM 237
           C T+N ++
Sbjct: 187 CRTYNIVI 194



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 1/140 (0%)

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-KCELGIEAYSCLIDGLCKIGKLET 178
           D A +   YNT I G CK G    A ++FR L+    C+    ++  L+  LCK+ +   
Sbjct: 6   DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 65

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +FQ +   GL  +V   N +IH  C  G + +A  L   M A     +  T++ LM 
Sbjct: 66  ALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMD 125

Query: 239 GCIRNNETSKVVELLHRMDE 258
              +    +K +E+   M +
Sbjct: 126 ALGKAGRAAKALEVFSNMQK 145


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 143/258 (55%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+ + + P+   Y  LIDG      +  A +LF      GC   VVTYNT
Sbjct: 221 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 280

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +I+G CK   +E +L LY +M+ +  ++P + TY+ L +GL   ++ E A +L++EM  +
Sbjct: 281 MIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDT 340

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLET 178
             + +  TYNT +DGLCK+G   +A E+FR + V   C+  +  Y+ LID  CK+ +L  
Sbjct: 341 GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGD 400

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +L + +    L+P+ VT+  +I   C + ++D+AH+LF  +  K   P+ V FNT++ 
Sbjct: 401 AVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLA 459

Query: 239 GCIRNNETSKVVELLHRM 256
           G  +        +L  RM
Sbjct: 460 GYCKITRIDDAKKLHDRM 477



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 131/240 (54%), Gaps = 3/240 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   Y+TL++GF   G++ +A  LF  M  +G +  + ++N ++ G C    +  +  +
Sbjct: 135 PDEVSYNTLMNGFFKAGDVKKALALFGEMKDSG-IAVLRSHNIVLRGLCSGGKISMAWEV 193

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M S    P +++Y  +  GL +  +V+ A+ LF +M    +  +  TY   IDGL K
Sbjct: 194 FKDM-SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGK 252

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR-VGLMPNVV 196
              + EA +LF   R   C   +  Y+ +IDGLCK G++E A  L+  + R   L P++ 
Sbjct: 253 QRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMF 312

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY+ +I+G     + +KA++L+ +M   G +P+ VT+NTL+ G  ++    K +E+  +M
Sbjct: 313 TYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM 372



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 119/221 (53%), Gaps = 2/221 (0%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D++ +  ++P+ F YS LI+G  L+   ++A EL+  M   GC  +VVTYNTL++G CK+
Sbjct: 300 DMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKS 359

Query: 69  KDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              ++++ ++ +M    +  P V+TY  L     ++ ++  A+KL  EM+   +  +  T
Sbjct: 360 GCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVT 419

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           + T I  LCK   I EA ELF ++    C+     ++ ++ G CKI +++ A +L   + 
Sbjct: 420 FTTVIQKLCKESRIDEAHELFESIGK-TCKPDSVLFNTMLAGYCKITRIDDAKKLHDRML 478

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
             G  P + TY  ++ GFC  G+   A  ++ +M   G  P
Sbjct: 479 DSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 2/187 (1%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           HN  T N L++ Y K + VE++   +   +     P  V+YNTL +G F+   V+ AL L
Sbjct: 100 HNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALAL 159

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           F EM+ S +A   S +N  + GLC  G I  A E+F+ +  +     + +Y+ +IDGLCK
Sbjct: 160 FGEMKDSGIAVLRS-HNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCK 217

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
             K++ A  LF+ +    + P+VVTY  +I G     ++ +A+DLF +  AKG  P  VT
Sbjct: 218 SRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVT 277

Query: 233 FNTLMLG 239
           +NT++ G
Sbjct: 278 YNTMIDG 284



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A +L   M  R + P+A  ++T+I   C    ID A ELF S+    C  + V +NT
Sbjct: 398 LGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG-KTCKPDSVLFNT 456

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           ++ GYCK   ++++  L+  ML  G  PT+ TY  L  G     +   AL ++ EM
Sbjct: 457 MLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEM 512



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L +  I +  +P++ +++T++ G+C    ID A++L   M  +GC   + TY  
Sbjct: 433 IDEAHELFE-SIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTA 491

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRP 88
           L+ G+C+T    ++L +Y EM+  G  P
Sbjct: 492 LVTGFCRTGRYSDALIMYHEMIEMGFPP 519


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 137/256 (53%), Gaps = 3/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E S +   M Q+G   +A  Y+ ++DGFC +G++D+A E+   M +      V TY ++I
Sbjct: 584 ETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSII 643

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  SKGI   V+ Y++L  G  ++ +++ A  + +EM    + 
Sbjct: 644 DGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 703

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N+ +D L K   I EA   F++++ +KC      YS LI+GLC++ K   A+  
Sbjct: 704 PNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVF 763

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +Q + + GL+PNVVTY  MI G    G +  A  LF   +A G  P+  +FN L+ G   
Sbjct: 764 WQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSH 823

Query: 243 NNETSKVVELLHRMDE 258
            N   + +E  H  +E
Sbjct: 824 AN---RAIEAYHVFEE 836



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 136/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RL + M+  G   N  VY++LI  F + G  +   ++F  M+  GC  ++   NT
Sbjct: 477 VDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNT 536

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  DVE+   ++ ++   G  P V +Y+ L HGL +  Q      +F  M+   
Sbjct: 537 YMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG 596

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   YN  +DG CK+G + +A E+   ++V +    +  Y  +IDGL KI +L+ A+
Sbjct: 597 FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAY 656

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G+  NV+ Y+ +I GF   G++D+A+ +  +M  KG+ PN  T+N+LM   
Sbjct: 657 MLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDAL 716

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  E ++ +     M E
Sbjct: 717 VKAEEINEALICFQSMKE 734



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 121/238 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  + +   QRG  PN+  Y +LIDG    G +D A  LF +M   G   N V Y +L
Sbjct: 443 EPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSL 502

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I  +      E+   ++ EM  +G +P +   NT    +F+   VE    +F++++    
Sbjct: 503 IRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF 562

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +Y+  I GL K G   E + +F  ++     L   AY+ ++DG CK GKL+ A+E
Sbjct: 563 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + + +    + P V TY  +I G     ++D+A+ LF + ++KG+  N + +++L+ G
Sbjct: 623 VLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 680



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 5/243 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +    +  +G++P+   Y+++I   C  G +  A ELF  M+    +     YNT
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GY      E +  L  ++  +G  P+VV++N++   L +  +V+ AL LF+ M+  D
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-D 386

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               +STYN  ID LC  G + EA  +   +        +   + ++D LCK  K E A+
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAY 446

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F++  + G  PN VTY  +I G    G +D A+ LF +M   G   N V + +L    
Sbjct: 447 EMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSL---- 502

Query: 241 IRN 243
           IRN
Sbjct: 503 IRN 505



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + M ++   PN+  Y+ +ID  C+ G+++ A  +   M+  G   N++T N 
Sbjct: 373 VDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNI 431

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK K  E +  ++     +G  P  VTY +L  GL +   V+ A +LF+ M  + 
Sbjct: 432 MVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTG 491

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A    Y + I     +G   +  ++F+ +    C+  +   +  +D + K G +E   
Sbjct: 492 HNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGR 551

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G +P+V +Y+I+IHG    GQ  +   +F  M+ +G A +   +N ++ G 
Sbjct: 552 AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGF 611

Query: 241 IRNNETSKVVELLHRM 256
            ++ +  K  E+L  M
Sbjct: 612 CKSGKLDKAYEVLEEM 627



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 96/179 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ M+++G+ PN + +++L+D      EI+ A   F SM    C  N  TY+ 
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 746

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+ +   ++   + EM  +G+ P VVTY T+  GL ++  +  A  LF+  + + 
Sbjct: 747 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANG 806

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
              + +++N  I+G+      +EA  +F   R+  C + ++A   L+D L K   LE A
Sbjct: 807 GTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 7/240 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A R++  M +   RP    Y+ LI       + +RA EL   M   G    V  + T
Sbjct: 163 LDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTT 222

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+    +   VE +L L  E+    + P +V YN       +   V+ A K F E++   
Sbjct: 223 LVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQG 282

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF---RTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           +  +  +Y + I  LCK G + EA ELF    T R + C     AY+ +I G    G+ E
Sbjct: 283 LKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAY---AYNTMIMGYGSAGQFE 339

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A++L   L   G +P+VV++N ++       ++D+A  LF  M+ K   PN  T+N ++
Sbjct: 340 NAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIII 398



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 88/184 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L +    +G+  N  VYS+LIDGF   G ID A  +   M   G   NV T+N+
Sbjct: 652 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 711

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K +++ E+L  +  M      P   TY+ L +GL  + +   A   + EMQ   
Sbjct: 712 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 771

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T I GL K G I +A  LF   +         +++ LI+G+    +   A+
Sbjct: 772 LVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAY 831

Query: 181 ELFQ 184
            +F+
Sbjct: 832 HVFE 835



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 91/199 (45%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   +T+ ++++  + + M     RP    Y  L   + E  Q E AL+L  +MQ   
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  + T +  L + G +  A  L   ++    E  I  Y+  ID   K G ++ AW
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F  L   GL P+ V+Y  MI   C  G++ +A +LF  ME +   P    +NT+++G 
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 241 IRNNETSKVVELLHRMDER 259
               +     +LL ++ ER
Sbjct: 333 GSAGQFENAYKLLDQLKER 351



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 104/235 (44%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + L+     T  +D A  +  +M           Y  LI    + +  E +L L  +M  
Sbjct: 151 ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQE 210

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G    V  + TL   L    +VE AL L DE++ S +  +   YN  ID   K G +  
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 270

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A + F  L+    +    +Y+ +I  LCK G+L  A ELF  +     +P    YN MI 
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIM 330

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G+ + GQ + A+ L   ++ +G  P+ V+FN+++    +  +  + + L   M +
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK 385



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN + YS LI+G C   + ++A   +  M   G + NVVTY T+I G  K  ++ ++ +L
Sbjct: 739 PNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSL 798

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +    + G  P   ++N L  G+   ++   A  +F+E +            + +D L K
Sbjct: 799 FERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNK 858

Query: 138 NGYIVEAA 145
              + +AA
Sbjct: 859 AECLEQAA 866


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 125/260 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L   M  R   P+A+ Y TL+DG C    ID A  L   M I GC  +  T+N 
Sbjct: 197 VDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNV 256

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  D      L   M  KG  P  VTYNTL HGL    +++ AL L D M  S 
Sbjct: 257 LINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSK 316

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GL K G  ++ A +   +      +    YS L+ GL K GK E A 
Sbjct: 317 CVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAM 376

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G   N V Y+ ++ G C D + D+A  +  +M  KG APN  TF++LM G 
Sbjct: 377 RLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGF 436

Query: 241 IRNNETSKVVELLHRMDERN 260
                + K +E+   M + N
Sbjct: 437 FEVGNSHKAIEVWKDMTKIN 456



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 128/238 (53%), Gaps = 4/238 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFV-SMDINGCMHNVVTYNTL 61
           + +R+L LM +RG   N +VYS L+ G    G+ + A  LF  SMD  GC  N V Y+ L
Sbjct: 339 DGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMD-KGCKLNTVLYSAL 397

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G C+ +  +E++ + SEM  KG  P   T+++L  G FE+     A++++ +M   + 
Sbjct: 398 VDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINC 457

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A     Y+  I GLCK+G ++EA  ++  +    C   + AYS +I GLC  G +E A +
Sbjct: 458 AENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALK 517

Query: 182 LFQSL--PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L+  +        P+V+TYNI+ +  C    + +A DL   M  +G  P+ VT N  +
Sbjct: 518 LYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFL 575



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 37/292 (12%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           ++L+D M  +G  PN   Y+TLI G CL G++D+A  L   M  + C+ N VTY T+ING
Sbjct: 271 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIING 330

Query: 65  YCKTKDV-----------------------------------EESLNLYSEMLSKGIRPT 89
             K                                       EE++ L+ E + KG +  
Sbjct: 331 LVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLN 390

Query: 90  VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
            V Y+ L  GL    + + A+K+  EM     A    T+++ + G  + G   +A E+++
Sbjct: 391 TVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWK 450

Query: 150 TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
            +  + C      YS LI GLCK GK+  A  ++  +   G  P+VV Y+ MI G C+ G
Sbjct: 451 DMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAG 510

Query: 210 QMDKAHDLFLDMEA--KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +++A  L+ +M        P+ +T+N L     + +  S+ V+LL+ M +R
Sbjct: 511 SVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDR 562



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD M   G  P+   ++ LI+G C  G+  R  +L  +M + GC+ N VTYNT
Sbjct: 232 IDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNT 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++++L+L   M+S    P  VTY T+ +GL +  +     ++   M+   
Sbjct: 292 LIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERG 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y+  + GL K G   EA  LF+      C+L    YS L+DGLC+  K + A 
Sbjct: 352 YIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAM 411

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G  PN  T++ ++ GF   G   KA +++ DM     A N V ++ L+ G 
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471

Query: 241 IRNNETSKVVELLHRM 256
            ++ +  + + +  +M
Sbjct: 472 CKDGKVMEAMMVWAKM 487



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI--NGCMHNVVTYNT 60
           EA  +   M+  G RP+   YS++I G C  G ++ A +L+  M         +V+TYN 
Sbjct: 479 EAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNI 538

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE-IHQVEHALKLFDEM 116
           L N  CK   +  +++L + ML +G  P +VT N     L E +   +   K  DE+
Sbjct: 539 LFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDEL 595



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 4/118 (3%)

Query: 143 EAAELFRTLRV-LKCELGIEAYSCLIDGLCKIGKLETAWELFQSL---PRVGLMPNVVTY 198
           +A ELF  +     C+  +++++ +++ + + G  + A E +  +     + ++PNV+++
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSF 184

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N++I   C  G +D A +LF +M  +   P+  T+ TLM G  + +   + V LL  M
Sbjct: 185 NLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEM 242


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 142/263 (53%), Gaps = 5/263 (1%)

Query: 1   MDEASRLLDLMIQRG---VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           MDEA  LL+ M+ RG   V+PN   ++++I G C  G + +A ++   M+  GCM N+VT
Sbjct: 306 MDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN LI G  +   V +++ L  EM S G+ P   TY+ L  G  ++ QV+ A  L   M+
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +  E   Y   +  +C+ G +  A  LF  +      L + AYS +I G CK G L+
Sbjct: 425 DRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLK 483

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           TA EL +S+   GL P+ VTY+I+I+ F   G M+ A+ +   M A G  P+   F++L+
Sbjct: 484 TAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G     E +KV+EL+  M  +N
Sbjct: 544 QGYSTKGEINKVLELIREMITKN 566



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 138/259 (53%), Gaps = 6/259 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVT 57
           + EA+ LLD +    VR +A  Y+T++   C  G  DRA  L  +M +     C  N V+
Sbjct: 61  LGEATSLLDAL--PSVR-DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  L+   C  +  ++++ L   M S G+R  VVTY TL  GL +  +V+ A++L  EM 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S +      Y++ + G CK+G   +  ++F  +     E  +  Y+ LID LCK+GK +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +   + R GL PNVVTYN++I+  C +G + +A  +   M  KGVAP+ VT+NTL+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 238 LGCIRNNETSKVVELLHRM 256
            G     E  + + LL  M
Sbjct: 298 KGLSDVLEMDEAMWLLEEM 316



 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 134/257 (52%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  LL  M   GVR +   Y TLI G C   E+D+A EL   M  +G   NVV Y++L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + GYCK+   E+   ++ EM  KGI P VV Y  L   L ++ + + A  + D M    +
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  I+ +CK G + EA  + + +        +  Y+ LI GL  + +++ A  
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 182 LFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L + + R    + PNVVT+N +I G C+ G+M +A  +   ME  G   N VT+N L+ G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 240 CIRNNETSKVVELLHRM 256
            +R ++  K +EL+  M
Sbjct: 372 LLRVHKVRKAMELMDEM 388



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 11/221 (4%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM---LSKGIRPTVVTYNTLFHGLFE 102
           +D    + + V+YNT++   C+    + +  L   M        RP  V+Y  L   L  
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127

Query: 103 IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
               + A+ L   M+ + V A+  TY T I GLC    + +A EL   +    CE GIE 
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM----CESGIEP 183

Query: 163 ----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               YS L+ G CK G+ E   ++F  +   G+ P+VV Y  +I   C  G+  KAH + 
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             M  +G+ PN VT+N L+    +     + + +L +M E+
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK 284



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 4/187 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M  RG+ P  F Y  L+   C  G ++RAR LF  MD N  + +VV Y+T
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYST 471

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK  D++ +  L   ++ +G+ P  VTY+ + +   +   +E A  +  +M  S 
Sbjct: 472 MIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + + +++ I G    G I +  EL R +      L  +  S L   L    + +   
Sbjct: 532 FLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKA-- 589

Query: 181 ELFQSLP 187
            L QSLP
Sbjct: 590 -LLQSLP 595


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 143/292 (48%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ LL  M+++G+ P+   ++ +   F  TG I RA+ +F  M   G  H+VVTY ++I
Sbjct: 276 EAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSII 335

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +C    +++++ ++  M+SKG  P +VTY +L HG  E   +  A+    EM ++ + 
Sbjct: 336 GAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLD 395

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLR-----------------VLKCELGIEAYSC 165
               T++T I G+CK G  V A ELF  +                  + KC    EA S 
Sbjct: 396 PNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSL 455

Query: 166 LID------------------GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
             +                  G+C  GKL  A ELF  L   G+  +VVTYNIMI G C 
Sbjct: 456 FRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCK 515

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +G +D A DL + ME  G  PN  T+N  + G +R  + SK  + L  M ++
Sbjct: 516 EGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDK 567



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 124/257 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R +D +   G   +++    + +G C  G    A      M+   C  +V  Y+ ++
Sbjct: 171 QAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVV 230

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V E+LNL+S+M  KGI+P + TYN L HGL    + + A  L   M    + 
Sbjct: 231 DGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIM 290

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N       K G I  A  +F  +  +  E  +  Y+ +I   C + +++ A E+
Sbjct: 291 PDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEV 350

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G +PN+VTY  +IHG+C    M+KA     +M   G+ PN VT++TL+ G  +
Sbjct: 351 FDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCK 410

Query: 243 NNETSKVVELLHRMDER 259
             +     EL   M + 
Sbjct: 411 AGKPVAAKELFLVMHKH 427



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  + DLMI +G  PN   Y++LI G+C T  +++A      M  NG   NVVT++T
Sbjct: 344 MKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWST 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK      +  L+  M   G  P + T   +  GLF+ +    A+ LF E++  +
Sbjct: 404 LIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMN 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  YN  +DG+C +G + +A ELF  L     ++ +  Y+ +I GLCK G L+ A 
Sbjct: 464 WDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAE 523

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G  PN  TYN+ + G     Q+ K+    + M+ KG   +  T    ++  
Sbjct: 524 DLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATT-TKFLINY 582

Query: 241 IRNNETSKVVELL 253
              N+ ++ +E+ 
Sbjct: 583 FSANKENRALEVF 595



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 118/257 (45%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A   L  M ++    +   YS ++DG C  G +  A  LF  M   G   ++ TYN LI+
Sbjct: 207 ALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIH 266

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C     +E+  L + M+ KGI P V T+N +    F+   +  A  +F  M H  +  
Sbjct: 267 GLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEH 326

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY + I   C    + +A E+F  +    C   I  Y+ LI G C+   +  A    
Sbjct: 327 DVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFL 386

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL PNVVT++ +I G C  G+   A +LFL M   G  PN  T   ++ G  + 
Sbjct: 387 GEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKC 446

Query: 244 NETSKVVELLHRMDERN 260
           N  S+ + L   +++ N
Sbjct: 447 NFHSEAMSLFRELEKMN 463



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 98/198 (49%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A  L   M   G    V T N +IN  C+        ++   M   G+ P++VT+NT+ +
Sbjct: 102 AISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVN 161

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           GL     V  A++  D ++     +++ T     +GLCK G+   A    + +    C L
Sbjct: 162 GLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNL 221

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            + AYS ++DGLCK G +  A  LF  +   G+ P++ TYN +IHG CN  +  +A  L 
Sbjct: 222 DVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLL 281

Query: 219 LDMEAKGVAPNCVTFNTL 236
            +M  KG+ P+  TFN +
Sbjct: 282 ANMMRKGIMPDVQTFNVI 299



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 118/256 (46%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L+  M   GV+P     + +I+  C          +   M   G   ++VT+NT++N
Sbjct: 102 AISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVN 161

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C   +V +++     +   G      T   + +GL ++     AL    +M+  +   
Sbjct: 162 GLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNL 221

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           + + Y+  +DGLCK+G + EA  LF  +     +  +  Y+CLI GLC   + + A  L 
Sbjct: 222 DVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLL 281

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            ++ R G+MP+V T+N++   F   G + +A  +F  M   G+  + VT+ +++      
Sbjct: 282 ANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCML 341

Query: 244 NETSKVVELLHRMDER 259
           N+    +E+   M  +
Sbjct: 342 NQMKDAMEVFDLMISK 357



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 35/224 (15%)

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K V+ +L+ Y +M++    P V  +N LF  + ++     A+ L   M +  V     T
Sbjct: 61  AKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHT 120

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC---------------- 171
            N  I+ LC+  + V    +   +  +  E  I  ++ +++GLC                
Sbjct: 121 LNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLK 180

Query: 172 -------------------KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                              K+G    A    + +       +V  Y+ ++ G C DG + 
Sbjct: 181 DMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVF 240

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +A +LF  M  KG+ P+  T+N L+ G    +   +   LL  M
Sbjct: 241 EALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANM 284



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 1/140 (0%)

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S V+   ++   F+D +     +  A + +  +  +K    ++ ++ L   + K+    T
Sbjct: 42  SFVSDSDTSRAQFLDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTT 101

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  L + +  +G+ P V T NI+I+  C          +   M   GV P+ VTFNT++ 
Sbjct: 102 AISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVN 161

Query: 239 G-CIRNNETSKVVELLHRMD 257
           G C+  N    +  + H  D
Sbjct: 162 GLCVEGNVAQAIRFVDHLKD 181


>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 376

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ +L++ + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT I+GLCKN    EA  L + L     + G+  YS L+ GLC   K+E A 
Sbjct: 195 CPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 125/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCKRISDAILFLHDAVTKKIVLTKIT 376



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLAGASKFEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
                 S  +  LH
Sbjct: 350 CSCKRISDAILFLH 363


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A ELF  M   G + N VT+ T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK   V+ ++ +Y +MLS+G  P ++TYNTL +GL +   ++    L DEM  + 
Sbjct: 247 LIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ L+ GLC+ G+ + A 
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++F+ +  VGL P+  TY ++I+ FC  G +  A  L  +M+  G  P  VT
Sbjct: 367 KMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ 
Sbjct: 152 MRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   V+E+  L++EML +G+ P  VT+ TL     +   V+ A++++ +M    
Sbjct: 212 LINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYNT I GLCK G + +   L   + +   +     Y+ LIDG CK G LETA+
Sbjct: 272 FSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAF 331

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E  + + +  +  + V Y  ++ G C +G+ D A  +F +M + G+ P+  T+  ++   
Sbjct: 332 EFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEF 391

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +      LL  M  
Sbjct: 392 CKKGDVRTASRLLKEMQR 409



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 128/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ ++  FC  GE+ RA+ +F ++   G   +VV++NTL+NGY +  D
Sbjct: 127 ILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGD 186

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G++P V TY+ L +GL +  +V+ A +LF+EM    +     T+ T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTT 246

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CKNG +  A E+++ +        +  Y+ LI GLCK G L+    L   +   G
Sbjct: 247 LIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNG 306

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +        
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAE 366

Query: 251 ELLHRM 256
           ++   M
Sbjct: 367 KMFREM 372



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 116/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S L+  +  +G +  A + F     +       T   ++    K K  +   +
Sbjct: 63  RSDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWD 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N + H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I   C +G +D A +++  M ++G +P+ +T+NTL+ G  +  +  +V  L+  M
Sbjct: 243 TFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEM 302



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 99/215 (46%), Gaps = 7/215 (3%)

Query: 51  CMHN-VVTYNTLINGYCKTKDVEESLNLYSEML-SKGI-RPTVVTYNTLFHGLFEIHQVE 107
           C H  ++   +LI      K  + +  +++ +L +KG  R  +  ++ L     E   V 
Sbjct: 24  CTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIYVFSGLMTAYLESGFVH 83

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY--SC 165
            A++ F   +         T    ++ L K  Y     + ++   +L+C      Y  + 
Sbjct: 84  DAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYK--EILECGYPASLYFFNI 141

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           ++   CK G++  A  +F ++ + GL P+VV++N +++G+   G +D+   L   M A G
Sbjct: 142 VMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 201

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           V P+  T++ L+ G  + ++  +  EL + M +R 
Sbjct: 202 VQPDVYTYSVLINGLCKESKVDEANELFNEMLDRG 236


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RLL ++ + G+ PN  +Y+TLIDG C  G +  A+ LF  MD  G + N  TY+ L+NG+
Sbjct: 179 RLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGF 238

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K     E   +Y  M   GI P    YN L         V+ A K+F EM+   +A   
Sbjct: 239 FKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGV 298

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN  I GLC+     EA +L   +  +     I  Y+ LI+G C +GK++TA  LF  
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQ 358

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           L   GL P +VTYN +I G+     +  A DL  +ME + +AP+ VT+  L+    R N 
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNY 418

Query: 246 TSKVVELLHRMDERN 260
           T K  E +H + E++
Sbjct: 419 TEKACE-MHSLMEKS 432



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 139/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  ++ + M + G+ PNA+ Y+ LI  +C  G +D+A ++F  M   G    V+TYN LI
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILI 305

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+ K   E++ L  ++   G+ P +VTYN L +G  ++ +++ A++LF++++ S ++
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT I G  K   +  A +L + +           Y+ LID   ++   E A E+
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEM 425

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + GL+P+V TY+++IHG C  G M +A  LF  +    + PN V +NT++ G  +
Sbjct: 426 HSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 243 NNETSKVVELLHRM 256
              + + + LL+ M
Sbjct: 486 EGSSYRALRLLNEM 499



 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 131/241 (54%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +A+ +  +I G C  G   +   L   ++  G   NVV Y TLI+G CK  +V  + NL+
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLF 216

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M   G+ P   TY+ L +G F+        ++++ M+ S +      YN  I   C  
Sbjct: 217 CKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNG 276

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + +A ++F  +R      G+  Y+ LI GLC+  K   A +L   + +VGL PN+VTY
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           NI+I+GFC+ G+MD A  LF  +++ G++P  VT+NTL+ G  +    +  ++L+  M+E
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 259 R 259
           R
Sbjct: 397 R 397



 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M ++G+      Y+ LI G C   +   A +L   ++  G   N+VTYN 
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C    ++ ++ L++++ S G+ PT+VTYNTL  G  ++  +  AL L  EM+   
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TY   ID   +  Y  +A E+   +        +  YS LI GLC  G ++ A 
Sbjct: 399 IAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEAS 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+SL  + L PN V YN MIHG+C +G   +A  L  +M   G+ PN  +F +  +G 
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS-TIGL 517

Query: 241 IRNNETSKVVELL 253
           +  +E  K  ELL
Sbjct: 518 LCRDEKWKEAELL 530



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 120/227 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L+  + + G+ PN   Y+ LI+GFC  G++D A  LF  +  +G    +VTYNTLI
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLI 375

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GY K +++  +L+L  EM  + I P+ VTY  L      ++  E A ++   M+ S + 
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLV 435

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  I GLC +G + EA++LF++L  +  +     Y+ +I G CK G    A  L
Sbjct: 436 PDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRL 495

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
              +   G++PNV ++   I   C D +  +A  L   M   G+ P+
Sbjct: 496 LNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 41/290 (14%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL-FVSMDINGCMHNVVTYNTLIN 63
           S +L+ ++  G+ P A    +LI    ++G I  +  L         C+     Y+T++N
Sbjct: 42  SFILNHLLSSGMLPQA---QSLILRL-ISGRIPSSLMLQLTQAHFTPCLTYTPLYDTIVN 97

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            Y  +   +++L     M+ +G  P   T+N L   L   +  + A  +F+E++ S V  
Sbjct: 98  AYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK-SKVVL 156

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  ++   I G C+ GY V+   L   L        +  Y+ LIDG CK G +  A  LF
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLF 216

Query: 184 QSLPRVGLMPNVVTYNIMIHGF-----------------------------------CND 208
             + R+GL+PN  TY+++++GF                                   CN 
Sbjct: 217 CKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNG 276

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G +DKA  +F +M  KG+A   +T+N L+ G  R  +  + V+L+H++++
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 65/127 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  +  LM + G+ P+ + YS LI G C+ G +  A +LF S+       N V YNT+
Sbjct: 420 EKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTM 479

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYCK      +L L +EM+  G+ P V ++ +    L    + + A  L  +M +S +
Sbjct: 480 IHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGL 539

Query: 122 AAETSTY 128
               S Y
Sbjct: 540 KPSVSLY 546



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 54/93 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EAS+L   + +  ++PN+ +Y+T+I G+C  G   RA  L   M  +G + NV ++ +
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
            I   C+ +  +E+  L  +M++ G++P+V  Y
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 142/263 (53%), Gaps = 5/263 (1%)

Query: 1   MDEASRLLDLMIQRG---VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           MDEA  LL+ M+ RG   V+PN   ++++I G C  G + +A ++   M+  GCM N+VT
Sbjct: 306 MDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN LI G  +   V +++ L  EM S G+ P   TY+ L  G  ++ QV+ A  L   M+
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +  E   Y   +  +C+ G +  A  LF  +      L + AYS +I G CK G L+
Sbjct: 425 DRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLK 483

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           TA EL +S+   GL P+ VTY+I+I+ F   G M+ A+ +   M A G  P+   F++L+
Sbjct: 484 TAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G     E +KV+EL+  M  +N
Sbjct: 544 QGYSTKGEINKVLELIREMITKN 566



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 138/259 (53%), Gaps = 6/259 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVT 57
           + EA+ LLD +    VR +A  Y+T++   C  G  DRA  L  +M +     C  N V+
Sbjct: 61  LGEATSLLDAL--PSVR-DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  L+   C  +  ++++ L   M S G+R  VVTY TL  GL +  +V+ A++L  EM 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S +      Y++ + G CK+G   +  ++F  +     E  +  Y+ LID LCK+GK +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +   + R GL PNVVTYN++I+  C +G + +A  +   M  KGVAP+ VT+NTL+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 238 LGCIRNNETSKVVELLHRM 256
            G     E  + + LL  M
Sbjct: 298 KGLSDVLEMDEAMWLLEEM 316



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 134/257 (52%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  LL  M   GVR +   Y TLI G C   E+D+A EL   M  +G   NVV Y++L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + GYCK+   E+   ++ EM  KGI P VV Y  L   L ++ + + A  + D M    +
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  I+ +CK G + EA  + + +        +  Y+ LI GL  + +++ A  
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 182 LFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L + + R    + PNVVT+N +I G C+ G+M +A  +   ME  G   N VT+N L+ G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 240 CIRNNETSKVVELLHRM 256
            +R ++  K +EL+  M
Sbjct: 372 LLRVHKVRKAMELMDEM 388



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 11/221 (4%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM---LSKGIRPTVVTYNTLFHGLFE 102
           +D    + + V+YNT++   C+    + +  L   M        RP  V+Y  L   L  
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127

Query: 103 IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
               + A+ L   M+ + V A+  TY T I GLC    + +A EL   +    CE GIE 
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM----CESGIEP 183

Query: 163 ----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               YS L+ G CK G+ E   ++F  +   G+ P+VV Y  +I   C  G+  KAH + 
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             M  +G+ PN VT+N L+    +     + + +L +M E+
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK 284



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 4/187 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M  RG+ P  F Y  L+   C  G ++RAR LF  MD N  + +VV Y+T
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYST 471

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK  D++ +  L   ++ +G+ P  VTY+ + +   +   +E A  +  +M  S 
Sbjct: 472 MIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + + +++ I G    G I +  EL R +      L  +  S L   L    +     
Sbjct: 532 FLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE---GK 588

Query: 181 ELFQSLP 187
            L QSLP
Sbjct: 589 ALLQSLP 595


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           ++EAS++ + M+Q+G+RP+A +Y+TLIDGFC  G +D A                     
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366

Query: 40  --RELFVSMDIN------------GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
               LF+    +            G   + +TYN LINGYC+  + +++  L+ EML+ G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I+PT  TY +L H L + ++++ A  LF ++    V  +   +N  IDG C N  +  A 
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAF 486

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EL + +  +K       ++ ++ G C+ GK+E A ELF  + R G+ P+ +++N +I G+
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY 546

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              G +  A  +  +M   G  P  +T+N L+ G  +N E     ELL  M
Sbjct: 547 SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 139/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L  M ++ + P++F Y +LI G C  G ++ A ++F  M   G   + V YNT
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C   +++ +     EML KGI PT+ TYN+L H LF   + + A  +  E+Q   
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TYN  I+G C+     +A  L   +     +   + Y+ L+  L K  +++ A 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G++P+V+ +N +I G C++  +  A +L  DM+   V P+ VTFNT+M G 
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  +  EL   M  R
Sbjct: 512 CREGKVEEARELFDEMKRR 530



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 122/241 (50%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           ++ V+  LI   C     D A E F +M   G +  + T N+L++ + K    E +  LY
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
           +EM    I+ +V T+N + + L +  +++ A      M+ S V     TYNT + G C +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G +  A  +  T++  K E     Y  LI G+CK G+LE A ++F+ + + GL P+ V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I GFCN G +D A     +M  KG++P   T+N+L+        T +   ++  + E
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 259 R 259
           +
Sbjct: 390 K 390



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 1/253 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA      M ++GV P     ++L+  F      + A  L+  M       +V T+N +
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 227

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   ++++ +    M + G++P +VTYNT+ HG     +VE A  +   M+   +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             ++ TY + I G+CK G + EA+++F  +           Y+ LIDG C  G L+ A  
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               + + G+ P + TYN +IH    + + D+A  +  +++ KG++P+ +T+N L+ G  
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYC 407

Query: 242 RNNETSKVVELLH 254
           R     K   LLH
Sbjct: 408 RCANAKKAF-LLH 419



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 35/282 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +  ++ + + ++ +I+  C  G++ +A++    M+ +G   N+VTYNT+++GYC +  
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           VE +  + + M  + I P   TY +L  G+ +  ++E A K+F+EM    +      YNT
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 131 FIDGLCKNGYIVEAA-----------------------ELFRTLRVLKCELGIE------ 161
            IDG C  G +  A+                        LF   R  + E  I+      
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 162 ------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                  Y+ LI+G C+    + A+ L   +   G+ P   TY  ++H      +M +A 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           DLF  + ++GV P+ + FN L+ G   N+      ELL  MD
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMD 493



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 78/134 (58%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M +  V P+   ++T++ G C  G+++ ARELF  M   G   + +++NTLI+
Sbjct: 485 AFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLIS 544

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY +  D++++  + +EML  G  PTV+TYN L  GL +  + + A +L  EM    +  
Sbjct: 545 GYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604

Query: 124 ETSTYNTFIDGLCK 137
           + +TY T I+G+ K
Sbjct: 605 DDTTYFTLIEGIAK 618



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 60/104 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D M +RG++P+   ++TLI G+   G+I  A  +   M   G    V+TYN 
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
           L+ G CK ++ + +  L  EM+SKG+ P   TY TL  G+ +++
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 35/76 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+ + M+  G  P    Y+ L+ G C   E D A EL   M   G   +  TY T
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 61  LINGYCKTKDVEESLN 76
           LI G  K    +E+ N
Sbjct: 612 LIEGIAKVNIPDENKN 627


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           ++EAS++ + M+Q+G+RP+A +Y+TLIDGFC  G +D A                     
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366

Query: 40  --RELFVSMDIN------------GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
               LF+    +            G   + +TYN LINGYC+  + +++  L+ EML+ G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I+PT  TY +L H L + ++++ A  LF ++    V  +   +N  IDG C N  +  A 
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAF 486

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EL + +  +K       ++ ++ G C+ GK+E A ELF  + R G+ P+ +++N +I G+
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY 546

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              G +  A  +  +M   G  P  +T+N L+ G  +N E     ELL  M
Sbjct: 547 SRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597



 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 138/259 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L  M ++ + P++F Y +LI G C  G ++ A ++F  M   G   + V YNT
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C   +++ +     EML KGI PT+ TYN+L H LF   + + A  +  E+Q   
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TYN  I+G C+     +A  L   +     +   + Y+ L+  L K  +++ A 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +   G++P+ + +N +I G C++  +  A +L  DM+   V P+ VTFNT+M G 
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  +  EL   M  R
Sbjct: 512 CREGKVEEARELFDEMKRR 530



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 126/257 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A   +  M   GV+PN   Y+T++ G+C +G ++ A  +  +M       +  TY +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +EE+  ++ EM+ KG+RP+ V YNTL  G      ++ A    DEM    
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++   STYN+ I  L       EA  + + ++          Y+ LI+G C+    + A+
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+ P   TY  ++H      +M +A DLF  + ++GV P+ + FN L+ G 
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGH 476

Query: 241 IRNNETSKVVELLHRMD 257
             N+      ELL  MD
Sbjct: 477 CSNSNVKGAFELLKDMD 493



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 122/241 (50%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           ++ V+  LI   C     D A E F +M   G +  + T N+L++ + K    E +  LY
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
           +EM    I+ +V T+N + + L +  +++ A      M+ S V     TYNT + G C +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G +  A  +  T++  K E     Y  LI G+CK G+LE A ++F+ + + GL P+ V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I GFCN G +D A     +M  KG++P   T+N+L+        T +   ++  + E
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 259 R 259
           +
Sbjct: 390 K 390



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 1/253 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA      M ++GV P     ++L+  F      + A  L+  M       +V T+N +
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 227

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   ++++ +    M + G++P +VTYNT+ HG     +VE A  +   M+   +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             ++ TY + I G+CK G + EA+++F  +           Y+ LIDG C  G L+ A  
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               + + G+ P + TYN +IH    + + D+A  +  +++ KG++P+ +T+N L+ G  
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYC 407

Query: 242 RNNETSKVVELLH 254
           R     K   LLH
Sbjct: 408 RCANAKKAF-LLH 419



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 78/134 (58%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M +  V P+   ++T++ G C  G+++ ARELF  M   G   + +++NTLI+
Sbjct: 485 AFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLIS 544

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY +  D++++  + +EML  G  PTV+TYN L  GL +  + + A +L  EM    +  
Sbjct: 545 GYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604

Query: 124 ETSTYNTFIDGLCK 137
           + +TY T I+G+ K
Sbjct: 605 DDTTYFTLIEGIAK 618



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 60/104 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D M +RG++P+   ++TLI G+   G+I  A  +   M   G    V+TYN 
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
           L+ G CK ++ + +  L  EM+SKG+ P   TY TL  G+ +++
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score = 43.5 bits (101), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 35/76 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+ + M+  G  P    Y+ L+ G C   E D A EL   M   G   +  TY T
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 61  LINGYCKTKDVEESLN 76
           LI G  K    +E+ N
Sbjct: 612 LIEGIAKVNIPDENKN 627


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 139/258 (53%), Gaps = 7/258 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  L+  M+++G+ P   +Y+TLI G C   ++  A  +F  M  +G   N+ TYN L+
Sbjct: 204 RAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLM 263

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCKT +V+++L+LY  ML  G++P VVT+  L   L ++ ++  A + F +M    V 
Sbjct: 264 DGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVV 323

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                +N+ IDG  K G   EA +L   +   K    +  YS LI   C++G +E A ++
Sbjct: 324 PNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDI 383

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL------DMEAKGVAPNCVTFNTL 236
            + + + G+  N V YN +I G+C +G M+KA ++F       DM   G+ P+ + +  +
Sbjct: 384 LKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVM 443

Query: 237 MLGCIRNNETSKVVELLH 254
           + G +     + V+ +LH
Sbjct: 444 LQGHLNAKHMADVM-MLH 460



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+    ++ G  P     + L++G       D   EL+ +M        VVTYN 
Sbjct: 135 VDEALRV---YLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNV 191

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  C+  DV  + +L SEM+ KGI PTVV Y TL HGL    ++  A  +F +M+ S 
Sbjct: 192 LVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSG 251

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  +DG CK   + +A  L++ +     +  +  +  LID LCK+ +L  A 
Sbjct: 252 VFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAAR 311

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  + + G++PNVV +N +I G+   G   +A DL L+ME   ++P+  T++ L+   
Sbjct: 312 RFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNA 371

Query: 241 IRNNETSKVVELLHRMDE 258
            R     +  ++L RM++
Sbjct: 372 CRLGTVEEADDILKRMEK 389



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 6/243 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M   GV PN + Y+ L+DG+C T  + +A  L+  M  +G   NVVT+  LI
Sbjct: 239 EAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILI 298

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK +++  +   + +M   G+ P VV +N+L  G  +      A  L  EM+   ++
Sbjct: 299 DALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKIS 358

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  I   C+ G + EA ++ + +           Y+ LIDG CK G +E A E+
Sbjct: 359 PDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEI 418

Query: 183 FQS------LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           F++      + R GL P+ + Y +M+ G  N   M     L  DM   G+ PN VT   +
Sbjct: 419 FKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVV 478

Query: 237 MLG 239
             G
Sbjct: 479 RRG 481



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 11/172 (6%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA+ LL  M +  + P+ F YS LI   C  G ++ A ++   M+  G   N V YN+L
Sbjct: 343 SEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSL 402

Query: 62  INGYCKTKDVEESLNLY------SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           I+GYCK  ++E++L ++      S+M   G+RP  + Y  +  G      +   + L  +
Sbjct: 403 IDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHAD 462

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-----RVLKCELGIEA 162
           M    +     T      G   NGY+  A    R L     R L+ +  +EA
Sbjct: 463 MIKMGIVPNEVTSQVVRRGYQDNGYLKSALWCSRDLTESCPRTLESQSPVEA 514



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 6/105 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS------MDINGCMHN 54
           ++EA  +L  M + GV  N+ VY++LIDG+C  G +++A E+F +      M  NG   +
Sbjct: 377 VEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPD 436

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG 99
            + Y  ++ G+   K + + + L+++M+  GI P  VT   +  G
Sbjct: 437 ALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRG 481


>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 376

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ +L++ + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L     + G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALMIWARI 330



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K + P  +T
Sbjct: 325 MIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVPTKIT 376



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 133/254 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 66/124 (53%), Gaps = 1/124 (0%)

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C++G I  A  +++ +   K       Y+ +++G  ++ K++  +EL++ +   G   +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
            ++NIM+ G  ++G++D+   ++  M+  G   + +T+  L+ G  +N    K + +L  
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 256 MDER 259
            +++
Sbjct: 120 AEQK 123


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 137/257 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M+  GV PN F Y+T+I+GFC  G +  A ++       G + +  TY++LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C   D+  ++ ++ E + KG + +++ YNTL  GL +   V  AL+L  +M     +
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ++GLCK G + +A  +        C   I  ++ LIDG CK   ++ A E+
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++   G+ P+V+TYN +++G C   ++D   D F  M  KG  PN +T+N L+    +
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543

Query: 243 NNETSKVVELLHRMDER 259
           + + S+ +EL   M  R
Sbjct: 544 DRKVSEAMELFKEMKTR 560



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+RLL+ ++  G+ P+   Y+TLI GFC   ++  A      M  +G   N  TYNT
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK   ++ +  +  + + KG  P   TY++L +GL     +  A+ +F E     
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  YNT + GL K G +++A +L + +    C   I  Y+ +++GLCK+G L  A 
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +       G +P++ T+N +I G+C    MDKA ++   M + G+ P+ +T+NTL+ G 
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +   VV+    M E+
Sbjct: 507 CKARKLDNVVDTFKAMLEK 525



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 129/233 (55%), Gaps = 1/233 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ +L+  I +G  P+ F ++TLIDG+C    +D+A E+  +M  +G   +V+TYNT
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK + ++  ++ +  ML KG  P ++TYN L     +  +V  A++LF EM+   
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  +  T  T I GLC NG + +A ELF T+ +  K       ++ +I+  C+   +  A
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMA 621

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            +LF  +      P+  TY +MI  +C  G +D AH   L+  +KG+ P+  T
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTT 674



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E+ +L   +++RGV PN F ++  I G C  G ID A  L  S+   G   +V++YNT
Sbjct: 232 VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNT 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK   + E+     +M++ G+ P   TYNT+ +G  +   +++A K+  +     
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY++ I+GLC +G +  A  +F        +  I  Y+ L+ GL K G +  A 
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   G  P++ TYN++++G C  G +  A+ +  D  AKG  P+  TFNTL+ G 
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGY 471

Query: 241 IRNNETSKVVELLHRM 256
            +     K +E+L  M
Sbjct: 472 CKQRNMDKAIEILDTM 487



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 132/257 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++   M   G+ P+ + ++  +  FC+TG    A  L  +M   GC  N V+Y  +I
Sbjct: 129 QAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVI 188

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K     E+ +L+ EML +GI P ++T+N L H L +   V+ + KLF ++    V 
Sbjct: 189 SGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVC 248

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N FI GLC+ G I EAA L  ++        + +Y+ LI G CK  KL  A   
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECY 308

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ PN  TYN +I+GFC  G M  A  +  D   KG  P+  T+++L+ G   
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368

Query: 243 NNETSKVVELLHRMDER 259
           + + ++ + + +   E+
Sbjct: 369 DGDMNRAMAVFYEAMEK 385



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 138/257 (53%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  +    +++G + +  +Y+TL+ G    G + +A +L   M  +GC  ++ TYN 
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK   + ++  + ++ ++KG  P + T+NTL  G  +   ++ A+++ D M    
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT ++GLCK   +    + F+ +    C   I  Y+ LI+  CK  K+  A 
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLG 239
           ELF+ +   GL P++VT   +I G C++G++DKA++LF+ +E +   + +   FN ++  
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611

Query: 240 CIRNNETSKVVELLHRM 256
                  S   +L H+M
Sbjct: 612 FCEKLNVSMAEKLFHKM 628



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 116/229 (50%), Gaps = 1/229 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +LD M+  G+ P+   Y+TL++G C   ++D   + F +M   GC  N++TYN 
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
           LI  +CK + V E++ L+ EM ++G+ P +VT  TL  GL    +++ A +LF  ++   
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             +  T+ +N  I+  C+   +  A +LF  +    C      Y  +ID  CK G ++ A
Sbjct: 597 KFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
                     GL+P+  T   +++  C   ++ +A  +   M   G+ P
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 114/239 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M      P+   Y+ +++     G   +A ++++ M   G   +V T+  
Sbjct: 92  VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +  +C T     +L L + M  +G     V+Y  +  G ++ +    A  LFDEM    
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  I  LCK G + E+ +LF  +        +  ++  I GLC+ G ++ A 
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L +S+   GL P+V++YN +I GFC   ++ +A      M   GV PN  T+NT++ G
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 3/246 (1%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYNTLINGYCKTKD 70
           + G +     Y  +I+   L G+ +   ++   M  +++  M   V Y  ++  Y +   
Sbjct: 33  EDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGV-YIGIMRDYGRKGK 91

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E++N++  M      P+V +YN + + L E      A K++  M+   +  +  T+  
Sbjct: 92  VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +   C  G    A  L   +    CE    +Y  +I G  K      A+ LF  + + G
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+++T+N +IH  C  G + ++  LF  +  +GV PN  TFN  + G  R     +  
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271

Query: 251 ELLHRM 256
            LL  +
Sbjct: 272 RLLESI 277



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 88/191 (46%), Gaps = 5/191 (2%)

Query: 70  DVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETST 127
           D   +L +++++ ++ G + T+ TY  +   L    + E    +  EM+ + D       
Sbjct: 19  DPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGV 78

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y   +    + G + EA  +F  +    CE  +++Y+ +++ L + G    A +++  + 
Sbjct: 79  YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
            +G+ P+V T+ I +  FC  G+   A  L  +M  +G   N V++  ++ G  + N   
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ- 197

Query: 248 KVVELLHRMDE 258
             +E  H  DE
Sbjct: 198 --IEAYHLFDE 206



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 41/206 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD------------- 47
           + EA  L   M  RG+ P+     TLI G C  GE+D+A ELFV+++             
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606

Query: 48  --ING---------------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
             IN                      C  +  TY  +I+ YCKT +++ +     E +SK
Sbjct: 607 IMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+ P+  T   + + L   H++  A+ + + M  + +  E    N+  +   K    V A
Sbjct: 667 GLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE--EVNSIFEADKKE---VAA 721

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGL 170
            ++     + K  +   +Y  L DG+
Sbjct: 722 PKIVVEYLLKKSHITYYSYELLYDGI 747



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 8/159 (5%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L   M      P+ + Y  +ID +C TG ID A    +     G + +  T   ++N
Sbjct: 621 AEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLN 680

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE-HALKLFDEMQHSDVA 122
             C T  + E++ + + M+  GI P  V      + +FE  + E  A K+  E       
Sbjct: 681 CLCVTHRLSEAVVIINLMVQNGIVPEEV------NSIFEADKKEVAAPKIVVEYLLKKSH 734

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
               +Y    DG+ +N  +VEA  L   +   K +L +E
Sbjct: 735 ITYYSYELLYDGI-RNRKVVEARPLLYKVAYQKAKLQLE 772


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 142/257 (55%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L+  M+     P+   ++T+I   C  G +DRA ++   M  NGC  ++VTYN++
Sbjct: 389 EHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSI 448

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C  + +++++ L S + S G +P +VT+NTL  GL  + + E A +L   M HSD 
Sbjct: 449 IDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDC 508

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             + +T+NT I  LC+ G +++A E  + +    C      Y+ ++D L K GK + A +
Sbjct: 509 PPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALK 568

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +      P+++TYN +I      G+M++A DL   M + G++P+ +T+ +L  G  
Sbjct: 569 LLSGM--TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGIC 626

Query: 242 RNNETSKVVELLHRMDE 258
           R + T + + +L R+ +
Sbjct: 627 REDGTDRAIRMLCRLQD 643



 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 130/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + D M+ RG  P+   YS L+D  C      +A  L   M   GC  ++VTYN LI
Sbjct: 180 DALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLI 239

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C   DV+E+LN+ S++ S G +P  VTY  +   L    + +   +LF EM  +  A
Sbjct: 240 NAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCA 299

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+NT +  LC+ G +  A ++   +    C   I  YS ++DGLC +G+++ A EL
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L   G  P+ + Y  ++ G C+  Q + A +L  +M      P+ VTFNT++    +
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419

Query: 243 NNETSKVVELLHRMDE 258
                + ++++ +M E
Sbjct: 420 KGLVDRAIKVVEQMSE 435



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 131/256 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   L   M      P+   ++T++   C  G +DRA ++   M  +GC+ ++VTY++++
Sbjct: 285 EVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSIL 344

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C    V++++ L S + S G +P  + Y T+  GL  I Q EHA +L  EM  SD  
Sbjct: 345 DGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCP 404

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+NT I  LC+ G +  A ++   +    C   I  Y+ +IDGLC    ++ A EL
Sbjct: 405 PDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMEL 464

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             +L   G  P++VT+N ++ G C+  + + A  L ++M      P+  TFNT++    +
Sbjct: 465 LSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQ 524

Query: 243 NNETSKVVELLHRMDE 258
                + +E L  M E
Sbjct: 525 KGLLLQAIETLKIMAE 540



 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +++D M + G  P+   YS+++DG C  G +D A EL   +   GC  + + Y T
Sbjct: 318 VDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 377

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G C  +  E +  L +EM+     P  VT+NT+   L +   V+ A+K+ ++M  + 
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN+ IDGLC    I +A EL   L+   C+  I  ++ L+ GLC + + E A 
Sbjct: 438 CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAE 497

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L  ++      P+  T+N +I   C  G + +A +    M   G  PN  T+N ++   
Sbjct: 498 QLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDAL 557

Query: 241 IRNNETSKVVELLHRM 256
           ++  +T + ++LL  M
Sbjct: 558 LKAGKTQEALKLLSGM 573



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 127/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LLD M  +G  P+   Y+ LI+  C  G++D A  +   +  +GC  + VTY  ++
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C ++  +E   L++EM S    P  VT+NT+   L +   V+ A+K+ D M      
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY++ +DGLC  G + +A EL   L+   C+    AY+ ++ GLC I + E A EL
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +      P+ VT+N +I   C  G +D+A  +   M   G  P+ VT+N+++ G   
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454

Query: 243 NNETSKVVELLHRM 256
                  +ELL  +
Sbjct: 455 ERCIDDAMELLSNL 468



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 6/233 (2%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           LI   C  G +  A  +F ++   G    VVTYNT++NGYC+   +E++  L S M    
Sbjct: 104 LIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGM---P 157

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P   T+N L   L    +V  AL +FD+M H   +    TY+  +D  CK     +A 
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L   +R   CE  I  Y+ LI+ +C  G ++ A  +   LP  G  P+ VTY  ++   
Sbjct: 218 VLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSL 277

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C   +  +  +LF +M +   AP+ VTFNT++    +     + ++++  M E
Sbjct: 278 CGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSE 330



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 2/225 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +L+  M+     P+A  ++T+I   C  G + +A E    M  NGC+ N  TYN +
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIV 553

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   K    +E+L L S M +    P ++TYNT+   + +  ++E AL L   M  + +
Sbjct: 554 VDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGL 611

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +T TY +   G+C+      A  +   L+ +        Y+ ++ G C+  + + A +
Sbjct: 612 SPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAID 671

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            F  +   G MP+  TY I++     +  +D+A  L +++ + GV
Sbjct: 672 CFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  LL +M+  G+ P+   Y +L  G C     DRA  +   +   G   +   YN 
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYND 655

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           ++ G+C+    + +++ ++ M+S G  P   TY  L   L
Sbjct: 656 ILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 137/257 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M+  GV PN F Y+T+I+GFC  G +  A ++       G + +  TY++LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C   D+  ++ ++ E + KG + +++ YNTL  GL +   V  AL+L  +M     +
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  ++GLCK G + +A  +        C   I  ++ LIDG CK   ++ A E+
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++   G+ P+V+TYN +++G C   ++D   D F  M  KG  PN +T+N L+    +
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK 543

Query: 243 NNETSKVVELLHRMDER 259
           + + S+ +EL   M  R
Sbjct: 544 DRKVSEAMELFKEMKTR 560



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+RLL+ ++  G+ P+   Y+TLI GFC   ++  A      M  +G   N  TYNT
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK   ++ +  +  + + KG  P   TY++L +GL     +  A+ +F E     
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  YNT + GL K G +++A +L + +    C   I  Y+ +++GLCK+G L  A 
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +       G +P++ T+N +I G+C    MDKA ++   M + G+ P+ +T+NTL+ G 
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +   VV+    M E+
Sbjct: 507 CKARKLDNVVDTFKAMLEK 525



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E+ +L   +++RGV PN F ++  I G C  G ID A  L  S+   G   +V++YNT
Sbjct: 232 VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNT 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK   + E+     +M++ G+ P   TYNT+ +G  +   +++A K+  +     
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY++ I+GLC +G +  A  +F        +  I  Y+ L+ GL K G +  A 
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   G  P++ TYN++++G C  G +  A+ +  D  AKG  P+  TFNTL+ G 
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGY 471

Query: 241 IRNNETSKVVELLHRM 256
            +     K +E+L  M
Sbjct: 472 CKQRNMDKAIEILDTM 487



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 128/233 (54%), Gaps = 1/233 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ +L+  I +G  P+ F ++TLIDG+C    +D+A E+  +M  +G   +V+TYNT
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK + ++  ++ +  ML KG  P ++TYN L     +  +V  A++LF EM+   
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  +  T  T I GLC NG + +A ELF T+ +  K       ++ +I+  C    +  A
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMA 621

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            +LF  +      P+  TY +MI  +C  G +D AH   L+  +KG+ P+  T
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTT 674



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 132/257 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++   M   G+ P+ + ++  +  FC+TG    A  L  +M   GC  N V+Y  +I
Sbjct: 129 QAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVI 188

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K     E+ +L+ EML +GI P ++T+N L H L +   V+ + KLF ++    V 
Sbjct: 189 SGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVC 248

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N FI GLC+ G I EAA L  ++        + +Y+ LI G CK  KL  A   
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECY 308

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ PN  TYN +I+GFC  G M  A  +  D   KG  P+  T+++L+ G   
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368

Query: 243 NNETSKVVELLHRMDER 259
           + + ++ + + +   E+
Sbjct: 369 DGDMNRAMAVFYEAMEK 385



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 138/257 (53%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  +    +++G + +  +Y+TL+ G    G + +A +L   M  +GC  ++ TYN 
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK   + ++  + ++ ++KG  P + T+NTL  G  +   ++ A+++ D M    
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT ++GLCK   +    + F+ +    C   I  Y+ LI+  CK  K+  A 
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLG 239
           ELF+ +   GL P++VT   +I G C++G++DKA++LF+ +E +   + +   FN ++  
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611

Query: 240 CIRNNETSKVVELLHRM 256
                  S   +L H+M
Sbjct: 612 FCXKLNVSMAEKLFHKM 628



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 115/229 (50%), Gaps = 1/229 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +LD M+  G+ P+   Y+TL++G C   ++D   + F +M   GC  N++TYN 
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
           LI  +CK + V E++ L+ EM ++G+ P +VT  TL  GL    +++ A +LF  ++   
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             +  T+ +N  I+  C    +  A +LF  +    C      Y  +ID  CK G ++ A
Sbjct: 597 KFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
                     GL+P+  T   +++  C   ++ +A  +   M   G+ P
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 114/239 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M      P+   Y+ +++     G   +A ++++ M   G   +V T+  
Sbjct: 92  VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +  +C T     +L L + M  +G     V+Y  +  G ++ +    A  LFDEM    
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  I  LCK G + E+ +LF  +        +  ++  I GLC+ G ++ A 
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L +S+   GL P+V++YN +I GFC   ++ +A      M   GV PN  T+NT++ G
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 3/246 (1%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYNTLINGYCKTKD 70
           + G +     Y  +I+   L G+ +   ++   M  +++  M   V Y  ++  Y +   
Sbjct: 33  EDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGV-YIGIMRDYGRKGK 91

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E++N++  M      P+V +YN + + L E      A K++  M+   +  +  T+  
Sbjct: 92  VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +   C  G    A  L   +    CE    +Y  +I G  K      A+ LF  + + G
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+++T+N +IH  C  G + ++  LF  +  +GV PN  TFN  + G  R     +  
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271

Query: 251 ELLHRM 256
            LL  +
Sbjct: 272 RLLESI 277



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 88/191 (46%), Gaps = 5/191 (2%)

Query: 70  DVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETST 127
           D   +L +++++ ++ G + T+ TY  +   L    + E    +  EM+ + D       
Sbjct: 19  DPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGV 78

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y   +    + G + EA  +F  +    CE  +++Y+ +++ L + G    A +++  + 
Sbjct: 79  YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
            +G+ P+V T+ I +  FC  G+   A  L  +M  +G   N V++  ++ G  + N   
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ- 197

Query: 248 KVVELLHRMDE 258
             +E  H  DE
Sbjct: 198 --IEAYHLFDE 206



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 36/160 (22%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD------------- 47
           + EA  L   M  RG+ P+     TLI G C  GE+D+A ELFV+++             
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606

Query: 48  --ING---------------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
             IN                      C  +  TY  +I+ YCKT +++ +     E +SK
Sbjct: 607 IMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           G+ P+  T   + + L   H++  A+ + + M  + +  E
Sbjct: 667 GLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L   M      P+ + Y  +ID +C TG ID A    +     G + +  T   ++N
Sbjct: 621 AEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLN 680

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG 99
             C T  + E++ + + M+  GI P  V  N++F  
Sbjct: 681 CLCVTHRLSEAVVIINLMVQNGIVPEEV--NSIFEA 714


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 138/258 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + AS++   M  + ++P+ + Y++ I   C    I+ A  +   +  +G + N VTYN L
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C   D++++     EM+++GI  +V TYN L H LF   ++E A  +  EM+   V
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV 388

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  I+G C+ G   +A  LF  +        +E Y+ LID   K  ++  A E
Sbjct: 389 EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F+   + G++P+++ +N +I G C +G +D+A  L  +M+   V P+ VTFNTLM G  
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYC 508

Query: 242 RNNETSKVVELLHRMDER 259
           R  +  +  +LL  M ER
Sbjct: 509 RERKVEEAKKLLDEMKER 526



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EAS +L  +++ G+ PNA  Y+ LIDG C  G++D+A      M   G + +V TYN 
Sbjct: 303 IEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+     K +EE+ ++  EM  KG+ P VVTYN   +G       + AL LFDEM   +
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + ID   K   + EA E F+          I  ++ LIDG C  G ++ A+
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +    ++P+ VT+N ++ G+C + ++++A  L  +M+ +G+ P+ +++NTL+ G 
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542

Query: 241 IRNNETSKVVELLHRM 256
            +  +    +E+   M
Sbjct: 543 SKRGDMKDALEVFDEM 558



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 133/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    D M+ RG+  + F Y+ LI    L   I+ A ++   M   G   +VVTYN 
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            INGYC+  + +++L+L+ EM+ K IRPTV TY +L     + +++  A + F +     
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +N  IDG C NG I  A +L + +   K       ++ L+ G C+  K+E A 
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ P+ ++YN +I G+   G M  A ++F +M + G  P  +T+N L+ G 
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGY 577

Query: 241 IRNNETSKVVELLHRMDER 259
            +  E     ELL  M  +
Sbjct: 578 SKIGEADHAEELLREMQSK 596



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 134/261 (51%), Gaps = 4/261 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA   L+LM +  + P     ++L+       +I  A  ++  M       ++VT+N +
Sbjct: 164 DEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIM 223

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  C+    +++ +    M   G++P VVTYNT+ +G     + E A K+F  M+  ++
Sbjct: 224 INILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNL 283

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETA 179
             +  TYN+FI  LCK   I EA+ +    ++L+  L   A  Y+ LIDG C  G L+ A
Sbjct: 284 KPDCYTYNSFISRLCKERRIEEASGVL--CKLLESGLVPNAVTYNALIDGCCNKGDLDKA 341

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +     +   G++ +V TYN++IH    + ++++A D+  +M  KGV P+ VT+N  + G
Sbjct: 342 FAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQING 401

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R     K + L   M E+N
Sbjct: 402 YCRCGNAKKALSLFDEMVEKN 422



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 105/202 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M+++ +RP    Y++LID F     +  A E F      G + +++ +N LI
Sbjct: 410 KALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALI 469

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C   +++ +  L  EM +  + P  VT+NTL  G     +VE A KL DEM+   + 
Sbjct: 470 DGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIK 529

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YNT I G  K G + +A E+F  +  L  +  +  Y+ LI G  KIG+ + A EL
Sbjct: 530 PDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEEL 589

Query: 183 FQSLPRVGLMPNVVTYNIMIHG 204
            + +   G+ P+  TY  +I  
Sbjct: 590 LREMQSKGITPDDSTYLYVIEA 611



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 84/143 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LL  M    V P+   ++TL+ G+C   +++ A++L   M   G   + ++YNT
Sbjct: 478 IDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNT 537

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K  D++++L ++ EMLS G  PT++TYN L  G  +I + +HA +L  EMQ   
Sbjct: 538 LISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKG 597

Query: 121 VAAETSTYNTFIDGLCKNGYIVE 143
           +  + STY   I+ +  N  +VE
Sbjct: 598 ITPDDSTYLYVIEAMKTNDDLVE 620



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 103/205 (50%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
            + ++ L++ YC+ +  +E+L   + M    I P   T N+L   L ++++++ A  +++
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM   ++ +   T+N  I+ LC+ G   +A +    + V   +  +  Y+ +I+G C  G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           K E A ++F+++    L P+  TYN  I   C + ++++A  +   +   G+ PN VT+N
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
            L+ GC    +  K       M  R
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNR 351



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 80/149 (53%)

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T + ++ L     +  + + AL+  + M+ +++  +T T N+ +  L K   I  A  ++
Sbjct: 146 TTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVY 205

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +  +  +  I  ++ +I+ LC+ GK + A +    +   G+ PNVVTYN +I+G+C  
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           G+ + A  +F  M+ K + P+C T+N+ +
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFI 294


>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 418

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 131/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+ + + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK + V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 126/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++  V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKN  +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V ++  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK  +++
Sbjct: 199 ASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 VAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +  +  +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C + ++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|255660958|gb|ACU25648.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 348

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ +L + + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L     + G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 115/204 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHG 204
            ++  + R GL P++++YNI + G
Sbjct: 325 VIWARILRNGLEPDIISYNITLKG 348


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A ELF  M   G + N VT+ T
Sbjct: 187 LDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL     ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +     +L    Y+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+ +TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 132/234 (56%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + + + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLC+ G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P+ +T+  ++
Sbjct: 335 KRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMII 388



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV++NTL+NGY +  D++E 
Sbjct: 131 GYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T IDG
Sbjct: 191 FRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLC+ G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +        ++L 
Sbjct: 311 KITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + ++++ +   G+RP+VV++NTL +G   +  ++   +L   M 
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGXCKEGDLETAFEHRKRMIQEN 341


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 139/263 (52%), Gaps = 6/263 (2%)

Query: 1   MDEA-SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA + LL  + +RG  P+   YST+IDG C  G +  A ++F  M    C    +TYN
Sbjct: 235 LDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYN 291

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +LI GYC+  D++E++ L  +M+     P V+TY TL     ++ +++ A +LF +M  +
Sbjct: 292 SLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVAN 351

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            ++ +  T+ + +DGLC  G + +A EL   +    C   I  Y+C++DG CK  ++  A
Sbjct: 352 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKA 411

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLML 238
            EL       G +PN VTYNI++ G C  G+ D+A      + ++ G  P  V    ++L
Sbjct: 412 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 471

Query: 239 GCI-RNNETSKVVELLHRMDERN 260
             + R+  T   V+    M +R 
Sbjct: 472 DALCRDGRTDDAVQFYEEMIQRG 494



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 9/259 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M  RG+ P   +++ +I G C  G +  A  ++  M+ +    + +TY  
Sbjct: 96  LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTK 154

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K   + +++ +  EM+S    P   T   +   L    +V+ A +L +EM H  
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFR---TLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           +AA   TY+  +DGLCK   + EA  L     T R    +  I  YS +IDGLCK G+L 
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPD--IVTYSTVIDGLCKAGRLR 272

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A ++F+ +      P  +TYN +I G+C  G MD+A  L   M     AP+ +T+ TLM
Sbjct: 273 DAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLM 329

Query: 238 LGCIRNNETSKVVELLHRM 256
               +        EL  +M
Sbjct: 330 SAFCKMGRLDDAYELFQQM 348



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 2/219 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+   + P+   +++L+DG C  G ++ A EL   +   GC   + TYN 
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYCK+  V ++  L ++  S+G  P  VTYN L  G     + + AL+  D++    
Sbjct: 398 VVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 457

Query: 121 VAAETST--YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
               TS   Y   +D LC++G   +A + +  +           ++ ++  LCK  + + 
Sbjct: 458 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 517

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           A EL + + + G  P   T + ++  +C  G + KA +L
Sbjct: 518 AHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 6/258 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D M + G   N   Y  LI   C    +D A  L + M   G     + +N +I 
Sbjct: 65  AMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIG 123

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C+   +  +L +Y +M +    P  +TY  L HGL +  ++  A+++  EM  +    
Sbjct: 124 GLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP 182

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           + +T    +  LC    + +A EL   +           YS L+DGLCK  +L+ A  L 
Sbjct: 183 DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL 242

Query: 184 -QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R G  P++VTY+ +I G C  G++  A D+F +M     AP  +T+N+L+ G  R
Sbjct: 243 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCR 299

Query: 243 NNETSKVVELLHRMDERN 260
             +  + + LL +M + N
Sbjct: 300 AGDMDEAIRLLGKMVDDN 317



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 37/190 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  LL+ + +RG  P  + Y+ ++DG+C + ++ +A EL       G + N VTYN 
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNI 432

Query: 61  LINGYCKTKDVEESLN-------------------------------------LYSEMLS 83
           L+ G C+    +++L                                       Y EM+ 
Sbjct: 433 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 492

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           +G  P   T+ T+   L + HQ + A +L +EM          T +  +   C+ G I +
Sbjct: 493 RGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQK 552

Query: 144 AAELFRTLRV 153
           A EL   LR+
Sbjct: 553 ADELASELRL 562



 Score = 43.9 bits (102), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LC      TA  LF  +  +G + +   YN +IH  C    +D+A  L LDM+++G+ P 
Sbjct: 56  LCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPG 114

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +  N ++ G  R       + +  +M++
Sbjct: 115 TLLHNVVIGGLCRAGRLRHALGVYRQMND 143


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 4/234 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL  +M   GV P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLET 178
           +  +  TY T IDG CK G +  A E  +  R++K  +  +  AY+ LI GLC+ G+   
Sbjct: 307 LKPDKITYTTLIDGXCKEGDLETAFEYRK--RMIKENIRXDDVAYTALISGLCQEGRSVD 364

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           A ++ + +  VGL P + TY ++I+  C  G +     L  +M+  G  PN VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 129/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GEI  A+ +F S+   G   +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L S M + G+ P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E++R +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 133/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L   M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    +  
Sbjct: 215 GLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++    + 
Sbjct: 335 KRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKK 394

Query: 244 NETSKVVELLHRM 256
            +     +LL  M
Sbjct: 395 GDVWTGSKLLKEM 407



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 116/203 (57%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL +G  +I  ++   +L   MQ
Sbjct: 139 FNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AHDL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGXCKEGDLETAFEYRKRMIKEN 341



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   +I    K K  +    
Sbjct: 63  RSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++       +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 KIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 131/238 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +  +LLD M   G++PN ++Y+  I   C   +++ A ++F  M  +G + N+ TY+ +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYCKT +V ++  LY E+L   + P VV + TL  G  +  ++  A  LF  M    V
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 YN  I G CK+G ++EA  L   +  L     +  Y+ LI+GLC   ++  A  
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           LFQ +    + P+  TYN +IHG+C +  M++A DL  +M A GV PN +TF+TL+ G
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453



 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 141/258 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA ++ +LM + GV PN + YS +IDG+C TG + +A  L+  + +   + NVV + T
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK +++  + +L+  M+  G+ P +  YN L HG  +   +  A+ L  EM+  +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TY   I+GLC    + EA  LF+ ++  +       Y+ LI G CK   +E A 
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ PN++T++ +I G+CN   +  A  L+ +M  KG+ P+ VT+  L+   
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489

Query: 241 IRNNETSKVVELLHRMDE 258
            +     + + L   M E
Sbjct: 490 FKEANMKEALRLYSDMLE 507



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 129/242 (53%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  V+ TL+DGFC   E+  AR LFV M   G   N+  YN LI+G+CK+ ++ E++ L
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            SEM S  + P V TY  L +GL    QV  A +LF +M++  +   ++TYN+ I G CK
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              + +A +L   +     E  I  +S LIDG C +  ++ A  L+  +   G++P+VVT
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  +I     +  M +A  L+ DM   G+ PN  TF  L+ G  +    S  ++     +
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541

Query: 258 ER 259
           ++
Sbjct: 542 QQ 543



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 128/252 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  LL  M    + P+ F Y+ LI+G C+  ++  A  LF  M       +  TYN+
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++E++L+L SEM + G+ P ++T++TL  G   +  ++ A+ L+ EM    
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   ID   K   + EA  L+  +           ++CL+DG  K G+L  A 
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAI 534

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + +Q   +     N V +  +I G C +G + +A   F DM + G+ P+  ++ +++ G 
Sbjct: 535 DFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH 594

Query: 241 IRNNETSKVVEL 252
           ++    +  + L
Sbjct: 595 LQEKRITDTMML 606



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 117/240 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M++ GV PN +VY+ LI G C +G +  A  L   M+      +V TY  LIN
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C    V E+  L+ +M ++ I P+  TYN+L HG  + + +E AL L  EM  S V  
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              T++T IDG C    I  A  L+  + +      +  Y+ LID   K   ++ A  L+
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+ PN  T+  ++ GF  +G++  A D + +   +    N V F  L+ G  +N
Sbjct: 503 SDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQN 562



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 117/248 (47%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
            LMI RG+ P+  +Y  L       G   +  +L   M   G   NV  Y   I   C+ 
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             +EE+  ++  M   G+ P + TY+ +  G  +   V  A  L+ E+  +++      +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            T +DG CK   +V A  LF  +     +  +  Y+CLI G CK G +  A  L   +  
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           + L P+V TY I+I+G C + Q+ +A+ LF  M+ + + P+  T+N+L+ G  +     +
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427

Query: 249 VVELLHRM 256
            ++L   M
Sbjct: 428 ALDLCSEM 435



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 114/230 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  L   M   GV PN   +STLIDG+C   +I  A  L+  M I G + +VVTY  
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + K  +++E+L LYS+ML  GI P   T+  L  G ++  ++  A+  + E     
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  +   I+GLC+NGYI+ A+  F  +R       I +Y  ++ G  +  ++    
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            L   + + G++PN++   ++   +  +G +  A  L      K V+ +C
Sbjct: 605 MLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTVSNSC 654



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 11/243 (4%)

Query: 22  VYSTLIDGFCLTGEIDRA----RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           V+S LI  F   G  + A    RE+  S D   C+       +++NG  + +  +     
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACL-------SILNGLVRRRRFDSVWVD 186

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y  M+S+G+ P V  Y  LF   F+        KL DEM    +      Y  +I  LC+
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           +  + EA ++F  ++       +  YS +IDG CK G +  A+ L++ +    L+PNVV 
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           +  ++ GFC   ++  A  LF+ M   GV PN   +N L+ G  ++    + V LL  M+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366

Query: 258 ERN 260
             N
Sbjct: 367 SLN 369



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 1/243 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P++    ++++G       D     +  M   G + +V  Y  L     K     +   L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EM S GI+P V  Y      L   +++E A K+F+ M+   V     TY+  IDG CK
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G + +A  L++ + V +    +  +  L+DG CK  +L TA  LF  + + G+ PN+  
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM- 256
           YN +IHG C  G M +A  L  +ME+  ++P+  T+  L+ G    ++ ++   L  +M 
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401

Query: 257 DER 259
           +ER
Sbjct: 402 NER 404


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +++ M+ RG  P+   ++TLI        ++ A +L   + + G   +V T+N 
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK  D    + L+ EM S G  P  VTYN L   L  + ++ +AL L +EM+ + 
Sbjct: 413 LINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYNT ID LCK   I EA E+F  +           ++ LIDGLCK  +++ A 
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDAT 532

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + + + GL PN +TYN ++  +C  G + KA D+   M A G   + VT+ TL+ G 
Sbjct: 533 ELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592

Query: 241 IRNNETSKVVELLHRM 256
            +   T   ++LL  M
Sbjct: 593 CKAGRTQVALKLLRGM 608



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 135/253 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +++DLM+Q G  P+ F Y+T+I+     GE+D A+ +   M   GC+ +  T+NTLI 
Sbjct: 321 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
                  +EE+L+L  E+  KG+ P V T+N L + L ++      ++LF+EM+ S    
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ID LC  G +  A +L   +    C      Y+ +ID LCK  ++E A E+F
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+  + VT+N +I G C   ++D A +L   M  +G+ PN +T+N+++    + 
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQ 560

Query: 244 NETSKVVELLHRM 256
               K  ++L  M
Sbjct: 561 GNIKKAADILETM 573



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 122/228 (53%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RL + M   G  P+   Y+ LID  C  G++  A +L   M+ NGC  + VTYNT+I+  
Sbjct: 428 RLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDAL 487

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK   +EE+  ++ +M ++GI  + VT+NTL  GL +  +++ A +L ++M    +    
Sbjct: 488 CKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNN 547

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN+ +   CK G I +AA++  T+     E+ +  Y  LI+GLCK G+ + A +L + 
Sbjct: 548 ITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 607

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           +   G+ P    YN +I        +  A +LF +M   G  P+ +T+
Sbjct: 608 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTY 655



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 133/288 (46%), Gaps = 35/288 (12%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+ M   GV P+   ++TL+ GF   G I+ A  +   M   GC    VT N LINGYC
Sbjct: 219 MLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYC 278

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   VE++L    + ++ G  P  VTYNT  HGL +   V HALK+ D M       +  
Sbjct: 279 KMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVF 338

Query: 127 TYNTFIDGLCKNG-----------------------------------YIVEAAELFRTL 151
           TYNT I+ L KNG                                    + EA +L R L
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
            V      +  ++ LI+ LCK+G       LF+ +   G  P+ VTYNI+I   C+ G++
Sbjct: 399 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKL 458

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             A DL  +ME+ G   + VT+NT++    +     +  E+  +MD +
Sbjct: 459 GNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQ 506



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 126/245 (51%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I  G  P+   Y+T + G C  G +  A ++   M   G   +V TYNT+IN   K  ++
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 353

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E+  + ++M+ +G  P   T+NTL   L   +++E AL L  E+    ++ +  T+N  
Sbjct: 354 DEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNIL 413

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+ LCK G       LF  ++   C      Y+ LID LC +GKL  A +L   +   G 
Sbjct: 414 INALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGC 473

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             + VTYN +I   C   ++++A ++F  M+A+G++ + VTFNTL+ G  +        E
Sbjct: 474 PRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATE 533

Query: 252 LLHRM 256
           L+ +M
Sbjct: 534 LIEQM 538



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 1/236 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+ M   G   +   Y+T+ID  C    I+ A E+F  MD  G   + VT+NTLI+G C
Sbjct: 464 LLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLC 523

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K K ++++  L  +M+ +G++P  +TYN++     +   ++ A  + + M  +    +  
Sbjct: 524 KAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVV 583

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T I+GLCK G    A +L R +R+       +AY+ +I  L +   L  A  LF+ +
Sbjct: 584 TYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643

Query: 187 PRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             VG  P+ +TY I+    C   G + +A D  ++M  KG  P   +F  L  G +
Sbjct: 644 TEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 699



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 3/252 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---DINGCMHNVVTYNTLINGYCK 67
           M + G +  A V  + ++ +      D A +L ++    D  G   + V +N L+N   +
Sbjct: 115 MRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVE 174

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              ++   ++Y+EM  +GI+P VVT NTL   L   HQV  A+ + +EM    VA + +T
Sbjct: 175 GSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETT 234

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           + T + G  + G I  A  +   +    C       + LI+G CK+G++E A    Q   
Sbjct: 235 FTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEI 294

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G  P+ VTYN  +HG C +G +  A  +   M  +G  P+  T+NT++    +N E  
Sbjct: 295 ADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 354

Query: 248 KVVELLHRMDER 259
           +   ++++M +R
Sbjct: 355 EAKGIVNQMVDR 366



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 1/101 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  M  +G+RP    Y+ +I        +  A  LF  M   G   + +TY  +  
Sbjct: 601 ALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFR 660

Query: 64  GYCKTK-DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI 103
             C+    ++E+ +   EM++KG  P   ++  L  GL  +
Sbjct: 661 SLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 701


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 1/242 (0%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEES 74
           V P+   Y+TLIDG C  G  +    L   M     CM N VTYN LI+GYCK   +E +
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAA 435

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L+ +M   G+ P VVT NTL  G+ +  ++  A++ F+EMQ   +     TY   I  
Sbjct: 436 RELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRA 495

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            C    I +A ELF  +    C      Y  LI GL + GKL+ A  +   +   G  P+
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +V++N++I+GFC   ++D+A+++  +ME  G+ P+ VT+NTL+    +  + S    L+ 
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615

Query: 255 RM 256
           +M
Sbjct: 616 KM 617



 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 134/258 (51%), Gaps = 2/258 (0%)

Query: 1   MDEASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           M EA+R L D M + GV PN    +TL+DG C  G I+ A E F  M   G   N VTY 
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI  +C   ++E+++ L+ EML  G  P  + Y TL  GL +  +++ A  +  +M+ +
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             + +  ++N  I+G C+   + EA E+ + +     +     Y+ LI    K G   TA
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTLML 238
             L + + + GL+P VVTY  +IH +C +G +D+A  +F DM +   V PN V +N L+ 
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670

Query: 239 GCIRNNETSKVVELLHRM 256
              R N+    + L+  M
Sbjct: 671 SLCRKNQVDLALSLMDDM 688



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   Y+ LIDG+C    I+ ARELF  M+ +G   NVVT NTL++G CK   +  ++  
Sbjct: 414 PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEF 473

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           ++EM  KG++   VTY  L      ++ +E A++LFDEM  +  + +   Y T I GL +
Sbjct: 474 FNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQ 533

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G +  A+ +   ++       I +++ LI+G C+  KL+ A+E+ + +   G+ P+ VT
Sbjct: 534 AGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVT 593

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           YN +I  F   G    AH L   M  +G+ P  VT+  L+     N    + +++   M
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 6/257 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---DINGCM--HNVVTYNTL 61
           LL  M +  ++PN   +  LI+  C    +D A E+F  M   + NG +   +V+TYNTL
Sbjct: 327 LLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTL 386

Query: 62  INGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           I+G CK    EE L L   M S+    P  VTYN L  G  +   +E A +LFD+M    
Sbjct: 387 IDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDG 446

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T NT +DG+CK+G I  A E F  ++    +     Y+ LI   C +  +E A 
Sbjct: 447 VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAM 506

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +   G  P+ + Y  +I G    G++D+A  +   M+  G +P+ V+FN L+ G 
Sbjct: 507 ELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGF 566

Query: 241 IRNNETSKVVELLHRMD 257
            R N+  +  E+L  M+
Sbjct: 567 CRKNKLDEAYEMLKEME 583



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 132/263 (50%), Gaps = 6/263 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E   L+    +  V PN+   + LI   C +G  DRA ++   +   G +    + N L
Sbjct: 252 EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNAL 311

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD- 120
           +    + ++ +    L +EM    I+P VVT+  L + L +  +V+ AL++F++M   + 
Sbjct: 312 LTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGES 371

Query: 121 ----VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-KCELGIEAYSCLIDGLCKIGK 175
               V  +  TYNT IDGLCK G   E   L   +R   +C      Y+CLIDG CK   
Sbjct: 372 NGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASM 431

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +E A ELF  + + G+ PNVVT N ++ G C  G+++ A + F +M+ KG+  N VT+  
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491

Query: 236 LMLGCIRNNETSKVVELLHRMDE 258
           L+      N   K +EL   M E
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLE 514



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 1/250 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L D M++ G  P+A VY TLI G    G++DRA  +   M   G   ++V++N 
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C+   ++E+  +  EM + GI+P  VTYNTL     +      A +L  +M    
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-VLKCELGIEAYSCLIDGLCKIGKLETA 179
           +     TY   I   C NG + EA ++FR +    K       Y+ LI+ LC+  +++ A
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L   +   G+ PN  T+N M  G      + KA +L   M      P+ +T   L   
Sbjct: 682 LSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEW 741

Query: 240 CIRNNETSKV 249
                ET+K+
Sbjct: 742 LSAVGETAKL 751



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 88/231 (38%), Gaps = 41/231 (17%)

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           D EE + L S+     + P  +    L   L    + + A  +   +       E ++ N
Sbjct: 250 DEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCN 309

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL--- 186
             +  L +         L   ++ +  +  +  +  LI+ LCK  +++ A E+F+ +   
Sbjct: 310 ALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGG 369

Query: 187 --------PRV--------GL----------------------MPNVVTYNIMIHGFCND 208
                   P V        GL                      MPN VTYN +I G+C  
Sbjct: 370 ESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKA 429

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             ++ A +LF  M   GV PN VT NTL+ G  ++   +  VE  + M  +
Sbjct: 430 SMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGK 480


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 145/285 (50%), Gaps = 35/285 (12%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L +  +++GV+  A+  S L++G C  G+I +A E+  ++  +G +   V YNTLINGYC
Sbjct: 315 LFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYC 374

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  D+E + +++ +M S+ IRP  +TYN L +GL ++ ++  A  L  EM+ + V     
Sbjct: 375 QIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVE 434

Query: 127 TYNTFIDG-----------------------------------LCKNGYIVEAAELFRTL 151
           T+NT ID                                     CKNG I+EA  +   +
Sbjct: 435 TFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDM 494

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
            +     G + Y+ +ID   + G  + A+ L + +   G+ P++VTYN++I G C   Q+
Sbjct: 495 FIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQI 554

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +A +L   +   G+AP+ +++NTL+  C   + T + +EL   M
Sbjct: 555 SEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEM 599



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 138/258 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L D M ++ V PN   Y+T+IDG    G+++    L+  M  +G   NV+TYN L+
Sbjct: 206 DAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLL 265

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+  +  EM S+ + P   TY+ LF G       +  L LF+E     V 
Sbjct: 266 SGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVK 325

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T +  ++GLCK+G I +A E+ +TL           Y+ LI+G C+IG LE A+ +
Sbjct: 326 IGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSI 385

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +    + P+ +TYN +I+G     ++ +AHDL ++ME  GV P+  TFNTL+    R
Sbjct: 386 FQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445

Query: 243 NNETSKVVELLHRMDERN 260
             +  K   +L  M E+ 
Sbjct: 446 AGQLEKCFIILSDMQEKG 463



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E + +LD M  R + P+ F YS L DG   TG+      LF      G      T + 
Sbjct: 274 MGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSI 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   + ++  +   +++ G+  T V YNTL +G  +I  +E A  +F +M+   
Sbjct: 334 LLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRL 393

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+GL K   I EA +L   +        +E ++ LID   + G+LE  +
Sbjct: 394 IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCF 453

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   GL PNVV+Y  +++ FC +G++ +A  +  DM  K V P    +N ++   
Sbjct: 454 IILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAY 513

Query: 241 IRNNETSKVVELLHRM 256
           I    T +   L  +M
Sbjct: 514 IECGSTDQAFMLAEKM 529



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 119/236 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +   M  R +RP+   Y+ LI+G      I  A +L + M+ NG   +V T+NT
Sbjct: 379 LEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNT 438

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y +   +E+   + S+M  KG++P VV+Y ++ +   +  ++  A+ + D+M   D
Sbjct: 439 LIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKD 498

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      YN  ID   + G   +A  L   ++       I  Y+ LI GLCK  ++  A 
Sbjct: 499 VLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAE 558

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           EL  SL   GL P+V++YN +I   C     D+A +L  +M   G+ P+  T+  L
Sbjct: 559 ELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML 614



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 122/258 (47%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+  M + GV P+   ++TLID +   G++++   +   M   G   NVV+Y +++
Sbjct: 416 EAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIV 475

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N +CK   + E++ +  +M  K + P    YN +     E    + A  L ++M+ S V 
Sbjct: 476 NAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVP 535

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I GLCK   I EA EL  +LR       + +Y+ LI   C     + A EL
Sbjct: 536 PSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALEL 595

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + G+ P+  TY ++       G++ +  +L+  M  K V P    +N ++    +
Sbjct: 596 EKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAK 655

Query: 243 NNETSKVVELLHRMDERN 260
             E SKV  L   M ++ 
Sbjct: 656 CGEESKVEALRKEMSDKG 673



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 105/221 (47%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M ++G++PN   Y ++++ FC  G+I  A  +   M I   +     YN +I+ Y 
Sbjct: 455 ILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYI 514

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +    +++  L  +M S G+ P++VTYN L  GL +  Q+  A +L D +++  +A +  
Sbjct: 515 ECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVI 574

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I   C       A EL + +     +     Y  L   L   G++     L+Q +
Sbjct: 575 SYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQM 634

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
               ++P    YNIM+  +   G+  K   L  +M  KG+A
Sbjct: 635 LDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA 675



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 67/138 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L + M   GV P+   Y+ LI G C   +I  A EL  S+   G   +V++YNTL
Sbjct: 520 DQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTL 579

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  C   + + +L L  EM   GI+P+  TY  LF  L    +V     L+ +M   DV
Sbjct: 580 ISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDV 639

Query: 122 AAETSTYNTFIDGLCKNG 139
              +  YN  +D   K G
Sbjct: 640 VPCSGIYNIMVDAYAKCG 657



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-----YSCLI 167
           F+ +  +    +T T+N  +      G + EA  +   LR + C+ G  A     Y+ +I
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEAVGM---LRRMGCD-GAPAPNAFSYNVVI 195

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            GL K G    A +LF  +P   ++PN +TYN MI G    G ++    L+  M   G+ 
Sbjct: 196 AGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLK 255

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           PN +T+N L+ G  R     +   +L  M  R 
Sbjct: 256 PNVITYNVLLSGLCRAGRMGETAAVLDEMASRK 288



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 50/122 (40%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LLD +   G+ P+   Y+TLI   C     DRA EL   M   G   +  TY  
Sbjct: 554 ISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRM 613

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +       V E  NLY +ML K + P    YN +     +  +      L  EM    
Sbjct: 614 LFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKG 673

Query: 121 VA 122
           +A
Sbjct: 674 IA 675


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 17/274 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTG-----------------EIDRARELFVS 45
           EA  L   M+   + P+   ++ L+D  C  G                 ++++A+ +F  
Sbjct: 241 EAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNI 300

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           +       +V +Y  +I   CK K V+E+L+L++EM  KGI P  VTY++L  GL +  +
Sbjct: 301 IGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSER 360

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           + HA +L D+M      A+  TY +F+  LCKN  + +A  L + ++    +  I  Y+ 
Sbjct: 361 ISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNI 420

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LIDGLCK G+ E A  +FQ L   G    V TYNIMI+G C +G  D+A  L   ME  G
Sbjct: 421 LIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNG 480

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             P+ VT+ T++    +N+E  K  +LL  M  R
Sbjct: 481 CTPDVVTYETIIRALFKNDENHKAEKLLREMIAR 514



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 136/274 (49%), Gaps = 17/274 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA    D +I RG R N   Y  LI+G C  GE   A ++   +D      NVV Y+T+I
Sbjct: 136 EALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTII 195

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK K V E+  LYS+M+ K + P VVT++ L +G   + Q + A  LF EM  +++ 
Sbjct: 196 DSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNIN 255

Query: 123 AETSTYNTFIDGLCKNGYIVE-----------------AAELFRTLRVLKCELGIEAYSC 165
            +  T+N  +D LCK G   E                 A  +F  +   +    + +Y+ 
Sbjct: 256 PDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTI 315

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +I  LCKI  ++ A  LF  +   G+ P+ VTY+ +I G C   ++  A +L   M A+G
Sbjct: 316 IIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARG 375

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              + +T+ + +    +N++  K V L+ ++ ++
Sbjct: 376 QPADVITYTSFLHALCKNHQVDKAVALVKKIKDQ 409



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 120/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + +++ +R V P+   Y+ +I   C    +D A  LF  M   G   + VTY++
Sbjct: 291 VNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSS 350

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK++ +  +  L  +M ++G    V+TY +  H L + HQV+ A+ L  +++   
Sbjct: 351 LIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQG 410

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +TYN  IDGLCK G    A  +F+ L +   ++ +  Y+ +I+GLC  G  + A 
Sbjct: 411 IQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAM 470

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L + +   G  P+VVTY  +I     + +  KA  L  +M A+G+
Sbjct: 471 TLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 52/297 (17%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
            + P+   ++T+I+ +C  GE+D A  +   +   G   + +T  TLI G C    V E+
Sbjct: 78  AITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEA 137

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+ +  ++++G R   V+Y  L +GL ++ +   AL++  ++    V      Y+T ID 
Sbjct: 138 LHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDS 197

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK   + EA EL+  + V K    +  +S LI G C +G+ + A+ LF  +    + P+
Sbjct: 198 LCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPD 257

Query: 195 VVTYNIMIHGFCNDGQ-------------------------------------------- 210
           V T+NI++   C +G                                             
Sbjct: 258 VCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIII 317

Query: 211 --------MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
                   +D+A  LF +M  KG+ P+ VT+++L+ G  ++   S   ELL +M  R
Sbjct: 318 KRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHAR 374



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 108/218 (49%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A  L+  + +N    ++VT+NT+IN YC   +++ + ++ +++L  G  P  +T  TL  
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           GL    +V  AL   D +          +Y   I+GLCK G    A ++ R +       
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNT 186

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  YS +ID LCK   +  A+EL+  +    + P+VVT++ +I+GFC  GQ  +A  LF
Sbjct: 187 NVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLF 246

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +M    + P+  TFN L+    +   T +   +L  M
Sbjct: 247 HEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVM 284



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 95/192 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + M  +G+ P+   YS+LIDG C +  I  A EL   M   G   +V+TY +
Sbjct: 326 VDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTS 385

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++  CK   V++++ L  ++  +GI+P + TYN L  GL +  + E+A  +F ++    
Sbjct: 386 FLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKG 445

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  I+GLC  G   EA  L   +    C   +  Y  +I  L K  +   A 
Sbjct: 446 YKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAE 505

Query: 181 ELFQSLPRVGLM 192
           +L + +   GL+
Sbjct: 506 KLLREMIARGLL 517



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 76/157 (48%), Gaps = 4/157 (2%)

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCK---NGYIVEAAELFRTLRVLKCELGIEA 162
           V  A+  F  M   + +     +N  +  L K   N Y + A  L+  L++      I  
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPI-AISLYHRLQLNAITPSIVT 85

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           ++ +I+  C +G+++ A+ +   + ++G  P+ +T   +I G C +G++ +A      + 
Sbjct: 86  FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A+G   N V++  L+ G  +  ET   +++L ++D +
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGK 182


>gi|255660970|gb|ACU25654.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 350

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 49  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 108

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 109 MINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 168

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+G CKN    EA  L + L     + G+  YS L++GLC   K+E A 
Sbjct: 169 CSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERAL 228

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 229 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 288

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 289 YKDGDIRNALVIWARI 304



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 121/214 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 119 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 178

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 179 LINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKG 238

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 239 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 298

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            ++  + R GL P++++YNI + G C+  ++  A
Sbjct: 299 VIWARILRNGLEPDIISYNITLEGLCSCNRISDA 332



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 133/254 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 84  IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 143

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +G  +      A  L  E+    
Sbjct: 144 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKG 203

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  ++GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 204 LDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 263

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 264 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGL 323

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 324 CSCNRISDAILFLH 337



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 117/236 (49%), Gaps = 36/236 (15%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N ++ GY +   +++   L+  M S+G R +V ++NT+  GLF+  +V+  + +++ M+ 
Sbjct: 3   NAMLKGYFRVAKIKDCFELWEMMGSEGNR-SVSSFNTMMRGLFDNGKVDEVISIWELMKE 61

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEA-----------------------------AELFR 149
           S    ++ TY   + G CKNGYI ++                             A L R
Sbjct: 62  SGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDR 121

Query: 150 TLRVLK------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
            + VL       C+  +  Y+ LI+GL    K E A  +F+ +  +   P ++TYN +I+
Sbjct: 122 AVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLIN 181

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           GFC +    +A++L  ++  KG+ P  +T++ LM G   +++  + ++L +++  +
Sbjct: 182 GFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSK 237



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   ++TL++GF   G+I  A  ++  +  NG   ++++YN  + G C    + +++  
Sbjct: 276 PNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILF 335

Query: 78  YSEMLSKGIRPTVVTYNT 95
             + ++K I   V+T NT
Sbjct: 336 LHDAVTKKI---VLTKNT 350


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 136/258 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL+   G R +  +++TLIDG+CL GE+ +A  +  +M   G   +  TYNTL+
Sbjct: 415 DAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLV 474

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGY K+  +++ LNL+ EM  K I+PT VTYN +  GLF   +   A K+  EM      
Sbjct: 475 NGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTT 534

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  + GLC+N    EA  +F+ L  +  +  I   + +I+ +  + + E A +L
Sbjct: 535 VSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDL 594

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++   GL+PN  TY IMI     +G +++A ++F  ME  G AP     N  +   + 
Sbjct: 595 FSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLE 654

Query: 243 NNETSKVVELLHRMDERN 260
             E  K    + ++D ++
Sbjct: 655 KGEIVKAGNYMSKVDGKS 672



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 136/256 (53%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMI-QRGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M  + GV  P+   Y+T+I GF   G+I +A  L+  M   G + +VVT+N+
Sbjct: 97  QALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNS 156

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK + V+ +  L  +M+  G+ P  VTY ++ HG   + + E A K+F EM    
Sbjct: 157 IINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRG 216

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++N+F+D LCK+G   EAAE+F ++        I  Y  L+ G    G      
Sbjct: 217 LIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMM 276

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F ++   G++ N + + I+I  +   G MD+A  +  +M+ +G++P+  T++TL+   
Sbjct: 277 SFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISAL 336

Query: 241 IRNNETSKVVELLHRM 256
            R    +  V+  ++M
Sbjct: 337 CRMGRLADAVDKFNQM 352



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M+  GV PN   Y+++I G+   G  + A ++F  M   G + ++V++N+
Sbjct: 167 VDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNS 226

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++  CK    +E+  ++  M +KG RP +VTY  L HG          +  F+ M+   
Sbjct: 227 FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDG 286

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A    +   ID   K G + EA  +   ++       +  YS LI  LC++G+L  A 
Sbjct: 287 IVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAV 346

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA-PNCVTFNTLM 237
           + F  +   G+ PN V Y+ +I GFC  G + KA +L  +M   G+  PN   FN+++
Sbjct: 347 DKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIV 404



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 123/238 (51%), Gaps = 2/238 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYN 59
           D    LL  M + G  P+AF Y+ ++   C      +A +L   M  +   C  +VVTYN
Sbjct: 61  DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+I+G+ K   + ++ NLY EM+ +G  P VVT+N++ + L +   V++A  L  +M  +
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V     TY + I G    G   EA ++FR +        I +++  +D LCK G+ + A
Sbjct: 181 GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEA 240

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            E+F S+   G  PN+VTY I++HG+  +G        F  M+  G+  NC+ F  L+
Sbjct: 241 AEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 71/326 (21%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA+++   M  RG+ P+   +++ +D  C  G    A E+F SM   G   N+VTY  L
Sbjct: 203 EEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGIL 262

Query: 62  ING-----------------------------------YCKTKDVEESLNLYSEMLSKGI 86
           ++G                                   Y K   ++E++ + SEM  +G+
Sbjct: 263 LHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGL 322

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P V TY+TL   L  + ++  A+  F++M  + V   T  Y++ I G C +G +V+A E
Sbjct: 323 SPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKE 382

Query: 147 L----------------FRTLRVLKCELG--------------------IEAYSCLIDGL 170
           L                F ++    C+ G                    I  ++ LIDG 
Sbjct: 383 LVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGY 442

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C +G++  A+ +  ++   G+ P+  TYN +++G+   G++D   +LF +M  K + P  
Sbjct: 443 CLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTT 502

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
           VT+N ++ G  R   T    ++LH M
Sbjct: 503 VTYNIILDGLFRAGRTVAAQKMLHEM 528



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 131/258 (50%), Gaps = 1/258 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ +   M  +G RPN   Y  L+ G+   G        F +M  +G + N + +  LI
Sbjct: 239 EAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + Y K   ++E++ + SEM  +G+ P V TY+TL   L  + ++  A+  F++M  + V 
Sbjct: 299 DAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQ 358

Query: 123 AETSTYNTFIDGLCKNGYIVEAAEL-FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             T  Y++ I G C +G +V+A EL +  +        I  ++ ++  +CK G++  A  
Sbjct: 359 PNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHH 418

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  +  +G   +++ +N +I G+C  G+M KA  +   M + G+ P+  T+NTL+ G  
Sbjct: 419 IFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYF 478

Query: 242 RNNETSKVVELLHRMDER 259
           ++      + L   M ++
Sbjct: 479 KSGRIDDGLNLFREMSDK 496



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 38/264 (14%)

Query: 14  RGVRPNAFVYSTLIDG-----------------------------------FCLTGEIDR 38
           R   P  F Y  +++G                                    C T   D 
Sbjct: 2   RVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDD 61

Query: 39  A-RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS-KGI-RPTVVTYNT 95
           A + L   M   GC+ +  +Y  ++   C     +++L+L   M   +G+  P VVTYNT
Sbjct: 62  AVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNT 121

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           + HG F+  ++  A  L+ EM       +  T+N+ I+ LCK   +  A  L R +    
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                  Y+ +I G   +G+ E A ++F+ +   GL+P++V++N  +   C  G+  +A 
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLG 239
           ++F  M AKG  PN VT+  L+ G
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHG 265



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 3/208 (1%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK-LF 113
           + TY  ++NG C+ +  E  L  +  +L  G++      NT+   L    + + A+K L 
Sbjct: 8   IFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLL 67

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK--CELGIEAYSCLIDGLC 171
             M       +  +Y   +  LC +    +A +L R +   +  C   +  Y+ +I G  
Sbjct: 68  RRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFF 127

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K GK+  A  L+  + + G +P+VVT+N +I+  C    +D A  L   M   GV PN V
Sbjct: 128 KEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKV 187

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
           T+ +++ G        +  ++   M  R
Sbjct: 188 TYTSMIHGYSTLGRWEEATKMFREMTGR 215



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 35/191 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           M +A  +LD MI  G+ P+ F Y+TL++G+  +G ID    LF  M              
Sbjct: 448 MGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNI 507

Query: 47  -------------------DINGCMHNVV--TYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                              ++ GC   V   TYN ++ G C+    +E++ ++ ++ +  
Sbjct: 508 ILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMN 567

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           ++  + T NT+ + ++ + + E A  LF  +  S +    STY   I  L K G + EA 
Sbjct: 568 VKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEAD 627

Query: 146 ELFRTLRVLKC 156
            +F ++    C
Sbjct: 628 NMFSSMEKSGC 638



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 3/172 (1%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE- 146
           PT+ TY  + +G     + E  L  F  +  + + A+ +  NT +  LC      +A + 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM--PNVVTYNIMIHG 204
           L R +  L C     +Y+ ++  LC   + + A +L + + +   +  P+VVTYN +IHG
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           F  +G++ KA +L+ +M  +G  P+ VT N+++    +         LL +M
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQM 177



 Score = 42.7 bits (99), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 47/108 (43%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  +   +    V+ N    +T+I+        + A++LF ++  +G + N  TY  +
Sbjct: 554 DEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIM 613

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           I    K   VEE+ N++S M   G  P     N     L E  ++  A
Sbjct: 614 IRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661


>gi|255660968|gb|ACU25653.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 376

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G +     Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLGAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+G CKN    EA  L + L     + G+  YS L++GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M+ A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMELALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 121/214 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMELALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            ++  + R GL P++++YNI + G C+  ++  A
Sbjct: 325 VIWARILRNGLEPDIISYNITLEGLCSCNRISDA 358



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G    AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +G  +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  ++GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK+E A 
Sbjct: 230 LDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMELAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   ++TL++GF   G+I  A  ++  +  NG   ++++YN  + G C    + +++  
Sbjct: 302 PNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILF 361

Query: 78  YSEMLSKGIRPTVVTYNT 95
             + ++K I   V+T NT
Sbjct: 362 LHDAVTKKI---VLTKNT 376


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 150/257 (58%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E+  LL  +I RG+RP+A +Y+ ++   C +  +  A EL   M   GC   ++T+NT
Sbjct: 98  VEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNT 157

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+ K++E + +L  +M + G++  VVTYNTL  GL +  +++ A +L + M+ S 
Sbjct: 158 LISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASG 217

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   Y++F+ GLCK+G +++A ++   +R    +  +  Y+ ++DGLCK GK++TA 
Sbjct: 218 CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTAL 277

Query: 181 ELFQSLPRV-GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+ + +    G   NVV Y+ ++ G C  G+  +A  +   M   G  P+ VT+++L+ G
Sbjct: 278 EMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  + VE +  M
Sbjct: 338 LCKAGKIEEAVEAVREM 354



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 6/262 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  LL  M   GV+ +   Y+TL+DG C  G +  A +L   M  +GC  +VV Y++
Sbjct: 168 LEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            + G CK+  V ++  +  +M      P VVTYNT+  GL +  +++ AL++ ++M  SD
Sbjct: 228 FVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287

Query: 121 -VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                   Y+T +DGLCK G   EA  +   +    C   +  YS L++GLCK GK+E A
Sbjct: 288 GCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-----EAKGVAPNCVTFN 234
            E  + +   G  PN VTY  ++HG C+ G++ +A  +  +M           P+  T+N
Sbjct: 348 VEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYN 407

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
            L+ G  +       ++   RM
Sbjct: 408 ALIGGLCKAGRIDDALKFFQRM 429



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 142/295 (48%), Gaps = 41/295 (13%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTYNTLIN 63
           RLL+ M  R ++PN   Y+ L++G C       A EL   M   G     ++VTY+TL++
Sbjct: 31  RLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLS 90

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRP----------------------------------- 88
           GYCK   VEES  L  E++S+G+RP                                   
Sbjct: 91  GYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCP 150

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T++T+NTL  G      +E A  L  +M  S V A+  TYNT +DGLCK G + EA +L 
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             ++   C   + AYS  + GLCK GK+  A ++ + +      PNVVTYN ++ G C  
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKS 270

Query: 209 GQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLGCI---RNNETSKVVELLHRMDER 259
           G++D A ++   M +  G   N V ++T++ G     R  E   V+E + R   R
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCR 325



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 6/219 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTL 61
           +A ++L+ M      PN   Y+T++DG C +G+ID A E+   M   +GC  NVV Y+T+
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G CK    +E+ ++   M   G RP VVTY++L +GL +  ++E A++   EM     
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-----CELGIEAYSCLIDGLCKIGKL 176
                TY + + GLC  G + EA  +   +         C   +  Y+ LI GLCK G++
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRI 419

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           + A + FQ +   G  P+ V+Y+ ++ G    G+  +A 
Sbjct: 420 DDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAE 458



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 6/181 (3%)

Query: 1   MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +D A  +++ M    G   N   YST++DG C  G    AR +  +M   GC  +VVTY+
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--- 116
           +L+NG CK   +EE++    EM  +G +P  VTY +L HGL    ++  A ++ +EM   
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392

Query: 117 --QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
                      STYN  I GLCK G I +A + F+ +R   C+    +YS +++GL + G
Sbjct: 393 GGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452

Query: 175 K 175
           +
Sbjct: 453 R 453



 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 2/213 (0%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           MD  GC  N VT+N L+NG+ K     +   L   M ++ I+P VV+YN L  GL ++ +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 106 VEHALKLFDEM--QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
              A +L  +M  +      +  TY+T + G CK G + E+ EL + +           Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + ++  LCK  +L  A EL + + R G  P ++T+N +I G C +  ++ A  L   M A
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            GV  + VT+NTLM G  +     +  +LL RM
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +++ M + G RP+   YS+L++G C  G+I+ A E    M + GC  N VTY +L+
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIR-----PTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +G C    + E+  +  EM S G       P+V TYN L  GL +  +++ ALK F  M+
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMR 430

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
                 +  +Y+T ++GL ++G  ++A  +   +R
Sbjct: 431 SQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           ++ L++G  K G+      L +++    + PNVV+YN ++ G C   +  +A +L  DM 
Sbjct: 13  FNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72

Query: 223 AKG--VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++G    P+ VT++TL+ G  +  +  +  ELL  +  R 
Sbjct: 73  SRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRG 112



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           R G  PN VT+N +++GF   G+      L   M A+ + PN V++N L+ G  +     
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62

Query: 248 KVVELLHRMDERN 260
           +  EL+  M  R 
Sbjct: 63  EAEELVRDMISRG 75


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 128/227 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+S LL+ M+ R +RP+   +S  +D FC  G +  A+ +   M   G   NVVTYN+L+
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM 426

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC    ++E+  ++  M++KG  P V++YN L  G  +  +++ A +LFDEM H  + 
Sbjct: 427 DGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLT 486

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + T+ T I GLC+ G    A ELF+ +    C   +  YS L+ G CK G L+ A  L
Sbjct: 487 PNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALAL 546

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           F++L +  L PN V   I++ G C  G+++ A +LF  +  + + P+
Sbjct: 547 FEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 121/197 (61%), Gaps = 4/197 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +++LMI+RG+RPN   Y++L+DG+CL  ++D AR++F  M   GC  +V++YN 
Sbjct: 400 VSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNI 459

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYCK++ ++E+  L+ EM  KG+ P  +T+ TL  GL +  +   A +LF +M    
Sbjct: 460 LIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHG 519

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
              +  TY+T + G CK+G++ EA  LF  L+  K +L      C  L+ G+CK GKLE 
Sbjct: 520 CPPDLITYSTLLSGFCKHGHLDEALALFEALK--KSQLKPNHVICKILLGGMCKAGKLED 577

Query: 179 AWELFQSLPRVGLMPNV 195
           A ELF SL    L P+V
Sbjct: 578 AKELFSSLSIEELQPDV 594



 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   LD ++ RG +P  + ++ +++G C  G+   A      M    C   VV+Y+ +I
Sbjct: 192 EAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIII 251

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V E+++L+  M S GI PTVVTYN+L +G+    Q + A  LF EM   ++ 
Sbjct: 252 DSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMK 311

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T++  +D LCK G ++EA  +F  +  +  E  I  YS LI G+CK    + +  L
Sbjct: 312 PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTL 371

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI 241
              +    + P+VVT++I +  FC  G + +A  +   M  +G+ PN VT+N+LM G C+
Sbjct: 372 LNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCL 431

Query: 242 RN--NETSKVVELL 253
            +  +E  KV +++
Sbjct: 432 HSQMDEARKVFDIM 445



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 133/256 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +AS L   M++  ++P+   +S L+D  C  G +  A  +F  M       ++VTY++LI
Sbjct: 297 QASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLI 356

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK+   +ES  L +EMLS+ IRP VVT++       +   V  A  + + M    + 
Sbjct: 357 HGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLR 416

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ +DG C +  + EA ++F  +    C   + +Y+ LI G CK  +++ A +L
Sbjct: 417 PNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQL 476

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   GL PN +T+  +I G C  G+   A +LF  M + G  P+ +T++TL+ G  +
Sbjct: 477 FDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCK 536

Query: 243 NNETSKVVELLHRMDE 258
           +    + + L   + +
Sbjct: 537 HGHLDEALALFEALKK 552



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 129/255 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   MIQ  + P+   YS+LI G C +     +  L   M       +VVT++  +
Sbjct: 332 EALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWV 391

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +CK   V E+ ++ + M+ +G+RP VVTYN+L  G     Q++ A K+FD M +   A
Sbjct: 392 DVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCA 451

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YN  I G CK+  I EA +LF  +           ++ LI GLC+ G+   A EL
Sbjct: 452 PDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKEL 511

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   G  P+++TY+ ++ GFC  G +D+A  LF  ++   + PN V    L+ G  +
Sbjct: 512 FKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCK 571

Query: 243 NNETSKVVELLHRMD 257
             +     EL   + 
Sbjct: 572 AGKLEDAKELFSSLS 586



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 127/253 (50%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  + + G +P+   ++TLI+G C+ G I  A E    +   G    V T+  ++NG C
Sbjct: 161 VLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLC 220

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K      ++    +M+     P VV+Y+ +   L +   V  A+ LF  M+   ++    
Sbjct: 221 KIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVV 280

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN+ I G+C +G   +A+ LF+ +     +  +  +S L+D LCK G +  A  +F  +
Sbjct: 281 TYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKM 340

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            ++ + P++VTY+ +IHG C      ++  L  +M ++ + P+ VTF+  +    +    
Sbjct: 341 IQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMV 400

Query: 247 SKVVELLHRMDER 259
           S+   +++ M ER
Sbjct: 401 SEAQSIINLMIER 413



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 128/246 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV  + +  + LI+  C    +     +   +   G   +++T+NTLING C    + E+
Sbjct: 134 GVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEA 193

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           +     ++S+G +PTV T+  + +GL +I +   A+    +M   D   E  +Y+  ID 
Sbjct: 194 MEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDS 253

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCKN  + EA +LF  +R +     +  Y+ LI G+C  G+ + A  LF+ +    + P+
Sbjct: 254 LCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPD 313

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVT++I++   C +G + +A  +F  M    + P+ VT+++L+ G  +++   +   LL+
Sbjct: 314 VVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLN 373

Query: 255 RMDERN 260
            M  RN
Sbjct: 374 EMLSRN 379



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 113/236 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A    + M+     P    ++ L+         D    ++  M+  G   +V T   L
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  C    V    ++  ++   G +P+++T+NTL +GL    ++  A++  D +     
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+   ++GLCK G    A    + +  L CE  + +YS +ID LCK   +  A +
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           LF  +  +G+ P VVTYN +I+G CN GQ  +A  LF +M    + P+ VTF+ L+
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILV 321



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/152 (19%), Positives = 72/152 (47%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           + AL  F++M H +     + +N  +  L +  +      ++R +        +   + L
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           I+ LC +  +   + +   + ++G  P+++T+N +I+G C +G++ +A +    + ++G 
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            P   T   ++ G  +  +TS  +  + +M E
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVE 237


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 140/257 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L++ M+ RGV PN   YST+I      G ++ +  +F  M + GC  NV T+ +LI
Sbjct: 262 EAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLI 321

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+     V +++ L++ M+ +G+ P VV YNTL HGL     ++ A+ ++++M+   + 
Sbjct: 322 KGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIR 381

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              +TY+T I G  K+G +V A E +  +    C   +  Y+C++D LC++   + A++L
Sbjct: 382 PNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDL 441

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++   G  P V+T+N  I G C  G+++ A ++   ME     PN  T+N L+ G  R
Sbjct: 442 IDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFR 501

Query: 243 NNETSKVVELLHRMDER 259
            N   +   L+  ++ER
Sbjct: 502 ANAFREACGLIRELEER 518



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 128/250 (51%), Gaps = 5/250 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M   G+ PN F Y+ L+   C  G++D A +L V M   GC  + V+Y T+I+  C
Sbjct: 166 LYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMC 225

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K  DV+++       L+    P V  YN L HG+ +  + + A  L +EM    V     
Sbjct: 226 KLGDVDKA-----RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVI 280

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +Y+T I  L   G +  +  +F  + V  C   ++ ++ LI G    G++  A  L+  +
Sbjct: 281 SYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM 340

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R G+ PNVV YN +IHG C+DG MD+A  ++  ME   + PN  T++T++ G  ++ + 
Sbjct: 341 IREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDL 400

Query: 247 SKVVELLHRM 256
               E  ++M
Sbjct: 401 VSACETWNKM 410



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 129/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RG RPN   +++LI GF + G +  A  L+  M   G   NVV YNTLI+G C   +
Sbjct: 305 MFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGN 364

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E+++++++M    IRP V TY+T+ +G  +   +  A + +++M +         Y  
Sbjct: 365 MDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTC 424

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +D LC+     +A +L   +    C   +  ++  I GLC+ G++E A  +   + +  
Sbjct: 425 MVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYE 484

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +PN+ TYN ++ G        +A  L  ++E + V  +CVT+NT+M G   N    +V+
Sbjct: 485 CLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVL 544

Query: 251 ELLHRM 256
           +LL +M
Sbjct: 545 QLLGKM 550



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 30/288 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD-----INGCMH-- 53
           +D A +LL  M  +G  P+   Y+T+I   C  G++D+AREL +  +      N  +H  
Sbjct: 195 VDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGV 254

Query: 54  -----------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                                  NV++Y+T+I+      +VE SL ++  M  +G RP V
Sbjct: 255 CKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNV 314

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            T+ +L  G F   +V  A+ L++ M    V+     YNT I GLC +G + EA  ++  
Sbjct: 315 QTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQ 374

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +        +  YS +I G  K G L +A E +  +   G  PNVV Y  M+   C    
Sbjct: 375 MEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSM 434

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            D+A DL  +M + G  P  +TFN  + G  R       + +L +M++
Sbjct: 435 FDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEK 482



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L +LMI+ GV PN   Y+TLI G C  G +D A  ++  M+ +    NV TY+T+I
Sbjct: 332 DAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTII 391

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+ K+ D+  +   +++M++ G RP VV Y  +   L ++   + A  L D M      
Sbjct: 392 YGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCP 451

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N FI GLC+ G +  A  +   +   +C   I  Y+ L+DGL +      A  L
Sbjct: 452 PTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGL 511

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + L    +  + VTYN +++GF  +G   +   L   M   G+  + +T NT
Sbjct: 512 IRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNT 564



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 36/275 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  + + M +  +RPN   YST+I GF  +G++  A E +  M   GC  NVV Y  
Sbjct: 365 MDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTC 424

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  C+    +++ +L   M+S G  PTV+T+N    GL    +VE A+ + D+M+  +
Sbjct: 425 MVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYE 484

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL---------- 170
                 TYN  +DGL +     EA  L R L   K E     Y+ ++ G           
Sbjct: 485 CLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVL 544

Query: 171 -------------------------CKIGKLETAWELFQSL-PRVGLMPNVVTYNIMIHG 204
                                    CK+GK++TA ++  ++        +++T+ I++ G
Sbjct: 545 QLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWG 604

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            CN    ++A     +M  +G+ PN  T+N L+ G
Sbjct: 605 ICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRG 639



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 5/217 (2%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
             Y T+ID      E+D    L   M +     +   +  +I  Y ++   E+ L ++  
Sbjct: 75  LTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYR 134

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           +   G  P+V  YN +   L   +  +    L++ M+   +     TYN  +  LC+NG 
Sbjct: 135 IREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGK 194

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           +  A +L   +    C+    +Y+ +I  +CK+G ++ A EL          P V  YN 
Sbjct: 195 VDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFE-----PVVPVYNA 249

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +IHG C + +  +A DL  +M  +GV PN ++++T++
Sbjct: 250 LIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVI 286



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 90/189 (47%), Gaps = 1/189 (0%)

Query: 70  DVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           D+  SL  +  + + G  + T +TY T+   L   ++++    L  +M+  +V      +
Sbjct: 53  DIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELF 112

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
              I    ++    +  ++F  +R   CE  ++ Y+ ++D L      +    L+ ++  
Sbjct: 113 QFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKS 172

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            GL PNV TYN+++   C +G++D A  L ++M  KG  P+ V++ T++    +  +  K
Sbjct: 173 EGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDK 232

Query: 249 VVELLHRMD 257
             EL  + +
Sbjct: 233 ARELAMKFE 241



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 1/157 (0%)

Query: 104 HQVEHALKLFDEMQHSDVAAETS-TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
           H +  +L+ F  + +S     T  TY T ID L +N  +   + L + +++       E 
Sbjct: 52  HDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQEL 111

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           +  +I    +    E   ++F  +   G  P+V  YN+++    +       + L+ +M+
Sbjct: 112 FQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMK 171

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++G+ PN  T+N L+    +N +     +LL  M  +
Sbjct: 172 SEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNK 208



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 36/135 (26%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+  + +R V  +   Y+T++ GF   G   +  +L   M +NG   + +T NT +
Sbjct: 507 EACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTV 566

Query: 63  NGYCKTKDV------------------------------------EESLNLYSEMLSKGI 86
           N YCK   V                                    EE++    EML +GI
Sbjct: 567 NAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGI 626

Query: 87  RPTVVTYNTLFHGLF 101
            P + T+N L  G F
Sbjct: 627 FPNIATWNVLVRGFF 641


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 133/265 (50%), Gaps = 6/265 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLDLM + G  PN   YS L++G C  G  D+   L   M   G   +V+ YNT
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK++ ++E+L L   M+  G  PTVVTYN+L        QV+ A +L   M    
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK------IG 174
              +   YNT I GLC++  + +A  L + +   +C   +  YS +IDGLCK        
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADW 331

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           KLE A E+ + + + G  PN  TY ++I G C   +  +A  L   M    V P+  +F+
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFS 391

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
            ++    ++++     ++   M ER
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSER 416



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 1/244 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN F Y +LI G C  G++D+A EL   M   G    V  +N +I G CK     ++L  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HSDVAAETSTYNTFIDGLC 136
           +  +      P ++T+N L   L +  +VE A ++F+ M   S       TY T I+GLC
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K+G +  A EL   +    C   +  YS L++GLCK G+ +  + L Q + R G  P+V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            YN +++G C   ++D+A +L   M   G  P  VT+N+LM    R+ +  +   L+  M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 257 DERN 260
            ER 
Sbjct: 268 SERG 271



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 130/245 (53%), Gaps = 6/245 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   Y+T+I+G C  G++DRA EL   M+  GC  NV+TY+ L+ G CK    ++   L
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTL 193

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EM  +G +P V+ YNTL +GL +  +++ AL+L   M  S       TYN+ ++  C+
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           +  +  A  L + +    C   +  Y+ +I GLC+  +L+ A  L + +     +P+V+T
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313

Query: 198 YNIMIHGFCNDGQMD------KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           Y+ +I G C D ++D       A ++   M+  G  PN  T+  ++ G  R  ++ + + 
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373

Query: 252 LLHRM 256
           LL RM
Sbjct: 374 LLRRM 378



 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LLD M  RG+ P   V++ +I G C  G    A   F ++    C  +++T+N 
Sbjct: 46  LDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNI 105

Query: 61  LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L++   K+  VEE+  ++  M  S    P VVTY T+ +GL +  +++ A++L D M  +
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TY+  ++GLCK G   +   L + +     +  +  Y+ L++GLCK  +L+ A
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL Q + R G  P VVTYN ++  FC   Q+D+A  L   M  +G  P+ + +NT++ G
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285

Query: 240 CIRNNETSKVVELLHRM 256
             R+        LL +M
Sbjct: 286 LCRDARLDDAQALLKQM 302



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+   LL  M +RG +P+  +Y+TL++G C +  +D A EL   M  +GC   VVTYN+L
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +  +C++K V+ +  L   M  +G  P V+ YNT+  GL    +++ A  L  +M  +  
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307

Query: 122 AAETSTYNTFIDGLCKNGYI-----VEAA-ELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
             +  TY+T IDGLCK+  +     +EAA E+   ++   C      Y+ +I+GLC+  K
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + A  L + +    ++P++ +++++I   C    +D A+ +F  M  +   PN V +  
Sbjct: 368 SQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAA 427

Query: 236 LMLGCIRNNETSKVVELLHRMDE 258
           L+ G  +  E  K V +   M E
Sbjct: 428 LIDGLSKGGEVDKAVRVFELMVE 450



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 118/223 (52%), Gaps = 1/223 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLN 76
           P+   ++ L+D    +G ++ A ++F SM  +  C+ NVVTY T+ING CK   ++ ++ 
Sbjct: 98  PDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE 157

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L   M   G  P V+TY+ L  GL +  + +    L  EM       +   YNT ++GLC
Sbjct: 158 LLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLC 217

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K+  + EA EL + +    C   +  Y+ L++  C+  +++ A+ L Q +   G  P+V+
Sbjct: 218 KSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            YN +I G C D ++D A  L   M A    P+ +T++T++ G
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 113/207 (54%), Gaps = 1/207 (0%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C+ N  TY +LI+G CK   ++++  L  EM  +GI P V  +N +  GL +  +   AL
Sbjct: 26  CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDAL 85

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV-LKCELGIEAYSCLIDG 169
             F  +  +    +  T+N  +D L K+G + EA ++F ++    +C   +  Y+ +I+G
Sbjct: 86  GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK GKL+ A EL   +   G  PNV+TY++++ G C  G+ DK   L  +M  +G  P+
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            + +NTL+ G  ++    + +EL+  M
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLM 232



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 7/266 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+ +M +RG  P+   Y+T+I G C    +D A+ L   M    C+ +V+TY+T
Sbjct: 257 VDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316

Query: 61  LINGYCKTKDVEESLNLYS-----EMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           +I+G CK   V+    L +     EM+ + G  P   TY  +  GL    + + AL L  
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            M  S+V  + S+++  I  LCK+  +  A ++F  +   +C+    AY+ LIDGL K G
Sbjct: 377 RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +++ A  +F+ +      P V TYN ++ G C  G++++A  +   M  K   P+  ++ 
Sbjct: 437 EVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYG 495

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+ G  R +   +  EL   ++ + 
Sbjct: 496 ALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 7/243 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR------ARELFVSMDINGCMHN 54
           +D+A  LL  M+     P+   YST+IDG C    +D       A E+   M   GC  N
Sbjct: 292 LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
             TY  +I G C+ +  +++L L   M+   + P + +++ +   L + H ++ A K+F 
Sbjct: 352 AGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFG 411

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            M   +       Y   IDGL K G + +A  +F  L V     G+  Y+ ++DGLC +G
Sbjct: 412 MMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVG 470

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           ++E A  + + +      P+  +Y  +I G C    +++A++LF  +EAKG A     +N
Sbjct: 471 RIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530

Query: 235 TLM 237
            L+
Sbjct: 531 VLV 533



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 1/215 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L++M Q G  PNA  Y+ +I+G C   +  +A  L   M  +  + ++ +++ 
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK+ D++ +  ++  M  +  +P  V Y  L  GL +  +V+ A+++F+ M  S 
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES- 451

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                +TYN+ +DGLC  G I EA  +   +   +C     +Y  LI GLC++  +E A+
Sbjct: 452 FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAY 511

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           ELFQ++   G    V  YN++++  C   ++  AH
Sbjct: 512 ELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 1/188 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  MI   V P+   +S +I   C + ++D A ++F  M    C  N V Y  LI
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALI 429

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K  +V++++ ++ E++ +  RP V TYN++  GL  + ++E A+++ + M H +  
Sbjct: 430 DGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECF 488

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + ++Y   I GLC+   + EA ELF+ +      + +  Y+ L++ LCK  +L  A  +
Sbjct: 489 PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGV 548

Query: 183 FQSLPRVG 190
              L   G
Sbjct: 549 ANKLIEAG 556



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 47/87 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+++ MI +   P+   Y  LI G C    ++ A ELF +++  G    V  YN 
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNV 531

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR 87
           L+N  CK K + ++  + ++++  G +
Sbjct: 532 LVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 147/295 (49%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L  +++RG++PNA  Y+ LIDGF   G+ +RA  +F  M          T+NT
Sbjct: 480 MDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNT 539

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING  KT  V E+ +  +  + +G   T +TYN++  G F+   V+ AL  + EM  S 
Sbjct: 540 VINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESG 599

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TY + IDGLCK+  I  A E+   ++    +L + AYS LIDG CK+  +E+A 
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN--------------------------------- 207
           + F  L  +GL PN V YN MI GF +                                 
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGL 719

Query: 208 --DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +G++  A DL+ +M +K + P+ V +  L+ G   N +     ++L  MD  N
Sbjct: 720 LKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNN 774



 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 135/252 (53%), Gaps = 1/252 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL D M+  G+  N  V  +L+ G+C+ G+++ A +LF  +   G + +VV ++ LI
Sbjct: 308 EALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLI 367

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG  K  D+E++  LY+ M   GI+P V   N+L  G  E + +EHA  LFDE     + 
Sbjct: 368 NGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI- 426

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  +  L + G + EA  L+  +        + +Y+ LI G CK G ++ A+ +
Sbjct: 427 TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSM 486

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +S+   GL PN VTY ++I GF   G  ++A  +F  M A  +AP   TFNT++ G  +
Sbjct: 487 LKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGK 546

Query: 243 NNETSKVVELLH 254
               S+  + L+
Sbjct: 547 TGRVSETQDKLN 558



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 128/236 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+ P+   Y++LIDG C + +I  A E+   M   G   +VV Y+ LI+G+CK  D
Sbjct: 595 MCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHD 654

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E +   ++E+L  G+ P  V YN++  G   ++ +E AL L  EM  + V  +   Y +
Sbjct: 655 MESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTS 714

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I GL K G +  A +L+  +        I  Y+ LI+GL   G+LE A ++ + +    
Sbjct: 715 IIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNN 774

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
           + P+V+ YNI+I G   +G + +A  L  +M  KG+ P+  T++ L+ G ++ + T
Sbjct: 775 ITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L + M+ +G+ P+   Y+ LI G C  G +D+A  +  S+   G   N VTY  
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K  D E +  ++ +M++  I PT  T+NT+ +GL +  +V       +      
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQG 564

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
             + + TYN+ IDG  K G +  A   +R +    CE GI      Y+ LIDGLCK  K+
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREM----CESGISPDVITYTSLIDGLCKSNKI 620

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A E+   +   G+  +VV Y+ +I GFC    M+ A   F ++   G+ PN V +N++
Sbjct: 621 GLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSM 680

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G I  N     + L   M
Sbjct: 681 ISGFIHLNNMEAALNLHQEM 700



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E    L+  I++G    +  Y+++IDGF   G +D A   +  M  +G   +V+TY +
Sbjct: 550 VSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTS 609

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+  +  +L ++S+M  KG++  VV Y+ L  G  ++H +E A K F E+    
Sbjct: 610 LIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIG 669

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T  YN+ I G      +  A  L + +   K    ++ Y+ +I GL K GKL  A 
Sbjct: 670 LTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLAL 729

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +    ++P++V Y ++I+G  N+GQ++ A  +  +M+   + P+ + +N L+ G 
Sbjct: 730 DLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGN 789

Query: 241 IRNNETSKVVELLHRMDER 259
            R     +   L   M ++
Sbjct: 790 FREGNLQEAFRLHDEMLDK 808



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 1/239 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L D +++ GV P+  ++S LI+G    G++++A EL+  M + G   NV   N+L+ 
Sbjct: 344 ALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLE 403

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+ +   +E +  L+ E +  GI   VVTYN L   L E+ +V  A  L+++M    +  
Sbjct: 404 GFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITP 462

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +YN  I G CK G + +A  + +++     +     Y+ LIDG  K G  E A+ +F
Sbjct: 463 SLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVF 522

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           + +    + P   T+N +I+G    G++ +  D   +   +G     +T+N+++ G  +
Sbjct: 523 EQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFK 581



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 129/258 (50%), Gaps = 1/258 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E  +       RG+  +A  YS L+   C   +++ A EL   M   G + +  TY  +
Sbjct: 237 EEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAV 296

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    K  +  E+L L  EM+S G+   V+   +L  G   +  V  AL+LFDE+    V
Sbjct: 297 IVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGV 356

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +   ++  I+G  K G + +A EL+  ++++  +  +   + L++G  +   LE A+ 
Sbjct: 357 VPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYG 416

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF      G+  NVVTYNI++      G++++A +L+  M +KG+ P+ V++N L+LG  
Sbjct: 417 LFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHC 475

Query: 242 RNNETSKVVELLHRMDER 259
           +     K   +L  + ER
Sbjct: 476 KKGCMDKAYSMLKSILER 493



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+   + G   ++ V++ L+  F    +I  A E F +M  +  +  V   N L+    
Sbjct: 137 LLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMV 196

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   V ++  LY EM+ +GI     T + +     +  + E   K F E +   +  + +
Sbjct: 197 RRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAA 256

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y+  +  +C+   +  A EL + +R          Y+ +I    K G    A  L   +
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             VGL  NV+    ++ G+C  G ++ A  LF ++   GV P+ V F+ L+ GC +  + 
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376

Query: 247 SKVVELLHRM 256
            K  EL  RM
Sbjct: 377 EKAYELYTRM 386



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 100/229 (43%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++  + P   + + L+        +  AR+L+  M   G   +  T + ++    K   
Sbjct: 176 MLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGK 235

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            EE    + E   +G+      Y+ L   +     +  A +L  EM+         TY  
Sbjct: 236 FEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTA 295

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I    K G  VEA  L   +  +   + +     L+ G C +G +  A +LF  +   G
Sbjct: 296 VIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGG 355

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++P+VV ++++I+G    G M+KA++L+  M+  G+ PN    N+L+ G
Sbjct: 356 VVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEG 404



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 67/137 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L   MI+  V  +  VY+++I G    G++  A +L+  M     + ++V Y  
Sbjct: 690 MEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTV 749

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING      +E +  +  EM    I P+V+ YN L  G F    ++ A +L DEM    
Sbjct: 750 LINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKG 809

Query: 121 VAAETSTYNTFIDGLCK 137
           +  + +TY+  ++G  K
Sbjct: 810 LVPDDTTYDILVNGKLK 826


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 130/243 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL D M + G+RPN + Y+ L+ G C   +++ A  L+  +  +G + N V + T
Sbjct: 229 IGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTT 288

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK K   E+ +++ +M   G+ PTV  YN+L  G F     + AL L+ EM    
Sbjct: 289 LIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLG 348

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T +  + GLC  G I  AA     +R     L   AY+ LID  C+ G LE A 
Sbjct: 349 LCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEAL 408

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +  VG+ PNVV+Y+ +I G    G+M  A  ++ +M AKG+ PN VT+  L+ G 
Sbjct: 409 ATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGH 468

Query: 241 IRN 243
            +N
Sbjct: 469 AKN 471



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 133/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   ++  G+ PNA V++TLIDGFC       A+++F  M   G    V  YN+
Sbjct: 264 VNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNS 323

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  ++ D +E+L+LY EM   G+ P   T + +  GL +  Q++ A +  + ++   
Sbjct: 324 LMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDG 383

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    + YN  ID  C+NG + EA      +  +  E  + +YS LIDG  K+GK++ A 
Sbjct: 384 VNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAM 443

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            ++  +   G+ PNVVTY  +IHG   +G +D A     +M   G++PN +T + L+ G 
Sbjct: 444 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGL 503

Query: 241 IRNNETSKVVELL 253
            R N     V  +
Sbjct: 504 CRENRVQDAVRFV 516



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 123/255 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D M++RG+ P+   Y+TLI+     G + +A+E++  M       NV+TY ++I 
Sbjct: 162 AWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMIC 221

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C+   + ++  L+  M   G+RP   TYN L  G  +   V  A  L+ E+ +S +  
Sbjct: 222 VLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIP 281

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               + T IDG CK     EA ++FR +        +  Y+ L+DG  + G  + A  L+
Sbjct: 282 NAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLY 341

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q + R+GL P+  T +I++ G C+ GQ+  A      +   GV  N   +N L+    RN
Sbjct: 342 QEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRN 401

Query: 244 NETSKVVELLHRMDE 258
               + +    RM E
Sbjct: 402 GNLEEALATCTRMTE 416



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 102/198 (51%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N +++G  K +    +  L+ EML +G+ P+VVTYNTL +       V  A +++D+M  
Sbjct: 147 NAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVA 206

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +     TY + I  LC+ G I +A  LF  ++          Y+ L+ G C+   + +
Sbjct: 207 RQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNS 266

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A+ L+Q L   GL+PN V +  +I GFC   +  +A D+F DM   GVAP    +N+LM 
Sbjct: 267 AFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMD 326

Query: 239 GCIRNNETSKVVELLHRM 256
           G  R+ +  + + L   M
Sbjct: 327 GAFRSGDAQEALSLYQEM 344



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 17/242 (7%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+R L+ + + GV  NA  Y+ LID +C  G ++ A      M   G   NVV+Y++LI+
Sbjct: 372 AARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLID 431

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+ K   ++ ++ +Y+EM++KGI P VVTY  L HG  +   ++ A +   EM  + ++ 
Sbjct: 432 GHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISP 491

Query: 124 ETSTYNTFIDGLCKNGYIVEAAEL--------FRTLRVLKCELGIEA---------YSCL 166
              T +  +DGLC+   + +A           +  +         E          Y  L
Sbjct: 492 NAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTL 551

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           I GL   G+   A +LF  + + G++ +  TY ++I G C  G +  A  L+ DM   GV
Sbjct: 552 IYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGV 611

Query: 227 AP 228
            P
Sbjct: 612 KP 613



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 82/169 (48%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P +   N +  GL +  +   A +LFDEM    +     TYNT I+     G + +A E+
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           +  +   + +  +  Y+ +I  LC+ G +  A  LF ++   G+ PN  TYN+++ G C 
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              ++ A  L+ ++   G+ PN V F TL+ G  +    S+  ++   M
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDM 309



 Score = 43.9 bits (102), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           A   L+  L ++G L+ A  +F+   R+  +P +   N ++ G     +   A +LF +M
Sbjct: 113 ALGVLVIALSQMGLLDEALYVFR---RLWTLPALPACNAVLDGLVKARRSRCAWELFDEM 169

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +G+ P+ VT+NTL+  C      +K  E+  +M  R 
Sbjct: 170 LRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQ 208


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 147/294 (50%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA++ L  M+ +G  P+ F Y+T+IDG+C +G +  A EL       G + + VTY +
Sbjct: 296 VQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCS 355

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ--- 117
           LING C   D+E +L L++E  +K ++P +V YN+L  GL     + HAL++ +EM    
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415

Query: 118 -HSDVA-------------------------------AETSTYNTFIDGLCKNGYIVEAA 145
            H D+                                 +  T+NT IDG CK   +  A 
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSAL 475

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L   +        +  Y+ +++GLCK GK +   E F+ +   G  PN +TYNI+I  F
Sbjct: 476 QLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 535

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C   Q+++A  + + M   G+ P+ V+FNTL+ G  RN +      L  ++DE+
Sbjct: 536 CKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEK 589



 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L++ M    V P+   Y+TL+ G C   ++  A +    M   GC+ +  TYNT
Sbjct: 262 LEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNT 320

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK+  ++E+  L  + + KG  P  VTY +L +GL     +E AL+LF+E Q  D
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN+ + GLC+ G I+ A ++   +    C   I  Y+ +I+GLCK+G +  A 
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +       G +P+V T+N +I G+C   ++D A  L   M   G+AP+ +T+N+++ G 
Sbjct: 441 VVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGL 500

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +V E    M
Sbjct: 501 CKAGKAKEVNETFEEM 516



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 133/237 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L +    + ++P+  VY++L+ G C  G I  A ++   M   GC  ++ TYN 
Sbjct: 366 IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNI 425

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++ ++  + ++ + KG  P V T+NTL  G  +  +++ AL+L + M    
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG 485

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  TYN+ ++GLCK G   E  E F  + +  C      Y+ LI+  CKI +LE A 
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 545

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +   + + GL+P+ V++N +IHGFC +G +D A+ LF  ++ KG +    TFN L+
Sbjct: 546 GVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 602



 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ +++  I +G  P+ F ++TLIDG+C   ++D A +L   M   G   +V+TYN+
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNS 495

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK    +E    + EM+ KG RP  +TYN L     +I+Q+E A  +   M    
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++NT I G C+NG +  A  LF+ L         + ++ LI        ++ A 
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 615

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   G  P++ TY I++ G C    +D+A+    +M +KG  P+  TF  ++   
Sbjct: 616 KIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLL 675

Query: 241 IRNNETSKVVELLHRM 256
             N+  S+ V ++H M
Sbjct: 676 AMNHRVSEAVAIIHIM 691



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 133/255 (52%), Gaps = 1/255 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RLL  + +RG       Y T++ G    G    AR LF  M       +V T+N +++
Sbjct: 160 ALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLH 219

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C+  DV ES  L +++L +G+     T N    GL E  ++E A+ L + M  + VA 
Sbjct: 220 ALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG-AYVAP 278

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT + GLCK+  + EAA+    +    C      Y+ +IDG CK G L+ A EL 
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELL 338

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +     G +P+ VTY  +I+G C +G +++A +LF + +AK + P+ V +N+L+ G  R 
Sbjct: 339 KDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 398

Query: 244 NETSKVVELLHRMDE 258
                 +++++ M E
Sbjct: 399 GLILHALQVMNEMVE 413



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 1/259 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++   M+  GV P+A  ++  +  FCLTG    A  L  S+   GC      Y T+
Sbjct: 123 DQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTV 182

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G         + +L+ EML + + P V T+N + H L +   V  +  L  ++    +
Sbjct: 183 VRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGM 242

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +A   T N +I GLC++G + EA  L   +        +  Y+ L+ GLCK  K++ A +
Sbjct: 243 SANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAP-DVVTYNTLMRGLCKDSKVQEAAQ 301

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               +   G +P+  TYN +I G+C  G + +A +L  D   KG  P+ VT+ +L+ G  
Sbjct: 302 YLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLC 361

Query: 242 RNNETSKVVELLHRMDERN 260
              +  + +EL +    ++
Sbjct: 362 AEGDIERALELFNEAQAKD 380



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 110/231 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L++ M   G+ P+   Y+++++G C  G+     E F  M + GC  N +TYN 
Sbjct: 471 LDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNI 530

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +CK   +EE+  +   M   G+ P  V++NTL HG      ++ A  LF ++    
Sbjct: 531 LIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKG 590

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +A   T+N  I        +  A ++F  +     +  +  Y  L+DGLCK   ++ A+
Sbjct: 591 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAY 650

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
                +   G +P++ T+  M++    + ++ +A  +   M   GV P  V
Sbjct: 651 AHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 9/240 (3%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P A  Y+ ++D        D+A +++V M   G   +  T+   +  +C T     +L L
Sbjct: 104 PAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRL 163

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
              +  +G       Y T+  GL+      +A  LFDEM   DV  + +T+N  +  LC+
Sbjct: 164 LRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQ 223

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVG--LMP 193
            G ++E+  L    +VLK  +    ++C   I GLC+ G+LE A  L +   R+G  + P
Sbjct: 224 KGDVMESGALL--AKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVE---RMGAYVAP 278

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VVTYN ++ G C D ++ +A      M  +G  P+  T+NT++ G  ++    +  ELL
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELL 338



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 36/234 (15%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y   I  Y +   +  +++ +  M      P    YN +   L      + A K++  M 
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            + VA +  T+   +   C  G    A  L R+L    C+    AY  ++ GL   G   
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193

Query: 178 TAWELFQSLPRVGLMPNVVTY-----------------------------------NIMI 202
            A  LF  +    + P+V T+                                   NI I
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G C DG++++A  L   M A  VAP+ VT+NTLM G  ++++  +  + L RM
Sbjct: 254 RGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 39/97 (40%)

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y   I    + G+L  A + F+ +      P    YN ++    N    D+AH +++ M 
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A GVAP+  T    +            + LL  + ER
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSER 170


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 133/265 (50%), Gaps = 6/265 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLDLM + G  PN   YS L++G C  G  D+   L   M   G   +V+ YNT
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK++ ++E+L L   M+  G  PTVVTYN+L        QV+ A +L   M    
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK------IG 174
              +   YNT I GLC++  + +A  L + +   +C   +  YS +IDGLCK        
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADW 331

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           KLE A E+ + + + G  PN  TY ++I G C   +  +A  L   M    V P+  +F+
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFS 391

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
            ++    ++++     ++   M ER
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSER 416



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 1/244 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN F Y +LI G C  G++D+A EL   M   G    V  +N +I G CK     ++L  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HSDVAAETSTYNTFIDGLC 136
           +  +      P ++T+N L   L +  +VE A ++F+ M   S       TY T I+GLC
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K+G +  A EL   +    C   +  YS L++GLCK G+ +  + L Q + R G  P+V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            YN +++G C   ++D+A +L   M   G  P  VT+N+LM    R+ +  +   L+  M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 257 DERN 260
            ER 
Sbjct: 268 SERG 271



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 130/245 (53%), Gaps = 6/245 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   Y+T+I+G C  G++DRA EL   M+  GC  NV+TY+ L+ G CK    ++   L
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTL 193

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EM  +G +P V+ YNTL +GL +  +++ AL+L   M  S       TYN+ ++  C+
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           +  +  A  L + +    C   +  Y+ +I GLC+  +L+ A  L + +     +P+V+T
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313

Query: 198 YNIMIHGFCNDGQMD------KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           Y+ +I G C D ++D       A ++   M+  G  PN  T+  ++ G  R  ++ + + 
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373

Query: 252 LLHRM 256
           LL RM
Sbjct: 374 LLRRM 378



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LLD M  RG+ P   V++ +I G C  G    A   F ++    C  +++T+N 
Sbjct: 46  LDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNI 105

Query: 61  LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L++   K+  VEE+  ++  M  S    P VVTY T+ +GL +  +++ A++L D M  +
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TY+  ++GLCK G   +   L + +     +  +  Y+ L++GLCK  +L+ A
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            EL Q + R G  P VVTYN ++  FC   Q+D+A  L   M  +G  P+ + +NT++ G
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAG 285

Query: 240 CIRNNETSKVVELLHRM 256
             R+        LL +M
Sbjct: 286 LCRDARLDDAQALLKQM 302



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+   LL  M +RG +P+  +Y+TL++G C +  +D A EL   M  +GC   VVTYN+L
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +  +C++K V+ +  L   M  +G  P V+ YNT+  GL    +++ A  L  +M  +  
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307

Query: 122 AAETSTYNTFIDGLCKNGYI-----VEAA-ELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
             +  TY+T IDGLCK+  +     +EAA E+   ++   C      Y+ +I+GLC+  K
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            + A  L + +    ++P++ +++++I   C    +D A+ +F  M  +   PN V +  
Sbjct: 368 SQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAA 427

Query: 236 LMLGCIRNNETSKVVELLHRMDE 258
           L+ G  +  E  K V +   M E
Sbjct: 428 LIDGLSKGGEVDKAVRVFELMVE 450



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 118/223 (52%), Gaps = 1/223 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLN 76
           P+   ++ L+D    +G ++ A ++F SM  +  C+ NVVTY T+ING CK   ++ ++ 
Sbjct: 98  PDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE 157

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L   M   G  P V+TY+ L  GL +  + +    L  EM       +   YNT ++GLC
Sbjct: 158 LLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLC 217

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K+  + EA EL + +    C   +  Y+ L++  C+  +++ A+ L Q +   G  P+V+
Sbjct: 218 KSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            YN +I G C D ++D A  L   M A    P+ +T++T++ G
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 113/207 (54%), Gaps = 1/207 (0%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C+ N  TY +LI+G CK   ++++  L  EM  +GI P V  +N +  GL +  +   AL
Sbjct: 26  CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDAL 85

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV-LKCELGIEAYSCLIDG 169
             F  +  +    +  T+N  +D L K+G + EA ++F ++    +C   +  Y+ +I+G
Sbjct: 86  GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK GKL+ A EL   +   G  PNV+TY++++ G C  G+ DK   L  +M  +G  P+
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            + +NTL+ G  ++    + +EL+  M
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLM 232



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 7/266 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+ +M +RG  P+   Y+T+I G C    +D A+ L   M    C+ +V+TY+T
Sbjct: 257 VDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316

Query: 61  LINGYCKTKDVEESLNLYS-----EMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           +I+G CK   V+    L +     EM+ + G  P   TY  +  GL    + + AL L  
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            M  S+V  + S+++  I  LCK+  +  A ++F  +   +C+    AY+ LIDGL K G
Sbjct: 377 RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +++ A  +F+ +      P V TYN ++ G C  G++++A  +   M  K   P+  ++ 
Sbjct: 437 EVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYG 495

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+ G  R +   +  EL   ++ + 
Sbjct: 496 ALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 7/243 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR------ARELFVSMDINGCMHN 54
           +D+A  LL  M+     P+   YST+IDG C    +D       A E+   M   GC  N
Sbjct: 292 LDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
             TY  +I G C+ +  +++L L   M+   + P + +++ +   L + H ++ A K+F 
Sbjct: 352 AGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFG 411

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            M   +       Y   IDGL K G + +A  +F  L V     G+  Y+ ++DGLC +G
Sbjct: 412 MMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGLCGVG 470

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           ++E A  + + +      P+  +Y  +I G C    +++A++LF  +EAKG A     +N
Sbjct: 471 RIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530

Query: 235 TLM 237
            L+
Sbjct: 531 VLV 533



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 1/215 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L++M Q G  PNA  Y+ +I+G C   +  +A  L   M  +  + ++ +++ 
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK+ D++ +  ++  M  +  +P  V Y  L  GL +  +V+ A+++F+ M  S 
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES- 451

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                +TYN+ +DGLC  G I EA  +   +   +C     +Y  LI GLC++  +E A+
Sbjct: 452 FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAY 511

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           ELFQ++   G    V  YN++++  C   ++  AH
Sbjct: 512 ELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 1/188 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  MI   V P+   +S +I   C + ++D A ++F  M    C  N V Y  LI
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALI 429

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K  +V++++ ++ E++ +  RP V TYN++  GL  + ++E A+++ + M H +  
Sbjct: 430 DGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECF 488

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + ++Y   I GLC+   + EA ELF+ +      + +  Y+ L++ LCK  +L  A  +
Sbjct: 489 PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGV 548

Query: 183 FQSLPRVG 190
              L   G
Sbjct: 549 ANKLIEAG 556



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 47/87 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+++ MI +   P+   Y  LI G C    ++ A ELF +++  G    V  YN 
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNV 531

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR 87
           L+N  CK K + ++  + ++++  G +
Sbjct: 532 LVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA RLL  M+   + P ++ YSTL+DGFC  G + +A  ++  M   G   NVVT+N+
Sbjct: 375 VSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNS 434

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+    E++L+++  ML +G+ P  V+Y TL   LF++ +   AL L++++    
Sbjct: 435 LLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARG 494

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T  +NT I+G CK   ++EA E F  ++ L  E     Y  LIDG CK+G +E A+
Sbjct: 495 YGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAF 554

Query: 181 ELFQS------LPRV-----------------------------GLMPNVVTYNIMIHGF 205
           ++ +       LP +                             GL PNVVTY  +I G+
Sbjct: 555 KVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGW 614

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C++G++DKA   + DM  KG APN +  + ++    R     +   LL +M
Sbjct: 615 CDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 665



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF---VSMDI------------------- 48
           MI++G  PN  + S ++      G ID A  L    V++D+                   
Sbjct: 630 MIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLD 689

Query: 49  -------------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
                        +  + N V YN  I G CK+  V+++  ++S +L +G  P   TY T
Sbjct: 690 SQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCT 749

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L HG      V  A  L DEM    +A    TYN  I+GLCK+G +  A +LF  L +  
Sbjct: 750 LIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKG 809

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
               + +Y+ LIDG CK G    A +L   + + G+ P+++TY+ +I+GFC  G M KA 
Sbjct: 810 LAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKAT 869

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +L  +M       N   F  L+ G ++  E  K+ +L + M
Sbjct: 870 NLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 144/326 (44%), Gaps = 70/326 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA    + M + G  P+   Y TLIDG+C  G ++ A ++   M+    + ++  YN+
Sbjct: 515 MIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNS 574

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  K+K   E ++L SEM  KG+ P VVTY TL  G  +  +++ A   + +M    
Sbjct: 575 LIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKG 634

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-------------RVLKCELG-------- 159
            A      +  +  L + G I EA  L + +             R+ K + G        
Sbjct: 635 FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIA 694

Query: 160 --------------IEAYSCLIDGLCKIGKLETAWELFQSL------P------------ 187
                            Y+  I GLCK GK++ A ++F SL      P            
Sbjct: 695 DTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGY 754

Query: 188 -----------------RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
                            + GL PN++TYN +I+G C  G +D+A  LF  +  KG+APN 
Sbjct: 755 SAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNV 814

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
           +++N L+ G  +N  T + ++L ++M
Sbjct: 815 ISYNILIDGYCKNGNTREALDLRNKM 840



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 147/328 (44%), Gaps = 70/328 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++ + M +  + P+  +Y++LI G   + +     +L   M + G   NVVTY T
Sbjct: 550 VEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGT 609

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    ++++   Y +M+ KG  P V+  + +   L+ + +++ A  L  +M + D
Sbjct: 610 LIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLD 669

Query: 121 V-----------------------------------AAETSTYNTFIDGLCKNGYIVEAA 145
           V                                      +  YN  I GLCK+G + +A 
Sbjct: 670 VFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAK 729

Query: 146 ELFRTL---------------------------------RVLKCELG--IEAYSCLIDGL 170
           ++F +L                                  +LK  L   I  Y+ LI+GL
Sbjct: 730 KIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGL 789

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK G L+ A +LF  L   GL PNV++YNI+I G+C +G   +A DL   M  +G++P+ 
Sbjct: 790 CKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSL 849

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +T++ L+ G  +  +  K   LL  M E
Sbjct: 850 ITYSALIYGFCKQGDMGKATNLLDEMRE 877



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 137/259 (52%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYN 59
           M+ A  +L LM +RG+  N    + LI G+C   +++ A ++   M+ + G + +   Y 
Sbjct: 269 MERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYG 328

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+GYC+   +++++ L  EML+ G+R  +   N L +G  +  QV  A +L   M   
Sbjct: 329 VLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDW 388

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           D+  E+ +Y+T +DG C+ G + +A  ++  +  +  +  +  ++ L+ GLC++G  E A
Sbjct: 389 DLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDA 448

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             ++  + + G+ P+ V+Y  ++      G+  +A  L+ D+ A+G   +   FNT++ G
Sbjct: 449 LHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMING 508

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  +  +  E  +RM E
Sbjct: 509 FCKMEKMIEAEETFNRMKE 527



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 92/153 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L D M++RG+ PN   Y+ LI+G C +G +DRA++LF  + + G   NV++YN 
Sbjct: 760 VNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNI 819

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  +  E+L+L ++ML +GI P+++TY+ L +G  +   +  A  L DEM+   
Sbjct: 820 LIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELF 879

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
                + +   ++G  K G + + A+L   + +
Sbjct: 880 ADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHI 912



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 119/246 (48%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P+ F  S +++ +C  G ++ A +    MD  G   NVVTYN+LI+G     D+E +
Sbjct: 213 GIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERA 272

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFID 133
             +   M  +GI    VT   L  G     ++E A K+  EM+ S+ +  +   Y   ID
Sbjct: 273 EMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLID 332

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G C+   + +A  L   +  +   + +   + LI+G CK G++  A  L   +    L P
Sbjct: 333 GYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEP 392

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
              +Y+ ++ GFC +G + KA  ++ +M   G+  N VT N+L+ G  R       + + 
Sbjct: 393 ESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVW 452

Query: 254 HRMDER 259
           H M +R
Sbjct: 453 HLMLKR 458



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 1/254 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D M + G  P+    + L+      GE   A  ++  ++  G + +V T + ++N
Sbjct: 167 ALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVN 226

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            YCK   V  +++   EM   G    VVTYN+L  G   I  +E A  +   M    +  
Sbjct: 227 AYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILR 286

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              T    I G C+   + EA ++ R + R     L   AY  LIDG C++ K++ A  L
Sbjct: 287 NKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRL 346

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +  VGL  N+   N +I+G+C +GQ+ +A  L + M    + P   +++TLM G  R
Sbjct: 347 RDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCR 406

Query: 243 NNETSKVVELLHRM 256
               +K + + + M
Sbjct: 407 EGLVTKAISVYNEM 420



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 100/201 (49%), Gaps = 1/201 (0%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            ++ ++  YC+   ++ +L+++  M   G  P++ + N L   L    +  +A+ ++D +
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI 209

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               +  +  T +  ++  CK+G++  A +  + +  L  EL +  Y+ LIDG   IG +
Sbjct: 210 NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDM 269

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME-AKGVAPNCVTFNT 235
           E A  + + +   G++ N VT  ++I G+C   ++++A  +  +ME ++G+  +   +  
Sbjct: 270 ERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGV 329

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+ G  R  +    V L   M
Sbjct: 330 LIDGYCRVCKMDDAVRLRDEM 350



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 98/201 (48%), Gaps = 15/201 (7%)

Query: 62  INGYCKTKDVEESLNLYSEM---LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           +N +CK   +     +Y E    L++ + P+   Y++L             +++F++ + 
Sbjct: 94  VNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLV-------VWNELVRVFEDFKF 146

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S      + ++  +   C+ G I  A  +F  +  L C   + + + L+  L + G+   
Sbjct: 147 S-----PTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSN 201

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  ++  + R+G++P+V T +IM++ +C DG ++ A D   +M+  G   N VT+N+L+ 
Sbjct: 202 AILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLID 261

Query: 239 GCIRNNETSKVVELLHRMDER 259
           GC+   +  +   +L  M ER
Sbjct: 262 GCVSIGDMERAEMVLKLMGER 282


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 141/258 (54%), Gaps = 1/258 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DE+  +   M +     + + YSTLI G C +G +D A  ++  M  NG   +VV YNT+
Sbjct: 247 DESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 306

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NGY +   +EE L L+  M  +G R TVV+YN L  GLFE  +V+ A+ +++ +   D 
Sbjct: 307 LNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDC 365

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A++ TY   + GLCKNGY+ +A  +       + +L   AYS +I+GLC+ G+L+    
Sbjct: 366 CADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAG 425

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   + + G  PN    N +I+GF    +++ A   F +M +KG  P  VT+NTL+ G  
Sbjct: 426 VLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 485

Query: 242 RNNETSKVVELLHRMDER 259
           +    S+   L+  M ++
Sbjct: 486 KAERFSEAYALVKEMLQK 503



 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 133/239 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE + +LD M + G +PN +V + +I+GF    +++ A   F +M   GC   VVTYNT
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K +   E+  L  EML KG +P ++TY+ L +GL +  +++ AL L+ +     
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 539

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC +G + +A +L+  ++   C   +  ++ L++G  K+   E A 
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERAS 599

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +++  + + GL P++++YNI + G C+  ++  A     D   +GV P  +T+N L+ G
Sbjct: 600 KIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 133/245 (54%), Gaps = 1/245 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G +P    Y++L++    + + D A   F+  +  G   N+ TYN LI   C+ K  +++
Sbjct: 84  GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M  +G  P V +Y TL + L +   +  ALKLFDEM    V  + + YN  IDG
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 203

Query: 135 LCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
             K G I+ A+E++ R L+       I +Y+ +I+GLCK GK + ++E++  + +     
Sbjct: 204 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 263

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++ TY+ +IHG C  G +D A  ++ +M   GV+P+ V +NT++ G +R     + +EL 
Sbjct: 264 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 323

Query: 254 HRMDE 258
             M++
Sbjct: 324 KVMEK 328



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 6/262 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA          G+ PN   Y+ LI   C   + D+A+EL   M   G   +V +Y TL
Sbjct: 106 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTL 165

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSD 120
           IN   K   + ++L L+ EM  +G+ P V  YN L  G F+   + +A ++++ + +   
Sbjct: 166 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 225

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG--IEAYSCLIDGLCKIGKLET 178
           V     +YN  I+GLCK G   E+ E++   R+ K E G  +  YS LI GLC  G L+ 
Sbjct: 226 VYPNIPSYNVMINGLCKCGKFDESFEIWH--RMKKNERGQDLYTYSTLIHGLCGSGNLDG 283

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +++ +   G+ P+VV YN M++G+   G++++  +L+  ME +G     V++N L+ 
Sbjct: 284 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIR 342

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G   N +  + + +   + E++
Sbjct: 343 GLFENAKVDEAISIWELLPEKD 364



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 123/241 (51%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + F YS++I+G C  G +D    +   M  +GC  N    N +ING+ +   +E++L  +
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M+SKG  PTVVTYNTL +GL +  +   A  L  EM          TY+  ++GLC+ 
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             +  A  L+        +  ++ ++ +I GLC  GK+E A +L+  + +   +PN+VT+
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N ++ GF      ++A  ++  +   G+ P+ +++N  + G    +  S  V  L+   +
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 642

Query: 259 R 259
           R
Sbjct: 643 R 643



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 119/239 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + +L+ ++    ++  Y  L+ G C  G +++A  +    +      +   Y++
Sbjct: 350 VDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSS 409

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+   ++E   +  +M   G +P     N + +G     ++E AL+ F  M    
Sbjct: 410 MINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKG 469

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT I+GL K     EA  L + +     +  +  YS L++GLC+  KL+ A 
Sbjct: 470 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMAL 529

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L+      G  P+V  +NI+IHG C+ G+++ A  L+ +M+ +   PN VT NTLM G
Sbjct: 530 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEG 588



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 1/125 (0%)

Query: 136 CKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            KN    +A ++F+ +  +  C+ GI +Y+ L++ L +  K + A   F     +GL PN
Sbjct: 64  AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPN 123

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           + TYNI+I   C   Q DKA +L   M  +G +P+  ++ TL+    +N   S  ++L  
Sbjct: 124 LQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 183

Query: 255 RMDER 259
            M ER
Sbjct: 184 EMPER 188



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 37/80 (46%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + AS++ D ++Q G++P+   Y+  + G C    I  A          G +   +T+N L
Sbjct: 596 ERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNIL 655

Query: 62  INGYCKTKDVEESLNLYSEM 81
           + GY   K   E + + + M
Sbjct: 656 VQGYLALKGYMEPVFVPASM 675


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LLD M   G++PN  VY TL+DGF   G+   A ++   M   G   N + Y+ 
Sbjct: 329 LKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDN 388

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK   +  +  L  EM+  G+RP   TYN L  G F+ H  + A +L +EM++S 
Sbjct: 389 LIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSG 448

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--------------------RVLKCELGI 160
           +     +Y   I+GLC+NG   EA  L   +                    +     L  
Sbjct: 449 ILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLAC 508

Query: 161 EA---------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EA               Y+ LI GL  +G++E A E +  + + GL+P+  TY+ +IHG+
Sbjct: 509 EALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 568

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C  G ++KA  L   M   G+ PN  T+  L+ G  ++N+  KV  +L  M
Sbjct: 569 CKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 131/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA      + +RG+ P+ F YS LI G+C TG +++A +L   M  +G   N  TY  
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GY K+ D E+  ++   ML  G +P    Y  +   L     +E A  +  E++ + 
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 658

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y++ I GLCK   + +A  L   +     E GI  Y+ LIDG C+ G +  A 
Sbjct: 659 LVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 718

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F S+   GL+PN VTY  +I G C +G +  A DL+ +M  +G+AP+   +N L  GC
Sbjct: 719 NVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGC 778

Query: 241 IRNNETSKVVELLHRMDER 259
               +  + + L   M  R
Sbjct: 779 SDAADLEQALFLTEEMFNR 797



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 126/259 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A ++ + M +R    N   Y+ +I G C +G ++ A      M   G   +  TY  L
Sbjct: 260 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGAL 319

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG CK   ++E+  L  EM   G++P +V Y TL  G  +  +   A  +  EM  + V
Sbjct: 320 MNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGV 379

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 Y+  I GLCK G +  A++L + +  +        Y+ L+ G  +    + A+E
Sbjct: 380 QPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFE 439

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G++PNV +Y IMI+G C +G+  +A +L  +M ++G+ PN   +  L++G  
Sbjct: 440 LLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHS 499

Query: 242 RNNETSKVVELLHRMDERN 260
           +    S   E L +M + N
Sbjct: 500 KEGNISLACEALEKMTKAN 518



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 122/253 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A++++ +M   G+ P     + L+        ++   +L   M+  G + +V TY+T I 
Sbjct: 192 AAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIE 251

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK +D + +  ++ EM  +      VTYN +  GL     VE A    +EM    ++ 
Sbjct: 252 AHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSP 311

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY   ++GLCK   + EA  L   +     +  I  Y  L+DG  K GK   A+++ 
Sbjct: 312 DAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDIL 371

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ PN + Y+ +I G C  GQ+ +A  L  +M   G+ P+  T+N LM G  + 
Sbjct: 372 KEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQ 431

Query: 244 NETSKVVELLHRM 256
           ++     ELL+ M
Sbjct: 432 HDKDGAFELLNEM 444



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 36/238 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  LLD M + G+ P    Y+ LIDGFC +G+I RAR +F S+   G + N VTY  
Sbjct: 679 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTA 738

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  D+ ++ +LY EML +GI P    YN L  G  +   +E AL L +EM +  
Sbjct: 739 LIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 798

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A   S +NT                                   L+ G CK GKL+   
Sbjct: 799 YA-NVSLFNT-----------------------------------LVHGFCKRGKLQETE 822

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           +L   +    ++PN  T   ++  F   G++ +AH +F +++ K  + +     +L+ 
Sbjct: 823 KLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLF 880



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  AS+LL  MI+ G+RP+ F Y+ L+ G     + D A EL   M  +G + NV +Y  
Sbjct: 399 LGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGI 458

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY--------------------------- 93
           +ING C+  + +E+ NL  EM+S+G++P    Y                           
Sbjct: 459 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN 518

Query: 94  --------NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                   N+L  GL  + ++E A + + ++Q   +  +  TY+  I G CK G + +A 
Sbjct: 519 VHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKAD 578

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L R +     +   + Y+ L++G  K    E    + QS+   G  P+   Y I+I   
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL 638

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
                M+ A  +  ++E  G+ P+   +++L+ G  +  +  K V LL  M
Sbjct: 639 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEM 689



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 97/198 (48%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           + L++ Y KT  V  +  +   M   G+ PT    N L   L     +E   KL   M+ 
Sbjct: 177 DVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEG 236

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + +  +  TY+TFI+  CK      A ++F  +R   C +    Y+ +I GLC+ G +E 
Sbjct: 237 AGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 296

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A+   + +   GL P+  TY  +++G C   ++ +A  L  +M   G+ PN V + TL+ 
Sbjct: 297 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVD 356

Query: 239 GCIRNNETSKVVELLHRM 256
           G ++  +T++  ++L  M
Sbjct: 357 GFMKEGKTAEAFDILKEM 374


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 139/256 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +++ M   G  P+   Y+T+IDG+C  G++ +A  L   M       N +T+N LI
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C+ ++V  +  ++ EM  +G++P VVTYN+L +GL    +++ AL L D+M    + 
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I+G CK   + EA E+   +        +  ++ LID   K G+++ A+ L
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ PNV TYN +I GFC +G + +A  L  +ME  G+  + VT+N L+    +
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCK 486

Query: 243 NNETSKVVELLHRMDE 258
             ET K V LL  M E
Sbjct: 487 KGETRKAVRLLDEMFE 502



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 131/247 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+R +  N   +  +I+G C  G+  +A ++   M   G   +V+TYNT+I+GYCK   
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + ++  L  EM++K I P  +T+N L  G      V  A K+F+EMQ   +     TYN+
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+GLC NG + EA  L   +  +  +  +  Y+ LI+G CK   L+ A E+   + + G
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L PNV+T+N +I  +   G+MD A  L   M   GV PN  T+N L++G  R     +  
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEAR 459

Query: 251 ELLHRMD 257
           +L   M+
Sbjct: 460 KLAKEME 466



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 138/256 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ + M ++G++PN   Y++LI+G C  G++D A  L   M   G   NVVTYN LIN
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K ++E+  +  ++  +G+ P V+T+NTL     +  +++ A  L   M  + V  
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             STYN  I G C+ G + EA +L + +     +  +  Y+ L+D LCK G+   A  L 
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +  VGL P+ +TYN +I G+  +G    A ++   ME KG   N VT+N L+ G    
Sbjct: 498 DEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNK 557

Query: 244 NETSKVVELLHRMDER 259
            +  +   LL+ M E+
Sbjct: 558 GKLEEANRLLNEMLEK 573



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 142/263 (53%), Gaps = 8/263 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  LL  M+ + + PN   ++ LIDGFC    +  A+++F  M   G   NVVTYN+
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    ++E+L L  +M   G++P VVTYN L +G  +   ++ A ++ D++    
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG----IEAYSCLIDGLCKIGKL 176
           +A    T+NT ID   K G + +A      LR +  + G    +  Y+CLI G C+ G +
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAF----LLRSMMLDTGVCPNVSTYNCLIVGFCREGNV 455

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A +L + +   GL  ++VTYNI++   C  G+  KA  L  +M   G+ P+ +T+N L
Sbjct: 456 KEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNAL 515

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G  R   ++  + +   M+++
Sbjct: 516 IDGYFREGNSTAALNVRTLMEKK 538



 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 127/236 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L D M   G++PN   Y+ LI+GFC    +  ARE+   +   G   NV+T+NT
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y K   ++++  L S ML  G+ P V TYN L  G      V+ A KL  EM+ + 
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TYN  +D LCK G   +A  L   +  +        Y+ LIDG  + G    A 
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            +   + + G   N+VTYN++I GFCN G++++A+ L  +M  KG+ PN  T++ L
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 126/241 (52%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N+ +   L+  +   GE+D A E F      G   + ++ N ++    K   +    ++Y
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM+ + I   VVT++ + +GL ++ + + A  + ++M+    +    TYNT IDG CK 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + +A  L + +   +       ++ LIDG C+   +  A ++F+ + R GL PNVVTY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I+G C++G++D+A  L   M   G+ PN VT+N L+ G  +     +  E+L  + +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 259 R 259
           R
Sbjct: 398 R 398



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 35/178 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN- 59
           MD+A  L  +M+  GV PN   Y+ LI GFC  G +  AR+L   M+ NG   ++VTYN 
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479

Query: 60  ----------------------------------TLINGYCKTKDVEESLNLYSEMLSKG 85
                                              LI+GY +  +   +LN+ + M  KG
Sbjct: 480 LVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            R  +VTYN L  G     ++E A +L +EM    +    +TY+   D + + G+I +
Sbjct: 540 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 135/250 (54%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L+  M + GV PN + Y+ L+  +C TGE   AR LF  M + G + NVV+YN LI G C
Sbjct: 95  LVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLC 154

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   ++++  L+  M  +GI P++VT+N L  G  +  ++ +AL  F++M+ + +     
Sbjct: 155 RHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVV 214

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G C+   I  A   F  ++  +       Y+ LI    K  +++ A+E+   +
Sbjct: 215 TYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEM 274

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL  +V +Y +++H  C +G+M  A  LF  M++KGV PN V ++ ++ G  R   +
Sbjct: 275 EKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSS 334

Query: 247 SKVVELLHRM 256
            K + L+  M
Sbjct: 335 YKALRLIMEM 344



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 128/232 (55%), Gaps = 1/232 (0%)

Query: 3   EASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +++RLL D M  +GV  N   Y+ LI G C  G++  A +LF +M   G   ++VT+N L
Sbjct: 125 KSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLL 184

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K   +  +L+ +++M + G++P+VVTYN L  G      + HA++ F +M+   +
Sbjct: 185 IDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRL 244

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    TY   I    K   +  A E+   +     E+ +++Y  L+  LC  GK+  A +
Sbjct: 245 APTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARK 304

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           LFQS+   G+ PN V Y++MI+G+  +G   KA  L ++M   G+ PN  ++
Sbjct: 305 LFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASY 356



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 117/235 (49%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + L+ G C +G++  AR +F  M   G   N VTY  LI+GY      E    L  EM  
Sbjct: 42  TALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRR 101

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G+ P + TYN L        + + A  LFDEM    V     +YN  I GLC++G + +
Sbjct: 102 GGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKD 161

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           AA+LF  +R       +  ++ LIDG  K GK+  A   F  +   GL P+VVTYN +I 
Sbjct: 162 AAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIG 221

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           GFC    +  A   F DM+ + +AP  VT+  L+    + NE  +  E+L  M++
Sbjct: 222 GFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEK 276



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 119/226 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A++L + M + G+ P+   ++ LIDG+   G++  A   F  M   G   +VVTYN 
Sbjct: 159 LKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNE 218

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+ +D+  ++  +S+M  + + PT VTY  L     + ++++ A ++  EM+ + 
Sbjct: 219 LIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAG 278

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y   +  LC  G ++ A +LF+++     +     Y  +I G  + G    A 
Sbjct: 279 LEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKAL 338

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   + + GL+PNV +Y + I   CN+G+  +A  L  DME  G+
Sbjct: 339 RLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGL 384



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 1/232 (0%)

Query: 30  FCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
            C   E+  A  +      +G    +V     L++G C++ DV E+  ++  M   G+ P
Sbjct: 12  LCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTP 71

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
             VTY  L HG F   Q E    L  EM+   V     TYN  +   C+ G    A  LF
Sbjct: 72  NEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLF 131

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             + +      + +Y+ LI GLC+ GKL+ A +LF+++ R G+ P++VT+N++I G+   
Sbjct: 132 DEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKA 191

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G+M  A   F  M+A G+ P+ VT+N L+ G  R  + +  +     M ER 
Sbjct: 192 GKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERR 243



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 61/137 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  +L  M + G+  +   Y  L+   C+ G++  AR+LF SMD  G   N V Y+ 
Sbjct: 264 MDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDM 323

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GY +     ++L L  EM   G+ P V +Y      L    + + A  L  +M+ + 
Sbjct: 324 MIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAG 383

Query: 121 VAAETSTYNTFIDGLCK 137
           +    S      D   +
Sbjct: 384 LQTSESICRVLFDAKAR 400



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A +L   M  +GV+PN  +Y  +I G+   G   +A  L + M  +G + NV +Y  
Sbjct: 299 MMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCL 358

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
            I   C     +E+  L  +M   G++ +      LF     +H 
Sbjct: 359 TIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFDAKARLHS 403


>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 418

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ +   ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 129/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++A
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSA 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L  +++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 116/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++ + +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 376

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ +L++ + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L     + G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G++  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 125/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G I  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 133/254 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 128/258 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M +R   P+ + Y TL+DG C    ID A  L   M   GC  + V YN 
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  D+     L   M  KG  P  VTYNTL HGL    +++ A+ L + M  S 
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GL K     +A  L  ++      L    YS LI GL K GK E A 
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +   G  PN+V Y++++ G C +G+ ++A ++   M A G  PN  T+++LM G 
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442

Query: 241 IRNNETSKVVELLHRMDE 258
            +     + V++   MD+
Sbjct: 443 FKTGLCEEAVQVWKEMDK 460



 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 128/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD M   G  P+  +Y+ LIDG C  G++ R  +L  +M + GC+ N VTYNT
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++++++L   M+S    P  VTY TL +GL +  +   A++L   M+   
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y+  I GL K G   EA  L+R +    C+  I  YS L+DGLC+ GK   A 
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+   +   G +PN  TY+ ++ GF   G  ++A  ++ +M+  G + N   ++ L+ G
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 38/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +   ++L+D M  +G  PN   Y+TLI G CL G++D+A  L   M  + C+ N VTY T
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332

Query: 61  LINGYCKTK-----------------------------------DVEESLNLYSEMLSKG 85
           LING  K +                                     EE+++L+ +M  KG
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +P +V Y+ L  GL    +   A ++ + M  S       TY++ + G  K G   EA 
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++++ +    C      YS LIDGLC +G+++ A  ++  +  +G+ P+ V Y+ +I G 
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512

Query: 206 CNDGQMDKAHDLFLDM---EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G MD A  L+ +M   E     P+ VT+N L+ G     + S+ V+LL+ M +R
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 7/240 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RLL  M +RG   N  +YS LI G    G+ + A  L+  M   GC  N+V Y+ L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+     E+  + + M++ G  P   TY++L  G F+    E A++++ EM  +  +
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                Y+  IDGLC  G + EA  ++  +  +  +    AYS +I GLC IG ++ A +L
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524

Query: 183 F-----QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +     Q  P+    P+VVTYNI++ G C    + +A DL   M  +G  P+ +T NT +
Sbjct: 525 YHEMLCQEEPKS--QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 114/228 (50%), Gaps = 5/228 (2%)

Query: 37  DRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG----IRPTVV 91
           D+A +LF  M D   C  +V ++N+++N           L  Y  +++      I P  +
Sbjct: 129 DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           ++N +   L ++  V+ A+++F  M       +  TY T +DGLCK   I EA  L   +
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
           +   C      Y+ LIDGLCK G L    +L  ++   G +PN VTYN +IHG C  G++
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           DKA  L   M +    PN VT+ TL+ G ++    +  V LL  M+ER
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 99/206 (48%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N +++N +I   CK + V+ ++ ++  M  +   P   TY TL  GL +  +++ A+ L 
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           DEMQ    +     YN  IDGLCK G +    +L   + +  C      Y+ LI GLC  
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GKL+ A  L + +     +PN VTY  +I+G     +   A  L   ME +G   N   +
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           + L+ G  +  +  + + L  +M E+
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEK 391



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 17/218 (7%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA ++   M + G   N F YS LIDG C  G +  A  ++  M   G   + V Y+++
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508

Query: 62  INGYCKTKDVEESLNLYSEMLSK---GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           I G C    ++ +L LY EML +     +P VVTYN L  GL     +  A+ L + M  
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                +  T NTF++ L +                  C+ G      L+  L K  ++  
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSN--------------SCDKGRSFLEELVVRLLKRQRVSG 614

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           A  + + +    L P   T+ +++   C   +++ A D
Sbjct: 615 ACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 128/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y ++LS+G  P ++TYNTL  GL +   ++ A  L DEM   +
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKE 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++I+ FC  G +     L  +M   G  P  VT
Sbjct: 367 KMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + D + + G+RP+   ++TL+ G+   G++D    L  +M  +G   +V TY+ 
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++E+  L++EML  G+ P  VT+ TL  G  +  +V+ A++++ ++    
Sbjct: 212 LINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYNT I GLCK G + +A +L   + + + +     Y+ LIDG CK G LETA+
Sbjct: 272 FSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAF 331

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E  + + +  +  + V Y  +I G C +G+   A  +   M + G+ P+  T+  ++   
Sbjct: 332 EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEF 391

Query: 241 IRNNETSKVVELLHRM 256
            +  +     +LL  M
Sbjct: 392 CKKGDVKTGSKLLKEM 407



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 132/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  GE+  A+ +F ++   G   +VV++NTL++GY +  D
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGD 186

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G++P V TY+ L +GL +  +++ A +LF+EM  + +     T+ T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTT 246

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ L        +  Y+ LI GLCK G L+ A +L   +    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKE 306

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 367 KMLRGM 372



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL  G   +  ++   +L   M 
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + EA ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ L   G  P+++TYN +I G C  G + +A DL  +M  K + P+ +T+ TL+
Sbjct: 259 LAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKEN 341



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS +   +++ +G  R + +V+S LI  +  +G I  A E F     +       T  
Sbjct: 46  DSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++    K K  +     Y E+L  G   ++  +N L H   +  ++  A  +FD +   
Sbjct: 106 KVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT + G  + G + E   L   +     +  +  YS LI+GLCK  K++ A
Sbjct: 166 GLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ELF  +   GL+PN VT+  +I G C +G++D A +++  + ++G +P+ +T+NTL+ G
Sbjct: 226 NELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFG 285

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  +  +L+  M
Sbjct: 286 LCKKGDLKQARDLIDEM 302


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 127/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A +LF  M   G + N VT+ T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   ++ ++ +Y +MLS+G  P  +TYNTL +GL +   +  A  L DEM    
Sbjct: 247 LIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   +Y+ LI GLCK G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY I++H FC +G +     L  +M+  G  P  +T
Sbjct: 367 KMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 138/253 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++E+  L+ EML +G+ P  VT+ TL  G  +  +++ A++++ +M     + 
Sbjct: 215 GLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + +  +  + V+Y  +I G C +G+   A  +  +M + G+ P+  T+  +M    +N
Sbjct: 335 KRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKN 394

Query: 244 NETSKVVELLHRM 256
            +     +LL  M
Sbjct: 395 GDVKMGSKLLKEM 407



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 126/236 (53%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           + ++ L+D FC  GEI  A+ +F  +   G   +VV++NTL+NGY K  D++E   L S 
Sbjct: 137 YFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSA 196

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M + G++P V TY+ L +GL +  +++ A KLFDEM    +     T+ T IDG CKNG 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGK 256

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           +  A E+++ +           Y+ LI GLCK G L  A +L   +   GL P+ +TY  
Sbjct: 257 LDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTT 316

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +I G C +G ++ A +    M  + +  + V++  L+ G  +   +    ++L  M
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREM 372



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL +G  ++  ++   +L   M 
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + EA +LF  +           ++ LIDG CK GKL+
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +   G  P+ +TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKEN 341



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS +   +++ +G  R + +V+S LI  +  +G +  A E F     N       T  
Sbjct: 46  DSASAVFATILETKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++    K K  +   + Y E+L      ++  +N L     +  ++  A  +FD +   
Sbjct: 106 KVLEHLMKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT ++G  K G + E   L   +     +  +  YS LI+GLCK  K++ A
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LF  +   GL+PN VT+  +I G C +G++D A +++  M ++G +P+ +T+NTL+ G
Sbjct: 226 HKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  +  +L   M
Sbjct: 286 LCKKGDLXQAKDLXDEM 302



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 103/244 (42%), Gaps = 38/244 (15%)

Query: 51  CMHNVVT-YNTLINGYCKTKDVEESLNLYSEML-SKGI-RPTVVTYNTLFHGLFEIHQVE 107
           C H ++    +LI      K  + +  +++ +L +KG  R  +  ++ L     E   + 
Sbjct: 24  CTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRSDIYVFSGLITAYLESGFLR 83

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            A++ F   + +       T    ++ L K  Y       ++ +   +    +  ++ L+
Sbjct: 84  DAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEILECRYPASLYFFNILM 143

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVV------------------------------- 196
           D  CK G++  A  +F  + + GL P+VV                               
Sbjct: 144 DRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQ 203

Query: 197 ----TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
               TY+++I+G C + +MD+AH LF +M  +G+ PN VTF TL+ G  +N +    +E+
Sbjct: 204 PDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEI 263

Query: 253 LHRM 256
             +M
Sbjct: 264 YKQM 267


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 133/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ + + P+   Y+TLI GFC+ G+++ A  LF  M +   + NV ++N LI+G CK  D
Sbjct: 127 MVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGD 186

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+   ++ + M+ + ++P VVT ++L  G F + +   A  +F+ M  + V  +  +YN 
Sbjct: 187 VKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNI 246

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+GL K   + EA  LF+ ++          YS LIDGL K+G++   W+L   +   G
Sbjct: 247 MINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATG 306

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
              NV+TY+ +++  C  G  D A  +F  ++ KG  PN VT+N L+ G  +N       
Sbjct: 307 RSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQ 366

Query: 251 ELLHRM 256
           E+ H +
Sbjct: 367 EIFHDL 372



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 137/242 (56%), Gaps = 9/242 (3%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
              +L +MI++ V+P+    S+LIDG+ L  + ++AR +F +M  NG   ++ +YN +IN
Sbjct: 190 GKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMIN 249

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G  K K V+E++ L+ EM  K + P  +TY+TL  GL ++ ++ +   L DEM+ +  +A
Sbjct: 250 GLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSA 309

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY++ ++ LCK+G+   A  +F  ++    E  +  Y+ L+DGLCK G+L+ A E+F
Sbjct: 310 NVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIF 369

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             L   G   +V  Y +MI+G C +   D         EA G  PN VT+  ++    +N
Sbjct: 370 HDLLIKGYRLDVRLYTVMINGLCREALFD---------EAYGCTPNAVTYEIIIRALFKN 420

Query: 244 NE 245
           ++
Sbjct: 421 DK 422



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 21/277 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L  +++ G +P+    +TL+ G C+  E+ +A      +   G   + V+Y T
Sbjct: 26  LNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGT 85

Query: 61  LINGYCKT---------------------KDVEESLNLYSEMLSKGIRPTVVTYNTLFHG 99
           LING CK+                     K V ++ +LY EM+ K I P VVTYNTL +G
Sbjct: 86  LINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYG 145

Query: 100 LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
              + Q+E A++LF+EM+  ++     ++N  IDGLCK G +     +   +     +  
Sbjct: 146 FCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPD 205

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           +   S LIDG   + K   A  +F ++ + G+  ++ +YNIMI+G      +D+A  LF 
Sbjct: 206 VVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFK 265

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +M+ K + P+ +T++TL+ G  +    S V +L+  M
Sbjct: 266 EMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEM 302



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 14/245 (5%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           RG++ +    S LI+ F    +++ A  +   +   G   + VT  TL+ G C   +V++
Sbjct: 4   RGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKK 63

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+ + ++++KG R   V+Y TL +GL +  + +              A +   Y+  I+
Sbjct: 64  ALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETK--------------APDQFMYSMIIN 109

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LCK+  +V+A +L+  + V +    +  Y+ LI G C +G+LE A  LF  +    ++P
Sbjct: 110 RLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVP 169

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV ++NI+I G C +G +     +   M  + V P+ VT ++L+ G     + +K   + 
Sbjct: 170 NVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIF 229

Query: 254 HRMDE 258
           + M +
Sbjct: 230 NAMAQ 234



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 14/194 (7%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           M++ G   +++  + LIN +     +  + ++ +++L  G +P  VT  TL  GL   ++
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           V+ AL   D++       +  +Y T I+GLCK+G   +A + F              YS 
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGE-TKAPDQF-------------MYSM 106

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +I+ LCK   +  A++L+  +    + P+VVTYN +I+GFC  GQ++ A  LF +M  K 
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 226 VAPNCVTFNTLMLG 239
           + PN  +FN L+ G
Sbjct: 167 IVPNVCSFNILIDG 180



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 45/209 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M  + + P+   YSTLIDG    G I    +L   M   G   NV+TY++
Sbjct: 257 VDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSS 316

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK+   + ++ +++++  KG  P +VTYN L                        
Sbjct: 317 LLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNIL------------------------ 352

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                      +DGLCKNG + +A E+F  L +    L +  Y+ +I+GLC+    + A+
Sbjct: 353 -----------VDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY 401

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHG-FCND 208
                    G  PN VTY I+I   F ND
Sbjct: 402 ---------GCTPNAVTYEIIIRALFKND 421



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 14/177 (7%)

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           +GI+  ++  + L +  + + Q+ +A  +  ++       +T T  T + GLC N  + +
Sbjct: 4   RGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKK 63

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A      +      L   +Y  LI+GLCK G+ +               P+   Y+++I+
Sbjct: 64  ALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKA--------------PDQFMYSMIIN 109

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             C D  +  A+DL+ +M  K + P+ VT+NTL+ G     +    + L + M  +N
Sbjct: 110 RLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  +++ M   G  PN   Y+TL+DGFC   +++ A  +   M   G   N++ YN 
Sbjct: 396 MGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNV 455

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK   V ++L++  EM  KG +P + T+NTL  GL ++ + E AL L+ +M    
Sbjct: 456 LLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDG 515

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A T TYNT I    + G I EA +L   +    C L    Y+ LI   CK+G  E A 
Sbjct: 516 VIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKAL 575

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  + R  L+P+ ++ N++I+G C  G++  A +L  DM  +G+AP+ VT+N+L+ G 
Sbjct: 576 GLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGL 635

Query: 241 IRNNETSKVVELLHRM 256
            +     +   L +++
Sbjct: 636 CKMGNIREAFNLFNKL 651



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 134/260 (51%), Gaps = 1/260 (0%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA+  L D MI+ G RP+ F ++TLI G C  G +  A ++   M  NGC  N++TY 
Sbjct: 360 LDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYT 419

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL++G+CK   +EE+  + +EM +KG    ++ YN L   L +  +V  AL +  EM   
Sbjct: 420 TLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDK 479

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+NT I GLCK     +A  L+R + +         Y+ LI    + G ++ A
Sbjct: 480 GCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEA 539

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L   +   G   + +TYN +I  FC  G  +KA  LF +M  K + P+ ++ N L+ G
Sbjct: 540 LKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLING 599

Query: 240 CIRNNETSKVVELLHRMDER 259
             R  +    +ELL  M  R
Sbjct: 600 LCRVGKVCNALELLRDMIHR 619



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 5/250 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +GV P  + +  ++   C+  E+D A  L   M  +GC+ N V Y TLI+   K   
Sbjct: 199 MLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDR 258

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L L  EM   G  P V T+N + +GL  ++++    KL D M          TY  
Sbjct: 259 VNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGV 318

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE-LFQSLPRV 189
            ++GLC+ G + EA  L   +           ++ LI+G  K G+L+ A   L+  + + 
Sbjct: 319 LMNGLCRVGKVDEAQVLLNKVPTPN----DVHFTILINGYVKSGRLDEANAFLYDKMIKN 374

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+V T+N +IHG C  G M  A D+  DM A G  PN +T+ TL+ G  + N+  + 
Sbjct: 375 GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEA 434

Query: 250 VELLHRMDER 259
             +L+ M  +
Sbjct: 435 GYVLNEMSAK 444



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 32/290 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL-------------------- 42
           E ++L+D M+ RG  PN   Y  L++G C  G++D A+ L                    
Sbjct: 296 EGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYV 355

Query: 43  ------------FVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                       +  M  NGC  +V T+NTLI+G CK   +  ++++ ++M + G  P +
Sbjct: 356 KSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNL 415

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +TY TL  G  + +Q+E A  + +EM           YN  +  LCKNG + +A ++   
Sbjct: 416 ITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGE 475

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C+  I  ++ LI GLCK+ + E A  L++ +   G++ N VTYN +IH F   G 
Sbjct: 476 MSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGA 535

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + +A  L  DM  +G   + +T+N L+    +   T K + L   M  ++
Sbjct: 536 IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 32/288 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M + G  PN+ VY TLI        ++ A +L   M + GC+ +V T+N 
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA----------- 109
           +I G C+   + E   L   ML +G  P  +TY  L +GL  + +V+ A           
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPN 343

Query: 110 ---------------------LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                                  L+D+M  +    +  T+NT I GLCK G +  A ++ 
Sbjct: 344 DVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMV 403

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +    C   +  Y+ L+DG CK  +LE A  +   +   G   N++ YN+++   C +
Sbjct: 404 NDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKN 463

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G++ KA D+  +M  KG  P+  TFNTL+ G  + +     + L   M
Sbjct: 464 GKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 130/258 (50%), Gaps = 8/258 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L   M+  GV  N   Y+TLI  F   G I  A +L   M   GC  + +TYN L
Sbjct: 502 EDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGL 561

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I  +CK    E++L L+ EM+ K + P+ ++ N L +GL  + +V +AL+L  +M H  +
Sbjct: 562 IKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGL 621

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A +  TYN+ I+GLCK G I EA  LF  L+    +     Y+ LI   C+ G  + A+ 
Sbjct: 622 APDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYL 681

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L         +PN VT+ I++  F    ++ K + +     AK +   C+    + LG +
Sbjct: 682 LLLRGVENAFIPNDVTWYILVSNFIK--EIGKENGISFG-TAKVIPSICIQVQNIFLGAV 738

Query: 242 RNN-----ETSKVVELLH 254
            +N      ++  +++LH
Sbjct: 739 LHNMELSYPSTPYLKILH 756



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 79/144 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +L++ M+ RG   +   Y+ LI  FC  G  ++A  LF  M     + + ++ N 
Sbjct: 536 IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNL 595

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+   V  +L L  +M+ +G+ P VVTYN+L +GL ++  +  A  LF+++Q   
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655

Query: 121 VAAETSTYNTFIDGLCKNGYIVEA 144
           +  +  TYNT I   C+ G   +A
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDA 679



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 5/251 (1%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q+G      VY  LID      E     +L + +   G       +  ++  Y +     
Sbjct: 95  QKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPG 154

Query: 73  ESLNLYSEMLSKGI---RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           ++  +  +M  KG+    PT  +YN +   L   +    A  +F EM    V     T+ 
Sbjct: 155 QATRMLLDM--KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFG 212

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             +  LC    +  A  L R +    C      Y  LI  L K  ++  A +L + +  +
Sbjct: 213 VVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLM 272

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G +P+V T+N +I+G C   ++ +   L   M  +G  PN +T+  LM G  R  +  + 
Sbjct: 273 GCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA 332

Query: 250 VELLHRMDERN 260
             LL+++   N
Sbjct: 333 QVLLNKVPTPN 343


>gi|255660964|gb|ACU25651.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 376

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ +L + + M+  G +P +  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I GLCK     EA  L + L     + G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLISGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM  +  APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRRKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  N+  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL  GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRRKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/82 (24%), Positives = 42/82 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +R   PN   ++TL++GF   G+I  A  ++  +  NG   ++++YN  + G C    
Sbjct: 295 MNRRKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNR 354

Query: 71  VEESLNLYSEMLSKGIRPTVVT 92
           + +++    + ++K    T +T
Sbjct: 355 ISDAILFLHDAVTKKTVLTKIT 376


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 138/269 (51%), Gaps = 16/269 (5%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L   M + GV P+ + Y+ LID FC  G I++AR  F  M   GC  NVVTY  L++ Y 
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM------QHSD 120
           K+K + ++ +++  M+     P  VTY+ L  GL +  +++ A ++++++        SD
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593

Query: 121 ----------VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
                     +A    TY   IDGLCK   + +A EL   +    CE     Y  LIDG 
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGF 653

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CKIGK++ A E+F  + + G +P+V TY  +I     DG++D A  +  +M      PN 
Sbjct: 654 CKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNV 713

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDER 259
           VT+  ++ G  +  E  K + LL  M+E+
Sbjct: 714 VTYTAMIDGLSKVGEIEKALNLLSLMEEK 742



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 123/254 (48%), Gaps = 16/254 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---------------- 46
           +A  +   M+     PNA  YS LIDG C  GEI +A E++  +                
Sbjct: 540 QAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGN 599

Query: 47  DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           D      NVVTY  LI+G CK + V ++  L   ML+ G  P  + Y+ L  G  +I ++
Sbjct: 600 DTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKI 659

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           ++A ++F  M          TY + ID + K+G +  A ++   +    C   +  Y+ +
Sbjct: 660 DNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAM 719

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           IDGL K+G++E A  L   +   G  PNVVTY  +I G    G+ D +  LF  M +KG 
Sbjct: 720 IDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGC 779

Query: 227 APNCVTFNTLMLGC 240
           APN VT+  L+  C
Sbjct: 780 APNYVTYRVLINHC 793



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 133/271 (49%), Gaps = 16/271 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A ++L  M+++G  P+   Y+ +I   C   +++++  LF  M   G   +V TY  L
Sbjct: 434 EKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   +E++ + + EM S G  P VVTY  L H   +  Q+  A  +F  M  +  
Sbjct: 494 IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAAC 553

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK--------------CELG--IEAYSC 165
                TY+  IDGLCK G I +A E++  L                  C +   +  Y  
Sbjct: 554 YPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGA 613

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LIDGLCK  K+  A EL  ++   G  PN + Y+ +I GFC  G++D A ++FL M   G
Sbjct: 614 LIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCG 673

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             P+  T+ +L+    ++      +++L  M
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM 704



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 139/325 (42%), Gaps = 71/325 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING---------- 50
           + +A  LLD M+  G  PN  VY  LIDGFC  G+ID A+E+F+ M   G          
Sbjct: 624 VSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTS 683

Query: 51  -------------------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                    C  NVVTY  +I+G  K  ++E++LNL S M  KG
Sbjct: 684 LIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKG 743

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P VVTY  L  GL +  + + +LKLF +M     A    TY   I+  C  G + EA 
Sbjct: 744 CSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAH 803

Query: 146 ELFRTLRVLKCELGIEAYSC---------------------------------LIDGLCK 172
            L   ++       ++ Y C                                 LID   K
Sbjct: 804 LLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSK 863

Query: 173 IGKLETAWELFQSLPRVGLMPNVVT---YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            G+LETA EL + L  V    N+ +   Y  +I   C   Q+++A  L+ +M  KG+ P+
Sbjct: 864 AGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPD 923

Query: 230 CVTFNTLMLGCIRNNETSKVVELLH 254
            + F +L+ G I  N+  + ++L +
Sbjct: 924 LIVFVSLVKGLIEVNKWDEALQLCY 948



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 109/207 (52%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           + PN   Y  LIDG C   ++  A EL  +M   GC  N + Y+ LI+G+CK   ++ + 
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQ 663

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            ++  M   G  P+V TY +L   +F+  +++ A+K+  EM +        TY   IDGL
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL 723

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            K G I +A  L   +    C   +  Y+ LIDGL K GK + + +LF+ +   G  PN 
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDME 222
           VTY ++I+  C  G +D+AH L  +M+
Sbjct: 784 VTYRVLINHCCAAGLLDEAHLLLDEMK 810



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 121/296 (40%), Gaps = 41/296 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA   L  M      PN   Y TL+ GF    +    + +   M   GC  N   +N+L
Sbjct: 288 NEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSL 347

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT------------------LFHGLFE- 102
           ++GYC   D   +  L++ M + G  P  V YN                   L   ++E 
Sbjct: 348 VHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEE 407

Query: 103 ----------------------IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
                                 + + E A ++  EM       +TSTY   I  LC+   
Sbjct: 408 MLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKK 467

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           + ++  LF+ ++       +  Y+ LID  CK G +E A   F  +  VG  PNVVTY  
Sbjct: 468 VEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTA 527

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           ++H +    Q+ +AHD+F  M      PN VT++ L+ G  +  E  K  E+  ++
Sbjct: 528 LLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 128/308 (41%), Gaps = 57/308 (18%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R++++M+  G  PN  ++++L+ G+C  G+   A +LF  M   G     V YN  I   
Sbjct: 327 RIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSI 386

Query: 66  CKTKDV-----------------------------------------EESLNLYSEMLSK 84
           C  +++                                         E++  +  EM+ K
Sbjct: 387 CGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRK 446

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P   TY  +   L +  +VE +  LF EM+ + V  +  TY   ID  CK G I +A
Sbjct: 447 GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQA 506

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
              F  +R + C   +  Y+ L+    K  +L  A ++F  +      PN VTY+ +I G
Sbjct: 507 RSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDG 566

Query: 205 FCNDGQMDKAHDLF-----------LDMEAKG-----VAPNCVTFNTLMLGCIRNNETSK 248
            C  G++ KA +++            D   +G     +APN VT+  L+ G  +  + S 
Sbjct: 567 LCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSD 626

Query: 249 VVELLHRM 256
             ELL  M
Sbjct: 627 AHELLDAM 634



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 41/274 (14%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + +I G       + A      M  N C+ NVVTY TL++G+ K K       + + M++
Sbjct: 275 TQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMT 334

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           +G  P    +N+L HG        +A KLF+ M           YN FI  +C    +  
Sbjct: 335 EGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPN 394

Query: 144 AAEL-------------------FRTLRVLKCELGI----------------------EA 162
           A  L                     T    +C  G+                        
Sbjct: 395 AELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTST 454

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y+ +I  LC+  K+E ++ LFQ + R G+ P+V TY I+I  FC  G +++A   F +M 
Sbjct: 455 YTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 514

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + G +PN VT+  L+   +++ +  +  ++ HRM
Sbjct: 515 SVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM 548



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 7/200 (3%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+   C+    +E+L     +   G RP+ VTYN L   L    QVE   ++  EM  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKL 176
           S    + ST   F   LCK G   +A  +       K +  ++   C  +I GL +    
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLE-----KEDFNLDTVLCTQMISGLMEASLF 287

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A      +     +PNVVTY  ++ GF    Q      +   M  +G  PN   FN+L
Sbjct: 288 NEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSL 347

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G     + +   +L +RM
Sbjct: 348 VHGYCNAGDYAYAYKLFNRM 367


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 142/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  L+ +M++ GV P+ F Y+ L+DG+ L  E  +A+ +F  M   G   +V +Y+ 
Sbjct: 275 MREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSV 334

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K K ++E+++L+  M ++ + P VV Y++L  GL +  ++  ALK  DEM    
Sbjct: 335 MISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRG 394

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY + ID LCK+  + +A  L + ++    +  +  Y+ L+DGLCK G+L  A 
Sbjct: 395 QPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQ 454

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++FQ L   G   +VVTY+IMI+G C +   D+A  L   ME KG  P+ + + T++   
Sbjct: 455 KVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF 514

Query: 241 IRNNETSKVVELLHRM 256
              +   K  +LL  M
Sbjct: 515 FEKDMNDKAEKLLREM 530



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++ V PN   Y++LI GFC+ G++D+A  L   M +     NV T+NTL++G CK   
Sbjct: 215 MFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGK 274

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E+ +L + M+ +G+ P V TYN L  G F + +   A  +F+ M    V  +  +Y+ 
Sbjct: 275 MREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSV 334

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I GL K   + EA +LF  +R       + AYS LIDGLCK G++ +A +    +   G
Sbjct: 335 MISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRG 394

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             PNV+TY  +I   C   Q+DKA  L   ++ +G+  N  T+N L+ G  ++   +   
Sbjct: 395 QPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQ 454

Query: 251 ELLHRM 256
           ++   +
Sbjct: 455 KVFQDL 460



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 145/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LL+ M+ + V PN   ++TL+DG C  G++  A+ L   M   G   +V TYN 
Sbjct: 240 LDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNA 299

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY   K+  ++ N+++ M   G+   V +Y+ +  GL ++  ++ A+ LF+ M++ +
Sbjct: 300 LMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN 359

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   Y++ IDGLCK+G I  A +    +        +  Y+ LID LCK  +++ A 
Sbjct: 360 VIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAI 419

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G+  N+ TYNI++ G C DG++  A  +F D+  KG   + VT++ ++ G 
Sbjct: 420 ALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGL 479

Query: 241 IRNNETSKVVELLHRMDER 259
            + +   + + LL +M+++
Sbjct: 480 CKESLFDEALTLLSKMEDK 498



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 133/252 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L   M   G++ N    + LI+ +C   +I+ A  +F  +   G   +++TY TLI G C
Sbjct: 71  LFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLC 130

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               V+ESLN +  ++S+GI+   V+Y TL +GL +I Q   AL+L  +++      +  
Sbjct: 131 LNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVV 190

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YNT IDGLCK+  + +A +L+  +   +    +  Y+ LI G C +G+L+ A+ L   +
Sbjct: 191 MYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEM 250

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
               + PNV T+N ++ G C +G+M +A  L   M  +GV P+  T+N LM G     E 
Sbjct: 251 VLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEA 310

Query: 247 SKVVELLHRMDE 258
            K   + + M +
Sbjct: 311 GKAKNVFNIMAQ 322



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    + M++    P    +  ++     T        LF  M+++G   N +T N 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC  + +  + ++++++L  G +P ++TY TL  GL    QV+ +L   D +    
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y T I+GLCK G    A  L R +    C   +  Y+ +IDGLCK   +  A+
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +    + PNVVTY  +I+GFC  GQ+DKA  L  +M  K V PN  TFNTL+ G 
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 241 IRNNETSKVVELLHRM 256
            +  +  +   L+  M
Sbjct: 270 CKEGKMREAKSLVAVM 285



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 133/256 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RLL  +     RP+  +Y+T+IDG C    +  A +L+  M       NVVTY +LI 
Sbjct: 173 ALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIY 232

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    ++++  L +EM+ K + P V T+NTL  GL +  ++  A  L   M    V  
Sbjct: 233 GFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGP 292

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  +DG        +A  +F  +  +     + +YS +I GL K+  L+ A +LF
Sbjct: 293 DVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLF 352

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    ++P+VV Y+ +I G C  G+++ A     +M  +G  PN +T+ +L+    ++
Sbjct: 353 EGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKS 412

Query: 244 NETSKVVELLHRMDER 259
           ++  K + LL ++ ++
Sbjct: 413 HQVDKAIALLKKIKDQ 428



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 125/260 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +   +++ G +P+   Y+TLI G CL G++  +      +   G   + V+Y T
Sbjct: 100 INSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGT 159

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK      +L L  ++  +  RP VV YNT+  GL +   V  A  L+ EM    
Sbjct: 160 LINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKR 219

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY + I G C  G + +A  L   + +      +  ++ L+DGLCK GK+  A 
Sbjct: 220 VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAK 279

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G+ P+V TYN ++ G+    +  KA ++F  M   GV  +  +++ ++ G 
Sbjct: 280 SLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGL 339

Query: 241 IRNNETSKVVELLHRMDERN 260
            +     + ++L   M   N
Sbjct: 340 SKMKMLDEAMDLFEGMRNEN 359



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 98/206 (47%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           ++ +  ++    KTK     ++L+  M   GI+   +T N L +    + Q+  A  +F 
Sbjct: 49  IIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFA 108

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++       +  TY T I GLC NG + E+      L     +L   +Y  LI+GLCKIG
Sbjct: 109 KILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIG 168

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +   A  L + +      P+VV YN +I G C D  +  A DL+ +M  K V PN VT+ 
Sbjct: 169 QTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYT 228

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
           +L+ G     +  K   LL+ M  +N
Sbjct: 229 SLIYGFCIVGQLDKAFGLLNEMVLKN 254



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 3/210 (1%)

Query: 53  HNVVTYNTLI---NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           H+++  +TL+     +    ++ ++++ ++ ML     P ++ +  +   L +       
Sbjct: 9   HSIIPNSTLLLSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIV 68

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + LF  M+   + +   T N  I+  C    I  A  +F  +  L  +  I  Y+ LI G
Sbjct: 69  IHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRG 128

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LC  G+++ +      L   G+  + V+Y  +I+G C  GQ   A  L   +E +   P+
Sbjct: 129 LCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPD 188

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            V +NT++ G  ++       +L   M E+
Sbjct: 189 VVMYNTIIDGLCKDKLVRDAFDLYCEMFEK 218



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/82 (24%), Positives = 41/82 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++   ++ +G   +   YS +I+G C     D A  L   M+  GC+ + + Y T
Sbjct: 450 LTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYET 509

Query: 61  LINGYCKTKDVEESLNLYSEML 82
           +IN + +    +++  L  EM+
Sbjct: 510 IINAFFEKDMNDKAEKLLREMI 531


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 126/225 (56%), Gaps = 3/225 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M+ +G+ PN F YS+LI G C+ G    A  LF +M     M + +T+NT
Sbjct: 131 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 190

Query: 61  LINGYCK---TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           L++  CK    + +++++ L+ EM  +G+ P  VTYNTL HGL  + ++  A+ LF EM 
Sbjct: 191 LVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 250

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                 +  TY    D LCKN  + EA  L + +     +  I  YS ++DG+C+ G+LE
Sbjct: 251 VYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELE 310

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
            A +LF  L   GL P+V TY IMI+G C  G + +A  LF +M+
Sbjct: 311 AARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 355



 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 149/295 (50%), Gaps = 38/295 (12%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  +++ G +P+   ++TLI G C+ G+I  A +LF  M   G   +V+TY TLIN
Sbjct: 64  AFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLIN 123

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK + + E+L+L+S+ML+KGI P   TY++L HGL  +   + A++LF  M H  +  
Sbjct: 124 GLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMP 183

Query: 124 ETSTYNTFIDGLCKNGYIV---EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  T+NT +D LCK G I    +A  LF  +           Y+ LI GLC +G+L  A 
Sbjct: 184 DQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 243

Query: 181 ELFQSLPRVGLMPNVVTYNIM----------------------------IH-------GF 205
            LF  +   G +P++VTY I+                            IH       G 
Sbjct: 244 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 303

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C  G+++ A DLF  + +KG+ P+  T+  ++ G  +    ++  +L   MDE +
Sbjct: 304 CRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEND 358



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 120/249 (48%), Gaps = 3/249 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++    P+   +S L+              L+  MD  G  HN  T N LIN +C    
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  + ++  ++L  G +P+  T+ TL  GL    ++  AL+LFD+M       +  TY T
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+GLCK+  + EA  LF  +           YS LI GLC +G  + A  LF ++    
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 191 LMPNVVTYNIMIHGFCNDGQ---MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           +MP+ +T+N ++   C +G    MDKA  LF +M  +G+ P+ VT+NTL+ G        
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 248 KVVELLHRM 256
             + L H M
Sbjct: 241 DAIALFHEM 249



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 39/166 (23%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  L + M Q+G+ P+   Y+TLI G C  G +  A  LF  M + G + ++VTY  
Sbjct: 204 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 263

Query: 61  L-----------------------------------INGYCKTKDVEESLNLYSEMLSKG 85
           L                                   ++G C+  ++E + +L+S++ SKG
Sbjct: 264 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 323

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           + P V TY  + +GL +   +  A KLF EM  +D+     +Y+TF
Sbjct: 324 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI----ESYSTF 365



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 51/101 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL ++    + P+  +YS ++DG C  GE++ AR+LF  +   G   +V TY  
Sbjct: 274 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 333

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
           +ING C+   + E+  L+ EM    I          F G+F
Sbjct: 334 MINGLCQQGLLAEASKLFGEMDENDIESYSTFSRNAFKGIF 374


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +++ M   G  P+   Y+T+IDG+C  G++ +A  L   M       N +T+N LI
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C+ ++V  +  ++ EM  +G++P VVTYN+L +GL    +++ AL L D+M    + 
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK 366

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I+G CK   + EA E+   +        +  ++ LID   K G+++ A+ L
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ PNV TYN +I GFC +G + +A  L  +ME  G+  + VT+N L+    +
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCK 486

Query: 243 NNETSKVVELLHRM 256
             ET K V LL  M
Sbjct: 487 KGETRKAVRLLDEM 500



 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 3/236 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ + M ++G++PN   Y++LI+G C  G++D A  L   M   G   NVVTYN LIN
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK K ++E+  +  ++  +G+ P V+T+NTL     +  +++ A  L   M  + V  
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             STYN  I G C+ G + EA +L + +     +  +  Y+ L+D LCK G+   A  L 
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 184 QSLP---RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             +    + G   N+VTYN++I GFCN G++++A+ L  +M  KG+ PN  T++ L
Sbjct: 498 DEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 131/247 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+R +  N   +  +I+G C  G+  +A ++   M   G   +V+TYNT+I+GYCK   
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + ++  L  EM++K I P  +T+N L  G      V  A K+F+EMQ   +     TYN+
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+GLC NG + EA  L   +  +  +  +  Y+ LI+G CK   L+ A E+   + + G
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L PNV+T+N +I  +   G+MD A  L   M   GV PN  T+N L++G  R     +  
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEAR 459

Query: 251 ELLHRMD 257
           +L   M+
Sbjct: 460 KLAKEME 466



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 141/266 (53%), Gaps = 11/266 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  LL  M+ + + PN   ++ LIDGFC    +  A+++F  M   G   NVVTYN+
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    ++E+L L  +M   G++P VVTYN L +G  +   ++ A ++ D++    
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG----IEAYSCLIDGLCKIGKL 176
           +A    T+NT ID   K G + +A      LR +  + G    +  Y+CLI G C+ G +
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAF----LLRSMMLDTGVCPNVSTYNCLIVGFCREGNV 455

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD---MEAKGVAPNCVTF 233
           + A +L + +   GL  ++VTYNI++   C  G+  KA  L  +   ME KG   N VT+
Sbjct: 456 KEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTY 515

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           N L+ G     +  +   LL+ M E+
Sbjct: 516 NVLIKGFCNKGKLEEANRLLNEMLEK 541



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 126/241 (52%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N+ +   L+  +   GE+D A E F      G   + ++ N ++    K   +    ++Y
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM+ + I   VVT++ + +GL ++ + + A  + ++M+    +    TYNT IDG CK 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + +A  L + +   +       ++ LIDG C+   +  A ++F+ + R GL PNVVTY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I+G C++G++D+A  L   M   G+ PN VT+N L+ G  +     +  E+L  + +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 259 R 259
           R
Sbjct: 398 R 398



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 3/146 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  L  +M+  GV PN   Y+ LI GFC  G +  AR+L   M+ NG   ++VTYN 
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479

Query: 61  LINGYCKTKDVEESLNLYSEML---SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           L++  CK  +  +++ L  EM     KG R  +VTYN L  G     ++E A +L +EM 
Sbjct: 480 LVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 539

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVE 143
              +    +TY+   D + + G+I +
Sbjct: 540 EKGLIPNRTTYDILRDEMMEKGFIPD 565


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 142/258 (55%), Gaps = 5/258 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DE+  +   M +     + + YSTLI G C +G +D A  ++  M  NG   +VV YNT+
Sbjct: 272 DESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 331

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NGY +   +EE L L+  M  +G R TVV+YN L  GLFE  +V+ A+ +++ +   D 
Sbjct: 332 LNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDC 390

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A++ TY   + GLCKNGY+ +A  +       + +L   AYS +I+GLC+ G+L+    
Sbjct: 391 CADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAG 450

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   + + G  PN    N +I+GF    +++ A   F +M +KG  P  VT+NTL+ G  
Sbjct: 451 VLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 510

Query: 242 RNNETSK----VVELLHR 255
           +    S+    V E+LH+
Sbjct: 511 KAERFSEAYALVKEMLHK 528



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 133/245 (54%), Gaps = 1/245 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G +P    Y++L++    + + D A   F+  +  G   N+ TYN LI   C+ K  +++
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M  +G  P V +Y TL + L +   +  ALKLFDEM    V  + + YN  IDG
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228

Query: 135 LCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
             K G I+ A+E++ R L+       I +Y+ +I+GLCK GK + ++E++  + +     
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++ TY+ +IHG C  G +D A  ++ +M   GV+P+ V +NT++ G +R     + +EL 
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348

Query: 254 HRMDE 258
             M++
Sbjct: 349 KVMEK 353



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 133/243 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE + +LD M + G +PN  V + +I+GF    +++ A   F +M   GC   VVTYNT
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K +   E+  L  EML KG +P ++TY+ L +GL +  +++ AL L+ +     
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC +G + +A +L+  ++  KC   +  ++ L++G  K+   E A 
Sbjct: 565 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERAS 624

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +++  + + G  P++++YNI + G C+  ++  A     D   +GV P  +T+N L+   
Sbjct: 625 KIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAV 684

Query: 241 IRN 243
           + N
Sbjct: 685 LDN 687



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 134/260 (51%), Gaps = 2/260 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA          G+ PN   Y+ LI   C   + D+A+EL   M   G   +V +Y TL
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSD 120
           IN   K   + ++L L+ EM  +G+ P V  YN L  G F+   + +A ++++ + +   
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     +YN  I+GLCK G   E+ E++  ++  +    +  YS LI GLC  G L+ A 
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +++ +   G+ P+VV YN M++G+   G++++  +L+  ME +G     V++N L+ G 
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGL 369

Query: 241 IRNNETSKVVELLHRMDERN 260
             N +  + + +   + E++
Sbjct: 370 FENAKVDEAISIWELLPEKD 389



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 123/241 (51%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + F YS++I+G C  G +D    +   M  +GC  N    N +ING+ +   +E++L  +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M+SKG  PTVVTYNTL +GL +  +   A  L  EM H        TY+  ++GLC+ 
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             +  A  L+        +  ++ ++ +I GLC  GK+E A +L+  + +   +PN+VT+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N ++ GF      ++A  ++  +   G  P+ +++N  + G    +  S  V  L+   +
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 667

Query: 259 R 259
           R
Sbjct: 668 R 668



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 134/257 (52%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  LL+ M ++G  P+ F Y TLI+     G +  A +LF  M   G   +V  YN L
Sbjct: 166 DKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 225

Query: 62  INGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           I+G+ K  D+  +  ++  +L    + P + +YN + +GL +  + + + +++  M+ ++
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY+T I GLC +G +  A  +++ +        +  Y+ +++G  + G++E   
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL++ + + G    VV+YNI+I G   + ++D+A  ++  +  K    + +T+  L+ G 
Sbjct: 346 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 241 IRNNETSKVVELLHRMD 257
            +N   +K + +L   +
Sbjct: 405 CKNGYLNKALSILEEAE 421



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 75/139 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L    +++G +P+  +++ +I G C +G+++ A +L+  M    C+ N+VT+NT
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+ K +D E +  ++  +L  G +P +++YN    GL   H++  A+   ++     
Sbjct: 610 LMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 669

Query: 121 VAAETSTYNTFIDGLCKNG 139
           V     T+N  +  +  NG
Sbjct: 670 VLPTAITWNILVRAVLDNG 688



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 2/193 (1%)

Query: 69  KDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           K+   +L+++  +    G   T   ++ +   LF+   V H  ++ + ++          
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDV 80

Query: 128 YNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
             T I    KN    +A ++F+ +  +  C+ GI +Y+ L++ L +  K + A   F   
Sbjct: 81  ALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF 140

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL PN+ TYNI+I   C   Q DKA +L   M  +G +P+  ++ TL+    +N   
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 247 SKVVELLHRMDER 259
           S  ++L   M ER
Sbjct: 201 SDALKLFDEMPER 213


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   + + G+ P+   Y+ L+DG+C  G+++ AR     M   GC  +V TY  
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K +++      + EMLSKG++P    YNT       +     A +L + M    
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++++T TYN F+DGLCK+G + +A  L+  +     +     Y+CLI   C+ G+L  A 
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   GL P+ VTY + IH +C  G +  A+  F  M  +GV PN VT+N L+   
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627

Query: 241 IRNNETSKVVELLHRMDER 259
            R   T+   +  H M ER
Sbjct: 628 CRMGRTNLAYQHFHEMLER 646



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 139/261 (53%), Gaps = 3/261 (1%)

Query: 1   MDEASRLLDLMIQR--GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +D+A++LL  M  R  G  P+   Y+ +I+G    GE+++A +L   M ++    +  T+
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTF 305

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI GY     VE++  L  EM ++GI PTVVTYNT+ HG+F    VE A   F EM+ 
Sbjct: 306 NPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA 365

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +  +  TYN+ I+G CK G + EA  LF  L+       +  Y+ L+DG C++G LE 
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEE 425

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A    Q +   G  P+V TY I+++G      +    + F +M +KG+ P+C  +NT + 
Sbjct: 426 ARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRIS 485

Query: 239 GCIRNNETSKVVELLHRMDER 259
             +    TS+  +L   M  R
Sbjct: 486 AELILGSTSEAFQLTEVMISR 506



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 132/249 (53%), Gaps = 5/249 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI--NGCMHNVVTYNTLINGYCKT 68
           M+Q G+ P+   Y+TL+D F   G +D+A +L   M+    GC+ + VTYN +ING  + 
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281

Query: 69  KDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            ++E++  L   M +SK  + +  T+N L  G F    VE A  L  EM++  +     T
Sbjct: 282 GELEKAAQLVDRMRMSK--KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVT 339

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT I G+ ++G +  A   F  +R +     +  Y+ LI+G CK G L+ A  LF  L 
Sbjct: 340 YNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLK 399

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           R GL P+V+TYNI++ G+C  G +++A     +M  +G  P+  T+  LM G  +    +
Sbjct: 400 RAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLA 459

Query: 248 KVVELLHRM 256
            V E    M
Sbjct: 460 MVREFFDEM 468



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 117/233 (50%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
             D M+ +G++P+ F Y+T I    + G    A +L   M   G   + VTYN  ++G C
Sbjct: 464 FFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLC 523

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K+ +++++  L+ +M+S G++P  +TY  L H   E  ++  A  +FD M  S +     
Sbjct: 524 KSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAV 583

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY  FI   C+ G +  A   F+ +           Y+ LI  LC++G+   A++ F  +
Sbjct: 584 TYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEM 643

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              GL PN  TY ++I G C +G  ++A  L+ +M   G+ P+  T N L  G
Sbjct: 644 LERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG 696



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 137/272 (50%), Gaps = 36/272 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A++L+D M +   + +AF ++ LI G+   G +++A  L + M+  G +  VVTYNT
Sbjct: 284 LEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNT 342

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  ++ +VE +   + EM + G+ P ++TYN+L +G  +   ++ AL LF +++ + 
Sbjct: 343 IIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG 402

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TYN  +DG C+ G + EA    + +    C+  +  Y+ L++G  K+  L    
Sbjct: 403 LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVR 462

Query: 181 ELFQSLPRVGLMP-----------------------------------NVVTYNIMIHGF 205
           E F  +   GL P                                   + VTYNI + G 
Sbjct: 463 EFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGL 522

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           C  G +  A+ L++ M + G+ P+C+T+  L+
Sbjct: 523 CKSGNLKDAYVLWMKMVSDGLQPDCITYTCLI 554



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 1/213 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA +L ++MI RG+  +   Y+  +DG C +G +  A  L++ M  +G   + +TY  L
Sbjct: 494 SEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCL 553

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +C+   + E+ +++  ML  G+ P+ VTY    H       +  A   F +M    V
Sbjct: 554 IHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGV 613

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  I  LC+ G    A + F  +           Y+ LIDG CK G  E A  
Sbjct: 614 RPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIR 673

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           L+  + + G+ P+  T+N +  GF ++GQ   A
Sbjct: 674 LYSEMHQHGIHPDHCTHNALFKGF-DEGQSKHA 705



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%)

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS--TYNTFID 133
           ++Y+EML  GI P++VTYNTL    F   +V+ A KL  EM+        S  TYN  I+
Sbjct: 217 SVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVIN 276

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GL + G + +AA+L   +R+ K +     ++ LI G    G +E A  L   +   G++P
Sbjct: 277 GLARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVP 335

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            VVTYN +IHG    G ++ A   F++M A G+ P+ +T+N+L+ G
Sbjct: 336 TVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLING 381



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 1/104 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ GVRPN   Y+ LI   C  G  + A + F  M   G   N  TY  LI+G CK  +
Sbjct: 608 MLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGN 667

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
            EE++ LYSEM   GI P   T+N LF G F+  Q +HA++  +
Sbjct: 668 WEEAIRLYSEMHQHGIHPDHCTHNALFKG-FDEGQSKHAIQYME 710



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 18/77 (23%), Positives = 38/77 (49%)

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   G+ P +   N+++    ++ + D    ++ +M   G+ P+ VT+NTL+    R
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 243 NNETSKVVELLHRMDER 259
                +  +LL  M+ R
Sbjct: 244 EGRVDQAAKLLREMEAR 260


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 140/261 (53%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A   L  M + G  P    YS+++  FC TG + +A ++F  M   GC  ++V +N 
Sbjct: 114 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 173

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  + + + E+  L+  M S+G +P VVTYNT+  GL +  +++ A+ L + M+  D
Sbjct: 174 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 233

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
           V+    TY T ID LCK   + +A E+F  +    C     AYS   LI+GLCK  +   
Sbjct: 234 VSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGE 293

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A E+FQ +   G+ P VVTYN ++ G  +  ++  A +L   M  +  APN  T+  L+ 
Sbjct: 294 AKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILIS 353

Query: 239 GCIRNNETSKVVELLHRMDER 259
              + ++  +  +LL  M ++
Sbjct: 354 SLCKTDQVEEAFKLLSAMRDK 374



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 136/286 (47%), Gaps = 38/286 (13%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LD M++ G+ PNA +Y+ LI   C  G +  A      M    C  NVV+YN +I+GYCK
Sbjct: 52  LDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCK 110

Query: 68  TKDVEESL-----------------------------------NLYSEMLSKGIRPTVVT 92
            +++E++L                                   ++++EM +KG  P +V 
Sbjct: 111 ARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVN 170

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           +N L  GL+   ++  A +LF  M       +  TYNT I GLCK   + EA  L   ++
Sbjct: 171 FNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMK 230

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN--IMIHGFCNDGQ 210
                     Y+ LID LCK  +L+ A+E+F+ +           Y+  I+I+G C   +
Sbjct: 231 QEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARR 290

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +A ++F +M  +G++P  VT+NTL+ G +   +    +EL + M
Sbjct: 291 PGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 336



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 131/260 (50%), Gaps = 5/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL+ M Q  V P    Y+TLID  C    + +A E+F  M    C      Y+ 
Sbjct: 219 LDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSV 278

Query: 61  LI--NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           LI  NG CK +   E+  ++ EM  +GI PTVVTYNTL  GL    +++ A++L   M  
Sbjct: 279 LILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLD 338

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
              A    TY   I  LCK   + EA +L   +R       ++ +  L+  L + G+L+ 
Sbjct: 339 QVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDD 398

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A+EL++ + R+     V + NI++ G    G +D+A D    M   G+ P+  T++ L++
Sbjct: 399 AFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVV 458

Query: 239 GCI---RNNETSKVVELLHR 255
           G     + ++  K+VE L R
Sbjct: 459 GLCWQGKADQARKLVEELVR 478



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +++ M   G  P+   +  LI GF  +G   R       M   G   N + YN LI
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   + E+ + Y + + +   P VV+YN +  G  +   +E AL    EM+     
Sbjct: 72  SCLCKAGMLAEAES-YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHP 130

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                Y++ +   CK G + +A ++F  +    CE  I  ++ L+ GL +  K+  A EL
Sbjct: 131 PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 190

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+S+   G  P+VVTYN MI G C   ++D+A  L   M+ + V+P  VT+ TL+    +
Sbjct: 191 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 250

Query: 243 NNETSKVVELLHRMDE 258
                +  E+  +M E
Sbjct: 251 FARLQQAYEVFEKMAE 266



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 3/226 (1%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           + +A  +   M   G   +V ++  LI G+ K+   +   +    ML  G+ P  + YN 
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69

Query: 96  LFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           L   L +   +  A      M QH   A    +YN  IDG CK   I +A    R +  L
Sbjct: 70  LISCLCKAGMLAEAESYLKRMPQH--CAPNVVSYNIIIDGYCKARNIEKALAFLREMEEL 127

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                  AYS ++   CK G +  A ++F  +P  G  P++V +N+++ G     ++ +A
Sbjct: 128 GHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEA 187

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +LF  M ++G  P+ VT+NT++ G  +  +  + V LL RM + +
Sbjct: 188 RELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 233



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 36/195 (18%)

Query: 100 LFEIHQVEHALKLFDEMQHSDVAAETST-------------------------------- 127
           L E   V  A  + +EM+++  + +  +                                
Sbjct: 4   LVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPN 63

Query: 128 ---YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
              YN  I  LCK G + EA    + +    C   + +Y+ +IDG CK   +E A    +
Sbjct: 64  AILYNNLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALAFLR 122

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +  +G  P    Y+ ++  FC  G + KA D+F +M AKG  P+ V FN L+ G  R  
Sbjct: 123 EMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRAR 182

Query: 245 ETSKVVELLHRMDER 259
           +  +  EL   M+ R
Sbjct: 183 KIHEARELFRSMNSR 197


>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
          Length = 332

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 137/266 (51%), Gaps = 10/266 (3%)

Query: 3   EASRLLDLMIQRGVRPNAF----------VYSTLIDGFCLTGEIDRARELFVSMDINGCM 52
           EA  L+D M++ G +PNA           + + ++D  C  G    A+ LF  M   G  
Sbjct: 28  EALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIF 87

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            NV+TYN +I+ +C +    ++  L   M+ K I P +VT++ L +   +  +V  A ++
Sbjct: 88  PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 147

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           + EM    +   T TYN+ IDG CK   + +A  +  ++    C   +  +S LI+G CK
Sbjct: 148 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 207

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
             +++   E+F  + R G++ N VTY  +IHGFC  G +D A DL  +M + GVAP+ +T
Sbjct: 208 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 267

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDE 258
           F+ ++ G     E  K   +L  + +
Sbjct: 268 FHCMLAGLCSKKELRKAFAILEDLQK 293



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 117/230 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M ++G+ PN   Y+ +ID FC +G    A +L   M       ++VT++ LIN
Sbjct: 74  AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 133

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            + K + V E+  +Y EML   I PT +TYN++  G  +  +V+ A ++ D M     + 
Sbjct: 134 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 193

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T++T I+G CK   +    E+F  +           Y+ LI G C++G L+ A +L 
Sbjct: 194 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 253

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
             +   G+ P+ +T++ M+ G C+  ++ KA  +  D++   V P  + F
Sbjct: 254 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLIFF 303



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPT----------VVTYNTLFHG 99
           GC  NVVT+NTL+N  C+   V E+L L   M+ +G +P           VV    +   
Sbjct: 5   GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDR 64

Query: 100 LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
           L +     +A  LF EM    +     TYN  ID  C +G   +A +L R +   +    
Sbjct: 65  LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 124

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           I  +S LI+   K  K+  A E+++ + R  + P  +TYN MI GFC   ++D A  +  
Sbjct: 125 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 184

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            M +KG +P+ VTF+TL+ G  +       +E+   M  R
Sbjct: 185 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 224



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 107/198 (54%), Gaps = 4/198 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  MI++ + P+   +S LI+ F    ++  A E++  M         +TYN++I
Sbjct: 108 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 167

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK   V+++  +   M SKG  P VVT++TL +G  +  +V++ +++F EM    + 
Sbjct: 168 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 227

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAW 180
           A T TY T I G C+ G +  A +L   +  + C +  +   + C++ GLC   +L  A+
Sbjct: 228 ANTVTYTTLIHGFCQVGDLDAAQDLLNEM--ISCGVAPDYITFHCMLAGLCSKKELRKAF 285

Query: 181 ELFQSLPRVGLMPNVVTY 198
            + + L +  + P ++ +
Sbjct: 286 AILEDLQKSEVCPRLIFF 303



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 84/152 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M++  + P    Y+++IDGFC    +D A+ +  SM   GC  +VVT++T
Sbjct: 141 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 200

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK K V+  + ++ EM  +GI    VTY TL HG  ++  ++ A  L +EM    
Sbjct: 201 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 260

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           VA +  T++  + GLC    + +A  +   L+
Sbjct: 261 VAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 292



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 74/121 (61%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A R+LD M  +G  P+   +STLI+G+C    +D   E+F  M   G + N VTY T
Sbjct: 176 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 235

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+  D++ + +L +EM+S G+ P  +T++ +  GL    ++  A  + +++Q S+
Sbjct: 236 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 295

Query: 121 V 121
           V
Sbjct: 296 V 296


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 4/234 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   +++ A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CKT  ++ ++  Y EML +G  P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLET 178
           +  +  TY T IDG CK G +  A  L+   R++K  + ++  AY+ LI GLC+ G+   
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETA--LYYRKRMIKENIRLDDVAYTALISGLCREGQSVD 364

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           A ++ + +  VGL P+  TY ++I+ FC  G +     L  +M+  G  P  VT
Sbjct: 365 AEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ 
Sbjct: 152 MRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSV 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   + ++  L+ EM+  G+ P  VT+ TL  G  +   ++ A++ + EM    
Sbjct: 212 LINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA 
Sbjct: 272 FSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAL 331

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + + +  +  + V Y  +I G C +GQ   A  +  +M + G+ P+  T+  ++   
Sbjct: 332 YYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEF 391

Query: 241 IRNNETSKVVELLHRM 256
            +  +     +LL  M
Sbjct: 392 CKKGDVKTGSKLLKEM 407



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++ E+   G+RP+VV++NTL +G   +  ++   +L   M 
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSID 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E ++ + R G  P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +    +    RM + N
Sbjct: 319 DGSCKEGDLETALYYRKRMIKEN 341



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS + + +++ +G  R + +V+S LI  +  +G +  A E F     +       T  
Sbjct: 46  DSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++  + K K  +     Y E+L  G   ++  +N L H   +  ++  A  +FDE+   
Sbjct: 106 KVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT ++G  + G + E   L   +     +  +  YS LI+GLCK  K+  A
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ELF  +   GL+PN VT+  +I G C  G +D A + + +M  +G +P+ +T+NTL+ G
Sbjct: 226 NELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  +  +L+  M
Sbjct: 286 LCKKGDLKQAQDLIDEM 302


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 143/257 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ + M+  G++P+  +Y+ L+  FC  G +D+A  +  +++ N  +  + TY ++++
Sbjct: 246 AFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILD 305

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY K  +++++L ++  + + G+RP VV+YN+L  GL +  Q+E+A  + +EM  + V  
Sbjct: 306 GYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVP 365

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y    +G  + G + +A  +F+ ++     + I AY  L+   CK G ++ A E+F
Sbjct: 366 NERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVF 425

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q +   GL  N +TY  M+ G+   G++ KA DL  DM+  G   + + + + +  C R+
Sbjct: 426 QQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRS 485

Query: 244 NETSKVVELLHRMDERN 260
            +T +V E L  M E+ 
Sbjct: 486 GDTEEVTETLAVMREKK 502



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 125/244 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P A  Y  ++  F   G + +A ++   MD +G   N + Y  +++GY +  D   +
Sbjct: 187 GLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAA 246

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             ++ +M+S G++P +V YN L H   +  +++ AL + + ++ + +     TY + +DG
Sbjct: 247 FKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDG 306

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
             K G I +A E+F  ++      G+ +Y+ L+ GL K  ++E A  +   +   G++PN
Sbjct: 307 YVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPN 366

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             +Y  +  G+   G ++KA  +F  M+ + +A + V +  L+  C ++    +  E+  
Sbjct: 367 ERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQ 426

Query: 255 RMDE 258
           ++ +
Sbjct: 427 QITD 430



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A    + M+ +G++ N  V+ ++I G+   G  + A   F        +   + YN+
Sbjct: 68  MEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNS 127

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++  YC+  ++E    L ++M  +G +  +  Y T+ +G  EI   E  L  F  ++   
Sbjct: 128 IVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 187

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++   +TY   +    K G + +A ++   +           Y+ ++DG  + G    A+
Sbjct: 188 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 247

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++++ +   GL P++V YNI++H FC  G+MDKA  +  ++EA  + P   T+ +++ G 
Sbjct: 248 KVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGY 307

Query: 241 IRNNETSKVVELLHRM 256
           ++     K +E+  R+
Sbjct: 308 VKGGNIQKALEVFDRI 323



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 120/260 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+    LL  M + G + N  +Y+T+++GF    + ++    F  +   G      TY  
Sbjct: 138 METVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGC 197

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++  + K  ++ ++L++  EM   G+ P  + Y  +  G         A K++++M  + 
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 257

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  +   CK G + +A  +   +   +    IE Y+ ++DG  K G ++ A 
Sbjct: 258 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKAL 317

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +   GL P VV+YN ++ G     QM+ A  +  +M A GV PN  ++  L  G 
Sbjct: 318 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGY 377

Query: 241 IRNNETSKVVELLHRMDERN 260
            R  +  K   +  RM + N
Sbjct: 378 ARAGDVEKAFGMFQRMKKEN 397



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 118/250 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L+ +    + P    Y++++DG+   G I +A E+F  +   G    VV+YN+
Sbjct: 278 MDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNS 337

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K + +E +  + +EML+ G+ P   +Y  L  G      VE A  +F  M+  +
Sbjct: 338 LLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN 397

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +   Y   +   CK+G +  AAE+F+ +     +     Y  ++DG  + G+L  A 
Sbjct: 398 LAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKAR 457

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   + + G   + + Y   I      G  ++  +    M  K +  N  T+ TL+ G 
Sbjct: 458 DLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 517

Query: 241 IRNNETSKVV 250
           +   +  + +
Sbjct: 518 LAAADPDQAI 527



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 106/240 (44%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P    Y  L+D +   G+   AR  F +M  +    NV  Y +LI+ Y + +D+E ++ 
Sbjct: 14  KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
              EMLS+GI+     + ++  G       E A   F++ +  ++      YN+ +   C
Sbjct: 74  CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 133

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G +     L   +     +  +  Y+ +++G  +I   E     F  L   GL P   
Sbjct: 134 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAA 193

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  ++  F   G M KA D+  +M+  GV+PN + +  +M G  R  + +   ++   M
Sbjct: 194 TYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 253



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 83/201 (41%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  L++ Y +  D   +   +  M +  I+P V  Y +L H   E   +E A+   +EM 
Sbjct: 20  YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 79

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +    + + + I G    G    A   F   +      G   Y+ ++   C+ G +E
Sbjct: 80  SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNME 139

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           T   L   +   G   N+  Y  +++GF      +K    F  ++A G++P   T+  ++
Sbjct: 140 TVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIV 199

Query: 238 LGCIRNNETSKVVELLHRMDE 258
               +    +K +++L  MD+
Sbjct: 200 KLFTKAGNMAKALDILEEMDK 220


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RLLD M++ G++ N F+ ++LI+G+C  GEI  A  +   M       +  +YNT
Sbjct: 314 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC+     E+ NL  +ML +GI PTV+TYNTL  GL  +   + AL+++  M    
Sbjct: 374 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 433

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +   Y+T +DGL K      A+ L++ +           ++ +I GLCK+GK+  A 
Sbjct: 434 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 493

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +  +G  P+ +TY  +I G+C    + +A  +   ME + ++P+   +N+L+ G 
Sbjct: 494 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 553

Query: 241 IRNNETSKVVELLHRMDER 259
            ++    +V +LL  M  R
Sbjct: 554 FKSRRLVEVTDLLTEMGIR 572



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 137/258 (53%), Gaps = 10/258 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+Q G+ P    Y+TL+ G C  G  D A +++  M   G   + V Y+TL+
Sbjct: 386 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 445

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K ++ E +  L+ ++L++G   + +T+NT+  GL ++ ++  A ++FD+M+    +
Sbjct: 446 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 505

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T IDG CK   + +A ++   +        IE Y+ LI GL K  +L    +L
Sbjct: 506 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDL 565

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   GL PN+VTY  +I G+C +G +DKA   + +M   G++ N +  +T++ G  R
Sbjct: 566 LTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 625

Query: 243 NNETSKVVELLHRMDERN 260
                     L R+DE N
Sbjct: 626 ----------LGRIDEAN 633



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 128/250 (51%), Gaps = 1/250 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+ G+ P+ F+ S +++ FC  G++D A      M+  G   N+VTY++LINGY    D
Sbjct: 183 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 242

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH-SDVAAETSTYN 129
           VE +  +   M  KG+   VVTY  L  G  +  +++ A K+   MQ  + +  +   Y 
Sbjct: 243 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 302

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             IDG C+ G I +A  L   +  L  +  +   + LI+G CK G++  A  +   +   
Sbjct: 303 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 362

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            L P+  +YN ++ G+C +G   +A +L   M  +G+ P  +T+NTL+ G  R       
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422

Query: 250 VELLHRMDER 259
           +++ H M +R
Sbjct: 423 LQIWHLMMKR 432



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 1/243 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+  +  M   GV PN   Y +LI+G+   G+++ A+ +   M   G   NVVTY  
Sbjct: 208 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 267

Query: 61  LINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI GYCK   ++E+  +   M  +  + P    Y  L  G     +++ A++L DEM   
Sbjct: 268 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 327

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +       N+ I+G CK G I EA  +   +     +    +Y+ L+DG C+ G    A
Sbjct: 328 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 387

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L   + + G+ P V+TYN ++ G C  G  D A  ++  M  +GVAP+ V ++TL+ G
Sbjct: 388 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 447

Query: 240 CIR 242
             +
Sbjct: 448 LFK 450



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 32/291 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + D M   G  P+   Y TLIDG+C    + +A ++  +M+      ++  YN+
Sbjct: 489 MVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNS 548

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K++ + E  +L +EM  +G+ P +VTY  L  G  +   ++ A   + EM  + 
Sbjct: 549 LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 608

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR----------VLKCELGIEA-------- 162
           ++A     +T + GL + G I EA  L + +            LK ++   A        
Sbjct: 609 LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSL 668

Query: 163 --------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
                         Y+  I GLCK GK++ A   F  L   G +P+  TY  +IHG+   
Sbjct: 669 DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAA 728

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G +D+A  L  +M  +G+ PN VT+N L+ G  ++    +   L H++ ++
Sbjct: 729 GNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 779



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM-HNVVTYN 59
           ++ A  +L  M ++GV  N   Y+ LI G+C   ++D A ++   M     +  +   Y 
Sbjct: 243 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 302

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+GYC+T  +++++ L  EML  G++  +   N+L +G  +  ++  A  +   M   
Sbjct: 303 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 362

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++  ++ +YNT +DG C+ G+  EA  L   +     E  +  Y+ L+ GLC++G  + A
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++  + + G+ P+ V Y+ ++ G       + A  L+ D+ A+G   + +TFNT++ G
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 482

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  +  +  E+  +M +
Sbjct: 483 LCKMGKMVEAEEIFDKMKD 501



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 114/228 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++  LM++RGV P+   YSTL+DG       + A  L+  +   G   + +T+NT+
Sbjct: 420 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 479

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK   + E+  ++ +M   G  P  +TY TL  G  +   V  A K+   M+   +
Sbjct: 480 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 539

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +     YN+ I GL K+  +VE  +L   + +      I  Y  LIDG CK G L+ A+ 
Sbjct: 540 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 599

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            +  +   GL  N++  + M+ G    G++D+A+ L   M   G  P+
Sbjct: 600 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 647



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + D M + G  P+    ++L++     GE   A  ++  M   G + +V   + ++N +C
Sbjct: 144 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 203

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   V+E+     +M + G+ P +VTY++L +G   +  VE A  +   M    V+    
Sbjct: 204 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 263

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIGKLETAWELFQS 185
           TY   I G CK   + EA ++ R ++     +  E AY  LIDG C+ GK++ A  L   
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + R+GL  N+   N +I+G+C  G++ +A  +   M    + P+  ++NTL+ G  R   
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383

Query: 246 TSKVVELLHRM 256
           TS+   L  +M
Sbjct: 384 TSEAFNLCDKM 394



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 75/130 (57%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  VY+  I G C TG++D AR  F  + + G + +  TY TLI+GY    +V+E+  L
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 737

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML +G+ P +VTYN L +GL +   V+ A +LF ++    +     TYNT IDG CK
Sbjct: 738 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 797

Query: 138 NGYIVEAAEL 147
            G +  A +L
Sbjct: 798 IGNMDAAFKL 807



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 94/217 (43%), Gaps = 32/217 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRA---------------RELFVSMDIN------ 49
           M + G+  N  + ST++ G    G ID A                E F+  DI       
Sbjct: 604 MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQK 663

Query: 50  -------GC----MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
                   C    + N + YN  I G CKT  V+++   +S +  KG  P   TY TL H
Sbjct: 664 IADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIH 723

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           G      V+ A +L DEM    +     TYN  I+GLCK+  +  A  LF  L       
Sbjct: 724 GYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 783

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            +  Y+ LIDG CKIG ++ A++L   +   G+ P++
Sbjct: 784 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 72/124 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A R   ++  +G  P+ F Y TLI G+   G +D A  L   M   G + N+VTYN 
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 755

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK+++V+ +  L+ ++  KG+ P VVTYNTL  G  +I  ++ A KL D+M    
Sbjct: 756 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 815

Query: 121 VAAE 124
           ++  
Sbjct: 816 ISPS 819



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 1/201 (0%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            ++ ++  Y +    + +L ++  M   G  P++ + N+L + L +  +   A  ++ +M
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               +  +    +  ++  CK+G + EAA   + +  L  E  I  Y  LI+G   +G +
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNT 235
           E A  + + +   G+  NVVTY ++I G+C   +MD+A  +   M E   + P+   +  
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+ G  R  +    V LL  M
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEM 324



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           V+  ++  +   G    A  +F +M   G + ++ + N+L+N   K  +   +  +Y +M
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           +  GI P V   + + +   +  +V+ A     +M++  V     TY++ I+G    G +
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP-RVGLMPNVVTYNI 200
             A  + + +        +  Y+ LI G CK  K++ A ++ + +     L+P+   Y +
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +I G+C  G++D A  L  +M   G+  N    N+L+ G  +  E  +   ++ RM + N
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 142/258 (55%), Gaps = 5/258 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DE+  +   M +     + + YSTLI G C +G +D A  ++  M  NG   +VV YNT+
Sbjct: 272 DESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 331

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NGY +   +EE L L+  M  +G R TVV+YN L  GLFE  +V+ A+ +++ +   D 
Sbjct: 332 LNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDC 390

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A++ TY   + GLCKNGY+ +A  +       + +L   AYS +I+GLC+ G+L+    
Sbjct: 391 CADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAG 450

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   + + G  PN    N +I+GF    +++ A   F +M +KG  P  VT+NTL+ G  
Sbjct: 451 VLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 510

Query: 242 RNNETSK----VVELLHR 255
           +    S+    V E+LH+
Sbjct: 511 KAERFSEAYALVKEMLHK 528



 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 133/245 (54%), Gaps = 1/245 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G +P    Y++L++    + + D A   F+  +  G   N+ TYN LI   C+ K  +++
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M  +G  P V +Y TL + L +   +  ALKLFDEM    V  + + YN  IDG
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228

Query: 135 LCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
             K G I+ A+E++ R L+       I +Y+ +I+GLCK GK + ++E++  + +     
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++ TY+ +IHG C  G +D A  ++ +M   GV+P+ V +NT++ G +R     + +EL 
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348

Query: 254 HRMDE 258
             M++
Sbjct: 349 KVMEK 353



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 134/260 (51%), Gaps = 2/260 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA          G+ PN   Y+ LI   C   + D+A+EL   M   G   +V +Y TL
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSD 120
           IN   K   + ++L L+ EM  +G+ P V  YN L  G F+   + +A ++++ + +   
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     +YN  I+GLCK G   E+ E++  ++  +    +  YS LI GLC  G L+ A 
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +++ +   G+ P+VV YN M++G+   G++++  +L+  ME +G     V++N L+ G 
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGL 369

Query: 241 IRNNETSKVVELLHRMDERN 260
             N +  + + +   + E++
Sbjct: 370 FENAKVDEAISIWELLPEKD 389



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 112/222 (50%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           + F YS++I+G C  G +D    +   M  +GC  N    N +ING+ +   +E++L  +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M+SKG  PTVVTYNTL +GL +  +   A  L  EM H        TY+  ++GLC+ 
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             +  A  L+        +  ++ ++ +I GLC  GK+E A +L+  + +   +PN+VT+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           N ++ GF      ++A  ++  +     + NC        GC
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQSWSSSNCYYMEHTCQGC 649



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 103/186 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE + +LD M + G +PN  V + +I+GF    +++ A   F +M   GC   VVTYNT
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K +   E+  L  EML KG +P ++TY+ L +GL +  +++ AL L+ +     
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC +G + +A +L+  ++  KC   +  ++ L++G  K+   E A 
Sbjct: 565 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERAS 624

Query: 181 ELFQSL 186
           +++  +
Sbjct: 625 KIWDHI 630



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 66/117 (56%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+  M+ +G +PN   YS L++G C   ++D A  L+      G   +V  +N +I
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 576

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +G C +  VE++L LYSEM  +   P +VT+NTL  G +++   E A K++D +  S
Sbjct: 577 HGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS 633



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 2/193 (1%)

Query: 69  KDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           K+   +L+++  +    G   T   ++ +   LF+   V H  ++ + ++          
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDV 80

Query: 128 YNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
             T I    KN    +A ++F+ +  +  C+ GI +Y+ L++ L +  K + A   F   
Sbjct: 81  ALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF 140

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +GL PN+ TYNI+I   C   Q DKA +L   M  +G +P+  ++ TL+    +N   
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 247 SKVVELLHRMDER 259
           S  ++L   M ER
Sbjct: 201 SDALKLFDEMPER 213



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 50/82 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L    +++G +P+  +++ +I G C +G+++ A +L+  M    C+ N+VT+NT
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609

Query: 61  LINGYCKTKDVEESLNLYSEML 82
           L+ G+ K +D E +  ++  +L
Sbjct: 610 LMEGFYKVRDFERASKIWDHIL 631


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   M+ RGV P+   +S+LI      G +D+A   F  M  +G + + V Y  LI
Sbjct: 308 EAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILI 367

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYC+   + E+L +  +ML +G    VV YNT+ +GL +   +  A  LFDEM    V 
Sbjct: 368 NGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVV 427

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+ T I G CK G + +A  LF  +     +  I  Y+ LIDG CK  ++E A EL
Sbjct: 428 PDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANEL 487

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +    + PN ++Y I+++G+CN G + +A  L+ +M  KG+ P  VT NT++ G  R
Sbjct: 488 WNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCR 547

Query: 243 NNETSKVVELLHRM 256
           + + SK  E L +M
Sbjct: 548 SGDLSKADEFLGKM 561



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 140/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +++ M  +G++P  F Y+ +I+G C  G   RA+ +F  M   G   +  TYNT
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  +  E+ +++S+ML +G+ P ++++++L         ++ AL  F +M+ S 
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   I+G C+NG + EA E+   +    C L + AY+ +++GLCK   L  A 
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G++P+  T+  +IHG C +G M KA  LF  M  K + P+ VT+N L+ G 
Sbjct: 416 ALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGF 475

Query: 241 IRNNETSKVVELLHRMDER 259
            +  E  K  EL + M  R
Sbjct: 476 CKTTEMEKANELWNEMISR 494



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 146/261 (55%), Gaps = 4/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ L D M++RGV P+   ++TLI G C  G + +A  LF  M       ++VTYN 
Sbjct: 411 LADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNI 470

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CKT ++E++  L++EM+S+ I P  ++Y  L +G   +  V  A +L+DEM    
Sbjct: 471 LIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKG 530

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLET 178
           +     T NT I G C++G + +A E     +++   +G ++  Y+ LI+G  K   ++ 
Sbjct: 531 IKPTLVTCNTVIKGYCRSGDLSKADEFLG--KMISEGVGPDSITYNTLINGFVKGEYMDK 588

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A+ L   +   GL P+VVTYN++++GFC  G+M +A  +   M  +G+ P+  T+ TL+ 
Sbjct: 589 AFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLIN 648

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G +  +   +       M +R
Sbjct: 649 GYVSQDNLKEAFRFHDEMLQR 669



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + D M+++G   +   Y+T+++G C    +  A  LF  M   G + +  T+ T
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTT 435

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  ++ ++L+L+  M  K I+P +VTYN L  G  +  ++E A +L++EM    
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +Y   ++G C  G++ EA  L+  +     +  +   + +I G C+ G L  A 
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKAD 555

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    +   G+ P+ +TYN +I+GF     MDKA  L   ME KG+ P+ VT+N ++ G 
Sbjct: 556 EFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGF 615

Query: 241 IRNNETSKVVELLHRMDER 259
            R     +   +L +M ER
Sbjct: 616 CRQGRMQEAELILRKMIER 634



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 122/229 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  L  +M Q+ ++P+   Y+ LIDGFC T E+++A EL+  M       N ++Y  
Sbjct: 446 MGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAI 505

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGYC    V E+  L+ EM+ KGI+PT+VT NT+  G      +  A +   +M    
Sbjct: 506 LVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEG 565

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  ++ TYNT I+G  K  Y+ +A  L   +     +  +  Y+ +++G C+ G+++ A 
Sbjct: 566 VGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAE 625

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            + + +   G+ P+  TY  +I+G+ +   + +A     +M  +G  P+
Sbjct: 626 LILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 129/260 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+    L  M Q+G+  +   Y+TLI+ +C  G +  A E+  SM   G    + TYN 
Sbjct: 201 IDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNA 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK      +  +++EMLS G+ P   TYNTL       +    A  +F +M H  
Sbjct: 261 VINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRG 320

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+ +  ++++ I    +NG++ +A   FR ++          Y+ LI+G C+ G +  A 
Sbjct: 321 VSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEAL 380

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   +   G   +VV YN +++G C    +  A+ LF +M  +GV P+  TF TL+ G 
Sbjct: 381 EIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGH 440

Query: 241 IRNNETSKVVELLHRMDERN 260
            +     K + L   M ++N
Sbjct: 441 CKEGNMGKALSLFGIMTQKN 460



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 118/236 (50%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
            V+  LI  +    +++   + F  +   G + ++   N+L+ G  K   V+ +  +Y+E
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           +   GI   V T N + + L + H+++       +M+   + A+  TYNT I+  C+ G 
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           + EA E+  ++     +  +  Y+ +I+GLCK G+   A  +F  +  +GL P+  TYN 
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           ++   C +    +A D+F DM  +GV+P+ ++F++L+    RN    + +     M
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM 351



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 125/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E +    ++ ++G   +    ++L+ G    G +D A E++  +  +G   NV T N 
Sbjct: 131 LNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNI 190

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  CK   +++      +M  KGI   +VTYNTL +       +  A ++ + M    
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I+GLCK G  V A  +F  +  +        Y+ L+   C+      A 
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +   G+ P++++++ +I     +G +D+A   F DM+  G+ P+ V +  L+ G 
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370

Query: 241 IRNNETSKVVELLHRMDER 259
            RN   S+ +E+  +M E+
Sbjct: 371 CRNGMMSEALEIRDKMLEQ 389



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           E  +SM     + N+V ++ LI  Y + + + E  + +  +  KG   ++   N+L  GL
Sbjct: 102 ESLISMSSTCGVDNLV-FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGL 160

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
            ++  V+ A ++++E+  S +     T N  ++ LCK+  I +       +        I
Sbjct: 161 VKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADI 220

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             Y+ LI+  C+ G L  A+E+  S+   GL P + TYN +I+G C  G+  +A  +F +
Sbjct: 221 VTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNE 280

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNN---ETSKVV-ELLHR 255
           M + G++P+  T+NTL++   RNN   E   +  ++LHR
Sbjct: 281 MLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHR 319


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 128/260 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M     +P+ + Y TL+DG C    ID A  L   M I+GC  + VT+N 
Sbjct: 185 VDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 244

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  D+     L   M  KG  P  VTYNTL HGL    ++E A+ L D M  S 
Sbjct: 245 LINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 304

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GL K G  ++ A +   +      +    YS LI GL K GK + A 
Sbjct: 305 CVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAM 364

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+ +       N + Y+ +I G C DG+ D+A ++  +M      PN  T+++LM G 
Sbjct: 365 QLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGF 424

Query: 241 IRNNETSKVVELLHRMDERN 260
                  K +E+   M + N
Sbjct: 425 FEAGNGHKAIEMWKDMAKHN 444



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD M   G  P+   ++ LI+G C  G++ R  +L  +M + GC  N VTYNT
Sbjct: 220 IDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNT 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    +E++++L   M+S    P VVTY T+ +GL +  +     ++   M+   
Sbjct: 280 LIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERG 339

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y+  I GL K G   EA +LF+ + V +CEL    YS +IDGLC+ GK + A 
Sbjct: 340 YHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEAL 399

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   +      PN  TY+ ++ GF   G   KA +++ DM       N V ++ L+ G 
Sbjct: 400 EVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGL 459

Query: 241 IRNNETSKVVELLHRM 256
            ++ +  + + +  +M
Sbjct: 460 CKDGKVKEAMMVWAQM 475



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 125/235 (53%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           ++L+D M  +G  PN   Y+TLI G CL G++++A  L   M  + C+ NVVTY T+ING
Sbjct: 259 AKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIING 318

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
             K     +   + + M  +G       Y+ L  GLF+  + + A++LF EM   +    
Sbjct: 319 LVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELN 378

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           T  Y+  IDGLC++G   EA E+   +   +C+     YS L+ G  + G    A E+++
Sbjct: 379 TIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWK 438

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + +     N V Y+++IHG C DG++ +A  ++  M  KG  P+ V + +++ G
Sbjct: 439 DMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMING 493



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 121/232 (52%), Gaps = 2/232 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           + +R+L LM +RG   N +VYS LI G    G+   A +LF  M +  C  N + Y+ +I
Sbjct: 327 DGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVI 386

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+    +E+L + SEM +   +P   TY++L  G FE      A++++ +M   +  
Sbjct: 387 DGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFT 446

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                Y+  I GLCK+G + EA  ++  +    C+  + AY  +I+GL   G +E A +L
Sbjct: 447 QNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQL 506

Query: 183 FQSL--PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +  +        P+VVTYNI+++  C    + +A DL   M  +G  P+ VT
Sbjct: 507 YNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT 558



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 3/212 (1%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEML-SKG--IRPTVVTYNTLFHGLFEIHQVE 107
           C   V ++N+++N   +      +L  Y+ ++ +KG  I P V+T+N +   + ++  V+
Sbjct: 127 CKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVD 186

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            A+++F +M  S    +  TY T +DGLCK   I EA  L   +++  C      ++ LI
Sbjct: 187 DAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLI 246

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           +GLCK G L    +L  ++   G  PN VTYN +IHG C  G+++KA  L   M +    
Sbjct: 247 NGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCV 306

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           PN VT+ T++ G ++         +L  M+ER
Sbjct: 307 PNVVTYGTIINGLVKQGRALDGARVLALMEER 338



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 23/236 (9%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  +L  M     +PNA+ YS+L+ GF   G   +A E++  M  +    N V Y+ L
Sbjct: 396 DEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVL 455

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--QHS 119
           I+G CK   V+E++ ++++ML KG +P VV Y ++ +GL     VE AL+L++EM  Q  
Sbjct: 456 IHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEP 515

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRT----------------LRVLKCEL----- 158
           D   +  TYN  ++ LCK   I  A +L  +                LR L+ +L     
Sbjct: 516 DSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQD 575

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           G E    L+  L K  ++  A ++ + + +  L P   T+  ++   CN  ++  A
Sbjct: 576 GREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAA 631


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M   GV P+ + Y+ LID FC  G I++A+ LF  M   GC   VVTY  
Sbjct: 304 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y K K V ++ +++  M+  G RP  VTY  L  GL +   +  A +++ ++  + 
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423

Query: 121 VAAETS----------------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
            +A++                 TY   +DGLCK   +  A EL   +    CE     Y 
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK GK+++A E+F  + + G +P+V TY  +I     DG++D A  +   M   
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              PN VT+  ++ G  R  E+ K ++LL  M+E+ 
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579



 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 16/271 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +L+  M+++G  P+   YS +I   C   ++++A  LF  M + G   +V TY  L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   +E++  L+ EM S G  PTVVTY  L H   +  QV  A  +F  M  +  
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL----------RVLKCE------LGIEAYSC 165
                TY   +DGLCK G I +A E++  L              CE        +  Y  
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DGLCK  K++ A EL  ++   G  PN + Y+ +I GFC  G++D A ++FL M   G
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             P+  T+ +L+    ++      +++L +M
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 123/251 (49%), Gaps = 16/251 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---------------- 46
           +A+ +   M+  G RPN   Y  L+DG C  G I +A E++  +                
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 47  DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           D +    NVVTY  L++G CK   V+ +  L   MLS G  P  + Y+ L  G  +  ++
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           + A ++F +M          TY + ID + K+G +  A ++   +    C   +  Y+ +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           IDGLC+IG+ E A +L   +   G  PNVVTY  +I G    G++D + DLF  M  KG 
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 227 APNCVTFNTLM 237
           +PN VT+  L+
Sbjct: 616 SPNYVTYRVLI 626



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 111/205 (54%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   Y  L+DG C   ++D A EL  +M  +GC  N + Y+ LI+G+CK   ++ +  +
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M   G  P+V TY +L   +F+  +++ A+K+  +M          TY   IDGLC+
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G   +A +L   +    C   +  Y+ LIDGL K GK++ + +LF  + R G  PN VT
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDME 222
           Y ++I+  C  G +DKA  L  +M+
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMK 646



 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 3/255 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M+  G  PN  VY  LIDGFC  G+ID A+E+F+ M   G + +V TY +
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 519

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K   ++ ++ + S+ML     P VVTY  +  GL  I + E ALKL   M+   
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   IDGL K G I  + +LF  +    C      Y  LI+ LC  G L+ A 
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + +      +  Y   I GF        +  +  +ME+ G  P    +  +++ C
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYG-MLIDC 696

Query: 241 IRNNETSKVVELLHR 255
                  ++   LH+
Sbjct: 697 FSKAGRLEIAMELHK 711



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 124/297 (41%), Gaps = 43/297 (14%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA   L  M      PN   Y TL+ GF    ++   + +   M   GC  N   +N+L
Sbjct: 124 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 183

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG---------------------- 99
           ++ YC  KD   +  L + M + G  P  V YN +F G                      
Sbjct: 184 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYG 242

Query: 100 --------------------LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
                               L  + + + A +L  EM       +TSTY+  I  LC   
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            + +A  LF+ ++++     +  Y+ LID  CK G +E A  LF+ +  VG  P VVTY 
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +IH +    Q+ +A+D+F  M   G  PN VT+  L+ G  +    SK  E+  ++
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 22/275 (8%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI------DRARELFVSMDINGCMHNVVT 57
           A +LL+ M   G  P   VY+  I   C   ++      D A +++  M    C+ N V 
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
                   C     +++  L  EM+ KG  P   TY+ +   L    +VE A  LF EM+
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  +  TY   ID  CK G I +A  LF  +R + C   +  Y+ LI    K  ++ 
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 375

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM---------------- 221
            A ++F  +   G  PN VTY  ++ G C  G + KA +++  +                
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   +APN VT+  L+ G  + ++     ELL  M
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 470



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++   M+      N    +      C  G+ D+A +L   M   G + +  TY+ 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   C    VE++  L+ EM   G+ P V TY  L     +   +E A  LF+EM+   
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   I    K   + +A ++F  +    C      Y  L+DGLCK G +  A+
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 181 ELFQSL----------------PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           E++  L                 R  L PNVVTY  ++ G C   ++D AH+L   M + 
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G  PN + ++ L+ G  +  +     E+  +M +
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 41/290 (14%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LD++ +   + +  + + +I G       D A      M  N C+ NVVTY TL++G+ K
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K +     + + M+++G  P    +N+L H         +A KL + M           
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 128 YNTFIDGLCKN----------------GYIVEAAELFRTLRV---LKCELGI-------- 160
           YN FI  +C                  G ++ A  +   + V    +C  G+        
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 161 --------------EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           YS +I  LC   K+E A+ LFQ +  VG+ P+V TY I+I  FC
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G +++A  LF +M + G +P  VT+  L+   ++  +  +  ++ HRM
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 35/261 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++L  M++    PN   Y+ +IDG C  GE ++A +L   M+  GC  NVVTY  
Sbjct: 530 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA----------- 109
           LI+G  K   ++ SL+L+++M  KG  P  VTY  L + L     ++ A           
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 649

Query: 110 ----------------------LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                                 L + +EM+          Y   ID   K G +  A EL
Sbjct: 650 WPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 709

Query: 148 FRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            + +  +   +  +   Y+ LI  LC   ++E A+ L+  + R G +P +  +  +I G 
Sbjct: 710 HKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769

Query: 206 CNDGQMDKAHDLFLDMEAKGV 226
               + D+A  L   +  +GV
Sbjct: 770 VEVKKWDEALQLCYGICHEGV 790



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 7/174 (4%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G RP+ VTYN L   L    QV+   ++  EM  S    +  T   F   LCK G   +A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 145 AELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
            ++       + +  ++   C  +I GL +    + A      +     +PNVVTY  ++
Sbjct: 95  LDMIE-----REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            GF    Q+     +   M  +G  PN   FN+L+       + +   +LL+RM
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 144/262 (54%), Gaps = 6/262 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ +L  M +RG++P+ + Y+ +I G C  G   +A +LF  M   G   + VTYN LI
Sbjct: 133 EATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLI 192

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-- 120
           NG CK   + ++  ++  ML KG R  VV+YNTL  GL    +++ A+KLF  +      
Sbjct: 193 NGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNY 252

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
           V  +  T+NT I GLCK G + +A E++ T+ + +   G   ++C  LI    K G ++ 
Sbjct: 253 VEPDVITFNTVIQGLCKEGRLDKAVEIYDTM-IERGSFG-NLFTCHILIGEYIKSGIIDK 310

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A EL++ + ++GL+P+  TY++MI GFC    ++ A  LF  M+  G++P    +NTLM 
Sbjct: 311 AMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMA 370

Query: 239 GCIRNNETSKVVELLHRMDERN 260
              + +   +   L   M E N
Sbjct: 371 SLCKESSLEQARRLFQEMKESN 392



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 136/261 (52%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  LL  M      PN+F Y  L+DG C  G ++ A  L   M   G   +VV Y+T
Sbjct: 26  LEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYST 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C    ++    L+ EML KGI P VV Y+ L +G  +      A  +   M    
Sbjct: 86  LISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERG 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I GLCK+G   +A +LF  +     E     Y+ LI+GLCK G +  A+
Sbjct: 146 IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAF 205

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFNTLML 238
           ++F+++   G    VV+YN +I G CN+G++D+A  LF  +   G  V P+ +TFNT++ 
Sbjct: 206 KIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQ 265

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  +     K VE+   M ER
Sbjct: 266 GLCKEGRLDKAVEIYDTMIER 286



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 128/243 (52%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           + P+   Y+T+I+G C    +++A +L V M+ + C  N  TY  L++G CK   VEE++
Sbjct: 6   ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EM  KG+   VV Y+TL  G      ++    LFDEM    ++     Y+  I+G 
Sbjct: 66  RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK G   EA  +  T+     +  +  Y+C+I GLCK G+   A +LF  +   G  P+ 
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTYN++I+G C +G +  A  +F  M  KG     V++NTL++G   N +  + ++L   
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245

Query: 256 MDE 258
           + E
Sbjct: 246 LLE 248



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 141/258 (54%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +DEA +L   +++ G  V P+   ++T+I G C  G +D+A E++ +M   G   N+ T 
Sbjct: 236 LDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTC 295

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           + LI  Y K+  +++++ L+  +   G+ P+  TY+ +  G  ++H +  A  LF  M+ 
Sbjct: 296 HILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKI 355

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S ++     YNT +  LCK   + +A  LF+ ++   CE    +++ +IDG  K G + +
Sbjct: 356 SGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHS 415

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A EL   + ++GL P+  TY+  I+     GQM++A   F  M A G+ P+   +++L+ 
Sbjct: 416 AKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIK 475

Query: 239 GCIRNNETSKVVELLHRM 256
           G   N+E  +V+ LL +M
Sbjct: 476 GFGLNDEIEEVINLLRQM 493



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 106/208 (50%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           + ++V+YNT+ING CK K +E++++L  EM      P   TY  L  GL +  +VE A++
Sbjct: 7   LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           L  EM+   +  +   Y+T I G C  G +     LF  +        +  YSCLI+G C
Sbjct: 67  LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G    A  +  ++   G+ P+V TY  MI G C DG+  KA DLF  M  KG  P+ V
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
           T+N L+ G  +        ++   M E+
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEK 214



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 131/253 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + D MI+RG   N F    LI  +  +G ID+A EL+  +   G + +  TY+ 
Sbjct: 273 LDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSV 332

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+CK   +  +  L+S M   G+ PT+  YNTL   L +   +E A +LF EM+ S+
Sbjct: 333 MIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESN 392

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T ++N  IDG  K G I  A EL   ++ +        YS  I+ L K+G++E A 
Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F S+   G+ P+   Y+ +I GF  + ++++  +L   M   GV  +    N+++   
Sbjct: 453 GAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFL 512

Query: 241 IRNNETSKVVELL 253
             + E   V+ELL
Sbjct: 513 CNSAEHLHVMELL 525



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 92/174 (52%)

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I P +V+YNT+ +GL +  ++E A+ L  EM+ S     + TY   +DGLCK G + EA 
Sbjct: 6   ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L   ++    E+ +  YS LI G C  G L+    LF  +   G+ PNVV Y+ +I+GF
Sbjct: 66  RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G   +A  +   M  +G+ P+  T+  ++ G  ++    K ++L   M E+
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 80/144 (55%)

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M+  ++  +  +YNT I+GLCK   + +A +L   +    CE     Y  L+DGLCK G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +E A  L   + R GL  +VV Y+ +I GFC+ G +D+   LF +M  KG++PN V ++ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           L+ G  +     +   +LH M ER
Sbjct: 121 LINGFCKKGLWREATAVLHTMTER 144



 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA    D MI  G+ P+  VY +LI GF L  EI+    L   M   G + ++   N+
Sbjct: 448 MEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNS 507

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           ++   C + +    + L     S+    T ++ + L   L +I +    L++
Sbjct: 508 ILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKL---LMKIQKFNPKLQI 556


>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 418

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 136/234 (58%), Gaps = 4/234 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  N  + N VT+ T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLET 178
           +  +  TY T IDG CK G + E A  +R  R++K  + ++  AY+ LI GLC+ G+   
Sbjct: 307 LKPDKITYTTLIDGNCKEGDL-ETAFKYRK-RMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           A ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 127/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A      M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 127/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML   + P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA++  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     +   RM + N
Sbjct: 319 DGNCKEGDLETAFKYRKRMIKEN 341



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 116/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A ELF  +    L+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M   GV P+ + Y+ LID FC  G I++A+ LF  M   GC   VVTY  
Sbjct: 304 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y K K V ++ +++  M+  G RP  VTY  L  GL +   +  A +++ ++  + 
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423

Query: 121 VAAETS----------------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
            +A++                 TY   +DGLCK   +  A EL   +    CE     Y 
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK GK+++A E+F  + + G +P+V TY  +I     DG++D A  +   M   
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              PN VT+  ++ G  R  E+ K ++LL  M+E+ 
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579



 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 16/271 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +L+  M+++G  P+   YS +I   C   ++++A  LF  M + G   +V TY  L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   +E++  L+ EM S G  PTVVTY  L H   +  QV  A  +F  M  +  
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL----------RVLKCE------LGIEAYSC 165
                TY   +DGLCK G I +A E++  L              CE        +  Y  
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DGLCK  K++ A EL  ++   G  PN + Y+ +I GFC  G++D A ++FL M   G
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             P+  T+ +L+    ++      +++L +M
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 124/253 (49%), Gaps = 16/253 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           + +A+ +   M+  G RPN   Y  L+DG C  G I +A E++  +              
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433

Query: 47  --DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
             D +    NVVTY  L++G CK   V+ +  L   MLS G  P  + Y+ L  G  +  
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +++ A ++F +M          TY + ID + K+G +  A ++   +    C   +  Y+
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +IDGLC+IG+ E A +L   +   G  PNVVTY  +I G    G++D + DLF  M  K
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613

Query: 225 GVAPNCVTFNTLM 237
           G +PN VT+  L+
Sbjct: 614 GCSPNYVTYRVLI 626



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 111/205 (54%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   Y  L+DG C   ++D A EL  +M  +GC  N + Y+ LI+G+CK   ++ +  +
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M   G  P+V TY +L   +F+  +++ A+K+  +M          TY   IDGLC+
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G   +A +L   +    C   +  Y+ LIDGL K GK++ + +LF  + R G  PN VT
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDME 222
           Y ++I+  C  G +DKA  L  +M+
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMK 646



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 3/255 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M+  G  PN  VY  LIDGFC  G+ID A+E+F+ M   G + +V TY +
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 519

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K   ++ ++ + S+ML     P VVTY  +  GL  I + E ALKL   M+   
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   IDGL K G I  + +LF  +    C      Y  LI+ LC  G L+ A 
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + +      +  Y   I GF        +  +  +ME+ G  P    +  +++ C
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYG-MLIDC 696

Query: 241 IRNNETSKVVELLHR 255
                  ++   LH+
Sbjct: 697 FSKAGRLEIAMELHK 711



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 124/297 (41%), Gaps = 43/297 (14%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA   L  M      PN   Y TL+ GF    ++   + +   M   GC  N   +N+L
Sbjct: 124 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 183

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG---------------------- 99
           ++ YC  KD   +  L + M + G  P  V YN +F G                      
Sbjct: 184 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYG 242

Query: 100 --------------------LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
                               L  + + + A +L  EM       +TSTY+  I  LC   
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            + +A  LF+ ++++     +  Y+ LID  CK G +E A  LF+ +  VG  P VVTY 
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +IH +    Q+ +A+D+F  M   G  PN VT+  L+ G  +    SK  E+  ++
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 22/275 (8%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI------DRARELFVSMDINGCMHNVVT 57
           A +LL+ M   G  P   VY+  I   C   ++      D A +++  M    C+ N V 
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
                   C     +++  L  EM+ KG  P   TY+ +   L    +VE A  LF EM+
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  +  TY   ID  CK G I +A  LF  +R + C   +  Y+ LI    K  ++ 
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 375

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM---------------- 221
            A ++F  +   G  PN VTY  ++ G C  G + KA +++  +                
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   +APN VT+  L+ G  + ++     ELL  M
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 470



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++   M+      N    +      C  G+ D+A +L   M   G + +  TY+ 
Sbjct: 234 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 293

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   C    VE++  L+ EM   G+ P V TY  L     +   +E A  LF+EM+   
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   I    K   + +A ++F  +    C      Y  L+DGLCK G +  A+
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 181 ELFQSL----------------PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           E++  L                 R  L PNVVTY  ++ G C   ++D AH+L   M + 
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G  PN + ++ L+ G  +  +     E+  +M +
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 41/290 (14%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LD++ +   + +  + + +I G       D A      M  N C+ NVVTY TL++G+ K
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K +     + + M+++G  P    +N+L H         +A KL + M           
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 128 YNTFIDGLCKN----------------GYIVEAAELFRTLRV---LKCELGI-------- 160
           YN FI  +C                  G ++ A  +   + V    +C  G+        
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 161 --------------EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           YS +I  LC   K+E A+ LFQ +  VG+ P+V TY I+I  FC
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G +++A  LF +M + G +P  VT+  L+   ++  +  +  ++ HRM
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 7/174 (4%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G RP+ VTYN L   L    QV+   ++  EM  S    +  T   F   LCK G   +A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 145 AELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
            ++       + +  ++   C  +I GL +    + A      +     +PNVVTY  ++
Sbjct: 95  LDMIE-----REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            GF    Q+     +   M  +G  PN   FN+L+       + +   +LL+RM
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYNTLING 64
           +L+ M   G  P A VY  LID F   G ++ A EL   M    +    +   Y +LI  
Sbjct: 674 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 733

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            C    VEE+  LYSEM  +G  P +  +  L  GL E+ + + AL+L
Sbjct: 734 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 146/296 (49%), Gaps = 41/296 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LLD M +RGV+ +  ++STLI G C  G ID A E F SM    C  NV+TYNT
Sbjct: 15  VDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVITYNT 73

Query: 61  LINGYCKTKDVEESLNLYSEM-----LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           ++NG CK   ++E L L+ +M      S G  P V++Y+T+   L +  +V+ A + F  
Sbjct: 74  VVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKR 133

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M+    A    TY++ IDGLCK   + EA  L   L+          Y+ +++G  + GK
Sbjct: 134 MRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGK 193

Query: 176 -----------------------------------LETAWELFQSLPRVGLMPNVVTYNI 200
                                               E A + F+ L + G  PNVVTYN+
Sbjct: 194 PSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNV 253

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +HG C  G++D+A+ + L+M    V P+ +T+++++ G  +     K  ++  RM
Sbjct: 254 AVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 309



 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 138/240 (57%), Gaps = 6/240 (2%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           +Y+T+I+GFC  G++D+A EL   M   G   +V+ ++TLI G C+   ++E+L  +  M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA-----ETSTYNTFIDGLC 136
             +   P V+TYNT+ +GL + ++++  L+LFD+M+    A+     +  +Y+T ID LC
Sbjct: 61  -GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K   + +A E F+ +R + C   +  YS LIDGLCK+ +++ A+ L   L    ++P  +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            YN +++GF   G+  +  +L L M+ KG   N + FN ++    +N+E  K  +   R+
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 123/244 (50%), Gaps = 5/244 (2%)

Query: 1   MDEASRLLDLMIQR-----GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNV 55
           +DE   L D M +R     G  P+   YST+ID  C    +D+A E F  M   GC  NV
Sbjct: 84  IDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNV 143

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           VTY++LI+G CK   V+E+ +L  ++  + + P  + YN + +G     +    L+L   
Sbjct: 144 VTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLH 203

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M+          +N  +  L KN    +A + F  L     +  +  Y+  + GLCK GK
Sbjct: 204 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGK 263

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A+ +   +    + P+V+TY+ +I GFC  G+MDKA D+F  M      P+ VTF T
Sbjct: 264 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 323

Query: 236 LMLG 239
           L+ G
Sbjct: 324 LLHG 327



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 118/207 (57%), Gaps = 6/207 (2%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y T+ING+CK   V+++  L  EM  +G++  V+ ++TL  GL    +++ AL+ F  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELF-----RTLRVLKCELGIEAYSCLIDGLCK 172
             + +    TYNT ++GLCK   I E  ELF     R      CE  + +YS +ID LCK
Sbjct: 62  E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
             +++ A+E F+ +  VG  PNVVTY+ +I G C   ++D+A+ L + ++ + + P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           +N ++ G  R  + S+ +ELL  M E+
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEK 207



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 127/260 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  +    + P A  Y+ +++GF   G+     EL + M   G   N++ +N 
Sbjct: 159 VDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNA 218

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++   K  + E++   +  +L  G +P VVTYN   HGL +  +V+ A ++  EM  S 
Sbjct: 219 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESK 278

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY++ IDG CK G + +A ++F  + V +C      +  L+ G  +  K   A+
Sbjct: 279 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 338

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   G +P + TYN+++   C    ++ A +++  M+ K   P+  T+  L+   
Sbjct: 339 RVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCL 398

Query: 241 IRNNETSKVVELLHRMDERN 260
            R     +  E L  M+  N
Sbjct: 399 CRARRVDEAKEFLDVMEADN 418



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 120/237 (50%), Gaps = 16/237 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+L  M++  V P+   YS++IDGFC  G +D+A ++F  M ++ C+ + VT+ T
Sbjct: 264 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 323

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+ + K   E+  ++ +M++ G  P + TYN L   +     VE AL+++ +M+   
Sbjct: 324 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 383

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +TY   I  LC+   + EA E    +              L++ LCK G+++ A 
Sbjct: 384 RQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 443

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                     ++ NVV         C  G+ D+A ++   M  KGV P+  T+  ++
Sbjct: 444 ---------SVLDNVVE-------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVL 484



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 111/213 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +  + +++ G +PN   Y+  + G C  G++D A  + + M  +    +V+TY+++
Sbjct: 230 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSI 289

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   ++++ ++++ M+     P  VT+ TL HG  E  +   A ++ ++M ++  
Sbjct: 290 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 349

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  +D +C    +  A E++  ++  K +     Y+ LI  LC+  +++ A E
Sbjct: 350 IPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKE 409

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
               +    ++PN    + ++   C  G++D+A
Sbjct: 410 FLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 442



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 19/242 (7%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+ + M+  G  P    Y+ L+D  C    ++ A E++  M       +  TY  LI
Sbjct: 336 EAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLI 395

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C+ + V+E+      M +  + P     + L   L +  +V+ A  + D +      
Sbjct: 396 QCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE---- 451

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-YSCLIDGLCKIGKLETAWE 181
                       +CK G   EA E+   + VLK     EA Y  ++  LC + ++++A  
Sbjct: 452 ------------ICKAGEPDEAVEVIEQM-VLKGVRPDEATYVAVLRSLCGLDRVDSAIA 498

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F+ +   G  P +VTY ++I   C+    D A  +F  M A G  P   T  TL   C+
Sbjct: 499 EFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLS-SCL 557

Query: 242 RN 243
           R+
Sbjct: 558 RD 559



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  +++ M+ +GVRP+   Y  ++   C    +D A   F  M   GC   +VTY  L
Sbjct: 459 DEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLL 518

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           I   C     +++  ++  M++ G  P   T  TL
Sbjct: 519 IGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/202 (19%), Positives = 82/202 (40%), Gaps = 16/202 (7%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++  +P+A  Y+ LI   C    +D A+E    M+ +  + N    + L+   CK  +
Sbjct: 379 MKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGE 438

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E+ ++   ++                 + +  + + A+++ ++M    V  + +TY  
Sbjct: 439 VDEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVA 482

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +  LC    +  A   F  +    C  G+  Y+ LI   C     + A+ +F+++   G
Sbjct: 483 VLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAG 542

Query: 191 LMPNVVTYNIMIHGFCNDGQMD 212
             P   T   +     + G  D
Sbjct: 543 FTPQAQTMRTLSSCLRDAGYQD 564



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 19/159 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA-------------------RE 41
           +DEA   LD+M    V PN  +   L++  C  GE+D A                    E
Sbjct: 404 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVE 463

Query: 42  LFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
           +   M + G   +  TY  ++   C    V+ ++  + +M S+G  P +VTY  L     
Sbjct: 464 VIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEAC 523

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
                + A ++F+ M  +    +  T  T    L   GY
Sbjct: 524 SADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGY 562


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL  +M   GV+P+ + YS LI+G C   ++D A  LF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI  LC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  PN VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 128/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GEI  A+ +F S+   G   +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L S M + G++P V TY+ L +GL +  +++ A  LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E++R +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+    +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL +G  +I  ++   +L   MQ
Sbjct: 139 FNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A  LF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   +I    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A  LF  +   GL+PN V
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   G +P+ + YS LI+G C  G++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK + V+ ++ +Y +MLS+G+ P ++TYNTL +GL +  +++    L DEM  + 
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y T IDG CK G +  A EL   +      L   AY+ LI  LC+ G+   A 
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++I+ FC       A  L  +M+  G  P  VT
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + D + + G+RP+   ++TLI+G+   G++D    L  +M  +G   +V TY+ 
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSI 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++E+  L++EML  G+ P  VT+ TL HG  +  +V+ A++++ +M    
Sbjct: 212 LINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TYNT I GLCK G + +  +L   + +   +    +Y+ LIDG CK G LE A 
Sbjct: 272 LSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIAL 331

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + +  +  + V Y  +I   C +G+   A  +  +M + G+ P+  T+  ++   
Sbjct: 332 ELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEF 391

Query: 241 IRNNETSKVVELLHRM 256
            +  ++    +LL  M
Sbjct: 392 CKKRDSKTASKLLREM 407



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 127/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GE+  A+ +F ++   G   +VV++NTLINGY K  D++E 
Sbjct: 131 GYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L S M + G +P V TY+ L +GL +  +++ A +LF+EM  + +     T+ T I G
Sbjct: 191 FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKN  +  A E+++ +        +  Y+ LI GLCK G+L+   +L   +   GL P+
Sbjct: 251 HCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            ++Y  +I G C +G ++ A +L   M  + +  + V +  L+    R    S   ++L 
Sbjct: 311 KISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS + + +++ +G  R + +V+S L+  +  +G +  A + F     +       T  
Sbjct: 46  DSASDVFEAILETKGTQRSDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++    + +  +   + Y E+L  G   ++  +N L     +  ++  A  +FD +   
Sbjct: 106 KVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT I+G  K G + E   L   +     +  +  YS LI+GLCK GKL+ A
Sbjct: 166 GLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ELF  +   GL+PN VT+  +IHG C + ++D A +++  M ++G++P+ +T+NTL+ G
Sbjct: 226 NELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRM 256
             +  E  +V +L+  M
Sbjct: 286 LCKKGELKQVHDLIDEM 302



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 42/246 (17%)

Query: 51  CMHN-VVTYNTLINGYCKTKDVEESLNLYSEML-SKGI-RPTVVTYNTLFHGLFEIHQVE 107
           C H  ++   +LI      K  + + +++  +L +KG  R     ++ L     E   V 
Sbjct: 24  CTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFSGLMIAYLESGFVR 83

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY--SC 165
            A++ F   +   +     T    ++ L +  Y     + ++   VL+C      Y  + 
Sbjct: 84  DAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYK--EVLECGYPASLYFFNI 141

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVV----------------------------- 196
           L+   CK G++  A  +F ++ + GL P+VV                             
Sbjct: 142 LMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASG 201

Query: 197 ------TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
                 TY+I+I+G C +G++D+A++LF +M   G+ PN VTF TL+ G  +N +    +
Sbjct: 202 AQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAM 261

Query: 251 ELLHRM 256
           E+  +M
Sbjct: 262 EIYKQM 267


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RLLD M++ G++ N F+ ++LI+G+C  GEI  A  +   M       +  +YNT
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC+     E+ NL  +ML +GI PTV+TYNTL  GL  +   + AL+++  M    
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 467

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +   Y+T +DGL K      A+ L++ +           ++ +I GLCK+GK+  A 
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +  +G  P+ +TY  +I G+C    + +A  +   ME + ++P+   +N+L+ G 
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587

Query: 241 IRNNETSKVVELLHRMDER 259
            ++    +V +LL  M  R
Sbjct: 588 FKSRRLVEVTDLLTEMGIR 606



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 136/254 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+Q G+ P    Y+TL+ G C  G  D A +++  M   G   + V Y+TL+
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 479

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K ++ E +  L+ ++L++G   + +T+NT+  GL ++ ++  A ++FD+M+    +
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T IDG CK   + +A ++   +        IE Y+ LI GL K  +L    +L
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDL 599

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   GL PN+VTY  +I G+C +G +DKA   + +M   G++ N +  +T++ G  R
Sbjct: 600 LTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 659

Query: 243 NNETSKVVELLHRM 256
                +   L+ +M
Sbjct: 660 LGRIDEANLLMQKM 673



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 116/215 (53%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN  VY+  I G C TG++D AR  F  + + G + +  TY TLI+GY    +V+E+  L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EML +G+ P +VTYN L +GL +   V+ A +LF ++    +     TYNT IDG CK
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G +  A +L   +        +  YS LI+GLCK G +E + +L   + + G+   ++ 
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           Y  ++ G+   G+M K H L+  M  + ++   ++
Sbjct: 892 YCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAIS 926



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 128/250 (51%), Gaps = 1/250 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+ G+ P+ F+ S +++ FC  G++D A      M+  G   N+VTY++LINGY    D
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH-SDVAAETSTYN 129
           VE +  +   M  KG+   VVTY  L  G  +  +++ A K+   MQ  + +  +   Y 
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             IDG C+ G I +A  L   +  L  +  +   + LI+G CK G++  A  +   +   
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            L P+  +YN ++ G+C +G   +A +L   M  +G+ P  +T+NTL+ G  R       
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 250 VELLHRMDER 259
           +++ H M +R
Sbjct: 457 LQIWHLMMKR 466



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 128/281 (45%), Gaps = 32/281 (11%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRA---------------RELFVSMDIN------ 49
           M + G+  N  + ST++ G    G ID A                E F+  DI       
Sbjct: 638 MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQK 697

Query: 50  -------GC----MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
                   C    + N + YN  I G CKT  V+++   +S +  KG  P   TY TL H
Sbjct: 698 IADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIH 757

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           G      V+ A +L DEM    +     TYN  I+GLCK+  +  A  LF  L       
Sbjct: 758 GYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 817

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  Y+ LIDG CKIG ++ A++L   +   G+ P+VVTY+ +I+G C  G ++++  L 
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLL 877

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             M   GV    + + TL+ G IR+ E  K+ +L   M  R
Sbjct: 878 NQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIR 918



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 1/243 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+  +  M   GV PN   Y +LI+G+   G+++ A+ +   M   G   NVVTY  
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301

Query: 61  LINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI GYCK   ++E+  +   M  +  + P    Y  L  G     +++ A++L DEM   
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 361

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +       N+ I+G CK G I EA  +   +     +    +Y+ L+DG C+ G    A
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L   + + G+ P V+TYN ++ G C  G  D A  ++  M  +GVAP+ V ++TL+ G
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 481

Query: 240 CIR 242
             +
Sbjct: 482 LFK 484



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 32/291 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + D M   G  P+   Y TLIDG+C    + +A ++  +M+      ++  YN+
Sbjct: 523 MVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNS 582

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K++ + E  +L +EM  +G+ P +VTY  L  G  +   ++ A   + EM  + 
Sbjct: 583 LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 642

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR----------VLKCELGIEA-------- 162
           ++A     +T + GL + G I EA  L + +            LK ++   A        
Sbjct: 643 LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSL 702

Query: 163 --------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
                         Y+  I GLCK GK++ A   F  L   G +P+  TY  +IHG+   
Sbjct: 703 DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAA 762

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G +D+A  L  +M  +G+ PN VT+N L+ G  ++    +   L H++ ++
Sbjct: 763 GNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM-HNVVTYN 59
           ++ A  +L  M ++GV  N   Y+ LI G+C   ++D A ++   M     +  +   Y 
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+GYC+T  +++++ L  EML  G++  +   N+L +G  +  ++  A  +   M   
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++  ++ +YNT +DG C+ G+  EA  L   +     E  +  Y+ L+ GLC++G  + A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++  + + G+ P+ V Y+ ++ G       + A  L+ D+ A+G   + +TFNT++ G
Sbjct: 457 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  +  +  E+  +M +
Sbjct: 517 LCKMGKMVEAEEIFDKMKD 535



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 114/228 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++  LM++RGV P+   YSTL+DG       + A  L+  +   G   + +T+NT+
Sbjct: 454 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK   + E+  ++ +M   G  P  +TY TL  G  +   V  A K+   M+   +
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 573

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +     YN+ I GL K+  +VE  +L   + +      I  Y  LIDG CK G L+ A+ 
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            +  +   GL  N++  + M+ G    G++D+A+ L   M   G  P+
Sbjct: 634 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + D M + G  P+    ++L++     GE   A  ++  M   G + +V   + ++N +C
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 237

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   V+E+     +M + G+ P +VTY++L +G   +  VE A  +   M    V+    
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIGKLETAWELFQS 185
           TY   I G CK   + EA ++ R ++     +  E AY  LIDG C+ GK++ A  L   
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + R+GL  N+   N +I+G+C  G++ +A  +   M    + P+  ++NTL+ G  R   
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 246 TSKVVELLHRM 256
           TS+   L  +M
Sbjct: 418 TSEAFNLCDKM 428



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 1/200 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           ++ ++  Y +    + +L ++  M   G  P++ + N+L + L +  +   A  ++ +M 
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +  +    +  ++  CK+G + EAA   + +  L  E  I  Y  LI+G   +G +E
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTL 236
            A  + + +   G+  NVVTY ++I G+C   +MD+A  +   M E   + P+   +  L
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G  R  +    V LL  M
Sbjct: 339 IDGYCRTGKIDDAVRLLDEM 358



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           V+  ++  +   G    A  +F +M   G + ++ + N+L+N   K  +   +  +Y +M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           +  GI P V   + + +   +  +V+ A     +M++  V     TY++ I+G    G +
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP-RVGLMPNVVTYNI 200
             A  + + +        +  Y+ LI G CK  K++ A ++ + +     L+P+   Y +
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +I G+C  G++D A  L  +M   G+  N    N+L+ G  +  E  +   ++ RM + N
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 54/96 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A +L D MI+ G+ P+   YS LI+G C  G+I+R+ +L   M   G    ++ Y T
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           L+ GY ++ ++++   LY  M  + +  T +++  +
Sbjct: 895 LVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 140/257 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ + M+  G++P+   Y+ L+  FC  G +D+A  +  ++  N  +  + TY ++++
Sbjct: 360 AFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILD 419

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY K   ++++L ++  + + G+RP VV+YN+L  GL +  Q+E+A  + DEM  + V  
Sbjct: 420 GYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVP 479

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y    +G  + G + +A  +F+ ++     + I AY  L+   CK G ++ A E+F
Sbjct: 480 NERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVF 539

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q +   GL  N +TY  M+ G+   G++ KA DL  DM+  G   + + + + +  C R+
Sbjct: 540 QQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRS 599

Query: 244 NETSKVVELLHRMDERN 260
            +T +V E L  M E+ 
Sbjct: 600 GDTEEVTETLAVMREKK 616



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 127/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P A  Y  ++  F   G + +A ++   MD +G   N + Y  +++GY +  D   +
Sbjct: 301 GLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAA 360

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             ++ +M+S G++P +VTYN L H   +  +++ AL + + +Q + +     TY + +DG
Sbjct: 361 FKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDG 420

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
             K G+I +A E+F  ++      G+ +Y+ L+ GL K  ++E A  +   +   G++PN
Sbjct: 421 YVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPN 480

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             +Y  +  G+   G ++KA  +F  M+ + +A + V +  L+  C ++    + VE+  
Sbjct: 481 ERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQ 540

Query: 255 RM 256
           ++
Sbjct: 541 QI 542



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A    + M+ +G++ N  V+ ++I G+   G  + A   F        +   + YN+
Sbjct: 182 MEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNS 241

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++  YC+  ++E    L ++M  +G +  +  Y T+ +G  EI   E  L  F  ++   
Sbjct: 242 IVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 301

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++   +TY   +    K G + +A ++   +           Y+ ++DG  + G    A+
Sbjct: 302 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 361

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++++ +   GL P++VTYNI++H FC  G+MDKA  +  +++A  + P   T+ +++ G 
Sbjct: 362 KVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGY 421

Query: 241 IRNNETSKVVELLHRM 256
           ++     K +E+  R+
Sbjct: 422 VKGGHIQKALEVFDRI 437



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 122/260 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+    LL  M + G + N  +Y+T+++GF    + ++    F  +   G      TY  
Sbjct: 252 METVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGC 311

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++  + K  ++ ++L++  EM   G+ P  + Y  +  G         A K++++M  + 
Sbjct: 312 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 371

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  +   CK G + +A  +   ++  +    IE Y+ ++DG  K G ++ A 
Sbjct: 372 LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKAL 431

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +   GL P VV+YN ++ G     QM+ A  +  +M A GV PN  ++  L  G 
Sbjct: 432 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGY 491

Query: 241 IRNNETSKVVELLHRMDERN 260
            R  +  K   +  RM + N
Sbjct: 492 ARAGDVEKAFGMFQRMKKEN 511



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 117/250 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +L+ +    + P    Y++++DG+   G I +A E+F  +   G    VV+YN+
Sbjct: 392 MDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNS 451

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K + +E +  +  EML+ G+ P   +Y  L  G      VE A  +F  M+  +
Sbjct: 452 LLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN 511

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +   Y   +   CK+G +  A E+F+ +     +     Y  ++DG  + G+L  A 
Sbjct: 512 LAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKAR 571

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + + + G   + + Y   I      G  ++  +    M  K +  N  T+ TL+ G 
Sbjct: 572 DLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 631

Query: 241 IRNNETSKVV 250
           +   +  + +
Sbjct: 632 LAAADPDQAI 641



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 106/240 (44%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P    Y  L+D +   G+   AR  F +M  +    NV  Y +LI+ Y + +D+E ++ 
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
              EMLS+GI+     + ++  G       E A   F++ +  ++      YN+ +   C
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G +     L   +     +  +  Y+ +++G  +I   E     F  L   GL P   
Sbjct: 248 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAA 307

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  ++  F   G M KA D+  +M+  GV+PN + +  +M G  R  + +   ++   M
Sbjct: 308 TYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 367



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 83/201 (41%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  L++ Y +  D   +   +  M +  I+P V  Y +L H   E   +E A+   +EM 
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +    + + + I G    G    A   F   +      G   Y+ ++   C+ G +E
Sbjct: 194 SQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNME 253

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           T   L   +   G   N+  Y  +++GF      +K    F  ++A G++P   T+  ++
Sbjct: 254 TVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIV 313

Query: 238 LGCIRNNETSKVVELLHRMDE 258
               +    +K +++L  MD+
Sbjct: 314 KLFTKAGNMAKALDILEEMDK 334


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 131/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N V++ T
Sbjct: 187 LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L +EM    
Sbjct: 247 LIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 130/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G+++    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  V++ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCKNG + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 130/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GEI  A+ +F ++   G   +VV++NTL+NGY K  D+ E 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +   + ++ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK+G +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 116/203 (57%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL +G  ++  +    +L + MQ
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +          +++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C +G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKEN 341



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 119/240 (49%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  KL+ A ELF  +   GL+PN V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           ++  +I G C DG++D A +++  M ++ ++P+ +T+NTL+ G  +N +  +  +L++ M
Sbjct: 243 SFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM 302


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M   GV P+ + Y+ LID FC  G I++A+ LF  M   GC   VVTY  
Sbjct: 239 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 298

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y K K V ++ +++  M+  G RP  VTY  L  GL +   +  A +++ ++  + 
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 358

Query: 121 VAAETS----------------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
            +A++                 TY   +DGLCK   +  A EL   +    CE     Y 
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 418

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK GK+++A E+F  + + G +P+V TY  +I     DG++D A  +   M   
Sbjct: 419 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 478

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              PN VT+  ++ G  R  E+ K ++LL  M+E+ 
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 514



 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 16/271 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +L+  M+++G  P+   YS +I   C   ++++A  LF  M + G   +V TY  L
Sbjct: 205 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 264

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   +E++  L+ EM S G  PTVVTY  L H   +  QV  A  +F  M  +  
Sbjct: 265 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 324

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL----------RVLKCE------LGIEAYSC 165
                TY   +DGLCK G I +A E++  L              CE        +  Y  
Sbjct: 325 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 384

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DGLCK  K++ A EL  ++   G  PN + Y+ +I GFC  G++D A ++FL M   G
Sbjct: 385 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 444

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             P+  T+ +L+    ++      +++L +M
Sbjct: 445 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 123/251 (49%), Gaps = 16/251 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---------------- 46
           +A+ +   M+  G RPN   Y  L+DG C  G I +A E++  +                
Sbjct: 311 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 370

Query: 47  DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           D +    NVVTY  L++G CK   V+ +  L   MLS G  P  + Y+ L  G  +  ++
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 430

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           + A ++F +M          TY + ID + K+G +  A ++   +    C   +  Y+ +
Sbjct: 431 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 490

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           IDGLC+IG+ E A +L   +   G  PNVVTY  +I G    G++D + DLF  M  KG 
Sbjct: 491 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 550

Query: 227 APNCVTFNTLM 237
           +PN VT+  L+
Sbjct: 551 SPNYVTYRVLI 561



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 111/205 (54%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   Y  L+DG C   ++D A EL  +M  +GC  N + Y+ LI+G+CK   ++ +  +
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M   G  P+V TY +L   +F+  +++ A+K+  +M          TY   IDGLC+
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G   +A +L   +    C   +  Y+ LIDGL K GK++ + +LF  + R G  PN VT
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDME 222
           Y ++I+  C  G +DKA  L  +M+
Sbjct: 557 YRVLINHLCAAGLLDKARLLLGEMK 581



 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 3/255 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M+  G  PN  VY  LIDGFC  G+ID A+E+F+ M   G + +V TY +
Sbjct: 395 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 454

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K   ++ ++ + S+ML     P VVTY  +  GL  I + E ALKL   M+   
Sbjct: 455 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 514

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   IDGL K G I  + +LF  +    C      Y  LI+ LC  G L+ A 
Sbjct: 515 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 574

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + +      +  Y   I GF        +  +  +ME+ G  P    +  +++ C
Sbjct: 575 LLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYG-MLIDC 631

Query: 241 IRNNETSKVVELLHR 255
                  ++   LH+
Sbjct: 632 FSKAGRLEIAMELHK 646



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 124/297 (41%), Gaps = 43/297 (14%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA   L  M      PN   Y TL+ GF    ++   + +   M   GC  N   +N+L
Sbjct: 59  DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 118

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG---------------------- 99
           ++ YC  KD   +  L + M + G  P  V YN +F G                      
Sbjct: 119 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 100 --------------------LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
                               L  + + + A +L  EM       +TSTY+  I  LC   
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            + +A  LF+ ++++     +  Y+ LID  CK G +E A  LF+ +  VG  P VVTY 
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +IH +    Q+ +A+D+F  M   G  PN VT+  L+ G  +    SK  E+  ++
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 354



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 22/275 (8%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI------DRARELFVSMDINGCMHNVVT 57
           A +LL+ M   G  P   VY+  I   C   ++      D A +++  M    C+ N V 
Sbjct: 131 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 190

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
                   C     +++  L  EM+ KG  P   TY+ +   L    +VE A  LF EM+
Sbjct: 191 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 250

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  +  TY   ID  CK G I +A  LF  +R + C   +  Y+ LI    K  ++ 
Sbjct: 251 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 310

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM---------------- 221
            A ++F  +   G  PN VTY  ++ G C  G + KA +++  +                
Sbjct: 311 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 370

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   +APN VT+  L+ G  + ++     ELL  M
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 405



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++   M+      N    +      C  G+ D+A +L   M   G + +  TY+ 
Sbjct: 169 LDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 228

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   C    VE++  L+ EM   G+ P V TY  L     +   +E A  LF+EM+   
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   I    K   + +A ++F  +    C      Y  L+DGLCK G +  A+
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348

Query: 181 ELFQSL----------------PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           E++  L                 R  L PNVVTY  ++ G C   ++D AH+L   M + 
Sbjct: 349 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 408

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G  PN + ++ L+ G  +  +     E+  +M +
Sbjct: 409 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 41/290 (14%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LD++ +   + +  + + +I G       D A      M  N C+ NVVTY TL++G+ K
Sbjct: 30  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 89

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K +     + + M+++G  P    +N+L H         +A KL + M           
Sbjct: 90  KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 149

Query: 128 YNTFIDGLCKN----------------GYIVEAAELFRTLRV---LKCELGI-------- 160
           YN FI  +C                  G ++ A  +   + V    +C  G+        
Sbjct: 150 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 209

Query: 161 --------------EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           YS +I  LC   K+E A+ LFQ +  VG+ P+V TY I+I  FC
Sbjct: 210 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 269

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G +++A  LF +M + G +P  VT+  L+   ++  +  +  ++ HRM
Sbjct: 270 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 319



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 35/261 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++L  M++    PN   Y+ +IDG C  GE ++A +L   M+  GC  NVVTY  
Sbjct: 465 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 524

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA----------- 109
           LI+G  K   ++ SL+L+++M  KG  P  VTY  L + L     ++ A           
Sbjct: 525 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 584

Query: 110 ----------------------LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                                 L + +EM+          Y   ID   K G +  A EL
Sbjct: 585 WPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 644

Query: 148 FRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            + +  +   +  +   Y+ LI  LC   ++E A+ L+  + R G +P +  +  +I G 
Sbjct: 645 HKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 704

Query: 206 CNDGQMDKAHDLFLDMEAKGV 226
               + D+A  L   +  +GV
Sbjct: 705 VEVKKWDEALQLCYGICHEGV 725



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 7/143 (4%)

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKI 173
           M  S    +  T   F   LCK G   +A ++       + +  ++   C  +I GL + 
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIE-----REDFKLDTVLCTHMISGLMEA 55

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
              + A      +     +PNVVTY  ++ GF    Q+     +   M  +G  PN   F
Sbjct: 56  SYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLF 115

Query: 234 NTLMLGCIRNNETSKVVELLHRM 256
           N+L+       + +   +LL+RM
Sbjct: 116 NSLVHSYCNEKDYAYAYKLLNRM 138


>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 376

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L     + G+  YS L+ GLC   ++E A 
Sbjct: 195 CSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 XLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 124/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK K   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL L++++    
Sbjct: 205 LINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A  L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 118/229 (51%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M S+G R +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ S    ++ TY   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK   L+ A  +   + + G  PNV  YN +I+G     +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + A  +F +M     +P  +T+NTL+ G  +N    +   L+  + ++
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDK 228



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 128/259 (49%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+   +++  V P+A VY+ +++G+    +I    EL+  M   G   +V ++N 
Sbjct: 6   IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNI 64

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      V+E ++++  M   G     +TY  L HG  +   ++ +L + +  +   
Sbjct: 65  MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  I+GLCK   +  A  +   +    C+  +  Y+ LI+GL    K E A 
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAI 184

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +  +   P ++TYN +I+G C +    +A++L  ++  KG+ P  +T++ LM G 
Sbjct: 185 RVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGL 244

Query: 241 IRNNETSKVVELLHRMDER 259
             ++   + + L +++  +
Sbjct: 245 CLDHRVERALXLWNQVTSK 263


>gi|255660974|gb|ACU25656.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 372

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 74  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 133

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 134 MINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 193

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L     + G+  YS L+ GLC   ++E A 
Sbjct: 194 CSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERAL 253

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 254 XLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 313

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 314 YKDGDIRNALVIWARI 329



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 119/214 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 144 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 203

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK K   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL L++++    
Sbjct: 204 LINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKG 263

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 264 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 323

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            ++  + R GL P++++YNI + G C+  ++  A
Sbjct: 324 VIWARILRNGLEPDIISYNITLEGLCSCNRISDA 357



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 109 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 168

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 169 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKG 228

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A  L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 229 LDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 288

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 289 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGL 348

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 349 CSCNRISDAILFLH 362



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 117/227 (51%), Gaps = 1/227 (0%)

Query: 33  TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
           +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M S+G R +V +
Sbjct: 2   SGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SVSS 60

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           +N +  GLF+  +V+  + +++ M+ S    ++ TY   + G CKNGYI ++  +     
Sbjct: 61  FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 120

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                L   AYS +I+GLCK   L+ A  +   + + G  PNV  YN +I+G     + +
Sbjct: 121 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 180

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            A  +F +M     +P  +T+NTL+ G  +N    +   L+  + ++
Sbjct: 181 DAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDK 227



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 128/259 (49%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+   +++  V P+A VY+ +++G+    +I    EL+  M   G   +V ++N 
Sbjct: 5   IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNI 63

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      V+E ++++  M   G     +TY  L HG  +   ++ +L + +  +   
Sbjct: 64  MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 123

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  I+GLCK   +  A  +   +    C+  +  Y+ LI+GL    K E A 
Sbjct: 124 GVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAI 183

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +  +   P ++TYN +I+G C +    +A++L  ++  KG+ P  +T++ LM G 
Sbjct: 184 RVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGL 243

Query: 241 IRNNETSKVVELLHRMDER 259
             ++   + + L +++  +
Sbjct: 244 CLDHRVERALXLWNQVTSK 262


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M   GV P+ + Y+ LID FC  G I++A+ LF  M   GC   VVTY  
Sbjct: 473 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 532

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y K K V ++ +++  M+  G RP  VTY  L  GL +   +  A +++ ++  + 
Sbjct: 533 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 592

Query: 121 VAAETS----------------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
            +A++                 TY   +DGLCK   +  A EL   +    CE     Y 
Sbjct: 593 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 652

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK GK+++A E+F  + + G +P+V TY  +I     DG++D A  +   M   
Sbjct: 653 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 712

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              PN VT+  ++ G  R  E+ K ++LL  M+E+ 
Sbjct: 713 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 748



 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 16/271 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +L+  M+++G  P+   YS +I   C   ++++A  LF  M + G   +V TY  L
Sbjct: 439 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 498

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   +E++  L+ EM S G  PTVVTY  L H   +  QV  A  +F  M  +  
Sbjct: 499 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 558

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL----------RVLKCE------LGIEAYSC 165
                TY   +DGLCK G I +A E++  L              CE        +  Y  
Sbjct: 559 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 618

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DGLCK  K++ A EL  ++   G  PN + Y+ +I GFC  G++D A ++FL M   G
Sbjct: 619 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 678

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             P+  T+ +L+    ++      +++L +M
Sbjct: 679 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 709



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 16/224 (7%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---------------- 46
           +A+ +   M+  G RPN   Y  L+DG C  G I +A E++  +                
Sbjct: 545 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 604

Query: 47  DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           D +    NVVTY  L++G CK   V+ +  L   MLS G  P  + Y+ L  G  +  ++
Sbjct: 605 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 664

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           + A ++F +M          TY + ID + K+G +  A ++   +    C   +  Y+ +
Sbjct: 665 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 724

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           IDGLC+IG+ E A +L   +   G  PNVVTY  +I G     Q
Sbjct: 725 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQSWQ 768



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 124/297 (41%), Gaps = 43/297 (14%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA   L  M      PN   Y TL+ GF    ++   + +   M   GC  N   +N+L
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG---------------------- 99
           ++ YC  KD   +  L + M + G  P  V YN +F G                      
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYG 411

Query: 100 --------------------LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
                               L  + + + A +L  EM       +TSTY+  I  LC   
Sbjct: 412 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 471

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            + +A  LF+ ++++     +  Y+ LID  CK G +E A  LF+ +  VG  P VVTY 
Sbjct: 472 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 531

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +IH +    Q+ +A+D+F  M   G  PN VT+  L+ G  +    SK  E+  ++
Sbjct: 532 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 588



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 22/275 (8%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI------DRARELFVSMDINGCMHNVVT 57
           A +LL+ M   G  P   VY+  I   C   ++      D A +++  M    C+ N V 
Sbjct: 365 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 424

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
                   C     +++  L  EM+ KG  P   TY+ +   L    +VE A  LF EM+
Sbjct: 425 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 484

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  +  TY   ID  CK G I +A  LF  +R + C   +  Y+ LI    K  ++ 
Sbjct: 485 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 544

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM---------------- 221
            A ++F  +   G  PN VTY  ++ G C  G + KA +++  +                
Sbjct: 545 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 604

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   +APN VT+  L+ G  + ++     ELL  M
Sbjct: 605 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 639



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 16/243 (6%)

Query: 30  FCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPT 89
            C  G+ D+A +L   M   G + +  TY+ +I   C    VE++  L+ EM   G+ P 
Sbjct: 432 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 491

Query: 90  VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
           V TY  L     +   +E A  LF+EM+    +    TY   I    K   + +A ++F 
Sbjct: 492 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 551

Query: 150 TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL----------------PRVGLMP 193
            +    C      Y  L+DGLCK G +  A+E++  L                 R  L P
Sbjct: 552 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 611

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NVVTY  ++ G C   ++D AH+L   M + G  PN + ++ L+ G  +  +     E+ 
Sbjct: 612 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 671

Query: 254 HRM 256
            +M
Sbjct: 672 LQM 674



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 41/290 (14%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LD++ +   + +  + + +I G       D A      M  N C+ NVVTY TL++G+ K
Sbjct: 264 LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 323

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K +     + + M+++G  P    +N+L H         +A KL + M           
Sbjct: 324 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 383

Query: 128 YNTFIDGLCKN----------------GYIVEAAELFRTLRV---LKCELGI-------- 160
           YN FI  +C                  G ++ A  +   + V    +C  G+        
Sbjct: 384 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 443

Query: 161 --------------EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           YS +I  LC   K+E A+ LFQ +  VG+ P+V TY I+I  FC
Sbjct: 444 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 503

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G +++A  LF +M + G +P  VT+  L+   ++  +  +  ++ HRM
Sbjct: 504 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 553



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 74/135 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M+  G  PN  VY  LIDGFC  G+ID A+E+F+ M   G + +V TY +
Sbjct: 629 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 688

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K   ++ ++ + S+ML     P VVTY  +  GL  I + E ALKL   M+   
Sbjct: 689 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 748

Query: 121 VAAETSTYNTFIDGL 135
            +    TY   IDGL
Sbjct: 749 CSPNVVTYTALIDGL 763



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 7/200 (3%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+   C+     E+L     +   G RP+ VTYN L   L    QV+   ++  EM  
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSE 237

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKL 176
           S    +  T   F   LCK G   +A ++     + + +  ++   C  +I GL +    
Sbjct: 238 SGFCMDRFTVGCFAHALCKEGRWADALDM-----IEREDFKLDTVLCTHMISGLMEASYF 292

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A      +     +PNVVTY  ++ GF    Q+     +   M  +G  PN   FN+L
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352

Query: 237 MLGCIRNNETSKVVELLHRM 256
           +       + +   +LL+RM
Sbjct: 353 VHSYCNEKDYAYAYKLLNRM 372


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  156 bits (395), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 138/239 (57%), Gaps = 2/239 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L  +M++RG +P+   Y+ L+ G+CL  ++D AR LF  M   G + +V +YN LI
Sbjct: 301 EARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILI 360

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DV 121
            GYCK + V E++NL  +M  K + P ++TYN++  GL +   +  A KL DEM +    
Sbjct: 361 KGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQP 420

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC-ELGIEAYSCLIDGLCKIGKLETAW 180
             + +TYN  ++ LC+   + +A   F+ L   +     + +Y+ LI G CK  +L+ A 
Sbjct: 421 PPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAI 480

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF  +    L+P++VTYNI++    N  Q+DKA  L + +  +G++PN  T+N L+ G
Sbjct: 481 NLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILING 539



 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 144/255 (56%), Gaps = 2/255 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L ++MI+RG + +   Y+ L++G+CL  ++  AR+LF  M   G   + +TY  
Sbjct: 264 VDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTI 323

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC    V+E+ NL+  M+ +G+ P V +YN L  G  +  +V  A+ L ++M   +
Sbjct: 324 LMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKN 383

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-KCELGIEAYSCLIDGLCKIGKLETA 179
           +     TYN+ +DGLCK+G I++A +L   +    +    +  Y+ L++ LC+I  +E A
Sbjct: 384 LVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKA 443

Query: 180 WELFQSLP-RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              F+ L       PNV +YNI+I G C + ++D+A +LF  M  K + P+ VT+N L+ 
Sbjct: 444 IAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLD 503

Query: 239 GCIRNNETSKVVELL 253
                 +  K + LL
Sbjct: 504 ALFNGQQLDKAIALL 518



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 138/278 (49%), Gaps = 18/278 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLI----------------DGFCLTGEIDRARELFV 44
           ++EA  L   MI +G+ P+ F YS+LI                +GFCL  ++D ARELF 
Sbjct: 213 INEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFN 272

Query: 45  SMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
            M   G  H+++ YN L+NGYC    V E+  L+  M+ +G +P  +TY  L HG   I 
Sbjct: 273 VMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLID 332

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +V+ A  LF  M    +  +  +YN  I G CK   + EA  L   + +      I  Y+
Sbjct: 333 KVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYN 392

Query: 165 CLIDGLCKIGKLETAWELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-E 222
            ++DGLCK G +  AW+L   +       P+V TYNI++   C    ++KA   F  +  
Sbjct: 393 SVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIF 452

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +  APN  ++N L+ GC +N    + + L + M  +N
Sbjct: 453 ERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKN 490



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 135/280 (48%), Gaps = 23/280 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M+     P+   ++ ++           A +L+  M+  G +   VT+N 
Sbjct: 35  IDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNI 94

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +C    ++ + ++  ++L  G RP VVT+ TL  G     ++  AL ++DEM    
Sbjct: 95  LINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARR 154

Query: 121 VAAETSTYNTFIDGLCKN--GYIVEAAELFRTL---RVLKCELGIEAYSCLIDGLCKIGK 175
           +  +   Y T I+GLCK+  G    A +L + +   +++K  L +  Y+ ++ GLCK G 
Sbjct: 155 IRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIM--YNTVVHGLCKDGN 212

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ----------------MDKAHDLFL 219
           +  A  L   +   G+ P++ TY+ +I+G C  GQ                +D+A +LF 
Sbjct: 213 INEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFN 272

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            M  +G   + + +N LM G   NN+  +  +L H M ER
Sbjct: 273 VMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVER 312



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 3/227 (1%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C    ID A  LF  M     + ++V +  ++    K +    +++LY+ M  KG+ P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           VT+N L +    + Q++ A  +  ++          T+ T + G C N  +++A  ++  
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 151 LRVLKCELGIEAYSCLIDGLC--KIGKLETAWELFQSLPRVGLM-PNVVTYNIMIHGFCN 207
           +   +       Y  LI+GLC  KIGK   A +L Q +    L+ PN++ YN ++HG C 
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           DG +++A  L   M  +G+ P+  T+++L+ G  R  +  +V  LL+
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLN 256



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 39/209 (18%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--------DING---- 50
           EA  LL+ M  + + PN   Y++++DG C +G I  A +L   M        D+      
Sbjct: 371 EAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNIL 430

Query: 51  --------CMH-----------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                   C+                  NV +YN LI+G CK + ++E++NL++ M  K 
Sbjct: 431 LESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKN 490

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + P +VTYN L   LF   Q++ A+ L  ++    ++    TYN  I+GL K G    A 
Sbjct: 491 LVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQ 550

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++   L +      ++ Y  +I+ LCK G
Sbjct: 551 KISLYLSIRGYHPDVKTY--IINELCKGG 577



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 3/123 (2%)

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK   I +A  LF  +  +     I  ++ ++  + K+    TA +L+  +   G++P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VT+NI+I+ FC+ GQMD A  +   +   G  PN VTF TLM G   N+   K+++ L+ 
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVND---KMLDALYI 146

Query: 256 MDE 258
            DE
Sbjct: 147 YDE 149


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 132/256 (51%), Gaps = 5/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+ + M  R    N   Y+ LI G C  G ID A  LFV M  + C  NV TY  
Sbjct: 243 VDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTA 298

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+ K+V +++ L  EML + + P ++TYN+L  G      ++ A +L   M+   
Sbjct: 299 LIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERG 357

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY  FID LCK+  + EA  LF +L        +  YS LIDG CK+GK++ A 
Sbjct: 358 LVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAG 417

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +      PN  T+N +IHG C+ G + +A  LF  M   G+ P   TFN L+   
Sbjct: 418 CLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRM 477

Query: 241 IRNNETSKVVELLHRM 256
           ++  +     + L +M
Sbjct: 478 LKQGDFDDAHKCLQKM 493



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M      PN + Y+ LI G C    + +A  L   M     + +++TYN+
Sbjct: 274 IDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNS 332

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+   ++ +  L S M  +G+ P   TY      L + ++VE A +LFD +    
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+A    Y+  IDG CK G + EA  LF  +    C      ++ LI GLC  G L+ A 
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF  + ++GL P V T+NI+I      G  D AH     M + G  P   T+N  +
Sbjct: 453 SLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFI 509



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 122/235 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LLD M++R + P+   Y++LI G C  G +D A  L   M   G + +  TY   I
Sbjct: 310 KAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFI 369

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK+  VEE+  L+  +  +G+   V+ Y+ L  G  ++ +V+ A  LF++M   + +
Sbjct: 370 DFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCS 429

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  I GLC  G + EA  LF  +  +  +  +  ++ LI  + K G  + A + 
Sbjct: 430 PNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKC 489

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            Q +   G  P   TYN  I  +C+ G++ +A D+ + M+ +GV P+  T+ +L+
Sbjct: 490 LQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLI 544



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 40/291 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE ++L   M++  V  + + ++ +I+ +C  G +  A++    M   G   +  T  +
Sbjct: 173 VDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTS 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I GYC++KDV+ +  ++ EM ++      V+YN L HGL E  +++ A+ LF  M+   
Sbjct: 233 FILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDC 288

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   I GLC+   + +A  L   +        +  Y+ LI G C+ G L++A+
Sbjct: 289 CYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAY 347

Query: 181 ELFQSLPRVGLMP-----------------------------------NVVTYNIMIHGF 205
            L   +   GL+P                                   NV+ Y+++I G+
Sbjct: 348 RLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGY 407

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C  G++D+A  LF  M +K  +PN  TFN L+ G        + + L  +M
Sbjct: 408 CKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQM 458



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 119/285 (41%), Gaps = 29/285 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + M+ +   PNA+ ++ LI G C  G +  A  LF  M   G    V T+N 
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI    K  D +++     +M+S G +P   TYN          +V+ A  +  +M+   
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC------------------------ 156
           V  +  TY + I    K G    A ++ +++    C                        
Sbjct: 533 VPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKS 592

Query: 157 -ELGIEAYSCLID----GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
            E G+E+ S   D     + K+ + +   ELF+ + + G  P+   Y  +I G C    +
Sbjct: 593 GETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENL 652

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             A  L   M+ +G++P+ + FN ++  C +  +  +   ++  M
Sbjct: 653 GIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDM 697



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 111/277 (40%), Gaps = 29/277 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L D M++ G++P  + ++ LI      G+ D A +    M  +G      TYN 
Sbjct: 448 LKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNA 507

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I  YC    V+E+ ++  +M  +G+ P   TY +L     ++     A  +   M  +D
Sbjct: 508 FIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDAD 567

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAA-----------------------------ELFRTL 151
                 T+ + I  L    Y+VE +                             ELF  +
Sbjct: 568 CEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEM 627

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
               C    + Y  LI G+CK+  L  A +L   + + G+ P+ + +N +I   C   + 
Sbjct: 628 EKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKY 687

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            +A ++  DM   G +P      TL+ G     ET +
Sbjct: 688 GEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETER 724



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           E D   ELF  M+ +GC  +   Y  LI+G CK +++  +L L  +M  +GI P+ + +N
Sbjct: 616 EFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFN 675

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            +     ++ +   A  + ++M  S  + +     T I GL + G       +F+ LR  
Sbjct: 676 AVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGC 735

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM---IHG 204
                  A+  LIDG+ K G +E   +LF+ + + G   +  TY+I+   +HG
Sbjct: 736 GYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHG 788



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 72/165 (43%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
            L + M + G  P++  Y  LI G C    +  A +L   M   G   + + +N +I+  
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK +   E+ N+  +M+  G  P +    TL  GL+E  + E    +F +++      + 
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
             +   IDG+ K G + E ++LF  +    C      YS L   L
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/104 (22%), Positives = 51/104 (49%)

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           +L ++ Y+ L+  L + G ++   +L+  +    +  ++ T+N+MI+ +C  G + +A  
Sbjct: 154 KLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQ 213

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
               M   G++P+  T  + +LG  R+ +      +   M  RN
Sbjct: 214 FMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN 257


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 137/258 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D + +    M   G++ + F Y+ +ID  C  G+++ AR LF  M   G   ++VTYN+L
Sbjct: 38  DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 97

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+ K   ++E + ++ +M      P V+TYN L +   +  ++  A +   EM+ + +
Sbjct: 98  IDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 157

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY+TFID  CK G + EA + F  +R +        Y+ LID  CK G L  A +
Sbjct: 158 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 217

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + + + G+  NVVTY  ++ G C +G+M +A ++F  M   GVAPN  T+  L+ G I
Sbjct: 218 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 277

Query: 242 RNNETSKVVELLHRMDER 259
           +  E     ++L  M E+
Sbjct: 278 KAKEMEYAKDILKEMKEK 295



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 130/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M + G  P+   Y++LIDG    G +D    +F  M    C  +V+TYN 
Sbjct: 72  LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 131

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +CK + + ++     EM + G++P VVTY+T      +   ++ A+K F +M+   
Sbjct: 132 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 191

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + ID  CK G + EA +L   +     +L +  Y+ L+DGLC+ G+++ A 
Sbjct: 192 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 251

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+F+++   G+ PN  TY  ++HGF    +M+ A D+  +M+ K + P+ + + T++ G
Sbjct: 252 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 310



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 23/280 (8%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L++ ++Q G++ N   Y+ L+DG C  G +  A E+F +M   G   N  TY  L+
Sbjct: 214 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 273

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K K++E + ++  EM  K I+P ++ Y T+  GL    ++E A  L  E++ S + 
Sbjct: 274 HGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGIN 333

Query: 123 AETSTYNTF-----------------------IDGLCKNGYIVEAAELFRTLRVLKCELG 159
                Y T                        +DGLCKN     A +LF  +        
Sbjct: 334 TNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPD 393

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
             AY+ LIDG  K G L+ A  L   +  +G+  ++  Y  +I G  + GQ+ KA +L  
Sbjct: 394 KIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLD 453

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +M  KGV P+ V +  L+       +  + +EL + M +R
Sbjct: 454 EMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKR 493



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 126/281 (44%), Gaps = 23/281 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A   L  M   G++PN   YST ID FC  G +  A + FV M       N  TY +
Sbjct: 142 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTS 201

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  ++ E+L L  E+L  GI+  VVTY  L  GL E  +++ A ++F  M ++ 
Sbjct: 202 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 261

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA    TY   + G  K   +  A ++ + ++    +  +  Y  ++ GLC   +LE A 
Sbjct: 262 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 321

Query: 181 ELFQSLPRVGLMPNVVTYNI-----------------------MIHGFCNDGQMDKAHDL 217
            L   +   G+  N V Y                         ++ G C +   + A  L
Sbjct: 322 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKL 381

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           F +M  KG+ P+ + +  L+ G +++    + + L  RM E
Sbjct: 382 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIE 422



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 23/249 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  +   M+  GV PN   Y+ L+ GF    E++ A+++   M       +++ Y T
Sbjct: 247 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT 306

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL---------- 110
           ++ G C    +EE+  L  E+   GI    V Y TL    F+  Q   AL          
Sbjct: 307 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLV 366

Query: 111 -------------KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
                        KLFDEM    +  +   Y   IDG  K+G + EA  L   +  +  E
Sbjct: 367 DGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGME 426

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           L + AY+ LI GL   G+++ A  L   +   G++P+ V Y  +I  +   G++D+A +L
Sbjct: 427 LDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 486

Query: 218 FLDMEAKGV 226
             +M  +G+
Sbjct: 487 QNEMAKRGM 495



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 29/226 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  +L  M ++ ++P+  +Y T++ G C    ++ A+ L   +  +G   N V Y T
Sbjct: 282 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 341

Query: 61  LINGYCKTKDVEESL-----------------------NLYSEMLSKGIRPTVVTYNTLF 97
           L++ Y K+    E+L                        L+ EML KG+ P  + Y  L 
Sbjct: 342 LMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 401

Query: 98  HGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVL 154
            G  +   ++ AL L D M    +  +   Y   I GL  +G + +A  L   +    VL
Sbjct: 402 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 461

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
             E+    Y CLI     +GK++ A EL   + + G++  +  + +
Sbjct: 462 PDEV---VYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 504


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 135/252 (53%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L D M  +G+ P+A  Y  LI G C  G+++ A+ L   M   G   N V +NTLI+GYC
Sbjct: 352 LFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYC 411

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           ++  V+E+L L   M  KG+   V  YN++  GL ++++ + A  L   M    V+  T 
Sbjct: 412 ESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 471

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           ++ T ID  CK G  VEA  +FR +        I  Y+ LIDG  K G ++ A +L   L
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              GL+P+V T   +IHG C DG++D A  LF +M  +G+ PN VT+  ++ G  ++  +
Sbjct: 532 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 591

Query: 247 SKVVELLHRMDE 258
            +  +L   M E
Sbjct: 592 EEAFKLYDEMKE 603



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 136/255 (53%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           + +L LM + GV  N   Y+ LI GF   G+I+ A+ LF  M   G   +V  Y ++I+ 
Sbjct: 280 AEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISC 339

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
            C++ +V+ +L L+ EM  KG+ P+  TY  L HG+ +  Q+E A  L +EMQ   +   
Sbjct: 340 NCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLN 399

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
              +NT IDG C++G + EA  L   +     E  + AY+ +  GLCK+ + + A  L  
Sbjct: 400 PVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLF 459

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           S+   G+ PN +++  +I  +C +G   +A  +F +ME KG  PN +T+N L+ G  +  
Sbjct: 460 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 519

Query: 245 ETSKVVELLHRMDER 259
              +  +L   ++ R
Sbjct: 520 NMKEAHKLKDELENR 534



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 135/248 (54%), Gaps = 5/248 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L++ M  +G+  N  +++TLIDG+C +G +D A  L V M+  G   +V  YN+
Sbjct: 381 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 440

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           + +G CK    +E+  L   M+ +G+ P  +++ TL     +      A ++F EM+   
Sbjct: 441 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 500

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
                 TYN  IDG  K G + EA +L   L      L  + Y+C  LI G C  GK++ 
Sbjct: 501 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELE--NRGLIPDVYTCTSLIHGECIDGKVDM 558

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +LF  +P+ GL+PNVVTY  MI G   DG+ ++A  L+ +M+  G+ P+   +++L +
Sbjct: 559 ALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSL-V 617

Query: 239 GCIRNNET 246
           G + + E+
Sbjct: 618 GSLHSAES 625



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RL + M ++G+  + +VY+++I   C +G + RA  LF  M   G + +  TY  
Sbjct: 311 IEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGA 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +E +  L +EM  KGI    V +NTL  G  E   V+ AL+L   M+   
Sbjct: 371 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + ++   YN+   GLCK     EA  L  ++          +++ LID  CK G    A 
Sbjct: 431 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAK 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G +PN++TYN++I G+   G M +AH L  ++E +G+ P+  T  +L+ G 
Sbjct: 491 RVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGE 550

Query: 241 IRNNETSKVVELLHRMDER 259
             + +    ++L   M +R
Sbjct: 551 CIDGKVDMALKLFDEMPQR 569



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 125/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   R    M+   V    +  + ++DG C  G+++  R+L   +   G   NVVTYN 
Sbjct: 206 VDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNA 265

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I GY K  D+     + + M  +G+   VVTY  L HG   I ++E A +LF+EM+   
Sbjct: 266 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 325

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+   Y + I   C++G +  A  LF  +           Y  LI G+CK G++E A 
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 385

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+  N V +N +I G+C  G +D+A  L + ME KG+  +   +N++  G 
Sbjct: 386 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445

Query: 241 IRNNETSKVVELLHRMDER 259
            + N   +   LL  M ER
Sbjct: 446 CKLNRKDEAKGLLFSMVER 464



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           G++D     F  M        V +   +++G CK  DVE    L  E+ +KG++  VVTY
Sbjct: 204 GQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTY 263

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           N    G F+   +    ++   M+   VA    TY   I G    G I EA  LF  +R 
Sbjct: 264 NAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMRE 323

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
              E  +  Y+ +I   C+ G ++ A  LF  +   GL+P+  TY  +IHG C  GQM+ 
Sbjct: 324 KGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEA 383

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLG 239
           A  L  +M+ KG+  N V FNTL+ G
Sbjct: 384 AQMLVNEMQGKGIDLNPVIFNTLIDG 409



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 75/167 (44%)

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           ++ LF    +      AL+ F+ M+      +  +   ++  L + G +      FR + 
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
            L  E+ + + + ++DGLCK G +E   +L   +   G+  NVVTYN  I G+     + 
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              ++   ME +GVA N VT+  L+ G     +  +   L   M E+
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 324


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 133/246 (54%), Gaps = 3/246 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI +  +P+AF ++ L+ G C + ++++AR+L   M   GC+ +   YN LI+GY K KD
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             ++    +EM+     PTVVTY  +  GL +  + + A+KL DEM+    +    TYN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++GLC+   + EA ++   + V      +  Y+  I GLCK  +++ A +    +P   
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+VV+Y  +I+G C  G +D A  +   M  +G  P+ VT+++L+ G  +  E  + +
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 251 ELLHRM 256
            LL  M
Sbjct: 238 GLLDSM 243



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +LL  M + G  P+  +Y+ LI G+    +  +A +    M  N C+  VVTY  
Sbjct: 26  LEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTN 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK    ++++ L  EM  KG  P + TYN +  GL E  +++ A K+ +EM    
Sbjct: 86  IVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN+FI GLCK   + EA +    + V      + +Y+ +I+GLCK G L++A 
Sbjct: 146 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP---DVVSYTTVINGLCKSGDLDSAS 202

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   G  P+VVTY+ +I GFC  G++++A  L   M   G  PN V +N+L+   
Sbjct: 203 RMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 262

Query: 241 IRNNETSKVVELLHRMDERN 260
            R     K  ++L  M+ R 
Sbjct: 263 HRLGHIGKAEDMLVEMERRG 282



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 4/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA + L  M    V P+   Y+T+I+G C +G++D A  +   M   GC  +VVTY++
Sbjct: 166 VDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSS 222

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  +VE ++ L   ML  G RP +V YN+L   L  +  +  A  +  EM+   
Sbjct: 223 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 282

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YN  IDGLCK   + +A  +F  +    C     +YS L++ LCK  +L+ A 
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD-MEAKGVAPNCVTFNTLMLG 239
            L +       + +++ Y +++ G C  G+ D+A  LF   ++ K   P+   +N ++  
Sbjct: 343 TLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 402

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +  +  K +++  +M ERN
Sbjct: 403 HCKRRQIDKALQIHKQMLERN 423



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 136/327 (41%), Gaps = 70/327 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D ASR+LD M  RG  P+   YS+LIDGFC  GE++RA  L  SM   GC  N+V YN+
Sbjct: 198 LDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 257

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+    +   + ++ ++  EM  +G  P VV+YN    GL +  +V+ A  +FD M    
Sbjct: 258 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 317

Query: 121 VAAETSTYNTFI-----------------------------------DGLCKNGYIVEAA 145
                S+Y+  +                                   DGLCK G   EA 
Sbjct: 318 CTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEAC 377

Query: 146 ELF-RTLRVLKCELGIEAYSCLID----------------------------------GL 170
            LF + L    CE  +  Y+ ++D                                  GL
Sbjct: 378 ALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGL 437

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C   +L  A  +  ++   G +P+ VTY  ++   C  G+   A +LF +    G  P+ 
Sbjct: 438 CVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDV 497

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMD 257
           VT++ L+ G +  N   +   L  ++D
Sbjct: 498 VTYSALITGLVHENMAEEAYLLFTKLD 524



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 9/247 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYN 59
           +D+A  L++   ++    +  +Y+ L+DG C  G  D A  LF   +D   C  +V  YN
Sbjct: 338 LDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 397

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +++ +CK + ++++L ++ +ML +     VVT+N L HGL    ++  A  +   M   
Sbjct: 398 VMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDE 456

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TY T +D +CK G    A ELF       C   +  YS LI GL      E A
Sbjct: 457 GFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA 516

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + LF  L       +V  +N MI G+  +G  D    LF+++    V PN  TF   + G
Sbjct: 517 YLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISG 569

Query: 240 CIRNNET 246
            +   E+
Sbjct: 570 KLVKAES 576



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 9/223 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M++R    N   ++ L+ G C+   +  A  + ++M   G + + VTY T
Sbjct: 409 IDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 467

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK      +L L+ E +  G  P VVTY+ L  GL   +  E A  LF ++   D
Sbjct: 468 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL---D 524

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG-LCKIGKLETA 179
           VA     +N  I G  +NG      +LF  L     E     +   I G L K   L  A
Sbjct: 525 VA----LWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKA 580

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
             LF    + G  P++   N +I  F   G +++A  +F  M+
Sbjct: 581 RGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 62/134 (46%)

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+   + GLC++  + +A +L   ++ + C      Y+ LI G  K      A++    +
Sbjct: 12  TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            +   +P VVTY  ++ G C  G+   A  L  +M  KG +PN  T+N ++ G     + 
Sbjct: 72  VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 131

Query: 247 SKVVELLHRMDERN 260
            +  ++L  M  R 
Sbjct: 132 DEAKKMLEEMAVRG 145



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 48/105 (45%)

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C+     ++ L+ GLC+  +LE A +L   +  +G +P+   YN +I G+       +A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
               +M      P  VT+  ++ G  +   T   V+LL  M ++ 
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG 110


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 134/242 (55%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G RPNAF Y+ L+DG C    +D AR +           +VVTYNTL+    +   V+E+
Sbjct: 77  GCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEA 136

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L  +++M  +G  PT+V++N +  GL    ++  AL++F+EM   D      TY+  IDG
Sbjct: 137 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 196

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + EA +L   +    C   + AY+ L+ G    G+L++A  L + +   G +P+
Sbjct: 197 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 256

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTY ++I   C  G++D AH++F ++ A   +PN VT++ L+ G  R +   +  +++ 
Sbjct: 257 VVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 316

Query: 255 RM 256
            M
Sbjct: 317 EM 318



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 2/244 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELF-VSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           G++ N    S ++ G C  G + +A E F  S+++     +VV+Y TLING CK   V+ 
Sbjct: 5   GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64

Query: 74  SLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           + +L+ +M++  G RP   TYN L  GL +  +++ A  +  E +  D A +  TYNT +
Sbjct: 65  AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
             L + G + EA   F  +        + +++ +I GLC+  +L  A E+F  +      
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           PN+VTY+++I G C   Q+D+A  L   M ++G  P+ V +  L+LG          + L
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 244

Query: 253 LHRM 256
           L RM
Sbjct: 245 LRRM 248



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 3/236 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA      M + G  P    ++ +I G C    +  A E+F  M       N+VTY+ 
Sbjct: 133 VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSV 192

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+  ++E+  L   M+S+G RP +V Y  L  G     +++ AL L   M    
Sbjct: 193 VIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 252

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   ID LCK G + +A E+FR L   KC   +  YS LI G C+  +++   
Sbjct: 253 CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGG 312

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           ++ + +      PNVVTYN MI G     + ++A+ +F +M   G  P+  T+  L
Sbjct: 313 KVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 2/213 (0%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIH 104
           MD+ G   N  T + ++ G C+   V ++L  +   L     +P VV+Y TL +GL ++ 
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 105 QVEHALKLFDEMQHSDVAAETS-TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           +V+ A  LF +M  +      + TYN  +DGLCK   +  A  +    R       +  Y
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + L+  L ++G+++ A   F  +   G +P +V++N +I G C   ++  A ++F +M  
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   PN VT++ ++ G  ++++  +  +LL RM
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRM 213



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 6/173 (3%)

Query: 92  TYNTLFHGLFEIHQVEHALKLFD---EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T + +  GL    +V  AL+ FD   E+ H+    +  +Y T I+GLCK G +  A +LF
Sbjct: 12  TTSIILQGLCRCGRVAQALEHFDASLELAHAQ--PDVVSYTTLINGLCKLGRVDAAFDLF 69

Query: 149 RTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           R +     C      Y+ L+DGLCK  +L+ A  +     +    P+VVTYN ++     
Sbjct: 70  RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQ 129

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G++D+A   F  M  +G  P  V+FN ++ G  R    +  +E+ + M +R+
Sbjct: 130 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 182



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   ++     PN   YS LI G+C    +D   ++   M    C  NVVTYNT
Sbjct: 273 VDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNT 329

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           +I G       EE+  ++ EM   G  P   TY  L   L  I    H L
Sbjct: 330 MIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDHPPHVL 379


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 135/252 (53%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L D M  +G+ P+A  Y  LI G C  G+++ A+ L   M   G   N V +NTLI+GYC
Sbjct: 356 LFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYC 415

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           ++  V+E+L L   M  KG+   V  YN++  GL ++++ + A  L   M    V+  T 
Sbjct: 416 ESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 475

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           ++ T ID  CK G  VEA  +FR +        I  Y+ LIDG  K G ++ A +L   L
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              GL+P+V T   +IHG C DG++D A  LF +M  +G+ PN VT+  ++ G  ++  +
Sbjct: 536 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 595

Query: 247 SKVVELLHRMDE 258
            +  +L   M E
Sbjct: 596 EEAFKLYDEMKE 607



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 136/255 (53%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           + +L LM + GV  N   Y+ LI GF   G+I+ A+ LF  M   G   +V  Y ++I+ 
Sbjct: 284 AEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISC 343

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
            C++ +V+ +L L+ EM  KG+ P+  TY  L HG+ +  Q+E A  L +EMQ   +   
Sbjct: 344 NCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLN 403

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
              +NT IDG C++G + EA  L   +     E  + AY+ +  GLCK+ + + A  L  
Sbjct: 404 PVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLF 463

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           S+   G+ PN +++  +I  +C +G   +A  +F +ME KG  PN +T+N L+ G  +  
Sbjct: 464 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 523

Query: 245 ETSKVVELLHRMDER 259
              +  +L   ++ R
Sbjct: 524 NMKEAHKLKDELENR 538



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 135/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RL + M ++G+  + +VY+++I   C +G + RA  LF  M   G + +  TY  
Sbjct: 315 IEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGA 374

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   +E +  L +EM  KGI    V +NTL  G  E   V+ AL+L   M+   
Sbjct: 375 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + ++   YN+   GLCK     EA  L  ++          +++ LID  CK G    A 
Sbjct: 435 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAK 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G +PN++TYN++I G+   G M +AH L  ++E +G+ P+  T  +L+ G 
Sbjct: 495 RVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGE 554

Query: 241 IRNNETSKVVELLHRMDER 259
             + +    ++L   M +R
Sbjct: 555 CIDGKVDMALKLFDEMPQR 573



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 130/239 (54%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L++ M  +G+  N  +++TLIDG+C +G +D A  L V M+  G   +V  YN+
Sbjct: 385 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 444

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           + +G CK    +E+  L   M+ +G+ P  +++ TL     +      A ++F EM+   
Sbjct: 445 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 504

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
                 TYN  IDG  K G + EA +L   L      L  + Y+C  LI G C  GK++ 
Sbjct: 505 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELE--NRGLIPDVYTCTSLIHGECIDGKVDM 562

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A +LF  +P+ GL+PNVVTY  MI G   DG+ ++A  L+ +M+  G+ P+   +++L+
Sbjct: 563 ALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 125/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   R    M+   V    +  + ++DG C  G+++  R+L   +   G   NVVTYN 
Sbjct: 210 VDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNA 269

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I GY K  D+     + + M  +G+   VVTY  L HG   I ++E A +LF+EM+   
Sbjct: 270 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 329

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+   Y + I   C++G +  A  LF  +           Y  LI G+CK G++E A 
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 389

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+  N V +N +I G+C  G +D+A  L + ME KG+  +   +N++  G 
Sbjct: 390 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 449

Query: 241 IRNNETSKVVELLHRMDER 259
            + N   +   LL  M ER
Sbjct: 450 CKLNRKDEAKGLLFSMVER 468



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           G++D     F  M        V +   +++G CK  DVE    L  E+ +KG++  VVTY
Sbjct: 208 GQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTY 267

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           N    G F+   +    ++   M+   VA    TY   I G    G I EA  LF  +R 
Sbjct: 268 NAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMRE 327

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
              E  +  Y+ +I   C+ G ++ A  LF  +   GL+P+  TY  +IHG C  GQM+ 
Sbjct: 328 KGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEA 387

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLG 239
           A  L  +M+ KG+  N V FNTL+ G
Sbjct: 388 AQMLVNEMQGKGIDLNPVIFNTLIDG 413



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 93/169 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  LL  M++RGV PN   ++TLID +C  G    A+ +F  M+  G + N++TYN L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K  +++E+  L  E+ ++G+ P V T  +L HG     +V+ ALKLFDEM    +
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 575

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
                TY   I GL K+G   EA +L+  ++          YS L+  L
Sbjct: 576 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 5/123 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA +L D +  RG+ P+ +  ++LI G C+ G++D A +LF  M   G + NVVTY  
Sbjct: 525 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 584

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K    EE+  LY EM   G+ P    Y++L   L   H  + ++ +  ++Q S 
Sbjct: 585 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL---HSADESISM--QIQGSQ 639

Query: 121 VAA 123
           V A
Sbjct: 640 VKA 642



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 75/167 (44%)

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           ++ LF    +      AL+ F+ M+      +  +   ++  L + G +      FR + 
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
            L  E+ + + + ++DGLCK G +E   +L   +   G+  NVVTYN  I G+     + 
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              ++   ME +GVA N VT+  L+ G     +  +   L   M E+
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 328


>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 375

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ +L + + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCK     EA  L + L     + G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKYAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 133/254 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKYAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A+++LD  +  GV PN   Y  LI+GFC  G+++ A  L   M   G   N + +NT
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYC+   V+++L + + M   G+   + TYNTL  GL  +++++ A  L   M    
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY T I   CK+G +VEA  LFR +        +  Y+ +IDG  K G +  A 
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAE 477

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + + + G +P+V TY  ++HG C +G++D A  LF +M+ +G  PN V +  L+ G 
Sbjct: 478 RFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGL 537

Query: 241 IRNNETSKVVELLHRM 256
            +   +    +L   M
Sbjct: 538 AKEGRSEAAFQLYDDM 553



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 125/254 (49%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L++M   G+      Y+ L+D      +I +   LF  M  N  + +V  Y  +IN YC
Sbjct: 234 ILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYC 293

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  ++  +  +  E +  G+ P   TY  L +G  +I Q+E A  L  +MQ   V     
Sbjct: 294 RAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQI 353

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            +NT IDG C+ G + +A ++   +  +  EL I  Y+ L  GLC++ +L+ A  L   +
Sbjct: 354 IFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM 413

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +G++PN VTY  +I   C DG M +A  LF +M  KG  P+ VT+N ++ G  +    
Sbjct: 414 IEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSI 473

Query: 247 SKVVELLHRMDERN 260
            +       M+++ 
Sbjct: 474 REAERFRKEMEKKG 487



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 114/240 (47%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +    S ++DG C +G +D AR L   M  +G   N + YN+L++ Y + KD      + 
Sbjct: 176 SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 235

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M ++GI  TV TY  L   L     +     LF+EM+ ++V  +   Y   I+  C+ 
Sbjct: 236 EIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRA 295

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G +  AA++         E     Y  LI+G CKIG++E A  L   +   G+  N + +
Sbjct: 296 GNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 355

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N MI G+C  G +D A  +   ME  GV  +  T+NTL  G  R N   +   LLH M E
Sbjct: 356 NTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 415



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M    V  + ++Y+ +I+ +C  G + RA ++      NG   N  TY  LING+C
Sbjct: 269 LFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFC 328

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   +E +  L ++M  +G+    + +NT+  G      V+ ALK+   M+   V  +  
Sbjct: 329 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWEL 182
           TYNT   GLC+   + EA    +TL  +  E+G+      Y+ LI   CK G +  A  L
Sbjct: 389 TYNTLACGLCRVNRLDEA----KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRL 444

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   G  P+VVTYN+MI G+   G + +A     +ME KG  P+  T+ +L+ G   
Sbjct: 445 FREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCV 504

Query: 243 NNETSKVVELLHRMDERN 260
           N +    ++L   M +R 
Sbjct: 505 NGKVDVALKLFEEMKQRG 522



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 111/212 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M + GV  + + Y+TL  G C    +D A+ L   M   G + N VTY T
Sbjct: 368 VDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTT 427

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK  D+ E+  L+ EM  KG  P+VVTYN +  G  +   +  A +   EM+   
Sbjct: 428 LISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKG 487

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY + + G C NG +  A +LF  ++    E  + AY+ LI GL K G+ E A+
Sbjct: 488 FVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAF 547

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           +L+  + + GL+P+   Y+ ++     D + D
Sbjct: 548 QLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 125/260 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RLLD M + GV  NA  Y++L+D +    +  R +E+   M+  G    V TY  
Sbjct: 193 VDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTI 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++     +D+ +   L++EM +  +   V  Y  + +       +  A K+ DE   + 
Sbjct: 253 LVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   I+G CK G +  A  L   ++     L    ++ +IDG C+ G ++ A 
Sbjct: 313 VEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDAL 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++  ++ ++G+  ++ TYN +  G C   ++D+A  L   M   GV PN VT+ TL+   
Sbjct: 373 KIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIH 432

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++ +  +   L   M E+ 
Sbjct: 433 CKDGDMVEARRLFREMAEKG 452



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 139 GYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           G + +AA L  R L      +   A S ++DGLCK G+++ A  L   +PR G+  N + 
Sbjct: 155 GRLADAAGLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALC 214

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN ++  +       +  ++   ME +G+     T+  L+       + SKV  L + M 
Sbjct: 215 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 274

Query: 258 ERN 260
             N
Sbjct: 275 ANN 277


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 141/260 (54%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  ++   M++  V PN + Y+ +++G+C  G ++ A +    +   G   +  TY +
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GYC+ KD++ +  +++EM  KG R   V Y  L HGL    +++ A+ LF +M+  +
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   I  LC +    EA  L + +     +  I  Y+ LID LC   K E A 
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GLMPNV+TYN +I+G+C  G ++ A D+   ME++ ++PN  T+N L+ G 
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++N   K + +L++M ER 
Sbjct: 439 CKSN-VHKAMGVLNKMLERK 457



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 133/254 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +L+ M++R V P+   Y++LIDG C +G  D A  L   M+  G + +  TY ++I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK+K VEE+ +L+  +  KG+ P VV Y  L  G  +  +V+ A  + ++M   +  
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + T+N  I GLC +G + EA  L   +  +  +  +   + LI  L K G  + A+  
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           FQ +   G  P+  TY   I  +C +G++  A D+   M   GV+P+  T+++L+ G   
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684

Query: 243 NNETSKVVELLHRM 256
             +T+   ++L RM
Sbjct: 685 LGQTNFAFDVLKRM 698



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 133/294 (45%), Gaps = 34/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ + M  +G R N   Y+ LI G C+   ID A +LFV M  + C   V TY  
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   C ++   E+LNL  EM   GI+P + TY  L   L    + E A +L  +M    
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK---------------CELGIE---- 161
           +     TYN  I+G CK G I +A ++   +   K               C+  +     
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG 448

Query: 162 ---------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           Y+ LIDG C+ G  ++A+ L   +   GL+P+  TY  MI   C
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              ++++A DLF  +E KGV PN V +  L+ G  +  +  +   +L +M  +N
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 1/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +++LM  R + PN   Y+ LI G+C    + +A  +   M     + +VVTYN+
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNS 467

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C++ + + +  L S M  +G+ P   TY ++   L +  +VE A  LFD ++   
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      Y   IDG CK G + EA  +   +    C      ++ LI GLC  GKL+ A 
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + + ++GL P V T  I+IH    DG  D A+  F  M + G  P+  T+ T +   
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647

Query: 241 IRNNETSKVVELLHRMDE 258
            R        +++ +M E
Sbjct: 648 CREGRLLDAEDMMAKMRE 665



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 122/236 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A RLL LM  RG+ P+ + Y+++ID  C +  ++ A +LF S++  G   NVV Y  L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYCK   V+E+  +  +MLSK   P  +T+N L HGL    +++ A  L ++M    +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               ST    I  L K+G    A   F+ +     +     Y+  I   C+ G+L  A +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +   +   G+ P++ TY+ +I G+ + GQ + A D+   M   G  P+  TF +L+
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 57/308 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D + Q+GV PN  +Y+ LIDG+C  G++D A  +   M    C+ N +T+N 
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++E+  L  +M+  G++PTV T   L H L +    +HA   F +M  S 
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK----- 175
              +  TY TFI   C+ G +++A ++   +R       +  YS LI G   +G+     
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692

Query: 176 ------------------------------------------------LETAWELFQSLP 187
                                                            +T  EL + + 
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLMLGCI---RN 243
              + PN  +Y  +I G C  G +  A  +F  M+  +G++P+ + FN L+  C    ++
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812

Query: 244 NETSKVVE 251
           NE +KVV+
Sbjct: 813 NEAAKVVD 820



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 19/256 (7%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++  M + GV P+ F YS+LI G+   G+ + A ++   M   GC  +  T+ +LI
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714

Query: 63  N-----GYCKTKDVEESL-------------NLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
                  Y K K  E  L              L  +M+   + P   +Y  L  G+ E+ 
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774

Query: 105 QVEHALKLFDEMQHSD-VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
            +  A K+FD MQ ++ ++     +N  +   CK     EAA++   +  +     +E+ 
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
             LI GL K G+ E    +FQ+L + G   + + + I+I G    G ++  ++LF  ME 
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894

Query: 224 KGVAPNCVTFNTLMLG 239
            G   +  T++ L+ G
Sbjct: 895 NGCKFSSQTYSLLIEG 910



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 1/169 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYNT 60
           D    LL+ M++  V PNA  Y  LI G C  G +  A ++F  M  N G   + + +N 
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK K   E+  +  +M+  G  P + +   L  GL++  + E    +F  +    
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
              +   +   IDG+ K G +    ELF  +    C+   + YS LI+G
Sbjct: 862 YYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 56/103 (54%)

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           LK +L I  Y+ L++ L + G ++   +++  +    + PN+ TYN M++G+C  G +++
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           A+     +   G+ P+  T+ +L++G  +  +     ++ + M
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 136/295 (46%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L++ +   G  P    Y+ L++G C  G ++ A +L   +  NGC  +VVTY +
Sbjct: 50  IQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 109

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K K   E+  L+ EM S+G+    V Y  L  GL +  ++  A  ++  M    
Sbjct: 110 LIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 169

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL----------------------RVLKCEL 158
              +  T +T IDGLCK G I  A  +F+++                      R + C L
Sbjct: 170 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 229

Query: 159 GIEA-------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            + A             Y+ LIDGLCK G +  A   F  +   G  P+V TYNI+I GF
Sbjct: 230 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGF 289

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C  G  D A  +F DM +   +PN VT+ TL+ G  +  + +K       M ER 
Sbjct: 290 CKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG 344



 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M  RG+  +   Y+ LI G    G+I +A  ++ +M   GC+ +VVT +T+I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +  ++ ++  M ++G+ P  V Y+ L HGL +  +++ AL++  +M+ +   
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TYN  IDGLCK+G +  A   F  +    C+  +  Y+ LI G CK G  + A  +
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +      PNVVTY  +I G C   Q+ KA   +  M+ +G  P+   +++L+ G  +
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCK 361

Query: 243 NNETSKVVELLHRMDE 258
           + +      L   M+ 
Sbjct: 362 SGKLEGGCMLFDEMER 377



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L       G   +   Y+T++D      +I  A  L   +  NGC   + TYN L+
Sbjct: 17  QAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 76

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   +EE+++L  +++  G  P VVTY +L  GL +  +   A KLF EM    +A
Sbjct: 77  NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLA 136

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T  Y   I GL + G I +A+ +++T+    C   +   S +IDGLCK G++  A  +
Sbjct: 137 LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRI 196

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+S+   GL PN V Y+ +IHG C   +MD A ++   M+     P+ +T+N L+ G  +
Sbjct: 197 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 256

Query: 243 NNETSKVVELLHRMDE 258
           + + +        M E
Sbjct: 257 SGDVAAARAFFDEMLE 272



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 1/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +AS +   M  +G  P+    ST+IDG C  G I  A  +F SM+  G   N V Y+ 
Sbjct: 155 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 214

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK + ++ +L + ++M      P  +TYN L  GL +   V  A   FDEM  + 
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG 274

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  I G CK G    A  +F  +   +C   +  Y  LI GLCK  +L  A 
Sbjct: 275 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS 334

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             +Q +   G  P+   Y+ ++ G C  G+++    LF +ME  GVA N  T   L+   
Sbjct: 335 LYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHL 393

Query: 241 IRNNETSKVVELLH 254
            + N   + V L +
Sbjct: 394 CKANRVDEAVSLFN 407



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 130/236 (55%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           +S LI+G    G + +A  L      NGC  ++ TY T+++   K K ++E++ L  ++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           + G  PT+ TYN L +GL ++ ++E A+ L  ++  +    +  TY + IDGL K     
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA +LF+ +      L    Y+ LI GL + GK+  A  +++++   G +P+VVT + MI
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            G C  G++  A  +F  MEA+G+APN V ++ L+ G  +  +    +E+L +M +
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 237



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 8/224 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  +L  M +    P+   Y+ LIDG C +G++  AR  F  M   GC  +V TYN 
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNI 284

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  + + +  ++ +M S    P VVTY TL  GL +  Q+  A   +  M+   
Sbjct: 285 LISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG 344

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI---EAYSCLIDGLCKIGKLE 177
              ++  Y++ +DGLCK+G +     LF  +       G+   +  + LI  LCK  +++
Sbjct: 345 CPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME----RSGVANSQTRTRLIFHLCKANRVD 400

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            A  LF ++ + G MP+   YN +I      G++++   ++ +M
Sbjct: 401 EAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 103/204 (50%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           T++ LING  K   + ++ +L  E  + G    + TY T+   L +  +++ A+ L +++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
             +      +TYN  ++GLCK G + EA +L R +    C   +  Y+ LIDGL K  + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A++LF+ +   GL  + V Y  +I G    G++ +A  ++  M ++G  P+ VT +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  +       V +   M+ R 
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARG 204


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 147/257 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL+ M +RGV P+   ++TLI G+C+ G++D+A +LF +M       ++VTYNTLI
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 443

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+  D++++ +L+ +M S+ I P  VTY+ L     E  QVE A    DEM +  + 
Sbjct: 444 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 503

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I G C++G + +  +  + + V K    +  Y+ LI G  K  K+  A++L
Sbjct: 504 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 563

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + +  + P+VVTYN++I+GF   G + +A  +F  M AKG+ P+  T+ +++ G + 
Sbjct: 564 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 623

Query: 243 NNETSKVVELLHRMDER 259
              + +  +L   M +R
Sbjct: 624 AGNSKEAFQLHDEMLQR 640



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 144/259 (55%), Gaps = 2/259 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L+D M+ +G++P    Y++++ G C +G  D+A E+F  MD  G   +V ++  L
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHSD 120
           I G+C+  ++EE+L +Y EM  +GI+P +V+++ L  GLF    +++HA+    EM+   
Sbjct: 268 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHAMAYLREMRCFG 326

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   I G C+ G + +A  +   +    C   +  Y+ L++GLCK  +L  A 
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+ P++ T+  +IHG+C +G++DKA  LF  M  + + P+ VT+NTL+ G 
Sbjct: 387 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 446

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  K  +L   M  R
Sbjct: 447 CRQGDLDKANDLWDDMHSR 465



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++   M  RG++P+   +S LI  F   G++D A      M   G + + V Y  
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G+C+   + ++L +  EM+  G  P VVTYNTL +GL +  ++  A  L +EM+   
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+ T I G C  G + +A +LF T+   +    I  Y+ LIDG+C+ G L+ A 
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +    + PN VTY+I+I   C  GQ++ A     +M  KG+ PN +T+N+++ G 
Sbjct: 457 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 516

Query: 241 IRNNETSKVVELLHRM 256
            R+   SK  + L +M
Sbjct: 517 CRSGNVSKGQKFLQKM 532



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 122/229 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +L D M+ + +RP+   Y+TLIDG C  G++D+A +L+  M       N VTY+ 
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 476

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C+   VE++     EM++KGI P ++TYN++  G      V    K   +M  + 
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+ +  TYNT I G  K   + +A +L   +   K +  +  Y+ LI+G    G ++ A 
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 596

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            +F+ +   G+ P+  TY  MI+G    G   +A  L  +M  +G AP+
Sbjct: 597 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 124/241 (51%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N +  + ++  +C   E D+   +   M+      +VVT+N +++   +  D E ++ L 
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M+SKG++P +VTYN++  GL      + A ++F EM    VA +  ++   I G C+ 
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G I EA ++++ +R    +  + ++SCLI    + GK++ A    + +   GL+P+ V Y
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            ++I GFC  G M  A  +  +M   G  P+ VT+NTL+ G  +         LL+ M E
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394

Query: 259 R 259
           R
Sbjct: 395 R 395



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 126/255 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+   ++  M +R V P+   ++ ++D     G+ + A  L  SM   G    +VTYN++
Sbjct: 173 DKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSV 232

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G C++   +++  ++ EM   G+ P V ++  L  G   + ++E ALK++ EM+H  +
Sbjct: 233 LKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGI 292

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +++  I    + G +  A    R +R          Y+ +I G C+ G +  A  
Sbjct: 293 KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALR 352

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +   G +P+VVTYN +++G C + ++  A  L  +M  +GV P+  TF TL+ G  
Sbjct: 353 VRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYC 412

Query: 242 RNNETSKVVELLHRM 256
              +  K ++L   M
Sbjct: 413 IEGKLDKALQLFDTM 427



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 77/182 (42%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           + S +L     P    ++ L     +  +   A + F  +    V    +  N  +  L 
Sbjct: 73  IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 132

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G+   AA+ +R +     E+     + ++   CK  + +    +   + +  + P+VV
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+N+M+      G  + A  L   M +KG+ P  VT+N+++ G  R+    K  E+   M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 257 DE 258
           D+
Sbjct: 253 DD 254


>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   G +P+ + YS LI+G C  G++D A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK + V+ ++ +Y +MLS+G+ P ++TYNTL +GL +  +++    L DEM  + 
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y T IDG CK G +  A EL   +      L   AY+ LI  LC+ G+   A 
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++I+ FC       A  L  +M+  G  P  VT
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + D + + G+RP+   ++TLI+G+   G++D    L  +M  +G   +V TY+ 
Sbjct: 152 MRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSI 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++E+  L++EML  G+ P  VT+ TL HG  +  +V+ A++++ +M    
Sbjct: 212 LINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TYNT I GLCK G + +  +L   + +   +    +Y+ LIDG CK G LE A 
Sbjct: 272 LSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIAL 331

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + +  +  + V Y  +I   C +G+   A  +  +M + G+ P+  T+  ++   
Sbjct: 332 ELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEF 391

Query: 241 IRNNETSKVVELLHRM 256
            +  ++    +LL  M
Sbjct: 392 CKKRDSKTASKLLREM 407



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 126/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GE+  A+ +F ++   G   +VV++NTLINGY K  D++E 
Sbjct: 131 GYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L S M + G +P V TY+ L +GL +  +++ A +LF+EM  + +     T+ T I G
Sbjct: 191 FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKN  +  A E+++ +        +  Y+ LI GLCK G+L+   +L   +   GL P+
Sbjct: 251 HCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            ++Y  +I G C +G ++ A +L   M  + +  + V +  L+    R        ++L 
Sbjct: 311 KISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 98/181 (54%)

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           + Y E+L  G   ++  +N L     +  ++  A  +FD +    +     ++NT I+G 
Sbjct: 122 DFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGY 181

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            K G + E   L   +     +  +  YS LI+GLCK GKL+ A ELF  +   GL+PN 
Sbjct: 182 IKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNG 241

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VT+  +IHG C + ++D A +++  M ++G++P+ +T+NTL+ G  +  E  +V +L+  
Sbjct: 242 VTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDE 301

Query: 256 M 256
           M
Sbjct: 302 M 302



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 2/222 (0%)

Query: 37  DRARELFVS-MDINGC-MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           D A ++F + ++  G  + +   ++ L+  Y ++  V +++  +       IR    T  
Sbjct: 46  DSASDVFEAILETKGTQISDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCR 105

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            +   L E    +     + E+      A    +N  +   CK G +  A  +F  +   
Sbjct: 106 KVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKW 165

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                + +++ LI+G  K+G L+  + L  ++   G  P+V TY+I+I+G C +G++D+A
Sbjct: 166 GLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEA 225

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           ++LF +M   G+ PN VTF TL+ G  +N +    +E+  +M
Sbjct: 226 NELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQM 267


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  156 bits (394), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 134/242 (55%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G RPNAF Y+ L+DG C    +D AR +           +VVTYNTL+    +   V+E+
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEA 186

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L  +++M  +G  PT+V++N +  GL    ++  AL++F+EM   D      TY+  IDG
Sbjct: 187 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 246

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + EA +L   +    C   + AY+ L+ G    G+L++A  L + +   G +P+
Sbjct: 247 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 306

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTY ++I   C  G++D AH++F ++ A   +PN VT++ L+ G  R +   +  +++ 
Sbjct: 307 VVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 366

Query: 255 RM 256
            M
Sbjct: 367 EM 368



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 3/236 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA      M + G  P    ++ +I G C    +  A E+F  M       N+VTY+ 
Sbjct: 183 VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSV 242

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+  ++E+  L   M+S+G RP +V Y  L  G     +++ AL L   M    
Sbjct: 243 VIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 302

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   ID LCK G + +A E+FR L   KC   +  YS LI G C+  +++   
Sbjct: 303 CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGG 362

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           ++ + +      PNVVTYN MI G     + ++A+ +F +M   G  P+  T+  L
Sbjct: 363 KVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 125/275 (45%), Gaps = 37/275 (13%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHN------------------------ 54
           ++  Y+ LI GFC   ++D A  L   MD+ G   N                        
Sbjct: 24  SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83

Query: 55  ------------VVTYNTLINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLF 101
                       VV+Y TLING CK   V+ + +L+ +M++  G RP   TYN L  GL 
Sbjct: 84  DASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC 143

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           +  +++ A  +  E +  D A +  TYNT +  L + G + EA   F  +        + 
Sbjct: 144 KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV 203

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           +++ +I GLC+  +L  A E+F  +      PN+VTY+++I G C   Q+D+A  L   M
Sbjct: 204 SFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRM 263

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            ++G  P+ V +  L+LG          + LL RM
Sbjct: 264 VSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 298



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 6/209 (2%)

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD- 114
           VTYN LI G+C   D++ + +L  EM  +G++    T + +  GL    +V  AL+ FD 
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 115 --EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLC 171
             E+ H+    +  +Y T I+GLCK G +  A +LFR +     C      Y+ L+DGLC
Sbjct: 86  SLELAHAQ--PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC 143

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K  +L+ A  +     +    P+VVTYN ++      G++D+A   F  M  +G  P  V
Sbjct: 144 KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV 203

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +FN ++ G  R    +  +E+ + M +R+
Sbjct: 204 SFNAIITGLCRARRLADALEVFNEMIDRD 232



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 3/155 (1%)

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            AL+LF E     + A + TYN  I G C    +  A  L R + V   +      S ++
Sbjct: 9   QALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIIL 67

Query: 168 DGLCKIGKLETAWELFQ-SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKG 225
            GLC+ G++  A E F  SL      P+VV+Y  +I+G C  G++D A DLF  M  A G
Sbjct: 68  QGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG 127

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             PN  T+N L+ G  + +       ++    +R+
Sbjct: 128 CRPNAFTYNALVDGLCKQDRLDAARAVITEARKRD 162



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 3/110 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   ++     PN   YS LI G+C    +D   ++   M    C  NVVTYNT
Sbjct: 323 VDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNT 379

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           +I G       EE+  ++ EM   G  P   TY  L   L  I Q  H L
Sbjct: 380 MIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQPPHVL 429


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 135/258 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D   R    MI  G +P  F Y+ +ID     G+I+ AR LF  M   G + + VTYN++
Sbjct: 115 DGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSM 174

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K   +++++  + EM S    P V+TYN+L +   +  ++   L+ + EM+ S +
Sbjct: 175 IDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGL 234

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                +Y+T +D  CK   + +A + +  +R +        Y+ L+D  CKIG L  A+ 
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFR 294

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +  VG+  NVVTY  +I G C+  +M +A  LF  M   GV PN  ++N L+ G +
Sbjct: 295 LANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFV 354

Query: 242 RNNETSKVVELLHRMDER 259
           +     + +ELL+ +  R
Sbjct: 355 KAKNMDRALELLNELKGR 372



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 138/251 (54%), Gaps = 3/251 (1%)

Query: 3   EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA+R L + M  RG+ P+   Y+++IDG+   G +D     F  M    C  +V+TYN+L
Sbjct: 150 EAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSL 209

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +CK+  + + L  Y EM   G++P VV+Y+TL     +   ++ A+K + +M+    
Sbjct: 210 INCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH 269

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY + +D  CK G + +A  L   +  +  E  +  Y+ LIDGLC   +++ A +
Sbjct: 270 VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEK 329

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC- 240
           LF  +   G++PN+ +YN +IHGF     MD+A +L  +++ +G+ P+ + + T + G  
Sbjct: 330 LFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLC 389

Query: 241 -IRNNETSKVV 250
            +   E +KVV
Sbjct: 390 GLEKIEAAKVV 400



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 135/259 (52%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL + M++ GV  N   Y+ LIDG C    +  A +LF  M   G + N+ +YN 
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K K+++ +L L +E+  +GI+P ++ Y T   GL  + ++E A  + +EMQ + 
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A T  Y T +D   K+G   E   L   ++ L  E+ +  +  LIDGLCK   +  A 
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAI 468

Query: 181 ELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + F  +    GL PN   Y  MI G C + Q+  A  LF  M  +G+ P+   + +LM G
Sbjct: 469 DYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDG 528

Query: 240 CIRNNETSKVVELLHRMDE 258
            ++     + + L  +M E
Sbjct: 529 NLKQGNMLEALALRDKMAE 547



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 125/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+     + M      P+   Y++LI+ FC +G++ +  E +  M  +G   NVV+Y+T
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +CK   +++++  Y +M   G  P   TY +L     +I  +  A +L +EM    
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   IDGLC    + EA +LF  +        + +Y+ LI G  K   ++ A 
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   L   G+ P+++ Y   I G C   +++ A  +  +M+  G+  N + + TLM   
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423

Query: 241 IRNNETSKVVELLHRMDE 258
            ++   ++ + LL  M E
Sbjct: 424 FKSGNPTEGLHLLEEMQE 441



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 4/216 (1%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           ++S LID     G ++ A + F  M          + N L++ + K    +     + +M
Sbjct: 69  LFSVLID----LGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           +  G +PTV TYN +   +++   +E A  LF+EM+   +  +T TYN+ IDG  K G +
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            +    F  ++ + CE  +  Y+ LI+  CK GKL    E ++ + + GL PNVV+Y+ +
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +  FC +  M +A   ++DM   G  PN  T+ +L+
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLV 280



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 114/247 (46%), Gaps = 6/247 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  LL+ +  RG++P+  +Y T I G C   +I+ A+ +   M  NG   N + Y T
Sbjct: 359 MDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTT 418

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
           L++ Y K+ +  E L+L  EM       TVVT+  L  GL +   V  A+  F  M +  
Sbjct: 419 LMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDF 478

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +    + Y   IDGLCK   +  A  LF  +          AY+ L+DG  K G +  A
Sbjct: 479 GLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEA 538

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN---CVTF--N 234
             L   +  +G+  +++ Y  ++ GF    Q+ KA     +M  + + P+   C+     
Sbjct: 539 LALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKK 598

Query: 235 TLMLGCI 241
              LGCI
Sbjct: 599 HYELGCI 605



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 83/171 (48%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P    ++ LF  L ++  +E A + F +M+   V  +T + N  +    K G        
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F+ +     +  +  Y+ +ID + K G +E A  LF+ +   GL+P+ VTYN MI G+  
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            G++D     F +M++    P+ +T+N+L+    ++ +  K +E    M +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQ 231



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 54/109 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ L + M Q G+ P+   Y++L+DG    G +  A  L   M   G   +++ Y +L+ 
Sbjct: 503 ATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVW 562

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           G+ +   ++++ +   EM+ + I P  V    +    +E+  ++ A+ L
Sbjct: 563 GFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGL 611


>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 376

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P    YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L       G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 133/254 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  N   YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  + +A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+   +++  V P+A VY+ +++G+    +I    EL+  M   G   +V ++N 
Sbjct: 6   IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNI 64

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      V+E ++++  M   G     +TY  L HG  +   ++ +L + +  +   
Sbjct: 65  MMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  I+GLCK   +  A  +   +    C+     Y+ LI+GL    K E A 
Sbjct: 125 GVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAI 184

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +  +   P ++TYN +I+G C +    +A++L  ++  KG+ P  +T++ LM G 
Sbjct: 185 RVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGL 244

Query: 241 IRNNETSKVVELLHRMDER 259
             +++  K ++L +++  +
Sbjct: 245 CLDHKVEKALQLWNQVTSK 263



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 111/213 (52%), Gaps = 1/213 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M S+G R +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ S    ++ TY   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  +   AYS +I+GLCK   L+ A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            + A  +F +M     +P  +T+NTL+ G  +N
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKN 212


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  L D M QR + PNA  Y  LI G C  G+++ A  L + M   G   N+V +NT
Sbjct: 338 MKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNT 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++GYC+   ++E+L L + M  KGI   V TYN L +GL ++H+ + A  + + M    
Sbjct: 398 TMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKG 457

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T+  FI+  CK G + EA  LFR +        I  Y+ LID  CK  K++ A 
Sbjct: 458 VKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAH 517

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   GL+P++ TY+ +IHG C  G++D+A  LF +M  KG+  N  T+ +++ G 
Sbjct: 518 KIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGL 577

Query: 241 IRNNETSKVVELLHRM 256
            +     +  +L   M
Sbjct: 578 SKEGRADEAFKLYDEM 593



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 138/276 (50%), Gaps = 42/276 (15%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDR--ARELFVSMDINGCMHNVVT 57
           +++A  L+D M+ +G V+PN F Y+TL++ +   G  DR    E+   M+    + +V T
Sbjct: 232 VEKAKELMDEMVGKGIVKPNVFTYNTLLNAY--VGRKDRKGVDEILKLMEKEQVVFSVAT 289

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y+ LI  Y  + D+EE+  ++ EM  K I   V  Y+++      +  ++ A  LFDEM 
Sbjct: 290 YSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMS 349

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAE----------------LFRT----------- 150
             D+     TY   I G+CK G + EAAE                +F T           
Sbjct: 350 QRDIVPNAHTYGALIGGVCKAGQM-EAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKM 408

Query: 151 -----LRVLKCELGIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
                L+ +  + GI A    Y+ L +GLCK+ + + A  +  S+   G+ PNVVT+ + 
Sbjct: 409 DEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMF 468

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           I  +C +G + +A  LF DME KG  PN +T+NTL+
Sbjct: 469 IEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLI 504



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 127/242 (52%), Gaps = 1/242 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++ + M ++ +  + +VYS++I      G + RA  LF  M     + N  TY  
Sbjct: 303 IEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGA 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK   +E +  L  EM SKG+   +V +NT   G     +++ AL+L   M+   
Sbjct: 363 LIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKG 422

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TYN   +GLCK     EA  +  ++     +  +  ++  I+  CK G L  A 
Sbjct: 423 INADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAE 482

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            LF+ + + G +PN++TYN +I  +C   ++ +AH +  +M  KG+ P+  T+++L+ G 
Sbjct: 483 RLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGE 542

Query: 240 CI 241
           CI
Sbjct: 543 CI 544



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 111/205 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA RL  +M ++G+  + F Y+ L +G C     D A+ +  SM   G   NVVT+  
Sbjct: 408 MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTM 467

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I  YCK  ++ E+  L+ +M  KG  P ++TYNTL     +  +V+ A K+  EM +  
Sbjct: 468 FIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKG 527

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY++ I G C  G + EA +LF  +R+      +  Y+ +I GL K G+ + A+
Sbjct: 528 LLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAF 587

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L+  + ++GL+P+   +  ++  F
Sbjct: 588 KLYDEMMKIGLIPDDRVFTSLVGSF 612



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 131/263 (49%), Gaps = 8/263 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNT 60
           DE  R+ D + ++G+         L+      GE+D     F  M + N     V +   
Sbjct: 162 DETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTL 221

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFH---GLFEIHQVEHALKLFDEM 116
           +I+  C+  +VE++  L  EM+ KGI +P V TYNTL +   G  +   V+  LKL   M
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKL---M 278

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +   V    +TY+  I     +G I EA ++F  +R    E+ +  YS +I    ++G +
Sbjct: 279 EKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNM 338

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A+ LF  + +  ++PN  TY  +I G C  GQM+ A  L L+M++KGV  N V FNT 
Sbjct: 339 KRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTT 398

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           M G  R  +  + + L   M+++
Sbjct: 399 MDGYCRRGKMDEALRLQAIMEKK 421



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 75/137 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA RL   M ++G  PN   Y+TLID +C   ++ +A ++   M   G + ++ TY++
Sbjct: 478 LAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSS 537

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    V+E+L L++EM  KGI   V TY ++  GL +  + + A KL+DEM    
Sbjct: 538 LIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIG 597

Query: 121 VAAETSTYNTFIDGLCK 137
           +  +   + + +    K
Sbjct: 598 LIPDDRVFTSLVGSFHK 614



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/207 (19%), Positives = 95/207 (45%), Gaps = 3/207 (1%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY-NTLFHGLFEIHQVEHALKLFDE 115
           T  +++NG     D+E  ++   +++ +     V  + + LF    +    +  ++++D 
Sbjct: 111 TMKSILNGLVTDSDIECPVSSIVDLVDEFESHFVEKFCDMLFRVCSDNRLFDETIRVYDY 170

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIG 174
           ++   +  E  +    +  L + G +      F R +   K E+ +++ + +ID LC+ G
Sbjct: 171 VEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRG 230

Query: 175 KLETAWELFQSLPRVGLM-PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           ++E A EL   +   G++ PNV TYN +++ +          ++   ME + V  +  T+
Sbjct: 231 EVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATY 290

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           + L+     + +  +  ++   M E+N
Sbjct: 291 SILIQWYSSSGDIEEAEKIFEEMREKN 317


>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 376

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P    YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L       G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +N++IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 127/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C  N++TYNT
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  N   YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    P ++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  + +A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 1/213 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M S+G R +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ S    ++ TY   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK   L+ A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            + A  +F +M     +PN +T+NTL+ G  +N
Sbjct: 180 FEDAIRVFREMGTMHCSPNIITYNTLINGLCKN 212



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 130/259 (50%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+   +++  V P+A VY+ +++G+    +I    EL+  M   G   +V ++N 
Sbjct: 6   IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNI 64

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      V+E ++++  M   G     +TY  L HG  +   ++ +L + +  +   
Sbjct: 65  MMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  I+GLCK   +  A  +   +    C+     Y+ LI+GL    K E A 
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAI 184

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +  +   PN++TYN +I+G C +    +A++L  ++  KG+ P  +T++ LM G 
Sbjct: 185 RVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGL 244

Query: 241 IRNNETSKVVELLHRMDER 259
             +++  K ++L +++  +
Sbjct: 245 CLDHKVEKALQLWNQVTSK 263


>gi|255660982|gb|ACU25660.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 350

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 49  VDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSA 108

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P    YNTL +GL    + E A+++F EM    
Sbjct: 109 MINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMH 168

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L       G+  YS L+ GLC   K+E A 
Sbjct: 169 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKAL 228

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 229 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 288

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 289 YKDGDIRNALVIWARI 304



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 119 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 178

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 179 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 238

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 239 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 298

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 299 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 350



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 133/254 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  N   YNT
Sbjct: 84  IDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNT 143

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 144 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 203

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  + +A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 204 LNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 263

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 264 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 323

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 324 CSCNRISDAILFLH 337



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 115/236 (48%), Gaps = 36/236 (15%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N ++NGY +   +++   L+  M S+G R +V ++N +  GLF+  +V+  + +++ M+ 
Sbjct: 3   NAMLNGYFRVAKIKDCFELWEMMGSEGNR-SVSSFNIMMRGLFDNDKVDEVISIWELMKK 61

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEA-----------------------------AELFR 149
           S    ++ TY   + G CKNGYI ++                             A L R
Sbjct: 62  SGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDR 121

Query: 150 TLRVLK------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
            + VL       C+     Y+ LI+GL    K E A  +F+ +  +   P ++TYN +I+
Sbjct: 122 AVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLIN 181

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G C +    +A++L  ++  KG+ P  +T++ LM G   +++  K ++L +++  +
Sbjct: 182 GLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSK 237


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 130/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L  M+ R   PN   Y+TLI   C    ++ A EL   +   G + +V T+N+
Sbjct: 353 IDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNS 412

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C T + E ++ L+ EM  KG  P   TY+ L   L    +++ AL L  EM+ S 
Sbjct: 413 LIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSG 472

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A     YNT IDGLCKN  + +A ++F  + +L        Y+ LI+GLCK  ++E A 
Sbjct: 473 CARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAA 532

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL P+  TY  M+  FC  G + +A D+  +M   G  P+ VT+ TL+ G 
Sbjct: 533 QLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGL 592

Query: 241 IRNNETSKVVELLH 254
            +        +LL 
Sbjct: 593 CKAGRVDVASKLLR 606



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 128/236 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M ++G  P+ F YS LI+  C    +  A  L   M+++GC  NVV YNTLI+
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLID 485

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   V ++ +++ +M   G+  + VTYNTL +GL +  +VE A +L D+M    +  
Sbjct: 486 GLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKP 545

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY T +   C+ G I  AA++ + + +  CE  I  Y  LI GLCK G+++ A +L 
Sbjct: 546 DKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLL 605

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +S+   G++     YN +I   C   +  +A  LF +M  KG  P+ +T+  +  G
Sbjct: 606 RSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRG 661



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 134/250 (53%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           ++D M+++G   + + Y++LI G C  GEID A E+   M    C  N VTYNTLI   C
Sbjct: 324 MMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLC 383

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   VE +  L   + SKG+ P V T+N+L  GL      E A++LF+EM+      +  
Sbjct: 384 KENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEF 443

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY+  I+ LC    + EA  L + + +  C   +  Y+ LIDGLCK  ++  A ++F  +
Sbjct: 444 TYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQM 503

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +G+  + VTYN +I+G C   ++++A  L   M  +G+ P+  T+ T++    +  + 
Sbjct: 504 EMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDI 563

Query: 247 SKVVELLHRM 256
            +  +++  M
Sbjct: 564 KRAADIVQNM 573



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 139/260 (53%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M   G   N  VY+TLIDG C    +  A ++F  M++ G   + VTYNT
Sbjct: 458 LKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNT 517

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK+K VEE+  L  +M+ +G++P   TY T+     +   ++ A  +   M  + 
Sbjct: 518 LINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNG 577

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T I GLCK G +  A++L R++++    L  +AY+ +I  LCK  + + A 
Sbjct: 578 CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAM 637

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ +   G  P+V+TY I+  G CN  G + +A D  ++M  KG+ P   +F  L  G
Sbjct: 638 RLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEG 697

Query: 240 CIRNNETSKVVELLHRMDER 259
               +    +++L++ + E+
Sbjct: 698 LCSLSMEDTLIQLINMVMEK 717



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 131/254 (51%), Gaps = 2/254 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R+ +LM++ G    +   + L++G C  G I+ A       +  G   + VT+N L+N
Sbjct: 253 ALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEE--GFCPDQVTFNALVN 310

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C+T  +++ L +   ML KG    V TYN+L  GL ++ +++ A+++   M   D   
Sbjct: 311 GLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEP 370

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            T TYNT I  LCK  ++  A EL R L        +  ++ LI GLC     E A ELF
Sbjct: 371 NTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELF 430

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G  P+  TY+I+I   C++ ++ +A  L  +ME  G A N V +NTL+ G  +N
Sbjct: 431 EEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKN 490

Query: 244 NETSKVVELLHRMD 257
           N      ++  +M+
Sbjct: 491 NRVGDAEDIFDQME 504



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 129/244 (52%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           + G  P+   ++ L++G C TG I +  E+   M   G   +V TYN+LI+G CK  +++
Sbjct: 295 EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEID 354

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E++ +   M+S+   P  VTYNTL   L + + VE A +L   +    V  +  T+N+ I
Sbjct: 355 EAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLI 414

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
            GLC       A ELF  ++   C+     YS LI+ LC   +L+ A  L + +   G  
Sbjct: 415 QGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCA 474

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            NVV YN +I G C + ++  A D+F  ME  GV+ + VT+NTL+ G  ++    +  +L
Sbjct: 475 RNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQL 534

Query: 253 LHRM 256
           + +M
Sbjct: 535 MDQM 538



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 129/254 (50%), Gaps = 8/254 (3%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEID---RARELFVSMDINGCMHNVVTYNTLIN 63
           +L+ M   G+RP+   ++TL+ GF    +++   R +EL V    +GC    V+ N L+N
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVE---SGCELTSVSVNVLVN 277

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   +EE+L    E   +G  P  VT+N L +GL     ++  L++ D M       
Sbjct: 278 GLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFEL 335

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN+ I GLCK G I EA E+   +    CE     Y+ LI  LCK   +E A EL 
Sbjct: 336 DVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELA 395

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + L   G++P+V T+N +I G C     + A +LF +M+ KG  P+  T++ L+      
Sbjct: 396 RVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSE 455

Query: 244 NETSKVVELLHRMD 257
               + + LL  M+
Sbjct: 456 RRLKEALMLLKEME 469



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 2/249 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+   V P+   ++ LI   C   ++  A  +   M   G   +  T+ TL+ G+ +  D
Sbjct: 190 MVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEAD 249

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           VE +L +   M+  G   T V+ N L +GL +  ++E AL+   E        +  T+N 
Sbjct: 250 VEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNA 307

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++GLC+ G+I +  E+   +     EL +  Y+ LI GLCK+G+++ A E+   +    
Sbjct: 308 LVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD 367

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             PN VTYN +I   C +  ++ A +L   + +KGV P+  TFN+L+ G    +     +
Sbjct: 368 CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAM 427

Query: 251 ELLHRMDER 259
           EL   M E+
Sbjct: 428 ELFEEMKEK 436



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 12/251 (4%)

Query: 8   LDLMIQR--GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           L L+++R   V+P+   Y+  +       ++     L   M  +    +V T+N LI   
Sbjct: 150 LFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRAL 209

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK   +  ++ +  +M + G+RP   T+ TL  G  E   VE AL++ + M  S     +
Sbjct: 210 CKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTS 269

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKLETAWE 181
            + N  ++GLCK G I EA      LR +  E G       ++ L++GLC+ G ++   E
Sbjct: 270 VSVNVLVNGLCKEGRIEEA------LRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLE 323

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +   G   +V TYN +I G C  G++D+A ++   M ++   PN VT+NTL+    
Sbjct: 324 MMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLC 383

Query: 242 RNNETSKVVEL 252
           + N      EL
Sbjct: 384 KENHVEAATEL 394



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 2/203 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN  ++   K   ++    L+S+M++  + P V T+N L   L + HQ+  A+ + ++M 
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           +  +  +  T+ T + G  +   +  A  +   +    CEL   + + L++GLCK G++E
Sbjct: 227 NYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIE 286

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A          G  P+ VT+N +++G C  G + +  ++   M  KG   +  T+N+L+
Sbjct: 287 EALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLI 344

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  E  + VE+LH M  R+
Sbjct: 345 SGLCKLGEIDEAVEILHHMVSRD 367



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 73/208 (35%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY-- 58
           ++EA++L+D MI  G++P+ F Y+T++  FC  G+I RA ++  +M +NGC  ++VTY  
Sbjct: 528 VEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGT 587

Query: 59  ---------------------------------NTLINGYCKTKDVEESLNLYSEM---- 81
                                            N +I   CK K  +E++ L+ EM    
Sbjct: 588 LIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKG 647

Query: 82  --------------------------------LSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
                                           L KGI P   ++  L  GL  +   +  
Sbjct: 648 DPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTL 707

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           ++L + +      +++ T  + I G  K
Sbjct: 708 IQLINMVMEKGRFSQSET--SIIRGFLK 733


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 138/255 (54%), Gaps = 4/255 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
            LD M +RGVRPN F+Y+ LI G C    I  A ++F  M     + ++VTYNTLI+GYC
Sbjct: 198 FLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYC 257

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K  +++ +  +   M  K + P ++T+N+L  GL ++ +++ A  L  EM+ +    +  
Sbjct: 258 KVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGY 317

Query: 127 TYNTFIDGL--CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           TY+   DGL  C +G    A EL+         +     S L++GLCK GK+E A E+ +
Sbjct: 318 TYSILFDGLLRCDDGN--GAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILK 375

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
                GL+ + V YN  ++G+C  G M+KA      ME+ G+ PN +TFN+L+       
Sbjct: 376 KFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMK 435

Query: 245 ETSKVVELLHRMDER 259
           E  K  E + +M E+
Sbjct: 436 EMDKAEEWVKKMAEK 450



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +L    + G+  +  +Y+T ++G+C  G++++A      M+  G   N +T+N+
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNS 426

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C  K+++++     +M  KG+ P+V TYNTL  G  ++   +   ++ ++M+   
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG 486

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     +Y + I+ LCK+G I+EA  + R +         + Y+ LIDG C +GK++ A 
Sbjct: 487 VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDAL 546

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  + R  + P +VTYN++I G C  G++ +A D    + + G +P+ +T+N+L+ G 
Sbjct: 547 RFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGY 606

Query: 241 IRNNETSKVVELLHRM 256
                 SK + L   M
Sbjct: 607 ANAGNVSKCLGLYETM 622



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A   +  M ++GV P+   Y+TLIDG+      DR  ++   M+  G   NVV+Y +
Sbjct: 437 MDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGS 496

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   + E+  +  +M+ +G+ P    YN L  G   + +V+ AL+ FDEM  S+
Sbjct: 497 LINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE 556

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAE---------------------------------- 146
           ++    TYN  IDGLCK G + EA +                                  
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616

Query: 147 -LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L+ T++ L  +  +  Y  LI G  K G +E   +L+  + ++ L+P+ V YN MIH +
Sbjct: 617 GLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCY 675

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              G   KA+ L   M  +G+ P+ +T+N+L+LG  R  + S + +L++ M  +
Sbjct: 676 AEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAK 729



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 132/254 (51%), Gaps = 2/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A   ++ M   G+RPN+  +++LID FC   E+D+A E    M   G   +V TYNT
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNT 461

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K    +    +  +M   G++P VV+Y +L + L +  ++  A  +  +M    
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      YN  IDG C  G + +A   F  +   +    +  Y+ LIDGLCK GKL  A 
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAE 581

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    +   G  P+V+TYN +I G+ N G + K   L+  M+  G+ P   T++ L+ GC
Sbjct: 582 DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGC 641

Query: 241 IRNNETSKVVELLH 254
            +  E  ++VE L+
Sbjct: 642 SK--EGIELVEKLY 653



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 123/237 (51%), Gaps = 1/237 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  MI RGV PNA VY+ LIDG C+ G++  A   F  M  +     +VTYN LI
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   + E+ +  +++ S G  P V+TYN+L  G      V   L L++ M++  + 
Sbjct: 569 DGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIK 628

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  I G  K G I    +L+  +  +        Y+ +I    +IG  + A+ L
Sbjct: 629 PTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSL 687

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            Q +   G+ P+ +TYN +I G   +G++    DL  +M+AK +AP   T++ L+ G
Sbjct: 688 HQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKG 744



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 121/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ + M ++ V PN   +++L+ G C   ++  AR L   M++NG M +  TY+ 
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G  +  D   ++ LY +   KGIR    T + L +GL +  +VE A ++  +   + 
Sbjct: 322 LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENG 381

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+   YNTF++G C+ G + +A      +           ++ LID  C + +++ A 
Sbjct: 382 LVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAE 441

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E  + +   G+ P+V TYN +I G+      D+   +   ME  GV PN V++ +L+
Sbjct: 442 EWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLI 498



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 1/239 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R  D M++  + P    Y+ LIDG C  G++  A +    +  +G   +V+TYN+
Sbjct: 542 VKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNS 601

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY    +V + L LY  M + GI+PTV TY+ L  G  +   +E   KL++EM   +
Sbjct: 602 LISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQMN 660

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I    + G   +A  L + +           Y+ LI G  + GKL    
Sbjct: 661 LLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIK 720

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L  ++    L P   TY+I++ G C+      A+  + +M      PN    N L  G
Sbjct: 721 DLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAG 779



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 4/220 (1%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           +LF+ ++ +G   +   Y   I    K ++++  +     M  +G+RP V  YN L  GL
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGL 221

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
               ++  A K+FDEM + ++     TYNT IDG CK G +  A ++   ++       I
Sbjct: 222 CREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNI 281

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF--CNDGQMDKAHDLF 218
             ++ L+ GLCK+ K++ A  L + +   G MP+  TY+I+  G   C+DG  + A +L+
Sbjct: 282 ITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG--NGAMELY 339

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
                KG+  N  T + L+ G  +  +  K  E+L +  E
Sbjct: 340 EQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTE 379



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 114/229 (49%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +  +  A EL+  M  +G + ++V+ + L +     K   + ++L+ E+ + G R   
Sbjct: 117 CKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDT 176

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
             Y        ++  ++  ++  D M+   V      YN  I GLC+   I +A ++F  
Sbjct: 177 FMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +  +     I  Y+ LIDG CK+G+L+ A+++ + +    + PN++T+N ++ G C   +
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           M +A  L  +ME  G  P+  T++ L  G +R ++ +  +EL  +  E+
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%)

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y+  I    K+  L+   E   S+ + G+ PNV  YN++I G C + ++  A  +F +M 
Sbjct: 179 YAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMC 238

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              +  + VT+NTL+ G  +  E     ++  RM E++
Sbjct: 239 NINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKS 276


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 144/251 (57%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D +I +G + N   Y TLIDG C  GE   A ++  ++D      NVV Y+T+I   CK 
Sbjct: 73  DDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKD 132

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K V ++ +LYS+ML K I P V+TYNTL +G   + +++ A+ LF++M   ++  +  T+
Sbjct: 133 KLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTF 192

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  +DGLCK G + +A  +   +     +  +  Y+ L+DG   + +   A  +F ++ R
Sbjct: 193 NILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMAR 252

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P+V +Y++MI+G C    +D+A +L  +M +K +APN VT+++L+ G  ++     
Sbjct: 253 RGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFD 312

Query: 249 VVELLHRMDER 259
             +L++ M  R
Sbjct: 313 AWDLVNEMHNR 323



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 141/280 (50%), Gaps = 21/280 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L + M+ + ++P+ + ++ L+DG C  GE+ +AR +   M       +V+TYN+
Sbjct: 170 LKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNS 229

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY   K   ++  +++ M  +G+ P V +Y+ + +GL +   V+ A+ L  EM    
Sbjct: 230 LMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKS 289

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A  T TY++ IDGL K+G I +A +L   +        +  Y+ L+D LCK  +++ A 
Sbjct: 290 MAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAI 349

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM---------------------DKAHDLFL 219
            L   +   G+ P++ TY I++ G C +G++                     DKA  L  
Sbjct: 350 TLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLS 409

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            ME  G  PN VTF  L+     N+   K VELL  M  R
Sbjct: 410 KMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIAR 449



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 134/247 (54%), Gaps = 21/247 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +L +MI++ V P+   Y++L+DG+ L  + ++A  +F +M   G   +V +Y+ 
Sbjct: 205 MKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSV 264

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CKTK V+E++NL  EM SK + P  VTY++L  GL +  ++  A  L +EM +  
Sbjct: 265 MINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRG 324

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TYN+ +D LCKN  + +A  L   ++    +  I  Y+ L+DGLCK G+L+ A 
Sbjct: 325 QPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQ 384

Query: 181 ELFQ---------------------SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           E++Q                      +   G  PN VT+ I+I     +   DKA +L  
Sbjct: 385 EVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLR 444

Query: 220 DMEAKGV 226
           +M A+G+
Sbjct: 445 EMIARGL 451



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 129/250 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M+ + + P+   Y+TL+ G  + G +  A  LF  M +     ++ T+N L+
Sbjct: 137 DAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILV 196

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  +++++ N+ + M+ + + P V+TYN+L  G F + Q   A  +F+ M    V 
Sbjct: 197 DGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVT 256

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +Y+  I+GLCK   + EA  L + +           YS LIDGL K G++  AW+L
Sbjct: 257 PDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDL 316

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G   +V+TYN ++   C + Q+DKA  L   ++ +G+ P+  T+  L+ G  +
Sbjct: 317 VNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCK 376

Query: 243 NNETSKVVEL 252
           N       E+
Sbjct: 377 NGRLKDAQEV 386



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 120/248 (48%), Gaps = 6/248 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK------TKDV 71
           P  F +  +               L   M++ G   ++V  N L+N +C          V
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E+L+ + ++++KG +   V+Y TL  GL +  +   A+++   +    V      Y+T 
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I  LCK+  +++A +L+  + + +    +  Y+ L+ G   +G+L+ A  LF  +    +
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            P++ T+NI++ G C +G+M KA ++   M  + V P+ +T+N+LM G     + +K   
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 252 LLHRMDER 259
           + + M  R
Sbjct: 246 VFNTMARR 253


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 147/257 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL+ M +RGV P+   ++TLI G+C+ G++D+A +LF +M       ++VTYNTLI
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+  D++++ +L+ +M S+ I P  VTY+ L     E  QVE A    DEM +  + 
Sbjct: 383 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 442

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I G C++G + +  +  + + V K    +  Y+ LI G  K  K+  A++L
Sbjct: 443 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 502

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + +  + P+VVTYN++I+GF   G + +A  +F  M AKG+ P+  T+ +++ G + 
Sbjct: 503 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 562

Query: 243 NNETSKVVELLHRMDER 259
              + +  +L   M +R
Sbjct: 563 AGNSKEAFQLHDEMLQR 579



 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 144/259 (55%), Gaps = 2/259 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L+D M+ +G++P    Y++++ G C +G  D+A E+F  MD  G   +V ++  L
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 206

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHSD 120
           I G+C+  ++EE+L +Y EM  +GI+P +V+++ L  GLF    +++HA+    EM+   
Sbjct: 207 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHAMAYLREMRCFG 265

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   I G C+ G + +A  +   +    C   +  Y+ L++GLCK  +L  A 
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+ P++ T+  +IHG+C +G++DKA  LF  M  + + P+ VT+NTL+ G 
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385

Query: 241 IRNNETSKVVELLHRMDER 259
            R  +  K  +L   M  R
Sbjct: 386 CRQGDLDKANDLWDDMHSR 404



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++   M  RG++P+   +S LI  F   G++D A      M   G + + V Y  
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G+C+   + ++L +  EM+  G  P VVTYNTL +GL +  ++  A  L +EM+   
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+ T I G C  G + +A +LF T+   +    I  Y+ LIDG+C+ G L+ A 
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 395

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +    + PN VTY+I+I   C  GQ++ A     +M  KG+ PN +T+N+++ G 
Sbjct: 396 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 455

Query: 241 IRNNETSKVVELLHRM 256
            R+   SK  + L +M
Sbjct: 456 CRSGNVSKGQKFLQKM 471



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 124/241 (51%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N +  + ++  +C   E D+   +   M+      +VVT+N +++   +  D E ++ L 
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M+SKG++P +VTYN++  GL      + A ++F EM    VA +  ++   I G C+ 
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G I EA ++++ +R    +  + ++SCLI    + GK++ A    + +   GL+P+ V Y
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            ++I GFC  G M  A  +  +M   G  P+ VT+NTL+ G  +         LL+ M E
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333

Query: 259 R 259
           R
Sbjct: 334 R 334



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 119/225 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +L D M+ + +RP+   Y+TLIDG C  G++D+A +L+  M       N VTY+ 
Sbjct: 356 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 415

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C+   VE++     EM++KGI P ++TYN++  G      V    K   +M  + 
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+ +  TYNT I G  K   + +A +L   +   K +  +  Y+ LI+G    G ++ A 
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 535

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            +F+ +   G+ P+  TY  MI+G    G   +A  L  +M  +G
Sbjct: 536 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 126/255 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+   ++  M +R V P+   ++ ++D     G+ + A  L  SM   G    +VTYN++
Sbjct: 112 DKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSV 171

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G C++   +++  ++ EM   G+ P V ++  L  G   + ++E ALK++ EM+H  +
Sbjct: 172 LKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGI 231

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +++  I    + G +  A    R +R          Y+ +I G C+ G +  A  
Sbjct: 232 KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALR 291

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +   G +P+VVTYN +++G C + ++  A  L  +M  +GV P+  TF TL+ G  
Sbjct: 292 VRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYC 351

Query: 242 RNNETSKVVELLHRM 256
              +  K ++L   M
Sbjct: 352 IEGKLDKALQLFDTM 366



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 77/182 (42%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           + S +L     P    ++ L     +  +   A + F  +    V    +  N  +  L 
Sbjct: 12  IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 71

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G+   AA+ +R +     E+     + ++   CK  + +    +   + +  + P+VV
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+N+M+      G  + A  L   M +KG+ P  VT+N+++ G  R+    K  E+   M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 257 DE 258
           D+
Sbjct: 192 DD 193


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 138/261 (52%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+  M    V P+A+ Y+TLI G C  G    A  +   M    C+ +VVTY  
Sbjct: 142 LDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTI 198

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK    ++++ L  EM  KG  P +VTYN + +G+ +  +V+ A++    +    
Sbjct: 199 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 258

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T +YN  + GLC      +A EL   +    C   +  ++ LI  LC+ G +E A 
Sbjct: 259 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 318

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD-MEAKGVAPNCVTFNTLMLG 239
           E+ + +P+ G  PN ++YN ++H FC   +MDKA   FLD M ++G  P+ V++NTL+  
Sbjct: 319 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM-AFLDLMVSRGCYPDIVSYNTLLTA 377

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R+ E    VELLH++ ++ 
Sbjct: 378 LCRSGEVDVAVELLHQLKDKG 398



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   L  +   G  PN   Y+ ++ G C     + A EL   M   GC  NVVT+N 
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 303

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C+   VE +L +  ++   G  P  ++YN L H   +  +++ A+   D M    
Sbjct: 304 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 363

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YNT +  LC++G +  A EL   L+   C   + +Y+ +IDGL K GK + A 
Sbjct: 364 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 423

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL P+++TY+ +  G C + +++ A   F  ++  G+ PN V +N ++LG 
Sbjct: 424 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 483

Query: 241 IRNNETSKVVELLHRM 256
            +  ET   ++L   M
Sbjct: 484 CKRRETHSAIDLFAYM 499



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 123/238 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L+  M Q+G  PN   ++ LI   C  G ++ A E+   +   GC  N ++YN L
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 339

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK K +++++     M+S+G  P +V+YNTL   L    +V+ A++L  +++    
Sbjct: 340 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 399

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    +YNT IDGL K G   EA EL   +     +  I  YS +  GLC+  ++E A  
Sbjct: 400 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            F  +  +G+ PN V YN +I G C   +   A DLF  M   G  PN  T+  L+ G
Sbjct: 460 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 125/250 (50%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +LD M++R   P+   Y+ L++  C      +A +L   M   GC  ++VTYN ++NG C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   V++++     + S G  P  V+YN +  GL    + E A +L  EM          
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N  I  LC+ G +  A E+   +    C     +Y+ L+   CK  K++ A      +
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  P++V+YN ++   C  G++D A +L   ++ KG AP  +++NT++ G  +  +T
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 247 SKVVELLHRM 256
            + +ELL+ M
Sbjct: 420 KEALELLNEM 429



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 126/258 (48%), Gaps = 12/258 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RL    +    RP+A   + LI     +G    AR +  +     C  +V+ YN 
Sbjct: 81  LDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRVLAA-----CGPDVMAYNA 131

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ GYC    ++ +  L +EM    + P   TYNTL  GL    +  +AL + DEM    
Sbjct: 132 MVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 188

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   ++  CK     +A +L   +R   C   I  Y+ +++G+C+ G+++ A 
Sbjct: 189 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 248

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E  ++LP  G  PN V+YNI++ G C   + + A +L  +M  KG  PN VTFN L+   
Sbjct: 249 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 308

Query: 241 IRNNETSKVVELLHRMDE 258
            R       +E+L ++ +
Sbjct: 309 CRKGLVEPALEVLEQIPK 326



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 123/226 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L+ + + G  PN+  Y+ L+  FC   ++D+A      M   GC  ++V+YNT
Sbjct: 314 VEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C++ +V+ ++ L  ++  KG  P +++YNT+  GL +  + + AL+L +EM    
Sbjct: 374 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 433

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T   GLC+   I +A   F  ++ +        Y+ +I GLCK  +  +A 
Sbjct: 434 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 493

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +LF  +   G MPN  TY I+I G   +G + +A DL  ++ ++GV
Sbjct: 494 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 107/192 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A   LDLM+ RG  P+   Y+TL+   C +GE+D A EL   +   GC   +++YNT
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K    +E+L L +EM+SKG++P ++TY+T+  GL    ++E A++ F ++Q   
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T  YN  I GLCK      A +LF  +    C      Y+ LI+GL   G ++ A 
Sbjct: 469 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 528

Query: 181 ELFQSLPRVGLM 192
           +L   L   G++
Sbjct: 529 DLLDELCSRGVV 540



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 141 IVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           +V   EL   LR++      +A +C  LI  L   G+   A  +  +       P+V+ Y
Sbjct: 75  LVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAY 129

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N M+ G+C  GQ+D A  L  +M    V P+  T+NTL+ G      T+  + +L  M  
Sbjct: 130 NAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 186

Query: 259 R 259
           R
Sbjct: 187 R 187


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 132/254 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L++ M +RG  PN   Y+ L++G C  G ++ A  +   M   G   N V YN LI 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C+ + V  +LNL SEM +KG +P + TYN+L +GL ++ +++ A +LF  M      A
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYNT I  L + G   +A  L   +    C L    Y+ LI   CK+G +E   EL+
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   GL  + ++ NIMI+G C  G++D A +   D   +G  P+ VT+N+++ G  + 
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648

Query: 244 NETSKVVELLHRMD 257
               + + L  R+ 
Sbjct: 649 GRIKEALNLFDRLQ 662



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 131/239 (54%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L  M  RG+  N+ +Y+ LI   C   ++  A  L   M   GC  ++ TYN+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK   ++E+  L+  ML  G     VTYNTL H L      + AL L ++M    
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
              +  TYN  I   CK G I +  EL+   +++   LG +  SC  +I+GLCK+GK++ 
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYE--QMIMDGLGADTISCNIMINGLCKVGKVDN 618

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A+E  +     G +P++VTYN +++G C  G++ +A +LF  ++ +GV P+  T+NT +
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 125/234 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M  +G +P+ F Y++LI G C    ID A  LF +M ++G + N VTYNTLI+
Sbjct: 479 ALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIH 538

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              +    +++L L ++ML +G     +TYN L     ++  +E  L+L+++M    + A
Sbjct: 539 ALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGA 598

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T + N  I+GLCK G +  A E  R          I  Y+ +++GLCK+G+++ A  LF
Sbjct: 599 DTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLF 658

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             L   G+ P+  TYN  I   C +G ++ A   F      G  P+ +T+N L+
Sbjct: 659 DRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLV 712



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 125/250 (50%), Gaps = 5/250 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +GV P  F +  ++   C+  E+D A  L   M  +GC+ N + Y TLI+   +   
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L L  EM   G  P V T+N + HGL +++++  A KL D M       +  TY  
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF-QSLPRV 189
            + GLC+ G + EA ++   L  + C       + LI+G    G+L+ A     +++   
Sbjct: 329 LLHGLCRIGKLNEARKI---LIKIPCP-NNAILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P++ TYNI++HG C +G +  A DL  +M  +G  PN +T+  L+ G  +     + 
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 250 VELLHRMDER 259
             +LH M  R
Sbjct: 445 GLVLHEMSAR 454



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 5/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M + G  PN+ VY TLI       ++  A +L   M + GCM +V T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   + ++  L   ML +G  P  +TY  L HGL  I ++  A K+  ++    
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP--- 350

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                +  NT I+G   +G + EA      T+     +  I  Y+ L+ GLCK G L  A
Sbjct: 351 -CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L   + R G  PNV+TY I+++G C  G +++A  +  +M A+G+  N V +N L+  
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICA 469

Query: 240 CIRNNETSKVVELLHRM 256
             R  +    + LL  M
Sbjct: 470 LCRKEKVHVALNLLSEM 486



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 32/286 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD----------INGCM 52
           +A++L+D M+ RG  P+   Y  L+ G C  G+++ AR++ + +           ING +
Sbjct: 306 DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYV 365

Query: 53  ----------------------HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                                  ++ TYN L++G CK   +  + +L +EM  +G  P V
Sbjct: 366 MSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNV 425

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +TY  L +GL +   +E A  +  EM    +   +  YN  I  LC+   +  A  L   
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C+  +  Y+ LI GLCK+ +++ A+ LF ++   G + N VTYN +IH     G 
Sbjct: 486 MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGA 545

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             KA  L  DM  +G   + +T+N L+    +     K +EL  +M
Sbjct: 546 FQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 102/203 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RL   M+  G   N   Y+TLI      G   +A  L   M   GC  + +TYN 
Sbjct: 511 IDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNG 570

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +CK  ++E+ L LY +M+  G+    ++ N + +GL ++ +V++A +   +  +  
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN+ ++GLCK G I EA  LF  L+V         Y+  I   CK G +  A 
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDAC 690

Query: 181 ELFQSLPRVGLMPNVVTYNIMIH 203
             F      G +P+ +T+N++++
Sbjct: 691 SFFYRGIENGFVPSNLTWNVLVY 713



 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++   L + MI  G+  +    + +I+G C  G++D A E        G + ++VTYN+
Sbjct: 581 IEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNS 640

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK   ++E+LNL+  +  +G+RP   TYNT      +   V  A   F     + 
Sbjct: 641 VLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENG 700

Query: 121 VAAETSTYNTFIDGLCK 137
                 T+N  +  L K
Sbjct: 701 FVPSNLTWNVLVYTLLK 717



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 57/116 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A   L   I RG  P+   Y+++++G C  G I  A  LF  + + G   +  TYNT
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNT 675

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            I+  CK   V ++ + +   +  G  P+ +T+N L + L +    E+   + DE+
Sbjct: 676 FISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 1/175 (0%)

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG   T   Y    + L  I + +   KL  +M+   +    S +   +    K G   
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 143 EAAELFRTLR-VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
           +A  L   +R V  CE   ++Y  +++ L      + A  +F  +   G+ P V T+ I+
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   C   ++D A  L  DM   G  PN + + TL+    + N+ S+ ++LL  M
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 137/258 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D + +    M   G++ + F Y+ +ID  C  G+++ AR LF  M   G   ++VTYN+L
Sbjct: 237 DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 296

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+ K   ++E + ++ +M      P V+TYN L +   +  ++  A +   EM+ + +
Sbjct: 297 IDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY+TFID  CK G + EA + F  +R +        Y+ LID  CK G L  A +
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 416

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + + + G+  NVVTY  ++ G C +G+M +A ++F  M   GVAPN  T+  L+ G I
Sbjct: 417 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 476

Query: 242 RNNETSKVVELLHRMDER 259
           +  E     ++L  M E+
Sbjct: 477 KAKEMEYAKDILKEMKEK 494



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 130/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M + G  P+   Y++LIDG    G +D    +F  M    C  +V+TYN 
Sbjct: 271 LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 330

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +CK + + ++     EM + G++P VVTY+T      +   ++ A+K F +M+   
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 390

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + ID  CK G + EA +L   +     +L +  Y+ L+DGLC+ G+++ A 
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 450

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+F+++   G+ PN  TY  ++HGF    +M+ A D+  +M+ K + P+ + + T++ G
Sbjct: 451 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 509



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 136/262 (51%), Gaps = 8/262 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +L++ ++Q G++ N   Y+ L+DG C  G +  A E+F +M   G   N  TY  
Sbjct: 411 LAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTA 470

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+ K K++E + ++  EM  K I+P ++ Y T+  GL    ++E A  L  E++ S 
Sbjct: 471 LVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 530

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           +      Y T +D   K+G   EA  L   +     +LG+ A    Y  LIDGLCK G +
Sbjct: 531 INTNAVIYTTLMDAYFKSGQATEALTLLEEM----LDLGLIATEVTYCALIDGLCKSGLV 586

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A   F  +  +GL PNV  Y  ++ G C +   + A  LF +M  KG+ P+ + +  L
Sbjct: 587 QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 646

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           + G +++    + + L  RM E
Sbjct: 647 IDGNMKHGNLQEALNLRDRMIE 668



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 126/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  +L  M ++ ++P+  +Y T++ G C    ++ A+ L   +  +G   N V Y T
Sbjct: 481 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 540

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ Y K+    E+L L  EML  G+  T VTY  L  GL +   V+ A+  F  M    
Sbjct: 541 LMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG 600

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    + Y   +DGLCKN     A +LF  +          AY+ LIDG  K G L+ A 
Sbjct: 601 LQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 660

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +  +G+  ++  Y  +I G  + GQ+ KA +L  +M  KGV P+ V +  L+   
Sbjct: 661 NLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 720

Query: 241 IRNNETSKVVELLHRMDER 259
               +  + +EL + M +R
Sbjct: 721 YALGKVDEALELQNEMAKR 739



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 121/258 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A   L  M   G++PN   YST ID FC  G +  A + FV M       N  TY +
Sbjct: 341 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTS 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  ++ E+L L  E+L  GI+  VVTY  L  GL E  +++ A ++F  M ++ 
Sbjct: 401 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA    TY   + G  K   +  A ++ + ++    +  +  Y  ++ GLC   +LE A 
Sbjct: 461 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 520

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+  N V Y  ++  +   GQ  +A  L  +M   G+    VT+  L+ G 
Sbjct: 521 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGL 580

Query: 241 IRNNETSKVVELLHRMDE 258
            ++    + +    RM E
Sbjct: 581 CKSGLVQEAMHHFGRMSE 598



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 120/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L+  + + G+  NA +Y+TL+D +  +G+   A  L   M   G +   VTY  
Sbjct: 516 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA 575

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+  V+E+++ +  M   G++P V  Y  L  GL + +  E A KLFDEM    
Sbjct: 576 LIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKG 635

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG  K+G + EA  L   +  +  EL + AY+ LI GL   G+++ A 
Sbjct: 636 MMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKAR 695

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            L   +   G++P+ V Y  +I  +   G++D+A +L  +M  +G+
Sbjct: 696 NLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 95/189 (50%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C+     ++ L +   +   +EE+   + +M    + P   + N L H L ++ + + 
Sbjct: 179 NVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDL 238

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           + K F +M  + +     TYN  ID LCK G +  A  LF  ++       I  Y+ LID
Sbjct: 239 SRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLID 298

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  K+G L+    +F+ +      P+V+TYN +I+ FC   +M KA +   +M+A G+ P
Sbjct: 299 GHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP 358

Query: 229 NCVTFNTLM 237
           N VT++T +
Sbjct: 359 NVVTYSTFI 367



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 79/169 (46%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P    ++ LF  L E+  +E A + F +M+   V  +  + N  +  L K G    + + 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F+ +     +  +  Y+ +ID LCK G LE A  LF  +   G  P++VTYN +I G   
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G +D+   +F  M+     P+ +T+N L+    +     K  E LH M
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM 351



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 35/119 (29%)

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSL--------PR------------------- 188
           C  G   +  L   L ++G LE A E F  +        PR                   
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240

Query: 189 --------VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                    G+  +V TYNIMI   C +G ++ A  LF  M+  G  P+ VT+N+L+ G
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 132/254 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L++ M +RG  PN   Y+ L++G C  G ++ A  +   M   G   N V YN LI 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C+ + V  +LNL SEM +KG +P + TYN+L +GL ++ +++ A +LF  M      A
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYNT I  L + G   +A  L   +    C L    Y+ LI   CK+G +E   EL+
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   GL  + ++ NIMI+G C  G++D A +   D   +G  P+ VT+N+++ G  + 
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648

Query: 244 NETSKVVELLHRMD 257
               + + L  R+ 
Sbjct: 649 GRIKEALNLFDRLQ 662



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 131/239 (54%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L  M  RG+  N+ +Y+ LI   C   ++  A  L   M   GC  ++ TYN+
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK   ++E+  L+  ML  G     VTYNTL H L      + AL L ++M    
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
              +  TYN  I   CK G I +  EL+   +++   LG +  SC  +I+GLCK+GK++ 
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYE--QMIMDGLGADTISCNIMINGLCKVGKVDN 618

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A+E  +     G +P++VTYN +++G C  G++ +A +LF  ++ +GV P+  T+NT +
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 125/250 (50%), Gaps = 5/250 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +GV P  F +  ++   C+  E+D A  L   M  +GC+ N + Y TLI+   +   
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+L L  EM   G  P V T+N + HGL +++++  A KL D M       +  TY  
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF-QSLPRV 189
            + GLC+ G + EA ++   L  + C       + LI+G    G+L+ A     +++   
Sbjct: 329 LLHGLCRIGKLNEARKI---LIKIPCP-NNAILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P++ TYNI++HG C +G +  A DL  +M  +G  PN +T+  L+ G  +     + 
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 250 VELLHRMDER 259
             +LH M  R
Sbjct: 445 GLVLHEMSAR 454



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 5/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M + G  PN+ VY TLI       ++  A +L   M + GCM +V T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   + ++  L   ML +G  P  +TY  L HGL  I ++  A K+  ++    
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP--- 350

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                +  NT I+G   +G + EA      T+     +  I  Y+ L+ GLCK G L  A
Sbjct: 351 -CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L   + R G  PNV+TY I+++G C  G +++A  +  +M A+G+  N V +N L+  
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICA 469

Query: 240 CIRNNETSKVVELLHRM 256
             R  +    + LL  M
Sbjct: 470 LCRKEKVHVALNLLSEM 486



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 125/234 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M  +G +P+ F Y++LI G C    ID A  LF +M ++G + N VTYNTLI+
Sbjct: 479 ALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIH 538

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              +    +++L L ++ML +G     +TYN L     ++  +E  L+L+++M    + A
Sbjct: 539 ALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGA 598

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T + N  I+GLCK G +  A E  R          I  Y+ +++GLCK+G+++ A  LF
Sbjct: 599 DTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLF 658

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             L   G+ P+  TYN  I   C +G ++ A   F      G  P+ +T+N L+
Sbjct: 659 DRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV 712



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 32/286 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD----------INGCM 52
           +A++L+D M+ RG  P+   Y  L+ G C  G+++ AR++ + +           ING +
Sbjct: 306 DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYV 365

Query: 53  ----------------------HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                                  ++ TYN L++G CK   +  + +L +EM  +G  P V
Sbjct: 366 MSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNV 425

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +TY  L +GL +   +E A  +  EM    +   +  YN  I  LC+   +  A  L   
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C+  +  Y+ LI GLCK+ +++ A+ LF ++   G + N VTYN +IH     G 
Sbjct: 486 MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGA 545

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             KA  L  DM  +G   + +T+N L+    +     K +EL  +M
Sbjct: 546 FQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 102/203 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RL   M+  G   N   Y+TLI      G   +A  L   M   GC  + +TYN 
Sbjct: 511 IDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNG 570

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +CK  ++E+ L LY +M+  G+    ++ N + +GL ++ +V++A +   +  +  
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN+ ++GLCK G I EA  LF  L+V         Y+  I   CK G +  A 
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDAC 690

Query: 181 ELFQSLPRVGLMPNVVTYNIMIH 203
             F      G +P+ +T+N++++
Sbjct: 691 LFFYRGIENGFVPSNLTWNVLVY 713



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++   L + MI  G+  +    + +I+G C  G++D A E        G + ++VTYN+
Sbjct: 581 IEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNS 640

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG CK   ++E+LNL+  +  +G+RP   TYNT      +   V  A   F     + 
Sbjct: 641 VLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENG 700

Query: 121 VAAETSTYNTFIDGLCK 137
                 T+N  +  L K
Sbjct: 701 FVPSNLTWNVLVYTLLK 717



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 56/116 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A   L   I RG  P+   Y+++++G C  G I  A  LF  + + G   +  TYNT
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNT 675

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            I+  CK   V ++   +   +  G  P+ +T+N L + L +    E+   + DE+
Sbjct: 676 FISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 1/175 (0%)

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG   T   Y    + L  I + +   KL  +M+   +    S +   +    K G   
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 143 EAAELFRTLR-VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
           +A  L   +R V  CE   ++Y  +++ L      + A  +F  +   G+ P V T+ I+
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   C   ++D A  L  DM   G  PN + + TL+    + N+ S+ ++LL  M
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279


>gi|255660956|gb|ACU25647.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 376

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G  D++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ +L + + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L     + G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 125/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 132/253 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNTL
Sbjct: 111 DKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTL 170

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    +
Sbjct: 171 INGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGL 230

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A  
Sbjct: 231 DPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALS 290

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G  
Sbjct: 291 LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLC 350

Query: 242 RNNETSKVVELLH 254
             N  S  +  LH
Sbjct: 351 SCNRISDAILFLH 363



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 130/264 (49%), Gaps = 36/264 (13%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V  N ++NGY +   +++   L+  M S+G R +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVCNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY------IVEA 144
            ++N +  GLF+  +V+  + +++ M+ S    ++ TY   + G CKNGY      ++E 
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLEM 119

Query: 145 AE-----------------------LFRTLRVLK------CELGIEAYSCLIDGLCKIGK 175
           AE                       L R L VL       C+  +  Y+ LI+GL    K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            E A  +F+ +  +   P ++TYN +I+G C +    +A++L  ++  KG+ P  +T++ 
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSM 239

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           LM G   +++  + ++L +++  +
Sbjct: 240 LMKGLCLDHKVERALQLWNQVTSK 263


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  RL   M   GV+P+ + YS LI+G C   ++D A ELF  M   G + N VT+ T
Sbjct: 187 LDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L +EM    
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK+G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 130/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           +  + D + + G+RP+   ++TL++G+   G++D+   L  +M  +G   +V TY+ LIN
Sbjct: 155 SQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++E+  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A  L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + +    +  + V Y  +I G C +G+   A  +  +M + G+ P+  T+  ++
Sbjct: 335 KRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMII 388



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 127/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GEI  ++ +F ++   G   +VV++NTL+NGY +  D+++ 
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L S M + G++P V TY+ L +GL +  +++ A +LF EM    +     T+ T IDG
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   GL P+
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C DG ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  S +++  +   G+RP+VV++NTL +G      ++   +L   M 
Sbjct: 139 FNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + EA ELF  +           ++ LIDG CK GK++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A +L  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  ++ +     E   RM E N
Sbjct: 319 DGSCKDGDLETAFEYRKRMIEEN 341



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 127/257 (49%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS +   +++ +G  R + +V+S LI  +  +G +  A E +     +       T  
Sbjct: 46  DSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++    K K  +     Y E+L  G   ++  +N L H   +  ++  +  +FD ++  
Sbjct: 106 KVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT ++G  + G + +   L   +     +  +  YS LI+GLCK  K++ A
Sbjct: 166 GLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ELF  +   GL+PN VT+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G
Sbjct: 226 NELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  +   L++ M
Sbjct: 286 LCKKGDLKQARNLINEM 302


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 132/254 (51%), Gaps = 9/254 (3%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L D ++   V+P+ ++YS ++   C   + ++A+E+   M+ N C  ++V YN LI+G C
Sbjct: 118 LFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLC 177

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K++ + E+L + + ++ KG+   VVTY   F+          A  LF EM    + A   
Sbjct: 178 KSRRIWEALEIKNCLMQKGLEANVVTYYGKFN---------EAELLFKEMGEKGLCANHI 228

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY+  ID  C+ G +  A      +     E  +  Y+ LI+G CK+G    A   F  +
Sbjct: 229 TYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEM 288

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              GL P VVTY  +I G+CN+G+  KA  ++ +M AKG++PN  TF  ++ G  R N  
Sbjct: 289 IDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMM 348

Query: 247 SKVVELLHRMDERN 260
           ++ + L   M ER 
Sbjct: 349 AEAIRLFGEMKERK 362



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A   LD M +  +    + Y++LI+G+C  G    A+  F  M   G    VVTY +
Sbjct: 243 MDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTS 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC   +  ++  +Y+EM +KGI P   T+  +  GL   + +  A++LF EM+   
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I+G C++G I EA  L   +           Y  LI GLC +G++  A 
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAK 422

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    L +     N + Y+ ++HG+C +G+   A      M  +GVA + V +  L+ G 
Sbjct: 423 EFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGT 482

Query: 241 IRNNETSKVVELLHRM 256
            R ++T  +  LL  M
Sbjct: 483 AREHDTRALFGLLKEM 498



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 123/258 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  L   M ++G+  N   YS LID FC  GE+D A      M        V  YN+L
Sbjct: 209 NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSL 268

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           INGYCK  +   +   + EM+ KG+ PTVVTY +L  G     +   A K+++EM    +
Sbjct: 269 INGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGI 328

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +  T T+   I GLC+   + EA  LF  ++  K       Y+ +I+G C+ G +  A+ 
Sbjct: 329 SPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFH 388

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G +P+  TY  +I G C+ G++ +A +   D+       N + ++ L+ G  
Sbjct: 389 LLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYC 448

Query: 242 RNNETSKVVELLHRMDER 259
           +       V     M ER
Sbjct: 449 KEGRFKDAVSACRVMVER 466



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 123/289 (42%), Gaps = 35/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++ + M  +G+ PN + ++ +I G C    +  A  LF  M     M + VTYN +I
Sbjct: 315 KAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMI 374

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C++ ++ E+ +L  EM+ KG  P   TY  L  GL  + +V  A +  D++      
Sbjct: 375 EGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHK 434

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC----------- 171
                Y+  + G CK G   +A    R +      + +  Y+ LIDG             
Sbjct: 435 LNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGL 494

Query: 172 ------------------------KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                                   K G L+ A+ L+  +   G +PNVVTY  +I+G C 
Sbjct: 495 LKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCK 554

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G MDKA  L  +     V PN +T+   +    R     K V+L H M
Sbjct: 555 AGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM 603



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    D MI +G+ P    Y++LI G+C  GE  +A +++  M   G   N  T+  +I+
Sbjct: 281 AKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIIS 340

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C+   + E++ L+ EM  + I P+ VTYN +  G      +  A  L DEM       
Sbjct: 341 GLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVP 400

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T TY   I GLC  G + EA E    L     +L    YS L+ G CK G+ + A    
Sbjct: 401 DTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSAC 460

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + +   G+  ++V Y I+I G   +        L  +M   G+ P+ V +  ++
Sbjct: 461 RVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMI 514



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 12/256 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + + ++Q+G+  N   Y          G+ + A  LF  M   G   N +TY+ LI
Sbjct: 184 EALEIKNCLMQKGLEANVVTY---------YGKFNEAELLFKEMGEKGLCANHITYSILI 234

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +C+  +++ ++    +M    I  TV  YN+L +G  ++     A   FDEM    + 
Sbjct: 235 DSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLT 294

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY + I G C  G   +A +++  +           ++ +I GLC+   +  A  L
Sbjct: 295 PTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRL 354

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI- 241
           F  +    +MP+ VTYN+MI G C  G + +A  L  +M  KG  P+  T+  L+ G   
Sbjct: 355 FGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCS 414

Query: 242 --RNNETSKVVELLHR 255
             R +E  + V+ LH+
Sbjct: 415 VGRVSEAKEFVDDLHK 430



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 126/251 (50%), Gaps = 3/251 (1%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           +M++RGV  +   Y+ LIDG     +      L   M  +G   + V Y  +I+ + K  
Sbjct: 462 VMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAG 521

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           +++E+  L+  M+ +G  P VVTY  L +GL +   ++ A  L  E   SDV     TY 
Sbjct: 522 NLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYG 581

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIGKLETAWELFQSLPR 188
            F+D L + G + +A +L   +  LK  L    +Y+ LI G C++GK+E A +L   +  
Sbjct: 582 CFLDHLTRGGNMEKAVQLHHAM--LKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTD 639

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             ++P+ +TY+ +I+  C    + +A  L+  M  KG+ P+ + ++ L+ GC    E  K
Sbjct: 640 NDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEK 699

Query: 249 VVELLHRMDER 259
             EL   M  R
Sbjct: 700 AFELRDEMIRR 710



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 114/226 (50%), Gaps = 1/226 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M   G+RP+A +Y+ +ID     G +  A  L+  M   GC+ NVVTY  LING C
Sbjct: 494 LLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLC 553

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   ++++  L  E L   + P  +TY      L     +E A++L   M    +A  T 
Sbjct: 554 KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLAT-TV 612

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YN  I G C+ G I EA +L   +           YS +I   CK   L+ A +L+ ++
Sbjct: 613 SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTM 672

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
              GL P+ + Y+ ++HG C  G+++KA +L  +M  +G+  N VT
Sbjct: 673 LDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 36/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LLD M+ +G  P+ + Y  LI G C  G +  A+E    +  +    N + Y+ 
Sbjct: 383 ISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSA 442

Query: 61  LINGYCK-----------------------------------TKDVEESLNLYSEMLSKG 85
           L++GYCK                                     D      L  EM + G
Sbjct: 443 LVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           +RP  V Y  +     +   ++ A  L+D M          TY   I+GLCK G + +A 
Sbjct: 503 LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE 562

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L +   V         Y C +D L + G +E A +L  ++ + G +   V+YNI+I GF
Sbjct: 563 LLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGF 621

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C  G++++A  L   M    + P+ +T++T++    + +   + ++L H M
Sbjct: 622 CRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTM 672



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 9/183 (4%)

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           SLN    M    + P V T + L +GL    +    L LFD++  ++V  +   Y+  + 
Sbjct: 80  SLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVR 139

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LC+     +A E+   +   +C+L I  Y+ LI GLCK  ++  A E+   L + GL  
Sbjct: 140 SLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEA 199

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NVVTY          G+ ++A  LF +M  KG+  N +T++ L+    R  E    +  L
Sbjct: 200 NVVTYY---------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFL 250

Query: 254 HRM 256
            +M
Sbjct: 251 DKM 253



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 1/116 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A +L   M+ +G       Y+ LI GFC  G+I+ A +L   M  N  + + +TY+T
Sbjct: 593 MEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYST 651

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           +I   CK  +++E++ L+  ML KG++P  + Y+ L HG     ++E A +L DEM
Sbjct: 652 IIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEM 707



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA++LL  M    + P+   YST+I   C    +  A +L+ +M   G   + + Y+ 
Sbjct: 627 IEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSF 686

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
           L++G C   ++E++  L  EM+ +G+R   VT
Sbjct: 687 LVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 140/258 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+ D++I+ G + +  ++++LIDG+CL G++  A  +  +M   G   ++VTY TL+
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   +++ L L+ E+L KG++PT  TY  +  GLF   +   A ++F EM  S +A
Sbjct: 569 NGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIA 628

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  + GLC+N    EA  +F+ L  +  +  I   + +I  + K  + E A  L
Sbjct: 629 VTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGL 688

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+P  GL+P V TY IM+     +G +++A  +F  M   G++P     N ++   + 
Sbjct: 689 FASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLE 748

Query: 243 NNETSKVVELLHRMDERN 260
             E  K    + R+D ++
Sbjct: 749 KGEIVKAGIYMCRVDGKS 766



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 137/277 (49%), Gaps = 35/277 (12%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  VYST++ G    G++  A +LF  M   G   NVVTYN++I+  CK + V+++  + 
Sbjct: 210 NVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGIL 269

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M+  G++P  VTYNTL HG   + Q + A+++F EM    V   T T +TF+  LCK+
Sbjct: 270 RQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKH 329

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYS----------CLID-------------------- 168
           G I EA E F ++     +L I +YS          CL+D                    
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389

Query: 169 -----GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
                G  K G +  A  +F+ + + GL P+V+TY  +IH FC  G MD A D F  M  
Sbjct: 390 NILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID 449

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           KGV PN   +  L+ G   + +  K  EL++ +  + 
Sbjct: 450 KGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG 486



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA    D M+ +G + N   YSTL+ G+   G +     LF  M  +G + N   +N 
Sbjct: 332 IEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNI 391

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGY K   V E++ ++ +M  +G+ P V+TY  + H    +  ++ A+  F+ M    
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-------VLK--------CELG------ 159
           V    + Y   I G C +G +V+A EL   +R       +L         C+ G      
Sbjct: 452 VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQ 511

Query: 160 --------------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                         +  ++ LIDG C IGK+  A+ +  ++  VG+ P++VTY  +++G 
Sbjct: 512 RIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGC 571

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C +G++D    LF ++  KGV P   T+  ++ G      T+   E+   M E
Sbjct: 572 CKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIE 624



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + + M +RG+ P+   Y  +I  FC  G +D A + F  M   G   N   Y  LI
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLI 463

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C   D+ ++  L  E+ +KG+ P ++++ +L + L +  +V  A ++FD +  +   
Sbjct: 464 QGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEK 523

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+ + + + IDG C  G + EA  +   +  +  E  I  Y  L++G CK G+++    L
Sbjct: 524 ADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLIL 583

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ L   G+ P   TY I++ G  + G+   A ++F +M   G+A    T++ L+ G  R
Sbjct: 584 FRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCR 643

Query: 243 NNETSKVVELLHRM 256
           NN T + + +  ++
Sbjct: 644 NNCTEEAITVFQKL 657



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L  M+  GV+P+   Y+TLI G+   G+  +A  +F  M   G + N VT +T
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCST 321

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +   CK   +EE+   +  ML+KG +  +++Y+TL HG      +     LF+ M    
Sbjct: 322 FVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDG 381

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      +N  ++G  K G + EA  +F  ++       +  Y  +I   C++G ++ A 
Sbjct: 382 IVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAM 441

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F  +   G+ PN   Y  +I GFC  G + KA +L  ++  KG+ P  ++F +L+   
Sbjct: 442 DKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHL 501

Query: 241 IRNN---ETSKVVELLHRMDER 259
            +     E  ++ +++ R  E+
Sbjct: 502 CKEGRVFEAQRIFDMIIRTGEK 523



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 118/237 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A    + MI +GV PN  VY  LI GFC  G++ +A EL   +   G    ++++ +
Sbjct: 437 MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS 496

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   V E+  ++  ++  G +  V  + +L  G   I ++  A ++ D M    
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T ++G CKNG I +   LFR L     +     Y  ++DGL   G+   A 
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E+FQ +   G+   + TY+I++ G C +   ++A  +F  + A  V  + V  N ++
Sbjct: 617 EMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMI 673



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 3/242 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN- 76
           P  + YS LID  C    +D A   F  +   G   +V+  ++L+ G C  K  +E+++ 
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--QHSDVAAETSTYNTFIDG 134
           L+  M   G  P  ++Y+T+   + +  + + AL +      Q          Y+T + G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L K G + EA +LF  +        +  Y+ +I  LCK   ++ A  + + +   G+ P+
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            VTYN +IHG+   GQ  +A  +F +M ++GV PN VT +T +    ++    +  E   
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 255 RM 256
            M
Sbjct: 341 SM 342



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 3/212 (1%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           +  V TY+ LI+  C+ + ++ +   +  +L +G++  V+  ++L  GL +  + + A+ 
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 112 -LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLID 168
            LF  M       +  +Y+T +  +C +G    A ++ R    +   C   +  YS ++ 
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GL K GK+  A +LF  + + G+ PNVVTYN +IH  C    +DKA  +   M   GV P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + VT+NTL+ G     +  + V +   M  R 
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRG 311



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 73/151 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+   L   ++ +GV+P  F Y  ++DG    G    A+E+F  M  +G    + TY+ 
Sbjct: 577 IDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSI 636

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+    EE++ ++ ++ +  ++  +V  N +   +F+  + E A  LF  +    
Sbjct: 637 LLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYG 696

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           +     TY   ++ L K G + EA  +F  +
Sbjct: 697 LVPTVQTYTIMMENLIKEGSVEEAEGVFSVM 727



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
           PRV L P V TY+I+I   C   ++D A   F  +  +G+  + +  ++L+ G      T
Sbjct: 96  PRVAL-PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRT 154

Query: 247 SKVVELL-HRMDE 258
            + V++L HRM E
Sbjct: 155 DEAVDVLFHRMPE 167


>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 376

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +       G + +   Y+ 
Sbjct: 75  VDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P    YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L       G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 133/254 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  N   YNT
Sbjct: 110 IDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  + +A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+   +++  V P+A VY+ +++G+    +I    EL+  M   G   +V ++N 
Sbjct: 6   IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNI 64

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      V+E ++++  M   G     +TY  L HG  +   ++ +L + +  Q   
Sbjct: 65  MMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKG 124

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  I+GLCK   +  A  +   +    C+     Y+ LI+GL    K E A 
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAI 184

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +  +   P ++TYN +I+G C +    +A++L  ++  KG+ P  +T++ LM G 
Sbjct: 185 RVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGL 244

Query: 241 IRNNETSKVVELLHRMDER 259
             +++  K ++L +++  +
Sbjct: 245 CLDHKVEKALQLWNQVTSK 263



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 118/229 (51%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M S+G R +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ S    ++ TY   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
            +     L   AYS +I+GLCK   L+ A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + A  +F +M     +P  +T+NTL+ G  +N    +   L+  + ++
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDK 228


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 130/244 (53%), Gaps = 8/244 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A R+   M  RG  P+++ Y TLI+G C  G+I  A+ELF  M+   C   VVTY +
Sbjct: 172 MDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTS 231

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C++KD++ ++ L  EM SKGI+P V TY++L  G  +      AL+L D M    
Sbjct: 232 LIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+T + GLCK G + EA E+   +++         Y  +I G C I K   A 
Sbjct: 292 HLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAA 351

Query: 181 ELFQSLPRVGLMPNVVTY-------NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
                +   G+ PN +T+       NI++ G C +   ++A  L+L M  +G++ +  TF
Sbjct: 352 NFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE-HPNRAFQLYLSMRTRGISIDAKTF 410

Query: 234 NTLM 237
           ++L+
Sbjct: 411 DSLV 414



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 1/232 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCL-TGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           A R    M + G+ P+    + LI   C  +G +D A  +F  M   GC  +  TY TLI
Sbjct: 139 ALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLI 198

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+   + E+  L+ EM +K   PTVVTY +L HGL +   ++ A++L +EM    + 
Sbjct: 199 NGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIK 258

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY++ +DG CK+G    A EL   +   +    +  YS L+ GLCK GKL+ A E+
Sbjct: 259 PNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEI 318

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
              +   GL P+   Y  +I GFC+  +  +A +   +M   G++PN +T++
Sbjct: 319 LDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWS 370



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 1/247 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G R +   +S +I           A EL   M    C      + ++   Y +     ++
Sbjct: 45  GFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDA 104

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + ++ +M      P+  +Y T+F  L   +Q++ AL+ +  M+   +    ++ N  I  
Sbjct: 105 VRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKA 164

Query: 135 LCKNGYIVEAA-ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           LCKN   ++AA  +FR +    C      Y  LI+GLC++GK+  A ELF+ +      P
Sbjct: 165 LCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSP 224

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            VVTY  +IHG C    +D A  L  +M +KG+ PN  T+++LM G  ++  +S+ +ELL
Sbjct: 225 TVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELL 284

Query: 254 HRMDERN 260
             M  R 
Sbjct: 285 DMMVSRR 291



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 8/117 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYS-------TLIDGFCLTGEIDRARELFVSMDINGCMHNV 55
           EA+  LD M+  G+ PN   +S        ++ G C T   +RA +L++SM   G   + 
Sbjct: 349 EAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDA 407

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            T+++L+N +C   D+ ++ +L  EM+  G  P  VT+N +    ++  +V  + +L
Sbjct: 408 KTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAEL 464



 Score = 43.9 bits (102), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 42/76 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A +L   M  RG+  +A  + +L++ FC  G++ +A  L   M ++GC+ + VT+N +
Sbjct: 389 NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAV 448

Query: 62  INGYCKTKDVEESLNL 77
           +  +   + V ES  L
Sbjct: 449 VCAFWDRRKVRESAEL 464


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+  M    V P+A+ Y+TLI G C  G    A  +   M    C+ +VVTY  
Sbjct: 16  LDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTI 72

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK    ++++ L  EM  KG  P +VTYN + +G+ +  +V+ A++    +    
Sbjct: 73  LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 132

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T +YN  + GLC      +A EL   +    C   +  ++ LI  LC+ G +E A 
Sbjct: 133 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 192

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ + +P+ G  PN ++YN ++H FC   +MDKA      M ++G  P+ V++NTL+   
Sbjct: 193 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 252

Query: 241 IRNNETSKVVELLHRMDERN 260
            R+ E    VELLH++ ++ 
Sbjct: 253 CRSGEVDVAVELLHQLKDKG 272



 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   L  +   G  PN   Y+ ++ G C     + A EL   M   GC  NVVT+N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C+   VE +L +  ++   G  P  ++YN L H   +  +++ A+   D M    
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YNT +  LC++G +  A EL   L+   C   + +Y+ +IDGL K GK + A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL P+++TY+ +  G C + +++ A   F  ++  G+ PN V +N ++LG 
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 241 IRNNETSKVVELLHRM 256
            +  ET   ++L   M
Sbjct: 358 CKRRETHSAIDLFAYM 373



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 129/258 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L+  M Q+G  PN   ++ LI   C  G ++ A E+   +   GC  N ++YN L
Sbjct: 154 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 213

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK K +++++     M+S+G  P +V+YNTL   L    +V+ A++L  +++    
Sbjct: 214 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 273

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    +YNT IDGL K G   EA EL   +     +  I  YS +  GLC+  ++E A  
Sbjct: 274 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  +  +G+ PN V YN +I G C   +   A DLF  M   G  PN  T+  L+ G  
Sbjct: 334 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 393

Query: 242 RNNETSKVVELLHRMDER 259
                 +  +LL  +  R
Sbjct: 394 YEGLIKEARDLLDELCSR 411



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 126/253 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +LD M++R   P+   Y+ L++  C      +A +L   M   GC  ++VTYN ++N
Sbjct: 51  ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 110

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C+   V++++     + S G  P  V+YN +  GL    + E A +L  EM       
Sbjct: 111 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 170

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              T+N  I  LC+ G +  A E+   +    C     +Y+ L+   CK  K++ A    
Sbjct: 171 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 230

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G  P++V+YN ++   C  G++D A +L   ++ KG AP  +++NT++ G  + 
Sbjct: 231 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 290

Query: 244 NETSKVVELLHRM 256
            +T + +ELL+ M
Sbjct: 291 GKTKEALELLNEM 303



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 117/218 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L+ + + G  PN+  Y+ L+  FC   ++D+A      M   GC  ++V+YNT
Sbjct: 188 VEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 247

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C++ +V+ ++ L  ++  KG  P +++YNT+  GL +  + + AL+L +EM    
Sbjct: 248 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 307

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T   GLC+   I +A   F  ++ +        Y+ +I GLCK  +  +A 
Sbjct: 308 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 367

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
           +LF  +   G MPN  TY I+I G   +G + +A DL 
Sbjct: 368 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 405



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 104/186 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A   LDLM+ RG  P+   Y+TL+   C +GE+D A EL   +   GC   +++YNT
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 282

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K    +E+L L +EM+SKG++P ++TY+T+  GL    ++E A++ F ++Q   
Sbjct: 283 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 342

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T  YN  I GLCK      A +LF  +    C      Y+ LI+GL   G ++ A 
Sbjct: 343 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 402

Query: 181 ELFQSL 186
           +L   L
Sbjct: 403 DLLDEL 408



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 3/203 (1%)

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           + YN ++ GYC    ++ +  L +EM    + P   TYNTL  GL    +  +AL + DE
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M       +  TY   ++  CK     +A +L   +R   C   I  Y+ +++G+C+ G+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A E  ++LP  G  PN V+YNI++ G C   + + A +L  +M  KG  PN VTFN 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 236 LMLGCIRNNETSKVVELLHRMDE 258
           L+    R       +E+L ++ +
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPK 200



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 44/85 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R    +   G+RPN  +Y+ +I G C   E   A +LF  M  NGCM N  TY  
Sbjct: 328 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 387

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG 85
           LI G      ++E+ +L  E+ S+ 
Sbjct: 388 LIEGLAYEGLIKEARDLLDELCSRA 412



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           AY+ ++ G C  G+L+ A  L   +P   + P+  TYN +I G C  G+   A  +  +M
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +   P+ VT+  L+    + +   + ++LL  M ++ 
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 97



 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           + YN M+ G+C  GQ+D A  L  +M    V P+  T+NTL+ G      T+  + +L  
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 256 MDER 259
           M  R
Sbjct: 58  MLRR 61


>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia seriphioides]
          Length = 414

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 131/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A ELF  M + G +   VT+ T
Sbjct: 176 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTT 235

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L  EM    
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKG 295

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 296 XKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 355

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VG  P+  TY ++I+ FC  G +     L  +M+  G  P+ VT+N LM G
Sbjct: 356 KMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV+YNTL  G   +  ++   +L   M 
Sbjct: 128 FNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMH 187

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + EA ELF  + V         ++ LIDG CK G+++
Sbjct: 188 ASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVD 247

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AH L  +M  KG  P+ +T+ TL+
Sbjct: 248 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLI 307

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 308 DGCCKEGDLDTAFEHRKRMIQEN 330



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 129/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G I  A+ +F ++   G   +VV+YNTL++GY +  D
Sbjct: 116 ILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGD 175

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 176 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTT 235

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 236 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKG 295

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 296 XKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 355

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 356 KMLREM 361



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 111/240 (46%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R +  V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 52  RSDIXVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 111

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT + G  
Sbjct: 112 FYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYI 171

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+P  V
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGV 231

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +   L+  M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEM 291


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 130/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE S L D M  +G+ PN   ++ LIDG C  G++D A + F  M   G   ++VTYN 
Sbjct: 228 LDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNA 287

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  D++E+  L +EM + G+RP  +T+ TL  G  +   +E AL++   M    
Sbjct: 288 LINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEG 347

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +   I GLC++G + +A  + R +     +     Y+ ++D  CK G +   +
Sbjct: 348 IELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGF 407

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +   G +P VVTYN +++G C  GQ+  A  L   M   GVAPN +T+N L+ G
Sbjct: 408 KLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEG 466



 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL  +M    V P+ F +S LI+G C  G +D    LF  M   G + N VT+  
Sbjct: 193 VEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTV 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V+ +L  +  ML++G+RP +VTYN L +GL ++  ++ A +L +EM  S 
Sbjct: 253 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+ T IDG CK G +  A E+ R +     EL   A++ LI GLC+ G++  A 
Sbjct: 313 LRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   G  P+  TY +++  FC  G +     L  +M++ G  P  VT+N LM G 
Sbjct: 373 RMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGL 432

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL  M
Sbjct: 433 CKQGQVKNAKMLLDAM 448



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 127/228 (55%), Gaps = 8/228 (3%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           E++R+   ++ +  +G   N   +N L++G+CK   V  +  ++ E+  +G+RPTVV++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           TL  G  +   VE   +L   M+   V  +  T++  I+GLCK G + E + LF  +   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM--- 238

Query: 155 KCELGIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
            C  G+      ++ LIDG CK GK++ A + FQ +   G+ P++VTYN +I+G C  G 
Sbjct: 239 -CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + +A  L  +M A G+ P+ +TF TL+ GC +  +    +E+  RM E
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVE 345



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 123/246 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G  PN F ++ L+ GFC  G +  AR +F  +   G    VV++NTLI+G CK   
Sbjct: 133 VLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGA 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           VEE   L   M S+ + P V T++ L +GL +  +++    LFDEM    +     T+  
Sbjct: 193 VEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTV 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK G +  A + F+ +        +  Y+ LI+GLCK+G L+ A  L   +   G
Sbjct: 253 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +T+  +I G C  G M+ A ++   M  +G+  + V F  L+ G  R+       
Sbjct: 313 LRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAE 372

Query: 251 ELLHRM 256
            +L  M
Sbjct: 373 RMLRDM 378



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 122/237 (51%), Gaps = 1/237 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +RG+RP    ++TLI G C  G ++    L   M+      +V T++ LIN
Sbjct: 161 ARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALIN 220

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++E   L+ EM  KG+ P  VT+  L  G  +  +V+ ALK F  M    V  
Sbjct: 221 GLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRP 280

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  I+GLCK G + EA  L   +           ++ LIDG CK G +E+A E+ 
Sbjct: 281 DLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIK 340

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + +   G+  + V + ++I G C DG++  A  +  DM + G  P+  T+ T+++ C
Sbjct: 341 RRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTY-TMVVDC 396



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 3/175 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  +   M++ G+  +   ++ LI G C  G +  A  +   M   G   +  TY  
Sbjct: 333 MESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTM 392

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++ +CK  +V     L  EM S G  P VVTYN L +GL +  QV++A  L D M +  
Sbjct: 393 VVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVG 452

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           VA    TYN  ++G  K+G  V+  ++F + + L  +    +Y+ L++   K  K
Sbjct: 453 VAPNDITYNILLEGHSKHGSSVD-VDIFNSEKGLVKDYA--SYTALVNESSKTSK 504


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 148/257 (57%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E+  LL  +I RG+RP+A +Y+ ++   C +  +  A EL   M   GC   ++T+NT
Sbjct: 98  VEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNT 157

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+ K++E + +L   M + G++  VVTYNTL  GL +  +++ A +L + M+ S 
Sbjct: 158 LISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASG 217

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   Y++F+ GLCK+G ++ A ++   +R    +  +  Y+ ++DGLCK GK++TA 
Sbjct: 218 CAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTAL 277

Query: 181 ELFQSLPRV-GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+ + +    G   NVV Y+ ++ G C  G+  +A  +   M   G  P+ VT+++L+ G
Sbjct: 278 EMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  + VE +  M
Sbjct: 338 LCKAGKIEEAVEAVREM 354



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 142/295 (48%), Gaps = 41/295 (13%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTYNTLIN 63
           RLL+ M  RG++PN   Y+ L++G C       A EL   M   G     ++VTY+TL++
Sbjct: 31  RLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLS 90

Query: 64  GYCKTKDVEESLNLYSEMLSKGIR-----------------------------------P 88
           GYCK   VEES  L  E++S+G+R                                   P
Sbjct: 91  GYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCP 150

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T++T+NTL  G      +E A  L   M  S V A+  TYNT +DGLCK G + EA +L 
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             ++   C   + AYS  + GLCK GK+  A ++ + +      PNVVTYN ++ G C  
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKS 270

Query: 209 GQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLGCI---RNNETSKVVELLHRMDER 259
           G++D A ++   M +  G   N V ++T++ G     R  E   V+E + R   R
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCR 325



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 134/262 (51%), Gaps = 6/262 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  LL  M   GV+ +   Y+TL+DG C  G +  A +L   M  +GC  +VV Y++
Sbjct: 168 LEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            + G CK+  V  +  +  +M      P VVTYNT+  GL +  +++ AL++ ++M  SD
Sbjct: 228 FVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287

Query: 121 -VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                   Y+T +DGLCK G   EA  +   +    C   +  YS L++GLCK GK+E A
Sbjct: 288 GCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-----VAPNCVTFN 234
            E  + +   G  PN VTY  ++HG C+ G++ +A  +  +M + G       P+  T+N
Sbjct: 348 VEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYN 407

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
            L+ G  +       ++   RM
Sbjct: 408 ALIGGLCKAGRIDDALKFFQRM 429



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 6/217 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLI 62
           A ++L+ M      PN   Y+T++DG C +G+ID A E+   M   +GC  NVV Y+T++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK    +E+ ++   M   G RP VVTY++L +GL +  ++E A++   EM      
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-----CELGIEAYSCLIDGLCKIGKLE 177
               TY + + GLC  G + EA  +   +         C   +  Y+ LI GLCK G+++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            A + FQ +   G  P+ V+Y+ ++ G    G+  +A
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 6/181 (3%)

Query: 1   MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +D A  +++ M    G   N   YST++DG C  G    AR +  +M   GC  +VVTY+
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +L+NG CK   +EE++    EM  +G +P  VTY +L HGL    ++  A ++ +EM   
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392

Query: 120 DVAAE-----TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
               +      STYN  I GLCK G I +A + F+ +R   C+    +YS +++GL + G
Sbjct: 393 GGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452

Query: 175 K 175
           +
Sbjct: 453 R 453



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 109/213 (51%), Gaps = 2/213 (0%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           MD  GC  N VT+N L+NG+ K     +   L   M ++GI+P VV+YN L  GL ++ +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 106 VEHALKLFDEM--QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
              A +L  +M  +      +  TY+T + G CK G + E+ EL + +           Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + ++  LCK  +L  A EL + + R G  P ++T+N +I G C +  ++ A  L   M A
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            GV  + VT+NTLM G  +     +  +LL RM
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 5/147 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +++ M + G RP+   YS+L++G C  G+I+ A E    M + GC  N VTY +L+
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIR-----PTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +G C    + E+  +  EM S G       P+V TYN L  GL +  +++ ALK F  M+
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMR 430

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEA 144
                 +  +Y+T ++GL ++G  ++A
Sbjct: 431 SQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 2/100 (2%)

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           ++ L++G  K G+      L +++   G+ PNVV+YN ++ G C   +  +A +L  DM 
Sbjct: 13  FNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72

Query: 223 AKG--VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++G    P+ VT++TL+ G  +  +  +  ELL  +  R 
Sbjct: 73  SRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRG 112



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%)

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           R G  PN VT+N +++GF   G+      L   M A+G+ PN V++N L+ G  +     
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62

Query: 248 KVVELLHRMDERN 260
           +  EL+  M  R 
Sbjct: 63  EAEELVRDMISRG 75


>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           javanica]
          Length = 431

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 128/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G      +D   ELF  M   G + N VT+ T
Sbjct: 193 LDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTT 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P  +TYNTL +GL +   +  A  L DEM    
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAE 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + +  VGL P+  TY ++I+ FC  G + K      +M+  G  P  VT+N LM G
Sbjct: 373 KMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXVVTYNVLMNG 431



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 1/257 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP    Y+TL++G+   G +D    L  +M  +G   +V TY+ LIN
Sbjct: 161 AQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLIN 220

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G  K   +++   L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    +  
Sbjct: 221 GLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXP 280

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT   GLCK G + +A  L   + +   +     Y+ LIDG CK G L+ A+E  
Sbjct: 281 DFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHR 340

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P+  T+  ++    + 
Sbjct: 341 KRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKK 400

Query: 244 NETSKVVELLHRMDERN 260
            +  K  + L  M +RN
Sbjct: 401 GDVWKGXKXLKEM-QRN 416



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 123/246 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G    V +YNTL+NGY +   
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGX 192

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G++P V TY+ L +GL +   ++   +LFDEM    +   + T+ T
Sbjct: 193 LDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTT 252

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +           Y+ L  GLCK G L  A  L   +   G
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKG 312

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 313 LKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAE 372

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 373 KMLREM 378



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 18/253 (7%)

Query: 17  RPNAFVYSTLIDGFCLTG---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           R + +V+S LI  +  +G          + R  +L+V  D         T   ++    K
Sbjct: 69  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD---------TCRKVLEHLMK 119

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            +  +     Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +
Sbjct: 120 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXS 179

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YNT ++G  + G + E   L   +     +  +  YS LI+GL K   ++   ELF  + 
Sbjct: 180 YNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEML 239

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             GL+PN VT+  +I G C +G++D A +++  M ++ + P+ +T+NTL  G  +  + +
Sbjct: 240 XKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLN 299

Query: 248 KVVELLHRMDERN 260
           +   L+  M  + 
Sbjct: 300 QAHGLIDEMSMKG 312


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            AS + D  +  G+ PN   Y  LI+GFC  G+++ A  L   M   G  HN + +NT+I
Sbjct: 255 RASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMI 314

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   V+ +L + + M   GI   V TYNTL  GL  ++++  A  L   M    V 
Sbjct: 315 DGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVP 374

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY T I   CK G +VEA  LFR +        +  Y+ ++DG  K G +  A   
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + GL+P+V TY  ++HG C +G++D A  LF +M+ +G  PN V +  L+ G  +
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAK 494

Query: 243 NNETSKVVELLHRM 256
              + +  +L   M
Sbjct: 495 EGRSEEAFQLYDDM 508



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 121/254 (47%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL++M   G+      Y+ L+D     G+I +   +   M       +V  Y  +IN YC
Sbjct: 189 LLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYC 248

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  +V  +  ++ E +  GI P   TY  L +G  +I Q+E A  L  +MQ   V     
Sbjct: 249 RAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQI 308

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            +NT IDG C+ G +  A ++   +  +  EL +  Y+ L  GLC++ ++  A  L   +
Sbjct: 309 IFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIM 368

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ PN VTY  +I   C +G M +A  LF +M  KG  P+ VT+N +M G I+    
Sbjct: 369 IEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSI 428

Query: 247 SKVVELLHRMDERN 260
            +       M+++ 
Sbjct: 429 REAERFRKEMEKKG 442



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 120/237 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  LL  M  RGV  N  +++T+IDG+C  G +D A ++  +M+  G   +V TYNT
Sbjct: 288 MEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNT 347

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G C+   + E+  L   M+ KG+ P  VTY TL     +   +  A +LF EM    
Sbjct: 348 LACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKG 407

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  +DG  K G I EA    + +        +  Y+ L+ G C  GK++ A 
Sbjct: 408 AMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVAL 467

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF+ +   G  PNVV Y  +I G   +G+ ++A  L+ DM   G+ P+   ++ L+
Sbjct: 468 KLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 132/258 (51%), Gaps = 8/258 (3%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           ++D M  + V  + ++Y+ +I+ +C  G + RA E+F     NG   N  TY  LING+C
Sbjct: 224 VVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFC 283

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   +E +  L ++M  +G+    + +NT+  G      V++ALK+   M+   +  +  
Sbjct: 284 KIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVY 343

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWEL 182
           TYNT   GLC+   + EA    +TL  +  E G+      Y+ LI   CK G +  A  L
Sbjct: 344 TYNTLACGLCRVNRMAEA----KTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRL 399

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   G MP+VVTYN+M+ G+   G + +A     +ME KG+ P+  T+ +L+ G   
Sbjct: 400 FREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCV 459

Query: 243 NNETSKVVELLHRMDERN 260
           N +    ++L   M  R 
Sbjct: 460 NGKVDVALKLFEEMKHRG 477



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 109/215 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++   M + G+  + + Y+TL  G C    +  A+ L   M   G   N VTY T
Sbjct: 323 VDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTT 382

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK  D+ E+  L+ EM  KG  P+VVTYN +  G  +   +  A +   EM+   
Sbjct: 383 LISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKG 442

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + + G C NG +  A +LF  ++    E  + AY+ LI GL K G+ E A+
Sbjct: 443 LVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAF 502

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           +L+  + + GL P+   Y+ ++     D + D  H
Sbjct: 503 QLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDIHH 537



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 97/200 (48%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           + +++G+CK+  V+++  L  EM   G+R   + YN+L              +L + M++
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             + A   TY   +D L   G I +   +   ++       +  Y+ +I+  C+ G +  
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A E+F      G+ PN  TY ++I+GFC  GQM+ A  L  DM+ +GV  N + FNT++ 
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315

Query: 239 GCIRNNETSKVVELLHRMDE 258
           G  R       +++   M++
Sbjct: 316 GYCRQGMVDNALKVKAAMEK 335



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 52/117 (44%)

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           AA L R L      +   A S ++DG CK G+++ A  L   +PR G+  N + YN ++ 
Sbjct: 116 AAILTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLD 175

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +       +  +L   ME  G+     T+  L+       + SKV  ++  M  +N
Sbjct: 176 CYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKN 232


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L   M   GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 187 LNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   +  A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +   GL P+  TY ++I+ FC  G + K   L  +M+  G AP+ VT
Sbjct: 367 KMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 116/203 (57%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  +    KL   M 
Sbjct: 139 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G +++AHDL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQEN 341



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 138/253 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   Y+TL++G+   G+++   +L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    +  
Sbjct: 215 GLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G L+TA+E  
Sbjct: 275 DLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P+  T+  ++    + 
Sbjct: 335 KRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKK 394

Query: 244 NETSKVVELLHRM 256
            +  K  +LL  M
Sbjct: 395 GDVWKGSKLLKEM 407



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 130/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 186

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E   L S M + G++P V TY+ L +GL +  +++ A +LF+EM    +     T+ T
Sbjct: 187 LNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTT 246

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L  A +L   +   G
Sbjct: 247 LIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKG 306

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 251 ELLHRM 256
           +++  M
Sbjct: 367 KMMREM 372



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 116/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K       
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWA 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E  +L   +     +  +  YS LI+GLCK  K++ A ELF+ +   GL+PN V
Sbjct: 183 RLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +    ++  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEM 302


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 135/244 (55%), Gaps = 1/244 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  +   M+++G+ PN F YS LIDGF    +   A ++   M+ +    N V YNT
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNT 559

Query: 61  LINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +ING CK     ++  +   ++  K    +  +YN++  G  ++   + A++ + EM  +
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             +    T+ + I+G CK+  +  A E+   ++ ++ +L + AY  LIDG CK   ++TA
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + LF  LP +GLMPNV  YN +I GF N G+MD A DL+  M   G++ +  T+ T++ G
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739

Query: 240 CIRN 243
            +++
Sbjct: 740 LLKD 743



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 124/230 (53%), Gaps = 1/230 (0%)

Query: 30  FCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPT 89
           FC  G++D A      M+  G   NVV YN ++  +C+ K+++ + +++SEML KG+ P 
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518

Query: 90  VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
             TY+ L  G F+    ++A  + ++M  S+  A    YNT I+GLCK G   +A E+ +
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578

Query: 150 TL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
            L +  +  +   +Y+ +IDG  K+G  ++A E ++ +   G  PNVVT+  +I+GFC  
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +MD A ++  +M++  +  +   +  L+ G  + N+      L   + E
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 136/263 (51%), Gaps = 8/263 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A      M + G  PN   +++LI+GFC +  +D A E+   M       ++  Y  L
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK  D++ +  L+SE+   G+ P V  YN+L  G   + +++ A+ L+ +M +  +
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLE 177
           + +  TY T IDGL K+G I  A++L+  L     +LGI      +  L++GL K G+  
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSEL----LDLGIVPDEILHMVLVNGLSKKGQFL 782

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A ++ + + +  + PNV+ Y+ +I G   +G +++A  L  +M  KG+  +   FN L+
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G +     +  +  L   + R+
Sbjct: 843 SGRVEKPPAASKISSLASPEMRS 865



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA R++D M+  G+  +    ++L++G+C   E+ +A +LF  M+  G   + V ++ 
Sbjct: 326 MEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++  +CK  ++E+++  Y  M S  I P+ V  +T+  G  +    E AL++F++   S 
Sbjct: 386 MVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESW 445

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A        F+   CK G +  A    + +     E  +  Y+ ++   C++  ++ A 
Sbjct: 446 IAHGFMCNKIFL-LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLAR 504

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   GL PN  TY+I+I GF  +     A D+   M A     N V +NT++ G 
Sbjct: 505 SIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564

Query: 241 IRNNETSKVVELLHRM 256
            +  +TSK  E+L  +
Sbjct: 565 CKVGQTSKAKEMLQNL 580



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A     LM+ R V P     + ++     +  ID A+E++  M + G   + VT   
Sbjct: 185 MDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQL 244

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
           L+    + +  EE++ ++  ++S+G  P  + ++       +   +  AL L  EM+   
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V A   TY + I    K G + EA  +   +      + + A + L++G CK  +L  A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LF  +   GL P+ V +++M+  FC + +M+KA + ++ M++  +AP+ V  +T++ G
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424

Query: 240 CIRNNETSKVVELLH 254
           C++       +E+ +
Sbjct: 425 CLKAESPEAALEIFN 439



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 3/240 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P AF Y  L++ +     +D A + F  M     +  V   N +++   ++  ++E+  +
Sbjct: 169 PRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEI 226

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y++M+  G+    VT   L        + E A+K+F  +       +   ++  +   CK
Sbjct: 227 YNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACK 286

Query: 138 NGYIVEAAELFRTLR-VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
              +V A +L R +R  L      E Y+ +I    K G +E A  +   +   G+  +V+
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVI 346

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
               +++G+C   ++ KA DLF  ME +G+AP+ V F+ ++    +N E  K +E   RM
Sbjct: 347 AATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M  NG + N VT+ T
Sbjct: 187 LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL   + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 129/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GEI  A+ +F ++   G   +VV++NTL+NGY K  D+ E 
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A +LFDEM  + +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G+++    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+     T+  ++
Sbjct: 335 KIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMII 388



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL +G  ++  +    +L + MQ
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E    M + N
Sbjct: 319 DGSCKEGDLETAFEYRKIMIKEN 341



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS +   +++ RG  R + +V+S LI  +  +G +  A E       +       T  
Sbjct: 46  DSASAVFAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++    K K  +     Y E L  G   ++  +N L H   +  ++  A  +FD +   
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT ++G  K G + E   L   ++    +  +  YS LI+GLCK  K++ A
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ELF  +   GL+PN VT+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  +  +L+  M
Sbjct: 286 LCKKGDLKQAQDLIDEM 302


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 133/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA   L  M++ G++PNAF Y   I G+    E   A +    M   G + N V    
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YCK + V E+ + Y  M+ +GI     TY  L +GLF+  +V+ A ++F EM+   
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  +Y   I+G  K G + +A+ +F  +        +  Y+ L+ G C+ G++E A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL PN VTY  +I G+C  G + +A  LF +M+ KG+ P+   + TL+ GC
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 241 IRNNETSKVVELL 253
            R N+  + + + 
Sbjct: 743 CRLNDVERAITIF 755



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 144/266 (54%), Gaps = 9/266 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +AS + D M++ G+ PN  +Y+ L+ GFC +GEI++A+EL   M + G   N VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK+ D+ E+  L+ EM  KG+ P    Y TL  G   ++ VE A+ +F   +   
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG- 761

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIG 174
            A+ T+ +N  I+ + K G      E+   L      R  K       Y+ +ID LCK G
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN--DVTYNIMIDYLCKEG 819

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            LE A ELF  +    LMP V+TY  +++G+   G+  +   +F +  A G+ P+ + ++
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            ++   ++   T+K + L+ +M  +N
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKN 905



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 129/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R+L  M ++G+ P+ F Y++LI G      +D AR   V M  NG   N  TY   I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY +  +   +     EM   G+ P  V    L +   +  +V  A   +  M    + 
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGIL 589

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   ++GL KN  + +A E+FR +R       + +Y  LI+G  K+G ++ A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   GL PNV+ YN+++ GFC  G+++KA +L  +M  KG+ PN VT+ T++ G  +
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 243 NNETSKVVELLHRM 256
           + + ++   L   M
Sbjct: 710 SGDLAEAFRLFDEM 723



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 7/244 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M  +G+ P+ F Y  LI+GF   G + +A  +F  M   G   NV+ YN 
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++ ++E++  L  EM  KG+ P  VTY T+  G  +   +  A +LFDEM+   
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++  Y T +DG C+   +  A  +F T +   C      ++ LI+ + K GK E   
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKT 786

Query: 181 ELFQ-----SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           E+       S  R G  PN VTYNIMI   C +G ++ A +LF  M+   + P  +T+ +
Sbjct: 787 EVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845

Query: 236 LMLG 239
           L+ G
Sbjct: 846 LLNG 849



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 37/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  L D MI  G+ P A  Y++LI+G+C    + +  EL V M     + +  TY T
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G C + D++ + N+  EM++ G RP VV Y TL     +  +   A+++  EM+   
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 121 VAAETSTYNTFIDGLCK------------------------------NGYIVEAAELFRT 150
           +A +   YN+ I GL K                              +GYI EA+E    
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI-EASEFASA 541

Query: 151 LRVLK--CELGIEAYSCLIDGL----CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            + +K   E G+     L  GL    CK  K+  A   ++S+   G++ +  TY ++++G
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
              + ++D A ++F +M  KG+AP+  ++  L+ G  +     K   +   M E
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 124/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L + MI +G+ P  + Y  LIDG C    ++ A+ L V MD  G   +  TY+ 
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K ++ + +  L  EM+S GI      Y+     + +   +E A  LFD M  S 
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y + I+G C+   + +  EL   ++     +    Y  ++ G+C  G L+ A+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   G  PNVV Y  +I  F  + +   A  +  +M+ +G+AP+   +N+L++G 
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497

Query: 241 IRNNETSKVVELLHRMDE 258
            +     +    L  M E
Sbjct: 498 SKAKRMDEARSFLVEMVE 515



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 110/224 (49%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A +L  SM   G +    TY+ LI+G CK K +E++ +L  EM S G+     TY+ 
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L  GL +    + A  L  EM    +  +   Y+  I  + K G + +A  LF  +    
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                +AY+ LI+G C+   +   +EL   + +  ++ +  TY  ++ G C+ G +D A+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++  +M A G  PN V + TL+   ++N+     + +L  M E+
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 45/250 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH------- 53
           + EA RL D M  +G+ P++FVY+TL+DG C   +++RA  +F   +  GC         
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNA 771

Query: 54  --------------------------------NVVTYNTLINGYCKTKDVEESLNLYSEM 81
                                           N VTYN +I+  CK  ++E +  L+ +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            +  + PTV+TY +L +G  ++ +      +FDE   + +  +   Y+  I+   K G  
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891

Query: 142 VEAAELFRTLRVLK-----CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
            +A  L   +         C+L I     L+ G  K+G++E A ++ +++ R+  +P+  
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951

Query: 197 TYNIMIHGFC 206
           T   +I+  C
Sbjct: 952 TVIELINESC 961



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 21/267 (7%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   +  ++  L DG+   G I+ A  +F S      +  +     L++   +   ++  
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHG-------------LFEIHQ--------VEHALKLF 113
            ++Y  M+ + +   V TY+ L                LF+  +        V+ ALKL 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           + M    +     TY+  IDGLCK   + +A  L   +  L   L    YS LIDGL K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
              + A  L   +   G+      Y+  I     +G M+KA  LF  M A G+ P    +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
            +L+ G  R     +  ELL  M +RN
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRN 412


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 129/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M ++   P+ + Y TL+DG C    ID A  L   M   GC  + V YN 
Sbjct: 203 VDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  D+     L   M  KG  P  VTYNTL HGL    +++ A+ L + M  S 
Sbjct: 263 LIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GL K    ++ A L  ++      L    YS LI GL K GK E A 
Sbjct: 323 CIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAM 382

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +   G  PN+V Y+ +I G C +G+ ++A ++   M + G  PN  T+++LM G 
Sbjct: 383 TLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGF 442

Query: 241 IRNNETSKVVELLHRMDE 258
            +   + + +++   MDE
Sbjct: 443 FKTGLSEEAIQVWREMDE 460



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 141/297 (47%), Gaps = 38/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +   ++L+D M  +G  PN   Y+TLI G CL G++D+A  L   M  + C+ N VTY T
Sbjct: 273 LSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332

Query: 61  LINGYCKTK-----------------------------------DVEESLNLYSEMLSKG 85
           LING  K +                                     EE++ L+ +M  KG
Sbjct: 333 LINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKG 392

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            RP +V Y+ +  GL    +   A ++ + M  S       TY++ + G  K G   EA 
Sbjct: 393 CRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAI 452

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +++R +    C      YS LIDGLC +G+++ A  ++  +  +G+ P+ V Y+ MI G 
Sbjct: 453 QVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGL 512

Query: 206 CNDGQMDKAHDLFLDM---EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G MD A  L+ +M   E     P+ VT+N L+ G     + S+ V+LL+ M +R
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDR 569



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 125/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD M   G  P+  +Y+ LIDG C  G++ R  +L  +M + GC  N VTYNT
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNT 297

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++++++L   M+S    P  VTY TL +GL +  +     +L   M+   
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERG 357

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y+  I GL K G   EA  L++ +    C   I  YS +IDGLC+ GK   A 
Sbjct: 358 YRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAK 417

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+   +   G +PNV TY+ ++ GF   G  ++A  ++ +M+  G + N   ++ L+ G
Sbjct: 418 EILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDG 476



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 7/240 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           + +RLL  M +RG R N  +YS LI G    G+ + A  L+  M   GC  N+V Y+ +I
Sbjct: 345 DGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVI 404

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+     E+  + + M+S G  P V TY++L  G F+    E A++++ EM  +  +
Sbjct: 405 DGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCS 464

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                Y+  IDGLC  G + EA  ++  +  +  +    AYS +I GLC IG ++ A +L
Sbjct: 465 RNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKL 524

Query: 183 F-----QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +     Q  P+    P+VVTYNI++ G C    + +A DL   M  +G  P+ +T NT +
Sbjct: 525 YHEMLCQEEPKS--QPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFL 582



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 5/228 (2%)

Query: 37  DRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG----IRPTVV 91
           ++A +LF  M D   C  +V ++N+++N           L  Y  +++      I P  +
Sbjct: 129 EKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           ++N +   L ++  V+ A+++F  M       +  TY T +DGLCK   I EA  L   +
Sbjct: 189 SFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
           +   C      Y+ LIDGLCK G L    +L  ++   G  PN VTYN +IHG C  G++
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL 308

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           DKA  L   M +    PN VT+ TL+ G ++         LL  M+ER
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEER 356



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 98/206 (47%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N +++N +I   CK   V+ ++ ++  M  K   P   TY TL  GL +  +++ A+ L 
Sbjct: 186 NGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           DEMQ    +     YN  IDGLCK G +    +L   + +  C      Y+ LI GLC  
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLK 305

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GKL+ A  L + +     +PN VTY  +I+G     +      L + ME +G   N   +
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIY 365

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           + L+ G  +  +  + + L  +M E+
Sbjct: 366 SVLISGLFKEGKAEEAMTLWKKMAEK 391



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 17/216 (7%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA ++   M + G   N F YS LIDG C  G +  A  ++  M   G   + V Y+++
Sbjct: 449 EEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSM 508

Query: 62  INGYCKTKDVEESLNLYSEMLSK---GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           I G C    ++ +L LY EML +     +P VVTYN L  GL     V  A+ L + M  
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLD 568

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                +  T NTF++ L +                  CE G      L+  L K  ++  
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSD--------------SCEEGRSFLEELVARLLKRQRVSG 614

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           A ++ + +    L P   T+ +++   C   +++ A
Sbjct: 615 ACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAA 650


>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 143/259 (55%), Gaps = 1/259 (0%)

Query: 3   EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA+R L + MI RG+  + F Y+TL+D  C  G++D A E+ + M     + NVVTY+T+
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTM 369

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            +GY K   +E++LNLY+EM   GI    V+YNTL     ++ + E ALK+  EM  S V
Sbjct: 370 ADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV 429

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  +DG  K G   E   +F+ ++  +    +  YS LID   K    E A E
Sbjct: 430 KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+   + GL  +VV Y+ +I+  C +G +D A  L  +M  +G+ PN VT+N+++    
Sbjct: 490 VFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFG 549

Query: 242 RNNETSKVVELLHRMDERN 260
           R+     +V+ +   +ER 
Sbjct: 550 RSTTAEFLVDGVGASNERQ 568



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 128/238 (53%), Gaps = 3/238 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTG--EIDRARELFVSMDINGCMHNVVTYN 59
           DEA ++ + M   G++PN   Y+ +ID  C  G  E  R  E+F  M  NG   + +TYN
Sbjct: 239 DEAIKVFESMKVSGLKPNLVTYNAVIDA-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYN 297

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +L+    +    E + NL++EM+ +GI   V TYNTL   + +  Q++ A ++  EM   
Sbjct: 298 SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK 357

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     TY+T  DG  K G + +A  L+  ++ L   L   +Y+ L+    K+G+ E A
Sbjct: 358 KILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDA 417

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            ++ + +   G+  +VVTYN ++ G+   G+ ++   +F +M+   V PN +T++TL+
Sbjct: 418 LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLI 475



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 131/242 (54%), Gaps = 11/242 (4%)

Query: 3   EASRLLDLMIQRGVRPN--AFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A R  D  + R  R N    + S +I      G+++ A+ +F +    G  + V  ++ 
Sbjct: 168 KAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSA 227

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF----HGLFEIHQVEHALKLFDEM 116
           LI+ Y K+   +E++ ++  M   G++P +VTYN +      G  E  +V   +++F+EM
Sbjct: 228 LISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRV---VEIFEEM 284

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAE-LFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
             + V  +  TYN+ +  +C  G + EAA  LF  +     +  +  Y+ L+D +CK G+
Sbjct: 285 LRNGVQPDRITYNSLL-AVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A+E+   +P   ++PNVVTY+ M  G+   G+++ A +L+ +M+  G+  + V++NT
Sbjct: 344 MDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNT 403

Query: 236 LM 237
           L+
Sbjct: 404 LL 405



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 11/205 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E +R+   M +  V PN   YSTLID +      + A E+F      G   +VV Y+ L
Sbjct: 450 NEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSEL 509

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   V+ ++ L  EM  +GIRP VVTYN++          E    L D +  S+ 
Sbjct: 510 INALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEF---LVDGVGASNE 566

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE--TA 179
               S     I+G+ ++    +   +F+  + L  E    A         ++GK E  + 
Sbjct: 567 RQSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKE------RLGKEEIRSI 620

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHG 204
             +F+ +  + + PNVVT++ +++ 
Sbjct: 621 LSVFKKMHELEIKPNVVTFSAILNA 645



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 36/193 (18%)

Query: 100 LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
           L  + +VE A  +F+             ++  I    K+GY  EA ++F +++V   +  
Sbjct: 197 LGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPN 256

Query: 160 IEAYSCLIDGLCKIG-KLETAWELFQSLPRVGLMPNVV---------------------- 196
           +  Y+ +ID   K G + +   E+F+ + R G+ P+ +                      
Sbjct: 257 LVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLF 316

Query: 197 -------------TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
                        TYN ++   C  GQMD A+++ L+M  K + PN VT++T+  G  + 
Sbjct: 317 NEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKA 376

Query: 244 NETSKVVELLHRM 256
                 + L + M
Sbjct: 377 GRLEDALNLYNEM 389



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG--QMDKAHDLFL 219
           A+S LI    K G  + A ++F+S+   GL PN+VTYN +I   C  G  +  +  ++F 
Sbjct: 224 AFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDA-CGKGGVEFKRVVEIFE 282

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +M   GV P+ +T+N+L+  C R         L + M +R
Sbjct: 283 EMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR 322



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           S +I  L ++GK+E A  +F++    G    V  ++ +I  +   G  D+A  +F  M+ 
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250

Query: 224 KGVAPNCVTFNTLMLGCIRNN-ETSKVVELLHRM 256
            G+ PN VT+N ++  C +   E  +VVE+   M
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 30/207 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGF--CLTGEI---------DRARELFVSMDIN 49
           +D A  LLD M + G+RPN   Y+++ID F    T E          +R  E    M I 
Sbjct: 519 VDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIE 578

Query: 50  GCMHNVVT---------YNTLIN---GYCKTK-----DVEESLNLYSEMLSKGIRPTVVT 92
           G   + +          Y  L++   G  K +     ++   L+++ +M    I+P VVT
Sbjct: 579 GVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVT 638

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           ++ + +       +E A  L +E++  D       +   + G  +N +I +A  LF  ++
Sbjct: 639 FSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLM-GFSENVWI-QAQYLFDEVK 696

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETA 179
            +        Y+ L D L   G+   A
Sbjct: 697 QMDSSTASAFYNALTDMLWHFGQKRGA 723


>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Cucumis sativus]
          Length = 868

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 143/259 (55%), Gaps = 1/259 (0%)

Query: 3   EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA+R L + MI RG+  + F Y+TL+D  C  G++D A E+ + M     + NVVTY+T+
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTM 369

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            +GY K   +E++LNLY+EM   GI    V+YNTL     ++ + E ALK+  EM  S V
Sbjct: 370 ADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV 429

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  +DG  K G   E   +F+ ++  +    +  YS LID   K    E A E
Sbjct: 430 KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F+   + GL  +VV Y+ +I+  C +G +D A  L  +M  +G+ PN VT+N+++    
Sbjct: 490 VFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFG 549

Query: 242 RNNETSKVVELLHRMDERN 260
           R+     +V+ +   +ER 
Sbjct: 550 RSTTAEFLVDGVGASNERQ 568



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 128/238 (53%), Gaps = 3/238 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTG--EIDRARELFVSMDINGCMHNVVTYN 59
           DEA ++ + M   G++PN   Y+ +ID  C  G  E  R  E+F  M  NG   + +TYN
Sbjct: 239 DEAIKVFESMKVSGLKPNLVTYNAVIDA-CGKGGVEFKRVVEIFEEMLRNGVQPDRITYN 297

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +L+    +    E + NL++EM+ +GI   V TYNTL   + +  Q++ A ++  EM   
Sbjct: 298 SLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGK 357

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     TY+T  DG  K G + +A  L+  ++ L   L   +Y+ L+    K+G+ E A
Sbjct: 358 KILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDA 417

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            ++ + +   G+  +VVTYN ++ G+   G+ ++   +F +M+   V PN +T++TL+
Sbjct: 418 LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLI 475



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 131/242 (54%), Gaps = 11/242 (4%)

Query: 3   EASRLLDLMIQRGVRPN--AFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A R  D  + R  R N    + S +I      G+++ A+ +F +    G  + V  ++ 
Sbjct: 168 KAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSA 227

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF----HGLFEIHQVEHALKLFDEM 116
           LI+ Y K+   +E++ ++  M   G++P +VTYN +      G  E  +V   +++F+EM
Sbjct: 228 LISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRV---VEIFEEM 284

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAE-LFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
             + V  +  TYN+ +  +C  G + EAA  LF  +     +  +  Y+ L+D +CK G+
Sbjct: 285 LRNGVQPDRITYNSLL-AVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A+E+   +P   ++PNVVTY+ M  G+   G+++ A +L+ +M+  G+  + V++NT
Sbjct: 344 MDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNT 403

Query: 236 LM 237
           L+
Sbjct: 404 LL 405



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 11/205 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E +R+   M +  V PN   YSTLID +      + A E+F      G   +VV Y+ L
Sbjct: 450 NEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSEL 509

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   V+ ++ L  EM  +GIRP VVTYN++          E    L D +  S+ 
Sbjct: 510 INALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEF---LVDGVGASNE 566

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE--TA 179
               S     I+G+ ++    +   +F+  + L  E    A         ++GK E  + 
Sbjct: 567 RQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKE------RLGKEEIRSI 620

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHG 204
             +F+ +  + + PNVVT++ +++ 
Sbjct: 621 LSVFKKMHELEIKPNVVTFSAILNA 645



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 36/193 (18%)

Query: 100 LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
           L  + +VE A  +F+             ++  I    K+GY  EA ++F +++V   +  
Sbjct: 197 LGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPN 256

Query: 160 IEAYSCLIDGLCKIG-KLETAWELFQSLPRVGLMPNVV---------------------- 196
           +  Y+ +ID   K G + +   E+F+ + R G+ P+ +                      
Sbjct: 257 LVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLF 316

Query: 197 -------------TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
                        TYN ++   C  GQMD A+++ L+M  K + PN VT++T+  G  + 
Sbjct: 317 NEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKA 376

Query: 244 NETSKVVELLHRM 256
                 + L + M
Sbjct: 377 GRLEDALNLYNEM 389



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG--QMDKAHDLFL 219
           A+S LI    K G  + A ++F+S+   GL PN+VTYN +I   C  G  +  +  ++F 
Sbjct: 224 AFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDA-CGKGGVEFKRVVEIFE 282

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +M   GV P+ +T+N+L+  C R         L + M +R
Sbjct: 283 EMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR 322



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           S +I  L ++GK+E A  +F++    G    V  ++ +I  +   G  D+A  +F  M+ 
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250

Query: 224 KGVAPNCVTFNTLMLGCIRNN-ETSKVVELLHRM 256
            G+ PN VT+N ++  C +   E  +VVE+   M
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 30/207 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGF--CLTGEI---------DRARELFVSMDIN 49
           +D A  LLD M + G+RPN   Y+++ID F    T E          +R  E    M I 
Sbjct: 519 VDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFMLIE 578

Query: 50  GCMHNVVT---------YNTLIN---GYCKTK-----DVEESLNLYSEMLSKGIRPTVVT 92
           G   + +          Y  L++   G  K +     ++   L+++ +M    I+P VVT
Sbjct: 579 GVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVT 638

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           ++ + +       +E A  L +E++  D       +   + G  +N +I +A  LF  ++
Sbjct: 639 FSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLM-GFSENVWI-QAQYLFDEVK 696

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETA 179
            +        Y+ L D L   G+   A
Sbjct: 697 QMDSSTASAFYNALTDMLWHFGQKRGA 723


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 1/227 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +  D MIQR V PN   Y++LI+G C+ G +D A+++   M   G   N VTYNTL+
Sbjct: 266 EAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLV 325

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK+K V++++ +   M   G+     TYNTL+ G  +  Q   A K+   M    V 
Sbjct: 326 NGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVL 385

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +DGLC++G I +A      L+  +  +GI  Y+ +I G+CK  K+E AW L
Sbjct: 386 PDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYL 445

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAP 228
           F SL   G+ P+V+TY  M+ G        +AH+L+  M+   G+ P
Sbjct: 446 FCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492



 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 144/257 (56%), Gaps = 4/257 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           ++R+L  M++ G+ P+   +S +ID F   G++  A++ +  M       N+VTYN+LIN
Sbjct: 232 SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C    ++E+  + + M+SKG  P  VTYNTL +G  +  +V+ A+K+   M H  V  
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDG 351

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL--GIEAYSCLIDGLCKIGKLETAWE 181
           +T TYNT   G C+ G    A ++    R++ C +   I  ++ L+DGLC+ GK+E A  
Sbjct: 352 DTFTYNTLYQGYCQAGQFNAAEKVLA--RMVSCGVLPDIYTFNMLLDGLCEHGKIEKALV 409

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             + L +   +  ++TYNI+I G C   +++ A  LF  +  KGV+P+ +T+ T+M+G  
Sbjct: 410 KLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLR 469

Query: 242 RNNETSKVVELLHRMDE 258
           R     +  EL  +M +
Sbjct: 470 RKRLWLEAHELYRKMKK 486



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 128/249 (51%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L  M++ G  P+   + +L++GFC    I  A  L   +   G   NVV YNT+I+  C+
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            + V+ +L++ + M   GIRP V+TYN+L   LF   +   + ++  +M    +  +  T
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           ++  ID   K G ++EA + +  +     +  I  Y+ LI+GLC  G L+ A ++   + 
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMV 310

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G  PN VTYN +++G+C   ++D A  +   M   GV  +  T+NTL  G  +  + +
Sbjct: 311 SKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFN 370

Query: 248 KVVELLHRM 256
              ++L RM
Sbjct: 371 AAEKVLARM 379



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 126/239 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + +STLID FC    +  A      M   G   ++VT+ +L+NG+C    ++E+
Sbjct: 103 GISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEA 162

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L  +++  G  P VV YNT+   L E  QV+ AL + + M+   +  +  TYN+ I  
Sbjct: 163 MSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITR 222

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L  +G    +A +   +  +     +  +S +ID   K G+L  A + +  + +  + PN
Sbjct: 223 LFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPN 282

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VTYN +I+G C  G +D+A  +   M +KG  PN VT+NTL+ G  ++      +++L
Sbjct: 283 IVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKIL 341



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 126/250 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L+D ++  G  PN  +Y+T+ID  C   ++D A ++   M+  G   +V+TYN+
Sbjct: 159 IQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNS 218

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI     +     S  + S+M+  GI P V+T++ +     +  Q+  A K +DEM    
Sbjct: 219 LITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRS 278

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN+ I+GLC +G + EA ++   +           Y+ L++G CK  +++ A 
Sbjct: 279 VDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAM 338

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G+  +  TYN +  G+C  GQ + A  +   M + GV P+  TFN L+ G 
Sbjct: 339 KILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGL 398

Query: 241 IRNNETSKVV 250
             + +  K +
Sbjct: 399 CEHGKIEKAL 408



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 125/239 (52%), Gaps = 3/239 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   +S L+       + +    LF  ++I G  H++ +++TLI+ +C+   +  +L+ 
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +M+  G  P++VT+ +L +G   +++++ A+ L D++           YNT ID LC+
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           N  +  A ++   +  +     +  Y+ LI  L   GK   +  +   + R+G+ P+V+T
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVELL 253
           ++ MI  F  +GQ+ +A   + +M  + V PN VT+N+L+ G CI    +E  KV+  +
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFM 309



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 85/165 (51%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           ++L L+ +M      P++V ++ L   + ++ + E  + LF  ++   ++ +  +++T I
Sbjct: 56  DALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLI 115

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           D  C+   +  A      +  L  E  I  +  L++G C + +++ A  L   +  +G  
Sbjct: 116 DCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYE 175

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           PNVV YN +I   C + Q+D A D+   ME  G+ P+ +T+N+L+
Sbjct: 176 PNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 98/203 (48%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           + + A  LF  M  +  + ++V ++ L+    K K  E  ++L+  +   GI   + +++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           TL        ++  AL    +M          T+ + ++G C    I EA  L   +  L
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             E  +  Y+ +ID LC+  +++TA ++   + ++G+ P+V+TYN +I    + G+   +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 215 HDLFLDMEAKGVAPNCVTFNTLM 237
             +  DM   G+ P+ +TF+ ++
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMI 255



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 14/196 (7%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFE------------IHQVEH--ALKLFDEMQHSDVA 122
           L+  +L KG   T ++ N    G F             +H ++   AL LF +M  S   
Sbjct: 11  LHRHLLEKGNPVTALSLNVCNFGAFSGGSDYRERLRSGLHSIKFNDALTLFCDMAESRPL 70

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                ++  +  + K         LFR + +L     + ++S LID  C+  +L  A   
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + ++G  P++VT+  +++GFC+  ++ +A  L   +   G  PN V +NT++     
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 243 NNETSKVVELLHRMDE 258
           N +    +++L+ M++
Sbjct: 191 NRQVDTALDVLNHMEK 206


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  155 bits (392), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 138/251 (54%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RL + M +RG++P+ + Y+ L+ G C  G++D A +L+     +G + N+ TY  ++ GY
Sbjct: 521 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 580

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK   +E+  NL++E+LSK +    + YN +     +   V  AL+L + M+   +    
Sbjct: 581 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 640

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
           +TY++ I G+C  G + +A  L   +R       +  Y+ LI G CK+G+++TA   +  
Sbjct: 641 ATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLE 700

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +    + PN  TY +MI G+C  G M+KA++L + M+  G+ P+ VT+N L  G  + N+
Sbjct: 701 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 760

Query: 246 TSKVVELLHRM 256
                ++  +M
Sbjct: 761 MDNAFKVCDQM 771



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 123/237 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ L   ++++G   +    + LI G C  G++  A  +   M   G   + +TYN LI
Sbjct: 448 EATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 507

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C    VE    L  EM  +GI+P + TYN L  GL  + +++ A+KL+DE + S + 
Sbjct: 508 LGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLI 567

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           +   TY   ++G CK   I +   LF  L   K EL    Y+ +I   C+ G +  A +L
Sbjct: 568 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQL 627

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++   G++PN  TY+ +IHG CN G ++ A  L  +M  +G  PN V +  L+ G
Sbjct: 628 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EASR++  M++RG+  +   Y+ LI GFC  G+++    L   M   G   ++ TYN 
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C    +++++ L+ E  + G+   + TY  +  G  + +++E    LF+E+    
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 600

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   +  YN  I   C+NG +  A +L   ++          YS LI G+C IG +E A 
Sbjct: 601 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 660

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G +PNVV Y  +I G+C  GQMD A   +L+M +  + PN  T+  ++ G 
Sbjct: 661 HLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGY 720

Query: 241 IRNNETSKVVELLHRMDE 258
            +     K   LL +M E
Sbjct: 721 CKLGNMEKANNLLIKMKE 738



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 118/237 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A R   +M+ R  RP+  + + L+ G C  G+   A EL+  +   G   + VT N LI
Sbjct: 413 SAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALI 472

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C    + E+  +  EML +G+    +TYN L  G     +VE   +L +EM    + 
Sbjct: 473 HGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQ 532

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GLC  G + +A +L+   +       I  Y  +++G CK  ++E    L
Sbjct: 533 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 592

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F  L    +  N + YNI+I   C +G +  A  L  +M++KG+ PNC T+++L+ G
Sbjct: 593 FNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 649



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 126/296 (42%), Gaps = 39/296 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L   M + G+ PN   Y+ +I+G C  G +D A EL   M + G   N+ TY  
Sbjct: 236 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K    ++  ++  EM+  G  P VV +N L  G  ++  +E ALK+ D M   +
Sbjct: 296 LINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--------------- 165
           +   + T  + + G CK+  I  A        +L   L I   +C               
Sbjct: 356 ITPTSVTLYSLMQGFCKSDQIEHAENALE--EILSSGLSIHPDNCYSVVHWLCKKFRYHS 413

Query: 166 ----------------------LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
                                 L+ GLCK GK   A EL+  L   G   + VT N +IH
Sbjct: 414 AFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIH 473

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G C  G++ +A  +  +M  +G+  + +T+N L+LG     +      L   M +R
Sbjct: 474 GLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 529



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 37/295 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF-------VSMDINGCMH 53
           ++ A ++ D+MI + + P +    +L+ GFC + +I+ A           +S+  + C +
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC-Y 399

Query: 54  NVVTY-----------------------------NTLINGYCKTKDVEESLNLYSEMLSK 84
           +VV +                               L+ G CK     E+  L+  +L K
Sbjct: 400 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 459

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G   + VT N L HGL    ++  A ++  EM    +  +  TYN  I G C  G +   
Sbjct: 460 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 519

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             L   +     +  I  Y+ L+ GLC +GKL+ A +L+      GL+ N+ TY IM+ G
Sbjct: 520 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEG 579

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +C   +++   +LF ++ +K +  N + +N ++    +N   +  ++LL  M  +
Sbjct: 580 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 634



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 35/284 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G  P+ F ++ +I+  C  G+++ A ELF+ M+  G   NVVTYN +ING C+   
Sbjct: 211 VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 270

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +  L  +M  KG++P + TY  L +GL +++  +    + DEM  +        +N 
Sbjct: 271 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNN 330

Query: 131 FIDGLCKNGYIVEAAELFRTL---------------------------------RVLKCE 157
            IDG CK G I  A ++   +                                  +L   
Sbjct: 331 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSG 390

Query: 158 LGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           L I   +C  ++  LCK  +  +A+   + +      P+ +   +++ G C DG+  +A 
Sbjct: 391 LSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEAT 450

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +L+  +  KG   + VT N L+ G     +  +   ++  M ER
Sbjct: 451 ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER 494



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 103/205 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++   L + ++ + +  N+ VY+ +I   C  G +  A +L  +M   G + N  TY++
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    VE++ +L  EM  +G  P VV Y  L  G  ++ Q++ A   + EM   +
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 705

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   IDG CK G + +A  L   ++       +  Y+ L +G CK   ++ A+
Sbjct: 706 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 765

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++   +   GL  + +TY  ++HG+
Sbjct: 766 KVCDQMATEGLPVDEITYTTLVHGW 790



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 13/243 (5%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E ++  DL+I         VYST       +  +D    +F  +   G   ++ T N  +
Sbjct: 146 EWTQAFDLLIH--------VYSTQFRNLGFSCAVD----VFYLLARKGTFPSLKTCNFXL 193

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +   K  + E+   ++  ++S+G  P V ++  + + L +  ++E+A++LF +M+   ++
Sbjct: 194 SSLVKANEFEKCCEVF-RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGIS 252

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I+GLC+NG +  A EL   + V   +  ++ Y  LI+GL K+   +    +
Sbjct: 253 PNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHI 312

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  PNVV +N +I G+C  G ++ A  +   M +K + P  VT  +LM G  +
Sbjct: 313 LDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCK 372

Query: 243 NNE 245
           +++
Sbjct: 373 SDQ 375



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 4/228 (1%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYC---KTKDVEESLNLYSEMLSKGIRPTVVT 92
           I+ A  LF    + G       ++ LI+ Y    +      +++++  +  KG  P++ T
Sbjct: 129 IEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKT 188

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
            N     L + ++ E   ++F  M       +  ++   I+ LCK G +  A ELF  + 
Sbjct: 189 CNFXLSSLVKANEFEKCCEVFRVMSEG-ACPDVFSFTNVINALCKGGKMENAIELFMKME 247

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
            L     +  Y+C+I+GLC+ G+L+ A+EL + +   G+ PN+ TY  +I+G       D
Sbjct: 248 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 307

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           K + +  +M   G  PN V FN L+ G  +       +++   M  +N
Sbjct: 308 KVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 355


>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 376

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ MI+ G  PNA VY+TLI+GF    + D A  +F  M    C   VVTYNT
Sbjct: 145 LDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ +L  EML KG +P V+TY+ L  GL + H+VE AL+L++++  + 
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +    N  I GLC  G    A  L+  +    C   +  ++ L++G  K G +  A 
Sbjct: 265 LKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++V+YNI + G C+  ++  A     D  AK +AP+ +T
Sbjct: 325 GIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPSIIT 376



 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + +LM Q G   ++  Y  L+DGFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   ++E++++ + M+  G  P    YNTL +G   + + + A+++F EM  ++
Sbjct: 135 MINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTN 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCK     EA +L + +     +  +  YS L+ GLC+  K+E A 
Sbjct: 195 CSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   GL P+V   NI+IHG C+ G+   A  L+ DM     APN VT NTLM G 
Sbjct: 255 QLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALGIWARI 330



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 126/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++ R+L++  ++G   +AF YS +I+G C   ++D A  +   M  NG   N   YNT
Sbjct: 110 INKSLRVLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+      ++++ ++ EM S    PTVVTYNTL +GL +  +   A  L  EM    
Sbjct: 170 LINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  + GLC+   +  A +L+  +     +  ++  + LI GLC +GK + A 
Sbjct: 230 WKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L+  + R    PN+VT+N ++ GF  DG +  A  ++  +   G+ P+ V++N  + G
Sbjct: 290 MLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKG 348



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 121/229 (52%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  M  +    + V YN ++NG+ +   +++ + L+ E++ +     V
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           V++N +  GLF    V+ A+ +++ M  S    +++TY   +DG CKNGYI ++  +   
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEI 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK  KL+ A  +   + + G  PN   YN +I+GF    +
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            D A  +F +M +   +P  VT+NTL+ G  +    ++  +L+  M E+
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEK 228


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 38/277 (13%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   Y+ ++ G+C+TG++D AR L  +M +     +  TYNTLI G C     + +L +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +ML +G  P VVTY  L     +    + A+KL DEM+    A +  TYN  ++G+C+
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDG---------------------------- 169
            G + +A E  ++L    CE    +Y+ ++ G                            
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294

Query: 170 -------LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
                  LC+ G +E A E+   +P+ G  PN ++YN ++H FC   +MD+A      M 
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 354

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + G  P+ V++NTL+    R  E    VELLH++ ++
Sbjct: 355 SSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 391



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 35/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M  +G  P+   Y+ +++G C  G +D A E   S+   GC  N V+YN ++
Sbjct: 205 QAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVL 264

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE------- 115
            G C  +  E++  L +EM  KG  P VVT+N L   L     VE A+++ D+       
Sbjct: 265 KGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCT 324

Query: 116 ----------------------------MQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                                       M  S    +  +YNT +  LC+ G +  A EL
Sbjct: 325 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVEL 384

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              L+   C   + +Y+ +IDGL K GK E A EL   +   GL P+++TY+ +  G C 
Sbjct: 385 LHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCR 444

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +G++++A   F  ++  G+ PN V +N ++LG  +   T   ++L   M
Sbjct: 445 EGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYM 493



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 128/255 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  +LD M++RG  P+   Y+ L++  C      +A +L   M   GC  ++VTYN +
Sbjct: 169 DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG C+   V++++     + S G  P  V+YN +  GL    + E A KL  EM     
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+N  I  LC+ G +  A E+   +    C     +Y+ ++   CK  K++ A  
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             + +   G  P++V+YN ++   C  G++D A +L   ++ KG  P  +++NT++ G  
Sbjct: 349 FVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 408

Query: 242 RNNETSKVVELLHRM 256
           +  +T + +ELL+ M
Sbjct: 409 KAGKTEEALELLNEM 423



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 131/259 (50%), Gaps = 11/259 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAF-VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           ++EA RL++ M   G+ P+A    + LI   C +G    AR +  S     C  +V++YN
Sbjct: 72  LEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLAS-----CEPDVMSYN 124

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++ GYC T  ++ +  L + M    + P   TYNTL  GL    + ++AL + D+M   
Sbjct: 125 AMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRR 181

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TY   ++  CK     +A +L   +R   C   I  Y+ +++G+C+ G+++ A
Sbjct: 182 GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDA 241

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E  +SLP  G  PN V+YNI++ G C   + + A  L  +M  KG  PN VTFN L+  
Sbjct: 242 MEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISF 301

Query: 240 CIRNNETSKVVELLHRMDE 258
             R       +E+L ++ +
Sbjct: 302 LCRRGLVEPAMEILDQIPK 320



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 123/238 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +L+  M ++G  PN   ++ LI   C  G ++ A E+   +   GC  N ++YN +
Sbjct: 274 EDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPI 333

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK K ++ ++     M+S G  P +V+YNTL   L    +V+ A++L  +++    
Sbjct: 334 LHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 393

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                +YNT IDGL K G   EA EL   +     +  I  YS +  GLC+ G++E A +
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIK 453

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            F  +  +G+ PN V YN ++ G C       A DLF  M + G  PN  T+  L+ G
Sbjct: 454 AFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEG 511



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 124/226 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +LD + + G  PN+  Y+ ++  FC   ++DRA      M  +GC  ++V+YNT
Sbjct: 308 VEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNT 367

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  +V+ ++ L  ++  KG  P +++YNT+  GL +  + E AL+L +EM    
Sbjct: 368 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKG 427

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T   GLC+ G I EA + F  ++ +        Y+ ++ GLCK     +A 
Sbjct: 428 LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAI 487

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +LF  +   G MPN  TY I+I G   +G + +A ++  ++ ++GV
Sbjct: 488 DLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 65/124 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  LL+ M+ +G++P+   YST+  G C  G I+ A + F  +   G   N V YN +
Sbjct: 414 EEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAI 473

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G CK +    +++L++ M+S G  P   TY  L  GL     V+ A ++  E+    V
Sbjct: 474 LLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533

Query: 122 AAET 125
            ++T
Sbjct: 534 VSKT 537


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ ASR+L L++  G  PN   + TLI+GFC  GE+DRA ELF  M+  G   +++ Y+T
Sbjct: 159 IEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYST 218

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K   +     L+S+ L KG++  VV +++      +   +  A  ++  M    
Sbjct: 219 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQG 278

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TY   I GLC++G I EA  ++  +     E  +  YS LIDG CK G L + +
Sbjct: 279 ISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGF 338

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ + ++G  P+VV Y +++ G C  G M  A    +    + + PN V FN+L+ G 
Sbjct: 339 ALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGW 398

Query: 241 IRNNETSKVVELLHRM 256
            R N   + +++   M
Sbjct: 399 CRLNRCDEALKVFRLM 414



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 36/295 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF-------VSMDI----- 48
           MD A  L  +M QRG+ P+   YSTLIDG+   G +    +LF       V +D+     
Sbjct: 194 MDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 253

Query: 49  -----------------------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                   G   NVVTY  LI G C+   + E+  +Y ++L +G
Sbjct: 254 TIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRG 313

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + P+VVTY++L  G  +   +     L+++M       +   Y   +DGLCK G ++ A 
Sbjct: 314 LEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHAL 373

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                         +  ++ LIDG C++ + + A ++F+ +   G+ P+V T   ++   
Sbjct: 374 RFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVT 433

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +G++ +   LF  M   G+ P+ V F TLM    +N + +  ++L   M +RN
Sbjct: 434 VMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLM-QRN 487



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 27/258 (10%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           + + +RPN  V+++LIDG+C     D A ++F  M I G   +V T  TL+        +
Sbjct: 380 LGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRL 439

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E L L+  M   G+ P  V + TL     +  +    L+LFD MQ + + A+ +  N  
Sbjct: 440 KEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVV 499

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+ L K   + EA++ F  L   K E  I  Y+ +I G C + +L+ A  +F+ L     
Sbjct: 500 INLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPF 559

Query: 192 MPNVVTYNIMIH---------------------------GFCNDGQMDKAHDLFLDMEAK 224
            PN VT  I+IH                           G C  G++D+A ++F      
Sbjct: 560 GPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDA 619

Query: 225 GVAPNCVTFNTLMLGCIR 242
            + P+ V +  L+ GC +
Sbjct: 620 KILPDVVAYAILIRGCCK 637



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 3/247 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++RG+ P+   YS+LIDGFC  G +     L+  M   G   +VV Y  L++G CK   
Sbjct: 309 ILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGL 368

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +L    + L + IRP VV +N+L  G   +++ + ALK+F  M    +  + +T  T
Sbjct: 369 MLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITT 428

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +      G + E   LF  +  +  E    A+  L+D  CK  K     +LF  + R  
Sbjct: 429 LMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNK 488

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI---RNNETS 247
           +  ++   N++I+       +++A   F ++    + P+ VT+NT++ G     R +E +
Sbjct: 489 IPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAA 548

Query: 248 KVVELLH 254
           ++ E+L 
Sbjct: 549 RIFEMLK 555



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 8/219 (3%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+ P+A  + TL+D FC   +     +LF  M  N    ++   N +IN   K + 
Sbjct: 449 MFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQS 508

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           VEE+   ++ +L   + P +VTYNT+  G   + +++ A ++F+ ++ +       T   
Sbjct: 509 VEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTI 568

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I  LCKN      +++   LR++   +   +    IDGLCK G+++ A  +F       
Sbjct: 569 LIHTLCKN------SDMDGALRIISPSIISYSII--IDGLCKRGRVDEATNIFHQAIDAK 620

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           ++P+VV Y I+I G C  G++ +A  L+  M   GV P+
Sbjct: 621 ILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD 659



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 36/221 (16%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
            V  +  +++   +  +V ++L+ +  ++ +G R  +V+ N +  GL  + Q+E A ++ 
Sbjct: 108 GVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGL-SVDQIEVASRML 166

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG---- 169
             +     A    T+ T I+G CK G +  A ELF+ +        + AYS LIDG    
Sbjct: 167 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKA 226

Query: 170 -------------------------------LCKIGKLETAWELFQSLPRVGLMPNVVTY 198
                                            K G L TA+++++ +   G+ PNVVTY
Sbjct: 227 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTY 286

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            I+I G C DG++ +A  ++  +  +G+ P+ VT+++L+ G
Sbjct: 287 TILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDG 327



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 8/148 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EAS+  + +++  + P+   Y+T+I G+C    +D A  +F  +       N VT   
Sbjct: 509 VEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTI 568

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  D++ +L        + I P++++Y+ +  GL +  +V+ A  +F +   + 
Sbjct: 569 LIHTLCKNSDMDGAL--------RIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAK 620

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF 148
           +  +   Y   I G CK G +VEAA L+
Sbjct: 621 ILPDVVAYAILIRGCCKVGRLVEAALLY 648



 Score = 44.3 bits (103), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 16/128 (12%)

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           D LC+ G +                 G+ A+  ++D L + G++  A +  + +   G  
Sbjct: 97  DKLCRGGTV---------------PFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFR 141

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            ++V+ N ++ G   D Q++ A  +   +   G APN VTF TL+ G  +  E  +  EL
Sbjct: 142 VDIVSCNKILKGLSVD-QIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFEL 200

Query: 253 LHRMDERN 260
              M++R 
Sbjct: 201 FKVMEQRG 208


>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 444

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 130/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +L  M   G+ PN   ++ LIDGFC    +  A ++F  M+  G   NVVTYN+
Sbjct: 196 MYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNS 255

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    V E+  L  +M++  + P ++T+N L +G  +   V+ A +LF++M    
Sbjct: 256 LINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQR 315

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +TYN  ID  CK+  + +A  L+R +        +  Y+CLI GLC+ G LE A 
Sbjct: 316 ITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGAR 375

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                +    L  +++TYNI++   CN G+M K   L  +M  KG+ P+ +T+NT++ G
Sbjct: 376 NRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDG 434



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 120/219 (54%)

Query: 38  RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF 97
           +A  +   M  +G   N VT+N LI+G+C  K+V  ++ +++EM  +G++P VVTYN+L 
Sbjct: 198 KADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLI 257

Query: 98  HGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +GL    +V  A  L D+M +S +     T+N  ++G CKN  + +A ELF  +   +  
Sbjct: 258 NGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRIT 317

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             +  Y+ LID  CK   +E A+ L++ +   G+ P+V TYN +I G C  G ++ A + 
Sbjct: 318 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNR 377

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +M+ K +  + +T+N LM       E  K + LL  M
Sbjct: 378 VSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEM 416



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 2/209 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTLI 62
           A ++   M ++GV+PN   Y++LI+G C  G+++ A  L   M +N C+  N++T+N L+
Sbjct: 234 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQM-VNSCLEPNIITHNALL 292

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK K V+++  L+ +M  + I P V TYN L     +   +E A  L+  M    V 
Sbjct: 293 NGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVY 352

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + STYN  I GLC+ G +  A      +     +  +  Y+ L+D LC  G+++    L
Sbjct: 353 PDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRL 412

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
              + + GL P+ +TYN MI G+  +G +
Sbjct: 413 LDEMCKKGLKPSQLTYNTMIDGYSKEGNL 441



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 110/220 (50%), Gaps = 5/220 (2%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           E F      G   +V + N L++G  K    +  L    EM + GI P  VT+N L  G 
Sbjct: 169 EAFKRASDYGLKLSVTSCNPLMSGLVKMYKADAIL---KEMKADGICPNEVTFNILIDGF 225

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC-ELG 159
                V  A+K+F EM    V     TYN+ I+GLC NG + EA  L R   V  C E  
Sbjct: 226 CNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTL-RDQMVNSCLEPN 284

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           I  ++ L++G CK   ++ A ELF+ +P+  + PNV TYNI+I  +C D  M+ A  L+ 
Sbjct: 285 IITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYR 344

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            M  KGV P+  T+N L++G  R  +       +  MD +
Sbjct: 345 IMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTK 384



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 78/174 (44%), Gaps = 35/174 (20%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ L D M+   + PN   ++ L++GFC    + +A ELF  M       NV TYN 
Sbjct: 266 VNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNI 325

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA----------- 109
           LI+ YCK +++E++  LY  ML KG+ P V TYN L  GL     +E A           
Sbjct: 326 LIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKH 385

Query: 110 ------------------------LKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
                                   L+L DEM    +     TYNT IDG  K G
Sbjct: 386 LKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEG 439



 Score = 37.7 bits (86), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 33/63 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  + ++ +   Y+ L+D  C  GE+ +   L   M   G   + +TYNT+I+GY K  +
Sbjct: 381 MDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGN 440

Query: 71  VEE 73
           + +
Sbjct: 441 LRQ 443


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 138/251 (54%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RL + M +RG++P+ + Y+ L+ G C  G++D A +L+     +G + N+ TY  ++ GY
Sbjct: 544 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 603

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK   +E+  NL++E+LSK +    + YN +     +   V  AL+L + M+   +    
Sbjct: 604 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 663

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
           +TY++ I G+C  G + +A  L   +R       +  Y+ LI G CK+G+++TA   +  
Sbjct: 664 ATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLE 723

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +    + PN  TY +MI G+C  G M+KA++L + M+  G+ P+ VT+N L  G  + N+
Sbjct: 724 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 783

Query: 246 TSKVVELLHRM 256
                ++  +M
Sbjct: 784 MDNAFKVCDQM 794



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 123/237 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+ L   ++++G   +    + LI G C  G++  A  +   M   G   + +TYN LI
Sbjct: 471 EATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 530

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C    VE    L  EM  +GI+P + TYN L  GL  + +++ A+KL+DE + S + 
Sbjct: 531 LGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLI 590

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           +   TY   ++G CK   I +   LF  L   K EL    Y+ +I   C+ G +  A +L
Sbjct: 591 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQL 650

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++   G++PN  TY+ +IHG CN G ++ A  L  +M  +G  PN V +  L+ G
Sbjct: 651 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EASR++  M++RG+  +   Y+ LI GFC  G+++    L   M   G   ++ TYN 
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C    +++++ L+ E  + G+   + TY  +  G  + +++E    LF+E+    
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   +  YN  I   C+NG +  A +L   ++          YS LI G+C IG +E A 
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 683

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G +PNVV Y  +I G+C  GQMD A   +L+M +  + PN  T+  ++ G 
Sbjct: 684 HLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGY 743

Query: 241 IRNNETSKVVELLHRMDE 258
            +     K   LL +M E
Sbjct: 744 CKLGNMEKANNLLIKMKE 761



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 118/237 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A R   +M+ R  RP+  + + L+ G C  G+   A EL+  +   G   + VT N LI
Sbjct: 436 SAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALI 495

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C    + E+  +  EML +G+    +TYN L  G     +VE   +L +EM    + 
Sbjct: 496 HGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQ 555

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  + GLC  G + +A +L+   +       I  Y  +++G CK  ++E    L
Sbjct: 556 PDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 615

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F  L    +  N + YNI+I   C +G +  A  L  +M++KG+ PNC T+++L+ G
Sbjct: 616 FNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 672



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 126/296 (42%), Gaps = 39/296 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L   M + G+ PN   Y+ +I+G C  G +D A EL   M + G   N+ TY  
Sbjct: 259 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 318

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K    ++  ++  EM+  G  P VV +N L  G  ++  +E ALK+ D M   +
Sbjct: 319 LINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 378

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--------------- 165
           +   + T  + + G CK+  I  A        +L   L I   +C               
Sbjct: 379 ITPTSVTLYSLMQGFCKSDQIEHAENALE--EILSSGLSIHPDNCYSVVHWLCKKFRYHS 436

Query: 166 ----------------------LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
                                 L+ GLCK GK   A EL+  L   G   + VT N +IH
Sbjct: 437 AFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIH 496

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G C  G++ +A  +  +M  +G+  + +T+N L+LG     +      L   M +R
Sbjct: 497 GLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 552



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 37/295 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF-------VSMDINGCMH 53
           ++ A ++ D+MI + + P +    +L+ GFC + +I+ A           +S+  + C +
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC-Y 422

Query: 54  NVVTY-----------------------------NTLINGYCKTKDVEESLNLYSEMLSK 84
           +VV +                               L+ G CK     E+  L+  +L K
Sbjct: 423 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 482

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G   + VT N L HGL    ++  A ++  EM    +  +  TYN  I G C  G +   
Sbjct: 483 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 542

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             L   +     +  I  Y+ L+ GLC +GKL+ A +L+      GL+ N+ TY IM+ G
Sbjct: 543 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEG 602

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +C   +++   +LF ++ +K +  N + +N ++    +N   +  ++LL  M  +
Sbjct: 603 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 657



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 4/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G  P+ F ++ +I+  C  G+++ A ELF+ M+  G   NVVTYN +ING C+   
Sbjct: 234 VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 293

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +  L  +M  KG++P + TY  L +GL +++  +    + DEM  S        +N 
Sbjct: 294 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNN 353

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLK--CELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            IDG CK G I E A   + + + K      +  YS L+ G CK  ++E A    + +  
Sbjct: 354 LIDGYCKMGNI-EGALKIKDVMISKNITPTSVTLYS-LMQGFCKSDQIEHAENALEEILS 411

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            GL  +      ++H  C   +   A      M ++   P+ +    L+ G  ++ +  +
Sbjct: 412 SGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLE 471

Query: 249 VVELLHRMDER 259
             EL  R+ E+
Sbjct: 472 ATELWFRLLEK 482



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 103/205 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++   L + ++ + +  N+ VY+ +I   C  G +  A +L  +M   G + N  TY++
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    VE++ +L  EM  +G  P VV Y  L  G  ++ Q++ A   + EM   +
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 728

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   IDG CK G + +A  L   ++       +  Y+ L +G CK   ++ A+
Sbjct: 729 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 788

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++   +   GL  + +TY  ++HG+
Sbjct: 789 KVCDQMATEGLPVDEITYTTLVHGW 813



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 11/264 (4%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDG----FCLTGE---IDRARELFVSMDINGCMHNVVTYN 59
           +L L+  + + P   +   LIDG      L  E   I+ A  LF    + G       ++
Sbjct: 116 ILLLIRSKFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFD 175

Query: 60  TLINGYC---KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            LI+ Y    +      +++++  +  KG  P++ T N L   L + ++ E   ++F  M
Sbjct: 176 LLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM 235

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                  +  ++   I+ LCK G +  A ELF  +  L     +  Y+C+I+GLC+ G+L
Sbjct: 236 SEG-ACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRL 294

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A+EL + +   G+ PN+ TY  +I+G       DK + +  +M   G  PN V FN L
Sbjct: 295 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNL 354

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  +       +++   M  +N
Sbjct: 355 IDGYCKMGNIEGALKIKDVMISKN 378


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 140/258 (54%), Gaps = 1/258 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  + +++  + V  NA+ +  +I G C  G   R   L   ++  G   NVV Y TL
Sbjct: 141 DKAWWIFNVLKSK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTL 199

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK  DV  + NL+ +M   G+ P   TY+ L +G F+        ++++ M  S +
Sbjct: 200 IDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGI 259

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 YN  I   C +G + +A ++F  +R      G+  Y+ LI GLC+  K   A +
Sbjct: 260 VPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVK 319

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + +VGL PN+VTYNI+I+GFC+ G+MD A  LF  +++ G++P  VT+NTL+ G  
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYS 379

Query: 242 RNNETSKVVELLHRMDER 259
           +    +  ++L+  M+ER
Sbjct: 380 KVENLAGALDLVKEMEER 397



 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RLL ++ + G+ PN  +Y+TLIDG C  G++  A+ LF  MD  G + N  TY+ L+NG+
Sbjct: 179 RLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGF 238

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K     E   +Y  M   GI P    YN L         V+ A K+F EM+   +A   
Sbjct: 239 FKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGV 298

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN  I GLC+     EA +L   +  +     I  Y+ LI+G C +GK++TA  LF  
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQ 358

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           L   GL P +VTYN +I G+     +  A DL  +ME + +A + VT+  L+    R N 
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNY 418

Query: 246 TSKVVELLHRMDERN 260
           T K  E +H + E++
Sbjct: 419 TDKACE-MHSLMEKS 432



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 139/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  ++ + M + G+ PNA+ Y+ LI  +C  G +D+A ++F  M   G    V+TYN LI
Sbjct: 246 EGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+ K   E++ L  ++   G+ P +VTYN L +G  ++ +++ A++LF++++ S ++
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT I G  K   +  A +L + +           Y+ LID   ++   + A E+
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEM 425

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + GL+P+V TY+++IHG C +G M +A   F  +    + PN V +NT++ G  +
Sbjct: 426 HSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 243 NNETSKVVELLHRM 256
              + + + LL+ M
Sbjct: 486 EGSSYRALRLLNEM 499



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 132/253 (52%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M ++G+      Y+ LI G C   +   A +L   ++  G   N+VTYN 
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C    ++ ++ L++++ S G+ PT+VTYNTL  G  ++  +  AL L  EM+   
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TY   ID   +  Y  +A E+   +        +  YS LI G C  G ++ A 
Sbjct: 399 IARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEAS 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F+SL  + L PN V YN MIHG+C +G   +A  L  +M   G+ PN  +F + M G 
Sbjct: 459 KPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTM-GL 517

Query: 241 IRNNETSKVVELL 253
           +  +E  K  ELL
Sbjct: 518 LCRDEKWKEAELL 530



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 117/227 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L+  + + G+ PN   Y+ LI+GFC  G++D A  LF  +  +G    +VTYNTLI
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLI 375

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GY K +++  +L+L  EM  + I  + VTY  L      ++  + A ++   M+ S + 
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLV 435

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  I G C NG + EA++ F++L  +  +     Y+ +I G CK G    A  L
Sbjct: 436 PDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRL 495

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
              +   G++PNV ++   +   C D +  +A  L   M   G+ P+
Sbjct: 496 LNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPS 542



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 49/294 (16%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL-FVSMDINGCMHNVVTYNTLIN 63
           S +L+ ++  G+ P A    +LI    ++G I  +  L         C      Y+ ++N
Sbjct: 42  SFILNHLLSSGMLPQA---QSLILRL-ISGRIPSSLMLQLTQAHFTSCSTYTPLYDAIVN 97

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            Y  +   +++L     M+ +G  P   T+N L   L   +  + A  +F+ ++ S V  
Sbjct: 98  AYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK-SKVVL 156

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETA 179
              ++   I G C+ GY V    +FR L VL+ E G+      Y+ LIDG CK G +  A
Sbjct: 157 NAYSFGIMITGCCEAGYFVR---VFRLLAVLE-EFGLSPNVVIYTTLIDGCCKNGDVMLA 212

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGF---------------------------------- 205
             LF  + R+GL+PN  TY+++++GF                                  
Sbjct: 213 KNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISE 272

Query: 206 -CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            CNDG +DKA  +F +M  KG+A   +T+N L+ G  R  +  + V+L+H++++
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 64/127 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  +  LM + G+ P+ + YS LI G C+ G +  A + F S+       N V YNT+
Sbjct: 420 DKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTM 479

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYCK      +L L +EM+  G+ P V ++ +    L    + + A  L  +M +S +
Sbjct: 480 IHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGL 539

Query: 122 AAETSTY 128
               S Y
Sbjct: 540 KPSVSLY 546



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 53/93 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EAS+    + +  ++PN+ +Y+T+I G+C  G   RA  L   M  +G + NV ++ +
Sbjct: 454 MKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
            +   C+ +  +E+  L  +M++ G++P+V  Y
Sbjct: 514 TMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 138/255 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M + G+ P+   Y+TLIDG+   G +D +  LF  M   GC  +V+TYN LIN
Sbjct: 151 ARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALIN 210

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK K +  +   + EM  K ++P V++Y+TL   L +   ++ A+K F +M    +  
Sbjct: 211 SFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLP 270

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY++ ID  CK G + EA  L   +     +L I  Y+ L+DGLC+ G +  A ELF
Sbjct: 271 NEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELF 330

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +++ + G+ PN+  Y  +IHG      MDKA +LF +M  K + P+ + + T++ G    
Sbjct: 331 RAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSE 390

Query: 244 NETSKVVELLHRMDE 258
           ++  +   ++  M E
Sbjct: 391 SKLEECKIIMTEMKE 405



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L D M+Q  V  N   Y+TL+DG C  G ++ A ELF +M   G   N+  Y  
Sbjct: 288 LGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTA 347

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K + +++++ L++EM  K I+P ++ + T+  GL    ++E    +  EM+ S 
Sbjct: 348 LIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESG 407

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A    Y T +D   K G   EA  L   +R L  E+ +  +  LIDGLCK G ++ A 
Sbjct: 408 IGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAI 467

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +P   L PNV  Y  +I G C +  +  A  LF +M+ K + P+ + +  ++ G 
Sbjct: 468 YYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGN 527

Query: 241 IRNNETSKVVELLHRMDE 258
           +++    + + + ++M E
Sbjct: 528 LKHGNFQEALNMRNKMME 545



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 137/295 (46%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +    M +  V P A   +  +      GE D +R+ F  M   G    V TYN 
Sbjct: 78  LEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNI 137

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK  D+  + +L+ +M   G+ P +VTYNTL  G  +I  ++ ++ LF+EM+   
Sbjct: 138 MIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMG 197

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  I+  CK   ++ A E FR ++    +  + +YS LID LCK G ++ A 
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAI 257

Query: 181 ELFQSLPRVGLMP-----------------------------------NVVTYNIMIHGF 205
           + F  + RVGL+P                                   N+VTY  ++ G 
Sbjct: 258 KFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGL 317

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C +G M++A +LF  M   GV PN   +  L+ G I+     K +EL + M E++
Sbjct: 318 CEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKD 372



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 8/264 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A +    M + G+ PN F YS+LID  C  G +  A  L   M       N+VTY T
Sbjct: 253 MQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTT 312

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C+   + E+  L+  M   G+ P +  Y  L HG  ++  ++ A++LF+EM+  D
Sbjct: 313 LLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKD 372

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           +  +   + T + GLC    + E   +   ++    E GI A    Y+ L+D   K G  
Sbjct: 373 IKPDILLWGTIVWGLCSESKLEECKIIMTEMK----ESGIGANPVIYTTLMDAYFKAGNR 428

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  L + +  +G    VVT+  +I G C  G + +A   F  M    + PN   +  L
Sbjct: 429 TEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTAL 488

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  +NN      +L   M ++N
Sbjct: 489 IDGLCKNNCIGDAKKLFDEMQDKN 512



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 114/229 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  L + M ++ ++P+  ++ T++ G C   +++  + +   M  +G   N V Y T
Sbjct: 358 MDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTT 417

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ Y K  +  E++NL  EM   G   TVVT+  L  GL +   V+ A+  F  M   D
Sbjct: 418 LMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD 477

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    + Y   IDGLCKN  I +A +LF  ++         AY+ +IDG  K G  + A 
Sbjct: 478 LQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEAL 537

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            +   +  +G+  ++  Y  ++ G    GQ+ +A     +M  KG+ P+
Sbjct: 538 NMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 110/220 (50%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P   V+  L       G ++ A + F+ M     +    + N  ++   K  + + S + 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M+  GI PTV TYN +   + +   +  A  LF++M+   +  +  TYNT IDG  K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G + E+  LF  ++ + CE  +  Y+ LI+  CK   +  A+E F+ +    L PNV++
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           Y+ +I   C +G M  A   F+DM   G+ PN  T+++L+
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLI 279



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 111/226 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   ++  M + G+  N  +Y+TL+D +   G    A  L   M   G    VVT+  
Sbjct: 393 LEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCA 452

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V+E++  +  M    ++P V  Y  L  GL + + +  A KLFDEMQ  +
Sbjct: 453 LIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKN 512

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   IDG  K+G   EA  +   +  +  EL + AY+ L+ GL + G+++ A 
Sbjct: 513 MIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQAR 572

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +    +   G++P+      ++      G +D+A +L  ++  KG+
Sbjct: 573 KFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 95/189 (50%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C+     ++ L +   +   +E +   +  M    + P   + N   H L +  + + 
Sbjct: 56  NVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDL 115

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           +   F +M  + +A    TYN  I  +CK G ++ A  LF  ++ +     I  Y+ LID
Sbjct: 116 SRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLID 175

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  KIG L+ +  LF+ +  +G  P+V+TYN +I+ FC    M +A + F +M+ K + P
Sbjct: 176 GYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKP 235

Query: 229 NCVTFNTLM 237
           N ++++TL+
Sbjct: 236 NVISYSTLI 244



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 85/173 (49%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P    ++ LF  L E+  +E A + F  M    V  +  + N F+  L K G    + + 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           FR +        +  Y+ +I  +CK G + TA  LF+ + ++GL P++VTYN +I G+  
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G +D++  LF +M+  G  P+ +T+N L+    +     +  E    M +++
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 22/175 (12%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS--------TYNTFIDG-- 134
           G R T  +Y  L H LF      HA  +  E+  S      S        T N  + G  
Sbjct: 4   GFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFG 63

Query: 135 --------LCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQ 184
                   L + G +  A + F  LR+ K  +  +A SC   +  L K G+ + + + F+
Sbjct: 64  VFDALFSVLVELGMLEAAGQCF--LRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFR 121

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +   G+ P V TYNIMI   C +G M  A  LF  M+  G+ P+ VT+NTL+ G
Sbjct: 122 DMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +LD+M  RG+ PN   Y+TLI G      +D A ELF +M+  G      +Y  
Sbjct: 383 VDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVL 442

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+ Y K  D E++L+ + +M  +GI P++   N   + L E+ ++  A  +F+++ +  
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCG 502

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ ++ TYN  +    K G I +A +L   +    CE  I   + LID L K G+++ AW
Sbjct: 503 LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAW 562

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  L  + L P VVTYNI+I G   +G++ KA DLF  M+  G  PN VTFN L+   
Sbjct: 563 QMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCL 622

Query: 241 IRNNETSKVVELLHRM 256
            +N+     +++  RM
Sbjct: 623 CKNDAVDLALKMFCRM 638



 Score =  141 bits (355), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L  M   G  P+   Y+ LID  C  G++D+A+EL+  M  +    ++VTY T
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYIT 337

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +    D+E     +SEM + G  P VVTY  L   L +  +V+ A  + D M+   
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYNT I GL     + EA ELF  +  L       +Y   ID   K+G  E A 
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F+ + + G+MP++   N  ++     G++ +A D+F D+   G++P+ VT+N +M   
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCY 517

Query: 241 IRNNETSKVVELLHRM 256
            +  +  K  +LL  M
Sbjct: 518 SKAGQIDKATKLLTEM 533



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 129/237 (54%)

Query: 2    DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            + A +L   M   G  PN F Y+ L+D    +  ID   EL+  M   GC  N++T+N +
Sbjct: 805  EAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNII 864

Query: 62   INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            I+   K+  + ++L+LY E++S    PT  TY  L  GL +  + E A+K+F+EM     
Sbjct: 865  ISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQC 924

Query: 122  AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                + YN  I+G  K G +  A +LF+ +        +++Y+ L++ L   G+++ A  
Sbjct: 925  KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVH 984

Query: 182  LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             F+ L   GL P+ V+YN+MI+G     ++++A  LF +M+ +G++P   T+N L+L
Sbjct: 985  YFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALIL 1041



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 135/258 (52%), Gaps = 1/258 (0%)

Query: 3    EASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A +L D   +  G  P    Y+ L+DG       + A +LFV M   GC  N+ TYN L
Sbjct: 770  DAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLL 829

Query: 62   INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            ++ + K+K ++E   LY+EML +G +P ++T+N +   L + + +  AL L+ E+   D 
Sbjct: 830  LDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDF 889

Query: 122  AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            +    TY   I GL K G   EA ++F  +   +C+     Y+ LI+G  K G +  A +
Sbjct: 890  SPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACD 949

Query: 182  LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            LF+ + + G+ P++ +Y I++      G++D A   F +++  G+ P+ V++N ++ G  
Sbjct: 950  LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLG 1009

Query: 242  RNNETSKVVELLHRMDER 259
            ++    + + L   M  R
Sbjct: 1010 KSRRLEEALSLFSEMKNR 1027



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 119/239 (49%), Gaps = 3/239 (1%)

Query: 5    SRLLDL---MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            ++ LDL   +I     P    Y  LI G    G  + A ++F  M    C  N   YN L
Sbjct: 875  NKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNIL 934

Query: 62   INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            ING+ K  +V  + +L+  M+ +GIRP + +Y  L   LF   +V+ A+  F+E++ + +
Sbjct: 935  INGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGL 994

Query: 122  AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              +T +YN  I+GL K+  + EA  LF  ++       +  Y+ LI      G ++ A +
Sbjct: 995  DPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGK 1054

Query: 182  LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ L  +GL PNV TYN +I G    G  D+A  +F  M   G +PN  TF  L   C
Sbjct: 1055 MFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNKC 1113



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 36/288 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNV----- 55
           +DEA  L + M   GV P A+ Y   ID +   G+ ++A + F  M   G M ++     
Sbjct: 418 LDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNA 477

Query: 56  ------------------------------VTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                         VTYN ++  Y K   ++++  L +EMLS+G
Sbjct: 478 SLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEG 537

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P ++  N+L   L++  +V+ A ++F  ++   +A    TYN  I GL K G +++A 
Sbjct: 538 CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +LF +++   C      ++ L+D LCK   ++ A ++F  +  +   P+V+TYN +I+G 
Sbjct: 598 DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
             +G+   A   +  M+ K ++P+ VT  TL+ G +++      ++++
Sbjct: 658 IKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIV 704



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 118/256 (46%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A   L  M Q G   NA+ Y+ LI      G    A +++  M   G   ++ TY+ L+
Sbjct: 175 QAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALM 234

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               + +D    ++L  EM + G+RP + TY      L    +++ A  +   M+     
Sbjct: 235 VALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCG 294

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   ID LC  G + +A EL+  +R    +  +  Y  L+      G LET    
Sbjct: 295 PDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRF 354

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +   G  P+VVTY I++   C  G++D+A D+   M  +G+ PN  T+NTL+ G + 
Sbjct: 355 WSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLN 414

Query: 243 NNETSKVVELLHRMDE 258
                + +EL + M+ 
Sbjct: 415 LRRLDEALELFNNMES 430



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 105/197 (53%)

Query: 2    DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +EA ++ + M     +PN  +Y+ LI+GF   G ++ A +LF  M   G   ++ +Y  L
Sbjct: 910  EEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTIL 969

Query: 62   INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            +     T  V+++++ + E+   G+ P  V+YN + +GL +  ++E AL LF EM++  +
Sbjct: 970  VECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGI 1029

Query: 122  AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            + E  TYN  I      G + +A ++F  L+ +  E  +  Y+ LI G  K G  + A+ 
Sbjct: 1030 SPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFS 1089

Query: 182  LFQSLPRVGLMPNVVTY 198
            +F+ +  VG  PN  T+
Sbjct: 1090 VFKKMMIVGCSPNAGTF 1106



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 38/293 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++   +    + P    Y+ LI G    G++ +A +LF SM  +GC  N VT+N 
Sbjct: 558 VDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNA 617

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK   V+ +L ++  M      P V+TYNT+ +GL +  +  +A   + +M+   
Sbjct: 618 LLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF- 676

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--------------RVLKC---ELGIEAY 163
           ++ +  T  T + G+ K+G + +A ++                   +++C   E  IE  
Sbjct: 677 LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEA 736

Query: 164 SCLIDG-------------------LCKIGKLETAWELFQSLPR-VGLMPNVVTYNIMIH 203
               +G                   LCK  K   A +LF    + +G  P   +YN ++ 
Sbjct: 737 ISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMD 796

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G       + A  LF++M+  G  PN  T+N L+    ++    ++ EL + M
Sbjct: 797 GLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEM 849



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 45/242 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++ + + DLM ++ +  N   Y T+     + G I +A      M   G + N  +YN 
Sbjct: 138 VEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNG 197

Query: 61  LI-----NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           LI      G+CK     E+L +Y  M+S+G++P++ TY+ L   L         + L +E
Sbjct: 198 LIYFLLQPGFCK-----EALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEE 252

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M+                                    L     I  Y+  I  L + G+
Sbjct: 253 ME-----------------------------------TLGLRPNIYTYTICIRVLGRAGR 277

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A+ + +++   G  P+VVTY ++I   C  G++DKA +L+  M A    P+ VT+ T
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYIT 337

Query: 236 LM 237
           LM
Sbjct: 338 LM 339



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            ++EA  L   M  RG+ P  + Y+ LI  F   G +D+A ++F  +   G   NV TYN 
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNA 1073

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
            LI G+ K+ + + + +++ +M+  G  P   T+  L
Sbjct: 1074 LIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 17/234 (7%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN----------TLINGYCKTKD 70
           F   +  +G  +  +    R+L + +    C H VV  N           +I       D
Sbjct: 42  FKMKSFPNGSSVIWKKHGKRQLGLRVFETRCAHEVVVVNGKSKSSVSSEEVIGALKSISD 101

Query: 71  VEESLNLYSEMLSK--GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
              +L+ Y +M+S+   I  T  T N +   L    +VE    +FD MQ   +    +TY
Sbjct: 102 PNSALS-YFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTY 160

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            T    L   G I +A      +R     L   +Y+ LI  L + G  + A ++++ +  
Sbjct: 161 LTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMIS 220

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            GL P++ TY+ ++             DL  +ME  G+ PN  T+      CIR
Sbjct: 221 EGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTI----CIR 270



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 34/63 (53%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D+A ++ + +   G+ PN F Y+ LI G   +G  DRA  +F  M I GC  N  T+  
Sbjct: 1049 VDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQ 1108

Query: 61   LIN 63
            L N
Sbjct: 1109 LPN 1111


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   G +P+ + YS LI+G C   ++D A ELF  M   G + N VT+ T
Sbjct: 187 LDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   ++ ++ +Y ++LS+G+ P ++TYNTL +G  +   ++    L DEM    
Sbjct: 247 LIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L    Y+ LI GLCK G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY I+++ FC +G ++    L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 135/253 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G++P+   ++TL++G+   G +D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++E+  L+ EML KG+ P  VT+ TL  G  +  +++ A++++ ++    ++ 
Sbjct: 215 GLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I G CK G + +  +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    +  + V Y  +I G C +G+   A  +  +M + G+ P+  T+  +M    +N
Sbjct: 335 KKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKN 394

Query: 244 NETSKVVELLHRM 256
            + +   +LL  M
Sbjct: 395 GDVNTGSKLLKEM 407



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  +  ++  +   G++P+VV++NTL +G  ++  ++   +L + M 
Sbjct: 139 FNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S    +  TY+  I+GLCK   + EA ELF  +           ++ LIDG CK GKL+
Sbjct: 199 ASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +   GL P+++TYN +I+GFC  G + +  DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   +M E N
Sbjct: 319 DGSCKEGDLETAFEYRKKMIEEN 341



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 128/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  GEI  A+ +F ++   G   +VV++NTL+NGY K   
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGI 186

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L + M + G +P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 187 LDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTT 246

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI G CK G L+   +L   +   G
Sbjct: 247 LIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKG 306

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAE 366

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 367 KMLREM 372



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS +   +++ +G  R + +V+S LI  +  +G +  A E F     +       T  
Sbjct: 46  DSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +++   K K  +     Y E+L  G   ++  +N L H   +  ++  A  +FD +   
Sbjct: 106 KVLDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT ++G  K G + E   L   +     +  +  YS LI+GLCK  K++ A
Sbjct: 166 GLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ELF  +   GL+PN VT+  +I G C +G++D A +++  + ++G++P+ +T+NTL+ G
Sbjct: 226 HELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  +  +L+  M
Sbjct: 286 FCKKGDLKQTRDLIDEM 302


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 132/254 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M + GV PN + Y+ LI  +C TGE +RAR LF  M + G + NVV+YNTLI G C
Sbjct: 95  LFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLC 154

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   + ++  L   M ++G RP+++T+N L  G  +  ++ +AL  F++M+ +       
Sbjct: 155 RHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAV 214

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G C+   +  A      ++    E     Y+ LID   +   +  A+E+   +
Sbjct: 215 TYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGM 274

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL  +  TY +++   C +G M  A  LF  M  KGV P+ V ++ ++ G  R   +
Sbjct: 275 EKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSS 334

Query: 247 SKVVELLHRMDERN 260
            K ++L+  M ++ 
Sbjct: 335 YKALKLIMEMRQKG 348



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 119/235 (50%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + L++G C  G++  AR +F  M + G   N VTY  L++GY      E+   L+ EM  
Sbjct: 42  TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G+ P + TYN L        + E A  LFDEM    +     +YNT I GLC++G + +
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           AA+L   +R       I  ++ L+DG  K GK+  A   F  +   G  P+ VTYN++I 
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           GFC    M +A+    DM+ +G+ P  VT+  L+    R N   K  E+L  M++
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 111/232 (47%), Gaps = 1/232 (0%)

Query: 30  FCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
            C  G++  A  +      +G    +V     L+NG CK  DV E+  ++ EM   G+ P
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
             VTY  L HG F   Q E    LF+EM+   V     TYN  I   C+ G    A  LF
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             + V      + +Y+ LI GLC+ GKL  A +L   +   G  P+++T+N+++ G+   
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G+M  A   F  M+A G  P+ VT+N L+ G  R  + ++    L  M ER 
Sbjct: 192 GKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 117/258 (45%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+ D M   G+ PN   Y+ L+ G+   G+ ++   LF  M   G   N+ TYN LI
Sbjct: 56  EARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLI 115

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +C+T + E + +L+ EM  +GI   VV+YNTL  GL    ++  A KL D M+     
Sbjct: 116 GEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTR 175

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +DG  K G +  A   F  ++    +     Y+ LI G C+   +  A   
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   GL P  VTY I+I  F  +  M KA ++   ME  G+  +  T+  L+     
Sbjct: 236 LSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCM 295

Query: 243 NNETSKVVELLHRMDERN 260
                   +L   M E+ 
Sbjct: 296 EGNMKDARKLFQSMGEKG 313



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 110/224 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A++LLD+M   G RP+   ++ L+DG+   G++  A   F  M   G   + VTYN LI
Sbjct: 161 DAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLI 220

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C+ +D+  +    S+M  +G+ PT VTY  L       + +  A ++   M+ + + 
Sbjct: 221 AGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLE 280

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   +  LC  G + +A +LF+++     E     Y  +I G  + G    A +L
Sbjct: 281 VDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKL 340

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
              + + GL+PN  +Y + I   C D +  +A  L  DM   G+
Sbjct: 341 IMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGL 384



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 70/148 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A+R L  M +RG+ P    Y+ LID F     + +A E+   M+  G   +  TY  
Sbjct: 229 MTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGV 288

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C   +++++  L+  M  KG+ P+ V Y+ + +G         ALKL  EM+   
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKG 348

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF 148
           +   +++Y   I  LCK+    EA  L 
Sbjct: 349 LIPNSASYGLTIRVLCKDDKCQEAEALL 376



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 76/191 (39%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A    + M   G +P+A  Y+ LI GFC   ++ RA      M   G     VTY  
Sbjct: 194 MSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTI 253

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + +   + ++  + + M   G+     TY  L   L     ++ A KLF  M    
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      Y+  I G  + G   +A +L   +R         +Y   I  LCK  K + A 
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAE 373

Query: 181 ELFQSLPRVGL 191
            L   + R GL
Sbjct: 374 ALLDDMVRAGL 384



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 62/137 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +L  M + G+  +A  Y  L+   C+ G +  AR+LF SM   G   + V Y+ 
Sbjct: 264 MGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GY +     ++L L  EM  KG+ P   +Y      L +  + + A  L D+M  + 
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAG 383

Query: 121 VAAETSTYNTFIDGLCK 137
           +    S     +D   +
Sbjct: 384 LQTSESICQALLDAKAR 400


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 130/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + D M+ RG  P+   YS L+D  C      +A  L   M   GC  ++VTYN 
Sbjct: 267 IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNV 326

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  C   DV+E+LN+ S + S G +P  VTY  +   L    + +   +L  EM  ++
Sbjct: 327 LINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNN 386

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +  T+NT +  LC+ G +  A E+   +    C   I  YS ++DGLC +G+++ A 
Sbjct: 387 CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAV 446

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   L   G  P+ + Y  ++ G C+  Q ++A +L  +M      P+ VTFNT++   
Sbjct: 447 ELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASL 506

Query: 241 IRNNETSKVVELLHRMDE 258
            +     + + ++ +M E
Sbjct: 507 CQKGLVDRAIRVVEQMSE 524



 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 135/257 (52%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L+  M+     P+   ++T++   C  G +DRA  +   M  NGC  ++VTYN +
Sbjct: 478 ERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCI 537

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C    +++++ L S++ S G +P +VT+NTL  GL  + + E A +L   M  S+ 
Sbjct: 538 IDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNC 597

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T+NT I  LC+ G + +A E  + +    C      YS ++D L K GK + A E
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALE 657

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +      P+++TYN +I      G+M++A DL   M + G+ P+  T+ +L  G  
Sbjct: 658 LLSGM--TNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVC 715

Query: 242 RNNETSKVVELLHRMDE 258
           R + T + V +L R+ +
Sbjct: 716 REDGTDRAVRMLRRVQD 732



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 129/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LL  M      P+   ++T++   C  G +DRA E+   M  +GC+ ++VTY++++
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSIL 433

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C    V++++ L S + S G +P  + Y T+  GL    Q E A +L  EM  SD  
Sbjct: 434 DGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCP 493

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+NT +  LC+ G +  A  +   +    C   I  Y+C+IDGLC    ++ A EL
Sbjct: 494 PDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMEL 553

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L   G  P++VT+N ++ G C   + + A  L  +M      P+ +TFNT++    +
Sbjct: 554 LSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQ 613

Query: 243 NNETSKVVELLHRMDE 258
               ++ +E L  M E
Sbjct: 614 KGLLTQAIETLKIMAE 629



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++D M + G   +   YS+++DG C  G +D A EL   +   GC  + + Y T
Sbjct: 407 VDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 466

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G C T+  E +  L +EML     P  VT+NT+   L +   V+ A+++ ++M  + 
Sbjct: 467 VLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENG 526

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYN  IDGLC    I +A EL   L+   C+  I  ++ L+ GLC + + E A 
Sbjct: 527 CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAE 586

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L  ++ R    P+ +T+N +I   C  G + +A +    M   G  PN  T++ ++   
Sbjct: 587 QLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDAL 646

Query: 241 IRNNETSKVVELLHRM 256
           ++  +    +ELL  M
Sbjct: 647 LKAGKAQAALELLSGM 662



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 35/272 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LLD M  +G  P+   Y+ LI+  C  G++D A  +  ++  +GC  + VTY  ++
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVL 363

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C ++  +E   L +EM S    P  VT+NT+   L +   V+ A+++ D M      
Sbjct: 364 KSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCV 423

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A+  TY++ +DGLC  G + +A EL   L+   C+    AY+ ++ GLC   + E A EL
Sbjct: 424 ADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEEL 483

Query: 183 F-------------------QSLPRVGLM----------------PNVVTYNIMIHGFCN 207
                                SL + GL+                P++VTYN +I G CN
Sbjct: 484 MAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCN 543

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +  +D A +L  D+++ G  P+ VTFNTL+ G
Sbjct: 544 ESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVR--PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +DEA  L D M   G R  P     + LI   C  G +  A  +F ++   G    VVTY
Sbjct: 166 IDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATVVTY 222

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           NT++NGYC+   +E++  L + M      P   T+N L   L    ++  AL +FD+M H
Sbjct: 223 NTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
              +    TY+  +D  CK     +A  L   +R   CE  I  Y+ LI+ +C  G ++ 
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +  +LP  G  P+ VTY  ++   C   +  +  +L  +M +   AP+ VTFNT++ 
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399

Query: 239 GCIRNNETSKVVELLHRMDE 258
              +     + +E++  M E
Sbjct: 400 SLCQQGLVDRAIEVVDHMSE 419



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 8/229 (3%)

Query: 34  GEIDRARELFVSMDINGCMH--NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
           GEID A  LF SM   G  +   VV  N LI   C    V ++  +++ +   G   TVV
Sbjct: 164 GEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATVV 220

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           TYNT+ +G     ++E A +L + M       +T T+N  I  LC  G I +A  +F  +
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLINGMPF---PPDTFTFNPLIRALCVRGRIPDALAVFDDM 277

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
               C   +  YS L+D  CK      A  L   +   G  P++VTYN++I+  CN+G +
Sbjct: 278 LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDV 337

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           D+A ++  ++ + G  P+ VT+  ++     +    +V ELL  M   N
Sbjct: 338 DEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNN 386



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 2/225 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +L+  M++    P+   ++T+I   C  G + +A E    M  NGC+ N  TY+ +
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   K    + +L L S M +    P ++TYNT+   L +  ++E AL L   M  + +
Sbjct: 643 VDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +T+TY +   G+C+      A  + R ++          Y+ ++ G C+  + + A +
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            F  +   G MP+  TY I++      G +D+A  L   + + GV
Sbjct: 761 CFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 2/192 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A   L +M + G  PN+  YS ++D     G+   A EL   M  NG   +++TYNT
Sbjct: 617 LTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM-TNG-TPDLITYNT 674

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+   K   +EE+L+L   M+S G+ P   TY +L +G+      + A+++   +Q + 
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +T+ YN  + G C++     A + F  +    C      Y  L++ L   G L+ A 
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAK 794

Query: 181 ELFQSLPRVGLM 192
            L  SL  +G++
Sbjct: 795 RLLASLCSLGVL 806


>gi|414591617|tpg|DAA42188.1| TPA: hypothetical protein ZEAMMB73_899186 [Zea mays]
          Length = 265

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 129/225 (57%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +++A  +F +M   G   + V Y TL+NGYCK   ++E L+L+ EML KGI+P+ + YN 
Sbjct: 1   MEKALRVFDAMVSAGIEPDDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNI 60

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           +  GLF+  +   A   F EM  S +A +  TYN  + GL KN    EA  LF+ LR + 
Sbjct: 61  IIDGLFQDGRTVPAKVKFHEMTESGIAMDKYTYNIVLRGLFKNRCFDEAIFLFKELRAMN 120

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
            ++ I   + +I G+ +  ++E A +LF S+ R GL+P VVTY+IMI     +G +++A 
Sbjct: 121 VKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 180

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           D+F  M+  G  PN    N ++   ++ NE  +    L ++DERN
Sbjct: 181 DMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 225



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 84/157 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+Q+G++P+  +Y+ +IDG    G    A+  F  M  +G   +  TYN 
Sbjct: 36  IDEGLSLFREMLQKGIKPSTILYNIIIDGLFQDGRTVPAKVKFHEMTESGIAMDKYTYNI 95

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S 
Sbjct: 96  VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSG 155

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           +     TY+  I  L K G + EA ++F +++   CE
Sbjct: 156 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 192


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 134/290 (46%), Gaps = 35/290 (12%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++ + M+  G+ P+ + YSTLI+ +C   E D A+++ V M   GC  N VTYN LI G 
Sbjct: 230 KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 289

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C++  VEE+     +M   G+ P   TY  L +GL +  +   A  L DEM  +++    
Sbjct: 290 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 349

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             Y   IDG  + G   EA ++ + +     +     Y  L+ GLCK+G+++ A  L + 
Sbjct: 350 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 409

Query: 186 LPR-----------------------------------VGLMPNVVTYNIMIHGFCNDGQ 210
           + R                                    G+ PNV TY+IMIHG C  G+
Sbjct: 410 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 469

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +KA DL  +M  KG+ PN   +  L+ G  R    S   E+  +M + N
Sbjct: 470 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 519



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 136/255 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  LLD M    ++PN  VY+ LIDGF   G  D A ++   M   G   N +TY+ L
Sbjct: 331 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 390

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G CK   ++ +  L  +M+    RP  +TYN +  G F  H  + A +L  EM+++ +
Sbjct: 391 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGI 450

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    TY+  I GLC++G   +A++L   +     +     Y+ LI G C+ G +  A E
Sbjct: 451 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACE 510

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + +V ++P++  YN +I G    G+++++   F  M+ +G+ PN  T++ L+ G +
Sbjct: 511 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 570

Query: 242 RNNETSKVVELLHRM 256
           +N +     +L+ RM
Sbjct: 571 KNGDLESAEQLVQRM 585



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 130/255 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA +++  M+  GV+PN   Y  L+ G C  G++DRA  L   M  +    + +TYN +
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+ +    +++  L SEM + GI P V TY+ + HGL +  + E A  L +EM    +
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 Y   I G C+ G +  A E+F  +  +     +  Y+ LI GL K+G++E + +
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  +   GL+PN  TY+ +IHG+  +G ++ A  L   M   G+ PN V +  L+    
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605

Query: 242 RNNETSKVVELLHRM 256
           ++++  KV      M
Sbjct: 606 KSDDIEKVSSTFKSM 620



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 35/290 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++AS LL+ M  +G++PNAFVY+ LI G+C  G +  A E+F  M     + ++  YN+L
Sbjct: 471 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 530

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM----- 116
           I G  K   VEES   +++M  +G+ P   TY+ L HG  +   +E A +L   M     
Sbjct: 531 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 117 ---------------QHSDVAAETSTYNTFID---------------GLCKNGYIVEAAE 146
                          +  D+   +ST+ + +D                L  +G +  A  
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 650

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +   +        +  YS LI GLCK    E A+ +   + + G+ PN+V YN +I G C
Sbjct: 651 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 710

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G +  A ++F  + AKG+ PNCVT+ +L+ G  +  + S    L + M
Sbjct: 711 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 760



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E+++    M +RG+ PN F YS LI G+   G+++ A +L   M   G   N V Y  
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  Y K+ D+E+  + +  ML +G+      Y  L H L     +E A ++   ++ + 
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y++ I GLCK     +A  +   +     +  I  Y+ LIDGLCK G +  A 
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F S+   GL+PN VTY  +I G C  G +  A  L+ +M A G+ P+   ++ L  GC
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779

Query: 241 IRNNETSKVVELLHRM 256
               +  + + L+  M
Sbjct: 780 SSAGDLEQAMFLIEEM 795



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 1/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A R+L  + + G  P+  VYS+LI G C T + ++A  +   M   G   N+V YN 
Sbjct: 645 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 704

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+ D+  + N+++ +L+KG+ P  VTY +L  G  ++  + +A  L++EM  + 
Sbjct: 705 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 764

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+    G    G + +A  L   +  L+    I +++ L+DG CK GK++   
Sbjct: 765 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETL 823

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL+PN +T   +I G    G++ + H +F++++ K        F++L +  
Sbjct: 824 KLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDM 883

Query: 241 IRNNE 245
           I   +
Sbjct: 884 INQGK 888



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 139/283 (49%), Gaps = 33/283 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  +LD M ++GV PN   Y+ LIDG C +G+I  AR +F S+   G + N VTY +L
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 740

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QH 118
           I+G CK  D+  +  LY+EML+ GI P    Y+ L  G      +E A+ L +EM    H
Sbjct: 741 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH 800

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR---VLKCELGIEAYSCLIDGLCKIGK 175
           + +    S++N  +DG CK G + E  +L   +    ++   L IE    +I GL + GK
Sbjct: 801 ASI----SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN---IISGLSEAGK 853

Query: 176 L---------------ETAWELFQSL----PRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           L               E+A   F SL       G +P  V  + MI   C +G +DKA  
Sbjct: 854 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKALM 912

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L   + AK     C ++  ++    R  + S+ + LL  MD+R
Sbjct: 913 LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 955



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 124/257 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RLL  M   G+ PN + YS +I G C +GE ++A +L   M   G   N   Y  LI
Sbjct: 437 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 496

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+  +V  +  ++ +M    + P +  YN+L  GL ++ +VE + K F +MQ   + 
Sbjct: 497 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 556

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  I G  KNG +  A +L + +     +     Y  L++   K   +E     
Sbjct: 557 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 616

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+S+   G+M +   Y I+IH   + G M+ A  +   +E  G  P+   +++L+ G  +
Sbjct: 617 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 676

Query: 243 NNETSKVVELLHRMDER 259
             +  K   +L  M ++
Sbjct: 677 TADREKAFGILDEMSKK 693



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 127/263 (48%), Gaps = 12/263 (4%)

Query: 1   MDEASRLLDLMIQRGVRP-----NAFVYSTL-IDGFCLTGEIDRARELFVSMDINGCMHN 54
           + +A+ ++ +M  RG+ P     NA +   L  D   L  ++   RE  V   I+    +
Sbjct: 190 VQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV---REFMVGAGIS---PD 243

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           V TY+TLI  YCK ++ + +  +  EM  +G     VTYN L  GL     VE A     
Sbjct: 244 VYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK 303

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           +M+   +  +  TY   I+GLCK+    EA  L   +   + +  +  Y+ LIDG  + G
Sbjct: 304 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG 363

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
             + A+++ + +   G+ PN +TY+ ++ G C  GQMD+A  L   M      P+ +T+N
Sbjct: 364 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 423

Query: 235 TLMLGCIRNNETSKVVELLHRMD 257
            ++ G  R++       LL  M+
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEME 446



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 5/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++ S     M+ +GV  +  +Y  LI     +G ++ A  +   ++ NG + +V  Y++
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CKT D E++  +  EM  KG+ P +V YN L  GL +   + +A  +F+ +    
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + IDG CK G I  A  L+  +           YS L  G    G LE A 
Sbjct: 730 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 789

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G   ++ ++N ++ GFC  G+M +   L   +  +G+ PN +T   ++ G 
Sbjct: 790 FLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 848

Query: 241 IRNNETSKV----VELLHRMDE 258
               + S+V    VEL  +  E
Sbjct: 849 SEAGKLSEVHTIFVELQQKTSE 870



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 95/198 (47%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           + L++ Y K+  V+++  +   M  +G+ P++   N L   L     +    K+ + M  
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + ++ +  TY+T I+  CK      A ++   +R   C L    Y+ LI GLC+ G +E 
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A+   + +   GL+P+  TY  +I+G C   + ++A  L  +M    + PN V +  L+ 
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357

Query: 239 GCIRNNETSKVVELLHRM 256
           G +R     +  +++  M
Sbjct: 358 GFMREGNADEAFKMIKEM 375



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 19/206 (9%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M+  G+ P+AFVYS L  G    G++++A  L   M + G   ++ ++N L++G+C
Sbjct: 756 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFC 814

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   ++E+L L   ++ +G+ P  +T   +  GL E  ++     +F E+Q     +   
Sbjct: 815 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 874

Query: 127 TYNT-FIDGL-----------------CKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
            +++ F+D +                 CK G + +A  L   +      +G  +Y  ++D
Sbjct: 875 HFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 934

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPN 194
            LC+ GKL  A  L + + + G+ P+
Sbjct: 935 NLCRKGKLSEALNLLKEMDKRGICPS 960



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 61/130 (46%)

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           +  +D   K+G + +AAE+   +R       I   + L+  L +   +   W++ + +  
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P+V TY+ +I  +C   + D A  + ++M  +G   N VT+N L+ G  R+    +
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297

Query: 249 VVELLHRMDE 258
                  M++
Sbjct: 298 AFGFKKDMED 307


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 133/252 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E S +   M Q+G   +A  Y+ ++DG C +G++D+A E+   M +      V TY +++
Sbjct: 578 ETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIV 637

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  SKGI   V+ Y++L  G  ++ +++ A  + +EM    + 
Sbjct: 638 DGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 697

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N+ +D L K   I EA   F++++ +KC      YS LI+GLC++ K   A+  
Sbjct: 698 PNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVF 757

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +Q + + GL+PNVVTY  MI G    G +  A+ LF   +  G  P+  +FN L+ G   
Sbjct: 758 WQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSN 817

Query: 243 NNETSKVVELLH 254
            N   +  ++  
Sbjct: 818 ANRPMEAYQVFE 829



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 133/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RL + M+  G   N  +Y++LI  F + G  +   +++  M   G   ++   NT
Sbjct: 471 IDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNT 530

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  +VE+   ++ +M S G  P V +Y+ L HGL +  Q      +F  M    
Sbjct: 531 YMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQG 590

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   YN  +DGLCK+G + +A E+   ++V      +  Y  ++DGL KI +L+ A+
Sbjct: 591 FALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAY 650

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G+  NV+ Y+ +I GF   G++D+A+ +  +M  KG+ PN  T+N+LM   
Sbjct: 651 MLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDAL 710

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  E  + +     M E
Sbjct: 711 VKTEEIDEALICFQSMKE 728



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 127/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+ +   +RG  PN+  Y +LIDG    G+ID A  LF  M   G   N + Y +
Sbjct: 436 LEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTS 495

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +      E+   +Y EM+ +G RP +   NT    +F+  +VE    +F++M+   
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFG 555

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y+  I GL K G   E + +F+ +      L   AY+ ++DGLCK GK++ A+
Sbjct: 556 FLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAY 615

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+ + +    + P V TY  ++ G     ++D+A+ LF + ++KG+  N + +++L+ G
Sbjct: 616 EVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG 674



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 133/258 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++  ++   MI+RG RP+  + +T +D     GE+++ R +F  M   G + +V +Y+ L
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSIL 566

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     E+ N++  M  +G       YN +  GL +  +V+ A ++ +EM+   V
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHV 626

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY + +DGL K   + EA  LF   +    EL +  YS LIDG  K+G+++ A+ 
Sbjct: 627 HPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYL 686

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           + + + + GL PNV T+N ++       ++D+A   F  M+    +PN  T++ L+ G  
Sbjct: 687 ILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLC 746

Query: 242 RNNETSKVVELLHRMDER 259
           R  + +K       M ++
Sbjct: 747 RVQKYNKAFVFWQEMQKQ 764



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 121/242 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++ D M   G+ PN    + ++D  C   +++ A  +F S    GC  N VTY +
Sbjct: 401 VNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCS 460

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K   ++++  L+ +ML  G     + Y +L    F   + E   K++ EM    
Sbjct: 461 LIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRG 520

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +  NT++D + K G + +   +F  ++       + +YS LI GL K G+     
Sbjct: 521 GRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETS 580

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +FQ++ + G   +   YN ++ G C  G++DKA+++  +M+ K V P   T+ +++ G 
Sbjct: 581 NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGL 640

Query: 241 IR 242
            +
Sbjct: 641 AK 642



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 121/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L+ M  + V P    Y +++DG      +D A  LF      G   NV+ Y++
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSS 670

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   ++E+  +  EM+ KG+ P V T+N+L   L +  +++ AL  F  M+   
Sbjct: 671 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMK 730

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  T TY+  I+GLC+     +A   ++ ++       +  Y+ +I GL K+G +  A+
Sbjct: 731 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAY 790

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+     G +P+  ++N +I G  N  +  +A+ +F +   +G   N  T  +L+
Sbjct: 791 SLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLL 847



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 1/248 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M      P A+ Y+T+I G+      D A +L   +   GC+ +VV++N+
Sbjct: 297 LGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNS 356

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++    K + V+E+L L+ +++ K  +P + TYN +   L    +V  A K+ DEM+ + 
Sbjct: 357 ILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAG 415

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     + N  +D LCK   + EA  +F +     C      Y  LIDGL K GK++ A+
Sbjct: 416 LFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAY 475

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G   N + Y  +I  F   G+ +  H ++ +M  +G  P+    NT M   
Sbjct: 476 RLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCV 535

Query: 241 IRNNETSK 248
            +  E  K
Sbjct: 536 FKAGEVEK 543



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L+D +    + P+  +Y+  ID F   G +D A + F  +  +G   + V+Y +
Sbjct: 227 MEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTS 286

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK   + E+  L+ +M ++   P    YNT+  G     + + A KL + ++   
Sbjct: 287 MVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERG 346

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 ++N+ +  L K   + EA  LF  ++    +  I  Y+ +ID LC  G++  A+
Sbjct: 347 CIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAY 405

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   GL PN+++ NIM+   C   Q+++AH +F     +G  PN VT+ +L+ G 
Sbjct: 406 KIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGL 465

Query: 241 IRNNETSKVVELLHRM 256
            +  +      L  +M
Sbjct: 466 GKKGKIDDAYRLFEKM 481



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 98/179 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ M+++G+ PN + +++L+D    T EID A   F SM    C  N  TY+ 
Sbjct: 681 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSI 740

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+ +   ++   + EM  +G+ P VVTY T+  GL ++  +  A  LF+  + + 
Sbjct: 741 LINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNG 800

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
              +++++N  I+G+      +EA ++F   R+  C L ++    L+D L K   LE A
Sbjct: 801 GIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 4/202 (1%)

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            L+    +++ +E++  +   M     RP    Y  L   L E  Q E AL+L  +MQ  
Sbjct: 146 ALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQ-- 203

Query: 120 DVAAETST--YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           DV  E S   + T +  L + G +  A  L   ++    E  I  Y+  ID   K G ++
Sbjct: 204 DVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVD 263

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            AW+ F  L   GL P+ V+Y  M+   C  G++ +A +LF  MEA+   P    +NT++
Sbjct: 264 MAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMI 323

Query: 238 LGCIRNNETSKVVELLHRMDER 259
           +G           +LL R+ ER
Sbjct: 324 MGYGSAERFDDAYKLLERLRER 345



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 4/252 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R++  M     RP    Y+ LI       + +RA EL   M   G   +V  + T
Sbjct: 157 LEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTT 216

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+    +   +E +L L  E+    + P +V YN       +   V+ A K F E++   
Sbjct: 217 LVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHG 276

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y + +  LCK G + EA ELF  +   +      AY+ +I G     + + A+
Sbjct: 277 LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAY 336

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM-LG 239
           +L + L   G +P+VV++N ++       ++D+A  LF D+  K   PN  T+N ++ + 
Sbjct: 337 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDML 395

Query: 240 CI--RNNETSKV 249
           C+  R NE  K+
Sbjct: 396 CMAGRVNEAYKI 407



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA      M +    PN + YS LI+G C   + ++A   +  M   G + NVVTY T
Sbjct: 716 IDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTT 775

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K  ++ ++ +L+    + G  P   ++N L  G+   ++   A ++F+E +   
Sbjct: 776 MISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRG 835

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAA 145
                 T  + +D L K   + +AA
Sbjct: 836 CRLNVKTCISLLDALNKTECLEQAA 860


>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 373

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 139/256 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + +LM Q G   ++  Y  L+DGFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   ++E++++ + M+  G  P    YNTL +G   + + + A+++F EM  ++
Sbjct: 135 MINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTN 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCK     EA +L + +     +  +  YS L+ GLC+  K+E A 
Sbjct: 195 CSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   GL P+V   NI+IHG C+ G+   A  L+ DM     APN VT NTLM G 
Sbjct: 255 QLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALGIWARI 330



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 128/229 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ MI+ G  PNA VY+TLI+GF    + D A  +F  M    C   VVTYNT
Sbjct: 145 LDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ +L  EML KG +P V+TY+ L  GL + H+VE AL+L++++  + 
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +    N  I GLC  G    A  L+  +    C   +  ++ L++G  K G +  A 
Sbjct: 265 LKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            ++  + R GL P++V+YNI + G C+  ++  A     D  AK +AP+
Sbjct: 325 GIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPS 373



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 125/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++ R+L +  ++G   +AF YS +I+G C   ++D A  +   M  NG   N   YNT
Sbjct: 110 INKSLRVLGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+      ++++ ++ EM S    PTVVTYNTL +GL +  +   A  L  EM    
Sbjct: 170 LINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  + GLC+   +  A +L+  +     +  ++  + LI GLC +GK + A 
Sbjct: 230 WKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L+  + R    PN+VT+N ++ GF  DG +  A  ++  +   G+ P+ V++N  + G
Sbjct: 290 MLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKG 348



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 121/229 (52%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  M  +    + V YN ++NG+ +   +++ + L+ E++ +     V
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREDSQNV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           V++N +  GLF    V+ A+ +++ M  S    +++TY   +DG CKNGYI ++  +   
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGI 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK  KL+ A  +   + + G  PN   YN +I+GF    +
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            D A  +F +M +   +P  VT+NTL+ G  +    ++  +L+  M E+
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEK 228


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 132/254 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M + GV PN + Y+ LI  +C TGE +RAR LF  M + G + NVV+YNTLI G C
Sbjct: 95  LFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLC 154

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   + ++  L   M ++G RP+++T+N L  G  +  ++ +AL  F++M+ +       
Sbjct: 155 RHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAV 214

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G C+   +  A      ++    E     Y+ LID   +   +  A+E+   +
Sbjct: 215 TYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGM 274

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL  +  TY +++   C +G M  A  LF  M  KGV P+ V ++ ++ G  R   +
Sbjct: 275 EKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSS 334

Query: 247 SKVVELLHRMDERN 260
            K ++L+  M ++ 
Sbjct: 335 YKALKLIMEMRQKG 348



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 119/235 (50%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + L++G C  G++  AR +F  M + G   N VTY  L++GY      E+   L+ EM  
Sbjct: 42  TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G+ P + TYN L        + E A  LFDEM    +     +YNT I GLC++G + +
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           AA+L   +R       I  ++ L+DG  K GK+  A   F  +   G  P+ VTYN++I 
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           GFC    M +A+    DM+ +G+ P  VT+  L+    R N   K  E+L  M++
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 111/232 (47%), Gaps = 1/232 (0%)

Query: 30  FCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
            C  G++  A  +      +G    +V     L+NG CK  DV E+  ++ EM   G+ P
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
             VTY  L HG F   Q E    LF+EM+   V     TYN  I   C+ G    A  LF
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             + V      + +Y+ LI GLC+ GKL  A +L   +   G  P+++T+N+++ G+   
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G+M  A   F  M+A G  P+ VT+N L+ G  R  + ++    L  M ER 
Sbjct: 192 GKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 117/258 (45%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+ D M   G+ PN   Y+ L+ G+   G+ ++   LF  M   G   N+ TYN LI
Sbjct: 56  EARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLI 115

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +C+T + E + +L+ EM  +GI   VV+YNTL  GL    ++  A KL D M+     
Sbjct: 116 GEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTR 175

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +DG  K G +  A   F  ++    +     Y+ LI G C+   +  A   
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   GL P  VTY I+I  F  +  M KA ++   ME  G+  +  T+  L+     
Sbjct: 236 LSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCM 295

Query: 243 NNETSKVVELLHRMDERN 260
                   +L   M E+ 
Sbjct: 296 EGNMKDARKLFQSMGEKG 313



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 74/159 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A+R L  M +RG+ P    Y+ LID F     + +A E+   M+  G   +  TY  
Sbjct: 229 MTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGV 288

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C   +++++  L+  M  KG+ P+ V Y+ + +G         ALKL  EM+   
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKG 348

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
           +   +++Y   I  LCK+    EA  L   +  ++   G
Sbjct: 349 LIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIRSFAG 387



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 81/222 (36%), Gaps = 35/222 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A    + M   G +P+A  Y+ LI GFC   ++ RA      M   G     VTY  
Sbjct: 194 MSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTI 253

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + +   + ++  + + M   G+     TY  L   L     ++ A KLF  M    
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      Y+  I G  + G   +A +L   +R                            
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMR---------------------------- 345

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
                  + GL+PN  +Y + I   C D +  +A  L  DME
Sbjct: 346 -------QKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 132/254 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M + GV PN + Y+ LI  +C TGE +RAR LF  M + G + NVV+YNTLI G C
Sbjct: 95  LFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLC 154

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   + ++  L   M ++G RP+++T+N L  G  +  ++ +AL  F++M+ +       
Sbjct: 155 RHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAV 214

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G C+   +  A      ++    E     Y+ LID   +   +  A+E+   +
Sbjct: 215 TYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGM 274

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL  +  TY +++   C +G M  A  LF  M  KGV P+ V ++ ++ G  R   +
Sbjct: 275 EKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSS 334

Query: 247 SKVVELLHRMDERN 260
            K ++L+  M ++ 
Sbjct: 335 YKALKLIMEMRQKG 348



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 119/235 (50%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + L++G C  G++  AR +F  M + G   N VTY  L++GY      E+   L+ EM  
Sbjct: 42  TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G+ P + TYN L        + E A  LFDEM    +     +YNT I GLC++G + +
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           AA+L   +R       I  ++ L+DG  K GK+  A   F  +   G  P+ VTYN++I 
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           GFC    M +A+    DM+ +G+ P  VT+  L+    R N   K  E+L  M++
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 111/232 (47%), Gaps = 1/232 (0%)

Query: 30  FCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
            C  G++  A  +      +G    +V     L+NG CK  DV E+  ++ EM   G+ P
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
             VTY  L HG F   Q E    LF+EM+   V     TYN  I   C+ G    A  LF
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             + V      + +Y+ LI GLC+ GKL  A +L   +   G  P+++T+N+++ G+   
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G+M  A   F  M+A G  P+ VT+N L+ G  R  + ++    L  M ER 
Sbjct: 192 GKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 117/258 (45%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+ D M   G+ PN   Y+ L+ G+   G+ ++   LF  M   G   N+ TYN LI
Sbjct: 56  EARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLI 115

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +C+T + E + +L+ EM  +GI   VV+YNTL  GL    ++  A KL D M+     
Sbjct: 116 GEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTR 175

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +DG  K G +  A   F  ++    +     Y+ LI G C+   +  A   
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   GL P  VTY I+I  F  +  M KA ++   ME  G+  +  T+  L+     
Sbjct: 236 LSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCM 295

Query: 243 NNETSKVVELLHRMDERN 260
                   +L   M E+ 
Sbjct: 296 EGNMKDARKLFQSMGEKG 313



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 74/159 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A+R L  M +RG+ P    Y+ LID F     + +A E+   M+  G   +  TY  
Sbjct: 229 MTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGV 288

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C   +++++  L+  M  KG+ P+ V Y+ + +G         ALKL  EM+   
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKG 348

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
           +   +++Y   I  LCK+    EA  L   +  ++   G
Sbjct: 349 LIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIRSFAG 387



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 81/222 (36%), Gaps = 35/222 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A    + M   G +P+A  Y+ LI GFC   ++ RA      M   G     VTY  
Sbjct: 194 MSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTI 253

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + +   + ++  + + M   G+     TY  L   L     ++ A KLF  M    
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      Y+  I G  + G   +A +L   +R                            
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMR---------------------------- 345

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
                  + GL+PN  +Y + I   C D +  +A  L  DME
Sbjct: 346 -------QKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 132/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA   L  M++ G++PNAF Y   I G+    E   A +    M   G + N V    
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YCK   V E+ + Y  M+ +GI     TY  L +GLF+  +V+ A ++F EM+   
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  +Y   I+G  K G + +A+ +F  +        +  Y+ L+ G C+ G++E A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL PN VTY  +I G+C  G + +A  LF +M+ KG+ P+   + TL+ GC
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 241 IRNNETSKVVELL 253
            R N+  + + + 
Sbjct: 743 CRLNDVERAITIF 755



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 144/266 (54%), Gaps = 9/266 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +AS + D M++ G+ PN  +Y+ L+ GFC +GEI++A+EL   M + G   N VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK+ D+ E+  L+ EM  KG+ P    Y TL  G   ++ VE A+ +F   +   
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG- 761

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIG 174
            A+ T+ +N  I+ + K G      E+   L      R  K       Y+ +ID LCK G
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN--DVTYNIMIDYLCKEG 819

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            LE A ELF  +    LMP V+TY  +++G+   G+  +   +F +  A G+ P+ + ++
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            ++   ++   T+K + L+ +M  +N
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKN 905



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 129/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R+L  M ++G+ P+ F Y++LI G      +D AR   V M  NG   N  TY   I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY +  +   +     EM   G+ P  V    L +   +  +V  A   +  M    + 
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   ++GL KN  + +A E+FR +R       + +Y  LI+G  K+G ++ A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   GL PNV+ YN+++ GFC  G+++KA +L  +M  KG+ PN VT+ T++ G  +
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 243 NNETSKVVELLHRM 256
           + + ++   L   M
Sbjct: 710 SGDLAEAFRLFDEM 723



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++  MI  G RPN  +Y+TLI  F        A  +   M   G   ++  YN+
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  K K ++E+ +   EM+  G++P   TY     G  E  +   A K   EM+   
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETA 179
           V          I+  CK G ++EA   +R++ V +  LG  + Y+ L++GL K  K++ A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+F+ +   G+ P+V +Y ++I+GF   G M KA  +F +M  +G+ PN + +N L+ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 240 CIRNNETSKVVELLHRM 256
             R+ E  K  ELL  M
Sbjct: 672 FCRSGEIEKAKELLDEM 688



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 7/244 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M  +G+ P+ F Y  LI+GF   G + +A  +F  M   G   NV+ YN 
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++ ++E++  L  EM  KG+ P  VTY T+  G  +   +  A +LFDEM+   
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++  Y T +DG C+   +  A  +F T +   C      ++ LI+ + K GK E   
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKT 786

Query: 181 ELFQ-----SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           E+       S  R G  PN VTYNIMI   C +G ++ A +LF  M+   + P  +T+ +
Sbjct: 787 EVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845

Query: 236 LMLG 239
           L+ G
Sbjct: 846 LLNG 849



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 37/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  L D MI  G+ P A  Y++LI+G+C    + +  EL V M     + +  TY T
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G C + D++ + N+  EM++ G RP VV Y TL     +  +   A+++  EM+   
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 121 VAAETSTYNTFIDGLCK------------------------------NGYIVEAAELFRT 150
           +A +   YN+ I GL K                              +GYI EA+E    
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI-EASEFASA 541

Query: 151 LRVLK--CELGIEAYSCLIDGL----CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            + +K   E G+     L  GL    CK GK+  A   ++S+   G++ +  TY ++++G
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
              + ++D A ++F +M  KG+AP+  ++  L+ G  +     K   +   M E
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 124/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L + MI +G+ P  + Y  LIDG C    ++ A+ L V MD  G   +  TY+ 
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K ++ + +  L  EM+S GI      Y+     + +   +E A  LFD M  S 
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y + I+G C+   + +  EL   ++     +    Y  ++ G+C  G L+ A+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   G  PNVV Y  +I  F  + +   A  +  +M+ +G+AP+   +N+L++G 
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497

Query: 241 IRNNETSKVVELLHRMDE 258
            +     +    L  M E
Sbjct: 498 SKAKRMDEARSFLVEMVE 515



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 110/224 (49%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A +L  SM   G +    TY+ LI+G CK K +E++ +L  EM S G+     TY+ 
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L  GL +    + A  L  EM    +  +   Y+  I  + K G + +A  LF  +    
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                +AY+ LI+G C+   +   +EL   + +  ++ +  TY  ++ G C+ G +D A+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++  +M A G  PN V + TL+   ++N+     + +L  M E+
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 45/250 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH------- 53
           + EA RL D M  +G+ P++FVY+TL+DG C   +++RA  +F   +  GC         
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNA 771

Query: 54  --------------------------------NVVTYNTLINGYCKTKDVEESLNLYSEM 81
                                           N VTYN +I+  CK  ++E +  L+ +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            +  + PTV+TY +L +G  ++ +      +FDE   + +  +   Y+  I+   K G  
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891

Query: 142 VEAAELFRTLRVLK-----CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
            +A  L   +         C+L I     L+ G  K+G++E A ++ +++ R+  +P+  
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951

Query: 197 TYNIMIHGFC 206
           T   +I+  C
Sbjct: 952 TVIELINESC 961



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 21/267 (7%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   +  ++  L DG+   G I+ A  +F S      +  +     L++   +   ++  
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHG-------------LFEIHQ--------VEHALKLF 113
            ++Y  M+ + +   V TY+ L                LF+  +        V+ ALKL 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           + M    +     TY+  IDGLCK   + +A  L   +  L   L    YS LIDGL K 
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
              + A  L   +   G+      Y+  I     +G M+KA  LF  M A G+ P    +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
            +L+ G  R     +  ELL  M +RN
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRN 412


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 128/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   G++P+ + YS LI+G C   +++ A ELF  M  NG + N VT+ T
Sbjct: 187 LDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CKT  ++ ++  Y EML +G  P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A +  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++I+ FC  G +     L  +M+  G  P  VT
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ 
Sbjct: 152 MRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSV 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   + ++  L+ EM+  G+ P  VT+ TL  G  +   ++ A++ + EM    
Sbjct: 212 LINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+
Sbjct: 272 FSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF 331

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +  + + +  +  + V Y  +I G C +GQ   A  +  +M + G+ P+  T+  ++   
Sbjct: 332 KYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEF 391

Query: 241 IRNNETSKVVELLHRM 256
            +  +     +LL  M
Sbjct: 392 CKKGDVKMGSKLLKEM 407



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 128/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  GE+  A+ +F  +   G   +VV++NTL+NGY +  D
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGD 186

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M   GI+P V TY+ L +GL +  ++  A +LFDEM  + +     T+ T
Sbjct: 187 LDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTT 246

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK G I  A E ++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 247 LIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKG 306

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G ++ A      M  + +  + V +  L+ G  R  ++    
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAE 366

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 367 KMLREM 372



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++ E+   G+RP+VV++NTL +G   +  ++   +L   M 
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S +  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G ++
Sbjct: 199 GSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSID 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E ++ + R G  P+++TYN +I+G C +G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     +   RM + N
Sbjct: 319 DGSCKEGDLETAFKYKKRMIKEN 341



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS + + +++ +G  R + +V+S LI  +  +G +  A E F     +       T  
Sbjct: 46  DSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++  + K K  +     Y E+L  G   ++  +N L H   +  ++  A  +FDE+   
Sbjct: 106 KVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT ++G  + G + E   L   +     +  +  YS LI+GLCK  K+  A
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ELF  +   GL+PN VT+  +I G C  G +D A + + +M  +G +P+ +T+NTL+ G
Sbjct: 226 NELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  +  +L+  M
Sbjct: 286 LCKEGDLKQAQDLIDEM 302


>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
          Length = 346

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 138/259 (53%), Gaps = 6/259 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVT 57
           + EA+ LLD +    VR +A  Y+T++   C  G  DRA  L  +M +     C  N V+
Sbjct: 61  LGEATSLLDALPS--VR-DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           Y  L+   C  +  ++++ L   M S G+R  VVTY TL  GL +  +V+ A++L  EM 
Sbjct: 118 YTVLMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S +      Y++ + G CK+G   +  ++F  +     E  +  Y+ LID LCK+GK +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +   + R GL PNVVTYN++I+  C +G + +A  +   M  KGVAP+ VT+NTL+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 238 LGCIRNNETSKVVELLHRM 256
            G     E  + + LL  M
Sbjct: 298 KGLSDVLEMDEAMWLLEEM 316



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 11/222 (4%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM---LSKGIRPTVVTYNTLFHGLFE 102
           +D    + + V+YNT++   C+    + +  L   M        RP  V+Y  L   L  
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127

Query: 103 IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
             + + A+ L   M+ + V A+  TY T I GLC    + +A EL   +    CE GIE 
Sbjct: 128 DRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM----CESGIEP 183

Query: 163 ----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               YS L+ G CK G+ E   ++F  +   G+ P+VV Y  +I   C  G+  KAH + 
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             M  +G+ PN VT+N L+    +     + + +L +M E+ 
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 94/187 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  LL  M   GVR +   Y TLI G C   E+D+A EL   M  +G   NVV Y++L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + GYCK+   E+   ++ EM  KGI P VV Y  L   L ++ + + A  + D M    +
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  I+ +CK G + EA  + + +        +  Y+ LI GL  + +++ A  
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 182 LFQSLPR 188
           L + + R
Sbjct: 312 LLEEMVR 318


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 16/265 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L + M    + P+ + ++ L+D FC  G +  A+     M   G   +VVTYN+
Sbjct: 292 LKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNS 351

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ YC   +V ++ ++++ M  +G+   V +Y+ + +   +I  V+ A+KLF EM H  
Sbjct: 352 LMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQ 411

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAE----------------LFRTLRVLKCELGIEAYS 164
           +     TY++ IDGLCK+G I  A E                L R L+       +  Y+
Sbjct: 412 IFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYT 471

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDGLCK G+LE A  +F+ L   G    V TY +MIHGFCN G  D+A  L   M+  
Sbjct: 472 ILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDN 531

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKV 249
              PN VT+  ++     N+E  K 
Sbjct: 532 CCIPNAVTYEIIIRSLFDNDENDKA 556



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 128/233 (54%), Gaps = 16/233 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L +M+++G++P+   Y++L+D +CL  E+++A+ +F +M   G   NV +Y+ +I
Sbjct: 329 EAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMI 388

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM----QH 118
           N +CK K V++++ L+ EM  K I P V+TY++L  GL +  ++ +AL+L DEM    Q 
Sbjct: 389 NRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQ 448

Query: 119 SDVAAETS------------TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
            D+   T             TY   IDGLCK G + +A  +F  L V    + +  Y+ +
Sbjct: 449 PDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVM 508

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           I G C  G  + A  L   +     +PN VTY I+I    ++ + DKA + F+
Sbjct: 509 IHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFV 561



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 16/273 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L   M+ + + P+   Y+ LI+GFC+ G++  A  LF  M       +V T+N L
Sbjct: 258 NDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 317

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK   V+E+ N  + M+ +GI+P VVTYN+L      +++V  A  +F+ M H  V
Sbjct: 318 VDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGV 377

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A   +Y+  I+  CK   + +A +LF+ +   +    +  YS LIDGLCK G++  A E
Sbjct: 378 TANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALE 437

Query: 182 ----------------LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
                           L + L   G+ PN+ TY I+I G C  G+++ A ++F D+  KG
Sbjct: 438 LNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKG 497

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
                 T+  ++ G        + + LL +M +
Sbjct: 498 YNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKD 530



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 116/206 (56%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N+V YNT+I+  CK K   ++ +LYSEM+SK I P V TYN L +G   + +++ A+ LF
Sbjct: 240 NLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLF 299

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           ++M   ++  +  T+N  +D  CK G + EA      +     +  +  Y+ L+D  C +
Sbjct: 300 NKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLV 359

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            ++  A  +F ++   G+  NV +Y+IMI+ FC    +D+A  LF +M  K + PN +T+
Sbjct: 360 NEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITY 419

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           ++L+ G  ++   S  +EL   M +R
Sbjct: 420 SSLIDGLCKSGRISYALELNDEMHDR 445



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 183 FQSLPRVG---LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            Q L RV    L PN+V YN +I   C D   + A DL+ +M +K + P+  T+N L+ G
Sbjct: 226 LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALING 285

Query: 240 CIRNNETSKVVELLHRMDERN 260
                +    + L ++M   N
Sbjct: 286 FCIVGKLKDAIGLFNKMTSEN 306



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 37/78 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + ++ +G       Y+ +I GFC  G  D A  L   M  N C+ N VTY  
Sbjct: 483 LEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEI 542

Query: 61  LINGYCKTKDVEESLNLY 78
           +I       + +++ N +
Sbjct: 543 IIRSLFDNDENDKAENFF 560


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 129/246 (52%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEE 73
           G+ PN + Y T+I G+C  G +D A ++F  M   G      V YN LI GYC    ++ 
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L     M+ +G+  TV TYN L H LF   +   A +L +EM    +A +  TYN  I+
Sbjct: 236 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 295

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G CK G + +A E+F  +        +  Y+ LI  L K G+++   +LF    R G+ P
Sbjct: 296 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 355

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++V YN +I+     G +D+A ++  +ME K +AP+ VT+NTLM G        +  +L+
Sbjct: 356 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 415

Query: 254 HRMDER 259
             M ER
Sbjct: 416 DEMTER 421



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 127/245 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L++ M  +G+ P+ F Y+ LI+G C  G + +A E+F +M   G    VVTY  LI
Sbjct: 270 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 329

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               K   V+E+  L+ E + +GIRP +V YN L +       ++ A ++  EM+   +A
Sbjct: 330 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 389

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT + GLC  G + EA +L   +     +  +  Y+ LI G    G ++ A  +
Sbjct: 390 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 449

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P ++TYN +I G C +GQ D A ++  +M   G+ P+  T+ +L+ G   
Sbjct: 450 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 509

Query: 243 NNETS 247
            +E +
Sbjct: 510 EDERA 514



 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEID---------------------- 37
           +DEA ++ D M+ +G V+P A +Y+ LI G+C  G++D                      
Sbjct: 197 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 256

Query: 38  -------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
                         A EL   M   G   +V TYN LING+CK  +V+++L ++  M  +
Sbjct: 257 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+R TVVTY  L + L +  QV+   KLFDE     +  +   YN  I+    +G I  A
Sbjct: 317 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 376

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E+   +   +       Y+ L+ GLC +G+++ A +L   +   G+ P++VTYN +I G
Sbjct: 377 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 436

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +   G +  A  +  +M  KG  P  +T+N L+ G  +N +      ++  M E
Sbjct: 437 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 490



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 8/240 (3%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           ++ ++   C  G+  RA EL   M       N VTYNT+I G+C    V+ +L++  EM 
Sbjct: 117 FNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 172

Query: 83  SK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGY 140
            + GI P   TY T+  G  ++ +V+ A+K+FDEM    +V  E   YN  I G C  G 
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232

Query: 141 IVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
           + + A L+R   V +   + +  Y+ L+  L   G+   A+EL + +   GL P+V TYN
Sbjct: 233 L-DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           I+I+G C +G + KA ++F +M  +GV    VT+  L+    +  +  +  +L      R
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 82/135 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++  M ++ + P+   Y+TL+ G CL G +D AR+L   M   G   ++VTYNT
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY    DV+++L + +EM++KG  PT++TYN L  GL +  Q + A  +  EM  + 
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492

Query: 121 VAAETSTYNTFIDGL 135
           +  + STY + I+GL
Sbjct: 493 ITPDDSTYISLIEGL 507



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+      +    SL LYS M S  +  +  +     H L        A  LF +M  
Sbjct: 52  NLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS----LHPLLSALPSAPAFALFADMFR 107

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +   T+T+N  +  LC  G    A EL R +           Y+ +I G C  G+++ 
Sbjct: 108 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQA 163

Query: 179 AWELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTL 236
           A ++ + +  R G+ PN  TY  +I G+C  G++D+A  +F +M  KG V P  V +N L
Sbjct: 164 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 223

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G     +    +    RM ER
Sbjct: 224 IGGYCDQGKLDTALLYRDRMVER 246


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 132/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL D M + G++PN + Y+ L+ G C   +++ A  L+  +  +G   N V + T
Sbjct: 237 IGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTT 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK K   E+  ++ EM   G+ PTV  YN+L  G F     + AL L+ EM    
Sbjct: 297 LIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLG 356

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T +  + GLC  G +  A    + ++     L   AY+ LID  C+IG LE A 
Sbjct: 357 LCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEAL 416

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +  VG+ PNVV+Y+ +I G    G+M  A  ++ +M AKG+ PN VT+  L+ G 
Sbjct: 417 ATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGH 476

Query: 241 IRNNETSKVVELLHRMDE 258
            +N        L   M E
Sbjct: 477 AKNGGIDAAFRLHKEMIE 494



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 131/253 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   +++ G+ PNA +++TLIDGFC       A+ +F+ M   G    V  YN+
Sbjct: 272 VNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNS 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  ++ + +E+L LY EM   G+ P   T + +  GL +  Q+  A +    +Q   
Sbjct: 332 LMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDG 391

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    + YN  ID  C+ G + EA      +  +  E  + +YS LIDG  K GK++ A 
Sbjct: 392 VNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAM 451

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            ++  +   G+ PNVVTY  +IHG   +G +D A  L  +M   G++PN +T + L+ G 
Sbjct: 452 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGL 511

Query: 241 IRNNETSKVVELL 253
            R N   + V  +
Sbjct: 512 CRENRVQEAVRFV 524



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 121/255 (47%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D M++RG+ P+   Y+TLI+     G + +A+E++  M       NVVTY T+I 
Sbjct: 170 AWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMIC 229

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C+   + ++  L+  M   G++P   TYN L  G  +   V  A+ L+ E+  S +  
Sbjct: 230 ALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNP 289

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               + T IDG CK     EA  +F  +        +  Y+ L+DG  + G  + A  L+
Sbjct: 290 NAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALY 349

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q + R+GL P+  T +I++ G C+ GQM  A      ++  GV  N   +N L+    R 
Sbjct: 350 QEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRI 409

Query: 244 NETSKVVELLHRMDE 258
               + +    RM E
Sbjct: 410 GNLEEALATCTRMTE 424



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 120/245 (48%), Gaps = 17/245 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A R L  + + GV  NA  Y+ LID +C  G ++ A      M   G   NVV+Y++
Sbjct: 377 MHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSS 436

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   ++ ++ +Y+EM++KGI P VVTY  L HG  +   ++ A +L  EM  + 
Sbjct: 437 LIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENG 496

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE--------LGIEA---------Y 163
           ++    T +  +DGLC+   + EA         LKC           IE          Y
Sbjct: 497 ISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIY 556

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
             LI GL   G+   A +LF  + + G++P+  TY ++I G C  G +  A  L+ DM  
Sbjct: 557 MTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMK 616

Query: 224 KGVAP 228
            GV P
Sbjct: 617 IGVKP 621



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 101/198 (51%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N +++G  K +    +  L+ EML +G+ P+VVTYNTL +       V  A +++D+M  
Sbjct: 155 NAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVA 214

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +     TY T I  LC+ G I +A  LF  ++    +     Y+ L+ G C+   + +
Sbjct: 215 QQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNS 274

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  L+Q L + GL PN V +  +I GFC   +  +A  +FL+M   GVAP    +N+LM 
Sbjct: 275 AVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMD 334

Query: 239 GCIRNNETSKVVELLHRM 256
           G  R+    + + L   M
Sbjct: 335 GAFRSGNAQEALALYQEM 352



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 4/218 (1%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + ++DG         A ELF  M   G + +VVTYNTLIN       V ++  ++ +M++
Sbjct: 155 NAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVA 214

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           + I P VVTY T+   L E   +  A +LFD M+ + +     TYN  + G C+   +  
Sbjct: 215 QQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNS 274

Query: 144 AAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
           A  L++ L  LK  L   A  ++ LIDG CK  +   A  +F  +PR G+ P V  YN +
Sbjct: 275 AVVLYQEL--LKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSL 332

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + G    G   +A  L+ +M   G+ P+  T + ++ G
Sbjct: 333 MDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRG 370



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 76/152 (50%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P +   N +  GL +  +   A +LFDEM    +     TYNT I+     G + +A E+
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           +  +   + +  +  Y+ +I  LC+ G +  A  LF ++   G+ PN  TYN+++ G C 
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              ++ A  L+ ++   G+ PN V F TL+ G
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDG 300



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 8/120 (6%)

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +  L + G + EA  +FR LR L     + A + ++DGL K  +   AWELF  + R G
Sbjct: 125 LVIALSQMGLLDEALYVFRRLRTLP---ALPACNAVLDGLVKARRPGCAWELFDEMLRRG 181

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML-----GCIRNNE 245
           L+P+VVTYN +I+     G + KA +++  M A+ + PN VT+ T++      GCI + E
Sbjct: 182 LVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAE 241



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 41/72 (56%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN+ +Y TLI G  L G+   A +LF  M  +G + +  TY  LI G C    V  ++ L
Sbjct: 551 PNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMML 610

Query: 78  YSEMLSKGIRPT 89
           Y++M+  G++PT
Sbjct: 611 YADMMKIGVKPT 622



 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           A   L+  L ++G L+ A  +F+   R+  +P +   N ++ G     +   A +LF +M
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFR---RLRTLPALPACNAVLDGLVKARRPGCAWELFDEM 177

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +G+ P+ VT+NTL+  C      +K  E+  +M
Sbjct: 178 LRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQM 212


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 134/243 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E +   + M++ G+  N   Y+ +ID FC T  +D+A   F  M   G   N+VT+NTLI
Sbjct: 445 EGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLI 504

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK  ++ +S +L   +L  G +P + T++++  GL    Q+E AL  F EM    ++
Sbjct: 505 DGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLS 564

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I  LC  G +  + +L R ++       + +++ LI   C++GK+E A +L
Sbjct: 565 PNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKL 624

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F S+  +GL+P+  TY   I  FC  G+ ++A +LFL MEA G  P+  T N ++   ++
Sbjct: 625 FSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVK 684

Query: 243 NNE 245
            ++
Sbjct: 685 QDQ 687



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 117/217 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A+     M  +G+ PN   ++TLIDG+C  GEI ++R+L V +  +G   ++ T+++
Sbjct: 478 MDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSS 537

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C+ K +E++L  +SEM+  G+ P  VTYN L H L  I  V  ++KL  +MQ   
Sbjct: 538 IIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDG 597

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++N  I   C+ G + +A +LF ++  L        Y   I   C+ G+   A 
Sbjct: 598 INPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAK 657

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           ELF S+   G MP+  T NI++       Q + A  +
Sbjct: 658 ELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKI 694



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 8/258 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYST----LIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           EA  LL    + G +P++  ++     LI GF L  E+    + FV     G      TY
Sbjct: 375 EAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLN-EVCNILDRFVE---QGMKFGFSTY 430

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
             LI        V E  + +++M+  G+   V +YN +     +   ++ A   F EMQ+
Sbjct: 431 LALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQY 490

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +     T+NT IDG CK G I ++ +L   L     +  I  +S +IDGLC+  ++E 
Sbjct: 491 KGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIED 550

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A   F  +   GL PN VTYNI+IH  C  G + ++  L   M+  G+ P+  +FN L+ 
Sbjct: 551 ALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQ 610

Query: 239 GCIRNNETSKVVELLHRM 256
              R  +     +L   M
Sbjct: 611 SFCRMGKVEDAKKLFSSM 628



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 118/256 (46%), Gaps = 6/256 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RL+  M   G  PN F Y+ LIDGF    ++D A  +  +M       +  T  +
Sbjct: 268 VDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRS 327

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA---LKLFDEMQ 117
            I+G  +     ++  L  E + +      +  +TL   L   +    A   LK F ++ 
Sbjct: 328 FIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIG 387

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           H     +++T+N  ++ L K   + E   +         + G   Y  LI  L   GK+ 
Sbjct: 388 HK---PDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVT 444

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                F  + + GL+ NV +YN++I  FC    MDKA + F +M+ KG+ PN VTFNTL+
Sbjct: 445 EGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLI 504

Query: 238 LGCIRNNETSKVVELL 253
            G  +  E  K  +LL
Sbjct: 505 DGYCKGGEICKSRDLL 520



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 8/197 (4%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P+  +Y+ +ID    +  +D A   F  M  + C  +  TYN LI+G C++  V+E+
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L  +M   G  P V TY  L  G F   +V+ A ++ + M+   V+   +T  +FI G
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLM 192
           + +     +A EL   +  ++ E  ++  +C  L+  L        A  L +   ++G  
Sbjct: 332 VFRCVAPNKAFEL--AIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHK 389

Query: 193 PNVVTYNI----MIHGF 205
           P+  T+NI    +I GF
Sbjct: 390 PDSATFNIAMNCLIKGF 406



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%)

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           ++F ++    ++  T  YN  ID L K+  +  A   F+ +    C+     Y+ LI G+
Sbjct: 203 EIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGV 262

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C+ G ++ A  L + +  +G  PNV TY I+I GF N  ++D+A  +   M+A+ V+P+ 
Sbjct: 263 CRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSE 322

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDER 259
            T  + + G  R    +K  EL     ER
Sbjct: 323 ATIRSFIHGVFRCVAPNKAFELAIEFIER 351



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 98/253 (38%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  +   G R N  +   LI  +   G      E+F  +   G   +   YN +I+   
Sbjct: 169 LLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALV 228

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K+  ++ +   + +M +   +P   TYN L HG+     V+ AL+L  +M+    +    
Sbjct: 229 KSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVF 288

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   IDG      + EA  +  T++  K           I G+ +      A+EL    
Sbjct: 289 TYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEF 348

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
                +   +  + ++    +     +A  L       G  P+  TFN  M   I+  + 
Sbjct: 349 IEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDL 408

Query: 247 SKVVELLHRMDER 259
           ++V  +L R  E+
Sbjct: 409 NEVCNILDRFVEQ 421



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 2/152 (1%)

Query: 108 HALKLFDEMQHSD--VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           + LK +  + + D   A + S      + L + G +V + EL + ++     +  E    
Sbjct: 128 YPLKFYIWVSNMDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCI 187

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           LI    ++G  +   E+F  +  +G+ P+   YN +I        +D A+  F  M A  
Sbjct: 188 LIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADN 247

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
             P+  T+N L+ G  R+    + + L+ +M+
Sbjct: 248 CKPDRFTYNILIHGVCRSGVVDEALRLVKQME 279


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 135/257 (52%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYN 59
           +D A  +   M   G  P+   Y+TLI+G C   E+ R  ELF  +     C  ++VTY 
Sbjct: 194 VDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYT 253

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++I+G+CK+  ++E+ NL+ EM+  GI+P V+T+N L  G  +I  +  A  ++ +M + 
Sbjct: 254 SIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYF 313

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           D +A+  T+ + IDG C+ G +    + +  ++       +  Y+ LI+ LCK  +L  A
Sbjct: 314 DCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEA 373

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +    +    ++P    YN +I GFC  G +D+ + +  +ME K   P+ VTF  L++G
Sbjct: 374 RDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIG 433

Query: 240 CIRNNETSKVVELLHRM 256
                   + + + +RM
Sbjct: 434 HCVKGRMFEAINIFNRM 450



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 129/243 (53%), Gaps = 1/243 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+ + ++ LI G C  G +DRA E+F  M+  GC+ +VVTYNTLING CK  +V+    L
Sbjct: 176 PDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCEL 235

Query: 78  YSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           + E+ S+    P +VTY ++  G  +  +++ A  LF+EM  S +     T+N  IDG  
Sbjct: 236 FKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFG 295

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G I EA  ++R +    C   +  ++ LIDG C+ G++    + +  +    + P V 
Sbjct: 296 KIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVY 355

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY ++I+  C + ++++A D    ++   + P    +N ++ G  +     +   +L  M
Sbjct: 356 TYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEM 415

Query: 257 DER 259
           +E+
Sbjct: 416 EEK 418



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D  + + D M   G  P++ +   L+       + D  ++L   +       N   YN L
Sbjct: 90  DLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNL 149

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   K   V E++ L+ E L     P   T+N L  GL  +  V+ A ++F +M+    
Sbjct: 150 LSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGC 209

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAW 180
             +  TYNT I+GLCK   +    ELF+ ++    C   I  Y+ +I G CK GK++ A 
Sbjct: 210 LPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEAS 269

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + R G+ PNV+T+N++I GF   G + +A  ++  M     + + VTF +L+ G 
Sbjct: 270 NLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGY 329

Query: 241 IRNNETSKVVELLHRMDERN 260
            R  + +  ++  + M  RN
Sbjct: 330 CRAGQVNHGLKFWNVMKTRN 349



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 111/217 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EAS L + M++ G++PN   ++ LIDGF   G I  A  ++  M    C  +VVT+ +
Sbjct: 265 MKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTS 324

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC+   V   L  ++ M ++ + PTV TY  L + L + +++  A     ++++S 
Sbjct: 325 LIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSS 384

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  IDG CK G + E   + + +   +C+     ++ LI G C  G++  A 
Sbjct: 385 IIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAI 444

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
            +F  +      P+ +T N +I      G  ++A+ +
Sbjct: 445 NIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 1/218 (0%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ L+   C  G  D    +F  M  +G + +      L+    +  D +    L +E+ 
Sbjct: 76  YNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQ 135

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            K +R     YN L   L + +QV  A+ LF E        +T T+N  I GLC+ G + 
Sbjct: 136 GKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVD 195

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL-PRVGLMPNVVTYNIM 201
            A E+F+ +    C   +  Y+ LI+GLCK  +++   ELF+ +  R    P++VTY  +
Sbjct: 196 RAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSI 255

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           I GFC  G+M +A +LF +M   G+ PN +TFN L+ G
Sbjct: 256 ISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDG 293



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 107/214 (50%), Gaps = 4/214 (1%)

Query: 44  VSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI 103
           +++++N C     TYN L+   C+    +    ++  M S G  P       L   + + 
Sbjct: 65  LNLNVNHCYS---TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQA 121

Query: 104 HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
              +   KL  E+Q  +V   +  YN  +  L K   + EA  LF+   V++       +
Sbjct: 122 SDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTF 181

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + LI GLC++G ++ A+E+F+ +   G +P+VVTYN +I+G C   ++ +  +LF ++++
Sbjct: 182 NILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQS 241

Query: 224 KG-VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   +P+ VT+ +++ G  ++ +  +   L   M
Sbjct: 242 RSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEM 275


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 134/290 (46%), Gaps = 35/290 (12%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++ + M+  G+ P+ + YSTLI+ +C   E D A+++ V M   GC  N VTYN LI G 
Sbjct: 103 KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 162

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C++  VEE+     +M   G+ P   TY  L +GL +  +   A  L DEM  +++    
Sbjct: 163 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 222

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             Y   IDG  + G   EA ++ + +     +     Y  L+ GLCK+G+++ A  L + 
Sbjct: 223 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 282

Query: 186 LPR-----------------------------------VGLMPNVVTYNIMIHGFCNDGQ 210
           + R                                    G+ PNV TY+IMIHG C  G+
Sbjct: 283 MVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 342

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +KA DL  +M  KG+ PN   +  L+ G  R    S   E+  +M + N
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 392



 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 136/255 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  LLD M    ++PN  VY+ LIDGF   G  D A ++   M   G   N +TY+ L
Sbjct: 204 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 263

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G CK   ++ +  L  +M+    RP  +TYN +  G F  H  + A +L  EM+++ +
Sbjct: 264 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGI 323

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    TY+  I GLC++G   +A++L   +     +     Y+ LI G C+ G +  A E
Sbjct: 324 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACE 383

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + +V ++P++  YN +I G    G+++++   F  M+ +G+ PN  T++ L+ G +
Sbjct: 384 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 443

Query: 242 RNNETSKVVELLHRM 256
           +N +     +L+ RM
Sbjct: 444 KNGDLESAEQLVQRM 458



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 131/255 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA +++  M+  GV+PN   Y  L+ G C  G++DRA  L   M  +    + +TYN +
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+ +  + +++  L SEM + GI P V TY+ + HGL +  + E A  L +EM    +
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 358

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 Y   I G C+ G +  A E+F  +  +     +  Y+ LI GL K+G++E + +
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  +   GL+PN  TY+ +IHG+  +G ++ A  L   M   G+ PN V +  L+    
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478

Query: 242 RNNETSKVVELLHRM 256
           ++++  KV      M
Sbjct: 479 KSDDIEKVSSTFKSM 493



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 35/290 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++AS LL+ M  +G++PNAFVY+ LI G+C  G +  A E+F  M     + ++  YN+L
Sbjct: 344 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 403

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM----- 116
           I G  K   VEES   +++M  +G+ P   TY+ L HG  +   +E A +L   M     
Sbjct: 404 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463

Query: 117 ---------------QHSDVAAETSTYNTFID---------------GLCKNGYIVEAAE 146
                          +  D+   +ST+ + +D                L  +G +  A  
Sbjct: 464 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +   +        +  YS LI GLCK    E A+ +   + + G+ PN+V YN +I G C
Sbjct: 524 VLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 583

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G +  A ++F  + AKG+ PNCVT+ +L+ G  +  + S    L + M
Sbjct: 584 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 633



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 127/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E+++    M +RG+ PN F YS LI G+   G+++ A +L   M   G   N V Y  
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  Y K+ D+E+  + +  ML +G+      Y  L H L     +E A ++  E++ + 
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNG 532

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y++ I GLCK     +A  +   +     +  I  Y+ LIDGLCK G +  A 
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F S+   GL+PN VTY  +I G C  G +  A  L+ +M A G+ P+   ++ L  GC
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652

Query: 241 IRNNETSKVVELLHRM 256
               +  + + L+  M
Sbjct: 653 SSAGDLEQAMFLIEEM 668



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 1/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A R+L  + + G  P+  VYS+LI G C T + ++A  +   M   G   N+V YN 
Sbjct: 518 MEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 577

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+ D+  + N+++ +L+KG+ P  VTY +L  G  ++  + +A  L++EM  + 
Sbjct: 578 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 637

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+    G    G + +A  L   +  L+    I +++ L+DG CK GK++   
Sbjct: 638 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETL 696

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL+PN +T   +I G    G++ + H +F++++ K        F++L +  
Sbjct: 697 KLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDM 756

Query: 241 IRNNE 245
           I   +
Sbjct: 757 INQGK 761



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 125/257 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RLL  M   G+ PN + YS +I G C +GE ++A +L   M   G   N   Y  LI
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 369

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+  +V  +  ++ +M    + P +  YN+L  GL ++ +VE + K F +MQ   + 
Sbjct: 370 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 429

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  I G  KNG +  A +L + +     +     Y  L++   K   +E     
Sbjct: 430 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 489

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+S+   G+M +   Y I+IH   + G M+ A  +  ++E  G  P+   +++L+ G  +
Sbjct: 490 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCK 549

Query: 243 NNETSKVVELLHRMDER 259
             +  K   +L  M ++
Sbjct: 550 TADREKAFGILDEMSKK 566



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 139/283 (49%), Gaps = 33/283 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  +LD M ++GV PN   Y+ LIDG C +G+I  AR +F S+   G + N VTY +L
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QH 118
           I+G CK  D+  +  LY+EML+ GI P    Y+ L  G      +E A+ L +EM    H
Sbjct: 614 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH 673

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR---VLKCELGIEAYSCLIDGLCKIGK 175
           + +    S++N  +DG CK G + E  +L   +    ++   L IE    +I GL + GK
Sbjct: 674 ASI----SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN---IISGLSEAGK 726

Query: 176 L---------------ETAWELFQSL----PRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           L               E+A   F SL       G +P  V  + MI   C +G +DKA  
Sbjct: 727 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKALM 785

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L   + AK     C ++  ++    R  + S+ + LL  MD+R
Sbjct: 786 LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 828



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 1/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +L+  M+  G++PN  +Y  L++ +  + +I++    F SM   G M +   Y  
Sbjct: 448 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 507

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+    + ++E +  + SE+   G  P V  Y++L  GL +    E A  + DEM    
Sbjct: 508 LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      YN  IDGLCK+G I  A  +F ++           Y+ LIDG CK+G +  A+
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 627

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +   G+ P+   Y+++  G  + G +++A  L  +M  +G A +  +FN L+ G 
Sbjct: 628 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGF 686

Query: 241 IRNNETSKVVELLH 254
            +  +  + ++LLH
Sbjct: 687 CKRGKMQETLKLLH 700



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 127/263 (48%), Gaps = 12/263 (4%)

Query: 1   MDEASRLLDLMIQRGVRP-----NAFVYSTL-IDGFCLTGEIDRARELFVSMDINGCMHN 54
           + +A+ ++ +M  RG+ P     NA +   L  D   L  ++   RE  V   I+    +
Sbjct: 63  VQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKV---REFMVGAGIS---PD 116

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           V TY+TLI  YCK ++ + +  +  EM  +G     VTYN L  GL     VE A     
Sbjct: 117 VYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK 176

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           +M+   +  +  TY   I+GLCK+    EA  L   +   + +  +  Y+ LIDG  + G
Sbjct: 177 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG 236

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
             + A+++ + +   G+ PN +TY+ ++ G C  GQMD+A  L   M      P+ +T+N
Sbjct: 237 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 296

Query: 235 TLMLGCIRNNETSKVVELLHRMD 257
            ++ G  R++       LL  M+
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEME 319



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 5/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++ S     M+ +GV  +  +Y  LI     +G ++ A  +   ++ NG + +V  Y++
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CKT D E++  +  EM  KG+ P +V YN L  GL +   + +A  +F+ +    
Sbjct: 543 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + IDG CK G I  A  L+  +           YS L  G    G LE A 
Sbjct: 603 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 662

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G   ++ ++N ++ GFC  G+M +   L   +  +G+ PN +T   ++ G 
Sbjct: 663 FLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 721

Query: 241 IRNNETSKV----VELLHRMDE 258
               + S+V    VEL  +  E
Sbjct: 722 SEAGKLSEVHTIFVELQQKTSE 743



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 95/198 (47%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           + L++ Y K+  V+++  +   M  +G+ P++   N L   L     +    K+ + M  
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + ++ +  TY+T I+  CK      A ++   +R   C L    Y+ LI GLC+ G +E 
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A+   + +   GL+P+  TY  +I+G C   + ++A  L  +M    + PN V +  L+ 
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 239 GCIRNNETSKVVELLHRM 256
           G +R     +  +++  M
Sbjct: 231 GFMREGNADEAFKMIKEM 248



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 20/216 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  L + M+  G+ P+AFVYS L  G    G++++A  L   M + G   ++ ++N 
Sbjct: 623 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNN 681

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   ++E+L L   ++ +G+ P  +T   +  GL E  ++     +F E+Q   
Sbjct: 682 LVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKT 741

Query: 121 VAAETSTYNT-FIDGL-----------------CKNGYIVEAAELFRTLRVLKCELGIEA 162
             +    +++ F+D +                 CK G + +A  L   +      +G  +
Sbjct: 742 SESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSS 801

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVG-LMPNVVT 197
           Y  ++D LC+ GKL  A  L + + + G L P +V 
Sbjct: 802 YLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 61/130 (46%)

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           +  +D   K+G + +AAE+   +R       I   + L+  L +   +   W++ + +  
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G+ P+V TY+ +I  +C   + D A  + ++M  +G   N VT+N L+ G  R+    +
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170

Query: 249 VVELLHRMDE 258
                  M++
Sbjct: 171 AFGFKKDMED 180


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 143/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RLLD M++ G++ N F+ ++LI+G+C  GEI  A  +   M       +  +YNT
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC+     E+ NL  +ML +GI PTV+TYNTL  GL  +   + AL+++  M    
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +   Y+T +DGL K      A+ L++ +           ++ +I GLCK+GK+  A 
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +  +G  P+ +TY  +I G+C    + +A  +   ME + ++P+   +N+L+ G 
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587

Query: 241 IRNNETSKVVELLHRMDER 259
            ++    +  +LL  M  R
Sbjct: 588 FKSRRLVEXTDLLTEMGIR 606



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 137/258 (53%), Gaps = 10/258 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M+Q G+ P    Y+TL+ G C  G  D A +++  M   G   + V Y+TL+
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLL 479

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K ++ E +  L+ ++L++G   + +T+NT+  GL ++ ++  A ++FD+M+    +
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T IDG CK   + +A ++   +        IE Y+ LI GL K  +L    +L
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDL 599

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   GL PN+VTY  +I G+C +G +DKA   + +M   G++ N +  +T++ G  R
Sbjct: 600 LTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYR 659

Query: 243 NNETSKVVELLHRMDERN 260
                     L R+DE N
Sbjct: 660 ----------LGRIDEAN 667



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 1/247 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+ G+ P+ F+ S +++ FC  G++D A      M+  G   N+VTY++LINGY    D
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HSDVAAETSTYN 129
           VE +  +   M  KG+   VVTY  L  G  +  +++ A K+   MQ  + +  +   Y 
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             IDG C+ G I +A  L   +  L  +  +   + LI+G CK G++  A  +   +   
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            L P+  +YN ++ G+C +G   +A +L   M  +G+ P  +T+NTL+ G  R       
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 250 VELLHRM 256
           +++ H M
Sbjct: 457 LQIWHLM 463



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 121/243 (49%), Gaps = 1/243 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+  +  M   GV PN   Y +LI+G+   G+++ A+ +   M   G   NVVTY  
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301

Query: 61  LINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI GYCK   ++E+  +   M  +  + P    Y  L  G     +++ A++L DEM   
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 361

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +       N+ I+G CK G I EA  +   +     +    +Y+ L+DG C+ G    A
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L   + + G+ P V+TYN ++ G C  G  D A  ++  M   GVAP+ V ++TL+ G
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDG 481

Query: 240 CIR 242
             +
Sbjct: 482 LFK 484



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 126/282 (44%), Gaps = 35/282 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRA---------------RELFVSMDIN------ 49
           M + G+  N  + ST++ G    G ID A                E F+  DI       
Sbjct: 638 MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQK 697

Query: 50  -------GC----MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
                   C    + N + YN  I G CKT  V+++   +S +  KG  P   TY TL H
Sbjct: 698 IADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIH 757

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           G      V+ A +L DEM    +     TYN  I+GLCK+  +  A  LF  L       
Sbjct: 758 GYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 817

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  Y+ LIDG CKIG ++ A++L   +   G+ P+VVTY+ +I+G C  G ++++  L 
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLL 877

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRN---NETSKVVELLHRMD 257
             M   GV    + + TL+ G  +    NE SK   L   M+
Sbjct: 878 NQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMN 919



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 32/291 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + D M   G  P+   Y TLIDG+C    + +A ++  +M+      ++  YN+
Sbjct: 523 MVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNS 582

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K++ + E  +L +EM  +G+ P +VTY  L  G  +   ++ A   + EM  + 
Sbjct: 583 LISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 642

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR----------VLKCELGIEA-------- 162
           ++A     +T + GL + G I EA  L + +            LK ++   A        
Sbjct: 643 LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSL 702

Query: 163 --------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
                         Y+  I GLCK GK++ A   F  L   G +P+  TY  +IHG+   
Sbjct: 703 DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAA 762

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G +D+A  L  +M  +G+ PN VT+N L+ G  ++    +   L H++ ++
Sbjct: 763 GNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM-HNVVTYN 59
           ++ A  +L  M ++GV  N   Y+ LI G+C   ++D A ++   M     +  +   Y 
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+GYC+T  +++++ L  EML  G++  +   N+L +G  +  ++  A  +   M   
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++  ++ +YNT +DG C+ G+  EA  L   +     E  +  Y+ L+ GLC++G  + A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +++  + + G+ P+ V Y+ ++ G       + A  L+ D+ A+G   + +TFNT++ G
Sbjct: 457 LQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  +  +  E+  +M +
Sbjct: 517 LCKMGKMVEAEEIFDKMKD 535



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 113/228 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++  LM++ GV P+   YSTL+DG       + A  L+  +   G   + +T+NT+
Sbjct: 454 DDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G CK   + E+  ++ +M   G  P  +TY TL  G  +   V  A K+   M+   +
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXI 573

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +     YN+ I GL K+  +VE  +L   + +      I  Y  LIDG CK G L+ A+ 
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            +  +   GL  N++  + M+ G    G++D+A+ L   M   G  P+
Sbjct: 634 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + D M + G  P+    ++L++     GE   A  ++  M   G + +V   + ++N +C
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 237

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   V+E+     +M + G+ P +VTY++L +G   +  VE A  +   M    V+    
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIGKLETAWELFQS 185
           TY   I G CK   + EA ++ R ++     +  E AY  LIDG C+ GK++ A  L   
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + R+GL  N+   N +I+G+C  G++ +A  +   M    + P+  ++NTL+ G  R   
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 246 TSKVVELLHRM 256
           TS+   L  +M
Sbjct: 418 TSEAFNLCDKM 428



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 1/200 (0%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           ++ ++  Y +    + +L ++  M   G  P++ + N+L + L +  +   A  ++ +M 
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +  +    +  ++  CK+G + EAA   + +  L  E  I  Y  LI+G   +G +E
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTL 236
            A  + + +   G+  NVVTY ++I G+C   +MD+A  +   M E   + P+   +  L
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G  R  +    V LL  M
Sbjct: 339 IDGYCRTGKIDDAVRLLDEM 358



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           V+  ++  +   G    A  +F +M   G + ++ + N+L+N   K  +   +  +Y +M
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           +  GI P V   + + +   +  +V+ A     +M++  V     TY++ I+G    G +
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP-RVGLMPNVVTYNI 200
             A  + + +        +  Y+ LI G CK  K++ A ++ + +     L+P+   Y +
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +I G+C  G++D A  L  +M   G+  N    N+L+ G  +  E  +   ++ RM + N
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 26/251 (10%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD-- 70
           Q+  RPN   Y  L+         D  R                  N L++  CK KD  
Sbjct: 95  QQNFRPNVKSYCKLVHILSRGRMYDETRAYL---------------NQLVD-LCKFKDRG 138

Query: 71  ---VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
               +E + +Y E       PTV  ++ +     E    ++AL +FD M          +
Sbjct: 139 NVIWDELVGVYREF---AFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRS 193

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
            N+ ++ L KNG    A  +++ +  +     +   S +++  CK GK++ A    + + 
Sbjct: 194 CNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME 253

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
            +G+ PN+VTY+ +I+G+ + G ++ A  +   M  KGV+ N VT+  L+ G  +  +  
Sbjct: 254 NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 313

Query: 248 KVVELLHRMDE 258
           +  ++L  M E
Sbjct: 314 EAEKVLRGMQE 324


>gi|255660978|gb|ACU25658.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 373

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L     + G+  YS L+ GLC    +E A 
Sbjct: 195 CSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMXGLCLDHXVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L  DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLXFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 118/214 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK K   E+ NL  E+L KG+ P V+TY+ L  GL   H VE AL+L++++    
Sbjct: 205 LINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMXGLCLDHXVERALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L   +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLXFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            ++  + R GL P++++YNI + G C+  ++  A
Sbjct: 325 VIWARILRNGLEPDIISYNITLEGLCSCNRISDA 358



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LDPGVITYSMLMXGLCLDHXVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLXFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 118/229 (51%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M S+G R +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ S    ++ TY   + G CKNGYI ++  +   
Sbjct: 60  SSFNXMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK   L+ A  +   + + G  PNV  YN +I+G     +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + A  +F +M     +P  +T+NTL+ G  +N    +   L+  + ++
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDK 228



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+   +++  V P+A VY+ +++G+    +I    EL+  M   G   +V ++N 
Sbjct: 6   IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNX 64

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      V+E ++++  M   G     +TY  L HG  +   ++ +L + +  +   
Sbjct: 65  MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  I+GLCK   +  A  +   +    C+  +  Y+ LI+GL    K E A 
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAI 184

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +  +   P ++TYN +I+G C +    +A++L  ++  KG+ P  +T++ LM G 
Sbjct: 185 RVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMXGL 244

Query: 241 IRNNETSKVVELLHRMDER 259
             ++   + ++L +++  +
Sbjct: 245 CLDHXVERALQLWNQVTSK 263


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 132/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA   L  M++ G++PNAF Y   I G+    E   A +    M   G + N V    
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YCK   V E+ + Y  M+ +GI     TY  L +GLF+  +V+ A ++F EM+   
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  +Y   I+G  K G + +A+ +F  +        +  Y+ L+ G C+ G++E A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL PN VTY  +I G+C  G + +A  LF +M+ KG+ P+   + TL+ GC
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 241 IRNNETSKVVELL 253
            R N+  + + + 
Sbjct: 743 CRLNDVERAITIF 755



 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 144/266 (54%), Gaps = 9/266 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +AS + D M++ G+ PN  +Y+ L+ GFC +GEI++A+EL   M + G   N VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK+ D+ E+  L+ EM  KG+ P    Y TL  G   ++ VE A+ +F   +   
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG- 761

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIG 174
            A+ T+ +N  I+ + K G      E+   L      R  K       Y+ +ID LCK G
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN--DVTYNIMIDYLCKEG 819

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            LE A ELF  +    LMP V+TY  +++G+   G+  +   +F +  A G+ P+ + ++
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            ++   ++   T+K + L+ +M  +N
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKN 905



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 129/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R+L  M ++G+ P+ F Y++LI G      +D AR   V M  NG   N  TY   I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY +  +   +     EM   G+ P  V    L +   +  +V  A   +  M    + 
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   ++GL KN  + +A E+FR +R       + +Y  LI+G  K+G ++ A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   GL PNV+ YN+++ GFC  G+++KA +L  +M  KG+ PN VT+ T++ G  +
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 243 NNETSKVVELLHRM 256
           + + ++   L   M
Sbjct: 710 SGDLAEAFRLFDEM 723



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 7/244 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M  +G+ P+ F Y  LI+GF   G + +A  +F  M   G   NV+ YN 
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++ ++E++  L  EM  KG+ P  VTY T+  G  +   +  A +LFDEM+   
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++  Y T +DG C+   +  A  +F T +   C      ++ LI+ + K GK E   
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKT 786

Query: 181 ELFQ-----SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           E+       S  R G  PN VTYNIMI   C +G ++ A +LF  M+   + P  +T+ +
Sbjct: 787 EVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845

Query: 236 LMLG 239
           L+ G
Sbjct: 846 LLNG 849



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++  MI  G RPN  +Y+TLI  F        A  +   M   G   ++  YN+
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  K K ++E+ +   EM+  G++P   TY     G  E  +   A K   EM+   
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETA 179
           V          I+  CK G ++EA   +R++ V +  LG  + Y+ L++GL K  K++ A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+F+ +   G+ P+V +Y ++I+GF   G M KA  +F +M  +G+ PN + +N L+ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 240 CIRNNETSKVVELLHRM 256
             R+ E  K  ELL  M
Sbjct: 672 FCRSGEIEKAKELLDEM 688



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 37/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  L D MI  G+ P A  Y++LI+G+C    + +  EL V M     + +  TY T
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G C + D++ + N+  EM++ G RP VV Y TL     +  +   A+++  EM+   
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 121 VAAETSTYNTFIDGLCK------------------------------NGYIVEAAELFRT 150
           +A +   YN+ I GL K                              +GYI EA+E    
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI-EASEFASA 541

Query: 151 LRVLK--CELGIEAYSCLIDGL----CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            + +K   E G+     L  GL    CK GK+  A   ++S+   G++ +  TY ++++G
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
              + ++D A ++F +M  KG+AP+  ++  L+ G  +     K   +   M E
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 124/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L + MI +G+ P  + Y  LIDG C    ++ A+ L V MD  G   +  TY+ 
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K ++ + +  L  EM+S GI      Y+     + +   +E A  LFD M  S 
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y + I+G C+   + +  EL   ++     +    Y  ++ G+C  G L+ A+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   G  PNVV Y  +I  F  + +   A  +  +M+ +G+AP+   +N+L++G 
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497

Query: 241 IRNNETSKVVELLHRMDE 258
            +     +    L  M E
Sbjct: 498 SKAKRMDEARSFLVEMVE 515



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 110/224 (49%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A +L  SM   G +    TY+ LI+G CK K +E++ +L  EM S G+     TY+ 
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L  GL +    + A  L  EM    +  +   Y+  I  + K G + +A  LF  +    
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                +AY+ LI+G C+   +   +EL   + +  ++ +  TY  ++ G C+ G +D A+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++  +M A G  PN V + TL+   ++N+     + +L  M E+
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 45/250 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH------- 53
           + EA RL D M  +G+ P++FVY+TL+DG C   +++RA  +F   +  GC         
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNA 771

Query: 54  --------------------------------NVVTYNTLINGYCKTKDVEESLNLYSEM 81
                                           N VTYN +I+  CK  ++E +  L+ +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            +  + PTV+TY +L +G  ++ +      +FDE   + +  +   Y+  I+   K G  
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891

Query: 142 VEAAELFRTLRVLK-----CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
            +A  L   +         C+L I     L+ G  K+G++E A ++ +++ R+  +P+  
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951

Query: 197 TYNIMIHGFC 206
           T   +I+  C
Sbjct: 952 TVIELINESC 961



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 100/236 (42%), Gaps = 14/236 (5%)

Query: 25  TLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
            L+D       +D   +++  M     + +V TY+ LI  +C+  +V+    L  ++L K
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ----LGKDVLFK 246

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
               T   + T          V+ ALKL + M    +     TY+  IDGLCK   + +A
Sbjct: 247 ----TEKEFRT------ATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             L   +  L   L    YS LIDGL K    + A  L   +   G+      Y+  I  
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              +G M+KA  LF  M A G+ P    + +L+ G  R     +  ELL  M +RN
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +    DG     YI EA  +F +   L+    +     L+D L +  +L+  W++++ + 
Sbjct: 154 FGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA---------------------KGV 226
              ++ +V TY+++I   C  G +    D+    E                      KG+
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
            P   T++ L+ G  +         LL  MD
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 138/252 (54%), Gaps = 4/252 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ PN   Y+ LI+  C+ G    A ++F  M+ +G + N  TYN +I G C   D
Sbjct: 406 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 465

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E+++ L+ +ML  G  PTVVTYNTL +G      V +A +L D M+ +    +  TYN 
Sbjct: 466 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 525

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPR 188
            + G  K G +  A+  F+ +  ++C L     +Y+ LIDG  K GK++ A  L + +  
Sbjct: 526 LVSGFSKWGKLESASFYFQEM--VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G  PNV +YN +I+G   + +  +A  +   M  +G+ PN +T+ TL+ G  RN  T  
Sbjct: 584 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQF 643

Query: 249 VVELLHRMDERN 260
             ++ H M++R 
Sbjct: 644 AFKIFHDMEKRK 655



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 129/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+RLLDLM + G  P+ + Y+ L+ GF   G+++ A   F  M   G   N V+Y T
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   V+ +L+L   M   G  P V +YN + +GL + ++   A K+ D+M    
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T IDGLC+NG    A ++F  +   KC   +  YS LI GLC+ GK + A 
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 680

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + + R GL P+ VT+  +I GF   G++D A  L   M   G  PN  T++ L+ G
Sbjct: 681 ILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG 739



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 127/256 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++   M   G   N   Y+ +I G CL G+I++A  LF  M   G +  VVTYNTLIN
Sbjct: 434 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 493

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY    +V  +  L   M   G  P   TYN L  G  +  ++E A   F EM    +  
Sbjct: 494 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 553

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y T IDG  K+G +  A  L   +  + C   +E+Y+ +I+GL K  +   A ++ 
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 613

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL+PNV+TY  +I G C +G+   A  +F DME +   PN  T+++L+ G  + 
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673

Query: 244 NETSKVVELLHRMDER 259
            +  +   LL  M+ +
Sbjct: 674 GKADEAEILLKEMERK 689



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 123/239 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + D M++ G  PN+  YSTLI+G C  G +D A ++   M   G    V TY  
Sbjct: 291 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 350

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I   C  +  EE++ L + M  +G RP V TY  L  GL  + ++E A+ L+ +M    
Sbjct: 351 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 410

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TYN  I+ LC  G    A ++F  +         + Y+ +I GLC  G +E A 
Sbjct: 411 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 470

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ + ++G +P VVTYN +I+G+   G ++ A  L   M+  G  P+  T+N L+ G
Sbjct: 471 VLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 529



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M+  G++P+   ++TLI+     G++  A  +   +       +V TY +
Sbjct: 221 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 280

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+ ++++ +  ++  M+ +G  P  VTY+TL +GL    +V+ AL + +EM    
Sbjct: 281 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 340

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I  LC   +  EA EL   ++   C   ++ Y+ LI GL ++GKLE A 
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 400

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + + GL+PN VTYN +I+  C  G+   A  +F  ME  G   N  T+N ++ G 
Sbjct: 401 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 460

Query: 241 IRNNETSKVVELLHRM 256
               +  K + L  +M
Sbjct: 461 CLGGDIEKAMVLFEKM 476



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 24/282 (8%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA ++ D M ++G+ PN   Y+TLIDG C  G    A ++F  M+   C+ N+ TY++L
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C+    +E+  L  EM  KG+ P  VT+ +L  G   + +++HA  L   M     
Sbjct: 667 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGC 726

Query: 122 AAETSTYNTFIDGLCKNGYIVE------------------------AAELFRTLRVLKCE 157
                TY+  + GL K   ++E                         + L   +  + CE
Sbjct: 727 KPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCE 786

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             ++ YS L+ GLC+ G+   A +L + +   G  P+   Y  ++   C + ++D A  +
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           F  +EAKG   +   +  L+    +  +  +   L   M E+
Sbjct: 847 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK 888



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 24/283 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL+ M + G  PN   Y+ +I+G         A ++   M   G + NV+TY T
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+    + +  ++ +M  +   P + TY++L +GL +  + + A  L  EM+   
Sbjct: 631 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 690

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL---- 176
           +A +  T+ + IDG    G I  A  L R +  + C+     YS L+ GL K   L    
Sbjct: 691 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEK 750

Query: 177 --------------------ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
                               E    L   +  +G  P + TY+ ++ G C  G+  +A  
Sbjct: 751 VAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 810

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L  DM+ +G  P+   + +L++   +N E    +++ H ++ +
Sbjct: 811 LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 853



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 24/256 (9%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  LL  M ++G+ P+   +++LIDGF + G ID A  L   M   GC  N  TY+ L
Sbjct: 677 DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVL 736

Query: 62  INGYCKT----------------------KDV--EESLNLYSEMLSKGIRPTVVTYNTLF 97
           + G  K                       KDV  E   NL + M   G  PT+ TY+TL 
Sbjct: 737 LKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLV 796

Query: 98  HGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
            GL    +   A +L  +M+      +   Y + +   CKN  +  A ++F ++     +
Sbjct: 797 SGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQ 856

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           L +  Y  LI  LCK G++E A  LF ++       + + + +++ G   +G++D    L
Sbjct: 857 LHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKL 916

Query: 218 FLDMEAKGVAPNCVTF 233
              ME+K   PN  T+
Sbjct: 917 LHIMESKNFTPNIQTY 932



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 5/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTG-----EIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           M+ R VR   F  +  I    +       EI R  +    +   G   ++ + NTL+   
Sbjct: 156 MLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQL 215

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K + VE + NLY +ML+ GI+P+++T+NTL + L +  +V  A  +  ++   D++ + 
Sbjct: 216 AKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 275

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY + I G C+N  +  A  +F  +    C+     YS LI+GLC  G+++ A ++ + 
Sbjct: 276 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 335

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G+ P V TY + I   C     ++A +L   M+ +G  PN  T+  L+ G  R  +
Sbjct: 336 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 395

Query: 246 TSKVVELLHRM 256
               + L H+M
Sbjct: 396 LEVAIGLYHKM 406



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 96/191 (50%)

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           +++    +  +E+   G   ++ + NTL   L +   VE A  L+ +M +S +     T+
Sbjct: 184 EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 243

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT I+ L K G + EA  +   +        +  Y+ LI G C+   L+ A+ +F  + +
Sbjct: 244 NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 303

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  PN VTY+ +I+G CN+G++D+A D+  +M  KG+ P   T+   +          +
Sbjct: 304 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEE 363

Query: 249 VVELLHRMDER 259
            +EL+ RM +R
Sbjct: 364 AIELVARMKKR 374



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 76/171 (44%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           S LL  M + G  P    YSTL+ G C  G    A +L   M   G   +   Y +L+  
Sbjct: 774 SNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 833

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +CK  +V+ +L ++  + +KG +  +  Y  L   L +  QVE A  LFD M   +  A+
Sbjct: 834 HCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD 893

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
              +   +DGL K G +    +L   +        I+ Y  L   L +IGK
Sbjct: 894 EIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 944



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L+  M +RG  P+  +Y +L+   C   E+D A ++F S++  G   ++  Y  LI
Sbjct: 807 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 866

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK   VEE+  L+  ML K      + +  L  GL +  +++  +KL   M+  +  
Sbjct: 867 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 926

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
               TY      L + G  +E+  L   L+VLK
Sbjct: 927 PNIQTYVILGRELSRIGKSIESEPLADKLKVLK 959


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 133/254 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M   G+ PN + Y+ L+  +C TGE +RAR LF  M   G   NVV+YNTLI G C
Sbjct: 95  LFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLC 154

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           + + ++++  L   M  +GIRP+VVT+N L  G  +  ++ +AL   ++M+ +       
Sbjct: 155 RYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAV 214

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G C+   ++ A   F  ++          Y+ LID   +   ++ A+E+F  +
Sbjct: 215 TYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGM 274

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL  +V TY +++H  C +G M  A  LF  +  KG+    V ++ L+ G  R   +
Sbjct: 275 EKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSS 334

Query: 247 SKVVELLHRMDERN 260
            K ++L+  M ++ 
Sbjct: 335 YKAMKLIMEMRKKG 348



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 120/235 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+ D+M + G+ PN   ++ LI G+ + G  ++   LF  M I G   N+ TYN L+
Sbjct: 56  EAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILV 115

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +C+T + E +  L+ EM +KGI   VV+YNTL  GL    +++ A +L + M+   + 
Sbjct: 116 GEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIR 175

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +DG  K G +  A      +R+   +     Y+ LI G C+   +  A   
Sbjct: 176 PSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRA 235

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           F  +   GL P  VTY I+I  F  +  MDKA ++F  ME  G+  +  T+  L+
Sbjct: 236 FSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLV 290



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 117/235 (49%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + L+ G+C +G++  A+ +F  M   G   N VT+  LI+GY      E+ L L+ +M  
Sbjct: 42  TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            GI P + TYN L        + E A  LF+EM    +     +YNT I GLC+   + +
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKD 161

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A +L   +R       +  ++ L+DG  K GK+  A      +   G  P+ VTYN +I 
Sbjct: 162 ATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIA 221

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           GFC    M +A+  F DM+ +G+AP  VT+  L+    R N+  K  E+   M++
Sbjct: 222 GFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEK 276



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 119/226 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A++LL+LM + G+RP+   ++ L+DG+   G++  A      M + G   + VTYN 
Sbjct: 159 MKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNA 218

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+ +D+  +   +S+M  +G+ PT VTY  L       + ++ A ++F  M+ + 
Sbjct: 219 LIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAG 278

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   +  LC  G + +A +LF+++     ++G   Y  LI G  + G    A 
Sbjct: 279 LEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAM 338

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +L   + + G +PN  +Y + I   CNDG+  +A  L  DM   GV
Sbjct: 339 KLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGV 384



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V     L++GYC++ DV E+  ++  M   G+ P  VT+  L HG F   + E  L LF
Sbjct: 37  DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALF 96

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           ++M+   +     TYN  +   C+ G    A  LF  +        + +Y+ LI GLC+ 
Sbjct: 97  EKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRY 156

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            K++ A +L + + R G+ P+VVT+N+++ G+   G+M  A      M   G  P+ VT+
Sbjct: 157 RKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTY 216

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
           N L+ G  R  +  +       M ER 
Sbjct: 217 NALIAGFCRARDMIRANRAFSDMKERG 243



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 1/153 (0%)

Query: 105 QVEHALKLFDE-MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
           +V  AL L     +  D   + +     + G C++G + EA  +F  +  L        +
Sbjct: 17  EVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTF 76

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + LI G    G+ E    LF+ +   G+ PN+ TYNI++  +C  G+ ++A  LF +M A
Sbjct: 77  TALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPA 136

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           KG+  N V++NTL+ G  R  +     +LL  M
Sbjct: 137 KGITRNVVSYNTLIAGLCRYRKMKDATQLLELM 169



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 58/139 (41%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  +   M + G+  +   Y  L+   C+ G +  AR+LF S+   G     V Y+ 
Sbjct: 264 MDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDM 323

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY +     +++ L  EM  KG  P   +Y      L    +   A  L D+M  + 
Sbjct: 324 LIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAG 383

Query: 121 VAAETSTYNTFIDGLCKNG 139
           V    S     ++   + G
Sbjct: 384 VQTSESVRQVLLNAKARQG 402


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 129/238 (54%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQRGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + +A ++ DLM + G   PN+  YS LI G C  G ++ A  L   M   GC  +  TY 
Sbjct: 246 LRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI   C    ++++ NL+ EM+++G +P V TY  L  GL    ++E A  +  +M   
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     TYN  I+G CK+G +V A EL   +    C+  +  ++ L++GLC++GK   A
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             L + +   GL P++V+YN++I G C +G M+ A+ L   M +  + P+C+TF  ++
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAII 483



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 124/235 (52%), Gaps = 1/235 (0%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y T+++  C  G  + A      +   G + +     +L+ G+C+  ++ ++L ++  M 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257

Query: 83  SKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            +G   P  V+Y+ L HGL E+ ++E A  L D+M        T TY   I  LC  G I
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            +A  LF  +    C+  +  Y+ LIDGLC+ GK+E A  + + + + G+ P+V+TYN +
Sbjct: 318 DKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNAL 377

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           I+G+C DG++  A +L   ME +   PN  TFN LM G  R  +  K V LL RM
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D M ++G +P+   Y+ LI   C  G ID+A  LF  M   GC  NV TY  
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTV 341

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+   +EE+  +  +M+  GI P+V+TYN L +G  +  +V  A +L   M+   
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+N  ++GLC+ G   +A  L + +        I +Y+ LIDGLC+ G +  A+
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAY 461

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L  S+    L P+ +T+  +I+ FC  G+ D A      M  KG++ + VT  TL+ G 
Sbjct: 462 KLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 241 IRNNETSKVVELLHRM 256
               +T   + +L  +
Sbjct: 522 CNVGKTRDALFILETL 537



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L D MI RG +PN   Y+ LIDG C  G+I+ A  +   M  +G   +V+TYN 
Sbjct: 317 IDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNA 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK   V  +  L + M  +  +P V T+N L  GL  + +   A+ L   M  + 
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  +YN  IDGLC+ G++  A +L  ++     E     ++ +I+  CK GK + A 
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVAS 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA----------------HDL--FLDME 222
                + R G+  + VT   +I G CN G+   A                H L   LDM 
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDML 556

Query: 223 AK-----------------GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +K                 G+ P+ VT+ TL+ G IR+ + S    +L  M
Sbjct: 557 SKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELM 607



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 1/249 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTK 69
           +++ G   ++ + ++L+ GFC    +  A ++F  M   G C  N V+Y+ LI+G C+  
Sbjct: 221 ILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVG 280

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            +EE+  L  +M  KG +P+  TY  L   L +   ++ A  LFDEM          TY 
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYT 340

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             IDGLC++G I EA  + R +        +  Y+ LI+G CK G++  A+EL   + + 
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
              PNV T+N ++ G C  G+  KA  L   M   G++P+ V++N L+ G  R    +  
Sbjct: 401 ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVA 460

Query: 250 VELLHRMDE 258
            +LL  M+ 
Sbjct: 461 YKLLTSMNS 469



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 126/257 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  M+  G+ P+   Y+ LIDG C  G ++ A +L  SM+      + +T+  +I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAII 483

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N +CK    + +      ML KGI    VT  TL  G+  + +   AL + + +    + 
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRML 543

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               + N  +D L K   + E   +   +  L     +  Y+ L+DGL + G +  ++ +
Sbjct: 544 TTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRM 603

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G +PNV  Y I+I+G C  G++++A  L   M+  GV+PN VT+  ++ G + 
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663

Query: 243 NNETSKVVELLHRMDER 259
           N +  + +E +  M ER
Sbjct: 664 NGKLDRALETVRAMVER 680



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 7/249 (2%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVS---MDINGCMHNVVTYNTLINGYCKTKDV 71
           G R N   YS+L+       ++D     +V+   M+ +G +  ++ Y T++N  CK    
Sbjct: 155 GFRLNYPCYSSLLMSL---AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYT 211

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS-TYNT 130
           E +     ++L  G         +L  G      +  ALK+FD M      A  S +Y+ 
Sbjct: 212 EAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSI 271

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I GLC+ G + EA  L   +    C+     Y+ LI  LC  G ++ A+ LF  +   G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG 331

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             PNV TY ++I G C DG++++A+ +   M   G+ P+ +T+N L+ G  ++       
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAF 391

Query: 251 ELLHRMDER 259
           ELL  M++R
Sbjct: 392 ELLTVMEKR 400


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A  LF  M   G + N VT+ T
Sbjct: 187 LDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M ++G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +         Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M   G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMII 388



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 125/242 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M   G++P V TY+ L +GL +  +++ A  LFDEM    +     T+ T IDG
Sbjct: 191 FRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A  LF  +           ++ LIDG CK G+++
Sbjct: 199 VSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++V   +  +  YS LI+GLCK  K++ A  LF  +   GL+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 131/255 (51%), Gaps = 5/255 (1%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D  ++RG  P+A  Y+++IDG C  G ++   E F  M   G   + VTY  LI+G+ K 
Sbjct: 211 DEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKA 270

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K + ++  +Y +ML  G   + VTYN +  GL +  +V  A   F  M+     A   TY
Sbjct: 271 KMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTY 330

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           +  +DG C  G +  A ELFR +    CE  + +Y+ +I GLC+ GKL  A+  F+ L +
Sbjct: 331 SALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQ 390

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHD---LFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
             L P+V T+N  +HG C   ++D   D   LF  M ++G +PN  +++ LM G  R   
Sbjct: 391 RRLCPDVYTFNAFLHGLCQ--RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 448

Query: 246 TSKVVELLHRMDERN 260
               +E+   M  R 
Sbjct: 449 LEVALEIFREMVSRG 463



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 137/243 (56%), Gaps = 2/243 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+   M+Q G   +   Y+ ++DG C  G +  A   F++M+  GC+  VVTY+ 
Sbjct: 273 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 332

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+C   +V  ++ L+  ML +G  P +V+YN +  GL    ++  A   F+++    
Sbjct: 333 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392

Query: 121 VAAETSTYNTFIDGLCKN-GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  +  T+N F+ GLC+    + +  ELF ++        + +YS L+DG+C+ G LE A
Sbjct: 393 LCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVA 452

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+F+ +   G+ P+VV +N +I   C  G++D+A ++F ++E +  AP+  ++ +L+ G
Sbjct: 453 LEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDG 511

Query: 240 CIR 242
             R
Sbjct: 512 LSR 514



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 140/262 (53%), Gaps = 11/262 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+  ++ G  P+   Y+  IDG C    +D A +L   MD   C+   VTY  
Sbjct: 23  LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 82

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K   ++E++ +  +M+ KG  PT+ TY  +  GL +  +VE A ++F +M  + 
Sbjct: 83  LVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 142

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK----CELGIEAYSCLIDGLCKIGKL 176
              +   Y   I GLCK+G   EA  L++     K        +  Y+ LIDGLCK G++
Sbjct: 143 CRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRI 202

Query: 177 ETAWELF--QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
             A ++F  +++ R G +P+ VTY  +I G C  G++++  + F +M  +G  P+ VT+ 
Sbjct: 203 LEARQVFDDEAVER-GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 261

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
            L+ G ++    +K++   HR+
Sbjct: 262 ALIDGFMK----AKMIPKAHRV 279



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 1/251 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  RG  P+A  Y+ LIDGF     I +A  ++  M  +G + + VTYN +++G CK   
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E+   +  M  +G   TVVTY+ L  G      V  A++LF  M          +YN 
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC-KIGKLETAWELFQSLPRV 189
            I GLC+ G + +A   F  L   +    +  ++  + GLC ++  +    ELF+S+   
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  PN+ +Y+I++ G C  G ++ A ++F +M ++GVAP+ V FNTL+          + 
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487

Query: 250 VELLHRMDERN 260
           +E+   ++ R+
Sbjct: 488 LEVFRELERRS 498



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   ++ +I+G C    +D A  +       GC  + VTYN  I+G CK + V+++  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +M  K   PT VTY  L  GL +  +++ A+ + ++M     +    TY   IDGL K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP----RVGLMP 193
            G + EA  +F  +    C      Y+ LI GLCK GK E A+ L++           +P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEA--KGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +VVTY  +I G C  G++ +A  +F D EA  +G  P+ VT+ +++ G  +     +  E
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVF-DDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 252 LLHRMDERN 260
             H M  R 
Sbjct: 244 RFHEMRNRG 252



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 4/193 (2%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  ++V +  +ING C+ K ++E+ ++    +  G  P  VTYN    GL +  +V+ A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +L  +M        T TY   +DGL K G + EA  +   +        ++ Y+ +IDGL
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG----V 226
            K G++E A  +F  +   G  P+   Y  +I G C  G+ ++A+ L+ +  A+      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 227 APNCVTFNTLMLG 239
            P+ VT+ +L+ G
Sbjct: 183 VPDVVTYTSLIDG 195



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%)

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           + C   + A++ +I+GLC+  +L+ A+ + +   R G  P+ VTYN+ I G C   ++D 
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           A  L   M+ K   P  VT+  L+ G ++     + + +L +M E+ 
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKG 107


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 35/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  RLL  M +  ++P+++ Y TL+DG+C  G   +A  +   M   G    VVTYNTL+
Sbjct: 225 EGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLL 284

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+  D +++L L+  ML +G+ P  V Y TL  GLF++     AL L+D++    + 
Sbjct: 285 KGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGIN 344

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW-- 180
                +NT I+GLCK G +  A E F+ +  L C+     Y  L DG CK+G +E A+  
Sbjct: 345 KSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKI 404

Query: 181 -------------ELFQSL--------------------PRVGLMPNVVTYNIMIHGFCN 207
                        E++ SL                       GL PNVVTY  +I G+C+
Sbjct: 405 KEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCD 464

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G++DKA   + +M  KG APN +  + ++    R     +   LL +M
Sbjct: 465 QGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 513



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 144/259 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A R+ D M++ G++ N FV ++LI+G+C  G++     L + M       +  +Y T
Sbjct: 188 MGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCT 247

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC+     ++ N+  +ML KGI PTVVTYNTL  GL      + AL+L+  M    
Sbjct: 248 LVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRG 307

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      Y T +DGL K G    A  L+  +        I A++ +I+GLCK+G+++ A 
Sbjct: 308 VTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAK 367

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E F+ +  +G  P+ +TY  +  G+C  G +++A  +   ME + + P+   +N+L++G 
Sbjct: 368 ETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGL 427

Query: 241 IRNNETSKVVELLHRMDER 259
             + + SK+++LL  MD R
Sbjct: 428 FTSKKISKLIDLLAEMDTR 446



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 128/254 (50%), Gaps = 5/254 (1%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D M +  + P+ F  + +++ +C  G+++RA E    M+  G   N V+YN+L++GY   
Sbjct: 55  DQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSL 114

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETST 127
            D+E +  +   M  KG+    VT   L  G  +  +VE A K+  EM+  D V  +   
Sbjct: 115 GDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYA 174

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQS 185
           Y   IDG CK G + +A  +   +  LK  L +  + C  LI+G CK G++     L   
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEM--LKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMC 232

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + ++ L P+  +Y  ++ G+C DG   KA ++   M  KG+ P  VT+NTL+ G  R  +
Sbjct: 233 MRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGD 292

Query: 246 TSKVVELLHRMDER 259
               + L H M +R
Sbjct: 293 YKDALRLWHLMLQR 306



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)

Query: 5   SRLLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           S+L+DL+ +   RG+ PN   Y  LI G+C  G +D+A   +  M   G   NV+  + +
Sbjct: 434 SKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKI 493

Query: 62  INGYCKTKDVEESLNLYSEML---------------SKGIR------------------- 87
           ++   +   ++E+  L  +M+               +  IR                   
Sbjct: 494 VSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFS 553

Query: 88  -PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P  V YN    GL +  +V  A + F  + H     +  TY T I G    GY+ EA  
Sbjct: 554 LPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFN 613

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L   +        I  Y+ L++GLCK G L+ A  LF  L   GL+PNVVTYNI+I G+C
Sbjct: 614 LRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYC 673

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             G   +A DL   M  +G++P+ +T+++L+ G  + ++  + ++LL+ M   N
Sbjct: 674 KSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASN 727



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A   +  M + G   NA  Y++L+DG+   G+I+ A+ +   M   G M N VT   
Sbjct: 82  VERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTL 141

Query: 61  LINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI GYCK   VEE+  +  EM  + G+      Y  L  G  ++ ++  A+++ DEM   
Sbjct: 142 LIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKV 201

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +       N+ I+G CKNG + E   L   +R L  +    +Y  L+DG C+ G    A
Sbjct: 202 GLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKA 261

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + +   + R G+ P VVTYN ++ G C  G    A  L+  M  +GV PN V + TL+ G
Sbjct: 262 FNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDG 321

Query: 240 CIRNNETSKVVEL 252
             +  + S+ + L
Sbjct: 322 LFKMGDFSRALTL 334



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 113/185 (61%), Gaps = 5/185 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D M+ +G+ PN   Y+ L++G C +G +DRAR LF  + + G + NVVTYN 
Sbjct: 608 VNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNI 667

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK+    E+L+L  +ML +GI P+++TY++L +G  +   VE A+KL +EM+ S+
Sbjct: 668 LIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASN 727

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    +T++  ++G  ++G + + ++L   + +     GI ++  +     ++ +L  A 
Sbjct: 728 VDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHKQM-----ELSELSNAK 782

Query: 181 ELFQS 185
           E+  S
Sbjct: 783 EMLDS 787



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           +D+A      MI +G  PN  + S ++      G ID A  L   M              
Sbjct: 468 LDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLED 527

Query: 47  ---------------------DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                 I   + N V YN  + G CK+  V ++   +  +    
Sbjct: 528 FQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGS 587

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P   TY TL HG      V  A  L DEM +  +    +TYN  ++GLCK+GY+  A 
Sbjct: 588 FTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRAR 647

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            LF  L +      +  Y+ LIDG CK G    A +L   + + G+ P+++TY+ +I+GF
Sbjct: 648 RLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGF 707

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C    +++A  L  +M+A  V     TF+ L+ GCI++ +  K+ +L + M
Sbjct: 708 CKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMM 758



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 130/259 (50%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-NGCMHNVVTYN 59
           ++ A  +L  M ++GV  N    + LI G+C   +++ A ++   M+  +G + +   Y 
Sbjct: 117 IEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYG 176

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+GYCK   + +++ +  EML  G++  +   N+L +G  +  QV    +L   M+  
Sbjct: 177 ALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKL 236

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           D+  ++ +Y T +DG C++G   +A  +   +     E  +  Y+ L+ GLC+ G  + A
Sbjct: 237 DLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDA 296

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L+  + + G+ PN V Y  ++ G    G   +A  L+ D+ A+G+  +   FNT++ G
Sbjct: 297 LRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMING 356

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  E     E   RM+E
Sbjct: 357 LCKMGEMDGAKETFKRMEE 375



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 7/257 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D M + G +P+    ++L+      GE   A  ++  M     + +V T   ++N
Sbjct: 15  ALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVN 74

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            YCK   VE ++    EM   G     V+YN+L  G   +  +E A  +   M    V  
Sbjct: 75  AYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMR 134

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKLETA 179
              T    I G CK   + EA    + LR ++ E G+     AY  LIDG CK+GK+  A
Sbjct: 135 NKVTLTLLIKGYCKQCKVEEAE---KVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDA 191

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   + +VGL  N+   N +I+G+C +GQ+ +   L + M    + P+  ++ TL+ G
Sbjct: 192 IRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDG 251

Query: 240 CIRNNETSKVVELLHRM 256
             R+  +SK   +  +M
Sbjct: 252 YCRDGLSSKAFNVCDQM 268



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 1/176 (0%)

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           Y +   V+ +L+++  M   G +P++ + N+L   L +  +   A+ ++D+M+  D+  +
Sbjct: 6   YAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPD 65

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             T    ++  CK G +  A E  R +  L  EL   +Y+ L+DG   +G +E A  + +
Sbjct: 66  VFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLK 125

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAPNCVTFNTLMLG 239
            +   G+M N VT  ++I G+C   ++++A  +  +ME + GV  +   +  L+ G
Sbjct: 126 FMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 76/159 (47%)

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           E   V++AL +FD M          + N+ +  L K G    A  ++  +R L     + 
Sbjct: 8   EKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVF 67

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             + +++  CK GK+E A E  + + ++G   N V+YN ++ G+ + G ++ A  +   M
Sbjct: 68  TCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM 127

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             KGV  N VT   L+ G  +  +  +  ++L  M++ +
Sbjct: 128 SEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKED 166


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 142/258 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L   M Q GV  N   Y+ L+DG C  G +  A ELF ++   G   N   Y +
Sbjct: 407 LNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTS 466

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +GY K K +E+++++  EM  K ++P ++ Y T   GL   +++E ++ +  EM    
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A +  Y T ID   K G   EA  L + ++ L  ++ +  Y  LIDGLCKIG ++ A 
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  + R GL PN++ Y  +I G C +  +++A +LF +M  KG++P+ + + +L+ G 
Sbjct: 587 RYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646

Query: 241 IRNNETSKVVELLHRMDE 258
           +++    + + L +RM E
Sbjct: 647 MKHGNPGEALSLRNRMVE 664



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 133/250 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+ P+ F Y+ +I      G+++ AR LF  M   G   ++VTYN+LI+GY K   
Sbjct: 242 MVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGM 301

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +++++ EM   G  P V+TYN+L +   +  ++  A +    M+   +     TY+T
Sbjct: 302 LTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYST 361

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK G ++EA + F  +  +  +     Y+ LID  CKIG L  A++L   + + G
Sbjct: 362 LIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG 421

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           +  N+VTY  ++ G C DG+M +A +LF  +   G   N   + +L  G I+     K +
Sbjct: 422 VNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAM 481

Query: 251 ELLHRMDERN 260
           ++L  M+++N
Sbjct: 482 DILEEMNKKN 491



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L + M  +G+RP+   Y++LIDG+   G +  A  +F  M   GC  +V+TYN+
Sbjct: 267 LEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNS 326

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +CK + + ++      M  +G++P VVTY+TL     +   +  A K F +M    
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + ID  CK G + EA +L   ++     L I  Y+ L+DGLC+ G++  A 
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF +L + G   N   Y  + HG+     M+KA D+  +M  K + P+ + + T + G 
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506

Query: 241 IRNNETSKVVELLHRM 256
            R NE    + ++  M
Sbjct: 507 CRQNEIEDSMAVIREM 522



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 125/255 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + + M   G  P+   Y++LI+ FC    I +A E    M   G   NVVTY+TLI+
Sbjct: 305 AVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLID 364

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK   + E+   + +M+  G++P   TY +L     +I  +  A KL  EMQ + V  
Sbjct: 365 AFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNL 424

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   +DGLC++G + EA ELF  L      L  + Y+ L  G  K   +E A ++ 
Sbjct: 425 NIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDIL 484

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + +  L P+++ Y   I G C   +++ +  +  +M   G+  N   + TL+    + 
Sbjct: 485 EEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKV 544

Query: 244 NETSKVVELLHRMDE 258
            +T++ V LL  M +
Sbjct: 545 GKTTEAVNLLQEMQD 559



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 116/221 (52%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           RP   V+ TL +     G ++ AR+ F  M+    +  V + N L++   K+     +L+
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            + +M+  G+ P+V TYN +   L     +E A  LF+EM+   +  +  TYN+ IDG  
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G +  A  +F  ++   CE  +  Y+ LI+  CK  ++  A+E    + + GL PNVV
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           TY+ +I  FC  G + +A+  F+DM   G+ PN  T+ +L+
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLI 398



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 111/215 (51%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A   F  M + G   +V TYN +I    +  D+E + +L+ EM +KG+RP +VTYN+L  
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           G  ++  +  A+ +F+EM+ +    +  TYN+ I+  CK   I +A E    ++    + 
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  YS LID  CK G L  A + F  + RVGL PN  TY  +I   C  G +++A  L 
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            +M+  GV  N VT+  L+ G   +    +  EL 
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELF 449



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 8/230 (3%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+  N+++Y+TLID +   G+   A  L   M   G    VVTY  LI+G CK   
Sbjct: 522 MMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGL 581

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V++++  +  M   G++P ++ Y  L  GL +   +E A  LF+EM    ++ +   Y +
Sbjct: 582 VQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTS 641

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG  K+G   EA  L   +  +  EL + AY+ LI G  + G+++ A  L   + R G
Sbjct: 642 LIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKG 701

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV--------APNCVT 232
           ++P+ V    ++  +   G +++A  L  DM  +G+         P+C+T
Sbjct: 702 IIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLT 751



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 93/189 (49%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C      ++TL N       +EE+   + +M    + P V + N L H L +  +   
Sbjct: 175 NVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGL 234

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           AL  F +M  + ++    TYN  I  L + G +  A  LF  ++       I  Y+ LID
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  K+G L  A  +F+ +   G  P+V+TYN +I+ FC   ++ +A +    M+ +G+ P
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354

Query: 229 NCVTFNTLM 237
           N VT++TL+
Sbjct: 355 NVVTYSTLI 363



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%)

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           RP    ++TLF+ L ++  +E A + F +M    V  +  + N  +  L K+     A  
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
            F+ + V      +  Y+ +I  L + G LE A  LF+ +   GL P++VTYN +I G+ 
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             G +  A  +F +M+  G  P+ +T+N+L+    +     +  E LH M +R 
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG 351



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C  G   +  L + L  +G LE A + F  + +  ++P V + N ++H      +   A 
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCI-RNNETSKVVELLHRMDERN 260
             F DM   G++P+  T+N +++GC+ R  +      L   M  + 
Sbjct: 237 SFFKDMVVAGLSPSVFTYN-MVIGCLAREGDLEAARSLFEEMKAKG 281


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 154/330 (46%), Gaps = 70/330 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  LLD M+ +G+ PN   Y+ +I G C  G +D A  +F  M       NVVTY+ 
Sbjct: 445 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 504

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ--------------- 105
           LI+G  K  D E++L+L+ +MLS  I PT  T+NT+ +GL ++ Q               
Sbjct: 505 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564

Query: 106 --------------------VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                               ++ AL ++ EM    V+    TY + I+G CK+  I  A 
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 624

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +    +R    EL + AYS LIDG CK   +E+A +LF  L  VGL PN + YN MI GF
Sbjct: 625 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684

Query: 206 ----------------------CN-------------DGQMDKAHDLFLDMEAKGVAPNC 230
                                 C+             +G++  A DL+++M +KG+ P+ 
Sbjct: 685 RDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDI 744

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +TF+ L+ G     +     ++L  MD +N
Sbjct: 745 ITFHVLVNGLCNKGQLENARKILEEMDRKN 774



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 139/246 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M + GV PN   Y++LI+GFC +  ID A +    M   G   +V  Y+ 
Sbjct: 585 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 644

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK +D+E + +L+ E+L  G+ P  + YN++  G  +++ +E AL  + +M +  
Sbjct: 645 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 704

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDGL K G +V A++L+  +        I  +  L++GLC  G+LE A 
Sbjct: 705 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 764

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + + R  + P+V+ YN +I G+  +G + +A  L  +M  +G+ P+ VT++ L+ G 
Sbjct: 765 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGK 824

Query: 241 IRNNET 246
            + + +
Sbjct: 825 FKGDRS 830



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 153/295 (51%), Gaps = 39/295 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L D M+   + P  F ++T+I+G C  G++  AR+   +    G + + +TYN++
Sbjct: 516 EKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 575

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G+ K  +++ +L +Y EM   G+ P VVTY +L +G  + ++++ ALK  DEM+   +
Sbjct: 576 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 635

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL--------RV-------------------- 153
             + + Y+  IDG CK   +  A +LF  L        R+                    
Sbjct: 636 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALV 695

Query: 154 ---------LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                    + C+LG   Y+ LIDGL K G+L  A +L+  +   G++P+++T++++++G
Sbjct: 696 WYKKMINDRIPCDLG--TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNG 753

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            CN GQ++ A  +  +M+ K + P+ + +NTL+ G  R     +   L   M +R
Sbjct: 754 LCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 808



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA RL + MI  G   N  V ++L+ G+C  G +D A  LF  +  +G   N VTY+ 
Sbjct: 306 MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSV 365

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C + ++E++  LY++M   GI P+V   N+L  G  +    E A KLFDE     
Sbjct: 366 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 425

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   TYN  +  LCK G + EA  L   +        + +Y+ +I G C+ G ++ A 
Sbjct: 426 V-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 484

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +    L PNVVTY+I+I G    G  +KA DLF  M +  +AP   TFNT++ G 
Sbjct: 485 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 544

Query: 241 IRNNETSKVVELL 253
            +  + S+  + L
Sbjct: 545 CKVGQMSEARDKL 557



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 143/293 (48%), Gaps = 34/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L + + + G+ PN   YS LI+G C +G I++A EL+  M +NG   +V   N+
Sbjct: 341 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 400

Query: 61  LINGY----------------------------------CKTKDVEESLNLYSEMLSKGI 86
           L+ GY                                  CK   ++E+ +L   M+++G+
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 460

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P VV+YN +  G      ++ A  +F +M   D+     TY+  IDG  K G   +A +
Sbjct: 461 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 520

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LF  +  L        ++ +I+GLCK+G++  A +  ++    G +P+ +TYN ++ GF 
Sbjct: 521 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 580

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +G +D A  ++ +M   GV+PN VT+ +L+ G  ++N     ++    M E+
Sbjct: 581 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 633



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 34/290 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA        +RGV+ +A  YS +I   C     +   EL   M   G + +  T+ +
Sbjct: 236 VEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTS 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I       ++ E+L L  EM++ G    +V   +L  G      ++ AL LF+++    
Sbjct: 296 VIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV-----------------LKCELGIEA- 162
           +     TY+  I+G C +G I +A+EL+  +++                 LK  L  EA 
Sbjct: 356 LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS 415

Query: 163 ----------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           Y+ ++  LCK GK++ A  L  ++   G++PNVV+YN MI G C
Sbjct: 416 KLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHC 475

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G MD A  +F DM A+ + PN VT++ L+ G  +  ++ K ++L  +M
Sbjct: 476 RKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 525



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 107/235 (45%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
            + MI + V P     + L+        I   R+L+  M + G   +  T + ++    K
Sbjct: 173 FNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLK 232

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              VEE+   + E   +G++     Y+ +   + +       L+L +EM+        +T
Sbjct: 233 EGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEAT 292

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           + + I      G +VEA  L   +      + +   + L+ G C  G L++A  LF  + 
Sbjct: 293 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 352

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             GL PN VTY+++I G CN G ++KA +L+  M+  G+ P+    N+L+ G ++
Sbjct: 353 EDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 407



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 44/267 (16%)

Query: 32  LTGEIDRARELFVSMDINGCM-------HNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
           ++G+ D +  +FV   IN          H V  +N L+N Y +   +E +++ ++ M+ +
Sbjct: 122 VSGDSDPSPVVFVDHLINCAKRFDFELDHRV--FNYLLNAYIRANRIENAIDCFNAMICQ 179

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
            + P V   N L   L   + +     L+++M    +  +  T +  +    K G + EA
Sbjct: 180 DVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEA 239

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP----------- 193
            E FR  +    +L   AYS +I  +CK        EL + +   G +P           
Sbjct: 240 EEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVA 299

Query: 194 ------------------------NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
                                   N+V    ++ G+C  G +D A +LF  +   G+ PN
Sbjct: 300 CVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPN 359

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            VT++ L+ GC  +    K  EL  +M
Sbjct: 360 KVTYSVLIEGCCNSGNIEKASELYTQM 386



 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 36/196 (18%), Positives = 71/196 (36%), Gaps = 17/196 (8%)

Query: 66  CKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVE-HALKLFDEMQHSDVAA 123
           C   D + +L  +      +G    V  Y  L H L    +   HA KL           
Sbjct: 69  CHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLL---------- 118

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
                N ++ G      +V    L    +    EL    ++ L++   +  ++E A + F
Sbjct: 119 -----NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCF 173

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            ++    ++P V   NI++        + +  DL+  M  +G+  +  T + ++  C++ 
Sbjct: 174 NAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKE 233

Query: 244 NETSKVVELLHRMDER 259
               +  E      ER
Sbjct: 234 GRVEEAEEYFRETKER 249


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 138/251 (54%), Gaps = 4/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ PN   Y+ LI+  C+ G    A ++F  M+ +G + N  TYN +I G C   D
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E+++ L+ +ML  G  PTVVTYNTL +G      V +A +L D M+ +    +  TYN 
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPR 188
            + G  K G +  A+  F+ +  ++C L     +Y+ LIDG  K GK++ A  L + +  
Sbjct: 484 LVSGFSKWGKLESASFYFQEM--VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G  PNV +YN +I+G   + +  +A  +   M  +G+ PN +T+ TL+ G  RN  T  
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601

Query: 249 VVELLHRMDER 259
             ++ H M++R
Sbjct: 602 AFKIFHDMEKR 612



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + M++ G  P    Y+TLI+G+   G ++ A  L   M  NGC  +  TYN 
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+ K   +E +   + EM+  G+ P  V+Y  L  G  +  +V+ AL L   M+   
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YN  I+GL K     EA ++   +        +  Y+ LIDGLC+ G+ + A+
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  + +   +PN+ TY+ +I+G C +G+ D+A  L  +ME KG+AP+ VTF +L+ G 
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 663

Query: 241 IRNNETSKVVELLHRM 256
           +          LL RM
Sbjct: 664 VVLGRIDHAFLLLRRM 679



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 128/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+RLLDLM + G  P+ + Y+ L+ GF   G+++ A   F  M   G   N V+Y  
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   V+ +L+L   M   G  P V +YN + +GL + ++   A K+ D+M    
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T IDGLC+NG    A ++F  +   KC   +  YS LI GLC+ GK + A 
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 638

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + + R GL P+ VT+  +I GF   G++D A  L   M   G  PN  T++ L+ G
Sbjct: 639 ILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 127/256 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++   M   G   N   Y+ +I G CL G+I++A  LF  M   G +  VVTYNTLIN
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY    +V  +  L   M   G  P   TYN L  G  +  ++E A   F EM    +  
Sbjct: 452 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 511

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y   IDG  K+G +  A  L + +  + C   +E+Y+ +I+GL K  +   A ++ 
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   GL+PNV+TY  +I G C +G+   A  +F DME +   PN  T+++L+ G  + 
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631

Query: 244 NETSKVVELLHRMDER 259
            +  +   LL  M+ +
Sbjct: 632 GKADEAEILLKEMERK 647



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 123/239 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + D M++ G  PN+  YSTLI+G C  G +D A ++   M   G    V TY  
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I   C  +  EE++ L + M  +G RP V TY  L  GL  + ++E A+ L+ +M    
Sbjct: 309 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TYN  I+ LC  G    A ++F  +         + Y+ +I GLC  G +E A 
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 428

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ + ++G +P VVTYN +I+G+   G ++ A  L   M+  G  P+  T+N L+ G
Sbjct: 429 VLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 487



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M+  G++P+   ++TLI+     G++  A  +   +       +V TY +
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+ ++++ +  ++  M+ +G  P  VTY+TL +GL    +V+ AL + +EM    
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I  LC   +  EA EL   ++   C   ++ Y+ LI GL ++GKLE A 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + + GL+PN VTYN +I+  C  G+   A  +F  ME  G   N  T+N ++ G 
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418

Query: 241 IRNNETSKVVELLHRM 256
               +  K + L  +M
Sbjct: 419 CLGGDIEKAMVLFEKM 434



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 5/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTG-----EIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           M+ R VR   F  +  I    +       EI R  +    +   G   ++ + NTL+   
Sbjct: 114 MLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQL 173

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K + VE + NLY +ML+ GI+P+++T+NTL + L +  +V  A  +  ++   D++ + 
Sbjct: 174 AKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 233

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY + I G C+N  +  A  +F  +    C+     YS LI+GLC  G+++ A ++ + 
Sbjct: 234 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G+ P V TY + I   C     ++A +L   M+ +G  PN  T+  L+ G  R  +
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353

Query: 246 TSKVVELLHRM 256
               + L H+M
Sbjct: 354 LEVAIGLYHKM 364



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 75/142 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA ++ D M+++G+ PN   Y+TLIDG C  G    A ++F  M+   C+ N+ TY++L
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C+    +E+  L  EM  KG+ P  VT+ +L  G   + +++HA  L   M     
Sbjct: 625 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGC 684

Query: 122 AAETSTYNTFIDGLCKNGYIVE 143
                TY+  + GL K   ++E
Sbjct: 685 KPNYRTYSVLLKGLQKECLLLE 706



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 84/172 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M + G  PN   Y+ +I+G         A ++   M   G + NV+TY T
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+    + +  ++ +M  +   P + TY++L +GL +  + + A  L  EM+   
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 648

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           +A +  T+ + IDG    G I  A  L R +  + C+     YS L+ GL K
Sbjct: 649 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 96/191 (50%)

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           +++    +  +E+   G   ++ + NTL   L +   VE A  L+ +M +S +     T+
Sbjct: 142 EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 201

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT I+ L K G + EA  +   +        +  Y+ LI G C+   L+ A+ +F  + +
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  PN VTY+ +I+G CN+G++D+A D+  +M  KG+ P   T+   +          +
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEE 321

Query: 249 VVELLHRMDER 259
            +EL+ RM +R
Sbjct: 322 AIELVARMKKR 332


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 138/251 (54%), Gaps = 4/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ PN   Y+ LI+  C+ G    A ++F  M+ +G + N  TYN +I G C   D
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 423

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E+++ L+ +ML  G  PTVVTYNTL +G      V +A +L D M+ +    +  TYN 
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPR 188
            + G  K G +  A+  F+ +  ++C L     +Y+ LIDG  K GK++ A  L + +  
Sbjct: 484 LVSGFSKWGKLESASFYFQEM--VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G  PNV +YN +I+G   + +  +A  +   M  +G+ PN +T+ TL+ G  RN  T  
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601

Query: 249 VVELLHRMDER 259
             ++ H M++R
Sbjct: 602 AFKIFHDMEKR 612



 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 137/259 (52%), Gaps = 4/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+RLLDLM + G  P+ + Y+ L+ GF   G+++ A   F  M   G   N V+Y  
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   V+ +L+L   M   G  P V +YN + +GL + ++   A K+ D+M    
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T IDGLC+NG    A ++F  +   KC   +  YS LI GLC+ GK + A 
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA- 637

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + +  +G  P + TY+ ++ G C  G+  +A  L  DM+ +G  P+   + +L++  
Sbjct: 638 ---ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAH 694

Query: 241 IRNNETSKVVELLHRMDER 259
            +N E    +++ H ++ +
Sbjct: 695 CKNLEVDHALKIFHSIEAK 713



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 119/236 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++   M   G   N   Y+ +I G CL G+I++A  LF  M   G +  VVTYNTLIN
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY    +V  +  L   M   G  P   TYN L  G  +  ++E A   F EM    +  
Sbjct: 452 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 511

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y   IDG  K+G +  A  L + +  + C   +E+Y+ +I+GL K  +   A ++ 
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   GL+PNV+TY  +I G C +G+   A  +F DME +   PN  T+++L+ G
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 123/239 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + D M++ G  PN+  YSTLI+G C  G +D A ++   M   G    V TY  
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I   C  +  EE++ L + M  +G RP V TY  L  GL  + ++E A+ L+ +M    
Sbjct: 309 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TYN  I+ LC  G    A ++F  +         + Y+ +I GLC  G +E A 
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 428

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF+ + ++G +P VVTYN +I+G+   G ++ A  L   M+  G  P+  T+N L+ G
Sbjct: 429 VLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSG 487



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 4/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ AS     M++ G+ PN   Y+ LIDG    G++D A  L   M+  GC  NV +YN 
Sbjct: 494 LESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNA 553

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING  K     E+  +  +M+ +G+ P V+TY TL  GL    + + A K+F +M+   
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ I GLC+ G   EA  +      + CE  ++ YS L+ GLC+ G+   A 
Sbjct: 614 CLPNLYTYSSLIYGLCQEGKADEAERMSE----IGCEPTLDTYSTLVSGLCRKGRFYEAE 669

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   G  P+   Y  ++   C + ++D A  +F  +EAKG   +   +  L+   
Sbjct: 670 QLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICAL 729

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +  +   L   M E+
Sbjct: 730 CKAGQVEEAQALFDNMLEK 748



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 131/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M+  G++P+   ++TLI+     G++  A  +   +       +V TY +
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+ ++++ +  ++  M+ +G  P  VTY+TL +GL    +V+ AL + +EM    
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I  LC   +  EA EL   ++   C   ++ Y+ LI GL ++GKLE A 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + + GL+PN VTYN +I+  C  G+   A  +F  ME  G   N  T+N ++ G 
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418

Query: 241 IRNNETSKVVELLHRM 256
               +  K + L  +M
Sbjct: 419 CLGGDIEKAMVLFEKM 434



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 4/232 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA ++ D M+++G+ PN   Y+TLIDG C  G    A ++F  M+   C+ N+ TY++L
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C+    +E+      M   G  PT+ TY+TL  GL    +   A +L  +M+    
Sbjct: 625 IYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 680

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +   Y + +   CKN  +  A ++F ++     +L +  Y  LI  LCK G++E A  
Sbjct: 681 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 740

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           LF ++       + + + +++ G   +G++D    L   ME+K   PN  T+
Sbjct: 741 LFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 5/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTG-----EIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           M+ R VR   F  +  I    +       EI R  +    +   G   ++ + NTL+   
Sbjct: 114 MLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQL 173

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K + VE + NLY +ML+ GI+P+++T+NTL + L +  +V  A  +  ++   D++ + 
Sbjct: 174 AKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 233

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY + I G C+N  +  A  +F  +    C+     YS LI+GLC  G+++ A ++ + 
Sbjct: 234 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G+ P V TY + I   C     ++A +L   M+ +G  PN  T+  L+ G  R  +
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353

Query: 246 TSKVVELLHRM 256
               + L H+M
Sbjct: 354 LEVAIGLYHKM 364



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 96/191 (50%)

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           +++    +  +E+   G   ++ + NTL   L +   VE A  L+ +M +S +     T+
Sbjct: 142 EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 201

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT I+ L K G + EA  +   +        +  Y+ LI G C+   L+ A+ +F  + +
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  PN VTY+ +I+G CN+G++D+A D+  +M  KG+ P   T+   +          +
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEE 321

Query: 249 VVELLHRMDER 259
            +EL+ RM +R
Sbjct: 322 AIELVARMKKR 332



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 4/174 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA R+ ++    G  P    YSTL+ G C  G    A +L   M   G   +   Y +L
Sbjct: 635 DEAERMSEI----GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 690

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +  +CK  +V+ +L ++  + +KG +  +  Y  L   L +  QVE A  LFD M   + 
Sbjct: 691 LIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 750

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
            A+   +   +DGL K G +    +L   +        I+ Y  L   L +IGK
Sbjct: 751 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 804



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L+  M +RG  P+  +Y +L+   C   E+D A ++F S++  G   ++  Y  LI
Sbjct: 667 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 726

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK   VEE+  L+  ML K      + +  L  GL +  +++  +KL   M+  +  
Sbjct: 727 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 786

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
               TY      L + G  +E+  L   L+VLK
Sbjct: 787 PNIQTYVILGRELSRIGKSIESEPLADKLKVLK 819


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 134/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+R+LD M  RG  P+   Y+ +I  FC  G++D A E+F  +  + C   V+TY  
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI        ++ ++ L  EMLSKG+ P  +TYN +  G+ +   V+ A +L   +    
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  +  L   G   E  +L   +  + C+  +  +S LI  LC+ GK+E A 
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L +S+   GL P+   Y+ +I GFC +G++D A +    M + G  P+ V +NT+M G 
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393

Query: 241 IRNNETSKVVELLHRMDE 258
            R  +  + +E+  ++DE
Sbjct: 394 CRTGKADQALEVFEKLDE 411



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LLD M+ +G+ P+   Y+ +I G C    +D+A EL  S+   GC  +++TYN 
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+          E   L SEM+S G +P VVT++ L   L    +VE A+ L   M+   
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+  I G C+ G +  A E    +    C   I  Y+ ++ GLC+ GK + A 
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403

Query: 181 ELFQSLPRVGLMPNV-----------------------------------VTYNIMIHGF 205
           E+F+ L  VG  PNV                                   +TYN +I   
Sbjct: 404 EVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCL 463

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C DG +D+A +L +DM++    PN V++N ++LG  + N  +  +E+L  M E+
Sbjct: 464 CRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEK 517



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 121/217 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  M ++G++P+A+ Y  LI GFC  G +D A E    M  +GC+ ++V YNT
Sbjct: 329 VEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNT 388

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G C+T   +++L ++ ++   G  P V +YNTLF  L+       AL++  ++ +  
Sbjct: 389 IMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQG 448

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ I  LC++G + EA EL   ++  +    + +Y+ ++ GLCK+ +   A 
Sbjct: 449 IDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAI 508

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           E+  ++   G  PN  TY ++I G    G   +A +L
Sbjct: 509 EVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 3/258 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  +L+  MI  G +PN   +S LI   C  G+++ A  L  SM   G   +   Y+ LI
Sbjct: 296 EGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLI 355

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C+   ++ +      M+S G  P +V YNT+  GL    + + AL++F+++      
Sbjct: 356 AGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCP 415

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              S+YNT    L  +G    A E+   L     +     Y+ LI  LC+ G ++ A EL
Sbjct: 416 PNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIEL 475

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +      PNVV+YNI++ G C   + + A ++   M  KG  PN  T+  L+ G   
Sbjct: 476 LVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGF 535

Query: 243 NNETSKVVEL---LHRMD 257
           +   ++ +EL   LH M+
Sbjct: 536 SGLRAEAMELANSLHGMN 553



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 1/258 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E+   L+ M+ +G  P+  + + LI GF  +  I +A  +   ++  G   +V  YN L
Sbjct: 86  NESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNAL 144

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+ K   +E +  +   M S+G  P VVTYN +        +++ AL++F+E+   + 
Sbjct: 145 ISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNC 204

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY   I+    +G I  A +L   +     E     Y+ +I G+CK   ++ A+E
Sbjct: 205 EPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFE 264

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L +SL   G  P+++TYNI++    + G+  +   L  +M + G  PN VT + L+    
Sbjct: 265 LLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLC 324

Query: 242 RNNETSKVVELLHRMDER 259
           R+ +  + V LL  M E+
Sbjct: 325 RDGKVEEAVNLLRSMKEK 342



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 95/186 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+  L+ MI  G  P+   Y+T++ G C TG+ D+A E+F  +D  GC  NV +YNT
Sbjct: 364 LDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +    + D   +L +  ++L++GI P  +TYN+L   L     V+ A++L  +MQ   
Sbjct: 424 LFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YN  + GLCK     +A E+   +    C+     Y  LI+G+   G    A 
Sbjct: 484 YRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAM 543

Query: 181 ELFQSL 186
           EL  SL
Sbjct: 544 ELANSL 549



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 34/230 (14%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI---------------------------------- 86
           L+N  C+     ESL     M+ KG                                   
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           +P V  YN L  G  + +Q+E+A ++ D M+      +  TYN  I   C  G +  A E
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +F  L    CE  +  Y+ LI+     G ++ A +L   +   GL P+ +TYN +I G C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +  +DKA +L   + ++G  P+ +T+N L+   +   + S+  +L+  M
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM 304


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 154/330 (46%), Gaps = 70/330 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  LLD M+ +G+ PN   Y+ +I G C  G +D A  +F  M       NVVTY+ 
Sbjct: 485 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 544

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ--------------- 105
           LI+G  K  D E++L+L+ +MLS  I PT  T+NT+ +GL ++ Q               
Sbjct: 545 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604

Query: 106 --------------------VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                               ++ AL ++ EM    V+    TY + I+G CK+  I  A 
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 664

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +    +R    EL + AYS LIDG CK   +E+A +LF  L  VGL PN + YN MI GF
Sbjct: 665 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724

Query: 206 ----------------------CN-------------DGQMDKAHDLFLDMEAKGVAPNC 230
                                 C+             +G++  A DL+++M +KG+ P+ 
Sbjct: 725 RDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDI 784

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +TF+ L+ G     +     ++L  MD +N
Sbjct: 785 ITFHVLVNGLCNKGQLENARKILEEMDRKN 814



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 139/246 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M + GV PN   Y++LI+GFC +  ID A +    M   G   +V  Y+ 
Sbjct: 625 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 684

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK +D+E + +L+ E+L  G+ P  + YN++  G  +++ +E AL  + +M +  
Sbjct: 685 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 744

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDGL K G +V A++L+  +        I  +  L++GLC  G+LE A 
Sbjct: 745 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 804

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + + R  + P+V+ YN +I G+  +G + +A  L  +M  +G+ P+ VT++ L+ G 
Sbjct: 805 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGK 864

Query: 241 IRNNET 246
            + + +
Sbjct: 865 FKGDRS 870



 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 153/295 (51%), Gaps = 39/295 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L D M+   + P  F ++T+I+G C  G++  AR+   +    G + + +TYN++
Sbjct: 556 EKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 615

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G+ K  +++ +L +Y EM   G+ P VVTY +L +G  + ++++ ALK  DEM+   +
Sbjct: 616 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 675

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL--------RV-------------------- 153
             + + Y+  IDG CK   +  A +LF  L        R+                    
Sbjct: 676 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALV 735

Query: 154 ---------LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                    + C+LG   Y+ LIDGL K G+L  A +L+  +   G++P+++T++++++G
Sbjct: 736 WYKKMINDRIPCDLG--TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNG 793

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            CN GQ++ A  +  +M+ K + P+ + +NTL+ G  R     +   L   M +R
Sbjct: 794 LCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 848



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA RL + MI  G   N  V ++L+ G+C  G +D A  LF  +  +G   N VTY+ 
Sbjct: 346 MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSV 405

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C + ++E++  LY++M   GI P+V   N+L  G  +    E A KLFDE     
Sbjct: 406 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 465

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   TYN  +  LCK G + EA  L   +        + +Y+ +I G C+ G ++ A 
Sbjct: 466 V-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 524

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +    L PNVVTY+I+I G    G  +KA DLF  M +  +AP   TFNT++ G 
Sbjct: 525 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 584

Query: 241 IRNNETSKVVELL 253
            +  + S+  + L
Sbjct: 585 CKVGQMSEARDKL 597



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 143/293 (48%), Gaps = 34/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L + + + G+ PN   YS LI+G C +G I++A EL+  M +NG   +V   N+
Sbjct: 381 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 440

Query: 61  LINGY----------------------------------CKTKDVEESLNLYSEMLSKGI 86
           L+ GY                                  CK   ++E+ +L   M+++G+
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 500

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P VV+YN +  G      ++ A  +F +M   D+     TY+  IDG  K G   +A +
Sbjct: 501 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 560

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LF  +  L        ++ +I+GLCK+G++  A +  ++    G +P+ +TYN ++ GF 
Sbjct: 561 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 620

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +G +D A  ++ +M   GV+PN VT+ +L+ G  ++N     ++    M E+
Sbjct: 621 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 673



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 34/290 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA        +RGV+ +A  YS +I   C     +   EL   M   G + +  T+ +
Sbjct: 276 VEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTS 335

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I       ++ E+L L  EM++ G    +V   +L  G      ++ AL LF+++    
Sbjct: 336 VIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDG 395

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV-----------------LKCELGIEA- 162
           +     TY+  I+G C +G I +A+EL+  +++                 LK  L  EA 
Sbjct: 396 LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS 455

Query: 163 ----------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           Y+ ++  LCK GK++ A  L  ++   G++PNVV+YN MI G C
Sbjct: 456 KLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHC 515

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G MD A  +F DM A+ + PN VT++ L+ G  +  ++ K ++L  +M
Sbjct: 516 RKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 565



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 107/235 (45%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
            + MI + V P     + L+        I   R+L+  M + G   +  T + ++    K
Sbjct: 213 FNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLK 272

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              VEE+   + E   +G++     Y+ +   + +       L+L +EM+        +T
Sbjct: 273 EGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEAT 332

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           + + I      G +VEA  L   +      + +   + L+ G C  G L++A  LF  + 
Sbjct: 333 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 392

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             GL PN VTY+++I G CN G ++KA +L+  M+  G+ P+    N+L+ G ++
Sbjct: 393 EDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 447



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 44/267 (16%)

Query: 32  LTGEIDRARELFVSMDINGCM-------HNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
           ++G+ D +  +FV   IN          H V  +N L+N Y +   +E +++ ++ M+ +
Sbjct: 162 VSGDSDPSPVVFVDHLINCAKRFDFELDHRV--FNYLLNAYIRANRIENAIDCFNAMICQ 219

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
            + P V   N L   L   + +     L+++M    +  +  T +  +    K G + EA
Sbjct: 220 DVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEA 279

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP----------- 193
            E FR  +    +L   AYS +I  +CK        EL + +   G +P           
Sbjct: 280 EEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVA 339

Query: 194 ------------------------NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
                                   N+V    ++ G+C  G +D A +LF  +   G+ PN
Sbjct: 340 CVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPN 399

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            VT++ L+ GC  +    K  EL  +M
Sbjct: 400 KVTYSVLIEGCCNSGNIEKASELYTQM 426



 Score = 37.4 bits (85), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 36/196 (18%), Positives = 71/196 (36%), Gaps = 17/196 (8%)

Query: 66  CKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVE-HALKLFDEMQHSDVAA 123
           C   D + +L  +      +G    V  Y  L H L    +   HA KL           
Sbjct: 109 CHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLL---------- 158

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
                N ++ G      +V    L    +    EL    ++ L++   +  ++E A + F
Sbjct: 159 -----NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCF 213

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            ++    ++P V   NI++        + +  DL+  M  +G+  +  T + ++  C++ 
Sbjct: 214 NAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKE 273

Query: 244 NETSKVVELLHRMDER 259
               +  E      ER
Sbjct: 274 GRVEEAEEYFRETKER 289


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 140/274 (51%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L + M + G+ P+ + Y+ LID FC  G I +AR  F  M  + C  NVVTY +
Sbjct: 469 VEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTS 528

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ--- 117
           LI+ Y K + V ++  L+  ML +G +P VVTY  L  G  +  Q++ A +++  MQ   
Sbjct: 529 LIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDI 588

Query: 118 -HSDV---------AAETS---TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
             SD+           ET    TY   +DGLCK   + EA EL  T+ V  CE     Y 
Sbjct: 589 ESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK GKLE A E+F  +   G  PN+ TY+ +I+    + ++D    +   M   
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN 708

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
              PN V +  ++ G  +  +T +   L+ +M+E
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEE 742



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 139/273 (50%), Gaps = 16/273 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  ++  M+ +G  P+   YS +I   C   ++++A  LF  M  NG + +V TY  L
Sbjct: 435 DKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTIL 494

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   ++++ N + EML     P VVTY +L H   +  +V  A KLF+ M     
Sbjct: 495 IDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGS 554

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLR----------VLK-----CEL-GIEAYSC 165
                TY   IDG CK G I +A +++  ++            K     CE   I  Y  
Sbjct: 555 KPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGA 614

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DGLCK  ++E A EL  ++   G  PN + Y+ +I GFC  G+++ A ++F+ M  +G
Sbjct: 615 LVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERG 674

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             PN  T+++L+    +      V+++L +M E
Sbjct: 675 YCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLE 707



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 128/241 (53%), Gaps = 2/241 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   Y  L+DG C    ++ A EL  +M +NGC  N + Y+ LI+G+CKT  +E +  +
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M  +G  P + TY++L + LF+  +++  LK+  +M  +        Y   IDGLCK
Sbjct: 667 FVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCK 726

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G   EA  L   +  + C   +  Y+ +IDG  KIGK+E   EL++ +   G  PN +T
Sbjct: 727 VGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFIT 786

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y ++I+  C+ G +D+AH L  +M+      +  ++  ++ G  R   TS  + LL  + 
Sbjct: 787 YRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITS--IGLLDELS 844

Query: 258 E 258
           E
Sbjct: 845 E 845



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 103/205 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LLD M   G  PN  VY  LIDGFC TG+++ A+E+FV M   G   N+ TY++
Sbjct: 625 VEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSS 684

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN   K K ++  L + S+ML     P VV Y  +  GL ++ + E A +L  +M+   
Sbjct: 685 LINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVG 744

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   IDG  K G I +  EL+R +    C      Y  LI+  C  G L+ A 
Sbjct: 745 CYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAH 804

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGF 205
            L   + +     ++ +Y  +I GF
Sbjct: 805 RLLDEMKQTYWPRHISSYRKIIEGF 829



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 6/255 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   ++L  M++    PN  +Y+ +IDG C  G+ + A  L + M+  GC  NV+TY  
Sbjct: 695 LDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTA 754

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+ K   +E+ L LY +M SKG  P  +TY  L +       ++ A +L DEM+ + 
Sbjct: 755 MIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTY 814

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                S+Y   I+G   N   + +  L   L   +       Y  LID   K G+LE A 
Sbjct: 815 WPRHISSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGAL 872

Query: 181 ELFQ---SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L +   S P + +  N   Y  +I    +  ++DKA +L+  M  K V P   TF  L+
Sbjct: 873 NLLEEISSSPSLAV-ANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLI 931

Query: 238 LGCIRNNETSKVVEL 252
            G  R  +  + ++L
Sbjct: 932 KGLTRVGKWQEALQL 946



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 129/308 (41%), Gaps = 57/308 (18%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L +M+  G  PN  ++++L+  +C + +   A +LF  M   GC    + YN  I   
Sbjct: 328 RILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSI 387

Query: 66  CKTKDV-----------------------------------------EESLNLYSEMLSK 84
           C  +++                                         +++  +  EM+SK
Sbjct: 388 CSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSK 447

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P   TY+ +   L +  +VE A  LF+EM+ + +     TY   ID  CK G I +A
Sbjct: 448 GFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQA 507

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
              F  +    C   +  Y+ LI    K  K+  A +LF+ +   G  PNVVTY  +I G
Sbjct: 508 RNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDG 567

Query: 205 FCNDGQMDKAHDLFL----DMEAKGV------------APNCVTFNTLMLGCIRNNETSK 248
            C  GQ+DKA  ++     D+E+  +             PN +T+  L+ G  + N   +
Sbjct: 568 HCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEE 627

Query: 249 VVELLHRM 256
             ELL  M
Sbjct: 628 AHELLDTM 635



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 16/275 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +    M+  GV  N    S      C  G+ D+A E+   M   G + +  TY+ 
Sbjct: 399 LELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSK 458

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   C    VE++  L+ EM   GI P+V TY  L     +   ++ A   FDEM   +
Sbjct: 459 VIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDN 518

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY + I    K   + +A +LF  + +   +  +  Y+ LIDG CK G+++ A 
Sbjct: 519 CTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKAC 578

Query: 181 ELFQSL------PRVGL----------MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           +++  +        + +           PN++TY  ++ G C   ++++AH+L   M   
Sbjct: 579 QIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVN 638

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G  PN + ++ L+ G  +  +     E+  +M ER
Sbjct: 639 GCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSER 673



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 6/241 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +LD M      PN   Y  L+ G    G++ R + +   M   GC  N   +N+L+
Sbjct: 290 EAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLV 349

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ------VEHALKLFDEM 116
           + YCK++D   +  L+ +M+  G +P  + YN     +    +      +E A K + EM
Sbjct: 350 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEM 409

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               V       + F   LC  G   +A E+   +           YS +I  LC   K+
Sbjct: 410 LDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKV 469

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A+ LF+ + + G++P+V TY I+I  FC  G + +A + F +M      PN VT+ +L
Sbjct: 470 EKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSL 529

Query: 237 M 237
           +
Sbjct: 530 I 530



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 4/229 (1%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           LI   C  G  + A E    +   G   +  TYN LI  + +   ++ +  ++ EM + G
Sbjct: 176 LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSG 235

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            R    T     + L +  +   AL L   ++  +   +T  YN  + GLC+     EA 
Sbjct: 236 FRMDGCTLGCFAYSLCKAGRCGDALSL---LEKEEFVPDTVFYNRMVSGLCEASLFQEAM 292

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++   +R + C   +  Y  L+ G    G+L     +   +   G  PN   +N ++H +
Sbjct: 293 DILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAY 352

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           C       A+ LF  M   G  P  + +N + +G I +NE     +LL 
Sbjct: 353 CKSRDYSYAYKLFKKMIKCGCQPGYLLYN-IFIGSICSNEELPGSDLLE 400



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 7/247 (2%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTG-EIDRARELFVSMDINGCMHNVVT--YNTLINGYCKTK 69
           Q G      VY+ LI+  C      DR    F+ M I      ++    N LI   C+  
Sbjct: 126 QIGYSHTPVVYNALIELLCCNAVNNDRVSHKFL-MQIRDDDRELLRKLLNFLIQKCCRNG 184

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
               +L     +   G + +  TYN L        +++ A  +  EM +S    +  T  
Sbjct: 185 MWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLG 244

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            F   LCK G   +A  L      +        Y+ ++ GLC+    + A ++   +  +
Sbjct: 245 CFAYSLCKAGRCGDALSLLEKEEFVP---DTVFYNRMVSGLCEASLFQEAMDILDRMRSI 301

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
             +PNVVTY I++ G    GQ+ +   +   M  +G  PN   FN+L+    ++ + S  
Sbjct: 302 SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYA 361

Query: 250 VELLHRM 256
            +L  +M
Sbjct: 362 YKLFKKM 368


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 131/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  ++  G  P+   Y++LIDG         A +LF  M + G + + V Y  
Sbjct: 216 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTA 275

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +   + ++ ++Y  M S+G  P VVT +T+  GL +  ++  A+++F  M+   
Sbjct: 276 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG 335

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A     Y+  I GLCK   +  A E+   ++   C      Y+ LIDGLCK G +E A 
Sbjct: 336 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 395

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +   G  P+V TYNI++ GFC  G  D A  +F DM +   +PN VT+ TL+ G 
Sbjct: 396 AFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGL 455

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  + +K       M ER 
Sbjct: 456 CKRRQLTKASLYFQHMKERG 475



 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 131/243 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M  RG+  +   Y+ LI G    G+I +A  ++ +M   GC+ +VVT +T+I
Sbjct: 253 EAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 312

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +  ++ ++  M ++G+ P  V Y+ L HGL +  +++ AL++  +M+ +   
Sbjct: 313 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 372

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +T TYN  IDGLCK+G +  A   F  +    C+  +  Y+ L+ G CK G  + A  +
Sbjct: 373 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGV 432

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +      PNVVTY  +I G C   Q+ KA   F  M+ +G  P+   +++L+ G  +
Sbjct: 433 FDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCK 492

Query: 243 NNE 245
           + +
Sbjct: 493 SGK 495



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 122/236 (51%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ ++D      +I  A  L   +  NGC   + TYN L+NG CK   +EE+++L  +++
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 227

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
             G  P VVTY +L  GL +  +   A KLF EM    +  +T  Y   I GL + G I 
Sbjct: 228 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A+ +++T+    C   +   S +IDGLCK G++  A  +F+S+   GL PN V Y+ +I
Sbjct: 288 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 347

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           HG C   +MD A ++   M+     P+ +T+N L+ G  ++ +          M E
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 403



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 124/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L++ +   G  P    Y+ L++G C  G ++ A +L   +  NGC  +VVTY +
Sbjct: 181 IQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 240

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K K   E+  L+ EM  +G+    V Y  L  GL +  ++  A  ++  M    
Sbjct: 241 LIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 300

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T +T IDGLCK G I  A  +F+++           YS LI GLCK  K++ A 
Sbjct: 301 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 360

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + +    P+ +TYNI+I G C  G ++ A   F +M   G  P+  T+N L+ G 
Sbjct: 361 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGF 420

Query: 241 IRNNETSKVVELLHRMDE 258
            +   T     +   M  
Sbjct: 421 CKAGNTDAACGVFDDMSS 438



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 121/254 (47%), Gaps = 1/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +AS +   M  +G  P+    ST+IDG C  G I  A  +F SM+  G   N V Y+ 
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 345

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK + ++ +L + ++M      P  +TYN L  GL +   VE A   FDEM  + 
Sbjct: 346 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 405

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  + G CK G    A  +F  +    C   +  Y  LI GLCK  +L  A 
Sbjct: 406 CKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKAS 465

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             FQ +   G  P+   Y+ ++ G C  G+++    LF +ME  GVA N  T   L+   
Sbjct: 466 LYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHL 524

Query: 241 IRNNETSKVVELLH 254
            + N   + V L +
Sbjct: 525 CKANRVDEAVSLFN 538



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 137/244 (56%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV P+   ++ ++ G C +G++  A + F +   NGC  ++ TY  +++   K K ++++
Sbjct: 125 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L  ++ + G  PT+ TYN L +GL ++ ++E A+ L  ++  +    +  TY + IDG
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L K     EA +LF+ + +    L    Y+ LI GL + GK+  A  +++++   G +P+
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 304

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVT + MI G C  G++  A  +F  MEA+G+APN V ++ L+ G  +  +    +E+L 
Sbjct: 305 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364

Query: 255 RMDE 258
           +M +
Sbjct: 365 QMKK 368



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYNTL 61
           EA  LL   +     P+   ++ LI G+CL  E + A  +   M+ + G   ++ T+N +
Sbjct: 77  EAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLV 136

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G CK+  V  +++ +    + G    + TY  +   L +  +++ A+ L +++  +  
Sbjct: 137 LHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGC 196

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TYN  ++GLCK G + EA +L R +    C   +  Y+ LIDGL K  +   A++
Sbjct: 197 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 256

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+ +   GL+ + V Y  +I G    G++ +A  ++  M ++G  P+ VT +T++ G  
Sbjct: 257 LFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLC 316

Query: 242 RNNETSKVVELLHRMDERN 260
           +       V +   M+ R 
Sbjct: 317 KAGRIGAAVRIFKSMEARG 335



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 8/215 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  +L  M +    P+   Y+ LIDG C +G+++ AR  F  M   GC  +V TYN 
Sbjct: 356 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 415

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK  + + +  ++ +M S    P VVTY TL  GL +  Q+  A   F  M+   
Sbjct: 416 LVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERG 475

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI---EAYSCLIDGLCKIGKLE 177
              ++  Y++ +DGLCK+G +     LF  +       G+   +  + LI  LCK  +++
Sbjct: 476 CPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME----RSGVANSQTRTRLIFHLCKANRVD 531

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
            A  LF ++ + G MP+   YN +I       +++
Sbjct: 532 EAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAKVN 565



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 3/229 (1%)

Query: 35  EIDRARELF--VSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
           + D A ELF  +S    G  H+V T N L++ + +TK   E+ NL    L+    P V T
Sbjct: 37  DADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVET 96

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           +N L  G     + E A  +  EM+    VA    T+N  + GLCK+G ++ A + F T 
Sbjct: 97  WNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETT 156

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
               C + I  Y+ ++D L K  K++ A  L + +   G  P + TYN +++G C  G++
Sbjct: 157 TTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRL 216

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++A DL   +   G  P+ VT+ +L+ G  +   + +  +L   M  R 
Sbjct: 217 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 265



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G + +    + L+D F  T     A  L  +      + +V T+N LI GYC  ++ EE+
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 75  LNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
             +  EM    G+ P++ T+N + HGL +  +V  A+  F+    +    +  TY   +D
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            L KN  I +A  L   +    C   I  Y+ L++GLCK+G+LE A +L + +   G  P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VVTY  +I G   + +  +A+ LF +M  +G+  + V +  L+ G ++  +  +   + 
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 254 HRMDERN 260
             M  + 
Sbjct: 294 KTMTSQG 300



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL--PRVGLMPNVVTYN 199
           +EAA + R  R +  +  ++ + CL D        + AWELFQ L  PR G   +V T N
Sbjct: 12  IEAA-VGRLRREISTDAVVKIFQCLKDA-------DLAWELFQCLSSPRFGFQHSVHTGN 63

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            ++  F    +  +A +L  +  A    P+  T+N L+ G     E  +   ++  M+E
Sbjct: 64  ALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEE 122


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 136/251 (54%), Gaps = 3/251 (1%)

Query: 3   EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA+R L + M  RG+ P+   Y+++IDGF   G +D     F  M    C  +V+TYN L
Sbjct: 147 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 206

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +CK   +   L  Y EM   G++P VV+Y+TL     +   ++ A+K + +M+   +
Sbjct: 207 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 266

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY + ID  CK G + +A  L   +  +  E  +  Y+ LIDGLC   +++ A E
Sbjct: 267 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 326

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-- 239
           LF  +   G++PN+ +YN +IHGF     MD+A +L  +++ +G+ P+ + + T + G  
Sbjct: 327 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 386

Query: 240 CIRNNETSKVV 250
            +   E +KVV
Sbjct: 387 SLEKIEAAKVV 397



 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL + M+Q GV  N   Y+ LIDG C    +  A ELF  MD  G + N+ +YN 
Sbjct: 286 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 345

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K K+++ +L L +E+  +GI+P ++ Y T   GL  + ++E A  + +EM+   
Sbjct: 346 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 405

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A +  Y T +D   K+G   E   L   ++ L  E+ +  +  LIDGLCK   +  A 
Sbjct: 406 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 465

Query: 181 ELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + F  +    GL  N   +  MI G C D Q++ A  LF  M  KG+ P+   + +LM G
Sbjct: 466 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 525

Query: 240 CIRNNETSKVVELLHRMDE 258
             +     + + L  +M E
Sbjct: 526 NFKQGNVLEALALRDKMAE 544



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +    M +  V P     + L+  F   G+ D  +  F  M   G    V TYN 
Sbjct: 76  LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 135

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK  DVE +  L+ EM  +G+ P  VTYN++  G  ++ +++  +  F+EM+   
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 195

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  I+  CK G +    E +R ++    +  + +YS L+D  CK G ++ A 
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 255

Query: 181 ELFQSLPRVGLMP-----------------------------------NVVTYNIMIHGF 205
           + +  + RVGL+P                                   NVVTY  +I G 
Sbjct: 256 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 315

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C+  +M +A +LF  M+  GV PN  ++N L+ G ++     + +ELL+ +  R
Sbjct: 316 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 369



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 119/241 (49%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   Y+ LI+ FC  G++    E +  M  NG   NVV+Y+TL++ +CK   +++++  
Sbjct: 198 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 257

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y +M   G+ P   TY +L     +I  +  A +L +EM    V     TY   IDGLC 
Sbjct: 258 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 317

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              + EA ELF  +        + +Y+ LI G  K   ++ A EL   L   G+ P+++ 
Sbjct: 318 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 377

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y   I G C+  +++ A  +  +M+  G+  N + + TLM    ++   ++ + LL  M 
Sbjct: 378 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 437

Query: 258 E 258
           E
Sbjct: 438 E 438



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 93/189 (49%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C+     ++ L +       +EE++  +S+M    + P   + N L H   ++ + + 
Sbjct: 54  NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 113

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
             + F +M  +       TYN  ID +CK G +  A  LF  ++          Y+ +ID
Sbjct: 114 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 173

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  K+G+L+     F+ +  +   P+V+TYN +I+ FC  G++    + + +M+  G+ P
Sbjct: 174 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 233

Query: 229 NCVTFNTLM 237
           N V+++TL+
Sbjct: 234 NVVSYSTLV 242



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 36/232 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  LL+ +  RG++P+  +Y T I G C   +I+ A+ +   M   G   N + Y T
Sbjct: 356 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 415

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY--------------------------- 93
           L++ Y K+ +  E L+L  EM    I  TVVT+                           
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 475

Query: 94  ---------NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
                      +  GL + +QVE A  LF++M    +  + + Y + +DG  K G ++EA
Sbjct: 476 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 535

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
             L   +  +  +L + AY+ L+ GL    +L+ A    + +   G+ P+ V
Sbjct: 536 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 587



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 15/174 (8%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET-----STYNTFIDG- 134
           M   G + +V +Y  + H LF       A  +  EM  S    +      ST N  + G 
Sbjct: 1   MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 60

Query: 135 ---------LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
                    L   G + EA + F  ++  +      + + L+    K+GK +     F+ 
Sbjct: 61  GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +   G  P V TYNIMI   C +G ++ A  LF +M+ +G+ P+ VT+N+++ G
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174


>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 129/244 (52%), Gaps = 8/244 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A R+   M  RG  P+++ Y TLI G C  G+I  A+ELF  M+   C   VVTY +
Sbjct: 172 MDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXS 231

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C++KD++ ++ L  EM SKGI+P V TY++L  G  +      AL+L D M    
Sbjct: 232 LIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+T + GLCK G + EA E+   +++         Y  +I G C I K   A 
Sbjct: 292 HLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAA 351

Query: 181 ELFQSLPRVGLMPNVVTY-------NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
                +   G+ PN +T+       NI++ G C +   ++A  L+L M  +G++ +  TF
Sbjct: 352 NFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE-HPNRAFQLYLSMRTRGISIDAKTF 410

Query: 234 NTLM 237
           ++L+
Sbjct: 411 DSLV 414



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 1/232 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCL-TGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           A R    M + G+ P+    + LI   C  +G +D A  +F  M   GC  +  TY TLI
Sbjct: 139 ALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLI 198

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+   + E+  L+ EM +K   PTVVTY +L HGL +   ++ A++L +EM    + 
Sbjct: 199 XGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIK 258

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY++ +DG CK+G    A EL   +   +    +  YS L+ GLCK GKL+ A E+
Sbjct: 259 PNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEI 318

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
              +   GL P+   Y  +I GFC+  +  +A +   +M   G++PN +T++
Sbjct: 319 LDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWS 370



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 1/247 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G R +   +S +I           A EL   M    C      + ++   Y +     ++
Sbjct: 45  GFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDA 104

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + ++ +M      P+  +Y T+F  L   +Q++ AL+ +  M+   +    ++ N  I  
Sbjct: 105 VRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKA 164

Query: 135 LCKNGYIVEAA-ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           LCKN   ++AA  +FR +    C      Y  LI GLC++GK+  A ELF+ +      P
Sbjct: 165 LCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSP 224

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            VVTY  +IHG C    +D A  L  +M +KG+ PN  T+++LM G  ++  +S+ +ELL
Sbjct: 225 TVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELL 284

Query: 254 HRMDERN 260
             M  R 
Sbjct: 285 DMMVSRR 291



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYS-------TLIDGFCLTGEIDRARELFVSMDINGCMHNV 55
           EA+  LD M+  G+ PN   +S        ++ G C T   +RA +L++SM   G   + 
Sbjct: 349 EAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDA 407

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
            T+++L+N +C   D+ ++ +L  EM+  G  P   T+N +    ++  +V  + +L
Sbjct: 408 KTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAEL 464



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 41/76 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A +L   M  RG+  +A  + +L++ FC  G++ +A  L   M ++GC+ +  T+N +
Sbjct: 389 NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAV 448

Query: 62  INGYCKTKDVEESLNL 77
           +  +   + V ES  L
Sbjct: 449 VCAFWDRRKVRESAEL 464


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 132/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L   M +RG +P+   Y+ L+D  C  G +  AR+LF  M  +GC  +  TY+T
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYST 245

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K+  VEE+  ++ EM+ +G+   +V YN+L   L +   ++   KL  EM    
Sbjct: 246 LVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKG 305

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  ++NT +D L K      A E+F  +    C+  + +Y+ LID   + G    A 
Sbjct: 306 FHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQAR 365

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + +   G +P   TYN +IH    DGQ+D+A  +  +ME  G  P+ VT+N LM   
Sbjct: 366 QMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDML 425

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  E  +   L  +M ++ 
Sbjct: 426 GKRGENQRAARLFQQMKDKG 445



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 128/248 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++Q+G + + F Y+ LI  F  +G++D A E+F  M I G   +  TY  L+N   K   
Sbjct: 91  LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E+ + +  ML +G+ P + TYN L     ++ Q++ AL LF EM+         TYN 
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +D LC  G +  A +LF  +    C      YS L++GL K G++E A ++F+ +   G
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           +  ++V YN ++      G MD+   L  +M  KG  P+  +FNT+M    + N+     
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330

Query: 251 ELLHRMDE 258
           E+  RM E
Sbjct: 331 EVFARMVE 338



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 133/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M  +G  P+ + Y  L++     G +  AR  F +M   G   N+ TYN 
Sbjct: 116 LDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNL 175

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ + K   ++ +L L++EM  +G +P+VVTYN L   L    +V  A KLF +M    
Sbjct: 176 LMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + ++ TY+T ++GL K+G + EA ++FR +      + +  Y+ L+  L K G ++  W
Sbjct: 236 CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + + R G  P+  ++N ++       + D A ++F  M   G  P+ +++N L+   
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSY 355

Query: 241 IRNNETSKVVELLHRMDE 258
            R  + ++  ++L  M E
Sbjct: 356 ARFGDAAQARQMLEEMVE 373



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 120/243 (49%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P    ++ LID    +GE +RA  ++  +   GC  +   YN LI  + ++  ++ ++ +
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + EM  KG  P   TY  L + L +  +V+ A   FD M    +     TYN  +D   K
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G +  A  LF  ++    +  +  Y+ L+D LC  G++  A +LF  +   G  P+  T
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y+ +++G    G++++AH +F +M  +GVA + V +N+L+    +     +V +L+  M 
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMS 302

Query: 258 ERN 260
            + 
Sbjct: 303 RKG 305



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 122/254 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++   M+ RGV  +   Y++L+      G +DR  +L   M   G   +  ++NT
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNT 315

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++   K    + +  +++ M+  G +P +++YN L            A ++ +EM  + 
Sbjct: 316 IMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG 375

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              ET TYN+ I  L  +G + EA  +   +    C   +  Y+ L+D L K G+ + A 
Sbjct: 376 FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAA 435

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LFQ +   G+ P+ ++Y + I G   D ++D+A  LF DM+A G   +   +  L+   
Sbjct: 436 RLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAA 495

Query: 241 IRNNETSKVVELLH 254
            R  +T    +L H
Sbjct: 496 HRAGDTELEAQLKH 509



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 4/262 (1%)

Query: 1   MDEASRLLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +D    LL  M+  G  +RPN  V   LI  +    +   A +LF   +   C   V  +
Sbjct: 11  LDPLETLLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
             LI+    + + E +  +Y +++ KG +     YN L        Q++ A+++F EM+ 
Sbjct: 69  TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                +  TY   ++ L K G + EA   F  +        I  Y+ L+D   K+G+L+ 
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  LF  + R G  P+VVTYNI++   C+ G++  A  LF  M   G +P+  T++TL+ 
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G  ++    +  ++   M +R 
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRG 270



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 100/223 (44%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           G +D    L   M   G      T   LI  Y +     ++ +L+++  S    PTV  +
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
             L   L    + E A  ++ ++       +   YN  I    ++G +  A E+FR +++
Sbjct: 69  TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
              E     Y  L++ L K G+++ A   F ++   GL PN+ TYN+++  F   GQ+D 
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           A  LF +M+ +G  P+ VT+N L+             +L H+M
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKM 231



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 54/127 (42%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ M   G RP+   Y+ L+D     GE  RA  LF  M   G   + ++Y  
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G      ++E+L L+ +M + G       Y  L          E   +L  E Q   
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQFMP 515

Query: 121 VAAETST 127
           V +  ++
Sbjct: 516 VESRLTS 522


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 134/252 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + M  RG++PNA V++ LID  C  G+ +   EL   M   G   + VTYN 
Sbjct: 202 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 261

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG C+ +D++ +  +  EM S G+RP  VTY TL  G  +  +++ A+++   M    
Sbjct: 262 IVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 321

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   I GL K G   +A  +   +     E     Y+ +ID  C+ G ++T  
Sbjct: 322 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGL 381

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G  P VVTYN++++GFC  GQM  A  L   M   GV+P+ +T+N L+ G 
Sbjct: 382 RLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGH 441

Query: 241 IRNNETSKVVEL 252
            ++ + + + EL
Sbjct: 442 CKHGKVTDIEEL 453



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 124/248 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G+ P A +++ L+      GE+  A+ +F  M   G    VV++NT+I+G C+  D
Sbjct: 107 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGD 166

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +  L+  M   G+ P V TY  L  GL  + ++E A  +F++M    +      +  
Sbjct: 167 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 226

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK G      EL R +R          Y+ +++GLC+   L++A  +   +   G
Sbjct: 227 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 286

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ VTY  +I G+C + ++D A ++  +M A+GV  + VT+  L+ G  +   ++   
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 346

Query: 251 ELLHRMDE 258
            +L  M E
Sbjct: 347 RVLGEMME 354



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 120/257 (46%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D M  RGVR     ++T+I G C  G++D A  L   M   G   +V TY  LI 
Sbjct: 135 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 194

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C+   +E++  ++ +M  +G++P  V +  L     +    E  L+L  EM+   V  
Sbjct: 195 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRP 254

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYN  ++GLC+   +  A+ +   +R          Y+ LIDG CK  +L+ A E+ 
Sbjct: 255 DAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIK 314

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q++   G+  + VTY  +I G    G+   A  +  +M   G+ P+  T+  ++    R 
Sbjct: 315 QNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRK 374

Query: 244 NETSKVVELLHRMDERN 260
            +    + LL  M  + 
Sbjct: 375 GDVKTGLRLLKEMQNKG 391



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 87/173 (50%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E+   Y ++L  G+ P    +N L   L  + ++  A  +FDEMQ   V     ++NT I
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
            G+C+ G +  A  L R +        +  Y  LI GLC++G++E A  +F+ +   G+ 
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           PN V + I+I   C  G  +   +L  +M  +GV P+ VT+N ++ G  R  +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARD 271



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RLL  M  +G +P    Y+ +++GFC  G++  A  L  +M   G   + +TYN L++G+
Sbjct: 382 RLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGH 441

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           CK   V +   L S   +KG  P +  Y ++
Sbjct: 442 CKHGKVTDIEELKS---AKGTVPDLGVYTSI 469


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 145/310 (46%), Gaps = 52/310 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +  + M + G  PN   Y+ LI  +    ++  A ELF +M   GC+ N+VTY+ 
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593

Query: 61  LINGYCKTKDVEESLNLYSEML-SKGI----------------RPTVVTYNTLFHGLFEI 103
           LI+G+CK   +E++  ++  M  SK +                RP VV Y  L  G  ++
Sbjct: 594 LIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKL 653

Query: 104 HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL---------------- 147
           H+VE A KL D M           Y+  IDGLCK G + EA E+                
Sbjct: 654 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTY 713

Query: 148 -------FRTLR------VLK------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
                  F+  R      VL       C   +  Y+ +IDGLCK+GK + A++L Q +  
Sbjct: 714 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 773

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  PNVVTY  MI GF   G+++   +L   M +KGVAPN VT+  L+  C +N     
Sbjct: 774 KGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 833

Query: 249 VVELLHRMDE 258
              LL  M +
Sbjct: 834 AHNLLEEMKQ 843



 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 142/311 (45%), Gaps = 52/311 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L + M + G+  + + Y+ ++D FC  G I++AR+ F  M   GC  NVVTY  
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           LI+ Y K K V  +  L+  MLS+G  P +VTY+ L  G  +  Q+E A ++F+ M    
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSK 618

Query: 117 ----------QHSDVAAETST---YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
                     Q+ D  +E      Y   +DG CK   + EA +L   + +  CE     Y
Sbjct: 619 DVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVY 678

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGL-------------------------------- 191
             LIDGLCK+GKL+ A E+   +   G                                 
Sbjct: 679 DALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 738

Query: 192 ---MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
               PNVV Y  MI G C  G+ D+A+ L   ME KG  PN VT+  ++ G  R  +   
Sbjct: 739 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIET 798

Query: 249 VVELLHRMDER 259
            +ELL RM  +
Sbjct: 799 CLELLERMGSK 809



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 136/324 (41%), Gaps = 72/324 (22%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING---------- 50
           ++EA +LLD M   G  PN  VY  LIDG C  G++D A+E+   M  +G          
Sbjct: 656 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSS 715

Query: 51  -------------------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                    C  NVV Y  +I+G CK    +E+  L   M  KG
Sbjct: 716 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 775

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG------ 139
            +P VVTY  +  G   I ++E  L+L + M    VA    TY   ID  CKNG      
Sbjct: 776 CQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 835

Query: 140 ----------YIVEAA-----------ELFRTLRVLKCELG-------IEAYSCLIDGLC 171
                     +   AA           E   +L +L  E+G       +  Y  L+D L 
Sbjct: 836 NLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLD-EIGQDDTAPFLSLYRLLVDNLI 894

Query: 172 KIGKLETAWELFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           K  +LE A  L + +      L+    TYN +I   C   ++DKA  LF +M  KGV P 
Sbjct: 895 KAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPE 954

Query: 230 CVTFNTLMLGCIRNNETSKVVELL 253
             TF +L+ G  RN++ S+ + LL
Sbjct: 955 MQTFCSLIKGLFRNSKISEALLLL 978



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 20/269 (7%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  ++  MI +G  P+   YS ++   C   +++ A  LF  M   G + +V TY  +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK   +E++   ++EM   G  P VVTY  L H   +  +V +A +LF+ M     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL----RVLKCEL-------------GIEAYS 164
                TY+  IDG CK G + +A ++F  +     V   ++              +  Y 
Sbjct: 585 LPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYG 644

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            L+DG CK+ ++E A +L  ++   G  PN + Y+ +I G C  G++D+A ++  +M   
Sbjct: 645 ALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEH 704

Query: 225 GVAPNCVTFNTLM---LGCIRNNETSKVV 250
           G      T+++L+       R +  SKV+
Sbjct: 705 GFPATLYTYSSLIDRYFKVKRQDLASKVL 733



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 133/309 (43%), Gaps = 58/309 (18%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L++M+  G  P+  ++++L+  +C +G+   A +L   M   G     V YN LI   
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSI 417

Query: 66  CKTKD-----------------------------------------VEESLNLYSEMLSK 84
           C  KD                                          E++ ++  EM+ +
Sbjct: 418 CGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P   TY+ +   L    ++E A  LF+EM+   + A+  TY   +D  CK G I +A
Sbjct: 478 GFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            + F  +R + C   +  Y+ LI    K  K+  A ELF+++   G +PN+VTY+ +I G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597

Query: 205 FCNDGQMDKAHDLF-----------LDMEAK------GVAPNCVTFNTLMLGCIRNNETS 247
            C  GQM+KA  +F           +DM  K         PN V +  L+ G  + +   
Sbjct: 598 HCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVE 657

Query: 248 KVVELLHRM 256
           +  +LL  M
Sbjct: 658 EARKLLDAM 666



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 117/272 (43%), Gaps = 17/272 (6%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +    M+  GV  N    S+     C  G+ ++A  +   M   G + +  TY+ ++ 
Sbjct: 432 AEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLG 491

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    +E +  L+ EM   G+   V TY  +     +   +E A K F+EM+      
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   I    K   +  A ELF T+    C   I  YS LIDG CK G++E A ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIF 611

Query: 184 QSL------PRVGLM-----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           + +      P V +            PNVV Y  ++ GFC   ++++A  L   M  +G 
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGC 671

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            PN + ++ L+ G  +  +  +  E+   M E
Sbjct: 672 EPNQIVYDALIDGLCKVGKLDEAQEVKAEMSE 703



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 3/198 (1%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+  YC++     +L     +     RP+  TYN L     +   ++ A  +  EM  
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           +++  +  T   +   LCK G   EA  L  T   +        Y+ LI GLC+    E 
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVP---DTVFYTKLISGLCEASLFEE 320

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +    +     +PNVVTY+ ++ G  N  Q+ +   +   M  +G  P+   FN+L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 239 GCIRNNETSKVVELLHRM 256
               + + S   +LL +M
Sbjct: 381 AYCTSGDHSYAYKLLKKM 398



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 93/242 (38%), Gaps = 13/242 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL D       RP+   Y+ LI  F     +D A  +   M +     +  T   
Sbjct: 220 LEELGRLKDFRF----RPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRC 275

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
                CK     E+L L   M ++   P  V Y  L  GL E    E A+   + M+ + 
Sbjct: 276 YAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+T + G      +     +   + +  C    + ++ L+   C  G    A+
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ------MDKAHDLFLDMEAKGVAPNCVTFN 234
           +L + + + G  P  V YNI+I   C D        ++ A   + +M A GV  N +  +
Sbjct: 393 KLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVS 452

Query: 235 TL 236
           + 
Sbjct: 453 SF 454



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 4/229 (1%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           L+  +C +G    A E    +       +  TYN LI  + K   ++ +  ++ EM    
Sbjct: 206 LVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLAN 265

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           +R    T     + L ++ +   AL L   M+  +   +T  Y   I GLC+     EA 
Sbjct: 266 LRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEEAM 322

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +    +R   C   +  YS L+ G     +L     +   +   G  P+   +N ++H +
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           C  G    A+ L   M   G  P  V +N +++G I  ++ S    LL 
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHTPGYVVYN-ILIGSICGDKDSLSCHLLE 430



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 72/189 (38%), Gaps = 39/189 (20%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+ M  +GV PN   Y  LID  C  G +D A  L   M       +   Y  +I G+ 
Sbjct: 802 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF- 860

Query: 67  KTKDVEESLNLYSEMLSKGIRP---------------------------------TVV-- 91
             K+  ESL L  E+      P                                 T+V  
Sbjct: 861 -NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDY 919

Query: 92  --TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
             TYN+L   L   ++V+ A +LF EM    V  E  T+ + I GL +N  I EA  L  
Sbjct: 920 SSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLD 979

Query: 150 TLRVLKCEL 158
            +  + C L
Sbjct: 980 FISHMVCPL 988



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNT 60
           E+  LLD + Q    P   +Y  L+D       ++ A  L   V+      +    TYN+
Sbjct: 866 ESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 925

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           LI   C    V+++  L+SEM  KG+ P + T+ +L  GLF   ++  AL L D + H
Sbjct: 926 LIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISH 983



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 38/207 (18%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G + T   YN L   +      +   +L  +++  D        N  +   C++G    A
Sbjct: 160 GYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIA 219

Query: 145 AELFRTLRVLKCELGIEAYSCLI--------------------------DG--------- 169
            E    L+  +       Y+CLI                          DG         
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYS 279

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCK+GK   A  L ++      +P+ V Y  +I G C     ++A D    M A    PN
Sbjct: 280 LCKVGKWREALTLMET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            VT++TL+ GC+   +  +   +L+ M
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMM 363


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 151/292 (51%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA + L  ++  G+ P+ F Y+TLIDG+C  G +  A ++       G + +  TY +LI
Sbjct: 304 EAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLI 363

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+  +++ +L L++  L KG++PTV+ YN L  GL +   +  AL++ +EM  +  +
Sbjct: 364 NGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCS 423

Query: 123 AETSTYNTFIDGLCKNGYIVEAAEL---------------FRTL-----RVLKCELGIE- 161
           ++  TYN  I+GLCK G + +A  L               F TL     + LK E  I+ 
Sbjct: 424 SDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQI 483

Query: 162 --------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                          Y+ +++GL K  K E   E F+++   G +PN +TYNI+    C 
Sbjct: 484 LNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCK 543

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            G++++A DL  ++  KG+ P+ V+F T++ G   N +     +L  RM E+
Sbjct: 544 AGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQ 595



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 132/255 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RLL+ M+ +G + NA  Y T++ GF        A ELF  M   G   +V T+N L++
Sbjct: 165 ALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLH 224

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK  +V+ES  L +++L KG+   + T+N    GL     +  A+ + D +    +  
Sbjct: 225 TLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTP 284

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCKN  +VEA +    L     E     Y+ LIDG CK+G L+ A ++ 
Sbjct: 285 DVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKIL 344

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           Q     G +P+  TY  +I+G C + ++D+A  LF     KG+ P  + +N L+ G  + 
Sbjct: 345 QGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQE 404

Query: 244 NETSKVVELLHRMDE 258
               + +++++ M E
Sbjct: 405 GLILQALQMMNEMSE 419



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 130/256 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +LD +I+ G+ P+   Y+TLI G C    +  A +    +   G   +  TYNTLI+
Sbjct: 270 AMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK   ++ +  +    + KG  P   TY +L +GL +  +++ AL LF+      +  
Sbjct: 330 GYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKP 389

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YN  I GLC+ G I++A ++   +    C   I  Y+ +I+GLCK+G +  A  L 
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM 449

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
                 G +P+V T+N +I G+C   +M+    +   M + GV P+ +T+N+++ G  + 
Sbjct: 450 NDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKA 509

Query: 244 NETSKVVELLHRMDER 259
            +   ++E    M E+
Sbjct: 510 VKNEDLMETFETMVEK 525



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E+ RLL+ ++++G+  N F ++  I G C  G +  A  +  S+   G   +VVTYNT
Sbjct: 232 VQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNT 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK  +V E+     ++++ G+ P   TYNTL  G  ++  +++A K+        
Sbjct: 292 LICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKG 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY + I+GLC+N  I  A  LF        +  +  Y+ LI GLC+ G +  A 
Sbjct: 352 FVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQAL 411

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G   ++ TYN++I+G C  G +  A++L  D  AKG  P+  TFNTL+ G 
Sbjct: 412 QMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGY 471

Query: 241 IRNNETSKVVELLHRM 256
            +  +    +++L++M
Sbjct: 472 CKQLKMETTIQILNKM 487



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 127/238 (53%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L +  + +G++P   +Y+ LI G C  G I +A ++   M  NGC  ++ TYN 
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNL 431

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   V ++ NL ++ ++KG  P V T+NTL  G  +  ++E  +++ ++M    
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYN+ ++GL K     +  E F T+    C      Y+ L + LCK GK+  A 
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEAL 551

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLM 237
           +L   +   G+ P+ V++  +I GF N+G +  A+ LF  M E   V+    T+N ++
Sbjct: 552 DLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMI 609



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ L++  I +G  P+ F ++TLIDG+C   +++   ++   M  +G   +V+TYN+
Sbjct: 442 VSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNS 501

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG  K    E+ +  +  M+ KG  P  +TYN L   L +  +V  AL L DE+ +  
Sbjct: 502 VLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG 561

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  +T ++ T I G   NG +  A +LFR +    K       Y+ +I+   +   L   
Sbjct: 562 ITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMG 621

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LF  +   G  P+  TY +MI GFC  G  D  +   L+M  KG  P+  TF  ++  
Sbjct: 622 EKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINC 681

Query: 240 CIRNNETSKVVELLHRM 256
               +   + V+++H M
Sbjct: 682 LCVQHRVHEAVDIIHFM 698



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 123/252 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++   M   G+ P+ + ++  I  FC T     A  L  +M   GC  N V Y T++
Sbjct: 129 QAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVV 188

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+ +     E+  L+++ML  GI P V T+N L H L +  +V+ + +L +++    + 
Sbjct: 189 AGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMC 248

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           +   T+N FI GLC+ G +  A  +  ++        +  Y+ LI GLCK   +  A + 
Sbjct: 249 SNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKY 308

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L   GL P+  TYN +I G+C  G +  A  +      KG  P+  T+ +L+ G  +
Sbjct: 309 LHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQ 368

Query: 243 NNETSKVVELLH 254
           N+E  + + L +
Sbjct: 369 NDEIDRALALFN 380



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 2/240 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M      P+   Y+ +++    +G   +A ++F+ M   G + +V T+  
Sbjct: 92  VQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTI 151

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I  +C+TK    +L L + M+S+G +   V Y T+  G +E +    A +LF++M    
Sbjct: 152 RIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIG 211

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +  + ST+N  +  LCK G + E+  L  + L+   C   +  ++  I GLC+ G L  A
Sbjct: 212 IFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS-NLFTFNIFIQGLCRKGMLSGA 270

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +  S+ R GL P+VVTYN +I G C +  + +A      +   G+ P+  T+NTL+ G
Sbjct: 271 MSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDG 330



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 1/232 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+   ++L+ M   GV P+   Y+++++G     + +   E F +M   GC+ N +TYN 
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNI 536

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHS 119
           L    CK   V E+L+L  E+L+KGI P  V++ T+  G      ++ A +LF  M +  
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY 596

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V+  T+TYN  I+   +   +    +LF  +    C      Y  +IDG C  G  ++ 
Sbjct: 597 KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSG 656

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           ++    +   G +P++ T+  +I+  C   ++ +A D+   M   G+ P  V
Sbjct: 657 YKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 113/235 (48%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           VY   +  +   G++  A ++F  MD   C  +V++YN ++N   ++   +++  ++  M
Sbjct: 78  VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            + GI P V T+           +   AL+L + M           Y T + G  +  Y 
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
           VEA ELF  +  +     +  ++ L+  LCK G+++ +  L   + + G+  N+ T+NI 
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           I G C  G +  A  +   +  +G+ P+ VT+NTL+ G  +N+   +  + LH++
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A  LF  M   G + N VT+ T
Sbjct: 187 LDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + +  +RP+   ++TL++G+   G++D    L  +M ++G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +         Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M   G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMII 388



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 125/242 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++       +VV++NTL+NGY K  D++E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M   G++P V TY+ L +GL +  +++ A  LFDEM    +     T+ T IDG
Sbjct: 191 FRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +    +RP+VV++NTL +G  ++  ++   +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A  LF  +           ++ LIDG CK G+++
Sbjct: 199 VSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++V   +  +  YS LI+GLCK  K++ A  LF  +   GL+PN V
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 136/251 (54%), Gaps = 3/251 (1%)

Query: 3   EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA+R L + M  RG+ P+   Y+++IDGF   G +D     F  M    C  +V+TYN L
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN +CK   +   L  Y EM   G++P VV+Y+TL     +   ++ A+K + +M+   +
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY + ID  CK G + +A  L   +  +  E  +  Y+ LIDGLC   +++ A E
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-- 239
           LF  +   G++PN+ +YN +IHGF     MD+A +L  +++ +G+ P+ + + T + G  
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518

Query: 240 CIRNNETSKVV 250
            +   E +KVV
Sbjct: 519 SLEKIEAAKVV 529



 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL + M+Q GV  N   Y+ LIDG C    +  A ELF  MD  G + N+ +YN 
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K K+++ +L L +E+  +GI+P ++ Y T   GL  + ++E A  + +EM+   
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A +  Y T +D   K+G   E   L   ++ L  E+ +  +  LIDGLCK   +  A 
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597

Query: 181 ELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + F  +    GL  N   +  MI G C D Q++ A  LF  M  KG+ P+   + +LM G
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657

Query: 240 CIRNNETSKVVELLHRMDE 258
             +     + + L  +M E
Sbjct: 658 NFKQGNVLEALALRDKMAE 676



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +    M +  V P     + L+  F   G+ D  +  F  M   G    V TYN 
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK  DVE +  L+ EM  +G+ P  VTYN++  G  ++ +++  +  F+EM+   
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  I+  CK G +    E +R ++    +  + +YS L+D  CK G ++ A 
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387

Query: 181 ELFQSLPRVGLMP-----------------------------------NVVTYNIMIHGF 205
           + +  + RVGL+P                                   NVVTY  +I G 
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C+  +M +A +LF  M+  GV PN  ++N L+ G ++     + +ELL+ +  R
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 119/241 (49%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   Y+ LI+ FC  G++    E +  M  NG   NVV+Y+TL++ +CK   +++++  
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           Y +M   G+ P   TY +L     +I  +  A +L +EM    V     TY   IDGLC 
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              + EA ELF  +        + +Y+ LI G  K   ++ A EL   L   G+ P+++ 
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y   I G C+  +++ A  +  +M+  G+  N + + TLM    ++   ++ + LL  M 
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569

Query: 258 E 258
           E
Sbjct: 570 E 570



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 120/246 (48%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   G++PN   YSTL+D FC  G + +A + +V M   G + N  TY +LI+  CK  +
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + ++  L +EML  G+   VVTY  L  GL +  +++ A +LF +M  + V    ++YN 
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G  K   +  A EL   L+    +  +  Y   I GLC + K+E A  +   +   G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           +  N + Y  ++  +   G   +   L  +M+   +    VTF  L+ G  +N   SK V
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597

Query: 251 ELLHRM 256
           +  +R+
Sbjct: 598 DYFNRI 603



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 36/232 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  LL+ +  RG++P+  +Y T I G C   +I+ A+ +   M   G   N + Y T
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY--------------------------- 93
           L++ Y K+ +  E L+L  EM    I  TVVT+                           
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607

Query: 94  ---------NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
                      +  GL + +QVE A  LF++M    +  + + Y + +DG  K G ++EA
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
             L   +  +  +L + AY+ L+ GL    +L+ A    + +   G+ P+ V
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 75/150 (50%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P    ++ LF  L ++  +E A++ F +M+   V  +T + N  +    K G   +    
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           F+ +        +  Y+ +ID +CK G +E A  LF+ +   GL+P+ VTYN MI GF  
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            G++D     F +M+     P+ +T+N L+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALI 339



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 15/174 (8%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET-----STYNTFIDG- 134
           M   G + +V +Y  + H LF       A  +  EM  S    +      ST N  + G 
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192

Query: 135 ---------LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
                    L   G + EA + F  ++  +      + + L+    K+GK +     F+ 
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +   G  P V TYNIMI   C +G ++ A  LF +M+ +G+ P+ VT+N+++ G
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 67/133 (50%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++ NA +++ +IDG C   +++ A  LF  M   G + +   Y +L++G  K  +V E+
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L  +M   G++  ++ Y +L  GL   +Q++ A    +EM    +  +     + +  
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727

Query: 135 LCKNGYIVEAAEL 147
             + G I EA EL
Sbjct: 728 HYELGCIDEAVEL 740


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 129/246 (52%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEE 73
           G+ PN + Y T+I G+C  G +D A ++F  M   G      V YN LI GYC    ++ 
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L     M+ +G+  TV TYN L H LF   +   A +L +EM    +A +  TYN  I+
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 669

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G CK G + +A E+F  +        +  Y+ LI  L K G+++   +LF    R G+ P
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++V YN +I+     G +D+A ++  +ME K +AP+ VT+NTLM G        +  +L+
Sbjct: 730 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789

Query: 254 HRMDER 259
             M ER
Sbjct: 790 DEMTER 795



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 130/255 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L++ M  +G+ P+ F Y+ LI+G C  G + +A E+F +M   G    VVTY  LI
Sbjct: 644 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 703

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               K   V+E+  L+ E + +GIRP +V YN L +       ++ A ++  EM+   +A
Sbjct: 704 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 763

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT + GLC  G + EA +L   +     +  +  Y+ LI G    G ++ A  +
Sbjct: 764 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 823

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P ++TYN +I G C +GQ D A ++  +M   G+ P+  T+ +L+ G   
Sbjct: 824 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 883

Query: 243 NNETSKVVELLHRMD 257
            +E +   E L   D
Sbjct: 884 EDERAIDDERLAAAD 898



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEID---------------------- 37
           +DEA ++ D M+ +G V+P A +Y+ LI G+C  G++D                      
Sbjct: 571 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 630

Query: 38  -------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
                         A EL   M   G   +V TYN LING+CK  +V+++L ++  M  +
Sbjct: 631 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 690

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+R TVVTY  L + L +  QV+   KLFDE     +  +   YN  I+    +G I  A
Sbjct: 691 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 750

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E+   +   +       Y+ L+ GLC +G+++ A +L   +   G+ P++VTYN +I G
Sbjct: 751 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 810

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +   G +  A  +  +M  KG  P  +T+N L+ G  +N +      ++  M E
Sbjct: 811 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 864



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 8/241 (3%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
            ++ ++   C  G+  RA EL   M       N VTYNT+I G+C    V+ +L++  EM
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 545

Query: 82  LSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNG 139
             + GI P   TY T+  G  ++ +V+ A+K+FDEM    +V  E   YN  I G C  G
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605

Query: 140 YIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
            + + A L+R   V +   + +  Y+ L+  L   G+   A+EL + +   GL P+V TY
Sbjct: 606 KL-DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           NI+I+G C +G + KA ++F +M  +GV    VT+  L+    +  +  +  +L      
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 259 R 259
           R
Sbjct: 725 R 725



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 82/135 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++  M ++ + P+   Y+TL+ G CL G +D AR+L   M   G   ++VTYNT
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY    DV+++L + +EM++KG  PT++TYN L  GL +  Q + A  +  EM  + 
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866

Query: 121 VAAETSTYNTFIDGL 135
           +  + STY + I+GL
Sbjct: 867 ITPDDSTYISLIEGL 881



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+      +    SL LYS M S  +  +  +     H L        A  LF +M  
Sbjct: 426 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS----LHPLLSALPSAPAFALFADMFR 481

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +   T+T+N  +  LC  G    A EL R +           Y+ +I G C  G+++ 
Sbjct: 482 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQA 537

Query: 179 AWELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTL 236
           A ++ + +  R G+ PN  TY  +I G+C  G++D+A  +F +M  KG V P  V +N L
Sbjct: 538 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 597

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G     +    +    RM ER
Sbjct: 598 IGGYCDQGKLDTALLYRDRMVER 620


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  154 bits (388), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 126/238 (52%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           + Y+ LI G C  G ID A  +F  M    C   V TY  L++G CK + V E+  L  E
Sbjct: 162 YSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGE 221

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M++KG+ P VVTYN L  GL +  + +   KL ++M+    + +  TY   + GLCK+G 
Sbjct: 222 MVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGK 281

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           +   A++          L +  Y+ LI+G CK G ++ A ++ Q + R  + P V T+N 
Sbjct: 282 VGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNE 341

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +IHGFC  G++ KA      M   G++PN VTFN+L+ G     E    + LL  M+E
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEE 399



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 133/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
            +++L   I +GV      Y+ LI+G+C  G++  A ++   M  N     V T+N +I+
Sbjct: 285 GAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIH 344

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C    V +++   ++M   G+ P  VT+N+L  G   + + + AL+L D M+   V  
Sbjct: 345 GFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLP 404

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY  FID LC  G + EA  LF  L +   +     Y+ L+ G C++G +++A+ L 
Sbjct: 405 DRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLM 464

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +     MP+V TYN +I G C   ++D+A DL   M+ +G+ P   TFN L+   + +
Sbjct: 465 EKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWD 524

Query: 244 NETSKVVELLHRM 256
            + +   ++  +M
Sbjct: 525 KKHADAAKMYEQM 537



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 136/297 (45%), Gaps = 43/297 (14%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING------------ 50
           EA  LL  M+ +GV PN   Y+ LI G C  G  D   +L   M+I              
Sbjct: 214 EAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVV 273

Query: 51  ---CMHN--------------------VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
              C H                     V+TYN LINGYCK  D++ +L++   M    + 
Sbjct: 274 HGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVN 333

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P V T+N + HG     +V  A+    +M  + ++  T T+N+ I G C  G   E    
Sbjct: 334 PGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVG---ERKIA 390

Query: 148 FRTLRVLKCELGI----EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
            R L +++ E G+    + Y+  ID LC  G+LE A  LF  LP  G+  + V Y  ++H
Sbjct: 391 LRLLDLME-EYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVH 449

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G+C  G +D A  L   M ++   P+  T+NTL+ G  +     + ++LL +M ++ 
Sbjct: 450 GYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG 506



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A R+   M +   RP    Y+ L+DG C    +  A  L   M   G + NVVTYN 
Sbjct: 177 IDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNA 236

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+    ++   L  +M  +   P   TY  + HGL +  +V H  K+  E     
Sbjct: 237 LIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKG 296

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA E  TYN  I+G CK G +  A ++ + ++  +   G++ ++ +I G C  GK+  A 
Sbjct: 297 VALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAM 356

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHG-----------------------------------F 205
                +   GL PN VT+N +I G                                    
Sbjct: 357 AFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDAL 416

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C++GQ+++AH LF  +  KG+  + V + +L+ G  +  +      L+ +M   N
Sbjct: 417 CDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASEN 471



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 1/247 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYNTLINGYCKTK 69
           M + G+ P+ F Y+ L+ G C  G +  A  LFV M    G  ++  +Y  LI G C   
Sbjct: 116 MREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAG 175

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            ++++  ++++M     RP V TY  L  GL ++ +V  A  L  EM +  V     TYN
Sbjct: 176 RIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYN 235

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I GLC+ G   +  +L   + + +       Y+ ++ GLCK GK+    ++       
Sbjct: 236 ALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK 295

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+   V+TYN +I+G+C  G M  A D+   M+   V P   TFN ++ G     +  K 
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355

Query: 250 VELLHRM 256
           +  L +M
Sbjct: 356 MAFLTQM 362



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 2/236 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RLLDLM + GV P+   Y+  ID  C  G+++ A  LF  + + G   + V Y +L++
Sbjct: 390 ALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVH 449

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+  D++ +  L  +M S+   P V TYNTL  GL ++ +++ A+ L D+M+   +  
Sbjct: 450 GYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEP 509

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI--DGLCKIGKLETAWE 181
            T T+N  I  +  +    +AA+++  +    C+   + Y+  I  D      K E    
Sbjct: 510 TTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDM 569

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               +   G+ P+V TYN +I  + + G  +KA    + M +  + P+C T++ L+
Sbjct: 570 AVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILL 625



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 1/213 (0%)

Query: 43  FVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           F +M  +G   N  TYNTLIN +CK   + ++      M   G+ P   TYN L  GL  
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 103 IHQVEHALKLFDEMQHSDVAA-ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
              +  A  LF +M     A  +  +Y   I GLC  G I +A  +F  +    C  G+ 
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            Y+ L+DGLCK+ ++  A  L   +   G++PNVVTYN +I G C +G+ D    L   M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           E +  +P+C T+  ++ G  ++ +     ++LH
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLH 290



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 1/184 (0%)

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L  +  ML  G  P   TYNTL +   ++  +  A      M+ + +A +T TYN  + G
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 135 LCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           LC+ G +  A  LF  + R         +Y+ LI GLC  G+++ A  +F  + R    P
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            V TY +++ G C   ++ +A  L  +M  KGV PN VT+N L+ G  +      V +LL
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254

Query: 254 HRMD 257
            +M+
Sbjct: 255 EKME 258



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 24/278 (8%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLI-----DGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           +A+++ + MI  G +P+   Y+  I     +G      ID A    V M   G   +V T
Sbjct: 529 DAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAGVFPDVET 585

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH--------------GLFEI 103
           YN +I  Y      E++   + +MLS  I P   TY+ L +               ++++
Sbjct: 586 YNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKM 645

Query: 104 HQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
             V +  +LF++M  SD A   STY   + GLC    + E   L   ++     L  +  
Sbjct: 646 VDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMS 705

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
             L+   C +     A E F+S+      P + +  +++ G C+ G    A  +F DM  
Sbjct: 706 DYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLG 765

Query: 224 KGVAPNCVTFNTLMLGCI-RNNETSKVVELLHRMDERN 260
            G   + V +  L++ C+         +E+L  MD + 
Sbjct: 766 LGYNYDEVVWK-LLIDCLHEKGHAGACLEMLSVMDAKK 802



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/241 (21%), Positives = 95/241 (39%), Gaps = 14/241 (5%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC---- 66
           M + GV P+   Y+ +I  +   G  ++A    V M       +  TY+ L+N  C    
Sbjct: 574 MHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDD 633

Query: 67  ----------KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
                     K  DV     L+ +M      P + TY  L  GL    ++E    L  +M
Sbjct: 634 SDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKM 693

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           Q + +  +    +  +   C      EA E FR++     + G+++   L+ GLC  G  
Sbjct: 694 QGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDH 753

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  +F  +  +G   + V + ++I      G      ++   M+AK    +  T+ +L
Sbjct: 754 GMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASL 813

Query: 237 M 237
           +
Sbjct: 814 V 814



 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 31/161 (19%), Positives = 60/161 (37%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M +    P    Y  L+ G C    ++    L + M  N  + +    + L+  YC
Sbjct: 654 LFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYC 713

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             +   E+   +  M  +  +P + +   L  GL +      A+ +F +M       +  
Sbjct: 714 NLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEV 773

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            +   ID L + G+     E+   +   KC      Y+ L+
Sbjct: 774 VWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 36/77 (46%)

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F ++ + G  PN  TYN +I+  C    +  A    + M   G+AP+  T+N LMLG  R
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 243 NNETSKVVELLHRMDER 259
               +    L  +M  R
Sbjct: 138 AGLLAAACGLFVQMPRR 154


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 146/259 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L+D M  +G++P  F Y+ +I+G C TG+  RA+ +   M   G   +  TYN 
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  ++ ++  ++ EM S+G+ P +V+++ L   L +   ++ ALK F +M+++ 
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +   Y   I G C+NG + EA ++   +    C L +  Y+ +++GLCK   L  A 
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +   G+ P+  T+  +I+G+  DG M+KA  LF  M  + + P+ VT+NTL+ G 
Sbjct: 328 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 387

Query: 241 IRNNETSKVVELLHRMDER 259
            + +E  KV EL + M  R
Sbjct: 388 CKGSEMEKVNELWNDMISR 406



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M +RGV P+ + ++TLI+G+   G +++A  LF  M       +VVTYNT
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  ++E+   L+++M+S+ I P  ++Y  L +G   +  V  A +L+DEM    
Sbjct: 383 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A   T NT + G C+ G  V+A E    + +         Y+ LI+G  K   ++ A+
Sbjct: 443 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 502

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL+P+V+TYN++++GF   G+M +A  + L M  +GV P+  T+ +L+ G 
Sbjct: 503 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGH 562

Query: 241 IRNNETSKVVELLHRMDER 259
           +  N   +   +   M +R
Sbjct: 563 VTQNNLKEAFRVHDEMLQR 581



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   +++ GV+ N +  + +I+  C   +I+  +     M+  G   +VVTYNT
Sbjct: 78  VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 137

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC+   +EE+  L   M  KG++P V TYN + +GL +  +   A  + DEM    
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +T+TYN  +   C+N  +++A  +F  +        + ++S LI  L K G L+ A 
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F+ +   GL P+ V Y I+I GFC +G M +A  +  +M  +G   + VT+NT++ G 
Sbjct: 258 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 317

Query: 241 IRNNETSKVVELLHRMDER 259
            +    S+  EL   M ER
Sbjct: 318 CKEKMLSEADELFTEMTER 336



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++     L  M ++GV P+   Y+TLI+ +C  G ++ A EL  SM   G    V TYN 
Sbjct: 113 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 172

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CKT     +  +  EML  G+ P   TYN L         +  A ++FDEM    
Sbjct: 173 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 232

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +++  I  L KNG + +A + FR ++          Y+ LI G C+ G +  A 
Sbjct: 233 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 292

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G + +VVTYN +++G C +  + +A +LF +M  +GV P+  TF TL+ G 
Sbjct: 293 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 352

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++   +K V L   M +RN
Sbjct: 353 SKDGNMNKAVTLFEMMIQRN 372



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 132/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A R+ D M  +GV P+   +S LI      G +D+A + F  M   G   + V Y  
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 277

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   + E+L +  EML +G    VVTYNT+ +GL +   +  A +LF EM    
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+ T I+G  K+G + +A  LF  +     +  +  Y+ LIDG CK  ++E   
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +    + PN ++Y I+I+G+CN G + +A  L+ +M  KG     +T NT++ G 
Sbjct: 398 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 457

Query: 241 IRNNETSKVVELLHRM 256
            R     K  E L  M
Sbjct: 458 CRAGNAVKADEFLSNM 473



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA ++ D M+++G   +   Y+T+++G C    +  A ELF  M   G   +  T+ T
Sbjct: 288 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 347

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGY K  ++ +++ L+  M+ + ++P VVTYNTL  G  +  ++E   +L+++M    
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 407

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +Y   I+G C  G + EA  L+  +     E  I   + ++ G C+ G    A 
Sbjct: 408 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 467

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E   ++   G++P+ +TYN +I+GF  +  MD+A  L   ME  G+ P+ +T+N ++ G 
Sbjct: 468 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 527

Query: 241 IRNNETSKVVELLHRMDER 259
            R     +   ++ +M ER
Sbjct: 528 SRQGRMQEAELIMLKMIER 546



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 121/236 (51%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           ++L+ G    G +D A E++  +  +G   NV T N +IN  CK + +E + +  S+M  
Sbjct: 66  NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           KG+ P VVTYNTL +       +E A +L D M    +     TYN  I+GLCK G  + 
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 185

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A  +   +  +        Y+ L+   C+   +  A  +F  +P  G++P++V+++ +I 
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 245

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
               +G +D+A   F DM+  G+AP+ V +  L+ G  RN   S+ +++   M E+
Sbjct: 246 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 301



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 111/219 (50%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  V+  L+  +    ++    E F  +   G   ++   N+L+ G  K   V+ +  +Y
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E++  G++  V T N + + L +  ++E+      +M+   V  +  TYNT I+  C+ 
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA EL  ++     +  +  Y+ +I+GLCK GK   A  +   + ++G+ P+  TY
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           NI++   C +  M  A  +F +M ++GV P+ V+F+ L+
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 98/194 (50%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  N + ++ L+  Y + + + E    +  + SKG+  ++   N+L  GL ++  V+ A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +++ E+  S V     T N  I+ LCKN  I         +        +  Y+ LI+  
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C+ G LE A+EL  S+   GL P V TYN +I+G C  G+  +A  +  +M   G++P+ 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 231 VTFNTLMLGCIRNN 244
            T+N L++ C RN+
Sbjct: 203 ATYNILLVECCRND 216



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 64/117 (54%)

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           E  E FR L+     + I A + L+ GL K+G ++ AWE++Q + R G+  NV T NIMI
Sbjct: 45  EGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMI 104

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +  C + +++       DME KGV P+ VT+NTL+    R     +  EL+  M  +
Sbjct: 105 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 161



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P V  ++ L     +  ++    + F  ++   +    +  N+ + GL K G++  A
Sbjct: 24  GSNPLV--FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E+++ +     ++ +   + +I+ LCK  K+E        +   G+ P+VVTYN +I+ 
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +C  G +++A +L   M  KG+ P   T+N ++ G  +  +  +   +L  M
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 193



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  L++ M   G+ P+   Y+ +++GF   G +  A  + + M   G   +  TY +
Sbjct: 498 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRP 88
           LING+    +++E+  ++ EML +G  P
Sbjct: 558 LINGHVTQNNLKEAFRVHDEMLQRGFVP 585


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 132/248 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA +L   M +RG +P+ F ++TL+  +C  G+++    L   M   G   ++V+Y T
Sbjct: 518 MEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGT 577

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+CK KD+ ++    +E++ +G++P V  YN L  G      +  A+   + M+ + 
Sbjct: 578 IIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG 637

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + +  +C  G + EA  +F   R    +LG+  Y+ +I G CK+GK+  A 
Sbjct: 638 IQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAV 697

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +   G+ PN +TY  +++ +   G  ++A  LF +M   GV P+ +T+ TL+  C
Sbjct: 698 AYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARC 757

Query: 241 IRNNETSK 248
              N   K
Sbjct: 758 SEVNSLDK 765



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 135/260 (51%), Gaps = 1/260 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A RL D M+ + ++P A  Y+ +    C  GE++RA  +   M   G   +   +NT+
Sbjct: 343 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 402

Query: 62  INGYC-KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +     +T+ +E  +++ +EM+++G+RP           L +  + + A+ ++ +  +  
Sbjct: 403 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 462

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +T N  I GLC+  Y+ EA ++ +T+     EL    Y+ +I G CK  K+E A 
Sbjct: 463 LGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI 522

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   + R G  P++ T+N ++H +CN G+M++   L   M+ +G+ P+ V++ T++ G 
Sbjct: 523 KLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGH 582

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  +  K  E L  + +R 
Sbjct: 583 CKAKDIRKAKEYLTELMDRG 602



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 111/227 (48%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG+RPN  + +  +   C  G+   A  ++      G   N+ T N LI+G C+ K 
Sbjct: 423 MVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKY 482

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E+  +   ML+KGI    +TYN +  G  +  ++E A+KL  +M       +  T+NT
Sbjct: 483 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNT 542

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            +   C  G + E   L   ++    +  I +Y  +IDG CK   +  A E    L   G
Sbjct: 543 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRG 602

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L PNV  YN +I G+  +G +  A D    M++ G+ P  VT+ +LM
Sbjct: 603 LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 649



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 35/280 (12%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           + +G+  N    + LI G C    +  A ++  +M   G   + +TYN +I G CK   +
Sbjct: 459 LNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 518

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           EE++ L+ +M  +G +P + T+NTL H    + ++E    L D+M+   +  +  +Y T 
Sbjct: 519 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTI 578

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDG CK   I +A E    L     +  +  Y+ LI G  + G +  A +  +++   G+
Sbjct: 579 IDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 638

Query: 192 MP-----------------------------------NVVTYNIMIHGFCNDGQMDKAHD 216
            P                                    V+ Y IMI G+C  G+M +A  
Sbjct: 639 QPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVA 698

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            F +M ++G++PN +T+ TLM    ++  + +  +L   M
Sbjct: 699 YFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEM 738



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 2/259 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLI 62
           A+    ++  RG  P+    +  ++     G++D ARE+F  M +      N  +Y  +I
Sbjct: 169 AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK   V+    + +E+   G++PTVVTYN L   L +  +VE A +L   M+   + 
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+   I+GL +     E   + + +  L        Y+ LI   C+ G    A  L
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI- 241
           F  +    + P  VTYN++    C +G+M++A  +  DM + G+  +C  FNT++   + 
Sbjct: 349 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ 408

Query: 242 RNNETSKVVELLHRMDERN 260
           R      VV + + M  R 
Sbjct: 409 RTRRLESVVSITNEMVTRG 427



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 40/275 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RL   M Q G+ P+   +  LI+G            +   M+  G   N V YN 
Sbjct: 272 VEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNE 331

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C+     ++L L+ EM+ K ++PT VTYN +   L +  ++E A ++ ++M    
Sbjct: 332 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIG 391

Query: 121 VAAETSTYNTFIDG------------------------------------LCKNGYIVEA 144
           +      +NT +                                      LCK G   EA
Sbjct: 392 MTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEA 451

Query: 145 AELFRTLRVLKCELGI--EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
             ++   + L   LG+     + LI GLC+   ++ A ++ Q++   G+  + +TYNIMI
Sbjct: 452 VGIW--FKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMI 509

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            G C D +M++A  L  DM  +G  P+  TFNTL+
Sbjct: 510 RGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLL 544



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 38/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    +L  + + G++P    Y+ L+D  C +G ++ A  L   M+  G   +VVT+  
Sbjct: 237 VDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGI 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  + +   E   +  EM   G+ P  V YN L            AL+LFDEM    
Sbjct: 297 LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKK 356

Query: 121 VAAETSTYNTFIDGLCKNGYIVEA-----------------------AELFRTLRVLKCE 157
           +     TYN     LCK G +  A                       A L +  R L+  
Sbjct: 357 MKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESV 416

Query: 158 LGIE--------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           + I                 +C+ + LCK GK + A  ++      GL  N+ T N +IH
Sbjct: 417 VSITNEMVTRGMRPNDPLMTACMRE-LCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIH 475

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G C    M +A  +   M  KG+  + +T+N ++ GC ++++  + ++L   M  R 
Sbjct: 476 GLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 532



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +     +  V      Y+ +I G+C  G++  A   F  M   G   N +TY T
Sbjct: 658 VEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTT 717

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  Y K+ + EE+  L+ EM+  G+ P  +TY TL     E++ ++  +    E+    
Sbjct: 718 LMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGA 777

Query: 121 VAAETSTYNTFIDGL 135
           +  +   YN   +G+
Sbjct: 778 LTKDDRMYNILSNGI 792



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 43/210 (20%)

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY--NTFIDGLCKNGYIVEA 144
           R  + T   L   L  +H     L+   E      +  +S +  +TFI    + G +  A
Sbjct: 115 RTAIRTARRLLSRLLHVH----PLRTAAEAVADAASTPSSDFLIHTFITSPAQ-GSLCRA 169

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF--------------------- 183
           A+ FR L        I+  +  ++ L + G+L+ A E+F                     
Sbjct: 170 ADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIK 229

Query: 184 ---------------QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
                            L R GL P VVTYN+++   C  G++++A  L   ME  G+ P
Sbjct: 230 ALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTP 289

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + VTF  L+ G  R     +V  +L  M++
Sbjct: 290 SVVTFGILINGLARGERFGEVGIVLQEMEQ 319


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 138/255 (54%), Gaps = 1/255 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA +L   M +RG +P+ F ++TL+  +C  G+++    L   M   G   ++V+Y T
Sbjct: 290 MEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGT 349

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+CK KD+ ++    +E++ +G++P V  YN L  G      +  A+   + M+ + 
Sbjct: 350 IIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG 409

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + +  +C  G + EA  +F   R    +LG+  Y+ +I G CK+GK+  A 
Sbjct: 410 IQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAV 469

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +   G+ PN +TY  +++ +   G  ++A  LF +M   GV P+ +T+ TL+  C
Sbjct: 470 AYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARC 529

Query: 241 I-RNNETSKVVELLH 254
             +  +T++  + LH
Sbjct: 530 SEKGGKTTQYGQELH 544



 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 52/298 (17%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGE-----------------IDRARELFVSMDINGCMH 53
           M+ RG+RPN  + +  +   C  G+                 +  A ++  +M   G   
Sbjct: 213 MVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIEL 272

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           + +TYN +I G CK   +EE++ L+ +M  +G +P + T+NTL H    + ++E    L 
Sbjct: 273 DSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLL 332

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           D+M+   +  +  +Y T IDG CK   I +A E    L     +  +  Y+ LI G  + 
Sbjct: 333 DQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRN 392

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYN---------------------------------- 199
           G +  A +  +++   G+ P  VTY                                   
Sbjct: 393 GDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGY 452

Query: 200 -IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            IMI G+C  G+M +A   F +M ++G++PN +T+ TLM    ++  + +  +L   M
Sbjct: 453 TIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEM 510



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 53/312 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RL   M Q G+ P+   +  LI+G            +   M+  G   N V YN 
Sbjct: 62  VEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNE 121

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C+     ++L L+ EM+ K ++PT VTYN +   L +  ++E A ++ ++M    
Sbjct: 122 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIG 181

Query: 121 VAAETSTYNTFIDG------------------------------------LCKNG----- 139
           +      +NT +                                      LCK G     
Sbjct: 182 MTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEA 241

Query: 140 ------------YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
                       Y+ EA ++ +T+     EL    Y+ +I G CK  K+E A +L   + 
Sbjct: 242 VGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMT 301

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           R G  P++ T+N ++H +CN G+M++   L   M+ +G+ P+ V++ T++ G  +  +  
Sbjct: 302 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 361

Query: 248 KVVELLHRMDER 259
           K  E L  + +R
Sbjct: 362 KAKEYLTELMDR 373



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 121/291 (41%), Gaps = 55/291 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    +L  + + G++P    Y+ L+D  C +G ++ A  L   M+  G   +VVT+  
Sbjct: 27  VDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGI 86

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  + +   E   +  EM   G+ P  V YN L            AL+LFDEM    
Sbjct: 87  LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKK 146

Query: 121 VAAETSTYNTFIDGLCKNGYIVEA-----------------------AELFRTLRVLKCE 157
           +     TYN     LCK G +  A                       A L +  R L+  
Sbjct: 147 MKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESV 206

Query: 158 LGIE--------------AYSCLIDGLCKIGKLETA---W--------------ELFQSL 186
           + I                 +C+ + LCK GK + A   W              ++ Q++
Sbjct: 207 VSITNEMVTRGMRPNDPLMTACMRE-LCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTM 265

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              G+  + +TYNIMI G C D +M++A  L  DM  +G  P+  TFNTL+
Sbjct: 266 LNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLL 316



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 5/230 (2%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           R V  N + Y+ +I   C  G++D   E+   +   G    VVTYN L++  CK+  VEE
Sbjct: 5   RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +  L   M   G+ P+VVT+  L +GL    +      +  EM+   V+     YN  I 
Sbjct: 65  AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG 124

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
             C+ G+  +A  LF  + + K +     Y+ +   LCK G++E A  + + +  +G+  
Sbjct: 125 WHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTV 184

Query: 194 NVVTYNIMIHGFCNDG-QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +   +N ++        +++    +  +M  +G+ PN    + LM  C+R
Sbjct: 185 HCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPN----DPLMTACMR 230



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 1/207 (0%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N  +Y  +I   CK   V+    + +E+   G++PTVVTYN L   L +  +VE A +L 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M+   +     T+   I+GL +     E   + + +  L        Y+ LI   C+ 
Sbjct: 70  GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 129

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G    A  LF  +    + P  VTYN++    C +G+M++A  +  DM + G+  +C  F
Sbjct: 130 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 189

Query: 234 NTLMLGCI-RNNETSKVVELLHRMDER 259
           NT++   + R      VV + + M  R
Sbjct: 190 NTVVAWLLQRTRRLESVVSITNEMVTR 216



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%)

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +  +VA    +Y   I  LCK G +    E+   L     +  +  Y+ L+D LCK G++
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A+ L   + + G+ P+VVT+ I+I+G     +  +   +  +ME  GV+PN V +N L
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 237 MLGCIRNNETSKVVELLHRM 256
           +    R    S+ + L   M
Sbjct: 123 IGWHCRKGHCSQALRLFDEM 142


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 128/237 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E S +   M Q+G   +A  Y+ ++DGFC +G++ +A E+   M        V TY  ++
Sbjct: 447 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 506

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  SKGI   VV Y++L  G  ++ +++ A  + +EM    + 
Sbjct: 507 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 566

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N+ +D L K   I EA   F++++ +KC      YS LI+GLC++ K   A+  
Sbjct: 567 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVF 626

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +Q + + GL+PNVVTY  MI G    G +  A+ LF   +A G  P+  +FN L+ G
Sbjct: 627 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 683



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RL + M+  G   N  VY++LI  F + G  +   ++F  +   GC  ++   NT
Sbjct: 340 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNT 399

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  +VE+   ++ ++ S G  P V +Y+ L HGL +  Q      +F  M+   
Sbjct: 400 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 459

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   YN  +DG CK+G + +A E+   ++    +  +  Y  ++DGL KI +L+ A+
Sbjct: 460 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 519

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G+  NVV Y+ +I GF   G++D+A+ +  +M  KG+ PN  T+N+L+   
Sbjct: 520 MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 579

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  E ++ +     M E
Sbjct: 580 VKAEEINEALVCFQSMKE 597



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 124/239 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++ +   QRG  P+   Y +LIDG    G++D A  LF  M   G   N V Y +
Sbjct: 305 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +      E+   ++ E++ +G +P +   NT    +F+  +VE    +F++++   
Sbjct: 365 LIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 424

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y+  I GL K G   E + +F  ++     L   AY+ ++DG CK GK+  A+
Sbjct: 425 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 484

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+ + +    + P V TY  ++ G     ++D+A+ LF + ++KG+  N V +++L+ G
Sbjct: 485 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 543



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L ++M ++   PN+  Y+ +ID  CL G ++ A  +   M+      N++T N 
Sbjct: 236 VDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 294

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + +EE+  ++     +G  P  VTY +L  GL +  QV+ A +LF++M  + 
Sbjct: 295 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A    Y + I     +G   +  ++F+ L    C+  +   +  +D + K G++E   
Sbjct: 355 HNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 414

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G +P+V +Y+I+IHG    GQ  +  ++F  M+ +G A +   +N ++ G 
Sbjct: 415 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 474

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ +  K  E+L  M E+
Sbjct: 475 CKSGKVHKAYEILEEMKEK 493



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 35/289 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++  ++   +I+RG +P+  + +T +D     GE+++ R +F  +   G + +V +Y+ L
Sbjct: 376 EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     E+ N++  M  +G       YN +  G  +  +V  A ++ +EM+   V
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 495

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY   +DGL K   + EA  LF   +    EL +  YS LIDG  K+G+++ A+ 
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 555

Query: 182 LFQSLPRVGLMPNVVTYN-----------------------------------IMIHGFC 206
           + + + + GL PNV T+N                                   I+I+G C
Sbjct: 556 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 615

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
              + +KA   + DM+ +G+ PN VT+ T++ G  +    +    L  R
Sbjct: 616 RVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 664



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 119/239 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+LD M    + PN    + ++D  C   +++ A ++F S    GC  + VTY +
Sbjct: 270 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 329

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K   V+E+  L+ +ML  G     V Y +L    F   + E   K+F E+    
Sbjct: 330 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRG 389

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +  NT++D + K G + +   +F  +R       + +YS LI GL K G+     
Sbjct: 390 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 449

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +F ++ + G   +   YN ++ GFC  G++ KA+++  +M+ K V P   T+  ++ G
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 508



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   + +M +   RP    Y+ LI         +RA EL   M   G    V  + T
Sbjct: 26  LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTT 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+    +   V ++L L  E+    + P +V YN       +   V+ A K F E++   
Sbjct: 86  LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQG 145

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y + I  LCK G + EA ELF  +   +      AY+ +I G    G+ E A+
Sbjct: 146 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 205

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +L + L   G +P+VV++N ++       ++D+A  LF  M+ K   PN  T+N ++
Sbjct: 206 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIII 261



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 86/181 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L +    +G+  N  +YS+LIDGF   G ID A  +   M   G   NV T+N+
Sbjct: 515 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 574

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K +++ E+L  +  M      P   TY+ L +GL  + +   A   + +MQ   
Sbjct: 575 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 634

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T I GL K G I +A  LF   +         +++ LI+G+    +   A+
Sbjct: 635 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 694

Query: 181 E 181
           +
Sbjct: 695 Q 695



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 78/173 (45%)

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           RP    Y  L   L E  + E AL+L  +MQ          + T +  L + G + +A  
Sbjct: 42  RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 101

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L   ++    E  I  Y+  ID   K G ++ A + F  L   GL P+ V+Y  MI   C
Sbjct: 102 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLC 161

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             G++ +A +LF  MEA+   P    +NT+++G           +LL R+ ER
Sbjct: 162 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 214


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 128/237 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E S +   M Q+G   +A  Y+ ++DGFC +G++ +A E+   M        V TY  ++
Sbjct: 315 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 374

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  SKGI   VV Y++L  G  ++ +++ A  + +EM    + 
Sbjct: 375 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 434

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N+ +D L K   I EA   F++++ +KC      YS LI+GLC++ K   A+  
Sbjct: 435 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVF 494

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +Q + + GL+PNVVTY  MI G    G +  A+ LF   +A G  P+  +FN L+ G
Sbjct: 495 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 551



 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RL + M+  G   N  VY++LI  F + G  +   ++F  +   GC  ++   NT
Sbjct: 208 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 267

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  +VE+   ++ ++ S G  P V +Y+ L HGL +  Q      +F  M+   
Sbjct: 268 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 327

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   YN  +DG CK+G + +A E+   ++    +  +  Y  ++DGL KI +L+ A+
Sbjct: 328 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 387

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G+  NVV Y+ +I GF   G++D+A+ +  +M  KG+ PN  T+N+L+   
Sbjct: 388 MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 447

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  E ++ +     M E
Sbjct: 448 VKAEEINEALVCFQSMKE 465



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 124/239 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++ +   QRG  P+   Y +LIDG    G++D A  LF  M   G   N V Y +
Sbjct: 173 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +      E+   ++ E++ +G +P +   NT    +F+  +VE    +F++++   
Sbjct: 233 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 292

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y+  I GL K G   E + +F  ++     L   AY+ ++DG CK GK+  A+
Sbjct: 293 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 352

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+ + +    + P V TY  ++ G     ++D+A+ LF + ++KG+  N V +++L+ G
Sbjct: 353 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 411



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L ++M ++   PN+  Y+ +ID  CL G ++ A  +   M+      N++T N 
Sbjct: 104 VDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 162

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + +EE+  ++     +G  P  VTY +L  GL +  QV+ A +LF++M  + 
Sbjct: 163 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 222

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A    Y + I     +G   +  ++F+ L    C+  +   +  +D + K G++E   
Sbjct: 223 HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 282

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G +P+V +Y+I+IHG    GQ  +  ++F  M+ +G A +   +N ++ G 
Sbjct: 283 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 342

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ +  K  E+L  M E+
Sbjct: 343 CKSGKVHKAYEILEEMKEK 361



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 35/289 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++  ++   +I+RG +P+  + +T +D     GE+++ R +F  +   G + +V +Y+ L
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     E+ N++  M  +G       YN +  G  +  +V  A ++ +EM+   V
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY   +DGL K   + EA  LF   +    EL +  YS LIDG  K+G+++ A+ 
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 423

Query: 182 LFQSLPRVGLMPNVVTYN-----------------------------------IMIHGFC 206
           + + + + GL PNV T+N                                   I+I+G C
Sbjct: 424 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 483

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
              + +KA   + DM+ +G+ PN VT+ T++ G  +    +    L  R
Sbjct: 484 RVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 532



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 5/240 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +    +  +G++P+   Y+++I   C  G +  A ELF  M+    +     YNT+I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY      E++  L   +  +G  P+VV++N++   L +  +V+ AL LF+ M+  D   
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 120

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            +STYN  ID LC  G + EA  +   +        +   + ++D LCK  KLE A+++F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +S  + G  P+ VTY  +I G    GQ+D+A+ LF  M   G   N V + +L    IRN
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL----IRN 236



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 1/248 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M      P A+ Y+T+I G+   G  + A +L   +   GC+ +VV++N+
Sbjct: 34  LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 93

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++    K + V+E+L+L+ E++ K   P   TYN +   L    +VE A ++ DEM+H+ 
Sbjct: 94  ILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS 152

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T N  +D LCK   + EA ++F +     C      Y  LIDGL K G+++ A+
Sbjct: 153 LFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAY 212

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G   N V Y  +I  F   G+ +  H +F ++  +G  P+    NT M   
Sbjct: 213 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCV 272

Query: 241 IRNNETSK 248
            +  E  K
Sbjct: 273 FKAGEVEK 280



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 120/242 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+LD M    + PN    + ++D  C   +++ A ++F S    GC  + VTY +
Sbjct: 138 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 197

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K   V+E+  L+ +ML  G     V Y +L    F   + E   K+F E+    
Sbjct: 198 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 257

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +  NT++D + K G + +   +F  +R       + +YS LI GL K G+     
Sbjct: 258 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 317

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F ++ + G   +   YN ++ GFC  G++ KA+++  +M+ K V P   T+  ++ G 
Sbjct: 318 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 377

Query: 241 IR 242
            +
Sbjct: 378 AK 379



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 1/218 (0%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A + F  +   G   + V+Y ++I   CK   + E+  L+++M ++   P    YNT+  
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           G     + E A KL + ++         ++N+ +  L K   + EA  LF  ++    E 
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEP 120

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
               Y+ +ID LC  G++E A+ +   +    L PN++T NIM+   C   ++++A+ +F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
                +G  P+CVT+ +L+ G  +  +  +   L  +M
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 218



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 86/181 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L +    +G+  N  +YS+LIDGF   G ID A  +   M   G   NV T+N+
Sbjct: 383 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 442

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K +++ E+L  +  M      P   TY+ L +GL  + +   A   + +MQ   
Sbjct: 443 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 502

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T I GL K G I +A  LF   +         +++ LI+G+    +   A+
Sbjct: 503 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 562

Query: 181 E 181
           +
Sbjct: 563 Q 563



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%)

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           AW+ F  L   GL P+ V+Y  MI   C  G++ +A +LF  MEA+   P    +NT+++
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G           +LL R+ ER
Sbjct: 62  GYGSAGRFEDAYKLLERLRER 82


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 35/291 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  ++  G+ P++F Y+TLI G+C  G +  A  + V+   NG + +  TY +LI
Sbjct: 304 EAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLI 363

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C   +   +L L++E L KGI+P V+ YNTL  GL     +  A +L  EM    + 
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLI 423

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTL--------------------RVLKCELGIE- 161
            E  T+N  ++GLCK G + +A  L + +                      LK E  +E 
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483

Query: 162 --------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                          Y+ L++GLCK  K E   E ++++   G  PN+ T+NI++   C 
Sbjct: 484 LDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             ++DKA  L  +M+ K V P+ VTF TL+ G  +N +      L  +M+E
Sbjct: 544 YHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594



 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+ +MI +G  P+ F ++ LI G+    +++ A E+   M  NG   +V TYN+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 501

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CKT   E+ +  Y  M+ KG  P + T+N L   L   H+++ AL L +EM++  
Sbjct: 502 LLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKS 561

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           V  +  T+ T IDG CKNG +  A  LFR +  V         Y+ +I    +   +  A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMA 621

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LFQ +    L P+  TY +M+ GFC  G +D  +   L+M   G  P+  T   ++  
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINC 681

Query: 240 CIRNNETSKVVELLHRMDER 259
               +   +   ++HRM ++
Sbjct: 682 LCVEDRVYEAAGIIHRMVQK 701



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 120/221 (54%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L +  + +G++PN  +Y+TLI G    G I  A +L   M   G +  V T+N L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNIL 432

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG CK   V ++  L   M+SKG  P + T+N L HG     ++E+AL++ D M  + V
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGV 492

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ ++GLCK     +  E ++T+    C   +  ++ L++ LC+  KL+ A  
Sbjct: 493 DPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALG 552

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           L + +    + P+ VT+  +I GFC +G +D A+ LF  ME
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E  +LLD +I+RGV PN F Y+  I G C  GE+D A  +   +   G   +VVTYN 
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNY 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE------------- 107
           LI G CK    +E+     +++++G+ P   TYNTL  G  +   V+             
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNG 351

Query: 108 ----------------------HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                                  AL LF+E     +      YNT I GL   G I+EAA
Sbjct: 352 FVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAA 411

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L   +        ++ ++ L++GLCK+G +  A  L + +   G  P++ T+NI+IHG+
Sbjct: 412 QLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
               +M+ A ++   M   GV P+  T+N+L+ G  + ++   V+E    M E+
Sbjct: 472 STQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEK 525



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 122/253 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++   M  RG+ P+ + ++  +  FC T     A  L  +M   GC  NVV Y T+
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G+ +    +E   L+ +ML+ G+   + T+N L H L +   V+   KL D++    V
Sbjct: 188 VGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGV 247

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN FI GLC+ G +  A  +   L     +  +  Y+ LI GLCK  K + A  
Sbjct: 248 LPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEV 307

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               L   GL P+  TYN +I G+C  G +  A  + ++    G  P+  T+ +L+ G  
Sbjct: 308 YLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLC 367

Query: 242 RNNETSKVVELLH 254
              ET++ + L +
Sbjct: 368 HEGETNRALALFN 380



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 117/239 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M      P  F Y+ ++     +G  D+A ++++ M   G   +V ++  
Sbjct: 92  VQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +  +C+T     +L L + M S+G    VV Y T+  G +E +  +   +LF +M  S 
Sbjct: 152 RMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASG 211

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+   ST+N  +  LCK G + E  +L   +        +  Y+  I GLC+ G+L+ A 
Sbjct: 212 VSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAV 271

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +   L   G  P+VVTYN +I+G C + +  +A      +  +G+ P+  T+NTL+ G
Sbjct: 272 RMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAG 330



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 102/224 (45%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           VY   +  +   G++  A  +F  MD   C   V +YN +++    +   +++  +Y  M
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM 137

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
             +GI P V ++           +   AL+L + M           Y T + G  +  + 
Sbjct: 138 RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            E  ELF  +      L +  ++ L+  LCK G ++   +L   + + G++PN+ TYN  
Sbjct: 198 DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFF 257

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           I G C  G++D A  +   +  +G  P+ VT+N L+ G  +N++
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSK 301



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 1/245 (0%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV-TYNTLINGYCKTKDV 71
           + G +     Y ++I+   L G+ +   E+ V M  N   H +   Y   +  Y +   V
Sbjct: 33  EDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKV 92

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E++N++  M      PTV +YN +   L +    + A K++  M+   +  +  ++   
Sbjct: 93  QEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           +   C+      A  L   +    CE+ + AY  ++ G  +    +  +ELF  +   G+
Sbjct: 153 MKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGV 212

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
              + T+N ++H  C  G + +   L   +  +GV PN  T+N  + G  +  E    V 
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVR 272

Query: 252 LLHRM 256
           ++ R+
Sbjct: 273 MVGRL 277



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 16/231 (6%)

Query: 38  RARELFVSM-DINGCMHNVVTYNTLING---YCKTKDVEESL-----NLYSEMLSKGIRP 88
           +A E+F SM   +G  H + TY ++I     Y K + +EE L     N+ + ML      
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
            +  Y           +V+ A+ +F+ M   D      +YN  +  L  +GY  +A +++
Sbjct: 82  AMKNYG-------RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVY 134

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +R       + +++  +   C+  +   A  L  ++   G   NVV Y  ++ GF  +
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              D+ ++LF  M A GV+    TFN L+    +  +  +  +LL ++ +R
Sbjct: 195 NFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKR 245



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 2/94 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L   M+ R + P+ + Y  ++DGFC TG +D   +  + M  NG + ++ T   +IN
Sbjct: 621 AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVIN 680

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF 97
             C    V E+  +   M+ KG+ P  V  NT+F
Sbjct: 681 CLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTIF 712


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 138/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++L++++  G+ P   +Y+TLI+G+C   ++  A  +F  M       + +TYN LI
Sbjct: 174 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 233

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK + V ++ +L  EM   G+ P+V T+NTL        Q+E    +  +MQ   + 
Sbjct: 234 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 293

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           ++  ++ + +   CKNG I EA  +   +         + Y+ +ID   + G  E A+ L
Sbjct: 294 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 353

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G+  ++VTYN+++ G C   Q+D+A +L   +  +G+ P+ V++NT++  C  
Sbjct: 354 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 413

Query: 243 NNETSKVVELLHRMDE 258
             +T K +ELL  M++
Sbjct: 414 KGDTDKALELLQEMNK 429



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 125/231 (54%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + + M  R +RP+   Y+ LI+G C    + +A +L + M+ +G   +V T+NTLI+ Y 
Sbjct: 213 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 272

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               +E+   + S+M  KGI+  V+++ ++     +  ++  A+ + D+M + DVA    
Sbjct: 273 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 332

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YN+ ID   ++G   +A  L   ++       I  Y+ L+ GLC+  +++ A EL  +L
Sbjct: 333 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 392

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              GL P+VV+YN +I   CN G  DKA +L  +M   G+ P   T++TL+
Sbjct: 393 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLV 443



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDE   L+D M    + P+ F YS L DG   TGE      LF      G M    T + 
Sbjct: 102 MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSI 161

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   V ++  +   ++  G+ PT V YNTL +G  ++  +  A  +F++M+   
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 221

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+GLCK   + +A +L   +     +  +E ++ LID     G+LE  +
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 281

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   + + G+  +V+++  ++  FC +G++ +A  +  DM  K VAPN   +N+++   
Sbjct: 282 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 341

Query: 241 IRNNETSKVVELLHRM 256
           I + +T +   L+ +M
Sbjct: 342 IESGDTEQAFLLVEKM 357



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 131/243 (53%), Gaps = 4/243 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+AF Y+ +I G   +G+   A ++F  M   G + N +TYNT+I+G+ K  D+E    L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +ML  G +P +VTYN L  GL    +++    L DEM    +  +  TY+   DGL +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            G       LF     LK  + + AY+C  L++GLCK GK+  A ++ + L   GL+P  
Sbjct: 134 TGESRTMLSLF--AESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           V YN +I+G+C    +  A  +F  M+++ + P+ +T+N L+ G  +    +K  +L+  
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 251

Query: 256 MDE 258
           M++
Sbjct: 252 MEK 254



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++ D M+  GV PN   Y+T+IDG    G+++    L   M  +G   N+VTYN L+
Sbjct: 34  DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLL 93

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   ++E+  L  EM S  + P   TY+ LF GL    +    L LF E     V 
Sbjct: 94  SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 153

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T +  ++GLCK+G + +A ++   L           Y+ LI+G C++  L  A+ +
Sbjct: 154 LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 213

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +    + P+ +TYN +I+G C    + KA DL ++ME  GV P+  TFNTL+     
Sbjct: 214 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 273

Query: 243 NNETSKVVELLHRMDER 259
             +  K   +L  M ++
Sbjct: 274 AGQLEKCFTVLSDMQQK 290



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 128/257 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+  M + GV P+   ++TLID +   G++++   +   M   G   +V+++ +++
Sbjct: 244 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 303

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +CK   + E++ +  +M+ K + P    YN++     E    E A  L ++M++S V+
Sbjct: 304 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 363

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN  + GLC++  I EA EL  TLR       + +Y+ +I   C  G  + A EL
Sbjct: 364 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 423

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q + + G+ P + TY+ ++    + G++     L+  M  K V P+   +  ++   +R
Sbjct: 424 LQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 483

Query: 243 NNETSKVVELLHRMDER 259
               SKV  L   M E+
Sbjct: 484 CENDSKVASLKKEMSEK 500



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 128/251 (50%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RL D M+  G +PN   Y+ L+ G C  G +D  R L   M  +    +  TY+ L +G 
Sbjct: 72  RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 131

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            +T +    L+L++E L KG+     T + L +GL +  +V  A ++ + + H+ +   T
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             YNT I+G C+   +  A  +F  ++          Y+ LI+GLCK+  +  A +L   
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 251

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + + G+ P+V T+N +I  +   GQ++K   +  DM+ KG+  + ++F +++    +N +
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311

Query: 246 TSKVVELLHRM 256
             + V +L  M
Sbjct: 312 IPEAVAILDDM 322



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 102/221 (46%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M Q+G++ +   + +++  FC  G+I  A  +   M       N   YN++I+ Y 
Sbjct: 283 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 342

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           ++ D E++  L  +M + G+  ++VTYN L  GL    Q++ A +L   +++  +  +  
Sbjct: 343 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 402

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I   C  G   +A EL + +        +  Y  L+  L   G++     L+Q +
Sbjct: 403 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
               + P+   Y IM+  +       K   L  +M  KG+A
Sbjct: 463 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIA 503


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 131/241 (54%), Gaps = 4/241 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEE 73
           G+ PN + Y T+I G+C  G +D A ++F  M   G      V YN LI GYC    ++ 
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L     M+ +G+  TV TYN L H LF   +   A +L +EM    +A +  TYN  I+
Sbjct: 163 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 222

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G CK G + +A E+F  +        +  Y+ LI  L K G+++   +LF    R G+ P
Sbjct: 223 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 282

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI--RNNETSKVV 250
           ++V YN +I+     G +D+A ++  +ME K +AP+ VT+NTLM G C+  R +E  K++
Sbjct: 283 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342

Query: 251 E 251
           +
Sbjct: 343 D 343



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 128/245 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L++ M  +G+ P+ F Y+ LI+G C  G + +A E+F +M   G    VVTY +LI
Sbjct: 197 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLI 256

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               K   V+E+  L+ E + +GIRP +V YN L +       ++ A ++  EM+   +A
Sbjct: 257 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 316

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT + GLC  G + EA +L   +     +  +  Y+ LI G    G ++ A  +
Sbjct: 317 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRI 376

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P ++TYN +I G C +GQ D A ++  +M   G+ P+  T+ +L+ G   
Sbjct: 377 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 436

Query: 243 NNETS 247
            +E +
Sbjct: 437 EDERA 441



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEID---------------------- 37
           +DEA ++ D M+ +G V+P A +Y+ LI G+C  G++D                      
Sbjct: 124 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 183

Query: 38  -------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
                         A EL   M   G   +V TYN LING+CK  +V+++L ++  M  +
Sbjct: 184 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 243

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+R TVVTY +L + L +  QV+   KLFDE     +  +   YN  I+    +G I  A
Sbjct: 244 GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 303

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E+   +   +       Y+ L+ GLC +G+++ A +L   + + G+ P++VTYN +I G
Sbjct: 304 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 363

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +   G +  A  +  +M  KG  P  +T+N L+ G  +N +      ++  M E
Sbjct: 364 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 417



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 8/234 (3%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           ++ ++   C  G+  RA EL   M       N VTYNT+I G+C    V+ +L++  EM 
Sbjct: 44  FNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 99

Query: 83  SK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGY 140
            + GI P   TY T+  G  ++ +V+ A+K+FDEM    +V  E   YN  I G C  G 
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159

Query: 141 IVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
           + + A L+R   V +   + +  Y+ L+  L   G+   A+EL + +   GL P+V TYN
Sbjct: 160 L-DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           I+I+G C +G + KA ++F +M  +GV    VT+ +L+    +  +  +  +L 
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 272



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 82/135 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++  M ++ + P+   Y+TL+ G CL G +D AR+L   M   G   ++VTYNT
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY    DV+++L + +EM++KG  PT++TYN L  GL +  Q + A  +  EM  + 
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419

Query: 121 VAAETSTYNTFIDGL 135
           +  + STY + I+GL
Sbjct: 420 ITPDDSTYISLIEGL 434



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 6/165 (3%)

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
            H L        A  LF +M    +   T+T+N  +  LC  G    A EL R +     
Sbjct: 13  LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----P 68

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
                 Y+ +I G C  G+++ A ++ + +  R G+ PN  TY  +I G+C  G++D+A 
Sbjct: 69  RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 216 DLFLDMEAKG-VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +F +M  KG V P  V +N L+ G     +    +    RM ER
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 173


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 146/259 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L+D M  +G++P  F Y+ +I+G C TG+  RA+ +   M   G   +  TYN 
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  ++ ++  ++ EM S+G+ P +V+++ L   L +   ++ ALK F +M+++ 
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +   Y   I G C+NG + EA ++   +    C L +  Y+ +++GLCK   L  A 
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +   G+ P+  T+  +I+G+  DG M+KA  LF  M  + + P+ VT+NTL+ G 
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 648

Query: 241 IRNNETSKVVELLHRMDER 259
            + +E  KV EL + M  R
Sbjct: 649 CKGSEMEKVNELWNDMISR 667



 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M +RGV P+ + ++TLI+G+   G +++A  LF  M       +VVTYNT
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  ++E+   L+++M+S+ I P  ++Y  L +G   +  V  A +L+DEM    
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A   T NT + G C+ G  V+A E    + +         Y+ LI+G  K   ++ A+
Sbjct: 704 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 763

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL+P+V+TYN++++GF   G+M +A  + L M  +GV P+  T+ +L+ G 
Sbjct: 764 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGH 823

Query: 241 IRNNETSKVVELLHRMDER 259
           +  N   +   +   M +R
Sbjct: 824 VTQNNLKEAFRVHDEMLQR 842



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   +++ GV+ N +  + +I+  C   +I+  +     M+  G   +VVTYNT
Sbjct: 339 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 398

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC+   +EE+  L   M  KG++P V TYN + +GL +  +   A  + DEM    
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +T+TYN  +   C+N  +++A  +F  +        + ++S LI  L K G L+ A 
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F+ +   GL P+ V Y I+I GFC +G M +A  +  +M  +G   + VT+NT++ G 
Sbjct: 519 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578

Query: 241 IRNNETSKVVELLHRMDER 259
            +    S+  EL   M ER
Sbjct: 579 CKEKMLSEADELFTEMTER 597



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 131/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++     L  M ++GV P+   Y+TLI+ +C  G ++ A EL  SM   G    V TYN 
Sbjct: 374 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CKT     +  +  EML  G+ P   TYN L         +  A ++FDEM    
Sbjct: 434 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 493

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +++  I  L KNG + +A + FR ++          Y+ LI G C+ G +  A 
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 553

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G   +VVTYN +++G C +  + +A +LF +M  +GV P+  TF TL+ G 
Sbjct: 554 KVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 613

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++   +K V L   M +RN
Sbjct: 614 XKDGNMNKAVTLFEMMIQRN 633



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 132/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A R+ D M  +GV P+   +S LI      G +D+A + F  M   G   + V Y  
Sbjct: 479 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 538

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   + E+L +  EML +G    VVTYNT+ +GL +   +  A +LF EM    
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+ T I+G  K+G + +A  LF  +     +  +  Y+ LIDG CK  ++E   
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +    + PN ++Y I+I+G+CN G + +A  L+ +M  KG     +T NT++ G 
Sbjct: 659 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 718

Query: 241 IRNNETSKVVELLHRM 256
            R     K  E L  M
Sbjct: 719 CRAGNAVKADEFLSNM 734



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA ++ D M+++G   +   Y+T+++G C    +  A ELF  M   G   +  T+ T
Sbjct: 549 MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 608

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGY K  ++ +++ L+  M+ + ++P VVTYNTL  G  +  ++E   +L+++M    
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 668

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +Y   I+G C  G + EA  L+  +     E  I   + ++ G C+ G    A 
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 728

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E   ++   G++P+ +TYN +I+GF  +  MD+A  L   ME  G+ P+ +T+N ++ G 
Sbjct: 729 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 788

Query: 241 IRNNETSKVVELLHRMDER 259
            R     +   ++ +M ER
Sbjct: 789 SRQGRMQEAELIMLKMIER 807



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 121/236 (51%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           ++L+ G    G +D A E++  +  +G   NV T N +IN  CK + +E + +  S+M  
Sbjct: 327 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 386

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           KG+ P VVTYNTL +       +E A +L D M    +     TYN  I+GLCK G  + 
Sbjct: 387 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 446

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A  +   +  +        Y+ L+   C+   +  A  +F  +P  G++P++V+++ +I 
Sbjct: 447 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 506

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
               +G +D+A   F DM+  G+AP+ V +  L+ G  RN   S+ +++   M E+
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 562



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 111/219 (50%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  V+  L+  +    ++    E F  +   G   ++   N+L+ G  K   V+ +  +Y
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E++  G++  V T N + + L +  ++E+      +M+   V  +  TYNT I+  C+ 
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA EL  ++     +  +  Y+ +I+GLCK GK   A  +   + ++G+ P+  TY
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           NI++   C +  M  A  +F +M ++GV P+ V+F+ L+
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 505



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 98/194 (50%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  N + ++ L+  Y + + + E    +  + SKG+  ++   N+L  GL ++  V+ A 
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +++ E+  S V     T N  I+ LCKN  I         +        +  Y+ LI+  
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C+ G LE A+EL  S+   GL P V TYN +I+G C  G+  +A  +  +M   G++P+ 
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 231 VTFNTLMLGCIRNN 244
            T+N L++ C RN+
Sbjct: 464 ATYNILLVECCRND 477



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 64/117 (54%)

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           E  E FR L+     + I A + L+ GL K+G ++ AWE++Q + R G+  NV T NIMI
Sbjct: 306 EGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMI 365

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +  C + +++       DME KGV P+ VT+NTL+    R     +  EL+  M  +
Sbjct: 366 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 422



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P V  ++ L     +  ++    + F  ++   +    +  N+ + GL K G++  A
Sbjct: 285 GSNPLV--FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E+++ +     ++ +   + +I+ LCK  K+E        +   G+ P+VVTYN +I+ 
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +C  G +++A +L   M  KG+ P   T+N ++ G  +  +  +   +L  M
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  L++ M   G+ P+   Y+ +++GF   G +  A  + + M   G   +  TY +
Sbjct: 759 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 818

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRP 88
           LING+    +++E+  ++ EML +G  P
Sbjct: 819 LINGHVTQNNLKEAFRVHDEMLQRGFVP 846


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 132/252 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E S +   M Q+G   +A  Y+ ++DGFC +G++ +A E+   M        V TY  ++
Sbjct: 581 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 640

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  SKGI   VV Y++L  G  ++ +++ A  + +EM    + 
Sbjct: 641 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 700

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N+ +D L K   I EA   F++++ +KC      YS LI+GLC++ K   A+  
Sbjct: 701 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVF 760

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +Q + + GL+PNVVTY  MI G    G +  A+ LF   +A G  P+  +FN L+ G   
Sbjct: 761 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 820

Query: 243 NNETSKVVELLH 254
            N   +  ++  
Sbjct: 821 ANRAMEAYQVFE 832



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RL + M+  G   N  VY++LI  F + G  +   ++F  +   GC  ++   NT
Sbjct: 474 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 533

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  +VE+   ++ ++ S G  P V +Y+ L HGL +  Q      +F  M+   
Sbjct: 534 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 593

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   YN  +DG CK+G + +A E+   ++    +  +  Y  ++DGL KI +L+ A+
Sbjct: 594 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 653

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G+  NVV Y+ +I GF   G++D+A+ +  +M  KG+ PN  T+N+L+   
Sbjct: 654 MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 713

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  E ++ +     M E
Sbjct: 714 VKAEEINEALVCFQSMKE 731



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 124/239 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA ++ +   QRG  P+   Y +LIDG    G++D A  LF  M   G   N V Y +
Sbjct: 439 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 498

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +      E+   ++ E++ +G +P +   NT    +F+  +VE    +F++++   
Sbjct: 499 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 558

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y+  I GL K G   E + +F  ++     L   AY+ ++DG CK GK+  A+
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 618

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           E+ + +    + P V TY  ++ G     ++D+A+ LF + ++KG+  N V +++L+ G
Sbjct: 619 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 677



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L ++M ++   PN+  Y+ +ID  CL G ++ A  +   M+      N++T N 
Sbjct: 370 VDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 428

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + +EE+  ++     +G  P  VTY +L  GL +  QV+ A +LF++M  + 
Sbjct: 429 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 488

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A    Y + I     +G   +  ++F+ L    C+  +   +  +D + K G++E   
Sbjct: 489 HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 548

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G +P+V +Y+I+IHG    GQ  +  ++F  M+ +G A +   +N ++ G 
Sbjct: 549 MIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 608

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ +  K  E+L  M E+
Sbjct: 609 CKSGKVHKAYEILEEMKEK 627



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 35/289 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++  ++   +I+RG +P+  + +T +D     GE+++ R +F  +   G + +V +Y+ L
Sbjct: 510 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 569

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     E+ N++  M  +G       YN +  G  +  +V  A ++ +EM+   V
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 629

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY   +DGL K   + EA  LF   +    EL +  YS LIDG  K+G+++ A+ 
Sbjct: 630 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 689

Query: 182 LFQSLPRVGLMPNVVTYN-----------------------------------IMIHGFC 206
           + + + + GL PNV T+N                                   I+I+G C
Sbjct: 690 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 749

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
              + +KA   + DM+ +G+ PN VT+ T++ G  +    +    L  R
Sbjct: 750 RVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 798



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 119/239 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+LD M    + PN    + ++D  C   +++ A ++F S    GC  + VTY +
Sbjct: 404 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 463

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K   V+E+  L+ +ML  G     V Y +L    F   + E   K+F E+    
Sbjct: 464 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 523

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + +  NT++D + K G + +   +F  +R       + +YS LI GL K G+     
Sbjct: 524 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 583

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +F ++ + G   +   YN ++ GFC  G++ KA+++  +M+ K V P   T+  ++ G
Sbjct: 584 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 642



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 113/223 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +L+ M ++ V+P    Y  ++DG      +D A  LF      G   NVV Y++LI
Sbjct: 616 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 675

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K   ++E+  +  EM+ KG+ P V T+N+L   L +  ++  AL  F  M+     
Sbjct: 676 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCP 735

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T TY+  I+GLC+     +A   ++ ++       +  Y+ +I GL K+G +  A+ L
Sbjct: 736 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 795

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           F+     G +P+  ++N +I G  N  +  +A+ +F +   +G
Sbjct: 796 FERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRG 838



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 97/179 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ M+++G+ PN + +++L+D      EI+ A   F SM    C  N  TY+ 
Sbjct: 684 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSI 743

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+ +   ++   + +M  +G+ P VVTY T+  GL ++  +  A  LF+  + + 
Sbjct: 744 LINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 803

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
              + +++N  I+G+      +EA ++F   R+  C + I++   L+D L K   LE A
Sbjct: 804 GIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 89/184 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L +    +G+  N  +YS+LIDGF   G ID A  +   M   G   NV T+N+
Sbjct: 649 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 708

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K +++ E+L  +  M      P   TY+ L +GL  + +   A   + +MQ   
Sbjct: 709 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 768

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T I GL K G I +A  LF   +         +++ LI+G+    +   A+
Sbjct: 769 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 828

Query: 181 ELFQ 184
           ++F+
Sbjct: 829 QVFE 832



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   + +M +   RP    Y+ LI         +RA EL   M   G    V  + T
Sbjct: 160 LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTT 219

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+    +   V ++L L  E+    + P +V YN       +   V+ A K F E++   
Sbjct: 220 LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG 279

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y + I  LCK G + EA ELF  +   +      AY+ +I G    G+ E A+
Sbjct: 280 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 339

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +L + L   G +P+VV++N ++       ++D+A  LF  M+ K   PN  T+N ++
Sbjct: 340 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIII 395



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L     + + +++++   + M     RP    Y  L   L E  + E AL+L  +MQ   
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  + T +  L + G + +A  L   ++    E  I  Y+  ID   K G ++ AW
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F  L   GL P+ V+Y  MI   C  G++ +A +LF  MEA+   P    +NT+++G 
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 241 IRNNETSKVVELLHRMDERN 260
                     +LL R+ ER 
Sbjct: 330 GSAGRFEDAYKLLERLRERG 349



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 68/135 (50%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN + YS LI+G C   + ++A   +  M   G + NVVTY T+I+G  K  ++ ++ +L
Sbjct: 736 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 795

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +    + G  P   ++N L  G+   ++   A ++F+E +         +  + +D L K
Sbjct: 796 FERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNK 855

Query: 138 NGYIVEAAELFRTLR 152
           +  + +AA +   LR
Sbjct: 856 SECLEQAAIVGAVLR 870


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  153 bits (387), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 131/239 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ L D M + G+ PN   ++TLIDG C  G+ID A   F  M   G   +++TYN 
Sbjct: 312 VEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNA 371

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+  D++E+  L +EM+  G +P  +T+ TL  G  +   ++ AL++ D M    
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +   I GLC++G + +A  + + +     +     Y+ +ID  CK G ++   
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGA 491

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + + R G +P VVTYN +++GFC  GQM  A  L   M    V PN +TFN L+ G
Sbjct: 492 KLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDG 550



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 133/246 (54%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G  PN ++++ L+ GFC  G++  AR +F  +   G   +VV++NTLI+GYC++K+
Sbjct: 217 VLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKN 276

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           VEE   L S M S+ I P V TY+ L +GL +  +VE A  LFDEM    +     T+ T
Sbjct: 277 VEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTT 336

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK+G I  A   F  ++       +  Y+ LI+GLC+ G L+ A +L   +   G
Sbjct: 337 LIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P+ +T+  ++ G C DG MD A ++   M  +G+  + V F  L+ G  R+       
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456

Query: 251 ELLHRM 256
            +L  M
Sbjct: 457 RMLKDM 462



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   L  +M    + P+ F YS LI+G C    ++ A  LF  M   G + N VT+ T
Sbjct: 277 VEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTT 336

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   ++ +L  +  M  +GIRP ++TYN L +GL     ++ A KL +EM  + 
Sbjct: 337 LIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+ T +DG CK+G +  A E+   +     EL   A++ LI GLC+ G++  A 
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   G  P+  TY ++I  FC  G +     L  +M+  G  P  VT+N LM G 
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LLH M
Sbjct: 517 CKQGQMKNAKMLLHAM 532



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 8/222 (3%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           E ++ +   G   NV  +N L++G+CK  DV  +  ++ E+  +G+RP+VV++NTL  G 
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
                VE    L   M+   ++ +  TY+  I+GLCK   + EA  LF  +    CE+G+
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM----CEMGL 327

Query: 161 EA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
                 ++ LIDG CK GK++ A   F+ +   G+ P+++TYN +I+G C DG + +A  
Sbjct: 328 VPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARK 387

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           L  +M   G  P+ +TF TLM GC ++ +    +E+  RM E
Sbjct: 388 LLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVE 429



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 113/210 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R  ++M  RG+RP+   Y+ LI+G C  G++  AR+L   M  NG   + +T+ T
Sbjct: 347 IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTT 406

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK  D++ +L +   M+ +GI    V +  L  GL    +V  A ++  +M  + 
Sbjct: 407 LMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAG 466

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY   ID  CK G +   A+L + ++      G+  Y+ L++G CK G+++ A 
Sbjct: 467 HKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAK 526

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
            L  ++  + ++PN +T+NI++ G C  G 
Sbjct: 527 MLLHAMLNMEVVPNDITFNILLDGHCKHGS 556



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 3/202 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL+ MI  G +P+   ++TL+DG C  G++D A E+   M   G   + V +  
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA 441

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+   V ++  +  +MLS G +P   TY  +     +   V+   KL  EMQ   
Sbjct: 442 LISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDG 501

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  ++G CK G +  A  L   +  ++       ++ L+DG CK G     +
Sbjct: 502 RVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS-SVDF 560

Query: 181 ELFQSLPRVGLMPNVVTYNIMI 202
           ++F      GL+ +  +Y  ++
Sbjct: 561 KIFNG--EKGLVSDYASYTALV 580



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 98/208 (47%), Gaps = 1/208 (0%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE-HALK 111
           H+V+ ++ LI  Y  ++ +E+++     +        V   + L   + +++Q   H  +
Sbjct: 153 HSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWE 212

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
            + E+           +N  + G CK G ++ A  +F  +        + +++ LI G C
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           +   +E  + L   +    + P+V TY+ +I+G C + ++++A+ LF +M   G+ PN V
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
           TF TL+ G  ++ +    +     M +R
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDR 360


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 125/227 (55%), Gaps = 1/227 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +  + MIQR V PN   Y++LI+G C+ G +D A+++   +   G   N VTYNTLI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK K V++ + +   M   G+     TYNTL+ G  +  +   A K+   M    V 
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +DGLC +G I +A      L+  K  +GI  Y+ +I GLCK  K+E AW L
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAP 228
           F SL   G+ P+V+TY  M+ G        +AH+L+  M+ + G+ P
Sbjct: 452 FCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 141/259 (54%), Gaps = 4/259 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           ++R+L  M++ G+ P+   +S LID +   G++  A++ +  M       N+VTYN+LIN
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C    ++E+  + + ++SKG  P  VTYNTL +G  +  +V+  +K+   M    V  
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS--CLIDGLCKIGKLETAWE 181
           +T TYNT   G C+ G    A ++    R++ C +  + Y+   L+DGLC  GK+  A  
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLG--RMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             + L +   +  ++TYNI+I G C   +++ A  LF  +  KGV+P+ +T+ T+M+G  
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475

Query: 242 RNNETSKVVELLHRMDERN 260
           R     +  EL  +M + +
Sbjct: 476 RKRLWREAHELYRKMQKED 494



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 122/249 (48%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L  M++ G  P+   + +L++GFC       A  L   +   G   NVV YNT+I+  C+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              V  +L++   M   GIRP VVTYN+L   LF       + ++  +M    ++ +  T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           ++  ID   K G ++EA + +  +        I  Y+ LI+GLC  G L+ A ++   L 
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G  PN VTYN +I+G+C   ++D    +   M   GV  +  T+NTL  G  +  + S
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376

Query: 248 KVVELLHRM 256
              ++L RM
Sbjct: 377 AAEKVLGRM 385



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 127/256 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D ++  G  PN  +Y+T+ID  C  G+++ A ++   M   G   +VVTYN+LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
                +     S  + S+M+  GI P V+T++ L     +  Q+  A K ++EM    V 
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN+ I+GLC +G + EA ++   L           Y+ LI+G CK  +++   ++
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R G+  +  TYN +  G+C  G+   A  +   M + GV P+  TFN L+ G   
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406

Query: 243 NNETSKVVELLHRMDE 258
           + +  K +  L  + +
Sbjct: 407 HGKIGKALVRLEDLQK 422



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 116/225 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  + + ++TLID FC    +  A      M   G   ++VT+ +L+NG+C      E+
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L  +++  G  P VV YNT+   L E  QV  AL +   M+   +  +  TYN+ I  
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L  +G    +A +   +  +     +  +S LID   K G+L  A + +  + +  + PN
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +VTYN +I+G C  G +D+A  +   + +KG  PN VT+NTL+ G
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 124/239 (51%), Gaps = 3/239 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+   +S L+       + +    LF  +++ G  H++ ++ TLI+ +C+   +  +L+ 
Sbjct: 77  PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +M+  G  P++VT+ +L +G   +++   A+ L D++           YNT ID LC+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G +  A ++ + ++ +     +  Y+ LI  L   G    +  +   + R+G+ P+V+T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVELL 253
           ++ +I  +  +GQ+ +A   + +M  + V PN VT+N+L+ G CI    +E  KV+ +L
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 83/165 (50%)

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           ++L L+ +M      P++V ++ L   + ++++ E  + LF  ++   ++ +  ++ T I
Sbjct: 62  DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           D  C+   +  A      +  L  E  I  +  L++G C + +   A  L   +  +G  
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           PNVV YN +I   C  GQ++ A D+   M+  G+ P+ VT+N+L+
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 1/163 (0%)

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L  GL  I +   AL LF +M  S        ++  +  + K         LFR L +L 
Sbjct: 51  LRSGLHSI-KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG 109

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
               + +++ LID  C+  +L  A      + ++G  P++VT+  +++GFC+  +  +A 
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            L   +   G  PN V +NT++       + +  +++L  M +
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 146/259 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L+D M  +G++P  F Y+ +I+G C TG+  RA+ +   M   G   +  TYN 
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  ++ ++  ++ EM S+G+ P +V+++ L   L +   ++ ALK F +M+++ 
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +   Y   I G C+NG + EA ++   +    C L +  Y+ +++GLCK   L  A 
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +   G+ P+  T+  +I+G+  DG M+KA  LF  M  + + P+ VT+NTL+ G 
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 544

Query: 241 IRNNETSKVVELLHRMDER 259
            + +E  KV EL + M  R
Sbjct: 545 CKGSEMEKVNELWNDMISR 563



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 141/259 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M +RGV P+ + ++TLI+G+   G +++A  LF  M       +VVTYNT
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK  ++E+   L+++M+S+ I P  ++Y  L +G   +  V  A +L+DEM    
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A   T NT + G C+ G  V+A E    + +         Y+ LI+G  K   ++ A+
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL+P+V+TYN++++GF   G+M +A  + L M  +GV P+  T+ +L+ G 
Sbjct: 660 ALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGH 719

Query: 241 IRNNETSKVVELLHRMDER 259
           +  N   +   +   M +R
Sbjct: 720 VTQNNLKEAFRVHDEMLQR 738



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   +++ GV+ N +  + +I+  C   +I+  +     M+  G   +VVTYNT
Sbjct: 235 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 294

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YC+   +EE+  L   M  KG++P V TYN + +GL +  +   A  + DEM    
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 354

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +T+TYN  +   C+N  +++A  +F  +        + ++S LI  L K G L+ A 
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F+ +   GL P+ V Y I+I GFC +G M +A  +  +M  +G   + VT+NT++ G 
Sbjct: 415 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 474

Query: 241 IRNNETSKVVELLHRMDER 259
            +    S+  EL   M ER
Sbjct: 475 CKEKMLSEADELFTEMTER 493



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++     L  M ++GV P+   Y+TLI+ +C  G ++ A EL  SM   G    V TYN 
Sbjct: 270 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 329

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CKT     +  +  EML  G+ P   TYN L         +  A ++FDEM    
Sbjct: 330 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 389

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  +++  I  L KNG + +A + FR ++          Y+ LI G C+ G +  A 
Sbjct: 390 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 449

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +   G + +VVTYN +++G C +  + +A +LF +M  +GV P+  TF TL+ G 
Sbjct: 450 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 509

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++   +K V L   M +RN
Sbjct: 510 SKDGNMNKAVTLFEMMIQRN 529



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA ++ D M+++G   +   Y+T+++G C    +  A ELF  M   G   +  T+ T
Sbjct: 445 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 504

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGY K  ++ +++ L+  M+ + ++P VVTYNTL  G  +  ++E   +L+++M    
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 564

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +Y   I+G C  G + EA  L+  +     E  I   + ++ G C+ G    A 
Sbjct: 565 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 624

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E   ++   G++P+ +TYN +I+GF  +  MD+A  L   ME  G+ P+ +T+N ++ G 
Sbjct: 625 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 684

Query: 241 IRNNETSKVVELLHRMDER 259
            R     +   ++ +M ER
Sbjct: 685 SRQGRMQEAELIMLKMIER 703



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 132/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A R+ D M  +GV P+   +S LI      G +D+A + F  M   G   + V Y  
Sbjct: 375 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 434

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+   + E+L +  EML +G    VVTYNT+ +GL +   +  A +LF EM    
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+ T I+G  K+G + +A  LF  +     +  +  Y+ LIDG CK  ++E   
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +    + PN ++Y I+I+G+CN G + +A  L+ +M  KG     +T NT++ G 
Sbjct: 555 ELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGY 614

Query: 241 IRNNETSKVVELLHRM 256
            R     K  E L  M
Sbjct: 615 CRAGNAVKADEFLSNM 630



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 121/236 (51%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           ++L+ G    G +D A E++  +  +G   NV T N +IN  CK + +E + +  S+M  
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           KG+ P VVTYNTL +       +E A +L D M    +     TYN  I+GLCK G  + 
Sbjct: 283 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 342

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A  +   +  +        Y+ L+   C+   +  A  +F  +P  G++P++V+++ +I 
Sbjct: 343 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 402

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
               +G +D+A   F DM+  G+AP+ V +  L+ G  RN   S+ +++   M E+
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 458



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 111/219 (50%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  V+  L+  +    ++    E F  +   G   ++   N+L+ G  K   V+ +  +Y
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E++  G++  V T N + + L +  ++E+      +M+   V  +  TYNT I+  C+ 
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA EL  ++     +  +  Y+ +I+GLCK GK   A  +   + ++G+ P+  TY
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           NI++   C +  M  A  +F +M ++GV P+ V+F+ L+
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 401



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 98/194 (50%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  N + ++ L+  Y + + + E    +  + SKG+  ++   N+L  GL ++  V+ A 
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +++ E+  S V     T N  I+ LCKN  I         +        +  Y+ LI+  
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C+ G LE A+EL  S+   GL P V TYN +I+G C  G+  +A  +  +M   G++P+ 
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 231 VTFNTLMLGCIRNN 244
            T+N L++ C RN+
Sbjct: 360 ATYNILLVECCRND 373



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 64/117 (54%)

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           E  E FR L+     + I A + L+ GL K+G ++ AWE++Q + R G+  NV T NIMI
Sbjct: 202 EGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMI 261

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +  C + +++       DME KGV P+ VT+NTL+    R     +  EL+  M  +
Sbjct: 262 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGK 318



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P V  ++ L     +  ++    + F  ++   +    +  N+ + GL K G++  A
Sbjct: 181 GSNPLV--FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 238

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E+++ +     ++ +   + +I+ LCK  K+E        +   G+ P+VVTYN +I+ 
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +C  G +++A +L   M  KG+ P   T+N ++ G  +  +  +   +L  M
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 350



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  L++ M   G+ P+   Y+ +++GF   G +  A  + + M   G   +  TY +
Sbjct: 655 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 714

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRP 88
           LING+    +++E+  ++ EML +G  P
Sbjct: 715 LINGHVTQNNLKEAFRVHDEMLQRGFVP 742


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 129/246 (52%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEE 73
           G+ PN + Y T+I G+C  G +D A ++F  M   G      V YN LI GYC    ++ 
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L     M+ +G+  TV TYN L H LF   +   A +L +EM    +A +  TYN  I+
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 664

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G CK G + +A E+F  +        +  Y+ LI  L K G+++   +LF    R G+ P
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++V YN +I+     G +D+A ++  +ME K +AP+ VT+NTLM G        +  +L+
Sbjct: 725 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784

Query: 254 HRMDER 259
             M ER
Sbjct: 785 DEMTER 790



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 130/255 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L++ M  +G+ P+ F Y+ LI+G C  G + +A E+F +M   G    VVTY  LI
Sbjct: 639 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 698

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               K   V+E+  L+ E + +GIRP +V YN L +       ++ A ++  EM+   +A
Sbjct: 699 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 758

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT + GLC  G + EA +L   +     +  +  Y+ LI G    G ++ A  +
Sbjct: 759 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 818

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P ++TYN +I G C +GQ D A ++  +M   G+ P+  T+ +L+ G   
Sbjct: 819 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 878

Query: 243 NNETSKVVELLHRMD 257
            +E +   E L   D
Sbjct: 879 EDERAIDDERLAAAD 893



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEID---------------------- 37
           +DEA ++ D M+ +G V+P A +Y+ LI G+C  G++D                      
Sbjct: 566 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 625

Query: 38  -------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
                         A EL   M   G   +V TYN LING+CK  +V+++L ++  M  +
Sbjct: 626 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 685

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+R TVVTY  L + L +  QV+   KLFDE     +  +   YN  I+    +G I  A
Sbjct: 686 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 745

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E+   +   +       Y+ L+ GLC +G+++ A +L   +   G+ P++VTYN +I G
Sbjct: 746 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 805

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +   G +  A  +  +M  KG  P  +T+N L+ G  +N +      ++  M E
Sbjct: 806 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 859



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 8/241 (3%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
            ++ ++   C  G+  RA EL   M       N VTYNT+I G+C    V+ +L++  EM
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 540

Query: 82  LSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNG 139
             + GI P   TY T+  G  ++ +V+ A+K+FDEM    +V  E   YN  I G C  G
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600

Query: 140 YIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
            + + A L+R   V +   + +  Y+ L+  L   G+   A+EL + +   GL P+V TY
Sbjct: 601 KL-DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           NI+I+G C +G + KA ++F +M  +GV    VT+  L+    +  +  +  +L      
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719

Query: 259 R 259
           R
Sbjct: 720 R 720



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 82/135 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++  M ++ + P+   Y+TL+ G CL G +D AR+L   M   G   ++VTYNT
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY    DV+++L + +EM++KG  PT++TYN L  GL +  Q + A  +  EM  + 
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861

Query: 121 VAAETSTYNTFIDGL 135
           +  + STY + I+GL
Sbjct: 862 ITPDDSTYISLIEGL 876



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+      +    SL LYS M S  +  +  +     H L        A  LF +M  
Sbjct: 421 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS----LHPLLSALPSAPAFALFADMFR 476

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +   T+T+N  +  LC  G    A EL R +           Y+ +I G C  G+++ 
Sbjct: 477 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQA 532

Query: 179 AWELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTL 236
           A ++ + +  R G+ PN  TY  +I G+C  G++D+A  +F +M  KG V P  V +N L
Sbjct: 533 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 592

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G     +    +    RM ER
Sbjct: 593 IGGYCDQGKLDTALLYRDRMVER 615


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 136/255 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  LLD M    ++PN  VY+ LIDGF   G  D A ++   M   G   N +TY+ L
Sbjct: 309 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 368

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G CK   ++ +  L  +M+    RP  +TYN +  G F  H  + A +L  EM+++ +
Sbjct: 369 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGI 428

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    TY+  I GLC++G   +A++L   +     +     Y+ LI G C+ G +  A E
Sbjct: 429 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACE 488

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + +V ++P++  YN +I G    G+++++   F  M+ +G+ PN  T++ L+ G +
Sbjct: 489 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 548

Query: 242 RNNETSKVVELLHRM 256
           +N +     +L+ RM
Sbjct: 549 KNGDLESAEQLVQRM 563



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 130/255 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA +++  M+  GV+PN   Y  L+ G C  G++DRA  L   M  +    + +TYN +
Sbjct: 344 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+ +    +++  L SEM + GI P V TY+ + HGL +  + E A  L +EM    +
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 Y   I G C+ G +  A E+F  +  +     +  Y+ LI GL K+G++E + +
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 523

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  +   GL+PN  TY+ +IHG+  +G ++ A  L   M   G+ PN V +  L+    
Sbjct: 524 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 583

Query: 242 RNNETSKVVELLHRM 256
           ++++  KV      M
Sbjct: 584 KSDDIEKVSSTFKSM 598



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 124/259 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A ++L  M +RG   N   Y+ LI G C +G ++ A      M+  G + +  TY  L
Sbjct: 239 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGAL 298

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING CK++   E+  L  EM    ++P VV Y  L  G       + A K+  EM  + V
Sbjct: 299 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 358

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY+  + GLCK G +  A+ L + +           Y+ +I+G  +    + A+ 
Sbjct: 359 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 418

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G+ PNV TY+IMIHG C  G+ +KA DL  +M  KG+ PN   +  L+ G  
Sbjct: 419 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 478

Query: 242 RNNETSKVVELLHRMDERN 260
           R    S   E+  +M + N
Sbjct: 479 REGNVSLACEIFDKMTKVN 497



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 35/290 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++AS LL+ M  +G++PNAFVY+ LI G+C  G +  A E+F  M     + ++  YN+L
Sbjct: 449 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 508

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM----- 116
           I G  K   VEES   +++M  +G+ P   TY+ L HG  +   +E A +L   M     
Sbjct: 509 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 568

Query: 117 ---------------QHSDVAAETSTYNTFID---------------GLCKNGYIVEAAE 146
                          +  D+   +ST+ + +D                L  +G +  A  
Sbjct: 569 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 628

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +   +        +  YS LI GLCK    E A+ +   + + G+ PN+V YN +I G C
Sbjct: 629 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 688

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G +  A ++F  + AKG+ PNCVT+ +L+ G  +  + S    L + M
Sbjct: 689 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 738



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E+++    M +RG+ PN F YS LI G+   G+++ A +L   M   G   N V Y  
Sbjct: 518 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 577

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  Y K+ D+E+  + +  ML +G+      Y  L H L     +E A ++   ++ + 
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y++ I GLCK     +A  +   +     +  I  Y+ LIDGLCK G +  A 
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F S+   GL+PN VTY  +I G C  G +  A  L+ +M A G+ P+   ++ L  GC
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 757

Query: 241 IRNNETSKVVELLHRM 256
               +  + + L+  M
Sbjct: 758 SSAGDLEQAMFLIEEM 773



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 129/245 (52%), Gaps = 1/245 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A R+L  + + G  P+  VYS+LI G C T + ++A  +   M   G   N+V YN 
Sbjct: 623 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 682

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK+ D+  + N+++ +L+KG+ P  VTY +L  G  ++  + +A  L++EM  + 
Sbjct: 683 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 742

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y+    G    G + +A  L   +  L+    I +++ L+DG CK GK++   
Sbjct: 743 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETL 801

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL+PN +T   +I G    G++ + H +F++++ K        F++L +  
Sbjct: 802 KLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDM 861

Query: 241 IRNNE 245
           I   +
Sbjct: 862 INQGK 866



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 124/257 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RLL  M   G+ PN + YS +I G C +GE ++A +L   M   G   N   Y  LI
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+  +V  +  ++ +M    + P +  YN+L  GL ++ +VE + K F +MQ   + 
Sbjct: 475 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 534

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  I G  KNG +  A +L + +     +     Y  L++   K   +E     
Sbjct: 535 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 594

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+S+   G+M +   Y I+IH   + G M+ A  +   +E  G  P+   +++L+ G  +
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 654

Query: 243 NNETSKVVELLHRMDER 259
             +  K   +L  M ++
Sbjct: 655 TADREKAFGILDEMSKK 671



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 139/283 (49%), Gaps = 33/283 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  +LD M ++GV PN   Y+ LIDG C +G+I  AR +F S+   G + N VTY +L
Sbjct: 659 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 718

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---QH 118
           I+G CK  D+  +  LY+EML+ GI P    Y+ L  G      +E A+ L +EM    H
Sbjct: 719 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH 778

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR---VLKCELGIEAYSCLIDGLCKIGK 175
           + +    S++N  +DG CK G + E  +L   +    ++   L IE    +I GL + GK
Sbjct: 779 ASI----SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN---IISGLSEAGK 831

Query: 176 L---------------ETAWELFQSL----PRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           L               E+A   F SL       G +P  V  + MI   C +G +DKA  
Sbjct: 832 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKALM 890

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           L   + AK     C ++  ++    R  + S+ + LL  MD+R
Sbjct: 891 LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 933



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 5/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++ S     M+ +GV  +  +Y  LI     +G ++ A  +   ++ NG + +V  Y++
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CKT D E++  +  EM  KG+ P +V YN L  GL +   + +A  +F+ +    
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 707

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + IDG CK G I  A  L+  +           YS L  G    G LE A 
Sbjct: 708 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 767

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G   ++ ++N ++ GFC  G+M +   L   +  +G+ PN +T   ++ G 
Sbjct: 768 FLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 826

Query: 241 IRNNETSKV----VELLHRMDE 258
               + S+V    VEL  +  E
Sbjct: 827 SEAGKLSEVHTIFVELQQKTSE 848



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           + + +  YCK ++ + +  +  EM  +G     VTYN L  GL     VE A     +M+
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +  +  TY   I+GLCK+    EA  L   +   + +  +  Y+ LIDG  + G  +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A+++ + +   G+ PN +TY+ ++ G C  GQMD+A  L   M      P+ +T+N ++
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 238 LGCIRNNETSKVVELLHRMD 257
            G  R++       LL  M+
Sbjct: 405 EGHFRHHSKKDAFRLLSEME 424



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 20/210 (9%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + M+  G+ P+AFVYS L  G    G++++A  L   M + G   ++ ++N L++G+C
Sbjct: 734 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFC 792

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   ++E+L L   ++ +G+ P  +T   +  GL E  ++     +F E+Q     +   
Sbjct: 793 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 852

Query: 127 TYNT-FIDGL-----------------CKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
            +++ F+D +                 CK G + +A  L   +      +G  +Y  ++D
Sbjct: 853 HFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVD 912

Query: 169 GLCKIGKLETAWELFQSLPRVG-LMPNVVT 197
            LC+ GKL  A  L + + + G L P +V 
Sbjct: 913 NLCRKGKLSEALNLLKEMDKRGNLQPTLVA 942


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+  M    V P+A+ Y+TLI G C  G    A  +   M   GC+ +VVTY  
Sbjct: 150 LDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTI 206

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK    ++++ L  EM  KG  P +VTYN + +G+ +  +VE A++    +    
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T +YN  + GL       +A +L   +    C   +  ++ LI  LC+ G +E A 
Sbjct: 267 CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAM 326

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ + +P+ G  PN ++YN ++H FC   ++ KA +    M ++G  P+ V++NTL+   
Sbjct: 327 EVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTAL 386

Query: 241 IRNNETSKVVELLHRMDERN 260
            RN E    +ELLH++ ++ 
Sbjct: 387 CRNGEVDVAIELLHQLKDKG 406



 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 130/254 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+ M +RG  P+   Y+ L++  C      +A +L   M   GC  ++VTYN ++NG C
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   VE+++     + S G  P  V+YN +  GLF   + E A KL +EM H        
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N  I  LC+ G +  A E+   +    C     +Y+ L+   CK  K+  A E  + +
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  P++V+YN ++   C +G++D A +L   ++ KG +P  +++NT++ G  +  +T
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427

Query: 247 SKVVELLHRMDERN 260
            + +ELL  M  + 
Sbjct: 428 KEALELLDEMTSKG 441



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 128/259 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +L++ M  +G  PN   ++ LI   C  G ++ A E+   M   GC  N ++YN L
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK K + +++     M+S+G  P +V+YNTL   L    +V+ A++L  +++    
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    +YNT IDGL K G   EA EL   +     +  I  YS +  GLC+  ++E A  
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  +  +G+ P    YN ++ G C   +   A DLF  M + G  PN  T+  L+ G  
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLA 527

Query: 242 RNNETSKVVELLHRMDERN 260
                 +  EL  ++  R 
Sbjct: 528 YEGLVKEARELFAQLCSRG 546



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 127/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A   L  +   G  PN   Y+ ++ G       + A +L   M   GC  NVVT+N 
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C+   VE ++ +  +M   G  P  ++YN L H   +  ++  A++  + M    
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRG 371

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YNT +  LC+NG +  A EL   L+   C   + +Y+ +IDGL K GK + A 
Sbjct: 372 CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEAL 431

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL P+++TY+ +  G C + ++++A   F  ++  G+ P    +N ++LG 
Sbjct: 432 ELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGL 491

Query: 241 IRNNETSKVVELLHRM 256
            +  ET   ++L   M
Sbjct: 492 CKRRETHNAIDLFAYM 507



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 121/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L+ M Q G  PN+  Y+ L+  FC   +I +A E    M   GC  ++V+YNT
Sbjct: 322 VEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNT 381

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  +V+ ++ L  ++  KG  P +++YNT+  GL +  + + AL+L DEM    
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T   GLC+   I EA   F  ++ +        Y+ ++ GLCK  +   A 
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAI 501

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +LF  +   G MPN  TY I++ G   +G + +A +LF  + ++GV
Sbjct: 502 DLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 126/249 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M  +G  P+   Y+ +++G C  G ++ A E   ++   GC  N V+YN ++
Sbjct: 219 QAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVL 278

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G    +  E++  L  EM  KG  P VVT+N L   L     VE A+++ ++M      
Sbjct: 279 KGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCT 338

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + +YN  +   CK   I +A E    +    C   I +Y+ L+  LC+ G+++ A EL
Sbjct: 339 PNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIEL 398

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L   G  P +++YN +I G    G+  +A +L  +M +KG+ P+ +T++T+  G  R
Sbjct: 399 LHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCR 458

Query: 243 NNETSKVVE 251
            +   + V 
Sbjct: 459 EDRIEEAVR 467



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A   ++LM+ RG  P+   Y+TL+   C  GE+D A EL   +   GC   +++YNT+I
Sbjct: 359 KAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVI 418

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K    +E+L L  EM SKG++P ++TY+T+  GL    ++E A++ F ++Q   + 
Sbjct: 419 DGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIR 478

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              + YN  + GLCK      A +LF  +    C      Y+ L++GL   G ++ A EL
Sbjct: 479 PTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAREL 538

Query: 183 FQSLPRVGLMPNVVTYNIMIHG 204
           F  L   G    VV   +M  G
Sbjct: 539 FAQLCSRG----VVNKKLMKKG 556



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 16/128 (12%)

Query: 141 IVEAAELFRTLRVLKCELGIEAYS--------CLIDGLCKIGKLETAWELFQSLPRVGLM 192
           +V   EL   LR++    G+   S         LI  LC  G+   A  +  +       
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAAS-----G 131

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P+V+ YN M+ G+C  GQ+D A  L  DM    V P+  T+NTL+ G      TS  + +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 253 LHRMDERN 260
           L  M  R 
Sbjct: 189 LEDMFRRG 196


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 124/225 (55%), Gaps = 1/225 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCL-TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           M + GVR +    + LI   C  +G ID A E+F  M   GC  +  TY TLING CK  
Sbjct: 146 MREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLG 205

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
              E+  L+ EM +KG  P+VVTY+ L HGL +   V+ A+ LFD+M+   +     TY+
Sbjct: 206 KTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYS 265

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           + +DGLCKNG  +EA EL   +   + +  +  YS LI+GLCK GKL  A E    +   
Sbjct: 266 SLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQ 325

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           GL P+   Y  +I+GFCN  +  +A     +M    ++PN VT++
Sbjct: 326 GLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWS 370



 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 142/265 (53%), Gaps = 11/265 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M +RG  P+++ Y TLI+G C  G+   A+ELF  MD  GC  +VVTY+ 
Sbjct: 172 IDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSC 231

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C+  +V+E++ L+ +M  K I P V TY++L  GL +      A++L + M    
Sbjct: 232 LMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKR 291

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV--LKCELGIEAYSCLIDGLCKIGKLET 178
                 TY+T I+GLCK G + EA E    +++  LK + G+  Y  +I+G C I K + 
Sbjct: 292 HKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGL--YGKIINGFCNIRKFQE 349

Query: 179 AWELFQSLPRVGLMPNVVTY-------NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           A      +    + PN VT+       N+++ G C +G ++++  L++ M  +G++ +  
Sbjct: 350 AATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAG 409

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           TF++L+    +  +  K   +   M
Sbjct: 410 TFDSLVKCFCKKGDLHKAARIFDEM 434



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 123/243 (50%), Gaps = 1/243 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G R +   +  +I       E   A E+   M    C      + ++  GY +     ++
Sbjct: 45  GFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDA 104

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + ++ +M   G +PT  +Y ++F  L E +Q++ A+  +  M+   V     + N  I  
Sbjct: 105 IRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKA 164

Query: 135 LCKNGYIVEAA-ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           LCKN   ++AA E+FR +    C+     Y  LI+GLCK+GK   A ELF+ +   G  P
Sbjct: 165 LCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSP 224

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VVTY+ ++HG C  G +D+A  LF  M+ K + PN  T+++LM G  +N  + + +ELL
Sbjct: 225 SVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELL 284

Query: 254 HRM 256
             M
Sbjct: 285 EMM 287



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYS-------TLIDGFCLTGEIDRARELFVSMDINGCMHN 54
            EA+  LD M+   + PN   +S        ++ G C  G ++R+ +L++ M   G   +
Sbjct: 348 QEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISID 407

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
             T+++L+  +CK  D+ ++  ++ EM+  G  P    ++ +  G ++  +V  A +
Sbjct: 408 AGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFE 464


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A      M  +   P+ F YSTL++G C    +D A  L   M   GC+ N VT+N 
Sbjct: 190 IDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 249

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K  D+  +  L   M  KG  P  VTYNTL HGL    +++ AL L ++M  S 
Sbjct: 250 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 309

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GL K     +   +  ++     +     YS LI GL K GK E A 
Sbjct: 310 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 369

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +   G  PNVV Y   I G C D + D+A D+  +M +KG  PN  T+++LM G 
Sbjct: 370 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 429

Query: 241 IRNNETSKVVELLHRM 256
            +  ++ K + +   M
Sbjct: 430 FKKGDSQKAILVWKEM 445



 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 37/293 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A++L+D M  +G  PN   Y+TLI G CL G++D+A  L   M  + C+ N VTY T
Sbjct: 260 LSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGT 319

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING  K +  E+ +++   M  +G +     Y++L  GLF+  + E+A++L+ EM    
Sbjct: 320 IINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 379

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--------------------RVLKCELGI 160
                  Y  FIDGLC++    EA ++ + +                    +    +  I
Sbjct: 380 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 439

Query: 161 EAY---------------SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
             +               S L++GLC+ G+L  A  ++  +   GL P+VV Y+ MI G 
Sbjct: 440 LVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 499

Query: 206 CNDGQMDKAHDLFLDMEAK--GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C+ G +DK   LF +M+ +     P+ VT+N L     R +  ++ ++LL+ M
Sbjct: 500 CDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 552



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD M   G  PN   ++ LID     G++ RA +L  +M + GC+ N VTYNT
Sbjct: 225 VDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT 284

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++++L+L  +M+S    P  VTY T+ +GL +  + E  + +   M+   
Sbjct: 285 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 344

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A    Y++ I GL K G    A  L++ +    C+  +  Y   IDGLC+  K + A 
Sbjct: 345 QKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAE 404

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ Q +   G +PN  TY+ ++ GF   G   KA  ++ +M ++ +  N V  + L+ G
Sbjct: 405 DILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNG 463



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 6/231 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +RG + N ++YS+LI G    G+ + A  L+  M   GC  NVV Y   I+G C+ + 
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +E+ ++  EMLSKG  P   TY++L  G F+    + A+ ++ EM   D+       + 
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL---- 186
            ++GLC++G + EA  ++  +     +  + AYS +I GLC +G ++   +LF  +    
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 519

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           P+    P+VVTYNI+ +  C    + +A DL   M  +G  P+ +T N  +
Sbjct: 520 PKS--RPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL 568



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 109/212 (51%), Gaps = 3/212 (1%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEML---SKGIRPTVVTYNTLFHGLFEIHQVE 107
           C   V ++N+++N   +  D   +   Y  +    SKG +P ++TYN +   L ++ Q++
Sbjct: 132 CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQID 191

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            A+  F EM   +   +  TY+T ++GLCK   + EA  L   ++   C      ++ LI
Sbjct: 192 RAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLI 251

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           D L K G L  A +L  ++   G +PN VTYN +IHG C  G++DKA  L   M +    
Sbjct: 252 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 311

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           PN VT+ T++ G ++       V +L  M+ER
Sbjct: 312 PNQVTYGTIINGLVKQRRAEDGVHILMSMEER 343



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 106/211 (50%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
            G   N++TYN +I   CK   ++ +++ + EM  K   P V TY+TL +GL +  +V+ 
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A+ L DEMQ         T+N  ID L KNG +  AA+L   + +  C      Y+ LI 
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 287

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC  GKL+ A  L + +     +PN VTY  +I+G     + +    + + ME +G   
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 347

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           N   +++L+ G  +  ++   V L   M E+
Sbjct: 348 NEYIYSSLISGLFKEGKSENAVRLWKEMAEK 378



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 40/201 (19%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  +L  M+ +G  PNAF YS+L+ GF   G+  +A  ++  M      HNVV  + L
Sbjct: 401 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 460

Query: 62  INGYCKTKDVEESLNLYSEMLSKGI----------------------------------- 86
           +NG C++  + E+L +++ ML +G+                                   
Sbjct: 461 LNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 520

Query: 87  --RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
             RP VVTYN LF+ L     +  A+ L + M       ++ T N F++ L +     + 
Sbjct: 521 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQD 580

Query: 145 AELF---RTLRVLKCELGIEA 162
             LF     +R+LK E  + A
Sbjct: 581 GRLFLDELVVRLLKRERKLSA 601



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 23/169 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN--GCMHNVVTY 58
           + EA  +   M+  G++P+   YS++I G C  G +D+  +LF  M         +VVTY
Sbjct: 470 LREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTY 529

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE-IHQVE---------- 107
           N L N  C+  ++  +++L + ML +G  P  +T N     L E I+  +          
Sbjct: 530 NILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELV 589

Query: 108 ----------HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
                      AL++ +EM    +  E ST++  I   CK   I E  +
Sbjct: 590 VRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 638


>gi|255660996|gb|ACU25667.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 376

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  +  L+ GFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++++++++ + M+  G +P    YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L       G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 127/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGEMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++  +L++  Q+G   +AF YS +I+G C    +D+A  +   M  +GC  N   YNT
Sbjct: 110 INKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +G+++ A 
Sbjct: 230 LNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 1/213 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  + ++    + V YN ++NGY +   +++   L+  M S+G R +V
Sbjct: 1   CESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ S    ++ T+   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK   L+ A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            + A  +F +M     +P  +T+NTL+ G  +N
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKN 212


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 142/258 (55%), Gaps = 2/258 (0%)

Query: 3   EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR-ELFVSMDINGCMHNVVTYNT 60
           EA+R   D M++ G +P+ + Y+ LI GFC  G  D A   L     INGC  ++ TY  
Sbjct: 213 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTA 272

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++   K K +EE++ L  ++ + G  PT+ TYN L +GL ++ ++E A+ L  ++  + 
Sbjct: 273 IVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 332

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY + IDGL K     EA +LF+ + +    L    Y+ LI  L + GK+  A 
Sbjct: 333 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQAS 392

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +++++   G +P+VVT + MI G    G++  A  +F  MEA+G+APN V ++ L+ G 
Sbjct: 393 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 452

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +    +E+L +M +
Sbjct: 453 CKARKMDCALEMLAQMKK 470



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 127/260 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  ++  G  P+   Y++LIDG         A +LF  M + G   + V Y  
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTA 377

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI    +T  + ++ ++Y  M S G  P VVT +T+  GL +  ++  A+++F  M+   
Sbjct: 378 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 437

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A     Y+  I GLCK   +  A E+   ++   C      Y+ LIDGLCK G +E A 
Sbjct: 438 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 497

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +   G  P+V TYNI+I GFC  G  D A  +F DM +   + N VT+  L+ G 
Sbjct: 498 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGL 557

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  + +K       M ER 
Sbjct: 558 CKRRQLTKASLYFQHMKERG 577



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 123/258 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L++ +   G  P    Y+ L++G C  G ++ A +L   +  NGC  +VVTY +
Sbjct: 283 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 342

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K K   E+  L+ EM  +G+    V Y  L   L +  ++  A  ++  M    
Sbjct: 343 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T +T IDGL K G I  A  +F+++           YS LI GLCK  K++ A 
Sbjct: 403 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 462

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + +    P+ +TYNI+I G C  G ++ A   F +M   G  P+  T+N L+ G 
Sbjct: 463 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 522

Query: 241 IRNNETSKVVELLHRMDE 258
            +   T     +   M  
Sbjct: 523 CKAGNTDAACGVFDDMSS 540



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 121/246 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L++ +   G  P    Y+ L++G C  G ++ A +L   +  NGC  +VVTY +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K K   E+  L+ EM  +G+    V Y  L   L +  ++  A  ++  M    
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T +T IDGL K G I  A  +F+++           YS LI GLCK  K++ A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + +    P+ +TYN++I G C  G ++ A   F +M   G  P+  T+N L+ G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 241 IRNNET 246
            +   T
Sbjct: 242 CKAGNT 247



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 117/224 (52%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           +I+ A  L   +  NGC   + TYN L+NG CK   +EE+++L  +++  G  P VVTY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           +L  GL +  +   A KLF EM    +A +T  Y   I  L + G I +A+ +++T+   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
            C   +   S +IDGL K G++  A  +F+S+   GL PN V Y+ +IHG C   +MD A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            ++   M+     P+ +T+N L+ G  ++ +          M E
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLE 224



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 125/257 (48%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  ++  G  P+   Y++LIDG         A +LF  M + G   + V Y  
Sbjct: 37  LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTA 96

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI    +T  + ++ ++Y  M S G  P VVT +T+  GL +  ++  A+++F  M+   
Sbjct: 97  LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 156

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A     Y+  I GLCK   +  A E+   ++   C      Y+ LIDGLCK G +E A 
Sbjct: 157 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAAR 216

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA-HDLFLDMEAKGVAPNCVTFNTLMLG 239
             F  +   G  P+V TYNI+I GFC  G  D A H L  +    G   +  T+  ++  
Sbjct: 217 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDW 276

Query: 240 CIRNNETSKVVELLHRM 256
             +N +  + V L+ ++
Sbjct: 277 LAKNKKIEEAVALMEKI 293


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 134/252 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + + M  RG++PNA V++ LID  C  G+ +   EL   M   G   + VTYN 
Sbjct: 326 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 385

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG C+ +D++ +  +  EM S G+RP  VTY TL  G  +  +++ A+++   M    
Sbjct: 386 IVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 445

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   I GL K G   +A  +   +     E     Y+ +ID  C+ G ++T  
Sbjct: 446 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGL 505

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G  P VVTYN++++GFC  GQM  A  L   M   GV+P+ +T+N L+ G 
Sbjct: 506 RLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGH 565

Query: 241 IRNNETSKVVEL 252
            ++ + + + EL
Sbjct: 566 CKHGKVTDIEEL 577



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 124/248 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G+ P A +++ L+      GE+  A+ +F  M   G    VV++NT+I+G C+  D
Sbjct: 231 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGD 290

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +  L+  M   G+ P V TY  L  GL  + ++E A  +F++M    +      +  
Sbjct: 291 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 350

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK G      EL R +R          Y+ +++GLC+   L++A  +   +   G
Sbjct: 351 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 410

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ VTY  +I G+C + ++D A ++  +M A+GV  + VT+  L+ G  +   ++   
Sbjct: 411 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 470

Query: 251 ELLHRMDE 258
            +L  M E
Sbjct: 471 RVLGEMME 478



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 121/260 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  + D M  RGVR     ++T+I G C  G++D A  L   M   G   +V TY  
Sbjct: 256 LASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGA 315

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C+   +E++  ++ +M  +G++P  V +  L     +    E  L+L  EM+   
Sbjct: 316 LIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERG 375

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TYN  ++GLC+   +  A+ +   +R          Y+ LIDG CK  +L+ A 
Sbjct: 376 VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAM 435

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ Q++   G+  + VTY  +I G    G+   A  +  +M   G+ P+  T+  ++   
Sbjct: 436 EIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAF 495

Query: 241 IRNNETSKVVELLHRMDERN 260
            R  +    + LL  M  + 
Sbjct: 496 CRKGDVKTGLRLLKEMQNKG 515



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 87/175 (49%)

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             E+   Y ++L  G+ P    +N L   L  + ++  A  +FDEMQ   V     ++NT
Sbjct: 221 APEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 280

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G+C+ G +  A  L R +        +  Y  LI GLC++G++E A  +F+ +   G
Sbjct: 281 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 340

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + PN V + I+I   C  G  +   +L  +M  +GV P+ VT+N ++ G  R  +
Sbjct: 341 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARD 395



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RLL  M  +G +P    Y+ +++GFC  G++  A  L  +M   G   + +TYN L++G+
Sbjct: 506 RLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGH 565

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           CK   V +   L S   +KG  P +  Y ++
Sbjct: 566 CKHGKVTDIEELKS---AKGTVPDLGVYTSI 593


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A      M  +   P+ F YSTL++G C    +D A  L   M   GC+ N VT+N 
Sbjct: 214 IDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 273

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K  D+  +  L   M  KG  P  VTYNTL HGL    +++ AL L ++M  S 
Sbjct: 274 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 333

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY T I+GL K     +   +  ++     +     YS LI GL K GK E A 
Sbjct: 334 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 393

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +   G  PNVV Y   I G C D + D+A D+  +M +KG  PN  T+++LM G 
Sbjct: 394 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 453

Query: 241 IRNNETSKVVELLHRM 256
            +  ++ K + +   M
Sbjct: 454 FKKGDSQKAILVWKEM 469



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 145/293 (49%), Gaps = 37/293 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A++L+D M  +G  PN   Y+TLI G CL G++D+A  L   M  + C+ N VTY T
Sbjct: 284 LSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGT 343

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING  K +  E+ +++   M  +G +     Y++L  GLF+  + E+A++L+ EM    
Sbjct: 344 IINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 403

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-------------RVLK-------CELGI 160
                  Y  FIDGLC++    EA ++ + +              ++K        +  I
Sbjct: 404 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 463

Query: 161 EAY---------------SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
             +               S L++GLC+ G+L  A  ++  +   GL P+VV Y+ MI G 
Sbjct: 464 LVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 523

Query: 206 CNDGQMDKAHDLFLDMEAK--GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C+ G +DK   LF +M+ +     P+ VT+N L     R +  ++ ++LL+ M
Sbjct: 524 CDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD M   G  PN   ++ LID     G++ RA +L  +M + GC+ N VTYNT
Sbjct: 249 VDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT 308

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    ++++L+L  +M+S    P  VTY T+ +GL +  + E  + +   M+   
Sbjct: 309 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 368

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A    Y++ I GL K G    A  L++ +    C+  +  Y   IDGLC+  K + A 
Sbjct: 369 QKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAE 428

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ Q +   G +PN  TY+ ++ GF   G   KA  ++ +M ++ +  N V  + L+ G
Sbjct: 429 DILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNG 487



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 6/231 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +RG + N ++YS+LI G    G+ + A  L+  M   GC  NVV Y   I+G C+ + 
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +E+ ++  EMLSKG  P   TY++L  G F+    + A+ ++ EM   D+       + 
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL---- 186
            ++GLC++G + EA  ++  +     +  + AYS +I GLC +G ++   +LF  +    
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 543

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           P+    P+VVTYNI+ +  C    + +A DL   M  +G  P+ +T N  +
Sbjct: 544 PKS--RPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL 592



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 109/212 (51%), Gaps = 3/212 (1%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEML---SKGIRPTVVTYNTLFHGLFEIHQVE 107
           C   V ++N+++N   +  D   +   Y  +    SKG +P ++TYN +   L ++ Q++
Sbjct: 156 CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQID 215

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            A+  F EM   +   +  TY+T ++GLCK   + EA  L   ++   C      ++ LI
Sbjct: 216 RAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLI 275

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           D L K G L  A +L  ++   G +PN VTYN +IHG C  G++DKA  L   M +    
Sbjct: 276 DALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCV 335

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           PN VT+ T++ G ++       V +L  M+ER
Sbjct: 336 PNQVTYGTIINGLVKQRRAEDGVHILMSMEER 367



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 106/211 (50%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
            G   N++TYN +I   CK   ++ +++ + EM  K   P V TY+TL +GL +  +V+ 
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A+ L DEMQ         T+N  ID L KNG +  AA+L   + +  C      Y+ LI 
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 311

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC  GKL+ A  L + +     +PN VTY  +I+G     + +    + + ME +G   
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 371

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           N   +++L+ G  +  ++   V L   M E+
Sbjct: 372 NEYIYSSLISGLFKEGKSENAVRLWKEMAEK 402



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 40/201 (19%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  +L  M+ +G  PNAF YS+L+ GF   G+  +A  ++  M      HNVV  + L
Sbjct: 425 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 484

Query: 62  INGYCKTKDVEESLNLYSEMLSKGI----------------------------------- 86
           +NG C++  + E+L +++ ML +G+                                   
Sbjct: 485 LNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 544

Query: 87  --RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
             RP VVTYN LF+ L     +  A+ L + M       ++ T N F++ L +     + 
Sbjct: 545 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQD 604

Query: 145 AELF---RTLRVLKCELGIEA 162
             LF     +R+LK E  + A
Sbjct: 605 GRLFLDELVVRLLKRERKLSA 625



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 23/169 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN--GCMHNVVTY 58
           + EA  +   M+  G++P+   YS++I G C  G +D+  +LF  M         +VVTY
Sbjct: 494 LREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTY 553

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE-IHQVE---------- 107
           N L N  C+  ++  +++L + ML +G  P  +T N     L E I+  +          
Sbjct: 554 NILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELV 613

Query: 108 ----------HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
                      AL++ +EM    +  E ST++  I   CK   I E  +
Sbjct: 614 VRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 662


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 135/257 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  LL  M +  ++ +  +Y+ +ID  C  G    A+ LF  M   G   +V+TY+ +
Sbjct: 58  ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +C++    ++  L  +M+ + I P VVT++ L + L +  +V  A +++ +M    +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T TYN+ IDG CK   + +A  +  ++    C   +  +S LI+G CK  +++   E
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + R G++ N VTY  +IHGFC  G +D A DL   M + GVAPN +TF +++    
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 242 RNNETSKVVELLHRMDE 258
              E  K   +L  + +
Sbjct: 298 SKKELRKAFAILEDLQK 314



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 4/249 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G RP+   ++TL++G C  G + +A  L   M   G  H    Y T+ING CK  D
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG--HQ--PYGTIINGLCKMGD 56

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            E +LNL S+M    I+  VV YN +   L +     HA  LF EM    +  +  TY+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  C++G   +A +L R +   +    +  +S LI+ L K GK+  A E++  + R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P  +TYN MI GFC   +++ A  +   M +K  +P+ VTF+TL+ G  +       +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 251 ELLHRMDER 259
           E+   M  R
Sbjct: 237 EIFCEMHRR 245



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 112/228 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M  +G+ P+   YS +ID FC +G    A +L   M       +VVT++ LIN
Sbjct: 95  AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K   V E+  +Y +ML +GI PT +TYN++  G  +  ++  A ++ D M     + 
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T++T I+G CK   +    E+F  +           Y+ LI G C++G L+ A +L 
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             +   G+ PN +T+  M+   C+  ++ KA  +  D++   V P  V
Sbjct: 275 NVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 114/211 (54%), Gaps = 4/211 (1%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           GC  +VVT+ TL+NG C    V ++L L   M+ +G +P    Y T+ +GL ++   E A
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           L L  +M+ + + A    YN  ID LCK+G+ + A  LF  +        +  YS +ID 
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            C+ G+   A +L + +    + P+VVT++ +I+    +G++ +A +++ DM  +G+ P 
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +T+N+++ G  + +  +    +L  M  ++
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 83/152 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M++RG+ P    Y+++IDGFC    ++ A+ +  SM    C  +VVT++T
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK K V+  + ++ EM  +GI    VTY TL HG  ++  ++ A  L + M  S 
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           VA    T+ + +  LC    + +A  +   L+
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 71/121 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R+LD M  +   P+   +STLI+G+C    +D   E+F  M   G + N VTY T
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+  D++ + +L + M+S G+ P  +T+ ++   L    ++  A  + +++Q S+
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316

Query: 121 V 121
           V
Sbjct: 317 V 317


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 135/257 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  LL  M +  ++ +  +Y+ +ID  C  G    A+ LF  M   G   +V+TY+ +
Sbjct: 58  ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +C++    ++  L  +M+ + I P VVT++ L + L +  +V  A +++ +M    +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T TYN+ IDG CK   + +A  +  ++    C   +  +S LI+G CK  +++   E
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + R G++ N VTY  +IHGFC  G +D A DL   M + GVAPN +TF +++    
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 242 RNNETSKVVELLHRMDE 258
              E  K   +L  + +
Sbjct: 298 SKKELRKAFAILEDLQK 314



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 4/249 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G RP+   ++TL++G C  G + +A  L   M   G  H    Y T+ING CK  D
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG--HQ--PYGTIINGLCKMGD 56

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            E +LNL S+M    I+  VV YN +   L +     HA  LF EM    +  +  TY+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  C++G   +A +L R +   +    +  +S LI+ L K GK+  A E++  + R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P  +TYN MI GFC   +++ A  +   M +K  +P+ VTF+TL+ G  +       +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 251 ELLHRMDER 259
           E+   M  R
Sbjct: 237 EIFCEMHRR 245



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 114/211 (54%), Gaps = 4/211 (1%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           GC  +VVT+ TL+NG C    V ++L L   M+ +G +P    Y T+ +GL ++   E A
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           L L  +M+ + + A    YN  ID LCK+G+ + A  LF  +        +  YS +ID 
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            C+ G+   A +L + +    + P+VVT++ +I+    +G++ +A +++ DM  +G+ P 
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +T+N+++ G  + +  +    +L  M  ++
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 83/152 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M++RG+ P    Y+++IDGFC    ++ A+ +  SM    C  +VVT++T
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK K V+  + ++ EM  +GI    VTY TL HG  ++  ++ A  L + M  S 
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           VA    T+ + +  LC    + +A  +   L+
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 70/120 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R+LD M  +   P+   +STLI+G+C    +D   E+F  M   G + N VTY T
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+  D++ + +L + M+S G+ P  +T+ ++   L    ++  A  + +++Q S+
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 142/262 (54%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMI--QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           MDEA  LL+ MI  +  V PN   ++++I G C TG + +A ++   M  NGC  N+VT+
Sbjct: 304 MDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTF 363

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI G  +   V++++ L  EM S G+ P   TY+ L +G  ++ QV+ A  L  +M+ 
Sbjct: 364 NLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRR 423

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +  E   Y   +  LC+ G + +A   F  +    C+L + AYS +I G C++   ++
Sbjct: 424 DGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKS 482

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A E  + +   GL+P+ VTY+++I+ F N G +  A  +   M A G  P+   F++L+ 
Sbjct: 483 AEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIK 542

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G     +T KV+EL+  M  ++
Sbjct: 543 GYGAKGDTEKVLELIREMTAKD 564



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 132/293 (45%), Gaps = 38/293 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL +M     RP A  Y+TL+   C      +A  L   M  +G   +VVTY T
Sbjct: 95  LDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGT 153

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C   DV++++ L  EM   GI P VV Y+ L  G  +  + E   K+F+EM    
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRG 213

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   ID LC+ G + +A ++   +     E  +  Y+ LI+ +CK G ++ A 
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273

Query: 181 ELFQSLPRVGLM-------------------------------------PNVVTYNIMIH 203
            L  ++   G+                                      PNVVT+N +IH
Sbjct: 274 SLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIH 333

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           G C  G+M +A  +   M   G A N VTFN L+ G +R ++  K +EL+  M
Sbjct: 334 GLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEM 386



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 122/238 (51%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +A  Y+T++   C  G    A    + +  +      V+Y TL+   C  +   +++ L 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M + G+RP VVTY TL  GL +   V+ A++L  EM  S +      Y+  + G CK 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G     +++F  +     E  +  Y+ LID LC+ GK++ A ++   +   GL PNVVTY
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N++I+  C +G + +A  L  +M  KGVA + VT+NTL+ G     E  + + LL  M
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 8/213 (3%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           + + V+YNT++   C+     ++      +++   RPT V+Y TL   L    +   A+ 
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLI 167
           L  +MQ S V  +  TY T I GLC    + +A EL R +    CE GIE     YSCL+
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM----CESGIEPNVVVYSCLL 190

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            G CK G+ E   ++F+ +   G+ P+VV Y  +I   C +G++ KA  +   M  +G+ 
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           PN VT+N L+    +     + + L + M E+ 
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKG 283



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 1/138 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A    D M  +  + +   YST+I G C   +   A E    M   G + + VTY+ 
Sbjct: 446 MEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSM 504

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +  + D+  +  +  +M + G  P V  +++L  G       E  L+L  EM   D
Sbjct: 505 LINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKD 564

Query: 121 VAAETSTYNTFIDGLCKN 138
           +A ++   +T    L  N
Sbjct: 565 IALDSKIISTIYTCLVAN 582


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL + M   GV+P+ + YS LI+G C   ++D A  LF  M   G + N VT+ T
Sbjct: 187 LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 130/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G+++    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 127/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+ GF   GEI  A+ +F ++   G   +VV++NTL+NGY K  D+ E 
Sbjct: 131 GYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A  LFDEM    +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++G+ K  ++  + +++  +   G+RP+VV++NTL +G  ++  +    +L + MQ
Sbjct: 139 FNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A  LF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 117/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L HG  +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A  LF  +   GL+PN V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 131/255 (51%), Gaps = 1/255 (0%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RLL ++ + G+ PN  +Y+TLIDG C  G +  A+ LF  M+  G + N  TY+ L+NG+
Sbjct: 179 RLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGF 238

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            K     E   +Y  M   GI P    YN L         V+ A K+F EM+   +A   
Sbjct: 239 FKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGV 298

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN  I GLC+     EA +L   +  +     I  Y+ LI+G C + K+++A  LF  
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQ 358

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           L   GL P +VTYN +I G+     +  A DL  +ME + +AP+ VT+  L+    R N 
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNH 418

Query: 246 TSKVVELLHRMDERN 260
           T K  E +H + E++
Sbjct: 419 TEKACE-MHSLMEKS 432



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 139/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  ++ + M + G+ PNA+ Y+ LI  +C  G +D+A ++F  M   G    V+TYN LI
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+ K   E++ L  ++   G+ P +VTYN L +G  ++ +++ A++LF++++ S ++
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT I G  K   +  A +L + +           Y+ LID   ++   E A E+
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEM 425

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + GL+P+V TY++++HG C  G M +A  LF  +    + PN V +NT++ G  +
Sbjct: 426 HSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 243 NNETSKVVELLHRM 256
              + + + LL+ M
Sbjct: 486 EGSSYRALRLLNEM 499



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 135/253 (53%), Gaps = 1/253 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M ++G+      Y+ LI G C   +   A +L   ++  G   N+VTYN 
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C  + ++ ++ L++++ S G+ PT+VTYNTL  G  ++  +  AL L  EM+   
Sbjct: 339 LINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TY   ID   +  +  +A E+   +        +  YS L+ GLC  G ++ A 
Sbjct: 399 IAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEAS 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+SL  + L PN V YN MIHG+C +G   +A  L  +M   G+ PN  +F +  +G 
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCS-TIGL 517

Query: 241 IRNNETSKVVELL 253
           +  +E  K  ELL
Sbjct: 518 LCRDEKWKEAELL 530



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 131/241 (54%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +A+ +  +I G C  G   +   L   ++  G   NVV Y TLI+G CK  +V  + NL+
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLF 216

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            +M   G+ P   TY+ L +G F+        ++++ M+ S +      YN  I   C +
Sbjct: 217 CKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCND 276

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + +A ++F  +R      G+  Y+ LI GLC+  K   A +L   + +VGL PN+VTY
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           NI+I+GFC+  +MD A  LF  +++ G++P  VT+NTL+ G  +    +  ++L+  M+E
Sbjct: 337 NILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 259 R 259
           R
Sbjct: 397 R 397



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 120/227 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L+  + + G+ PN   Y+ LI+GFC   ++D A  LF  +  +G    +VTYNTLI
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLI 375

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GY K +++  +L+L  EM  + I P+ VTY  L      ++  E A ++   M+ S + 
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLV 435

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+  + GLC +G + EA++LF++L  +  +     Y+ +I G CK G    A  L
Sbjct: 436 PDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRL 495

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
              + + G++PNV ++   I   C D +  +A  L   M   G+ P+
Sbjct: 496 LNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542



 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 41/290 (14%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL-FVSMDINGCMHNVVTYNTLIN 63
           S +L+ ++  G+ P A    +LI    ++G I  +  L         C      Y+T++N
Sbjct: 42  SFILNHLLSSGMLPQA---QSLILRL-ISGRIPSSLMLQLTQAHFTPCSTYTPLYDTVVN 97

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            Y  +   +++L     M+ +G  P   T+N L   L   +  + A  +F+E++ S V  
Sbjct: 98  AYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK-SKVVL 156

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  ++   I G C+ GY V+   L   L        +  Y+ LIDG CK G +  A  LF
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLF 216

Query: 184 QSLPRVGLMPNVVTYNIMIHGF-----------------------------------CND 208
             + R+GL+PN  TY+++++GF                                   CND
Sbjct: 217 CKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCND 276

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G +DKA  +F +M  KG+A   +T+N L+ G  R  +  + V+L+H++++
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK 326



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 65/127 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  +  LM + G+ P+ + YS L+ G C+ G +  A +LF S+       N V YNT+
Sbjct: 420 EKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTM 479

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYCK      +L L +EM+  G+ P V ++ +    L    + + A  L  +M +S +
Sbjct: 480 IHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGL 539

Query: 122 AAETSTY 128
               S Y
Sbjct: 540 KPSVSLY 546



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 54/93 (58%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EAS+L   + +  ++PN+ +Y+T+I G+C  G   RA  L   M  +G + NV ++ +
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCS 513

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
            I   C+ +  +E+  L  +M++ G++P+V  Y
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL + M   GV+P+ + YS LI+G C   ++D A  LF  M   G + N VT+ T
Sbjct: 187 LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 130/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G+++    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 125/242 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++   G   +VV++NTL+NGY K  D+ E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A  LFDEM    +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 111/203 (54%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +   G+RP+VV++NTL +G  ++  +    +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A  LF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+  T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 116/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A  LF  +   GL+PN V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  153 bits (386), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 129/255 (50%), Gaps = 4/255 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  LL  M + G  P+A +Y T+I   C  G +  A  L   M + GC  +V T++ +
Sbjct: 192 DEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G C    V E+  L   M++KG  P V+TY  L  GL  + Q + A  +   +   +V
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNV 311

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 +NT I G    G + EA EL+ T+ +  C+     YS L+ GLCK+G++ +A  
Sbjct: 312 V----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR 367

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + + + G  PNVVTY I++H FC +G  D    L  +M AKG+  N   +N ++    
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427

Query: 242 RNNETSKVVELLHRM 256
           ++    + + L+  M
Sbjct: 428 KDGRMDEAMGLIQEM 442



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 133/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A RLL  M ++G  PN   Y+ ++  FC  G  D  R L   M   G   N   YN 
Sbjct: 362 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK   ++E++ L  EM S+G  P + +YNT+ + L    Q+E A  +F+ +    
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   TYNT I  L ++G   +A  L + + +  C L + +Y+ LI  +CK G ++ + 
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G+ PN V+YNI+I   C + ++  A +L   M  +G+AP+ VT+NTL+ G 
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 241 IRNNETSKVVELLHRMDERN 260
            +       + LL ++   N
Sbjct: 602 CKMGWMHAALNLLEKLHNEN 621



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 131/289 (45%), Gaps = 31/289 (10%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---------------------- 40
           EA+RL+D M+ +G  P    Y  L+ G C   + D AR                      
Sbjct: 263 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCL 322

Query: 41  ---------ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
                    EL+ +M + GC  +  TY+ L++G CK   +  ++ L  EM  KG  P VV
Sbjct: 323 AEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVV 382

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           TY  + H   +    +    L +EM    +   +  YN  I  LCK+G + EA  L + +
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
           R   C   I +Y+ +I  LC   ++E A  +F++L   G++ N +TYN +IH    DG+ 
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 502

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             A  L  +M   G + + V++N L+    ++    + + LL  M E+ 
Sbjct: 503 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 8/240 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+   LL+ M  +G+  N+  Y+ +I   C  G +D A  L   M   GC  ++ +YNT+
Sbjct: 398 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 457

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I   C  + +EE+ +++  +L +G+    +TYNT+ H L    + + A++L  EM     
Sbjct: 458 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 517

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE----AYSCLIDGLCKIGKLE 177
           + +  +YN  I  +CK+G +  +  L   +     E GI+    +Y+ LI  LCK  ++ 
Sbjct: 518 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEM----AEKGIKPNNVSYNILISELCKERRVR 573

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A EL + +   GL P++VTYN +I+G C  G M  A +L   +  + V P+ +T+N L+
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 1/228 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  L+  M  +G  P+   Y+T+I   C   +++ A  +F ++   G + N +TYNT
Sbjct: 432 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 491

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+   +    ++++ L  EM+  G    VV+YN L   + +   V+ +L L +EM    
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +YN  I  LCK   + +A EL + +        I  Y+ LI+GLCK+G +  A 
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
            L + L    + P+++TYNI+I   C    +D A  + L+     V P
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDA-AMLLNRAMAAVCP 658



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 82/158 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A RL   MI  G   +   Y+ LI   C  G +DR+  L   M   G   N V+YN L
Sbjct: 503 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 562

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK + V ++L L  +ML++G+ P +VTYNTL +GL ++  +  AL L +++ + +V
Sbjct: 563 ISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 622

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
             +  TYN  I   CK   + +AA L        C +G
Sbjct: 623 HPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVG 660



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 9/210 (4%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEH 108
           G   +  +YN +++   +     ++L LY  M+ +  + PT  T+      L  + + + 
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           AL L   M       +   Y T I  LC  G + EAA L   + ++ C   +  +  ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G+C +G++  A  L   +   G MP V+TY  ++ G C   Q D+A  +       G  P
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML------GRVP 307

Query: 229 --NCVTFNTLMLGCIRNNETSKVVELLHRM 256
             N V FNT++ GC+   + ++  EL   M
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETM 337



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 2/190 (1%)

Query: 73  ESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNT 130
            +L+L  ++  + G++P+  +YN +   L        AL L+  M H D V   T T+  
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
               LC+ G   EA  L R +    C      Y  +I  LC  G +  A  L   +  +G
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
              +V T++ ++ G C  G++ +A  L   M  KG  P  +T+  L+ G  R  +  +  
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 251 ELLHRMDERN 260
            +L R+ E N
Sbjct: 301 AMLGRVPELN 310


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 138/256 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++L++++  G+ P   +Y+TLI+G+C   ++  A  +F  M       + +TYN LI
Sbjct: 352 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK + V ++ +L  EM   G+ P+V T+NTL        Q+E    +  +MQ   + 
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           ++  ++ + +   CKNG I EA  +   +         + Y+ +ID   + G  E A+ L
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 531

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G+  ++VTYN+++ G C   Q+D+A +L   +  +G+ P+ V++NT++  C  
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591

Query: 243 NNETSKVVELLHRMDE 258
             +T K +ELL  M++
Sbjct: 592 KGDTDKALELLQEMNK 607



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 125/231 (54%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + + M  R +RP+   Y+ LI+G C    + +A +L + M+ +G   +V T+NTLI+ Y 
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               +E+   + S+M  KGI+  V+++ ++     +  ++  A+ + D+M + DVA    
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YN+ ID   ++G   +A  L   ++       I  Y+ L+ GLC+  +++ A EL  +L
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              GL P+VV+YN +I   CN G  DKA +L  +M   G+ P   T++TL+
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLV 621



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDE   L+D M    + P+ F YS L DG   TGE      LF      G M    T + 
Sbjct: 280 MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSI 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   V ++  +   ++  G+ PT V YNTL +G  ++  +  A  +F++M+   
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+GLCK   + +A +L   +     +  +E ++ LID     G+LE  +
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   + + G+  +V+++  ++  FC +G++ +A  +  DM  K VAPN   +N+++   
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 241 IRNNETSKVVELLHRM 256
           I + +T +   L+ +M
Sbjct: 520 IESGDTEQAFLLVEKM 535



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 131/243 (53%), Gaps = 4/243 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+AF Y+ +I G   +G+   A ++F  M   G + N +TYNT+I+G+ K  D+E    L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +ML  G +P +VTYN L  GL    +++    L DEM    +  +  TY+   DGL +
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            G       LF     LK  + + AY+C  L++GLCK GK+  A ++ + L   GL+P  
Sbjct: 312 TGESRTMLSLF--AESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 369

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           V YN +I+G+C    +  A  +F  M+++ + P+ +T+N L+ G  +    +K  +L+  
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 256 MDE 258
           M++
Sbjct: 430 MEK 432



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++ D M+  GV PN   Y+T+IDG    G+++    L   M  +G   N+VTYN L+
Sbjct: 212 DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLL 271

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   ++E+  L  EM S  + P   TY+ LF GL    +    L LF E     V 
Sbjct: 272 SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T +  ++GLCK+G + +A ++   L           Y+ LI+G C++  L  A+ +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +    + P+ +TYN +I+G C    + KA DL ++ME  GV P+  TFNTL+     
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451

Query: 243 NNETSKVVELLHRMDER 259
             +  K   +L  M ++
Sbjct: 452 AGQLEKCFTVLSDMQQK 468



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 128/257 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+  M + GV P+   ++TLID +   G++++   +   M   G   +V+++ +++
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 481

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +CK   + E++ +  +M+ K + P    YN++     E    E A  L ++M++S V+
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 541

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN  + GLC++  I EA EL  TLR       + +Y+ +I   C  G  + A EL
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q + + G+ P + TY+ ++    + G++     L+  M  K V P+   +  ++   +R
Sbjct: 602 LQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661

Query: 243 NNETSKVVELLHRMDER 259
               SKV  L   M E+
Sbjct: 662 CENDSKVASLKKEMSEK 678



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 128/251 (50%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RL D M+  G +PN   Y+ L+ G C  G +D  R L   M  +    +  TY+ L +G 
Sbjct: 250 RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 309

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            +T +    L+L++E L KG+     T + L +GL +  +V  A ++ + + H+ +   T
Sbjct: 310 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 369

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             YNT I+G C+   +  A  +F  ++          Y+ LI+GLCK+  +  A +L   
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + + G+ P+V T+N +I  +   GQ++K   +  DM+ KG+  + ++F +++    +N +
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 246 TSKVVELLHRM 256
             + V +L  M
Sbjct: 490 IPEAVAILDDM 500



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 16/239 (6%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN--GCMHNVVTYNTLINGYCK 67
           L++  G RP+ F ++ ++      G++D A  +   M  +      +  +YN +I G  +
Sbjct: 147 LLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWR 206

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           +    ++L ++ EM+  G+ P  +TYNT+  G  +   +E   +L D+M H        T
Sbjct: 207 SGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVT 266

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-------YSCLIDGLCKIGKLETAW 180
           YN  + GLC+ G + E        RVL  E+   +       YS L DGL + G+  T  
Sbjct: 267 YNVLLSGLCRAGRMDET-------RVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTML 319

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            LF    + G+M    T +I+++G C DG++ KA  +   +   G+ P  V +NTL+ G
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 378



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 102/221 (46%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M Q+G++ +   + +++  FC  G+I  A  +   M       N   YN++I+ Y 
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           ++ D E++  L  +M + G+  ++VTYN L  GL    Q++ A +L   +++  +  +  
Sbjct: 521 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I   C  G   +A EL + +        +  Y  L+  L   G++     L+Q +
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
               + P+   Y IM+  +       K   L  +M  KG+A
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIA 681


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 131/248 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +++ R+   M +RG+  + F Y+TLID  C  G+++ A  +  SM +     NVVTY+T+
Sbjct: 322 EDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTM 381

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K    EE++ LY +M   G+RP  V+YNTL     ++ + + AL    +M+   +
Sbjct: 382 IDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGL 441

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            A+  TYN  ID   K G   +AA LF  ++       +  YS LID   K G  + A  
Sbjct: 442 KADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATS 501

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F    R GL P+VV Y+ +I   C  G ++ A  L  +M   G+ PN VT+N+L+    
Sbjct: 502 IFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYG 561

Query: 242 RNNETSKV 249
           RN +   V
Sbjct: 562 RNGQVDNV 569



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 125/243 (51%), Gaps = 1/243 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK-DVEE 73
           G   N + YS ++  +  +G    A ++F +M   GC  N++TYNT+I+   K   D+++
Sbjct: 229 GFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKK 288

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L+++ EM  +G+ P  +T+N+L          E + ++F EMQ   +  +  TYNT ID
Sbjct: 289 ALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLID 348

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            +CK G +  AA +  ++R+      +  YS +IDG  K+G  E A  L+  +   G+ P
Sbjct: 349 AVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRP 408

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           + V+YN +I  +   G+ D A     DME  G+  + VT+N L+    +  +      L 
Sbjct: 409 DRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLF 468

Query: 254 HRM 256
            +M
Sbjct: 469 DKM 471



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 133/259 (51%), Gaps = 2/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI-DRARELFVSMDINGCMHNVVTYN 59
           + +A  + + M + GV P+   +++LI   C  G + + ++ +F  M   G   ++ TYN
Sbjct: 286 LKKALDIFEEMQKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYN 344

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TLI+  CK   +E + ++ S M  K I P VVTY+T+  G  ++   E A+ L+ +M+ S
Sbjct: 345 TLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKES 404

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V  +  +YNT ID   K G   +A    + +  +  +  +  Y+ LID   K GK + A
Sbjct: 405 GVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDA 464

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF  +   GL+PNV+TY+ +I  +   G    A  +F++ +  G+ P+ V +++L+  
Sbjct: 465 AGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDS 524

Query: 240 CIRNNETSKVVELLHRMDE 258
           C +       V LL  M +
Sbjct: 525 CCKCGLVEDAVVLLQEMTQ 543



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 3/237 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID--RARELFVSMDINGCMHNVVTYNT 60
           EA ++   M + G +PN   Y+T+ID  C  G +D  +A ++F  M   G   + +T+N+
Sbjct: 252 EALKVFQAMKKAGCKPNLITYNTIIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNS 310

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI    +    E+S  +++EM  +GI   + TYNTL   + +  Q+E A  +   M+  +
Sbjct: 311 LIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKN 370

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TY+T IDG  K G   EA  L+  ++         +Y+ LID   K+G+ + A 
Sbjct: 371 ISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 430

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              + + RVGL  +VVTYN +I  +   G+   A  LF  M+A+G+ PN +T++ L+
Sbjct: 431 TACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALI 487



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 127/233 (54%), Gaps = 5/233 (2%)

Query: 9   DLMIQRGVRPNAF--VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + M+Q+G   + +  + S +I      G+++ A ++F      G  +NV  Y+ +++ Y 
Sbjct: 186 EWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYG 245

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHSDVAAET 125
           ++    E+L ++  M   G +P ++TYNT+     +    ++ AL +F+EMQ   V  + 
Sbjct: 246 RSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDR 305

Query: 126 STYNTFIDGLCKNGYIVEAAE-LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
            T+N+ I  +C  G + E ++ +F  ++    E  I  Y+ LID +CK G++E A  +  
Sbjct: 306 ITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMS 364

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           S+    + PNVVTY+ MI G+   G  ++A  L+ DM+  GV P+ V++NTL+
Sbjct: 365 SMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLI 417



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 70  DVEESLNLYSEMLSKG-IRPTVVTYNT-LFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           + E +L  Y  M+ +G +R       + +   L  + +VE AL +F+  Q +        
Sbjct: 177 EWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYA 236

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG-KLETAWELFQSL 186
           Y+  +    ++G   EA ++F+ ++   C+  +  Y+ +ID   K G  L+ A ++F+ +
Sbjct: 237 YSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEM 296

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQM-DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
            + G+ P+ +T+N +I   C+ G + + +  +F +M+ +G+  +  T+NTL+    +  +
Sbjct: 297 QKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQ 355

Query: 246 TSKVVELLHRMDERN 260
                 ++  M  +N
Sbjct: 356 MELAASIMSSMRLKN 370



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 15/205 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  LL  M Q G++PN   Y++LID +   G++D       +M IN   + V   +T
Sbjct: 531 VEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPIN-VFNKVGDRST 589

Query: 61  LINGYCKTKDVEESLN----------LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
            I   CKT   +++ N          ++ EM   G++P VVT++ + +       ++ A 
Sbjct: 590 EI--ICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEAS 647

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
            L ++M+  D       +   + GL ++ + VEA  LF  +  +    G   Y+ L D L
Sbjct: 648 VLLEQMRFFDSWVYGIAHGLLM-GLREHVW-VEAQRLFDEIARMDYATGAAFYNALTDVL 705

Query: 171 CKIGKLETAWELFQSLPRVGLMPNV 195
              G+ + A E+  +  R  +  N 
Sbjct: 706 WHFGQRQGAQEVVVAAKRRQVWENA 730


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL + M   GV+P+ + YS LI+G C   ++D A  LF  M   G + N VT+ T
Sbjct: 187 LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 130/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G+++    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 125/242 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++   G   +VV++NTL+NGY K  D+ E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A  LFDEM    +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 111/203 (54%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +   G+RP+VV++NTL +G  ++  +    +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A  LF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+  T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 117/241 (48%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           +R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +   
Sbjct: 62  LRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVW 121

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
             Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G 
Sbjct: 122 GFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            K G + E   L   ++    +  +  YS LI+GLCK  K++ A  LF  +   GL+PN 
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VT+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 256 M 256
           M
Sbjct: 302 M 302


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 129/255 (50%), Gaps = 4/255 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  LL  M + G  P+A +Y T+I   C  G +  A  L   M + GC  +V T++ +
Sbjct: 176 DEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 235

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G C    V E+  L   M++KG  P V+TY  L  GL  + Q + A  +   +   +V
Sbjct: 236 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNV 295

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 +NT I G    G + EA EL+ T+ +  C+     YS L+ GLCK+G++ +A  
Sbjct: 296 V----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR 351

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + + + G  PNVVTY I++H FC +G  D    L  +M AKG+  N   +N ++    
Sbjct: 352 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 411

Query: 242 RNNETSKVVELLHRM 256
           ++    + + L+  M
Sbjct: 412 KDGRMDEAMGLIQEM 426



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 133/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A RLL  M ++G  PN   Y+ ++  FC  G  D  R L   M   G   N   YN 
Sbjct: 346 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 405

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK   ++E++ L  EM S+G  P + +YNT+ + L    Q+E A  +F+ +    
Sbjct: 406 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 465

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   TYNT I  L ++G   +A  L + + +  C L + +Y+ LI  +CK G ++ + 
Sbjct: 466 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 525

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G+ PN V+YNI+I   C + ++  A +L   M  +G+AP+ VT+NTL+ G 
Sbjct: 526 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 585

Query: 241 IRNNETSKVVELLHRMDERN 260
            +       + LL ++   N
Sbjct: 586 CKMGWMHAALNLLEKLHNEN 605



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 131/289 (45%), Gaps = 31/289 (10%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---------------------- 40
           EA+RL+D M+ +G  P    Y  L+ G C   + D AR                      
Sbjct: 247 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCL 306

Query: 41  ---------ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
                    EL+ +M + GC  +  TY+ L++G CK   +  ++ L  EM  KG  P VV
Sbjct: 307 AEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVV 366

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           TY  + H   +    +    L +EM    +   +  YN  I  LCK+G + EA  L + +
Sbjct: 367 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 426

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
           R   C   I +Y+ +I  LC   ++E A  +F++L   G++ N +TYN +IH    DG+ 
Sbjct: 427 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 486

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             A  L  +M   G + + V++N L+    ++    + + LL  M E+ 
Sbjct: 487 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 8/240 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+   LL+ M  +G+  N+  Y+ +I   C  G +D A  L   M   GC  ++ +YNT+
Sbjct: 382 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 441

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I   C  + +EE+ +++  +L +G+    +TYNT+ H L    + + A++L  EM     
Sbjct: 442 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 501

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE----AYSCLIDGLCKIGKLE 177
           + +  +YN  I  +CK+G +  +  L   +     E GI+    +Y+ LI  LCK  ++ 
Sbjct: 502 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEM----AEKGIKPNNVSYNILISELCKERRVR 557

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A EL + +   GL P++VTYN +I+G C  G M  A +L   +  + V P+ +T+N L+
Sbjct: 558 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 1/228 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  L+  M  +G  P+   Y+T+I   C   +++ A  +F ++   G + N +TYNT
Sbjct: 416 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 475

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+   +    ++++ L  EM+  G    VV+YN L   + +   V+ +L L +EM    
Sbjct: 476 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +YN  I  LCK   + +A EL + +        I  Y+ LI+GLCK+G +  A 
Sbjct: 536 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
            L + L    + P+++TYNI+I   C    +D A  + L+     V P
Sbjct: 596 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDA-AMLLNRAMAAVCP 642



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 31/235 (13%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           T+       C+    +E+L L   M   G  P  V Y T+ H L +   V  A  L +EM
Sbjct: 161 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 220

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI--- 173
                AA+ +T++  + G+C  G + EAA L   +    C  G+  Y  L+ GLC++   
Sbjct: 221 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 280

Query: 174 ----------------------------GKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                                       GKL  A EL++++   G  P+  TY+I++HG 
Sbjct: 281 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 340

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C  G++  A  L  +ME KG APN VT+  ++    +N        LL  M  + 
Sbjct: 341 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 395



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 82/158 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A RL   MI  G   +   Y+ LI   C  G +DR+  L   M   G   N V+YN L
Sbjct: 487 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 546

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK + V ++L L  +ML++G+ P +VTYNTL +GL ++  +  AL L +++ + +V
Sbjct: 547 ISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 606

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
             +  TYN  I   CK   + +AA L        C +G
Sbjct: 607 HPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVG 644



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 9/183 (4%)

Query: 77  LYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           LY  M+ +  + PT  T+      L  + + + AL L   M       +   Y T I  L
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C  G + EAA L   + ++ C   +  +  ++ G+C +G++  A  L   +   G MP V
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 264

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP--NCVTFNTLMLGCIRNNETSKVVELL 253
           +TY  ++ G C   Q D+A  +       G  P  N V FNT++ GC+   + ++  EL 
Sbjct: 265 MTYGFLLQGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELY 318

Query: 254 HRM 256
             M
Sbjct: 319 ETM 321



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 1/150 (0%)

Query: 112 LFDEMQHSD-VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           L+  M H D V   T T+      LC+ G   EA  L R +    C      Y  +I  L
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C  G +  A  L   +  +G   +V T++ ++ G C  G++ +A  L   M  KG  P  
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 264

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +T+  L+ G  R  +  +   +L R+ E N
Sbjct: 265 MTYGFLLQGLCRVRQADEARAMLGRVPELN 294


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 138/261 (52%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRP-NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA  +L  M + G  P NAF Y+ +I G    G    A E+F  M     + N +TYN
Sbjct: 176 LGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYN 235

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+I+G+ K  D+E   +L  +M+  G++P  +TYN L  GL    ++     L DEM   
Sbjct: 236 TMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 295

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLE 177
            +  +  TY+   DGL +NG       LF   + LK  + I  Y+C  L++GLCK GK+ 
Sbjct: 296 KMVPDGFTYSILFDGLSRNGDSKAMLSLFG--KSLKNGVTIGDYTCSILLNGLCKDGKVS 353

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+ QSL   GL+P  V YN +I+G+C  G+++ A   F  M+++ + P+ +T+N L+
Sbjct: 354 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 413

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G  +    +   +LL  M +
Sbjct: 414 NGLCKAERITNAQDLLMEMQD 434



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 130/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + D M +R V PN   Y+T+IDG    G+++    L   M  +G   N +TYN L+
Sbjct: 214 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLL 273

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+  L  EM S+ + P   TY+ LF GL      +  L LF +   + V 
Sbjct: 274 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVT 333

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T +  ++GLCK+G +  A E+ ++L           Y+ LI+G C+ G+LE A+  
Sbjct: 334 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 393

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +    + P+ +TYN +I+G C   ++  A DL ++M+  GV P   TFNTL+    R
Sbjct: 394 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 453

Query: 243 NNETSKVVELLHRMDE 258
             +  K   +L  M E
Sbjct: 454 TGQLEKCFIVLSEMQE 469



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 35/280 (12%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++ GV    +  S L++G C  G++  A E+  S+   G +   V YNTLINGYC+T ++
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E + + + +M S+ I+P  +TYN L +GL +  ++ +A  L  EMQ + V     T+NT 
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447

Query: 132 ID-----------------------------------GLCKNGYIVEAAELFRTLRVLKC 156
           ID                                     CKNG I EA  +   +     
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
               + Y+ +ID   + G  + A+ L + +   G+ P++VTYN++I G CN  Q+ +A +
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   +    + P+ V++NTL+  C       K ++L  RM
Sbjct: 568 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 607



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E S LLD M  + + P+ F YS L DG    G+      LF     NG      T + 
Sbjct: 282 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSI 341

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   V  +  +   +++ G+ PT V YNTL +G  +  ++E A   F +M+   
Sbjct: 342 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 401

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+GLCK   I  A +L   ++       +E ++ LID   + G+LE  +
Sbjct: 402 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 461

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   GL PNVV+Y  +++ FC +G++ +A  +  DM  K V PN   +N ++   
Sbjct: 462 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 521

Query: 241 IRNNETSKVVELLHRM 256
           + +    +   L+ +M
Sbjct: 522 VEHGPNDQAFILVEKM 537



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 117/229 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  R ++P+   Y+ LI+G C    I  A++L + M  NG    V T+NTLI+ Y +T  
Sbjct: 397 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 456

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E+   + SEM   G++P VV+Y ++ +   +  ++  A+ + D+M H DV      YN 
Sbjct: 457 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 516

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID   ++G   +A  L   ++       I  Y+ LI GLC   ++  A E+  SL    
Sbjct: 517 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 576

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L+P+ V+YN +I   C  G +DKA DL   M   G+     T++ L+ G
Sbjct: 577 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 625



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 112/234 (47%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M   GV P    ++TLID +  TG++++   +   M  NG   NVV+Y +++N
Sbjct: 425 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 484

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK   + E++ +  +M  K + P    YN +     E    + A  L ++M+ + ++ 
Sbjct: 485 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 544

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  I GLC    I EA E+  +L   +      +Y+ LI   C  G ++ A +L 
Sbjct: 545 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 604

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           Q + + G+   V TY+ +I G    G++ +   L+  M    V P+    N ++
Sbjct: 605 QRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMV 658



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 107/218 (49%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G++PN   Y ++++ FC  G+I  A  +   M     + N   YN +I+ Y 
Sbjct: 463 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 522

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +    +++  L  +M S GI P++VTYN L  GL    Q+  A ++ + + +  +  +  
Sbjct: 523 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 582

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I   C  G I +A +L + +     +  +  Y  LI GL   G+L     L+Q +
Sbjct: 583 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKM 642

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +  ++P+   +NIM+  +   G   KA DL  +M  K
Sbjct: 643 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 1/256 (0%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTLING 64
           R   ++   G RP+ F ++  +      G++  A  +   M  +G    N  +YN +I G
Sbjct: 146 RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAG 205

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
             +     +++ ++ EM  + + P  +TYNT+  G  +   +E    L D+M    +   
Sbjct: 206 MWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPN 265

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             TYN  + GLC+ G + E + L   +   K       YS L DGL + G  +    LF 
Sbjct: 266 AITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFG 325

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
              + G+     T +I+++G C DG++  A ++   +   G+ P  V +NTL+ G  +  
Sbjct: 326 KSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 385

Query: 245 ETSKVVELLHRMDERN 260
           E         +M  R+
Sbjct: 386 ELEGAFSTFGQMKSRH 401



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 74/151 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +LD M  + V PNA VY+ +ID +   G  D+A  L   M  NG   ++VTYN 
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 551

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C    + E+  + + + +  + P  V+YNTL         ++ AL L   M    
Sbjct: 552 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           + +   TY+  I GL   G ++E   L++ +
Sbjct: 612 IKSTVRTYHQLISGLGGAGRLIEMEYLYQKM 642



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 79/150 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L++ M   G+ P+   Y+ LI G C   +I  A E+  S+  +  + + V+YNTL
Sbjct: 528 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 587

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  C   +++++L+L   M   GI+ TV TY+ L  GL    ++     L+ +M  ++V
Sbjct: 588 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNV 647

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
               + +N  ++   K G  ++A +L + +
Sbjct: 648 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +++ +    + P+A  Y+TLI   C  G ID+A +L   M   G    V TY+ 
Sbjct: 562 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 621

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G      + E   LY +M+   + P+   +N +         VE   K  +E++  D
Sbjct: 622 LISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIM---------VEAYSKYGNEIKAED 672

Query: 121 VAAE 124
           +  E
Sbjct: 673 LRKE 676


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 128/238 (53%), Gaps = 1/238 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + D MI++G  P+A  Y T+I  F   G ++ A E+   M  +G   +   YN+L+
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-V 121
           +GY K + V+++  +Y  M++ GI+P  VT+N L HGLF+  + + A  LF EM   D V
Sbjct: 651 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEV 710

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                +Y   IDGL K G + EA   F+ +           Y+ LI  L K G++  A +
Sbjct: 711 PPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK 770

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L + + ++G+ P+V  Y+ +I G  +   +D A D+F +M  +G APN VT+  L  G
Sbjct: 771 LVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 828



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 132/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++ + M+Q+G  P+   Y+TLIDGF    ++D AR+L   M   G     VTY +
Sbjct: 449 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G+CK   + E+  + ++M  +G  P +  + +L        + E A ++  EM    
Sbjct: 509 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 568

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   Y + ID L   G + EA  +F ++    C      Y  +I    KIG +E A 
Sbjct: 569 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 628

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ + + + G+ P+   YN ++ G+    ++D+A  ++  M A G+ PN VTFN LM G 
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++ +T +   L   M E++
Sbjct: 689 FKDGKTDRAFSLFKEMLEKD 708



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 1/260 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA ++L  M  RG  P+  +Y++LID    TG +  AR +F SM   GC  + +TY T+
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I  + K  +VE +  +   M   G+ P    YN+L  G  ++ +V+ A  ++D M  S +
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRT-LRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                T+N  + GL K+G    A  LF+  L   +    + +Y+ LIDGL K G++  A+
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             FQ +   G++P   TY  +I+     G++ +A  L  DM   GV P+   ++ L+ G 
Sbjct: 735 SQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 794

Query: 241 IRNNETSKVVELLHRMDERN 260
           I ++      ++   M +R 
Sbjct: 795 IDSSMVDTAWDVFQEMMKRG 814



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 6/260 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L  L+   G +PNA  Y+T+I G      ++ A+  F          +V++Y T
Sbjct: 315 LDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA------LDVISYTT 368

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G   +K ++E+  L+ ++ + G  P VV Y  +  GL +  ++E  LK F++M  S 
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                +TY   IDGLCK   + +A ++F  +    C      Y+ LIDG  K  K++ A 
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G  P  VTY  ++HGFC    +++A ++   M  +G  P    F +L+   
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548

Query: 241 IRNNETSKVVELLHRMDERN 260
           +      +  ++L  M  R 
Sbjct: 549 LSKGRAEEAYQVLTEMTARG 568



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 1/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA +  + MI  G  P+   ++TLI GFC  G+  +   + ++  +     +V  Y +
Sbjct: 71  MDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRFRPDVFLYTS 129

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK  D++    +  EML+ G  P    Y  L   L ++ +V+ A +LF+ M+ S 
Sbjct: 130 VIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSG 189

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+ T I+ L  +G + EA EL+R +     E  +E    LI  LCK GK++ A 
Sbjct: 190 CLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEAN 249

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E++Q++    +  + V YN ++ G+C  G++D    L L M      P+  T+N L+ G 
Sbjct: 250 EIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGF 309

Query: 241 IRNNETSKVVELLH 254
            R N     +EL  
Sbjct: 310 SRANRLDDALELFK 323



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 1/233 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+  ++R  RP+ F+Y+++I G+C  G++D   ++   M   GC+ +   Y  LI+  C
Sbjct: 112 LLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLC 170

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   V+E+  L+  M   G     VT+ TL   L    +++ A +L+ EM          
Sbjct: 171 KLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLE 230

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
             ++ I  LCK G + EA E+++T+   K      AY+ L+DG CK+G+++   +L   +
Sbjct: 231 VQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM 290

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                 P++ TYNI++ GF    ++D A +LF  + + G  PN  T+ T++ G
Sbjct: 291 VECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQG 343



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 129/258 (50%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + +   G  PN   Y+ +IDG    G I+   + F  M  + C+    TY  
Sbjct: 379 IDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTV 438

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK + + ++  ++ +M+ KG  P  +TY TL  G  +  +++ A KL D M    
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 498

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY + + G CK   I EA E+   +R   CE G+  ++ L+      G+ E A+
Sbjct: 499 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 558

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM--L 238
           ++   +   G  P+V+ Y  +I    + G++ +A  +F  M  KG AP+ +T+ T++   
Sbjct: 559 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 618

Query: 239 GCIRNNETS-KVVELLHR 255
             I N E + +++EL+ +
Sbjct: 619 SKIGNVEAAGEILELMAK 636



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 1/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M   G  P    Y+T+I G     ++D A + F SM  NGC  +V+ + T
Sbjct: 36  IDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTT 95

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK    +    L ++ L K  RP V  Y ++ HG  +   ++   K+ +EM  + 
Sbjct: 96  LIHGFCKAGQPQVGHMLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAG 154

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + + Y   ID LCK G + EA ELF  +R   C      +  LI+ L   GKL+ A 
Sbjct: 155 CIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEAC 214

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL++ +   G  P +   + +I   C  G++D+A++++  + AK VA + V +N+LM G 
Sbjct: 215 ELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGY 274

Query: 241 IRNNETSKVVELLHRMDE 258
            +       ++LL +M E
Sbjct: 275 CKLGRVDDGLKLLLQMVE 292



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 1/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA   L  M   G+ P+    + +++G C   +ID+A ELF+ M   GC   +V+YNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G      ++E+   ++ M+  G  P V+ + TL HG  +  Q +    L ++     
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y + I G CK G +    ++   +    C     AY  LID LCK+G+++ A+
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF+ + + G + + VT+  +I    N G++D+A +L+ +M  +G  P     ++L+   
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 241 IRNNETSKVVELLH 254
            +  +  +  E+  
Sbjct: 240 CKAGKVDEANEIYQ 253



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 1/225 (0%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           ++ A +    M   G M +VV  N ++NG CK + +++++ L+ EM S G  PT+V+YNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           +  GL  I +++ A K F+ M  +    +   + T I G CK G   +   +     + +
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
               +  Y+ +I G CK G L+T +++ + +   G +P+   Y ++I   C  G++D+A+
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +LF  M   G   + VTF TL+     + +  +  EL   M ER 
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 6/237 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA    D  +      +   Y+T+I G   +  ID A ELF  +   GC  NVV Y  
Sbjct: 350 MEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTA 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K   +E+ L  + +M      PT  TY  +  GL +   +  A K+F++M    
Sbjct: 404 VIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T TY T IDG  K   + EA +L   +     E     Y  ++ G CK+  +  A 
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           E+   +   G  P +  +  ++  + + G+ ++A+ +  +M A+G AP+ + + +L+
Sbjct: 524 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLI 580



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 134/326 (41%), Gaps = 76/326 (23%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           +DEA  L + M + G   +   + TLI+     G++D A EL+  M              
Sbjct: 175 VDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDS 234

Query: 47  ------------DINGCMHNV---------VTYNTLINGYCKTKDVEESLNLYSEML--- 82
                       + N     V         V YN+L++GYCK   V++ L L  +M+   
Sbjct: 235 LIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECD 294

Query: 83  --------------------------------SKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
                                           S G +P   TY T+  GL++  ++E A 
Sbjct: 295 NFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAK 354

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
             FDE      A +  +Y T I GL  +  I EA ELF  L+   C   + AY+ +IDGL
Sbjct: 355 AFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGL 408

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K G++E   + F+ +     +P   TY ++I G C    +  A  +F  M  KG  P+ 
Sbjct: 409 LKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDT 468

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
           +T+ TL+ G  + ++  +  +LL  M
Sbjct: 469 ITYTTLIDGFSKASKMDEARKLLDVM 494


>gi|255660992|gb|ACU25665.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 376

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   + +LM + G   ++  Y  L+ GFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++++++++ + M+  G +P    YNTL +GL  + + E A+++F EM    
Sbjct: 135 MINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSKFEDAIRVFREMGTVH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L       G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V   NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L+ MI+ G +PNA VY+TL++G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSKFEDAIRVFREMGTVHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +    N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMLNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 131/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++  +L++  Q+G   +AF YS +I+G C    +D+A  +   M  +GC  N   YNT
Sbjct: 110 INKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LVNGLVGVSKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++  + LI GLC +GK++ A 
Sbjct: 230 LNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+   +++  V P+A VY+ +++G+    +I    EL+  M   G   +V ++N 
Sbjct: 6   IDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKG-NRSVSSFNI 64

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      V E ++++  M   G     +TY  L HG  +   +  +L + +  +   
Sbjct: 65  MMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEMAEQKG 124

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  I+GLCK   + +A  +   +    C+     Y+ L++GL  + K E A 
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSKFEDAI 184

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +  V   P ++TYN +I+G C +    +A++L  ++  KG+ P  +T++ LM G 
Sbjct: 185 RVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGL 244

Query: 241 IRNNETSKVVELLHRMDER 259
             +++  + ++L +++  +
Sbjct: 245 CLDHKVERALQLWNQVTSK 263



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 1/213 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M SKG R +V
Sbjct: 1   CESGDIDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V   + +++ M+ S    ++ TY   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK   L+ A  +   + + G  PN   YN +++G     +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            + A  +F +M     +P  +T+NTL+ G  +N
Sbjct: 180 FEDAIRVFREMGTVHCSPTIITYNTLINGLCKN 212


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 136/261 (52%), Gaps = 4/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R  + M++  V P+   YS  I+G     +ID A  +   M   G + N V YNT
Sbjct: 307 LDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNT 366

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++ E+L +  +MLSKGI P  VT N+L  G  +  Q+  A  + +EM    
Sbjct: 367 LIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG 426

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRT--LRVLKCELGIEAYSCLIDGLCKIGKLET 178
           +     +++  I+ LC     V A    R   LR L+   G+   + L+ GLCK GK   
Sbjct: 427 LPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGL--LTTLVSGLCKAGKQGE 484

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A EL+  L   G +PN+VT N +IHG C  G M +   L  DM  +G+  + +T+NTL+ 
Sbjct: 485 AVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLIS 544

Query: 239 GCIRNNETSKVVELLHRMDER 259
           GC +  +  +  EL   M ++
Sbjct: 545 GCCKEGKVKEGFELKEEMVKK 565



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 128/258 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   ++ +G  PN    + LI G C  G +    +L   M   G + + +TYNTLI
Sbjct: 484 EAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLI 543

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V+E   L  EM+ KGI+P + T+N L HGL    +++ A +L+ E + +   
Sbjct: 544 SGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYV 603

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDG CK   + E   L   L   K EL    Y+ LI   C  G +  A+ L
Sbjct: 604 PNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRL 663

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G++ +  TY+ ++HG CN G +D A  L  +M  +G+ PN V + T++ G  +
Sbjct: 664 RDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSK 723

Query: 243 NNETSKVVELLHRMDERN 260
             + +KV  +L  M   N
Sbjct: 724 LGQMNKVNIVLQEMSSHN 741



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 130/257 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E   L + M+++G++P+ + ++ L+ G C   +ID A  L+     NG + NV TY  
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGV 611

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK   VEE  NL +E++SK +    V YN+L         +  A +L D+M+   
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    +TY++ + GLC  G + +A  L   +R       +  Y+ +I G  K+G++    
Sbjct: 672 VLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVN 731

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + Q +    + PN  TY IMI GFC  G+  +A  L  +M  KG+ P+ VT+N    G 
Sbjct: 732 IVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGL 791

Query: 241 IRNNETSKVVELLHRMD 257
            +  +  +  ++   M 
Sbjct: 792 CKEGKVEEAFKVCDEMS 808



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 123/229 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ R +RPN  + +TL+ G C  G+   A EL+  +   G + N+VT N LI+G CK  +
Sbjct: 457 MLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGN 516

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E+L L  +ML +G+    +TYNTL  G  +  +V+   +L +EM    +  +  T+N 
Sbjct: 517 MQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNL 576

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            + GLC    I EA+ L+   +       +  Y  +IDG CK  K+E    L   L    
Sbjct: 577 LLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKK 636

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L  N V YN +I  +C +G M+ A  L  DM+++GV  +C T+++LM G
Sbjct: 637 LELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHG 685



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 122/240 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEASRL     + G  PN + Y  +IDG+C   +++    L   +       N V YN+
Sbjct: 587 IDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNS 646

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YC   ++  +  L  +M S+G+  +  TY++L HGL  I  V+ A  L DEM+   
Sbjct: 647 LIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEG 706

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y T I G  K G + +   + + +           Y+ +IDG CK+GK + A 
Sbjct: 707 LLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAA 766

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G++P+ VTYN   +G C +G++++A  +  +M +  V  + +T+ TL+ GC
Sbjct: 767 KLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGC 826



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 36/280 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-----DIN-GCMHN 54
           + EA ++ D M+ +G+ PN+   ++LI GFC + +I +A  +   M      IN G    
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436

Query: 55  VVTY-----------------------------NTLINGYCKTKDVEESLNLYSEMLSKG 85
           V+ +                              TL++G CK     E++ L+  +L KG
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P +VT N L HGL +   ++  LKL  +M    +  +  TYNT I G CK G + E  
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGF 556

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           EL   +     +  I  ++ L+ GLC   K++ A  L+    + G +PNV TY +MI G+
Sbjct: 557 ELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGY 616

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN 244
           C   ++++  +L  ++ +K +  N V +N+L+   CI  N
Sbjct: 617 CKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGN 656



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 122/258 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L   M + GV PN   Y+ +I G C +G +D A      M       +++TY+  
Sbjct: 273 DDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVF 332

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING  K + ++E+  +  EM   G  P  V YNTL  G  ++  +  ALK+ D+M    +
Sbjct: 333 INGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGI 392

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +  + T N+ I G CK+  I +A  +   +      +   ++S +I+ LC   +  TA  
Sbjct: 393 SPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALH 452

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             + +    L PN      ++ G C  G+  +A +L+  +  KG  PN VT N L+ G  
Sbjct: 453 FIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLC 512

Query: 242 RNNETSKVVELLHRMDER 259
           +     + ++LL  M ER
Sbjct: 513 KAGNMQETLKLLRDMLER 530



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 128/234 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ +  L+ ++G+ P+    + L+       E+ ++ E++  + + G + +V  ++T+IN
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK    ++++ L+S+M   G+ P VVTYN + HGL +  +++ A +  ++M    V+ 
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY+ FI+GL K   I EA  + + +  L        Y+ LIDG CK+G +  A ++ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   G+ PN VT N +I GFC   Q+ +A ++  +M  +G+  N  +F+ ++
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVI 438



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 117/221 (52%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A ++F  +   G   ++ T   L++   K  ++++S  +Y  +   GI P V  ++T+ +
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
              + H+ + A+ LF +M+   VA    TYN  I GLCK+G + EA      +   K   
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  YS  I+GL K+ K++ A  + + +  +G +PN V YN +I G+C  G + +A  + 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            DM +KG++PN VT N+L+ G  ++++  +   +L  M  R
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGR 425


>gi|356561399|ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 422

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 133/250 (53%), Gaps = 2/250 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A +LL ++  R    N  +Y+T+IDG C    ++ A +L+  MD+ G   NV+TY+T
Sbjct: 175 MRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYDLYSEMDVRGNFPNVITYHT 234

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    + E+  L  EM+ K I P V TYN L   L +  +  +AL L DE+    
Sbjct: 235 LICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDALCKEGK-SYALDLIDEIHRRR 293

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A+  TY + +DG CKN Y+ +A  LF+ ++  + +  +  +S L  G  K G+L+ A 
Sbjct: 294 QPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQPNVYTHSXLT-GCVKGGRLKNAQ 352

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E FQ L   G   +V TY +MI G C +G +D+A  +   ME  G  PN VTF  ++   
Sbjct: 353 EFFQHLLVKGYCIDVWTYTVMISGLCKEGMLDEALAMKXKMEDNGCIPNAVTFEIIICSL 412

Query: 241 IRNNETSKVV 250
              +E  K +
Sbjct: 413 FEKDENDKAL 422



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 1/246 (0%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G+ PN    + LI+ FC  G +  +  +   +   G   N +T  TLI G C   +V +
Sbjct: 83  KGIEPNLVTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRK 142

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           SL+ + +++++G +   V+  TL +GL +I ++  A+KL   ++          YNT ID
Sbjct: 143 SLHFHDKLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIID 202

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLCK+  + EA +L+  + V      +  Y  LI G C  G+L  A+ L + +    + P
Sbjct: 203 GLCKDKLVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDP 262

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +V TYNI++   C +G+   A DL  ++  +    + VT+ +L+ G  +N    K + L 
Sbjct: 263 DVYTYNILMDALCKEGK-SYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALF 321

Query: 254 HRMDER 259
            +M ER
Sbjct: 322 KKMKER 327



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 2/250 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  +++ G +PN    +TLI G CL  E+ ++      +   G   N V+  TL+NG C
Sbjct: 111 VLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGFQINHVSCGTLLNGLC 170

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K  ++  ++ L   +  +     VV YNT+  GL +   V  A  L+ EM          
Sbjct: 171 KIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYDLYSEMDVRGNFPNVI 230

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY+T I G C  G ++EA  L + + +   +  +  Y+ L+D LCK GK   A +L   +
Sbjct: 231 TYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDALCKEGK-SYALDLIDEI 289

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R     +VVTY  ++ G C +  +DKA  LF  M+ + + PN  T + L  GC++    
Sbjct: 290 HRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQPNVYTHSXLT-GCVKGGRL 348

Query: 247 SKVVELLHRM 256
               E    +
Sbjct: 349 KNAQEFFQHL 358



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 101/199 (50%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A  L   M++ G   N+VT N LIN +C    +  S ++  ++L  G +P  +T  TL  
Sbjct: 73  AISLSKQMEVKGIEPNLVTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIK 132

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           GL    +V  +L   D++          +  T ++GLCK G +  A +L R +       
Sbjct: 133 GLCLKDEVRKSLHFHDKLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTIT 192

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            +  Y+ +IDGLCK   +  A++L+  +   G  PNV+TY+ +I GFC  GQ+ +A  L 
Sbjct: 193 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLL 252

Query: 219 LDMEAKGVAPNCVTFNTLM 237
            +M  K + P+  T+N LM
Sbjct: 253 KEMILKNIDPDVYTYNILM 271



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 107/225 (47%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A   F  M +      ++ +N ++    K K    +++L  +M  KGI P +VT N 
Sbjct: 35  VDDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNI 94

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L +    +  +  +  +  ++        T T  T I GLC    + ++      L    
Sbjct: 95  LINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQG 154

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
            ++   +   L++GLCKIG++  A +L + +     + NVV YN +I G C D  +++A+
Sbjct: 155 FQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAY 214

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           DL+ +M+ +G  PN +T++TL+ G     +  +   LL  M  +N
Sbjct: 215 DLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKN 259


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 131/241 (54%), Gaps = 4/241 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEE 73
           G+ PN + Y T+I G+C  G +D A ++F  M   G      V YN LI GYC    ++ 
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L     M+ +G+  TV TYN L H LF   +   A +L +EM    +A +  TYN  I+
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G CK G + +A E+F  +        +  Y+ LI  L K G+++   +LF    R G+ P
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI--RNNETSKVV 250
           ++V YN +I+     G +D+A ++  +ME K +AP+ VT+NTLM G C+  R +E  K++
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455

Query: 251 E 251
           +
Sbjct: 456 D 456



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEID---------------------- 37
           +DEA ++ D M+ +G V+P A +Y+ LI G+C  G++D                      
Sbjct: 237 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 296

Query: 38  -------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
                         A EL   M   G   +V TYN LING+CK  +V+++L ++  M  +
Sbjct: 297 LLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRR 356

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+R TVVTY +L + L +  QV+   KLFDE     +  +   YN  I+    +G I  A
Sbjct: 357 GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 416

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E+   +   +       Y+ L+ GLC +G+++ A +L   + + G+ P++VTYN +I G
Sbjct: 417 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 476

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +   G +  A  +  +M  KG  P  +T+N L+ G  +N +      ++  M E
Sbjct: 477 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 530



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 127/245 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L++ M  +G+  + F Y+ LI+G C  G + +A E+F +M   G    VVTY +LI
Sbjct: 310 EAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLI 369

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               K   V+E+  L+ E + +GIRP +V YN L +       ++ A ++  EM+   +A
Sbjct: 370 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 429

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT + GLC  G + EA +L   +     +  +  Y+ LI G    G ++ A  +
Sbjct: 430 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRI 489

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P ++TYN +I G C +GQ D A ++  +M   G+ P+  T+ +L+ G   
Sbjct: 490 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 549

Query: 243 NNETS 247
            +E +
Sbjct: 550 EDERA 554



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 122/234 (52%), Gaps = 8/234 (3%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           ++ ++   C  G+  RA EL   M       N VTYNT+I G+C    V+ +L++  EM 
Sbjct: 157 FNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 212

Query: 83  SK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGY 140
            + GI P   TY T+  G  ++ +V+ A+K+FDEM    +V  E   YN  I G C  G 
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272

Query: 141 IVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
           + + A L+R   V +   + +  Y+ L+  L   G+   A+EL + +   GL  +V TYN
Sbjct: 273 L-DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           I+I+G C +G + KA ++F +M  +GV    VT+ +L+    +  +  +  +L 
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 385



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 82/135 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  ++  M ++ + P+   Y+TL+ G CL G +D AR+L   M   G   ++VTYNT
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY    DV+++L + +EM++KG  PT++TYN L  GL +  Q + A  +  EM  + 
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 532

Query: 121 VAAETSTYNTFIDGL 135
           +  + STY + I+GL
Sbjct: 533 ITPDDSTYISLIEGL 547



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+      +    SL LYS M S  +  +  +     H L        A  LF +M  
Sbjct: 92  NLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS----LHPLLSALPSAPAFALFADMFR 147

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +   T+T+N  +  LC  G    A EL R +           Y+ +I G C  G+++ 
Sbjct: 148 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQA 203

Query: 179 AWELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTL 236
           A ++ + +  R G+ PN  TY  +I G+C  G++D+A  +F +M  KG V P  V +N L
Sbjct: 204 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 263

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G     +    +    RM ER
Sbjct: 264 IGGYCDQGKLDTALLYRDRMVER 286


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 130/232 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +L + M   GV+P+ + YS LI+G C   +++ A +LF  M   G + N VT+ T
Sbjct: 187 LDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++  Y +MLS+   P ++TYNTL +GL +   ++ A  L DEM+   
Sbjct: 247 LIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A EL  T+      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++I+ FC    +  A  L  +M+ +G  P  VT
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 141/256 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D+  +L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   + E+ +L++EML KG+ P  VT+ TL  G  +  +V+ A++ + +M       
Sbjct: 215 GLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   +R+   +     Y+ LIDG CK G L++A+EL 
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +++ +  +  + V Y  +I G C +G+   A  +  +M + G+ P+  T+  ++    + 
Sbjct: 335 ETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394

Query: 244 NETSKVVELLHRMDER 259
            +     +LL  M  +
Sbjct: 395 EDVKTAAKLLKEMQRQ 410



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 134/247 (54%), Gaps = 2/247 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  GEI  A+ +F S+   G   +VV++NTL+NGY +  D
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGD 186

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +++   L + M + G++P V TY+ L +GL +  ++  A  LF+EM    +     T+ T
Sbjct: 187 LDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTT 246

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCEL-GIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
            IDG CKNG +  A E ++ + + +C L  +  Y+ LI GLCK G L+ A +L   +   
Sbjct: 247 LIDGHCKNGKVDSAMETYKQM-LSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMK 305

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           GL P+ +TY  +I G C +G +D A +L   M  + +  + V +  L+ G  +    +  
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDA 365

Query: 250 VELLHRM 256
            ++L  M
Sbjct: 366 EKMLREM 372



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 124/257 (48%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS +   +++ +G  R + +V+S LI+ +  +G +  A E F     +       T  
Sbjct: 46  DSASAVFAAILETKGTQRSDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++    K K  +     Y E+L  G   ++  +N L H   +  ++  A  +FD +   
Sbjct: 106 KVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKW 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT ++G  + G + +  +L   +     +  +  YS LI+GLCK  K+  A
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LF  +   GL+PN VT+  +I G C +G++D A + +  M ++   P+ +T+NTL+ G
Sbjct: 226 NDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRM 256
             +  +  +  +LL  M
Sbjct: 286 LCKKGDLKQAQDLLDEM 302


>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 395

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 131/238 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L   M + G  P+ F Y  ++D    +  I+   ++   M   G     VTYNT
Sbjct: 85  IDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNT 144

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K+K ++E++NLY +++S+G  PT  TY  L  GL +   +E A  LFDEM    
Sbjct: 145 IISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECG 204

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                + YN  ++G    G   +  ELF ++        I++Y+ +ID LC  G+L    
Sbjct: 205 CEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGL 264

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             F+ L  +GL P+++TYN++IHG    G++++A  L+ DME KG+APN  T+N+L+L
Sbjct: 265 SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 322



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 107/236 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   ++  G  P    Y  L+DG    G I+ A  LF  M   GC  N   YN 
Sbjct: 155 LDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNI 214

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGY    D E+   L+  M+ +G+ P + +Y  +   L    ++   L  F ++    
Sbjct: 215 LLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 274

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I GL K+G + EA  L+  +        +  Y+ LI  L K GK   A 
Sbjct: 275 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAG 334

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           ++++ L   G  PNV TYN +I G+   G  + A   +  M   G  PN  T+  L
Sbjct: 335 KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 390



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 99/214 (46%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           S +I   C   E   A EL    +  G      +YN LI G      ++ +  L+SEM  
Sbjct: 38  SPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKR 97

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G  P   TY+ +   + +  ++E  LK+ +EM +    +   TYNT I GL K+  + E
Sbjct: 98  LGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDE 157

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A  L+  L           Y  L+DGL K G +E A  LF  +   G  PN   YNI+++
Sbjct: 158 AINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLN 217

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           G+   G  +K  +LF  M  +G+ P+  ++  ++
Sbjct: 218 GYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVI 251



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 107/235 (45%)

Query: 25  TLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
           +L++G       +++ E   ++  +G + + +  + +I   CK K+   +  L  +  + 
Sbjct: 4   SLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENL 63

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+     +YN L  GL +   ++ A +LF EM+      +  TY+  +D + K+  I + 
Sbjct: 64  GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 123

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            ++   +     +     Y+ +I GL K   L+ A  L+  L   G  P   TY  ++ G
Sbjct: 124 LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 183

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              DG ++ A  LF +M   G  PNC  +N L+ G     +T KV EL   M E+
Sbjct: 184 LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQ 238



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++ + ++ +G +PN F Y+ LI G+ ++G  + A   +  M + GC  N  TY  L 
Sbjct: 332 EAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLP 391

Query: 63  N 63
           N
Sbjct: 392 N 392


>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
 gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           virgata]
          Length = 418

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 128/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A  LF  M   G + N VT+ T
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK + V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++I+ FC  G +     L  +M+  G  P+ V+
Sbjct: 367 KVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 131/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + + + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P+  T+  ++
Sbjct: 335 KRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMII 388



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 111/203 (54%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  +  +++ +   G+RP+VV++NTL +G   +  ++   +L   M 
Sbjct: 139 FNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A  LF  +           ++ LI G CK  +++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +AHDL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 319 DGCCKEGDLETAFEHRKRMIQEN 341



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 125/242 (51%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV++NTL+NGY +  D++E 
Sbjct: 131 GYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L S M + G++P V TY+ L +GL +  +++ A  LFDEM    +     T+ T I G
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKN  +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +        ++L 
Sbjct: 311 KITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372


>gi|224082750|ref|XP_002306825.1| predicted protein [Populus trichocarpa]
 gi|222856274|gb|EEE93821.1| predicted protein [Populus trichocarpa]
          Length = 205

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 14/190 (7%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           + + +T NTLIN +C  K   + L ++     +G RP  VT++++  GL    ++  A+ 
Sbjct: 7   LTDFITLNTLINCFCDVKRASDGLLVFG----RGFRPNAVTFSSMIKGLCVDDKIGEAVG 62

Query: 112 LFDEM----------QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           LF +M          +  D+    +TYN ++DGLCKN    EA  LF +L   K E  IE
Sbjct: 63  LFKKMGLFGCWPDVLRLHDLVPNVTTYNVYLDGLCKNNCFSEAVSLFHSLENCKFESSIE 122

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             +CLI+ LCKIGKL TAW+LF  +P  GL P VVTY IMIHG C +GQM++A DL +++
Sbjct: 123 ILNCLINCLCKIGKLATAWDLFYRMPNKGLKPAVVTYAIMIHGLCTEGQMERAKDLLVEL 182

Query: 222 EAKGVAPNCV 231
           E K   PN V
Sbjct: 183 EDKSCTPNVV 192



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 25/187 (13%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           L+  RG RPNA  +S++I G C+  +I  A  LF  M + GC  +V+  + L+       
Sbjct: 31  LVFGRGFRPNAVTFSSMIKGLCVDDKIGEAVGLFKKMGLFGCWPDVLRLHDLV------- 83

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
                             P V TYN    GL + +    A+ LF  +++    +     N
Sbjct: 84  ------------------PNVTTYNVYLDGLCKNNCFSEAVSLFHSLENCKFESSIEILN 125

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I+ LCK G +  A +LF  +     +  +  Y+ +I GLC  G++E A +L   L   
Sbjct: 126 CLINCLCKIGKLATAWDLFYRMPNKGLKPAVVTYAIMIHGLCTEGQMERAKDLLVELEDK 185

Query: 190 GLMPNVV 196
              PNVV
Sbjct: 186 SCTPNVV 192


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL + M   GV+P+ + YS LI+G C   ++D A  LF  M   G + N VT+ T
Sbjct: 187 LNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P + TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 130/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G+++    L  +M  +G   +V TY+ LIN
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 215 GLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G LETA+E  
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 126/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  F   GEI  A+ +F ++   G   +VV++NTL+NGY K  D+ E 
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G++P V TY+ L +GL +  +++ A  LFDEM    +     T+ T IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   GL P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +    M  + +  + V +  L+ G  +   +    ++L 
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ + K  ++  + +++  +   G+RP+VV++NTL +G  ++  +    +L + MQ
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A  LF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN +I+G C  G + +A DL  +M  KG+ P+ +T+ TL+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     E   RM + N
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKEN 341



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 116/240 (48%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 63  RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G  
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G + E   L   ++    +  +  YS LI+GLCK  K++ A  LF  +   GL+PN V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ ++P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 142/311 (45%), Gaps = 51/311 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L + M    V P+ F Y+ LID FC  G + +AR+ F  M  +GC  NVVTY  
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HS 119
           LI+ Y K + +  +  L+  MLS+G  P VVTY  L  G  +  Q+E A +++  M+ ++
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 120 DVA---------------AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           D+                    TY   +DGLCK   + EA +L   + V  CE     Y 
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI------------------------ 200
            LIDG CK+GKL+ A  +F  +   G  PNV TY+                         
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735

Query: 201 -----------MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
                      MI G C  G+ D+A+ L   ME KG  PN VT+  ++ G  +  +  K 
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795

Query: 250 VELLHRMDERN 260
           +EL+ +M  + 
Sbjct: 796 LELMRQMGAKG 806



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH------- 53
           M  A+ L ++M+  G  PN   Y+ LIDG C +G+I++A +++  M  N  +        
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 54  ---------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
                    N+ TY  L++G CK   V+E+ +L   M  +G  P  + Y+ L  G  ++ 
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +++ A  +F +M          TY++ ID L K+  +  A ++   +    C   +  Y+
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +IDGLCK+GK + A+ L   +   G  PNVVTY  MI GF   G++DK  +L   M AK
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G APN VT+  L+  C          +LL  M +
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 136/275 (49%), Gaps = 16/275 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  ++  M+ +G  P+   YS +I   C   ++D A  LF  M  N  + +V TY  L
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   ++++   + EM+  G  P VVTY  L H   +  ++  A +LF+ M     
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLR----------VLKCELG------IEAYSC 165
                TY   IDG CK+G I +A +++  +R            K + G      I  Y  
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGA 641

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DGLCK  K++ A +L   +   G  PN + Y+ +I GFC  G++D+A  +F  M  +G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             PN  T+++L+    ++      +++L RM E +
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 6/262 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +    R+L +MI  G  P+  ++++LI  +C +G+   A +L   M   GC    V YN 
Sbjct: 350 LGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNI 409

Query: 61  LINGYCKTKDV------EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           LI G C  + +      E +   Y EML   +    V  + L   L    + E A  +  
Sbjct: 410 LIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           EM       +TSTY+  I  LC    +  A  LF  ++       +  Y+ LID  CK+G
Sbjct: 470 EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            L+ A + F  + R G  PNVVTY  +IH +    +M  A++LF  M ++G  PN VT+ 
Sbjct: 530 LLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYT 589

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
            L+ G  ++ +  K  ++  RM
Sbjct: 590 ALIDGHCKSGQIEKACQIYARM 611



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 4/248 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++L  M++    PN  +Y+ +IDG C  G+ D A  L   M+  GC  NVVTY  
Sbjct: 722 LDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTA 781

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+ K   V++ L L  +M +KG  P  VTY  L +       ++ A +L DEM+ + 
Sbjct: 782 MIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTY 841

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                + Y   I+G  +  +I+    L      +   + I AY  LID  CK G+LE A 
Sbjct: 842 WPKHMAGYRKVIEGFNRE-FIISLGLLDEIAENVAVPI-IPAYRILIDSFCKAGRLELAL 899

Query: 181 ELFQSLPRVGLMPNVVT--YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           EL + +             Y+ +I       ++DKA +L+ DM  +G  P    F  L+ 
Sbjct: 900 ELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVK 959

Query: 239 GCIRNNET 246
           G IR N T
Sbjct: 960 GLIRINRT 967



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 16/266 (6%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+   V  N    S L    C  G+ ++A  +   M   G + +  TY+ +I   C    
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+ +  L+ EM S  + P V TY  L     ++  ++ A K FDEM     A    TY  
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF------Q 184
            I    K   +  A ELF  +    C   +  Y+ LIDG CK G++E A +++       
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 185 SLPRVGLM----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            +P V +           PN+ TY  ++ G C   ++ +A DL   M  +G  PN + ++
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+ G  +  +  +   +  +M ER 
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERG 701



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 100/268 (37%), Gaps = 44/268 (16%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   G   + +     +   C  G   R RE    ++      + V Y  +I+G C+   
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEASL 314

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            EE+++  S M S    P VVTY  L  G     Q+    ++   M           +N+
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG--------------------- 169
            I   C++G    A +L + +    C+ G   Y+ LI G                     
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 170 --------------------LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
                               LC  GK E A+ + + +   G +P+  TY+ +I   CN  
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++D A  LF +M++  V P+  T+  L+
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILI 522



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 3/200 (1%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI   C+      +L     +   G +P+ +TYN L     E  +++ A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S    +  T   F+  LCK G   EA  L         +L    Y+ +I GLC+    E 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEE 317

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +    +     +PNVVTY I++ G     Q+ +   +   M  +G  P+   FN+L+ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 239 GCIRNNETSKVVELLHRMDE 258
              R+ + S   +LL +M +
Sbjct: 378 AYCRSGDYSYAYKLLKKMGD 397


>gi|255660988|gb|ACU25663.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 376

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++ + + M+  G +P    YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA  L + L       G+  YS L  GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGLCLDHKVEKAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  N   YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+    GLC +  + +A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 128/259 (49%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+ + +++  V P+A VY+ +++G+    +I    EL+  M   G   +V ++N 
Sbjct: 6   IDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREG-NRSVSSFNI 64

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      VEE + ++  M   G     +TY  L HG  +   ++ +L + +  +   
Sbjct: 65  MMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  I+GLCK   +  A  +   +    C+     Y+ LI+GL    K E A 
Sbjct: 125 GVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAI 184

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +  +   P ++TYN +I+G C +    +A++L  ++  KG+ P  +T++ L  G 
Sbjct: 185 RVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGL 244

Query: 241 IRNNETSKVVELLHRMDER 259
             +++  K ++L +++  +
Sbjct: 245 CLDHKVEKALQLWNQVTSK 263



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 1/213 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M  +G R +V
Sbjct: 1   CESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +VE  + +++ M+ S    ++ TY   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  +   AYS +I+GLCK   L+ A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            + A  +F +M     +P  +T+NTL+ G  +N
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKN 212


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +LLD M+ RG++P+ F Y+T+I G C  G +DRA E+  ++++ GC  +V++YN 
Sbjct: 240 VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNI 299

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+         EE   L ++M S+   P VVTY+ L   L    ++E A+ L   M+   
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y+  I   C+ G +  A E   T+    C   I  Y+ ++  LCK GK + A 
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  L  VG  PN  +YN M     + G   +A  + L+M + G+ P+ +T+N+++   
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479

Query: 241 IRNNETSKVVELLHRM 256
            R     K  ELL  M
Sbjct: 480 CREGMVDKAFELLVDM 495



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 132/254 (51%), Gaps = 1/254 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R+++++ + G +P+ F Y+ LI+GFC    ID A  +   M       + VTYN +I
Sbjct: 138 KAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 196

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C    ++ +L +  ++LS   +PTV+TY  L         V+ ALKL DEM    + 
Sbjct: 197 GSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLK 256

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT I G+CK G +  A E+ R L +  CE  + +Y+ L+  L   GK E   +L
Sbjct: 257 PDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 316

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +      PNVVTY+I+I   C DG++++A +L   M+ KG+ P+  +++ L+    R
Sbjct: 317 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 376

Query: 243 NNETSKVVELLHRM 256
                  +E L  M
Sbjct: 377 EGRLDVAIEFLETM 390



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 134/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+R+LD M  +   P+   Y+ +I   C  G++D A ++   +  + C   V+TY  
Sbjct: 170 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTI 229

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI        V+E+L L  EMLS+G++P + TYNT+  G+ +   V+ A ++   ++   
Sbjct: 230 LIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKG 289

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YN  +  L   G   E  +L   +   KC+  +  YS LI  LC+ GK+E A 
Sbjct: 290 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 349

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   GL P+  +Y+ +I  FC +G++D A +    M + G  P+ V +NT++   
Sbjct: 350 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 409

Query: 241 IRNNETSKVVELLHRMDE 258
            +N +  + +E+  ++ E
Sbjct: 410 CKNGKADQALEIFGKLGE 427



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 117/221 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL LM ++G+ P+A+ Y  LI  FC  G +D A E   +M  +GC+ ++V YNT
Sbjct: 345 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 404

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK    +++L ++ ++   G  P   +YNT+F  L+       AL +  EM  + 
Sbjct: 405 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNG 464

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ I  LC+ G + +A EL   +R  +    +  Y+ ++ G CK  ++E A 
Sbjct: 465 IDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 524

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           ++  S+   G  PN  TY ++I G    G   +A +L  D+
Sbjct: 525 DVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 131/257 (50%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+  LL+ M+++G  P+  + + LI GF     + +A  +   ++  G   +V  YN LI
Sbjct: 103 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALI 161

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK   ++++  +   M SK   P  VTYN +   L    +++ ALK+ D++   +  
Sbjct: 162 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQ 221

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I+     G + EA +L   +     +  +  Y+ +I G+CK G ++ A+E+
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 281

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            ++L   G  P+V++YNI++    N G+ ++   L   M ++   PN VT++ L+    R
Sbjct: 282 IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341

Query: 243 NNETSKVVELLHRMDER 259
           + +  + + LL  M E+
Sbjct: 342 DGKIEEAMNLLKLMKEK 358



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 7/195 (3%)

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK---LFDEMQHSDVA 122
           C++ +  ESL+L   M+ KG  P V+    L  G F +  V  A++   + ++    DV 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVF 155

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A    YN  I+G CK   I +A  +   +R          Y+ +I  LC  GKL+ A ++
Sbjct: 156 A----YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L      P V+TY I+I     +G +D+A  L  +M ++G+ P+  T+NT++ G  +
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 243 NNETSKVVELLHRMD 257
                +  E++  ++
Sbjct: 272 EGMVDRAFEMIRNLE 286



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 2/117 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+ P+   Y+++I   C  G +D+A EL V M       +VVTYN ++ G+CK   
Sbjct: 460 MVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 519

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGL-FEIHQVEHALKLFDEMQHSDVAAETS 126
           +E+++++   M+  G RP   TY  L  G+ F  ++ E A++L +++   +  +E S
Sbjct: 520 IEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELANDLVRINAISEYS 575


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL  +M +  V P+ F YS LIDG C   +++ A  LF  M   G + N VT+ T
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   V+ +L +Y +M +KG++  +V YNTL  GL +      A K   EM    
Sbjct: 343 LINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRG 402

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T +DG CK G +  A E+ + +     +L   A++ +I GLC+ GK+  A 
Sbjct: 403 LIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAE 462

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + + R GL P+  TY +++ GFC  G +     L  +M++ G  P  +T+N LM G 
Sbjct: 463 RTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGL 522

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL+ M
Sbjct: 523 CKQGQVKNADMLLNAM 538



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 133/242 (54%), Gaps = 6/242 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A+ L   M  RG+ PN   ++TLI+G C  G +D A E++  M   G   ++V YNT
Sbjct: 318 LEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNT 377

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK     E+     EM  +G+ P   TY TL  G  +   +E AL++  EM    
Sbjct: 378 LIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG 437

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-VLKCELGIE--AYSCLIDGLCKIGKLE 177
           +  +   +   I GLC++G IV+A    RTLR +L+  L  +   Y+ ++DG CK G ++
Sbjct: 438 IQLDNVAFTAIISGLCRDGKIVDAE---RTLREMLRAGLKPDDGTYTMVMDGFCKKGDVK 494

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             ++L + +   G +P V+TYN++++G C  GQ+  A  L   M   GV P+ +T+N L+
Sbjct: 495 MGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILL 554

Query: 238 LG 239
            G
Sbjct: 555 QG 556



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 126/246 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G  PN + ++ L++  C  G++  A+ +F  +   G     V++NTLINGYCK+ +
Sbjct: 223 ILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN 282

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +EE   L   M    + P V TY+ L  GL +  Q+E A  LF EM    +     T+ T
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+G CKNG +  A E+++ +     +  +  Y+ LIDGLCK G    A +    + + G
Sbjct: 343 LINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRG 402

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L+P+  TY  ++ G C +G ++ A ++  +M  +G+  + V F  ++ G  R+ +     
Sbjct: 403 LIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAE 462

Query: 251 ELLHRM 256
             L  M
Sbjct: 463 RTLREM 468



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 130/263 (49%), Gaps = 14/263 (5%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF-------VSMDINGCMHNVV 56
           +S    ++  +G   ++FV+  L+  +   G +  A + F       + +  NGC     
Sbjct: 146 SSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGC----- 200

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
               L+    K      +L  Y E+L  G  P V T+N L + L +  +V+ A  +FDE+
Sbjct: 201 --KCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEI 258

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           + + +     ++NT I+G CK+G + E   L   +   +    +  YS LIDGLCK  +L
Sbjct: 259 RKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQL 318

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E A  LF+ +   GL+PN VT+  +I+G C +G++D A +++  M  KG+  + V +NTL
Sbjct: 319 EDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTL 378

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G  +     +  + +  M +R
Sbjct: 379 IDGLCKGGYFREARKFVGEMTKR 401



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 46/212 (21%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC-MHNVV----- 56
           EA + +  M +RG+ P+ F Y+TL+DG C  G+++ A E+   M   G  + NV      
Sbjct: 390 EARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAII 449

Query: 57  -----------------------------TYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                                        TY  +++G+CK  DV+    L  EM S G  
Sbjct: 450 SGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHI 509

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P V+TYN L +GL +  QV++A  L + M +  V  +  TYN  + G CK+G + +    
Sbjct: 510 PGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGD---- 565

Query: 148 FRTLRVLKCELGI----EAYSCLIDGLCKIGK 175
               + +K E+G+     +Y  L+  L K  K
Sbjct: 566 ---FQNVKTEMGLVSDYASYRSLLHELSKASK 594


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRP-NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA  +L  M + G  P NAF Y+ +I G    G    A E+F  M     + N +TYN
Sbjct: 43  LGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYN 102

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+I+G+ K  D+E    L  +M+  G++P  +TYN L  GL    ++     L DEM   
Sbjct: 103 TMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 162

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLE 177
            +  +  TY+   DGL +NG       LF   + LK  + I  Y+C  L++GLCK GK+ 
Sbjct: 163 KMVPDGFTYSILFDGLSRNGDSKAMLSLFG--KYLKNGVTIGDYTCSILLNGLCKDGKVS 220

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+ QSL   GL+P  V YN +I+G+C  G+++ A   F  M+++ + P+ +T+N L+
Sbjct: 221 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 280

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G  +    +   +LL  M +
Sbjct: 281 NGLCKAERITNAQDLLMEMQD 301



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 130/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + D M +R V PN   Y+T+IDG    G+++    L   M  +G   N +TYN L+
Sbjct: 81  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 140

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+  L  EM S+ + P   TY+ LF GL      +  L LF +   + V 
Sbjct: 141 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVT 200

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T +  ++GLCK+G +  A E+ ++L           Y+ LI+G C+ G+LE A+  
Sbjct: 201 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 260

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +    + P+ +TYN +I+G C   ++  A DL ++M+  GV P   TFNTL+    R
Sbjct: 261 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 320

Query: 243 NNETSKVVELLHRMDE 258
             +  K   +L  M E
Sbjct: 321 TGQLEKCFIVLSEMQE 336



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 140/326 (42%), Gaps = 70/326 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGF------------------------------ 30
           M E S LLD M  + + P+ F YS L DG                               
Sbjct: 149 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSI 208

Query: 31  -----CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                C  G++  A E+  S+   G +   V YNTLINGYC+T ++E + + + +M S+ 
Sbjct: 209 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 268

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID------------ 133
           I+P  +TYN L +GL +  ++ +A  L  EMQ + V     T+NT ID            
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328

Query: 134 -----------------------GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
                                    CKNG I EA  +   +         + Y+ +ID  
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            + G  + A+ L + +   G+ P++VTYN++I G CN  Q+ +A ++   +    + P+ 
Sbjct: 389 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 448

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
           V++NTL+  C       K ++L  RM
Sbjct: 449 VSYNTLISACCYRGNIDKALDLQQRM 474



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 125/250 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  R ++P+   Y+ LI+G C    I  A++L + M  NG    V T+NTLI+ Y +T  
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 323

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E+   + SEM   G++P VV+Y ++ +   +  ++  A+ + D+M H DV      YN 
Sbjct: 324 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 383

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID   ++G   +A  L   ++       I  Y+ LI GLC   ++  A E+  SL    
Sbjct: 384 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L+P+ V+YN +I   C  G +DKA DL   M   G+     T++ L+ G       +++ 
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 503

Query: 251 ELLHRMDERN 260
            L  +M + N
Sbjct: 504 YLYQKMMQNN 513



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 113/234 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M   GV P    ++TLID +  TG++++   +   M  NG   NVV+Y +++N
Sbjct: 292 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 351

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK   + E++ +  +M  K + P    YN +     E    + A  L ++M+ + ++ 
Sbjct: 352 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 411

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  I GLC    I EA E+  +L   +      +Y+ LI   C  G ++ A +L 
Sbjct: 412 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 471

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           Q + + G+   V TY+ +I G    G++++   L+  M    V P+    N ++
Sbjct: 472 QRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 525



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++   RL D M+  G++PNA  Y+ L+ G C  G +     L   M     + +  TY+ 
Sbjct: 114 LEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSI 173

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G  +  D +  L+L+ + L  G+     T + L +GL +  +V  A ++   + ++ 
Sbjct: 174 LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 233

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      YNT I+G C+ G +  A   F  ++    +     Y+ LI+GLCK  ++  A 
Sbjct: 234 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 293

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ P V T+N +I  +   GQ++K   +  +M+  G+ PN V++ +++   
Sbjct: 294 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 353

Query: 241 IRNNETSKVVELLHRM 256
            +N +  + V +L  M
Sbjct: 354 CKNGKIPEAVAILDDM 369



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 107/218 (49%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G++PN   Y ++++ FC  G+I  A  +   M     + N   YN +I+ Y 
Sbjct: 330 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 389

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +    +++  L  +M S GI P++VTYN L  GL    Q+  A ++ + + +  +  +  
Sbjct: 390 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 449

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I   C  G I +A +L + +     +  +  Y  LI GL   G+L     L+Q +
Sbjct: 450 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 509

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +  ++P+   +NIM+  +   G   KA DL  +M  K
Sbjct: 510 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 1/258 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTL 61
           +  R   ++   G RP+ F ++  +      G++  A  +   M  +G    N  +YN +
Sbjct: 10  DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 69

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G  +     +++ ++ EM  + + P  +TYNT+  G  +   +E   +L D+M    +
Sbjct: 70  IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGL 129

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  + GLC+ G + E + L   +   K       YS L DGL + G  +    
Sbjct: 130 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 189

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF    + G+     T +I+++G C DG++  A ++   +   G+ P  V +NTL+ G  
Sbjct: 190 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 249

Query: 242 RNNETSKVVELLHRMDER 259
           +  E         +M  R
Sbjct: 250 QTGELEGAFSTFGQMKSR 267



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 79/150 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L++ M   G+ P+   Y+ LI G C   +I  A E+  S+  +  + + V+YNTL
Sbjct: 395 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 454

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  C   +++++L+L   M   GI+ TV TY+ L  GL    ++     L+ +M  ++V
Sbjct: 455 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 514

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
               + +N  ++   K G  ++A +L + +
Sbjct: 515 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +++ +    + P+A  Y+TLI   C  G ID+A +L   M   G    V TY+ 
Sbjct: 429 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 488

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G      + E   LY +M+   + P+   +N +         VE   K  +E++  D
Sbjct: 489 LISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM---------VEAYSKYGNEIKAED 539

Query: 121 VAAE 124
           +  E
Sbjct: 540 LRKE 543


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 141/256 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +L  +++ GV P+   Y+ L++ +C  G++ +A      M+  G   N +T+NT
Sbjct: 341 IEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNT 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +C+T +V+ +      M+ KG+ PTV TYN+L +G  +        +  DEM  + 
Sbjct: 401 VISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +Y + I+ LCK+  +++A  +   +         E Y+ LI+  C + KL+ A+
Sbjct: 461 IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAF 520

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  + + G+   +VTYN +I+G   +G++ KA DLFL M  KG  P+ +T+N+L+ G 
Sbjct: 521 RFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGY 580

Query: 241 IRNNETSKVVELLHRM 256
            ++  T K +EL  +M
Sbjct: 581 AKSVNTQKCLELYDKM 596



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 28/277 (10%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +I  G RP+A  Y   +    +  ++D+  EL  SM  +G   +V  YN ++ G CK + 
Sbjct: 148 VIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRR 207

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++  L+ EM+ + + P  VTYNTL  G  ++  +E AL   + M+  +V     TYN+
Sbjct: 208 IKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNS 267

Query: 131 FIDGLCKNGYIVEAAELFRTLRV----------------------------LKCELGIEA 162
            ++GLC +G + +A E+   +                               +  +    
Sbjct: 268 LLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERT 327

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y  L++GLC++G++E A E+   L   G+ P+ ++YNI+++ +C +G + KA      ME
Sbjct: 328 YCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQME 387

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +G+ PN +TFNT++       E       + RM E+
Sbjct: 388 ERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEK 424



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 34/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A   +  M+++GV P    Y++LI+G+   G   R  E    MD  G   NV++Y +
Sbjct: 411 VDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGS 470

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK + + ++  + ++M+ +G+ P    YN L      + +++ A + FDEM  S 
Sbjct: 471 LINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSG 530

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A   TYNT I+GL +NG + +A +LF  +    C   +  Y+ LI G  K    +   
Sbjct: 531 IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCL 590

Query: 181 ELFQSL------PRVG----------------------------LMPNVVTYNIMIHGFC 206
           EL+  +      P VG                            L+P+   YN MI+ + 
Sbjct: 591 ELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYA 650

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            DG + KA  L   M  +GV  + VT+N+L+L  +R+   S++  L+  M  +
Sbjct: 651 EDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK 703



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 28/287 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+ L   M + G  P+    + L+     +   ++   +F  +  +G   + V Y  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +      KD+++   L   M+  G+ P+V  YN +  GL ++ +++ A KLFDEM   +
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T TYNT IDG CK G I EA      ++    E  +  Y+ L++GLC  G+++ A 
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 181 ELFQSLPRVGLMP----------------------------NVVTYNIMIHGFCNDGQMD 212
           E+   +   G +P                            +  TY I+++G C  G+++
Sbjct: 283 EVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIE 342

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           KA ++   +   GV P+ +++N L+    +  +  K +    +M+ER
Sbjct: 343 KAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 1/229 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R  D MIQ G+      Y+TLI+G    G + +A +LF+ M   GC  +V+TYN+
Sbjct: 516 LKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNS 575

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K+ + ++ L LY +M   GI+PTV T++ L +   +   V    K+F EM   D
Sbjct: 576 LISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRK-EGVVTMDKMFQEMLQMD 634

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  I    ++G +++A  L + +     +     Y+ LI    +  ++    
Sbjct: 635 LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIK 694

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            L   +   GL+P V TYNI+I G C+    + A+  + +M  +G+  N
Sbjct: 695 HLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLN 743



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 35/193 (18%)

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           +K ++E+ +LYS M   G  P+  + N L   L +    E  L +F ++  S    +   
Sbjct: 100 SKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVA 159

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y          G  V+AA + +                          L+  +EL +S+ 
Sbjct: 160 Y----------GKAVQAAVMLK-------------------------DLDKGFELMKSMV 184

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           + G+ P+V  YN+++ G C   ++  A  LF +M  + + PN VT+NTL+ G  +     
Sbjct: 185 KDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIE 244

Query: 248 KVVELLHRMDERN 260
           + +    RM E+N
Sbjct: 245 EALGFKERMKEQN 257



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 67/139 (48%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++   M+Q  + P+ FVY+ +I  +   G + +A  L   M   G   + VTYN+LI  Y
Sbjct: 625 KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAY 684

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            + + V E  +L  +M +KG+ P V TYN L  GL ++     A   + EM    +    
Sbjct: 685 LRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNV 744

Query: 126 STYNTFIDGLCKNGYIVEA 144
           S     I GL + G + EA
Sbjct: 745 SMCYQLISGLREEGMLREA 763



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 46/107 (42%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M+ +GV  +   Y++LI  +     +   + L   M   G +  V TYN LI
Sbjct: 657 KAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
            G C  KD   +   Y EM+ +G+   V     L  GL E   +  A
Sbjct: 717 KGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA 763


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 130/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA   L  M++ G +P+AF Y   I G+   GE   A +    M   G + N V    
Sbjct: 506 MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTG 565

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN YCK   V E+ + +  M+ +GI     TY  L +GL +  +V  A ++F EM+   
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  +Y T IDG  K G + +A+ +F  +        +  Y+ L+ G C+ G++E A 
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G  PN VTY  +I G+C  G + +A  LF +M+ KG+ P+   + TL+ GC
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGC 745

Query: 241 IRNNETSKVVELLH 254
            R N+  + + +  
Sbjct: 746 CRLNDVERAITIFE 759



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 131/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R+L  M ++G+ P+ F Y++LI G     ++D AR   + M  NG   +  TY   I
Sbjct: 473 DAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFI 532

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY +  +   +     EML  G+ P  V    L +   +  +V  A   F  M    + 
Sbjct: 533 SGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGIL 592

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   ++GL KNG + +A E+F  +R       + +Y  LIDG  K+G ++ A  +
Sbjct: 593 GDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSI 652

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + + GL  NV+ YN+++ GFC  G+++KA +L  +M  KG  PN VT+ T++ G  +
Sbjct: 653 FDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCK 712

Query: 243 NNETSKVVELLHRM 256
           + + ++  +L   M
Sbjct: 713 SGDLAEAFQLFDEM 726



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 38/298 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +   M  +G+ P+ F Y TLIDGF   G + +A  +F  M   G   NV+ YN 
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNM 670

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+C++ ++E++  L  EM  KG  P  VTY T+  G  +   +  A +LFDEM+   
Sbjct: 671 LLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKG 730

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRT-------------------LRVLKCELGIE 161
           +  ++  Y T +DG C+   +  A  +F T                    +  K EL  +
Sbjct: 731 LVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTD 790

Query: 162 -------------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
                               Y+ +ID LCK G LE A ELF  + +  LMP V+TY  ++
Sbjct: 791 MINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLL 850

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +G+   G+  +   +F ++ A G+ P+ + ++ ++   ++   T+K + LL +M  +N
Sbjct: 851 NGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKN 908



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 118/258 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M  +G+ P+   Y+ LIDG C    ++ A+ L V M+  G   + V Y+ 
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K ++ + +  L  EM+S G     + Y+     + +   +E A  LFD M    
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V      Y + I+G  +   + +  EL   ++     +    Y   + G+C  G L+ A+
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   G  PNVV Y  +I  F    +   A  +  +M  +G+AP+   +N+L++G 
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGL 500

Query: 241 IRNNETSKVVELLHRMDE 258
            +  +  +    L  M E
Sbjct: 501 SKAKKMDEARSFLLEMVE 518



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 109/224 (48%)

Query: 36  IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           +D A EL  SM   G + +  +YN LI+G CK K +E++ +L  EM S G+    V Y+ 
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L  GL +    + A  L  EM     + +   Y+ FI  + K G + +A  LF  +    
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
              G  AY+ LI+G  +   +   +EL   + +  ++ +  TY   + G C+ G +D A+
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++  +M A G  PN V + TL+   ++ +     V +L  M E+
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQ 484



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 45/258 (17%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH--------- 53
           EA +L D M  +G+ P++FVY+TL+DG C   +++RA  +F + +  GC           
Sbjct: 718 EAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNE-KGCASSSAPFNALI 776

Query: 54  ------------------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
                                         N VTYN +I+  CK  ++E +  L+  M  
Sbjct: 777 NWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQK 836

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
             + PTV+TY +L +G  ++ +      +FDE+  + +  +   Y+  I+   K G   +
Sbjct: 837 ANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTK 896

Query: 144 AAELFRTLRVLK-----CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           A  L   +         C+L I     L+ G  K+G++E A ++ +++ R+  +P+  T 
Sbjct: 897 ALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTV 956

Query: 199 NIMIHGFCNDGQMDKAHD 216
             +I+  C       A D
Sbjct: 957 IELINESCISSNQRMAAD 974



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 25/264 (9%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVS---MDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
            ++  LIDG+   G +D A  +F S   +D++  + ++   N L++   K   ++   ++
Sbjct: 153 LLFGILIDGYIEKGFLDEAVFVFSSTKDLDLD-LVPSLARCNHLLDALLKRNRLDLFWDV 211

Query: 78  YSEMLSKGIRPTVVTYNTLFHG-------------LFEIHQ--------VEHALKLFDEM 116
           Y  M+ + +   V +Y  L                L +  +        V+ AL+L   M
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSM 271

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               +     +YN  IDGLCK   + +A  L   +  +       AYS LIDGL K    
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNA 331

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A  L   +   G   + + Y+  I     +G M+KA  LF  M   GV P    + +L
Sbjct: 332 DAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASL 391

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  R     K  ELL  + +RN
Sbjct: 392 IEGFFREKNVRKGYELLVEIKKRN 415


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  RL   M   GV P+ +  + LI+G C   ++D A ELF  M   G + N VT+ T
Sbjct: 187 LDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK+  V+ +L +Y +ML +G  P ++TYNTL +GL     ++ A  L  EM    
Sbjct: 247 LIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A EL + +      L   AY+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P   TY ++I+GFC  G +  A  L  +M+  G  P  VT
Sbjct: 367 KMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 136/255 (53%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TLI+G+   G++D+   L  +M  +G   +V T   LIN
Sbjct: 155 AQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLIN 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++E+  L++EML KG+ P  VT+ TL  G  +  +V+ AL+++ +M     + 
Sbjct: 215 GLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLC+ G + +A +L   + +   +     Y+ LIDG CK G LETA+EL 
Sbjct: 275 DLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELR 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +    +  + V Y  +I G C +G+   A  +  +M + G+ P   T+  ++ G  + 
Sbjct: 335 KRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQ 394

Query: 244 NETSKVVELLHRMDE 258
            +     +LL  M  
Sbjct: 395 GDVKTASKLLKEMQR 409



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 113/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL +G   +  ++   +L   M 
Sbjct: 139 FNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMH 198

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  T    I+GLCK   + EA ELF  +           ++ LIDG CK G+++
Sbjct: 199 ASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVD 258

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ + R G  P+++TYN +I+G C  G + +A DL ++M  KG+ P+ +T+ TL+
Sbjct: 259 LALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLI 318

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  +  +     EL  RM E +
Sbjct: 319 DGSCKEGDLETAFELRKRMIEES 341



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 126/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + + ++ L+  FC  GEI  A+ +F ++   G   +VV++NTLINGY +  D+++ 
Sbjct: 131 GYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M + G+ P V T   L +GL +  +++ A +LF+EM    +     T+ T IDG
Sbjct: 191 FRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK+G +  A E+++ +        +  Y+ LI GLC+ G L+ A +L   +   GL P+
Sbjct: 251 HCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++ A +L   M  + +  + V +  L+ G  +        ++L 
Sbjct: 311 KITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQ-RGV-RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D AS +   +++ +G  R + +V+S LI  +  +G +  A E F     +       T  
Sbjct: 46  DSASAVFAAILETKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCR 105

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++    K K  +     Y E+L  G   ++  +N L H   +  ++  A  +FD +   
Sbjct: 106 KVLEHLMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKC 165

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     ++NT I+G  + G + +   L   +        +   + LI+GLCK  K++ A
Sbjct: 166 GLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEA 225

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ELF  +   GL+PN VT+  +I G C  G++D A +++  M  +G +P+ +T+NTL+ G
Sbjct: 226 NELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYG 285

Query: 240 CIRNNETSKVVELLHRM 256
             R  +  +  +L+  M
Sbjct: 286 LCRKGDLKQARDLIVEM 302


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 129/254 (50%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
            L+DLM   G  PN   Y+ +ID  C  G++D+AREL  S+   GC  N V YNT++ G 
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C  +   ++  L  EM+ +   P   T N + + L     ++   +  ++M      A  
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TYN  I G+C+ G++  A EL   ++   C+  I  Y+ L+ GLC   + E A EL   
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + +   +P+ VT+N +I   C  G + +A ++F  M  KG  PN  T++T++ G  +  +
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241

Query: 246 TSKVVELLHRMDER 259
             + +ELL+ M  +
Sbjct: 242 MEQALELLNEMASK 255



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 131/254 (51%), Gaps = 1/254 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LLD M++    PN    + +++     G + +       M  +GC  NVVTYN +I
Sbjct: 69  DAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVI 128

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   V+ +L L S M S G +P +VTYNTL  GL    Q E A +L  +M  +D  
Sbjct: 129 SGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCL 188

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+NT I  LC+ G I++A E+F+ +    C      YS +I GL K GK+E A EL
Sbjct: 189 PDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALEL 248

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G   + + Y ++      + ++++   +   ++  G++P  V FNT++L   R
Sbjct: 249 LNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCR 307

Query: 243 NNETSKVVELLHRM 256
           N +T   +++L  M
Sbjct: 308 NGKTDYAIDVLADM 321



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 9/242 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M   G +P+   Y+TL+ G C   + + A EL + M  N C+ + VT+NT
Sbjct: 137 VDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNT 196

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  C+   + ++  ++ +M  KG  P   TY+T+  GL +  ++E AL+L +EM    
Sbjct: 197 IISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKG 256

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG----LCKIGKL 176
              +   Y    + L K   I E  ++   L+    + GI   + L +     LC+ GK 
Sbjct: 257 YNTD-KMYQLLTESLNKEDKIEEVVQVVHKLQ----DSGISPQTVLFNTVLLVLCRNGKT 311

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A ++   +   G MP+ +TY I+I G   +G + +A +L   + ++ V  N +  N  
Sbjct: 312 DYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKNEA 371

Query: 237 ML 238
           +L
Sbjct: 372 LL 373



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 87/180 (48%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M ++G  P VVTYN +   +     V+ A +L + +        T  YNT + GLC    
Sbjct: 7   MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
            V+A EL   +    C       + +++ L + G L+      + + + G   NVVTYN 
Sbjct: 67  WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +I G C  G +D A +L  +M++ G  P+ VT+NTL+ G    ++     EL+ +M + +
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 127/237 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + GV PN   Y+TLI+GFC     D A ++   M   G   ++  Y  LI+G+CK +D
Sbjct: 619 MCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQD 678

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E +  L+SE+L  G+ P  V YN+L  G   ++ +E AL L   M    ++ +  TY T
Sbjct: 679 IETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTT 738

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDGL K G +V A +L+  +        I  Y+ LI+GLC  G+LE A ++   + R  
Sbjct: 739 LIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDS 798

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
           + PNV  YN +I G    G + +A  L  +M  KG+ PN  T++ L+ G I+   ++
Sbjct: 799 ITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSA 855



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 140/259 (54%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA RL D M+  GV+ N  V +TL+ G+C   ++  A E F  M+ NG   N VTY  
Sbjct: 330 MVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAV 389

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   CK  ++ ++ +LY++M +K I PTV   N+L  G  ++   E A KLFDE    D
Sbjct: 390 LIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD 449

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A   TYN+ +  LCK G + EA  L++ +          +Y+ +I G C+ G L+ A 
Sbjct: 450 I-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAA 508

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   GL PNV+TY+I++ G+  +G  + A  +F  M  + + P+  T+N  + G 
Sbjct: 509 SVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGL 568

Query: 241 IRNNETSKVVELLHRMDER 259
            +   TS+  ++L +  E+
Sbjct: 569 CKVGRTSEAQDMLKKFVEK 587



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ +   M+  G++PN   YS L+DG+   G+ + A  +F  M     + +  TYN 
Sbjct: 504 LDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNI 563

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ING CK     E+ ++  + + KG  P  +TYN++  G  +   V  AL  + EM  S 
Sbjct: 564 KINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESG 623

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+    TY T I+G CKN     A ++   +R    EL I AY  LIDG CK   +ETA 
Sbjct: 624 VSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETAS 683

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L   GL PN V YN +I G+ N   M+ A +L   M  +G++ +  T+ TL+ G 
Sbjct: 684 WLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGL 743

Query: 241 IRNNETSKVVELLHRMDER 259
           ++       ++L   M  +
Sbjct: 744 LKEGRLVLALDLYSEMSAK 762



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 12/260 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L   +++G  P    Y++++DGF   G +  A   +  M  +G   NV+TY TLI
Sbjct: 576 EAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLI 635

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK  + + +L + +EM +KG+   +  Y  L  G  +   +E A  LF E+    ++
Sbjct: 636 NGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLS 695

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG------IEAYSCLIDGLCKIGKL 176
             +  YN+ I G  +N   +EAA     L + K  LG      ++ Y+ LIDGL K G+L
Sbjct: 696 PNSVIYNSLISGY-RNLNNMEAA-----LNLQKRMLGEGISCDLQTYTTLIDGLLKEGRL 749

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A +L+  +   G++P+++ Y ++I+G C  GQ++ A  +  +ME   + PN   +N L
Sbjct: 750 VLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNAL 809

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G  +     +   L + M
Sbjct: 810 IAGHFKAGNLQEAFRLHNEM 829



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 128/242 (52%), Gaps = 9/242 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EAS+L D  +   +  N F Y++L+   C  G++  A  L+  M   G     V+YN++
Sbjct: 436 EEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSM 494

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+C+  +++ + +++S+ML  G++P V+TY+ L  G F+    E+A  +FD M   ++
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI 554

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLE 177
                TYN  I+GLCK G   EA ++ +       E G       Y+ ++DG  K G + 
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDMLKKF----VEKGFVPVCLTYNSIMDGFIKEGSVS 610

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +A   ++ +   G+ PNV+TY  +I+GFC +   D A  +  +M  KG+  +   +  L+
Sbjct: 611 SALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALI 670

Query: 238 LG 239
            G
Sbjct: 671 DG 672



 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 104/208 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A ++ + M  +G+  +   Y  LIDGFC   +I+ A  LF  +   G   N V YN+L
Sbjct: 645 DLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSL 704

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY    ++E +LNL   ML +GI   + TY TL  GL +  ++  AL L+ EM    +
Sbjct: 705 ISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGI 764

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +   Y   I+GLC  G +  A ++   +        +  Y+ LI G  K G L+ A+ 
Sbjct: 765 IPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFR 824

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
           L   +   GL PN  TY+I+I+G    G
Sbjct: 825 LHNEMLDKGLTPNDTTYDILINGKIKGG 852



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 3/254 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    + +++  + P     + L+        I  ARE++  M + G   +  T + 
Sbjct: 190 LNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHI 249

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++    K  + EE+   + E  S+G++     Y+ +     +   VE A  L  +M+   
Sbjct: 250 MMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKG 309

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+ + I    K G +VEA  L   +     ++ +   + L+ G CK  KL +A 
Sbjct: 310 WVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSAL 369

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E F  +   G  PN VTY ++I   C +G M KA+DL+  M+ K + P     N+L+ G 
Sbjct: 370 EFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGF 429

Query: 241 IR---NNETSKVVE 251
           ++     E SK+ +
Sbjct: 430 LKVESREEASKLFD 443



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 86/174 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ AS L   ++  G+ PN+ +Y++LI G+     ++ A  L   M   G   ++ TY T
Sbjct: 679 IETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTT 738

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K   +  +L+LYSEM +KGI P ++ Y  L +GL    Q+E+A K+  EM+   
Sbjct: 739 LIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDS 798

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           +      YN  I G  K G + EA  L   +           Y  LI+G  K G
Sbjct: 799 ITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +   L+D M++    PN   ++TLI   C  G  +R  E+   M  +GC  ++  Y T+I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +E +  + + M S G++P VV YNT+  GL    + + A +L  EM   D  
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +D  C+NG +    EL   +    C   +  Y+ +I+G CK G ++ A  L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +S+   G  PN V+Y I++ G C+ G+   A +L   M  +G  PN VTFNTL+    +
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 243 NNETSKVVELLHRM 256
                + +ELL +M
Sbjct: 474 KGLVEQAIELLKQM 487



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 131/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  M Q+    +   ++ L+D FC  G +DR  EL   M  +GCM +V+TY T+I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK   ++E++ L   M S G +P  V+Y  +  GL    +   A +L  +M      
Sbjct: 399 NGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP 458

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT I+ LCK G + +A EL + + V  C   + +YS +IDGL K GK E A EL
Sbjct: 459 PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ PN + Y+ +      +G+++K   +F +++   +  + V +N ++    +
Sbjct: 519 LNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCK 578

Query: 243 NNETSKVVELLHRM 256
             ET + ++    M
Sbjct: 579 RWETDRAIDFFAYM 592



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 132/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G  P+  +Y+T+IDG C  G ++ A E+   M   G   NVV YNT++ G C
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             +  +E+  L SEM  K      VT+N L     +   V+  ++L ++M       +  
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T I+G CK G I EA  L +++    C+    +Y+ ++ GLC  G+   A EL   +
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + G  PN VT+N +I+  C  G +++A +L   M   G +P+ ++++T++ G  +  +T
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 247 SKVVELLHRM 256
            + +ELL+ M
Sbjct: 513 EEALELLNVM 522



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 131/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+ +L+ M   G++PN   Y+T++ G C       A EL   M    C  + VT+N 
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +C+   V+  + L  +MLS G  P V+TY T+ +G  +   ++ A+ L   M    
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T +Y   + GLC  G  V+A EL   +    C      ++ LI+ LCK G +E A 
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + +   G  P++++Y+ +I G    G+ ++A +L   M  KG++PN + ++++    
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541

Query: 241 IRNNETSKVVELLHRMDE 258
            R    +KV+++   + +
Sbjct: 542 SREGRVNKVIQMFDNIKD 559



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M  +G  P   +Y  +++  C +G    +  +  +M   GC  +    N ++
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C+   V+E++ L  ++   G    +V+YN +  GL    +     +L DEM   D A
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT I  LC+NG      E+   +    C   I  Y+ +IDG+CK G LE A E+
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +P  GL PNVV YN ++ G C+  +  +A +L  +M  K    + VTFN L+    +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 243 NNETSKVVELLHRM 256
           N    +V+ELL +M
Sbjct: 369 NGLVDRVIELLEQM 382



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 116/226 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M   G +PN   Y+ ++ G C  G    A EL   M   GC  N VT+NT
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   VE+++ L  +ML  G  P +++Y+T+  GL +  + E AL+L + M +  
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  T  Y++    L + G + +  ++F  ++          Y+ +I  LCK  + + A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           + F  +   G MPN  TY ++I G  ++G   +A +L  ++ ++G 
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 18/261 (6%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L+ M  +G   +    + +++  C  G +D A  L   +   GC  ++V+YN ++ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 66  CKTK---DVEESLNLYSEMLSKGIRPTVVTYNTLF-----HGLFE-IHQVEHALKLFDEM 116
           C  K   DVEE   L  EM+     P +VT+NTL      +GLFE +H+V        +M
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV------LAQM 277

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                  +   Y T IDG+CK G++  A E+   +     +  +  Y+ ++ GLC   + 
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A EL   + +     + VT+NI++  FC +G +D+  +L   M + G  P+ +T+ T+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397

Query: 237 MLGCIRNNETSKVVELLHRMD 257
           + G  +     + V LL  M 
Sbjct: 398 INGFCKEGLIDEAVMLLKSMS 418



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 110/245 (44%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PNA+ +  ++ G C  G I  A E+   M   GC      Y+ ++   C++     S+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            +   M +KG        N + + + E   V+ A+ L  ++      A+  +YN  + GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C      +  EL   +  + C   I  ++ LI  LC+ G  E   E+   +   G  P++
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
             Y  +I G C +G ++ A+++   M + G+ PN V +NT++ G        +  ELL  
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 256 MDERN 260
           M +++
Sbjct: 347 MFQKD 351



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 32/234 (13%)

Query: 55  VVTYNTLINGYCKTKD--------------------------------VEESLNLYSEML 82
           VV YN ++ GYC+                                   + ++L +  EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG  P    Y+ +           +++++ + M       +T   N  ++ +C+ G + 
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA  L R L    CE  I +Y+ ++ GLC   +     EL   + RV   PN+VT+N +I
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              C +G  ++ H++   M   G  P+   + T++ G  +        E+L+RM
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 3/100 (3%)

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           + AY+ ++ G C+ G+L  A  L  ++P   + PN  T+  ++ G C  G++  A ++  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +M  KG AP    ++ ++    R+      V +L  M  +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAK 175


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +   L+D M++    PN   ++TLI   C  G  +R  E+   M  +GC  ++  Y T+I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +E +  + + M S G++P VV YNT+  GL    + + A +L  EM   D  
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +D  C+NG +    EL   +    C   +  Y+ +I+G CK G ++ A  L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +S+   G  PN V+Y I++ G C+ G+   A +L   M  +G  PN VTFNTL+    +
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 243 NNETSKVVELLHRM 256
                + +ELL +M
Sbjct: 474 KGLVEQAIELLKQM 487



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 131/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  M Q+    +   ++ L+D FC  G +DR  EL   M  +GCM +V+TY T+I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK   ++E++ L   M S G +P  V+Y  +  GL    +   A +L  +M      
Sbjct: 399 NGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP 458

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT I+ LCK G + +A EL + + V  C   + +YS +IDGL K GK E A EL
Sbjct: 459 PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ PN + Y+ +      +G+++K   +F +++   +  + V +N ++    +
Sbjct: 519 LNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCK 578

Query: 243 NNETSKVVELLHRM 256
             ET + ++    M
Sbjct: 579 RWETDRAIDFFAYM 592



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 132/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G  P+  +Y+T+IDG C  G ++ A E+   M   G   NVV YNT++ G C
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             +  +E+  L SEM  K      VT+N L     +   V+  ++L ++M       +  
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T I+G CK G I EA  L +++    C+    +Y+ ++ GLC  G+   A EL   +
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + G  PN VT+N +I+  C  G +++A +L   M   G +P+ ++++T++ G  +  +T
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 247 SKVVELLHRM 256
            + +ELL+ M
Sbjct: 513 EEALELLNVM 522



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 131/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+ +L+ M   G++PN   Y+T++ G C       A EL   M    C  + VT+N 
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +C+   V+  + L  +MLS G  P V+TY T+ +G  +   ++ A+ L   M    
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T +Y   + GLC  G  V+A EL   +    C      ++ LI+ LCK G +E A 
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + +   G  P++++Y+ +I G    G+ ++A +L   M  KG++PN + ++++    
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541

Query: 241 IRNNETSKVVELLHRMDE 258
            R    +KV+++   + +
Sbjct: 542 SREGRVNKVIQMFDNIKD 559



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M  +G  P   +Y  +++  C +G    +  +  +M   GC  +    N ++
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C+   V+E++ L  ++   G    +V+YN +  GL    +     +L DEM   D A
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT I  LC+NG      E+   +    C   I  Y+ +IDG+CK G LE A E+
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +P  GL PNVV YN ++ G C+  +  +A +L  +M  K    + VTFN L+    +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 243 NNETSKVVELLHRM 256
           N    +V+ELL +M
Sbjct: 369 NGLVDRVIELLEQM 382



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 116/226 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M   G +PN   Y+ ++ G C  G    A EL   M   GC  N VT+NT
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   VE+++ L  +ML  G  P +++Y+T+  GL +  + E AL+L + M +  
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  T  Y++    L + G + +  ++F  ++          Y+ +I  LCK  + + A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           + F  +   G MPN  TY ++I G  ++G   +A +L  ++ ++G 
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 18/261 (6%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L+ M  +G   +    + +++  C  G +D A  L   +   GC  ++V+YN ++ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 66  CKTK---DVEESLNLYSEMLSKGIRPTVVTYNTLF-----HGLFE-IHQVEHALKLFDEM 116
           C  K   DVEE   L  EM+     P +VT+NTL      +GLFE +H+V        +M
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV------LAQM 277

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                  +   Y T IDG+CK G++  A E+   +     +  +  Y+ ++ GLC   + 
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A EL   + +     + VT+NI++  FC +G +D+  +L   M + G  P+ +T+ T+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397

Query: 237 MLGCIRNNETSKVVELLHRMD 257
           + G  +     + V LL  M 
Sbjct: 398 INGFCKEGLIDEAVMLLKSMS 418



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 110/245 (44%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PNA+ +  ++ G C  G I  A E+   M   GC      Y+ ++   C++     S+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            +   M +KG        N + + + E   V+ A+ L  ++      A+  +YN  + GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C      +  EL   +  + C   I  ++ LI  LC+ G  E   E+   +   G  P++
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
             Y  +I G C +G ++ A+++   M + G+ PN V +NT++ G        +  ELL  
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 256 MDERN 260
           M +++
Sbjct: 347 MFQKD 351



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 32/234 (13%)

Query: 55  VVTYNTLINGYCKTKD--------------------------------VEESLNLYSEML 82
           VV YN ++ GYC+                                   + ++L +  EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG  P    Y+ +           +++++ + M       +T   N  ++ +C+ G + 
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA  L R L    CE  I +Y+ ++ GLC   +     EL   + RV   PN+VT+N +I
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              C +G  ++ H++   M   G  P+   + T++ G  +        E+L+RM
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312



 Score = 40.4 bits (93), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 3/100 (3%)

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           + AY+ ++ G C+ G+L  A  L  ++P   + PN  T+  ++ G C  G++  A ++  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +M  KG AP    ++ ++    R+      V +L  M  +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAK 175


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 5/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRP-NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA  +L  M + G  P NAF Y+ +I G    G    A E+F  M     + N +TYN
Sbjct: 180 LGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYN 239

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+I+G+ K  D+E    L  +M+  G++P  +TYN L  GL    ++     L DEM   
Sbjct: 240 TMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 299

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLE 177
            +  +  TY+   DGL +NG       LF   + LK  + I  Y+C  L++GLCK GK+ 
Sbjct: 300 KMVPDGFTYSILFDGLSRNGDSKAMLSLFG--KYLKNGVTIGDYTCSILLNGLCKDGKVS 357

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+ QSL   GL+P  V YN +I+G+C  G+++ A   F  M+++ + P+ +T+N L+
Sbjct: 358 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 417

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G  +    +   +LL  M +
Sbjct: 418 NGLCKAERITNAQDLLMEMQD 438



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 130/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + D M +R V PN   Y+T+IDG    G+++    L   M  +G   N +TYN L+
Sbjct: 218 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 277

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+  L  EM S+ + P   TY+ LF GL      +  L LF +   + V 
Sbjct: 278 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVT 337

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T +  ++GLCK+G +  A E+ ++L           Y+ LI+G C+ G+LE A+  
Sbjct: 338 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 397

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +    + P+ +TYN +I+G C   ++  A DL ++M+  GV P   TFNTL+    R
Sbjct: 398 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 457

Query: 243 NNETSKVVELLHRMDE 258
             +  K   +L  M E
Sbjct: 458 TGQLEKCFIVLSEMQE 473



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 35/280 (12%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++ GV    +  S L++G C  G++  A E+  S+   G +   V YNTLINGYC+T ++
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E + + + +M S+ I+P  +TYN L +GL +  ++ +A  L  EMQ + V     T+NT 
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451

Query: 132 ID-----------------------------------GLCKNGYIVEAAELFRTLRVLKC 156
           ID                                     CKNG I EA  +   +     
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
               + Y+ +ID   + G  + A+ L + +   G+ P++VTYN++I G CN  Q+ +A +
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 571

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   +    + P+ V++NTL+  C       K ++L  RM
Sbjct: 572 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 611



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E S LLD M  + + P+ F YS L DG    G+      LF     NG      T + 
Sbjct: 286 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSI 345

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   V  +  +   +++ G+ PT V YNTL +G  +  ++E A   F +M+   
Sbjct: 346 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 405

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+GLCK   I  A +L   ++       +E ++ LID   + G+LE  +
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 465

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   GL PNVV+Y  +++ FC +G++ +A  +  DM  K V PN   +N ++   
Sbjct: 466 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 525

Query: 241 IRNNETSKVVELLHRM 256
           + +    +   L+ +M
Sbjct: 526 VEHGPNDQAFILVEKM 541



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 125/250 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  R ++P+   Y+ LI+G C    I  A++L + M  NG    V T+NTLI+ Y +T  
Sbjct: 401 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 460

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E+   + SEM   G++P VV+Y ++ +   +  ++  A+ + D+M H DV      YN 
Sbjct: 461 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 520

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID   ++G   +A  L   ++       I  Y+ LI GLC   ++  A E+  SL    
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L+P+ V+YN +I   C  G +DKA DL   M   G+     T++ L+ G       +++ 
Sbjct: 581 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 640

Query: 251 ELLHRMDERN 260
            L  +M + N
Sbjct: 641 YLYQKMMQNN 650



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 113/234 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M   GV P    ++TLID +  TG++++   +   M  NG   NVV+Y +++N
Sbjct: 429 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 488

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK   + E++ +  +M  K + P    YN +     E    + A  L ++M+ + ++ 
Sbjct: 489 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 548

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  I GLC    I EA E+  +L   +      +Y+ LI   C  G ++ A +L 
Sbjct: 549 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 608

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           Q + + G+   V TY+ +I G    G++++   L+  M    V P+    N ++
Sbjct: 609 QRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 662



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 123/251 (49%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RL D M+  G++PNA  Y+ L+ G C  G +     L   M     + +  TY+ L +G 
Sbjct: 256 RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 315

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            +  D +  L+L+ + L  G+     T + L +GL +  +V  A ++   + ++ +    
Sbjct: 316 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 375

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             YNT I+G C+ G +  A   F  ++    +     Y+ LI+GLCK  ++  A +L   
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G+ P V T+N +I  +   GQ++K   +  +M+  G+ PN V++ +++    +N +
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495

Query: 246 TSKVVELLHRM 256
             + V +L  M
Sbjct: 496 IPEAVAILDDM 506



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 107/218 (49%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G++PN   Y ++++ FC  G+I  A  +   M     + N   YN +I+ Y 
Sbjct: 467 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 526

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +    +++  L  +M S GI P++VTYN L  GL    Q+  A ++ + + +  +  +  
Sbjct: 527 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 586

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I   C  G I +A +L + +     +  +  Y  LI GL   G+L     L+Q +
Sbjct: 587 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 646

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +  ++P+   +NIM+  +   G   KA DL  +M  K
Sbjct: 647 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 1/259 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTL 61
           +  R   ++   G RP+ F ++  +      G++  A  +   M  +G    N  +YN +
Sbjct: 147 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 206

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G  +     +++ ++ EM  + + P  +TYNT+  G  +   +E   +L D+M    +
Sbjct: 207 IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGL 266

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  + GLC+ G + E + L   +   K       YS L DGL + G  +    
Sbjct: 267 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 326

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF    + G+     T +I+++G C DG++  A ++   +   G+ P  V +NTL+ G  
Sbjct: 327 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 386

Query: 242 RNNETSKVVELLHRMDERN 260
           +  E         +M  R+
Sbjct: 387 QTGELEGAFSTFGQMKSRH 405



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 79/150 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L++ M   G+ P+   Y+ LI G C   +I  A E+  S+  +  + + V+YNTL
Sbjct: 532 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 591

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  C   +++++L+L   M   GI+ TV TY+ L  GL    ++     L+ +M  ++V
Sbjct: 592 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 651

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
               + +N  ++   K G  ++A +L + +
Sbjct: 652 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +++ +    + P+A  Y+TLI   C  G ID+A +L   M   G    V TY+ 
Sbjct: 566 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 625

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G      + E   LY +M+   + P+   +N +         VE   K  +E++  D
Sbjct: 626 LISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM---------VEAYSKYGNEIKAED 676

Query: 121 VAAE 124
           +  E
Sbjct: 677 LRKE 680


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 131/238 (55%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D A  L   M + G  P+ F Y  ++D    +  I+   ++   M   G     VTYNT
Sbjct: 782  IDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNT 841

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +I+G  K+K ++E++NLY +++S+G  PT  TY  L  GL +   +E A  LFDEM    
Sbjct: 842  IISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECG 901

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 + YN  ++G    G   +  ELF ++        I++Y+ +ID LC  G+L    
Sbjct: 902  CEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGL 961

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              F+ L  +GL P+++TYN++IHG    G++++A  L+ DME KG+APN  T+N+L+L
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + D M Q+G+ P  + Y++LI GF      +RA ELF  M+I+G   N  T+  
Sbjct: 362 VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVL 421

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            IN + K+ +  ++L  Y  M SKGI P VV  N + +GL +  ++  A ++F E++   
Sbjct: 422 FINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMG 481

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TY   I    K     EA ++F  +   +C   + A + LID L K G+   AW
Sbjct: 482 ISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAW 541

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  L  + L P   TYN ++ G   +G++ +   L   M +    PN +T+NT++   
Sbjct: 542 KIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCL 601

Query: 241 IRNNETSKVVELLHRM 256
            +N E +  +++L+ M
Sbjct: 602 CKNGEVNYALDMLYSM 617



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 128/254 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A   L +M + G+  NA+ Y+ LI     +G    A +++ +M  +G +  V TY+ L+ 
Sbjct: 155 APVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLML 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            + K +D E  + L  EM ++G+RP V +Y      L +  ++E A ++  +M+      
Sbjct: 215 AFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T    I  LC  G + +A ++F  ++    +     Y  L+D     G   +  E++
Sbjct: 275 DVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIW 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            +L   G   NVV+Y   +   C  G++D+A D+F +M+ KG+ P   ++N+L+ G ++ 
Sbjct: 335 NALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKA 394

Query: 244 NETSKVVELLHRMD 257
           +  ++ +EL + M+
Sbjct: 395 DRFNRALELFNHMN 408



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 107/236 (45%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +DEA  L   ++  G  P    Y  L+DG    G I+ A  LF  M   GC  N   YN 
Sbjct: 852  LDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNI 911

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L+NGY    D E+   L+  M+ +G+ P + +Y  +   L    ++   L  F ++    
Sbjct: 912  LLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 971

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  +  TYN  I GL K+G + EA  L+  +        +  Y+ LI  L K GK   A 
Sbjct: 972  LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAG 1031

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            ++++ L   G  PNV TYN +I G+   G  + A   +  M   G  PN  T+  L
Sbjct: 1032 KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 133/256 (51%), Gaps = 4/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +  +LM  +G+ P+    + ++ G   TG +  A+ +F  +   G   + +TY  +I
Sbjct: 434 KALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMI 493

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               K  + +E++ +++EM+     P V+  N+L   L++  +   A K+F E++  ++ 
Sbjct: 494 KCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLE 553

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT + GL + G + E  +L   +        I  Y+ ++D LCK G++  A ++
Sbjct: 554 PTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDM 613

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+   G MP++ +YN +++G   +G++D+A  +F  M+ K +AP+  T  T++   +R
Sbjct: 614 LYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVR 672

Query: 243 NNETSKVVELLHRMDE 258
              +  + E LH + E
Sbjct: 673 ---SGLMKEALHTVRE 685



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 126/264 (47%), Gaps = 9/264 (3%)

Query: 3   EASRLLDL------MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV 56
           +A RL D       M     +P+   Y TL+D    +G+     E++ ++  +G   NVV
Sbjct: 288 DAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVV 347

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           +Y   ++  C+   V+E+L+++ EM  KGI P   +YN+L  G  +  +   AL+LF+ M
Sbjct: 348 SYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM 407

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                     T+  FI+   K+G  ++A + +  ++       + A + ++ GL K G+L
Sbjct: 408 NIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRL 467

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  +F  L  +G+ P+ +TY +MI         D+A  +F +M     AP+ +  N+L
Sbjct: 468 GMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSL 527

Query: 237 ---MLGCIRNNETSKVVELLHRMD 257
              +    R NE  K+   L  M+
Sbjct: 528 IDMLYKAGRGNEAWKIFYELKEMN 551



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 127/258 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+L  M + G +P+    + LI   C  G +  A+++F  M  +    + VTY T
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++    + D      +++ + + G    VV+Y      L ++ +V+ AL +FDEM+   
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +YN+ I G  K      A ELF  + +         +   I+   K G+   A 
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + ++ +   G++P+VV  N +++G    G++  A  +F +++A G++P+ +T+  ++  C
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 241 IRNNETSKVVELLHRMDE 258
            + +   + +++   M E
Sbjct: 497 SKASNADEAMKIFAEMIE 514



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 126/257 (49%), Gaps = 4/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA ++   + +  + P    Y+TL+ G    G++    +L   M+ N    N++TYNT+
Sbjct: 538 NEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTV 597

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++  CK  +V  +L++   M   G  P + +YNT+ +GL +  +++ A  +F +M+   +
Sbjct: 598 LDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-L 656

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS--CLIDGLCKIGKLETA 179
           A + +T  T +    ++G + EA    R   +L+ +  ++  S   L++G+ K    E +
Sbjct: 657 APDYATVCTILPSFVRSGLMKEALHTVREY-ILQPDSKVDRSSVHSLMEGILKRDGTEKS 715

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E  +++   GL+ + +  + +I  FC   +   AH+L    E  GV+    ++N L+ G
Sbjct: 716 IEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICG 775

Query: 240 CIRNNETSKVVELLHRM 256
            +  +      EL   M
Sbjct: 776 LVDEDLIDIAEELFSEM 792



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 117/319 (36%), Gaps = 70/319 (21%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD----------------------I 48
           M   G  P+   Y+T++ G    G +D A  +F  M                       +
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLM 676

Query: 49  NGCMHNVVTY-------------NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
              +H V  Y             ++L+ G  K    E+S+     + S G+    +  + 
Sbjct: 677 KEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSP 736

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           +     +  +   A +L  + ++  V+ +T +YN  I GL     I  A ELF  ++ L 
Sbjct: 737 IIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLG 796

Query: 156 CE----------------------LGIE-------------AYSCLIDGLCKIGKLETAW 180
           C+                      L I+              Y+ +I GL K   L+ A 
Sbjct: 797 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAI 856

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  L   G  P   TY  ++ G   DG ++ A  LF +M   G  PNC  +N L+ G 
Sbjct: 857 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 916

Query: 241 IRNNETSKVVELLHRMDER 259
               +T KV EL   M E+
Sbjct: 917 RIAGDTEKVCELFESMVEQ 935



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 7/193 (3%)

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI----HQVEHALKLFDEMQHSDVAAET 125
           D EE+L L+   LS   +P VV      + + E+     +V    ++FD MQ   + A  
Sbjct: 80  DPEEALELF---LSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANV 136

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            T+ T    +   G +  A      ++     L    Y+ LI  L K G    A +++++
Sbjct: 137 GTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKA 196

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G++P V TY++++  F      +    L  +MEA+GV PN  ++   +    +   
Sbjct: 197 MAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGR 256

Query: 246 TSKVVELLHRMDE 258
             +   +L +M+E
Sbjct: 257 LEEAYRILRKMEE 269



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 7/157 (4%)

Query: 107 EHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAY 163
           E AL+LF  + +   V   T + N  ++ +  +G + + A++F  ++  ++K  +G    
Sbjct: 82  EEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGT--- 138

Query: 164 SCLIDGLCKI-GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
            C + G   + G L +A      +   G++ N  TYN +I+     G   +A D++  M 
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA 198

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A GV P   T++ LML   +  +   VV LL  M+ R
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR 235



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA ++ + ++ +G +PN F Y+ LI G+ ++G  + A   +  M + GC  N  TY  L 
Sbjct: 1029 EAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLP 1088

Query: 63   N 63
            N
Sbjct: 1089 N 1089


>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
 gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 132/255 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D + ++G+  N   Y  LIDG C  GE++ A  L   M   G   N + YNTLI+
Sbjct: 55  AFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLID 114

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK   ++E+  +   M  KG    + T NT+  GL +++Q E A +    M    V  
Sbjct: 115 GYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVP 174

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y T ID  CK G  VEA +LF+ ++    E     Y+ LIDG  K G+++ A+EL 
Sbjct: 175 NVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELR 234

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+ P++ TY  ++HG C  G++D A +LF ++  KG+  N VT+  ++ G  + 
Sbjct: 235 DEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKE 294

Query: 244 NETSKVVELLHRMDE 258
             + +  +L   M E
Sbjct: 295 GRSEEAFKLYDEMTE 309



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 125/237 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L++ M  RG+  N  +Y+TLIDG+C  G ID A ++ V M+  G  +++ T NT
Sbjct: 87  MEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNT 146

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           + +G  K    EE+      M+ KG+ P VV+Y TL     +      A KLF EM+ + 
Sbjct: 147 IADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAG 206

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  IDG  K G + EA EL   +R       I  Y+ L+ G C  GKL+ A 
Sbjct: 207 GEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAV 266

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ELF  + + GL  NVVTY  +I G   +G+ ++A  L+ +M   G+ P+   + +L+
Sbjct: 267 ELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLV 323



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  R+ + M ++G++ +  VY+ +I+  C  G   RA  LF  +   G + NV TY  
Sbjct: 17  IDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGA 76

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  ++E +  L +EM ++G+    + YNTL  G  +   ++ A K+   M+   
Sbjct: 77  LIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKG 136

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T NT  DGL K     EA     T+        + +Y+ LID  CK G    A 
Sbjct: 137 FENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAK 196

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LFQ + + G  PN VTYN++I G    G+M +A++L  +M AKG+ P+  T+ +L+ G 
Sbjct: 197 KLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGE 256

Query: 241 IRNNETSKVVELLHRMDER 259
               +    VEL + + ++
Sbjct: 257 CIFGKLDDAVELFNEVRQK 275



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 115/234 (49%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ LID    +G+ID    +F  M   G   ++  Y  +IN  CK  + + +  L+ E+ 
Sbjct: 4   YTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELT 63

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG+   V TY  L  G+ +  ++E A  L +EMQ   +      YNT IDG CK G I 
Sbjct: 64  EKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLID 123

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA ++   +     E  I   + + DGL K+ + E A     ++   G++PNVV+Y  +I
Sbjct: 124 EAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLI 183

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +C +G   +A  LF +M+  G  PN VT+N L+ G  +     +  EL   M
Sbjct: 184 DIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEM 237



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 71/135 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M + G  PNA  Y+ LIDG    G +  A EL   M   G   ++ TY +L+
Sbjct: 194 EAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLL 253

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C    +++++ L++E+  KG+   VVTY  +  GL +  + E A KL+DEM  + + 
Sbjct: 254 HGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLT 313

Query: 123 AETSTYNTFIDGLCK 137
            +   Y + +  L K
Sbjct: 314 PDDRVYTSLVSSLHK 328



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 78/170 (45%)

Query: 90  VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
           V TY  L        +++   ++F+EM    + A+   Y   I+  CK G    A  LF 
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 150 TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
            L        +  Y  LIDG+CK G++E A  L   +   GL  N + YN +I G+C  G
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +D+A  + + ME KG   +  T NT+  G  + N+  +    L  M E+
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEK 170



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 54/100 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  L D M  +G+ P+ + Y++L+ G C+ G++D A ELF  +   G   NVVTY  
Sbjct: 227 MKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTA 286

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           +I+G  K    EE+  LY EM   G+ P    Y +L   L
Sbjct: 287 IISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSL 326


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 137/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RL   ++  G + N  +YS L+   C  G++D A +L   M+ N    ++VTY+ 
Sbjct: 307 IEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSI 366

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   V++++ LY EM    I P    ++ +  GL E   +  A   FD +  S+
Sbjct: 367 LIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSN 426

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  + + YN  IDG  K G + EA  L++ LR       I  ++ LI G CK  K+  A 
Sbjct: 427 LRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEAR 486

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L +S+   GL P+ VTY  +++ +C +G ++K H+L L+M  K + P  VT+  ++ G 
Sbjct: 487 RLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGL 546

Query: 241 IRNNETSKVVELLHRMDER 259
            +  +  + V+LL  M  +
Sbjct: 547 CKQRKLEESVQLLEDMRAK 565



 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 143/254 (56%), Gaps = 1/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYN 59
           M+EA  L + M ++G++P+   Y  +  GF L G +  ARE+   M  + G   ++VTY 
Sbjct: 236 MEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYT 295

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI G+C+  ++EE+L L  ++LS G +  V+ Y+ L   L +  QV+ AL+L  EM+ +
Sbjct: 296 VLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEAN 355

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++  +  TY+  I GLCK G + +A +L++ +   +      A+S ++ GLC+ G L  A
Sbjct: 356 NLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDA 415

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
              F SL    L P+V  YNIMI G+   G +++A  L+  +  K + P+ VTFN+L+ G
Sbjct: 416 RMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYG 475

Query: 240 CIRNNETSKVVELL 253
             +N +  +   LL
Sbjct: 476 FCKNRKVVEARRLL 489



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 135/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A +L   M    + PN+F +S ++ G C  G +  AR  F S+ ++    +V  YN 
Sbjct: 377 VQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNI 436

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY K  DVEE++ LY  +  K I P++VT+N+L +G  +  +V  A +L + ++   
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY T ++  C+ G I +  EL   + +   E  +  Y+ +I GLCK  KLE + 
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   GL P+ +TYN +I  FC    M KA +L  DM    + P   T+N L+ G 
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616

Query: 241 IRNNETSKVVELLHRMDERN 260
            R  +      +L  + +RN
Sbjct: 617 CRYGDVEDADRVLVSLQDRN 636



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 140/251 (55%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           ++   G++P+   Y+ LI G C  G I+ A  L   +  +G   NV+ Y+ L++  CK  
Sbjct: 281 MLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRG 340

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            V+E+L L  EM +  ++P +VTY+ L HGL +  +V+ A++L+ EM  + +   +  ++
Sbjct: 341 QVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHS 400

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             + GLC+ G + +A   F +L +      +  Y+ +IDG  K+G +E A  L++ L   
Sbjct: 401 GILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDK 460

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            + P++VT+N +I+GFC + ++ +A  L   ++  G+ P+ VT+ TLM         +K+
Sbjct: 461 AITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKL 520

Query: 250 VELLHRMDERN 260
            ELL  M+ ++
Sbjct: 521 HELLLEMNLKD 531



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 131/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RLL+ +   G+ P+A  Y+TL++ +C  G I++  EL + M++      VVTY  +I
Sbjct: 484 EARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVI 543

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CK + +EES+ L  +M +KG+ P  +TYNT+     +   +  A +L D+M   ++ 
Sbjct: 544 KGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE 603

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              +TYN  IDGLC+ G + +A  +  +L+     L   AY+ +I   C  G  + A ++
Sbjct: 604 PTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKV 663

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G   ++  Y+ +I+  C    +++A   F  M + GV+P+   F  ++    R
Sbjct: 664 FHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHR 723

Query: 243 NNETSKVVELLHRM 256
                 V ELL  M
Sbjct: 724 AGHVHSVFELLAVM 737



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 117/225 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA RL   +  + + P+   +++LI GFC   ++  AR L  S+ ++G   + VTY T
Sbjct: 447 VEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTT 506

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N YC+  ++ +   L  EM  K I PTVVTY  +  GL +  ++E +++L ++M+   
Sbjct: 507 LMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  TYNT I   CK   + +A EL   + +   E     Y+ LIDGLC+ G +E A 
Sbjct: 567 LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDAD 626

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            +  SL    +    V Y  MI   C  G   +A  +F  M  KG
Sbjct: 627 RVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG 671



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 124/259 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A    D +I   +RP+  +Y+ +IDG+   G+++ A  L+  +       ++VT+N+
Sbjct: 412 LSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK + V E+  L   +   G+ P+ VTY TL +   E   +    +L  EM   D
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I GLCK   + E+ +L   +R          Y+ +I   CK   +  A+
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +    L P   TYN++I G C  G ++ A  + + ++ + +    V + T++   
Sbjct: 592 ELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAH 651

Query: 241 IRNNETSKVVELLHRMDER 259
               +  + V++ H+M E+
Sbjct: 652 CVKGDAQRAVKVFHQMVEK 670



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 5/245 (2%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   +A   S ++DG C       A       D      +VV++NT+++ YCK    + +
Sbjct: 145 GTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVA 204

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
            + +  ML  GI P   +YN L HGL     +E AL+L ++M+   +  +  TY     G
Sbjct: 205 KSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKG 264

Query: 135 LCKNGYIVEAAELFRTLRV---LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
               G +  A E+ + +     LK +L    Y+ LI G C++G +E A  L + L   G 
Sbjct: 265 FHLLGLMSGAREIIQKMLTDEGLKPDL--VTYTVLICGHCQMGNIEEALRLRRDLLSSGF 322

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             NV+ Y++++   C  GQ+D+A  L  +MEA  + P+ VT++ L+ G  +  +  + ++
Sbjct: 323 QLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQ 382

Query: 252 LLHRM 256
           L   M
Sbjct: 383 LYKEM 387



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 90/172 (52%), Gaps = 3/172 (1%)

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           ++ V ++L +  +M  + +RP++ TYN+L   L+ +   +    ++++++ S       T
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSL---LYNLRHTDIMWDVYNDIKDSGTPQSART 152

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
            +  +DGLC      +A    R     +    + +++ ++   CK+G  + A   F  + 
Sbjct: 153 SSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + G++P+  +YNI+IHG    G M++A +L  DME +G+ P+ VT+  +  G
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKG 264



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 4/251 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M ++ +RP+   Y++L+     T   D   +++  +  +G   +  T + +++G C    
Sbjct: 109 MKEQNLRPSIQTYNSLLYNLRHT---DIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSR 165

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             +++    +   K   P+VV++NT+     ++   + A   F  M    +  +T +YN 
Sbjct: 166 FRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNI 225

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS-LPRV 189
            I GL   G + EA EL   +     +  +  Y  +  G   +G +  A E+ Q  L   
Sbjct: 226 LIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDE 285

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           GL P++VTY ++I G C  G +++A  L  D+ + G   N + ++ L+    +  +  + 
Sbjct: 286 GLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEA 345

Query: 250 VELLHRMDERN 260
           ++LL+ M+  N
Sbjct: 346 LQLLYEMEANN 356



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 90/192 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E+ +LL+ M  +G+ P+   Y+T+I  FC   ++ +A EL   M I+       TYN 
Sbjct: 552 LEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNV 611

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+  DVE++  +   +  + I  T V Y T+          + A+K+F +M    
Sbjct: 612 LIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG 671

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y+  I+ LCK   I EA   F  +         E +  +++   + G + + +
Sbjct: 672 FEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVF 731

Query: 181 ELFQSLPRVGLM 192
           EL   + + GL+
Sbjct: 732 ELLAVMIKFGLL 743


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 142/310 (45%), Gaps = 51/310 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L + M    V P+ F Y+ LID FC  G + +AR+ F  M  +GC  NVVTY  
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HS 119
           LI+ Y K + +  +  L+  MLS+G  P VVTY  L  G  +  Q+E A +++  M+ ++
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 120 DVA---------------AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           D+                    TY   +DGLCK   + EA +L   + V  CE     Y 
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI------------------------ 200
            LIDG CK+GKL+ A  +F  +   G  PNV TY+                         
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735

Query: 201 -----------MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
                      MI G C  G+ D+A+ L   ME KG  PN VT+  ++ G  +  +  K 
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795

Query: 250 VELLHRMDER 259
           +EL+ +M  +
Sbjct: 796 LELMRQMGAK 805



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH------- 53
           M  A+ L ++M+  G  PN   Y+ LIDG C +G+I++A +++  M  N  +        
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 54  ---------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
                    N+ TY  L++G CK   V+E+ +L   M  +G  P  + Y+ L  G  ++ 
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +++ A  +F +M          TY++ ID L K+  +  A ++   +    C   +  Y+
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +IDGLCK+GK + A+ L   +   G  PNVVTY  MI GF   G++DK  +L   M AK
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G APN VT+  L+  C          +LL  M +
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 136/275 (49%), Gaps = 16/275 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  ++  M+ +G  P+   YS +I   C   ++D A  LF  M  N  + +V TY  L
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   ++++   + EM+  G  P VVTY  L H   +  ++  A +LF+ M     
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLR----------VLKCELG------IEAYSC 165
                TY   IDG CK+G I +A +++  +R            K + G      I  Y  
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGA 641

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DGLCK  K++ A +L   +   G  PN + Y+ +I GFC  G++D+A  +F  M  +G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             PN  T+++L+    ++      +++L RM E +
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 6/257 (2%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L +MI  G  P+  ++++LI  +C +G+   A +L   M   GC    V YN LI G 
Sbjct: 355 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI 414

Query: 66  CKTKDV------EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           C  + +      E +   Y EML   +    V  + L   L    + E A  +  EM   
Sbjct: 415 CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK 474

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +TSTY+  I  LC    +  A  LF  ++       +  Y+ LID  CK+G L+ A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + F  + R G  PNVVTY  +IH +    +M  A++LF  M ++G  PN VT+  L+ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 240 CIRNNETSKVVELLHRM 256
             ++ +  K  ++  RM
Sbjct: 595 HCKSGQIEKACQIYARM 611



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 128/322 (39%), Gaps = 70/322 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LLD+M   G  PN  VY  LIDGFC  G++D A+ +F  M   G   NV TY++
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K K ++ +L + S ML     P V+ Y  +  GL ++ + + A +L   M+   
Sbjct: 712 LIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   IDG  K G + +  EL R +    C      Y  LI+  C  G L+ A 
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAH 831

Query: 181 ELFQSLPR------------------------VGLM---------PNVVTYNIMIHGFCN 207
           +L   + +                        +GL+         P +  Y I+I  FC 
Sbjct: 832 QLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891

Query: 208 DGQM-------------------------------------DKAHDLFLDMEAKGVAPNC 230
            G++                                     DKA +L+ DM  +G  P  
Sbjct: 892 AGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPEL 951

Query: 231 VTFNTLMLGCIRNNETSKVVEL 252
             F  L+ G IR N   + ++L
Sbjct: 952 SIFFYLVKGLIRINRWEEALQL 973



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 16/265 (6%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+   V  N    S L    C  G+ ++A  +   M   G + +  TY+ +I   C    
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+ +  L+ EM S  + P V TY  L     ++  ++ A K FDEM     A    TY  
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF------Q 184
            I    K   +  A ELF  +    C   +  Y+ LIDG CK G++E A +++       
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 185 SLPRVGLM----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            +P V +           PN+ TY  ++ G C   ++ +A DL   M  +G  PN + ++
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 235 TLMLGCIRNNETSKVVELLHRMDER 259
            L+ G  +  +  +   +  +M ER
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSER 700



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 100/268 (37%), Gaps = 44/268 (16%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   G   + +     +   C  G   R RE    ++      + V Y  +I+G C+   
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEASL 314

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            EE+++  S M S    P VVTY  L  G     Q+    ++   M           +N+
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG--------------------- 169
            I   C++G    A +L + +    C+ G   Y+ LI G                     
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 170 --------------------LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
                               LC  GK E A+ + + +   G +P+  TY+ +I   CN  
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++D A  LF +M++  V P+  T+  L+
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILI 522



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 3/200 (1%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI   C+      +L     +   G +P+ +TYN L     E  +++ A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S    +  T   F+  LCK G   EA  L         +L    Y+ +I GLC+    E 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEE 317

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +    +     +PNVVTY I++ G     Q+ +   +   M  +G  P+   FN+L+ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 239 GCIRNNETSKVVELLHRMDE 258
              R+ + S   +LL +M +
Sbjct: 378 AYCRSGDYSYAYKLLKKMGD 397


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +   L+D M++    PN   ++TLI   C  G  +R  E+   M  +GC  ++  Y T+I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +E +  + + M S G++P VV YNT+  GL    + + A +L  EM   D  
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +D  C+NG +    EL   +    C   +  Y+ +I+G CK G ++ A  L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +S+   G  PN V+Y I++ G C+ G+   A +L   M  +G  PN VTFNTL+    +
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 243 NNETSKVVELLHRM 256
                + +ELL +M
Sbjct: 474 KGLVEQAIELLKQM 487



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 131/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  M Q+    +   ++ L+D FC  G +DR  EL   M  +GCM +V+TY T+I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK   ++E++ L   M S G +P  V+Y  +  GL    +   A +L  +M      
Sbjct: 399 NGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP 458

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT I+ LCK G + +A EL + + V  C   + +YS +IDGL K GK E A EL
Sbjct: 459 PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ PN + Y+ +      +G+++K   +F +++   +  + V +N ++    +
Sbjct: 519 LNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCK 578

Query: 243 NNETSKVVELLHRM 256
             ET + ++    M
Sbjct: 579 RWETDRAIDFFAYM 592



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 132/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G  P+  +Y+T+IDG C  G ++ A E+   M   G   NVV YNT++ G C
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             +  +E+  L SEM  K      VT+N L     +   V+  ++L ++M       +  
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T I+G CK G I EA  L +++    C+    +Y+ ++ GLC  G+   A EL   +
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + G  PN VT+N +I+  C  G +++A +L   M   G +P+ ++++T++ G  +  +T
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 247 SKVVELLHRM 256
            + +ELL+ M
Sbjct: 513 EEALELLNVM 522



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 131/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+ +L+ M   G++PN   Y+T++ G C       A EL   M    C  + VT+N 
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +C+   V+  + L  +MLS G  P V+TY T+ +G  +   ++ A+ L   M    
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T +Y   + GLC  G  V+A EL   +    C      ++ LI+ LCK G +E A 
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + +   G  P++++Y+ +I G    G+ ++A +L   M  KG++PN + ++++    
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541

Query: 241 IRNNETSKVVELLHRMDE 258
            R    +KV+++   + +
Sbjct: 542 SREGRVNKVIQMFDNIKD 559



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M  +G  P   +Y  +++  C +G    +  +  +M   GC  +    N ++
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C+   V+E++ L  ++   G    +V+YN +  GL    +     +L DEM   D A
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT I  LC+NG      E+   +    C   I  Y+ +IDG+CK G LE A E+
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +P  GL PNVV YN ++ G C+  +  +A +L  +M  K    + VTFN L+    +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 243 NNETSKVVELLHRM 256
           N    +V+ELL +M
Sbjct: 369 NGLVDRVIELLEQM 382



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 116/225 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M   G +PN   Y+ ++ G C  G    A EL   M   GC  N VT+NT
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   VE+++ L  +ML  G  P +++Y+T+  GL +  + E AL+L + M +  
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  T  Y++    L + G + +  ++F  ++          Y+ +I  LCK  + + A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           + F  +   G MPN  TY ++I G  ++G   +A +L  ++ ++G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 126/262 (48%), Gaps = 18/262 (6%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L+ M  +G   +    + +++  C  G +D A  L   +   GC  ++V+YN ++ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 66  CKTK---DVEESLNLYSEMLSKGIRPTVVTYNTLF-----HGLFE-IHQVEHALKLFDEM 116
           C  K   DVEE   L  EM+     P +VT+NTL      +GLFE +H+V        +M
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV------LAQM 277

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                  +   Y T IDG+CK G++  A E+   +     +  +  Y+ ++ GLC   + 
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A EL   + +     + VT+NI++  FC +G +D+  +L   M + G  P+ +T+ T+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           + G  +     + V LL  M  
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSS 419



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 110/245 (44%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PNA+ +  ++ G C  G I  A E+   M   GC      Y+ ++   C++     S+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            +   M +KG        N + + + E   V+ A+ L  ++      A+  +YN  + GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C      +  EL   +  + C   I  ++ LI  LC+ G  E   E+   +   G  P++
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
             Y  +I G C +G ++ A+++   M + G+ PN V +NT++ G        +  ELL  
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 256 MDERN 260
           M +++
Sbjct: 347 MFQKD 351



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 32/234 (13%)

Query: 55  VVTYNTLINGYCKTKD--------------------------------VEESLNLYSEML 82
           VV YN ++ GYC+                                   + ++L +  EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG  P    Y+ +           +++++ + M       +T   N  ++ +C+ G + 
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA  L R L    CE  I +Y+ ++ GLC   +     EL   + RV   PN+VT+N +I
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              C +G  ++ H++   M   G  P+   + T++ G  +        E+L+RM
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 3/100 (3%)

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           + AY+ ++ G C+ G+L  A  L  ++P   + PN  T+  ++ G C  G++  A ++  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +M  KG AP    ++ ++    R+      V +L  M  +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAK 175


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +   L+D M++    PN   ++TLI   C  G  +R  E+   M  +GC  ++  Y T+I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +E +  + + M S G++P VV YNT+  GL    + + A +L  EM   D  
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  +D  C+NG +    EL   +    C   +  Y+ +I+G CK G ++ A  L
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +S+   G  PN V+Y I++ G C+ G+   A +L   M  +G  PN VTFNTL+    +
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 243 NNETSKVVELLHRM 256
                + +ELL +M
Sbjct: 474 KGLVEQAIELLKQM 487



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 131/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  M Q+    +   ++ L+D FC  G +DR  EL   M  +GCM +V+TY T+I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK   ++E++ L   M S G +P  V+Y  +  GL    +   A +L  +M      
Sbjct: 399 NGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP 458

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT I+ LCK G + +A EL + + V  C   + +YS +IDGL K GK E A EL
Sbjct: 459 PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ PN + Y+ +      +G+++K   +F +++   +  + V +N ++    +
Sbjct: 519 LNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCK 578

Query: 243 NNETSKVVELLHRM 256
             ET + ++    M
Sbjct: 579 RWETDRAIDFFAYM 592



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 132/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G  P+  +Y+T+IDG C  G ++ A E+   M   G   NVV YNT++ G C
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             +  +E+  L SEM  K      VT+N L     +   V+  ++L ++M       +  
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T I+G CK G I EA  L +++    C+    +Y+ ++ GLC  G+   A EL   +
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + G  PN VT+N +I+  C  G +++A +L   M   G +P+ ++++T++ G  +  +T
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 247 SKVVELLHRM 256
            + +ELL+ M
Sbjct: 513 EEALELLNVM 522



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 131/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+ +L+ M   G++PN   Y+T++ G C       A EL   M    C  + VT+N 
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +C+   V+  + L  +MLS G  P V+TY T+ +G  +   ++ A+ L   M    
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T +Y   + GLC  G  V+A EL   +    C      ++ LI+ LCK G +E A 
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + +   G  P++++Y+ +I G    G+ ++A +L   M  KG++PN + ++++    
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541

Query: 241 IRNNETSKVVELLHRMDE 258
            R    +KV+++   + +
Sbjct: 542 SREGRVNKVIQMFDNIKD 559



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M  +G  P   +Y  +++  C +G    +  +  +M   GC  +    N ++
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  C+   V+E++ L  ++   G    +V+YN +  GL    +     +L DEM   D A
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+NT I  LC+NG      E+   +    C   I  Y+ +IDG+CK G LE A E+
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +P  GL PNVV YN ++ G C+  +  +A +L  +M  K    + VTFN L+    +
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368

Query: 243 NNETSKVVELLHRM 256
           N    +V+ELL +M
Sbjct: 369 NGLVDRVIELLEQM 382



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 116/225 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M   G +PN   Y+ ++ G C  G    A EL   M   GC  N VT+NT
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   VE+++ L  +ML  G  P +++Y+T+  GL +  + E AL+L + M +  
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  T  Y++    L + G + +  ++F  ++          Y+ +I  LCK  + + A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           + F  +   G MPN  TY ++I G  ++G   +A +L  ++ ++G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 126/262 (48%), Gaps = 18/262 (6%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L+ M  +G   +    + +++  C  G +D A  L   +   GC  ++V+YN ++ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 66  CKTK---DVEESLNLYSEMLSKGIRPTVVTYNTLF-----HGLFE-IHQVEHALKLFDEM 116
           C  K   DVEE   L  EM+     P +VT+NTL      +GLFE +H+V        +M
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV------LAQM 277

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                  +   Y T IDG+CK G++  A E+   +     +  +  Y+ ++ GLC   + 
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A EL   + +     + VT+NI++  FC +G +D+  +L   M + G  P+ +T+ T+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           + G  +     + V LL  M  
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSS 419



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 110/245 (44%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PNA+ +  ++ G C  G I  A E+   M   GC      Y+ ++   C++     S+
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            +   M +KG        N + + + E   V+ A+ L  ++      A+  +YN  + GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C      +  EL   +  + C   I  ++ LI  LC+ G  E   E+   +   G  P++
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
             Y  +I G C +G ++ A+++   M + G+ PN V +NT++ G        +  ELL  
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 256 MDERN 260
           M +++
Sbjct: 347 MFQKD 351



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 32/234 (13%)

Query: 55  VVTYNTLINGYCKTKD--------------------------------VEESLNLYSEML 82
           VV YN ++ GYC+                                   + ++L +  EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG  P    Y+ +           +++++ + M       +T   N  ++ +C+ G + 
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA  L R L    CE  I +Y+ ++ GLC   +     EL   + RV   PN+VT+N +I
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              C +G  ++ H++   M   G  P+   + T++ G  +        E+L+RM
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312



 Score = 40.4 bits (93), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 3/100 (3%)

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           + AY+ ++ G C+ G+L  A  L  ++P   + PN  T+  ++ G C  G++  A ++  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +M  KG AP    ++ ++    R+      V +L  M  +
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAK 175


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 148/279 (53%), Gaps = 19/279 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           M +A+ L++   +  V+ +   Y+TL+  FC TG++ RA  LF  +              
Sbjct: 248 MSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNND 307

Query: 47  -----DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
                +I      +VTY TLI  YCK   VEES +LY +M+  GI P VVT +++ +G  
Sbjct: 308 VVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFC 367

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
              ++  A  LF EM    +     +Y T I+ L K+G ++EA  L   + V      I 
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             + ++DGL K+GK + A E+F+++ ++ L PN VTY+ ++ G+C  G+M+ A  +   M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           E + V PN +TF++++ G  +    SK V++L  M +RN
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 130/246 (52%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           + ++P    Y+TLI  +C    ++ +  L+  M +NG M +VVT ++++ G+C+   + E
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +  L+ EM   G+ P  V+Y T+ + LF+  +V  A  L  +M    ++ +  T  T +D
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GL K G   EA E+F T+  L        YS L+DG CK+GK+E A  + Q + +  + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV+T++ +I+G+   G + KA D+  +M  + V PN + +  L+ G  +  E     +  
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 254 HRMDER 259
             M  R
Sbjct: 555 KEMKSR 560



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E+  L   MI  G+ P+    S+++ GFC  G++  A  LF  M   G   N V+Y T
Sbjct: 337 VEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYAT 396

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN   K+  V E+ NL S+M+ +GI   +VT  T+  GLF++ + + A ++F+ +   +
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN 456

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TY+  +DG CK G +  A  + + +        +  +S +I+G  K G L  A 
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHG------------FCND-------------------- 208
           ++ + + +  +MPN + Y I+I G            FC +                    
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNL 576

Query: 209 ---GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              G+MD+A  L +DM +KG+ P+ V + +L+ G  +       + ++  M E+N
Sbjct: 577 KRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 631



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 131/272 (48%), Gaps = 36/272 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + + +++  + PN   YS L+DG+C  G+++ A  +   M+      NV+T++++I
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE-------------------- 102
           NGY K   + +++++  EM+ + + P  + Y  L  G F+                    
Sbjct: 504 NGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE 563

Query: 103 ---------------IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                          + +++ A  L  +M    +  +   Y + IDG  K G  + A  +
Sbjct: 564 ESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSI 623

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
            + ++       + AY+ LI GL ++GK +  + +   +  +GL P+ +TYN +I+ +C 
Sbjct: 624 VQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCI 682

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            G+ + A D+  +M++ G+ PN VT+N L+ G
Sbjct: 683 KGKTEDALDILNEMKSYGIMPNAVTYNILIGG 714



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 125/288 (43%), Gaps = 40/288 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT-- 68
           MI+ G+ P+   Y+T+I+ +C+ G+ + A ++   M   G M N VTYN LI G CKT  
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGF 720

Query: 69  ----------------------------KDVEESLNL------YSEMLSKGIRPTVVTYN 94
                                       K V   L L        EM+ +GI   +VTYN
Sbjct: 721 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYN 780

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            L  G      VE ALK + +M    +A   +TYNT + GL   G + E  E    L   
Sbjct: 781 ALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSE 840

Query: 155 KCELGI----EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
             E G+      Y  L+ G  ++G  +    L   +   G +P + TYN++I  +   G+
Sbjct: 841 MNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGK 900

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           M +A +L  D+  KG  PN  T++ L  G +  +   ++   L R  E
Sbjct: 901 MIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYE 948



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 19/256 (7%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+T+I GFC  G +D+   L   M   G   + +T N L+ GYC+   V+ +  +   ++
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV 224

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
             G+   V+  NTL  G  E   +  A +L +    SDV  +  TYNT +   CK G + 
Sbjct: 225 DGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLT 284

Query: 143 EAAELFRTL-------------------RVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            A  LF  +                    +   +  +  Y+ LI   CK   +E +  L+
Sbjct: 285 RAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLY 344

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+MP+VVT + +++GFC  G++ +A  LF +M   G+ PN V++ T++    ++
Sbjct: 345 KKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKS 404

Query: 244 NETSKVVELLHRMDER 259
               +   L  +M  R
Sbjct: 405 GRVMEAFNLQSQMVVR 420



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 10/244 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  L+  M  +G+ P+   Y++LIDG+   G    A  +   M       +VV YN 
Sbjct: 582 MDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNA 641

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +    +    + S M+  G+ P  +TYNT+ +      + E AL + +EM+   
Sbjct: 642 LIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYG 700

Query: 121 VAAETSTYNTFIDGLCKNGYI---VEAAELFRTL-RVLKCELGIEAYSCLI-DGLCKIGK 175
           +     TYN  I GLCK G++   +    L +   R  K +  ++ +  L+  GL    +
Sbjct: 701 IMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL----E 756

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           L+    +   + + G+  ++VTYN +I G+C    ++KA   +  M   G+APN  T+NT
Sbjct: 757 LKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNT 816

Query: 236 LMLG 239
           L+ G
Sbjct: 817 LLGG 820



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 21/263 (7%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV P+ F  + L+   C  G++D A     + D+     + VTYNT+I G+C+   V++ 
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKGLVDQG 181

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L SEM+ +G+    +T N L  G   I  V++A  +   +    V  +    NT IDG
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL-------P 187
            C+   + +A EL         ++ I  Y+ L+   CK G L  A  LF  +        
Sbjct: 242 YCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDED 301

Query: 188 RV------------GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           R+             L P +VTY  +I  +C    ++++H L+  M   G+ P+ VT ++
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361

Query: 236 LMLGCIRNNETSKVVELLHRMDE 258
           ++ G  R+ + ++   L   M E
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYE 384



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 119/240 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M+ RG+  +    +T++DG    G+   A E+F ++       N VTY+ L+
Sbjct: 409 EAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALL 468

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   +E +  +  +M  + + P V+T++++ +G  +   +  A+ +  EM   +V 
Sbjct: 469 DGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVM 528

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T  Y   IDG  K G    A +  + ++  + E     +  L++ L ++G+++ A  L
Sbjct: 529 PNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSL 588

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ P++V Y  +I G+  +G    A  +  +M+ K +  + V +N L+ G +R
Sbjct: 589 IIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLR 648



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 112/266 (42%), Gaps = 43/266 (16%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTG--------------------------- 34
           ++A  +L+ M   G+ PNA  Y+ LI G C TG                           
Sbjct: 687 EDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQI 746

Query: 35  ---------EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                    E+ R + +   M   G   ++VTYN LI GYC    VE++L  YS+M   G
Sbjct: 747 HEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 806

Query: 86  IRPTVVTYNTLFHGL----FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           I P + TYNTL  GL         +E   KL  EM    +    +TY+  + G  + G  
Sbjct: 807 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNR 866

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            +   L   +        ++ Y+ LI    K GK+  A EL   L   G +PN  TY+I+
Sbjct: 867 KKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 926

Query: 202 IHGFCN---DGQMDKAHDLFLDMEAK 224
             G+ N   + ++D++     ++E K
Sbjct: 927 TCGWLNLSYEPEIDRSLKRSYEIEVK 952



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 8/237 (3%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           + TLI  +        A   F  M   G +  +  +NTL+  +  +  V +   +YS+ML
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA-AETSTYNTFIDGLCKNGYI 141
             G+ P V + N L H L ++  ++ AL     ++++DV   +  TYNT I G C+ G +
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGY---LRNNDVVDIDNVTYNTVIWGFCQKGLV 178

Query: 142 VEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            +   L   +  +K  L  ++ +C  L+ G C+IG ++ A  +  +L   G+  +V+  N
Sbjct: 179 DQGFGLLSEM--VKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +I G+C    M +A +L  +     V  + VT+NTL+    +  + ++   L + +
Sbjct: 237 TLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEI 293



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 3/122 (2%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +L+  M +RG+ PNA  Y  L+ G+   G   +   L + M   G +  + TYN LI+ Y
Sbjct: 836 KLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 895

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH---QVEHALKLFDEMQHSDVA 122
            K+  + E+  L +++L+KG  P   TY+ L  G   +    +++ +LK   E++   + 
Sbjct: 896 AKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLL 955

Query: 123 AE 124
            E
Sbjct: 956 IE 957


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 142/260 (54%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L    ++    P+ + ++ LI G C  GEID+A E F +M   GC  ++V+YNT
Sbjct: 195 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 254

Query: 61  LINGYCKTKDVEESLNLYSE-MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LING+C+  ++ +  +L  E ML KG+ P V+TY ++  G  ++  ++ A +LFDEM  S
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     T+N  IDG  K G +  A  ++  + +L C   +  ++ LIDG C+ G++   
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L++ +    L PNV TY ++I+  C + ++ +A +    +++  V P    +N ++ G
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 434

Query: 240 CIRNNETSKVVELLHRMDER 259
             +  +  +   ++  M E+
Sbjct: 435 FCKAGKVDEANFIVAEMQEK 454



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 137/261 (52%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYN 59
           +D+A      M   G  P+   Y+TLI+GFC   EI +  +L    M I G   +V+TY 
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++I+GYCK  D++ +  L+ EM+S GI+P   T+N L  G  ++  +  A+ ++++M   
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+ + IDG C+ G + +  +L+  ++V      +  Y+ LI+ LCK  ++  A
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
               + L    ++P    YN +I GFC  G++D+A+ +  +M+ K   P+ +TF  L++G
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469

Query: 240 CIRNNETSKVVELLHRMDERN 260
                   + +   ++M E N
Sbjct: 470 NCMKGRMVEAISTFYKMIEIN 490



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 3/244 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +GV P+   Y+++I G+C  G++  A ELF  M  +G   N  T+N LI+G+ K  +
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGN 335

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  ++ +Y +ML  G  P VVT+ +L  G     +V   LKL++EM+  +++    TY  
Sbjct: 336 MRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAV 395

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+ LCK   I EA    R L+  +       Y+ +IDG CK GK++ A  +   +    
Sbjct: 396 LINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKK 455

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL---MLGCIRNNETS 247
             P+ +T+ I+I G C  G+M +A   F  M      P+ +T N+L   +L     NE S
Sbjct: 456 CRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEAS 515

Query: 248 KVVE 251
           ++ +
Sbjct: 516 QIKQ 519



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  + D M   G+ P++ +   L+  +   G++D A+     +   G   +   YN L
Sbjct: 126 DSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNL 185

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +N   K   V+E++ L+ E L     P V ++N L  GL  I +++ A + F  M +   
Sbjct: 186 LNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGC 245

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAW 180
             +  +YNT I+G C+   I +  +L +   ++K     +  Y+ +I G CK+G ++ A 
Sbjct: 246 FPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAAS 305

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +   G+ PN  T+N++I GF   G M  A  ++  M   G  P+ VTF +L+ G 
Sbjct: 306 ELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGY 365

Query: 241 IRNNETSKVVELLHRMDERN 260
            R  E ++ ++L   M  RN
Sbjct: 366 CREGEVNQGLKLWEEMKVRN 385



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 113/217 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  AS L D M+  G++PN F ++ LIDGF   G +  A  ++  M + GC+ +VVT+ +
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC+  +V + L L+ EM  + + P V TY  L + L + +++  A      ++ S+
Sbjct: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   YN  IDG CK G + EA  +   ++  KC      ++ LI G C  G++  A 
Sbjct: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             F  +  +  +P+ +T N +I      G  ++A  +
Sbjct: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 1/218 (0%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y  L+   C  G  D A+ +F  M  +G + +      L++ Y +   ++ + N  +E+ 
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH 171

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
             GI+ +   YN L + L + + V+ A+ LF E        +  ++N  I GLC+ G I 
Sbjct: 172 CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEID 231

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF-QSLPRVGLMPNVVTYNIM 201
           +A E F+ +    C   I +Y+ LI+G C++ ++    +L  + +   G+ P+V+TY  +
Sbjct: 232 KAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI 291

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           I G+C  G M  A +LF +M + G+ PN  TFN L+ G
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 1/205 (0%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           H   TY+ L+   CK    + +  ++  M S GI P       L      + +++ A   
Sbjct: 107 HTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNF 166

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
            +E+    +      YN  ++ L K   + EA  LFR          + +++ LI GLC+
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL-DMEAKGVAPNCV 231
           IG+++ A+E FQ++   G  P++V+YN +I+GFC   ++ K HDL   DM  KGV+P+ +
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI 286

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T+ +++ G  +  +     EL   M
Sbjct: 287 TYTSIISGYCKLGDMKAASELFDEM 311



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 84/185 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + + M+  G  P+   +++LIDG+C  GE+++  +L+  M +     NV TY  
Sbjct: 336 MRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAV 395

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   + E+ N    + S  + P    YN +  G  +  +V+ A  +  EMQ   
Sbjct: 396 LINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKK 455

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+   I G C  G +VEA   F  +  + C       + LI  L K G    A 
Sbjct: 456 CRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEAS 515

Query: 181 ELFQS 185
           ++ Q+
Sbjct: 516 QIKQA 520



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 82/169 (48%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
            I  T  TY+ L   L ++   + A  +FD M+   +  ++S     +    + G +  A
Sbjct: 104 SINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                 +     ++    Y+ L++ L K   ++ A  LF+       +P+V ++NI+I G
Sbjct: 164 KNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRG 223

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            C  G++DKA + F +M   G  P+ V++NTL+ G  R NE SK  +LL
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL 272



 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+ ++  M ++  RP+   ++ LI G C+ G +  A   F  M    C+ + +T N+
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINS 500

Query: 61  LINGYCKTKDVEESLNLYSEMLSK 84
           LI+   K     E+  +    L K
Sbjct: 501 LISCLLKAGMPNEASQIKQAALQK 524


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 141/262 (53%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           MD A  LL+ MIQ    V P+   ++++I G C  G + +A  +   M   GCM N+VTY
Sbjct: 306 MDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTY 365

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI G+ +   V  ++NL SE++S G+ P   TY+ L +G  ++ +V+ A      M  
Sbjct: 366 NYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQ 425

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             + AE   Y   +  LC+ G + +A  LF  +  + C L   AYS ++ G CK G ++ 
Sbjct: 426 RGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKA 484

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +L Q +   GL P+ VTY+I+I+ F   G +++A  +   M A G  P+   F++L+ 
Sbjct: 485 AKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIK 544

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G     + +K+++L+H M  +N
Sbjct: 545 GYSAEGQINKILDLIHEMRAKN 566



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 4/249 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
             RPNA  Y+ ++ G C +   D A  L  SM  +G   +VVTY TLI G C   +++ +
Sbjct: 110 AARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGA 169

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L  EM   G+ P V+ Y+ L  G     + +   K+F+EM    V  +   +  FID 
Sbjct: 170 LELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDD 229

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G I +A ++   +     E  +  Y+ LI+ LCK G +  A  L   +   G+ P+
Sbjct: 230 LCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPD 289

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG---VAPNCVTFNTLMLGCIRNNETSKVVE 251
           VVTYN +I G     +MD A  L  +M  +G   V P+ VTFN+++ G  +     + + 
Sbjct: 290 VVTYNTLIAGLSGVLEMDGAMGLLEEM-IQGDTLVEPDVVTFNSVIHGLCKIGRMRQAIS 348

Query: 252 LLHRMDERN 260
           +   M ER 
Sbjct: 349 VREMMAERG 357



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 131/257 (50%), Gaps = 2/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           + S++ + M + GV P+  +++  ID  C  G I +A ++   M   G   NVVTYN LI
Sbjct: 203 DVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLI 262

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-- 120
           N  CK   V E+L L +EM  KG+ P VVTYNTL  GL  + +++ A+ L +EM   D  
Sbjct: 263 NCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTL 322

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+N+ I GLCK G + +A  +   +    C   +  Y+ LI G  ++ K+  A 
Sbjct: 323 VEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAM 382

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   L   GL P+  TY+I+I+GF    ++D+A      M  +G+      +  L+   
Sbjct: 383 NLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAAL 442

Query: 241 IRNNETSKVVELLHRMD 257
            +     + + L + MD
Sbjct: 443 CQLGMMEQAMVLFNEMD 459



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 128/242 (52%), Gaps = 4/242 (1%)

Query: 19  NAFVYSTLIDGFCLTG-EIDRARELFVSMDING---CMHNVVTYNTLINGYCKTKDVEES 74
           +A  Y+ ++   C  G ++ +A  L   M          N V+Y  ++ G C ++  +E+
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + L   M + G+R  VVTY TL  GL +  +++ AL+L  EM  S V      Y+  + G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            C++G   + +++F  +  L  E  +  ++  ID LCK G++  A ++   + + GL PN
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTYN++I+  C +G + +A  L  +M+ KGVAP+ VT+NTL+ G     E    + LL 
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 255 RM 256
            M
Sbjct: 315 EM 316



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  LL  M   GVR +   Y TLI G C   E+D A EL   M  +G   NV+ Y+ L
Sbjct: 132 DEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCL 191

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + GYC++   ++   ++ EM   G+ P V+ +      L +  ++  A+K+ D M    +
Sbjct: 192 LRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGL 251

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  I+ LCK G + EA  L   +        +  Y+ LI GL  + +++ A  
Sbjct: 252 EPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMG 311

Query: 182 LFQSLPRVGLM--PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L + + +   +  P+VVT+N +IHG C  G+M +A  +   M  +G   N VT+N L+ G
Sbjct: 312 LLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGG 371

Query: 240 CIRNNETSKVVELLHRM 256
            +R ++ +  + L+  +
Sbjct: 372 FLRVHKVNMAMNLMSEL 388



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 134/264 (50%), Gaps = 6/264 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M   GV PN  VYS L+ G+C +G      ++F  M   G   +V+ +  
Sbjct: 166 LDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTG 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+  CK   + +++ +   M+ +G+ P VVTYN L + L +   V  AL L +EM    
Sbjct: 226 FIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKG 285

Query: 121 VAAETSTYNTFIDGLCK----NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           VA +  TYNT I GL      +G +    E+ +   ++  E  +  ++ +I GLCKIG++
Sbjct: 286 VAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLV--EPDVVTFNSVIHGLCKIGRM 343

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  + + +   G M N+VTYN +I GF    +++ A +L  ++ + G+ P+  T++ L
Sbjct: 344 RQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSIL 403

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  +  E  +    L  M +R 
Sbjct: 404 INGFSKLWEVDRAEMFLRTMTQRG 427



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 7/205 (3%)

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQ- 117
            L+N   +   V E+ +L S +    +R   V+YN +   L      +  AL L  +M  
Sbjct: 49  ALLNRRLRAAPVTEACSLLSAL--PDVR-DAVSYNIVLAALCRRGGDLRQALSLLADMSR 105

Query: 118 --HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
             H        +Y   + GLC +    EA  L R+++       +  Y  LI GLC   +
Sbjct: 106 EAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAE 165

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           L+ A EL   +   G+ PNV+ Y+ ++ G+C  G+      +F +M   GV P+ + F  
Sbjct: 166 LDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTG 225

Query: 236 LMLGCIRNNETSKVVELLHRMDERN 260
            +    +     K V++   M +R 
Sbjct: 226 FIDDLCKKGRIGKAVKVKDIMVQRG 250



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +A  YST++ G C +G+I  A++L   M   G   + VTY+ LIN + K  D+EE+  + 
Sbjct: 465 DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVL 524

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            +M + G  P V  +++L  G     Q+   L L  EM+  +VA +     T +
Sbjct: 525 KQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLV 578



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL  M+  G+ P+A  YS LI+ F   G+++ A  +   M  +G + +V  +++LI 
Sbjct: 485 AKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIK 544

Query: 64  GYCKTKDVEESLNLYSEMLSKGI 86
           GY     + + L+L  EM +K +
Sbjct: 545 GYSAEGQINKILDLIHEMRAKNV 567


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 142/311 (45%), Gaps = 51/311 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L + M    V P+ F Y+ LID FC  G + +AR+ F  M  +GC  NVVTY  
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HS 119
           LI+ Y K + +  +  L+  MLS+G  P VVTY  L  G  +  Q+E A +++  M+ ++
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 120 DVA---------------AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           D+                    TY   +DGLCK   + EA +L   + V  CE     Y 
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI------------------------ 200
            LIDG CK+GKL+ A  +F  +   G  PNV TY+                         
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735

Query: 201 -----------MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
                      MI G C  G+ D+A+ L   ME KG  PN VT+  ++ G  +  +  K 
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795

Query: 250 VELLHRMDERN 260
           +EL+ +M  + 
Sbjct: 796 LELMRQMGAKG 806



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH------- 53
           M  A+ L ++M+  G  PN   Y+ LIDG C +G+I++A +++  M  N  +        
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 54  ---------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
                    N+ TY  L++G CK   V+E+ +L   M  +G  P  + Y+ L  G  ++ 
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +++ A  +F +M          TY++ ID L K+  +  A ++   +    C   +  Y+
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +IDGLCK+GK + A+ L   +   G  PNVVTY  MI GF   G++DK  +L   M AK
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G APN VT+  L+  C          +LL  M +
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 136/275 (49%), Gaps = 16/275 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  ++  M+ +G  P+   YS +I   C   ++D A  LF  M  N  + +V TY  L
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   ++++   + EM+  G  P VVTY  L H   +  ++  A +LF+ M     
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLR----------VLKCELG------IEAYSC 165
                TY   IDG CK+G I +A +++  +R            K + G      I  Y  
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGA 641

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DGLCK  K++ A +L   +   G  PN + Y+ +I GFC  G++D+A  +F  M  +G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             PN  T+++L+    ++      +++L RM E +
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 6/257 (2%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L +MI  G  P+  ++++LI  +C +G+   A +L   M   GC    V YN LI G 
Sbjct: 355 RILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI 414

Query: 66  CKTKDV------EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           C  + +      E +   Y EML   +    V  + L   L    + E A  +  EM   
Sbjct: 415 CGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK 474

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +TSTY+  I  LC    +  A  LF  ++       +  Y+ LID  CK+G L+ A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + F  + R G  PNVVTY  +IH +    +M  A++LF  M ++G  PN VT+  L+ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594

Query: 240 CIRNNETSKVVELLHRM 256
             ++ +  K  ++  RM
Sbjct: 595 HCKSGQIEKACQIYARM 611



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 128/322 (39%), Gaps = 70/322 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LLD+M   G  PN  VY  LIDGFC  G++D A+ +F  M   G   NV TY++
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K K ++ +L + S ML     P V+ Y  +  GL ++ + + A +L   M+   
Sbjct: 712 LIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKG 771

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   IDG  K G + +  EL R +    C      Y  LI+  C  G L+ A 
Sbjct: 772 CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAH 831

Query: 181 ELFQSLPR------------------------VGLM---------PNVVTYNIMIHGFCN 207
           +L   + +                        +GL+         P +  Y I+I  FC 
Sbjct: 832 QLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891

Query: 208 DGQM-------------------------------------DKAHDLFLDMEAKGVAPNC 230
            G++                                     DKA +L+ DM  +G  P  
Sbjct: 892 AGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPEL 951

Query: 231 VTFNTLMLGCIRNNETSKVVEL 252
             F  L+ G IR N   + ++L
Sbjct: 952 SIFFYLVKGLIRINRWEEALQL 973



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 16/266 (6%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+   V  N    S L    C  G+ ++A  +   M   G + +  TY+ +I   C    
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+ +  L+ EM S  + P V TY  L     ++  ++ A K FDEM     A    TY  
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF------Q 184
            I    K   +  A ELF  +    C   +  Y+ LIDG CK G++E A +++       
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 185 SLPRVGLM----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            +P V +           PN+ TY  ++ G C   ++ +A DL   M  +G  PN + ++
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+ G  +  +  +   +  +M ER 
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERG 701



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 100/268 (37%), Gaps = 44/268 (16%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   G   + +     +   C  G   R RE    ++      + V Y  +I+G C+   
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEASL 314

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            EE+++  S M S    P VVTY  L  G     Q+    ++   M           +N+
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG--------------------- 169
            I   C++G    A +L + +    C+ G   Y+ LI G                     
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 170 --------------------LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
                               LC  GK E A+ + + +   G +P+  TY+ +I   CN  
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++D A  LF +M++  V P+  T+  L+
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILI 522



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 3/200 (1%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI   C+      +L     +   G +P+ +TYN L     E  +++ A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S    +  T   F+  LCK G   EA  L         +L    Y+ +I GLC+    E 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEE 317

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +    +     +PNVVTY I++ G     Q+ +   +   M  +G  P+   FN+L+ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 239 GCIRNNETSKVVELLHRMDE 258
              R+ + S   +LL +M +
Sbjct: 378 AYCRSGDYSYAYKLLKKMGD 397


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   LD M++RG++P+ + YS LI G     +++ A + +     NG + +V TY+ 
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK +  EE    + EM+SK ++P  V YN L        ++  AL+L ++M+H  
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  ++TY + I G+     + EA  LF  +R+   E  +  Y+ LIDG  K+G++    
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +    + PN +TY +MI G+  DG + +A  L  +M  KG+ P+ +T+   + G 
Sbjct: 749 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++      V+E     DE N
Sbjct: 809 LKQG---GVLEAFKGSDEEN 825



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 133/259 (51%), Gaps = 3/259 (1%)

Query: 5   SRLLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           S+ L+L  Q   +G   +    + L+ G C  G++D A  +   +   GC+ + V+YNTL
Sbjct: 500 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 559

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C  K ++E+     EM+ +G++P   TY+ L  GLF +++VE A++ +D+ + + +
Sbjct: 560 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 619

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+  IDG CK     E  E F  +     +     Y+ LI   C+ G+L  A E
Sbjct: 620 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 679

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G+ PN  TY  +I G     ++++A  LF +M  +G+ PN   +  L+ G  
Sbjct: 680 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 739

Query: 242 RNNETSKVVELLHRMDERN 260
           +  +  KV  LL  M  +N
Sbjct: 740 KLGQMVKVECLLREMHSKN 758



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 124/259 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+   ++ RG   +   Y+TLI G C   ++D A      M   G   +  TY+ 
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 593

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G      VEE++  + +    G+ P V TY+ +  G  +  + E   + FDEM   +
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   T  YN  I   C++G +  A EL   ++          Y+ LI G+  I ++E A 
Sbjct: 654 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 713

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   GL PNV  Y  +I G+   GQM K   L  +M +K V PN +T+  ++ G 
Sbjct: 714 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 773

Query: 241 IRNNETSKVVELLHRMDER 259
            R+   ++   LL+ M E+
Sbjct: 774 ARDGNVTEASRLLNEMREK 792



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L   M + GV PN   ++T+IDG  + G  D A      M   G    ++TY+ 
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G  + K + ++  +  EM  KG  P V+ YN L     E   +  A+++ D M    
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKC--------- 156
           ++  +STYNT I G CKNG    A  L               F ++  L C         
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468

Query: 157 -----------ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                        G    + LI GLCK GK   A EL+      G + +  T N ++HG 
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G++D+A  +  ++  +G   + V++NTL+ GC    +  +    L  M +R
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-----DIN-GCMHN 54
           +++A  + DLM+ +G+   +  Y+TLI G+C  G+ D A  L   M     ++N G   +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453

Query: 55  VVT-----------------------------YNTLINGYCKTKDVEESLNLYSEMLSKG 85
           V+                                TLI+G CK     ++L L+ + L+KG
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                 T N L HGL E  +++ A ++  E+       +  +YNT I G C    + EA 
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                +     +     YS LI GL  + K+E A + +    R G++P+V TY++MI G 
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C   + ++  + F +M +K V PN V +N L+    R+   S  +EL   M  +
Sbjct: 634 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 4/234 (1%)

Query: 26  LIDGFCLTGEIDR---ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           LI+ +C   + D    A ++F  +   G   +  T N L+    +  + ++    + +++
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVV 265

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG+ P V  + T  +   +  +VE A+KLF +M+ + VA    T+NT IDGL   G   
Sbjct: 266 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 325

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA      +     E  +  YS L+ GL +  ++  A+ + + + + G  PNV+ YN +I
Sbjct: 326 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 385

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             F   G ++KA ++   M +KG++    T+NTL+ G  +N +      LL  M
Sbjct: 386 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 439



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 60/121 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L + M   G+ PN F Y+ LIDG+   G++ +   L   M       N +TY  
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GY +  +V E+  L +EM  KGI P  +TY    +G  +   V  A K  DE  ++ 
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 828

Query: 121 V 121
           +
Sbjct: 829 I 829



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 1/151 (0%)

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           AL +F  + +  +    +T N  +  L +     +  E F  +        +  ++  I+
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAIN 281

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
             CK GK+E A +LF  +   G+ PNVVT+N +I G    G+ D+A      M  +G+ P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +T++ L+ G  R         +L  M ++
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKK 372


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 43/292 (14%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+L         P+   Y+ ++ G+C+TG++D AR L   M +     +  TYNTLI
Sbjct: 112 EARRVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLI 163

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C       +L +  +ML +G  P VVTY  L     +    + A+KL DEM+    A
Sbjct: 164 RGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCA 223

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG------------- 169
            +  TYN  ++G+C+ G + +A E  ++L    CE    +Y+ ++ G             
Sbjct: 224 PDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKL 283

Query: 170 ----------------------LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                                 LC+ G +E A E+   +P+ G  PN ++YN ++H FC 
Sbjct: 284 MAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCK 343

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +MD+A      M ++G  P+ V++NTL+    R  E    VELLH++ ++
Sbjct: 344 QKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 139/286 (48%), Gaps = 35/286 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LLD M  +G  P+   Y+ +++G C  G +D A E   S+  +GC  N V+YN ++
Sbjct: 209 QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVL 268

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM------ 116
            G C  +  E++  L +EM  KG  P VVT+N L   L     VE A+++ D++      
Sbjct: 269 KGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCT 328

Query: 117 ----------------QHSDVA-------------AETSTYNTFIDGLCKNGYIVEAAEL 147
                           +  D A              +  +YNT +  LC+ G +  A EL
Sbjct: 329 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVEL 388

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              L+   C   + +Y+ +IDGL K GK + A EL   +   GL P+++TY+ +  G C 
Sbjct: 389 LHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCR 448

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           + ++++A   F  ++  G+ PN V +N ++LG  +  ET   ++L 
Sbjct: 449 EDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLF 494



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 126/250 (50%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +LD M++RG  P+   Y+ L++  C      +A +L   M   GC  +++TYN ++NG C
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGIC 237

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   V++++     + S G  P  V+YN +  GL    + E A KL  EM          
Sbjct: 238 QEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N  I  LC+ G +  A E+   +    C     +Y+ ++   CK  K++ A    + +
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  P++V+YN ++   C  G++D A +L   ++ KG  P  +++NT++ G  +  +T
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 417

Query: 247 SKVVELLHRM 256
            + +ELL+ M
Sbjct: 418 KEALELLNEM 427



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 130/258 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +L+  M Q+G  PN   ++ LI   C  G ++ A E+   +   GC  N ++YN +
Sbjct: 278 EDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK K ++ ++     M+S+G  P +V+YNTL   L    +V+ A++L  +++    
Sbjct: 338 LHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 397

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                +YNT IDGL K G   EA EL   +     +  I  YS +  GLC+  ++E A  
Sbjct: 398 TPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIR 457

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  +  +G+ PN V YN ++ G C   +   A DLF+ M + G  PN  T+  L+ G  
Sbjct: 458 AFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLT 517

Query: 242 RNNETSKVVELLHRMDER 259
                 +  ELL  +  R
Sbjct: 518 YEGLVKEARELLGELCSR 535



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 12/260 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFV--YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           ++EA RL++ M   G+ P+A     + LI   C +G    AR +  +     C  +V+ Y
Sbjct: 75  LEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVLAA-----CEPDVMAY 127

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N ++ GYC T  ++ +  L ++M    + P   TYNTL  GL    +  +AL + D+M  
Sbjct: 128 NAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLR 184

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                +  TY   ++  CK     +A +L   +R   C   I  Y+ +++G+C+ G+++ 
Sbjct: 185 RGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDD 244

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A E  +SLP  G  PN V+YNI++ G C   + + A  L  +M  KG  PN VTFN L+ 
Sbjct: 245 AIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLIS 304

Query: 239 GCIRNNETSKVVELLHRMDE 258
              R       +E+L ++ +
Sbjct: 305 FLCRRGLVEPAMEVLDQIPK 324



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 121/226 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +LD + + G  PN+  Y+ ++  FC   ++DRA      M   GC  ++V+YNT
Sbjct: 312 VEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNT 371

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+  +V+ ++ L  ++  KG  P +++YNT+  GL +  + + AL+L +EM    
Sbjct: 372 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T   GLC+   I EA   F  ++ +        Y+ ++ GLCK  +   A 
Sbjct: 432 LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAI 491

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +LF  +   G MPN  TY I+I G   +G + +A +L  ++ ++GV
Sbjct: 492 DLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 8/172 (4%)

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P     N    GL     +E AL+L + M   + +A        I  LC +G   EA  +
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRV 116

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                   CE  + AY+ ++ G C  G+L+ A  L   +P   + P+  TYN +I G C 
Sbjct: 117 LAA-----CEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCG 168

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            G+   A  +  DM  +G  P+ VT+  L+    + +   + ++LL  M  +
Sbjct: 169 RGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK 220


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 148/279 (53%), Gaps = 19/279 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------- 46
           M +A+ L++   +  V+ +   Y+TL+  FC TG++ RA  LF  +              
Sbjct: 248 MSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNND 307

Query: 47  -----DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
                +I      +VTY TLI  YCK   VEES +LY +M+  GI P VVT +++ +G  
Sbjct: 308 VVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFC 367

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
              ++  A  LF EM    +     +Y T I+ L K+G ++EA  L   + V      I 
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
             + ++DGL K+GK + A E+F+++ ++ L PN VTY+ ++ G+C  G+M+ A  +   M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           E + V PN +TF++++ G  +    SK V++L  M +RN
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 130/246 (52%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           + ++P    Y+TLI  +C    ++ +  L+  M +NG M +VVT ++++ G+C+   + E
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +  L+ EM   G+ P  V+Y T+ + LF+  +V  A  L  +M    ++ +  T  T +D
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GL K G   EA E+F T+  L        YS L+DG CK+GK+E A  + Q + +  + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV+T++ +I+G+   G + KA D+  +M  + V PN + +  L+ G  +  E     +  
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 254 HRMDER 259
             M  R
Sbjct: 555 KEMKSR 560



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E+  L   MI  G+ P+    S+++ GFC  G++  A  LF  M   G   N V+Y T
Sbjct: 337 VEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYAT 396

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN   K+  V E+ NL S+M+ +GI   +VT  T+  GLF++ + + A ++F+ +   +
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN 456

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TY+  +DG CK G +  A  + + +        +  +S +I+G  K G L  A 
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHG------------FCND-------------------- 208
           ++ + + +  +MPN + Y I+I G            FC +                    
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNL 576

Query: 209 ---GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              G+MD+A  L +DM +KG+ P+ V + +L+ G  +       + ++  M E+N
Sbjct: 577 KRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 631



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 135/289 (46%), Gaps = 36/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + + +++  + PN   YS L+DG+C  G+++ A  +   M+      NV+T++++I
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE-------------------- 102
           NGY K   + +++++  EM+ + + P  + Y  L  G F+                    
Sbjct: 504 NGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE 563

Query: 103 ---------------IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                          + +++ A  L  +M    +  +   Y + IDG  K G  + A  +
Sbjct: 564 ESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSI 623

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
            + ++       + AY+ LI GL ++GK +  + +   +  +GL P+ +TYN +I+ +C 
Sbjct: 624 VQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCI 682

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G+ + A D+  +M++ G+ PN VT+N L+ G  +     K    L  M
Sbjct: 683 KGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM 731



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 34/273 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE-------IDRARELFVSMDIN---- 49
           MDEA  L+  M  +G+ P+   Y++LIDG+   G        +   +E  +  D+     
Sbjct: 582 MDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNA 641

Query: 50  -----------------------GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                                  G   + +TYNT+IN YC     E++L++ +EM S GI
Sbjct: 642 LIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P  VTYN L  GL +   VE A    DEM   +      T+   +    ++    +  +
Sbjct: 702 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 761

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +   L     EL +  Y+ LI   C++G    A  +   + + G+  ++VTYN +I G+C
Sbjct: 762 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYC 821

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
               ++KA   +  M   G+APN  T+NTL+ G
Sbjct: 822 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGG 854



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 4/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  +L+ M   G+ PNA  Y+ LI G C TG +++A      M +   +   +T+  L
Sbjct: 687 EDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFL 746

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +  Y +++  ++ L ++ ++++ G+  ++  YNTL      +     A  + DEM    +
Sbjct: 747 VKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGI 806

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG----KLE 177
           +A+  TYN  I G C   ++ +A + +  + V      I  Y+ L+ GL   G     +E
Sbjct: 807 SADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMME 866

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              +L   +   GL+PN  TY+I++ G+   G   K   L ++M  KG  P   T+N L+
Sbjct: 867 ETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 926

Query: 238 LGCIRNNETSKVVELLH 254
               ++ +  +  ELL+
Sbjct: 927 SDYAKSGKMIEARELLN 943



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 19/256 (7%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+T+I GFC  G +D+   L   M   G   + +T N L+ GYC+   V+ +  +   ++
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV 224

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
             G+   V+  NTL  G  E   +  A +L +    SDV  +  TYNT +   CK G + 
Sbjct: 225 DGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLT 284

Query: 143 EAAELFRTL-------------------RVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            A  LF  +                    +   +  +  Y+ LI   CK   +E +  L+
Sbjct: 285 RAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLY 344

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+MP+VVT + +++GFC  G++ +A  LF +M   G+ PN V++ T++    ++
Sbjct: 345 KKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKS 404

Query: 244 NETSKVVELLHRMDER 259
               +   L  +M  R
Sbjct: 405 GRVMEAFNLQSQMVVR 420



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 21/263 (7%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV P+ F  + L+   C  G++D A     + D+     + VTYNT+I G+C+   V++ 
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKGLVDQG 181

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L SEM+ +G+    +T N L  G   I  V++A  +   +    V  +    NT IDG
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL-------P 187
            C+ G + +A EL         ++ I  Y+ L+   CK G L  A  LF  +        
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDED 301

Query: 188 RV------------GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           R+             L P +VTY  +I  +C    ++++H L+  M   G+ P+ VT ++
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361

Query: 236 LMLGCIRNNETSKVVELLHRMDE 258
           ++ G  R+ + ++   L   M E
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYE 384



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 119/240 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M+ RG+  +    +T++DG    G+   A E+F ++       N VTY+ L+
Sbjct: 409 EAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALL 468

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK   +E +  +  +M  + + P V+T++++ +G  +   +  A+ +  EM   +V 
Sbjct: 469 DGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVM 528

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T  Y   IDG  K G    A +  + ++  + E     +  L++ L ++G+++ A  L
Sbjct: 529 PNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSL 588

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G+ P++V Y  +I G+  +G    A  +  +M+ K +  + V +N L+ G +R
Sbjct: 589 IIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLR 648



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 115/237 (48%), Gaps = 8/237 (3%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           + TLI  +        A   F  M   G +  +  +NTL+  +  +  V +   +YS+ML
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA-AETSTYNTFIDGLCKNGYI 141
             G+ P V + N L H L ++  ++ AL     ++++DV   +  TYNT I G C+ G +
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGY---LRNNDVVDIDNVTYNTVIWGFCQKGLV 178

Query: 142 VEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            +   L   +  +K  L  ++ +C  L+ G C+IG ++ A  +  +L   G+  +V+  N
Sbjct: 179 DQGFGLLSEM--VKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +I G+C  G M +A +L  +     V  + VT+NTL+    +  + ++   L + +
Sbjct: 237 TLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEI 293


>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 132/255 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA R+ + +  RG  P+  +Y+T+I GFC  G +  AR+L+  M   G + N  TYN +
Sbjct: 288 DEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVM 347

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I GYCK +D  E+  LY +M  +G    VV+Y+T+  GL+   + + AL LF EM    +
Sbjct: 348 IYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGI 407

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A +  +YN+ I GLC+ G + +A  L   L +   E  + +++ LI  LCK+G  E A  
Sbjct: 408 ARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMR 467

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +    L P   T++ MI G    G   +  +  L M +  + PN  TF  L+    
Sbjct: 468 LLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLK 527

Query: 242 RNNETSKVVELLHRM 256
           R N    ++ +L  M
Sbjct: 528 RENRLDDILIVLDLM 542



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 130/254 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  ++++G+  +  V++ LI+GFC   + DR  E+   M    C  ++ TY  +ING  
Sbjct: 223 LLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLL 282

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K +  +E+  +++++  +G  P  V Y T+  G  ++  +  A KL+ EM    +     
Sbjct: 283 KRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEY 342

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I G CK     EA +L+  +        + +YS +I GL   GK + A  LF  +
Sbjct: 343 TYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEM 402

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R G+  ++++YN +I G C +G++ KA +L   +  +G+ P+  +F  L+    +  +T
Sbjct: 403 SRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDT 462

Query: 247 SKVVELLHRMDERN 260
              + LL  M +R+
Sbjct: 463 EGAMRLLKDMHDRH 476



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 123/255 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D  S +L +MI     P+ + Y  +I+G     + D A  +F  +   G   + V Y T+
Sbjct: 253 DRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTV 312

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+C    + E+  L+ EM+ KG+ P   TYN + +G  ++     A KL+D+M     
Sbjct: 313 IKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGY 372

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    +Y+T I GL  +G   EA  LF  +        + +Y+ LI GLC+ G+L  A  
Sbjct: 373 AENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATN 432

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   L   GL P+V ++  +I   C  G  + A  L  DM  + + P   T + +++G  
Sbjct: 433 LLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLS 492

Query: 242 RNNETSKVVELLHRM 256
           +  + ++ +E L +M
Sbjct: 493 KKGDFAQGMEWLLKM 507



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 4/258 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYST--LIDGFCLTGEIDRARELFVSMDING-CMHNVVTY 58
           D   +L +LMI+ GV  N  V +   LI  FC   ++    EL   +   G C+ N V +
Sbjct: 181 DLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTV-F 239

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LING+CK K  +    +   M++    P++ TY  + +GL +  + + A ++F++++ 
Sbjct: 240 NALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKD 299

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                +   Y T I G C  G + EA +L+  +           Y+ +I G CK+     
Sbjct: 300 RGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAE 359

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +L+  +   G   NVV+Y+ MI G    G+ D+A  LF +M  KG+A + +++N+L+ 
Sbjct: 360 ARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIK 419

Query: 239 GCIRNNETSKVVELLHRM 256
           G  +  E +K   LL+++
Sbjct: 420 GLCQEGELAKATNLLNKL 437



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 2/225 (0%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI--RPTVV 91
           G ++   ++FVS+   G + +  ++N  +    K    +    LY  M+  G+     V 
Sbjct: 143 GMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVE 202

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           T   L       ++V +  +L  ++    +  + + +N  I+G CK       +E+   +
Sbjct: 203 TVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIM 262

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
             +KC   I  Y  +I+GL K  K + A+ +F  L   G  P+ V Y  +I GFC+ G +
Sbjct: 263 IAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLL 322

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +A  L+ +M  KG+ PN  T+N ++ G  +  + ++  +L   M
Sbjct: 323 AEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDM 367



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 84/174 (48%), Gaps = 5/174 (2%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G +P   + N LF  L +   V+ A  L   +++ D   +  +   ++  L +NG + E 
Sbjct: 92  GFKPDQSSCNALFDALVDAGAVKAAKSL---LEYPDFVPKNDSLEGYVRLLGENGMVEEV 148

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL--PRVGLMPNVVTYNIMI 202
            ++F +L+ +       +++  +    K+G+ +  W+L++ +    VG+  +V T   +I
Sbjct: 149 FDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLI 208

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             FC + ++   ++L   +  KG+  +   FN L+ G  +  +  +V E+LH M
Sbjct: 209 KAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIM 262



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/249 (18%), Positives = 91/249 (36%), Gaps = 44/249 (17%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK----TKD 70
           G +P+    + L D     G +  A+ L    D        V  N  + GY +       
Sbjct: 92  GFKPDQSSCNALFDALVDAGAVKAAKSLLEYPDF-------VPKNDSLEGYVRLLGENGM 144

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           VEE  +++  +   G  P+  ++N       ++ + +   KL++ M  S V         
Sbjct: 145 VEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVN------ 198

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
                                      + +E   CLI   C   K+   +EL + +   G
Sbjct: 199 ---------------------------IDVETVGCLIKAFCAENKVFNGYELLRQVLEKG 231

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L  +   +N +I+GFC   Q D+  ++   M A    P+  T+  ++ G ++  +  +  
Sbjct: 232 LCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAF 291

Query: 251 ELLHRMDER 259
            + + + +R
Sbjct: 292 RVFNDLKDR 300



 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 35/174 (20%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   M ++G+  +   Y++LI G C  GE+ +A  L   + I G   +V ++  L
Sbjct: 393 DEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPL 452

Query: 62  INGYCKTKDVEESLNLYSEM-----------------------------------LSKGI 86
           I   CK  D E ++ L  +M                                   LS  +
Sbjct: 453 IKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKL 512

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           +P + T+  L   L   ++++  L + D M       E S   + +    K  +
Sbjct: 513 KPNMQTFEHLIDCLKRENRLDDILIVLDLMFREGYRLEKSRICSLVTKFSKKNF 566


>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 376

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G+++++  +    ++ G + +   Y+ 
Sbjct: 75  VDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIAEMKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   +++++++ + M+  G +P    YN L +GL    + E A+++F EM  + 
Sbjct: 135 MINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCK     EA +L + +        +  YS LI GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKVEMAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P++  +NI+IHG C+ G+M  A  L+ DM     APN VT NTLM G 
Sbjct: 255 QLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDVRNALVIWARI 330



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 124/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L+ MI+ G +PNA VY+ LI+G   + + + A  +F  M    C   ++TYNT
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ +L  EML KG  P V+TY+ L  GL   H+VE AL+L+ ++    
Sbjct: 205 LINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +    C   +  ++ L++G  K G +  A 
Sbjct: 265 FKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K + P  +T
Sbjct: 325 VIWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIVPTIIT 376



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 130/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++  +L++   +G   +AF YS +I+G C   ++D+A  +   M  +GC  N   YN 
Sbjct: 110 VNKSLHVLEIAEMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNA 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING   +   E+++ ++ EM S    PT++TYNTL +GL +  +   A  L  EM    
Sbjct: 170 LINGLVGSSKFEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  I GLC    +  A +L+  +     +  I+ ++ LI GLC +GK++ A 
Sbjct: 230 WNPCVITYSMLIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +      PN+VT+N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISGAILFLH 363



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 117/229 (51%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YNT++NG+ +   +++   L+  M  +G R  V
Sbjct: 1   CESGDIDGAEMVYKDIVESKLSLDAVVYNTMLNGFFRVGRIKDCFELWELMGKEGSR-NV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF   +V+  + +++ M+ S    ++ TY   + G CKNG + ++  +   
Sbjct: 60  ASFNIMMRGLFNNGKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEI 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
             +    L   AYS +I+GLCK  KL+ A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AEMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + A  +F +M +   +P  +T+NTL+ G  +     +  +L+  M E+
Sbjct: 180 FEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEK 228


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 139/309 (44%), Gaps = 51/309 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A   LD M++ G  P    Y+TLI  +    ++  A ELF  M   GC  NV+TY  
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI----------------RPTVVTYNTLFHGLFEIH 104
           LI+GYCK+ ++E++  +Y+ M                     +P VVTY  L  GL + H
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR--------------- 149
           +V+ A  L + M        T  Y+  IDG CK   + EA E+F                
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYS 719

Query: 150 --------------TLRVL------KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
                          L+VL       C   I  Y+ +IDGL K+ K + A++L   +   
Sbjct: 720 SLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEK 779

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  PNVVTY  MI GF   G++DK  +LF +M +KG APN VT+  L+  C       + 
Sbjct: 780 GCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEA 839

Query: 250 VELLHRMDE 258
             LL  M +
Sbjct: 840 YALLEEMKQ 848



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 133/275 (48%), Gaps = 16/275 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M   GV P+ + Y+ LID F   G I +A      M  +GC   VVTY T
Sbjct: 505 VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTT 564

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ--- 117
           LI+ Y K K V  +  L+  M++KG  P V+TY  L  G  +   +E A +++  M+   
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDA 624

Query: 118 -----------HSDVAAETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
                       ++VA + +  TY   +DGLCK   + +A +L  T+ V  CE     Y 
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYD 684

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK  KL+ A E+F  +   G  PNV TY+ +I     D ++D    +   M   
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 744

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             APN V +  ++ G  +  +T +  +L+  M+E+
Sbjct: 745 SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEK 779



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            ++A +++  M+  G  P+   YS +I   C    ++ A  LF  M   G + +V TY  
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + K   ++++ N   EM+  G  PTVVTY TL H   +  +V  A +LF+ M    
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV----------------LKCELGIEAYS 164
                 TY   IDG CK+G I +A +++  +R                 +  +  +  Y 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            L+DGLCK  K++ A +L +++   G  PN + Y+ +I GFC   ++D+A ++F  M  +
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVER 709

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G  PN  T+++L+    ++     V+++L +M E +
Sbjct: 710 GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 123/254 (48%), Gaps = 4/254 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   ++L  M++    PN  +Y+ +IDG     + D A +L + M+  GC  NVVTY  
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTA 790

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+ K   V++ L L+ EM SKG  P  VTY  L +       ++ A  L +EM+ + 
Sbjct: 791 MIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTY 850

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                S+Y   I+G  K  +I+    L   +        I  Y  LID   K G+LE A 
Sbjct: 851 WPKHVSSYCKVIEGY-KREFILSLG-LLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVAL 908

Query: 181 ELFQSL--PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           EL + +    + +      Y  +I+ F    ++D A +LF DM   GV P+  TF  L++
Sbjct: 909 ELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLM 968

Query: 239 GCIRNNETSKVVEL 252
           G IR     + ++L
Sbjct: 969 GLIRVRRWEEALQL 982



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 2/252 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL+ M   G  PN  VY  LIDGFC   ++D A+E+F  M   G   NV TY++
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSS 720

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K K ++  L + S+ML     P +V Y  +  GL ++ + + A KL   M+   
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   IDG  K G + +  ELFR +    C      Y+ LI+  C  G L+ A+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + + +     +V +Y  +I G+  +  +  +  L  ++E  G AP  + +  L+   
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPTILLYKVLIDNF 898

Query: 241 IRNNETSKVVEL 252
           ++       +EL
Sbjct: 899 VKAGRLEVALEL 910



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 115/272 (42%), Gaps = 16/272 (5%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +  + M+  G   N     +     C  G+ ++A ++   M  NG + +  TY+ +I 
Sbjct: 438 AEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    VE +  L+ EM   G+ P V TY  L     +   ++ A    DEM       
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY T I    K   +  A ELF  +    C   +  Y+ LIDG CK G +E A +++
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIY 617

Query: 184 ------QSLPRVGLM----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
                   +P V +           PNVVTY  ++ G C   ++  A DL   M   G  
Sbjct: 618 ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCE 677

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           PN + ++ L+ G  +  +  +  E+ H+M ER
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVER 709



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 116/290 (40%), Gaps = 41/290 (14%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L L+ +    PN  +Y+ +I G C     + A +    M    C+ NV TY  L+ G   
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K +     + S M+++G  P+   +N+L H   +     +A KL  +M+  +       
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415

Query: 128 YNTFIDGLCKNGYI----------------VEAAELFRTLRVLK-----CELG------- 159
           YN  I  +C  G +                + A  +   + V+      C  G       
Sbjct: 416 YNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYK 475

Query: 160 -------------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           YS +I  LC   ++E A+ LF+ +   G++P+V TY I+I  F 
Sbjct: 476 VIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFS 535

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G + +AH+   +M   G  P  VT+ TL+   ++  + S   EL   M
Sbjct: 536 KAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELM 585



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 108/282 (38%), Gaps = 45/282 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M + G+  + F         C  G+   A  L    D    + N + YN 
Sbjct: 257 LDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDF---VPNTILYNK 313

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C+    EE+++  + M S    P V TY  L  G     Q+    ++   M    
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG----------- 169
                + +N+ +   CK+     A +L + +   +C+ G   Y+ LI             
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433

Query: 170 ------------------------------LCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
                                         LC  GK E A+++   +   G +P+  TY+
Sbjct: 434 TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYS 493

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            +I   CN  +++ A  LF +M+  GV P+  T+ T+++ C 
Sbjct: 494 EVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY-TILIDCF 534



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 7/248 (2%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV--TYNTLINGYCKTKD 70
           Q G      VY  L+D F   G  DR  E F+  +I G    V+    N LI   C+   
Sbjct: 164 QIGYDHTPAVYIALLDVF-ERGSYDRVPEEFLR-EIRGDDKEVLGKLLNVLIRKCCRNGL 221

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
              +L     +   G +PT +TYN L        +++ A  +  EM    ++ +  T   
Sbjct: 222 WNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGF 281

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F   LCK G   EA  L      +   +    Y+ +I GLC+    E A +    +    
Sbjct: 282 FAQALCKVGKWREALSLIEKEDFVPNTI---LYNKMISGLCEASFFEEAMDFLNRMRSTS 338

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +PNV TY I++ G  N  Q+ +   +   M A+G  P+   FN+L+    ++++ S   
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 251 ELLHRMDE 258
           +LL +M++
Sbjct: 399 KLLKKMEK 406



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 39/195 (20%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           +D+   L   M  +G  PN   Y+ LI+  C TG +D A                     
Sbjct: 801 VDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCK 860

Query: 40  ------RELFVSMDI------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                 RE  +S+ +      NG    ++ Y  LI+ + K   +E +L L+ E++S  + 
Sbjct: 861 VIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMS 920

Query: 88  PTVVT--YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            T     Y +L +      +++HA +LF +M    V  +  T+   + GL +     EA 
Sbjct: 921 MTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEAL 980

Query: 146 ELFRTLRVLKCELGI 160
           +L  +L    C++ I
Sbjct: 981 QLSDSL----CQMDI 991


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   LD M++RG++P+ + YS LI G     +++ A + +     NG + +V TY+ 
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK +  EE    + EM+SK ++P  V YN L        ++  AL+L ++M+H  
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  ++TY + I G+     + EA  LF  +R+   E  +  Y+ LIDG  K+G++    
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +    + PN +TY +MI G+  DG + +A  L  +M  KG+ P+ +T+   + G 
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++      V+E     DE N
Sbjct: 796 LKQG---GVLEAFKGSDEEN 812



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 133/259 (51%), Gaps = 3/259 (1%)

Query: 5   SRLLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           S+ L+L  Q   +G   +    + L+ G C  G++D A  +   +   GC+ + V+YNTL
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C  K ++E+     EM+ +G++P   TY+ L  GLF +++VE A++ +D+ + + +
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+  IDG CK     E  E F  +     +     Y+ LI   C+ G+L  A E
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G+ PN  TY  +I G     ++++A  LF +M  +G+ PN   +  L+ G  
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726

Query: 242 RNNETSKVVELLHRMDERN 260
           +  +  KV  LL  M  +N
Sbjct: 727 KLGQMVKVECLLREMHSKN 745



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 124/259 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+   ++ RG   +   Y+TLI G C   ++D A      M   G   +  TY+ 
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G      VEE++  + +    G+ P V TY+ +  G  +  + E   + FDEM   +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   T  YN  I   C++G +  A EL   ++          Y+ LI G+  I ++E A 
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   GL PNV  Y  +I G+   GQM K   L  +M +K V PN +T+  ++ G 
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760

Query: 241 IRNNETSKVVELLHRMDER 259
            R+   ++   LL+ M E+
Sbjct: 761 ARDGNVTEASRLLNEMREK 779



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L   M + GV PN   ++T+IDG  + G  D A      M   G    ++TY+ 
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G  + K + ++  +  EM  KG  P V+ YN L     E   +  A+++ D M    
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKC--------- 156
           ++  +STYNT I G CKNG    A  L               F ++  L C         
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455

Query: 157 -----------ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                        G    + LI GLCK GK   A EL+      G + +  T N ++HG 
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G++D+A  +  ++  +G   + V++NTL+ GC    +  +    L  M +R
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-----DIN-GCMHN 54
           +++A  + DLM+ +G+   +  Y+TLI G+C  G+ D A  L   M     ++N G   +
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440

Query: 55  VVT-----------------------------YNTLINGYCKTKDVEESLNLYSEMLSKG 85
           V+                                TLI+G CK     ++L L+ + L+KG
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                 T N L HGL E  +++ A ++  E+       +  +YNT I G C    + EA 
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                +     +     YS LI GL  + K+E A + +    R G++P+V TY++MI G 
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C   + ++  + F +M +K V PN V +N L+    R+   S  +EL   M  +
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 4/234 (1%)

Query: 26  LIDGFCLTGEIDR---ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           LI+ +C   + D    A ++F  +   G   +  T N L+    +  + ++    + +++
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVV 252

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG+ P V  + T  +   +  +VE A+KLF +M+ + VA    T+NT IDGL   G   
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA      +     E  +  YS L+ GL +  ++  A+ + + + + G  PNV+ YN +I
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             F   G ++KA ++   M +KG++    T+NTL+ G  +N +      LL  M
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 60/121 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L + M   G+ PN F Y+ LIDG+   G++ +   L   M       N +TY  
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GY +  +V E+  L +EM  KGI P  +TY    +G  +   V  A K  DE  ++ 
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 815

Query: 121 V 121
           +
Sbjct: 816 I 816



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 39/202 (19%)

Query: 61  LINGYC---KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           LI  YC   K      +L+++  + +KG+ P+  T N L   L   ++ +   + FD   
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD--- 250

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                           G+  + Y+   A                     I+  CK GK+E
Sbjct: 251 ------------VVCKGVSPDVYLFTTA---------------------INAFCKGGKVE 277

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF  +   G+ PNVVT+N +I G    G+ D+A      M  +G+ P  +T++ L+
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337

Query: 238 LGCIRNNETSKVVELLHRMDER 259
            G  R         +L  M ++
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKK 359


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 131/238 (55%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D A  L   M + G  P+ F Y  ++D    +  I+   ++   M   G     VTYNT
Sbjct: 782  IDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNT 841

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +I+G  K+K ++E++NLY +++S+G  PT  TY  L  GL +   +E A  LFDEM    
Sbjct: 842  IISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECG 901

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 + YN  ++G    G   +  ELF ++        I++Y+ +ID LC  G+L    
Sbjct: 902  CEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGL 961

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              F+ L  +GL P+++TYN++IHG    G++++A  L+ DME KG+APN  T+N+L+L
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + D M Q+G+ P  + Y++LI GF      +RA ELF  M+I+G   N  T+  
Sbjct: 362 VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVL 421

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            IN + K+ +  ++L  Y  M SKGI P VV  N + +GL +  ++  A ++F E++   
Sbjct: 422 FINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMG 481

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TY   I    K     EA ++F  +   +C   + A + LID L K G+   AW
Sbjct: 482 ISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAW 541

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  L  + L P   TYN ++ G   +G++ +   L   M +    PN +T+NT++   
Sbjct: 542 KIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCL 601

Query: 241 IRNNETSKVVELLHRM 256
            +N E +  +++L+ M
Sbjct: 602 CKNGEVNYALDMLYSM 617



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 128/254 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A   L +M + G+  NA+ Y+ LI     +G    A +++ +M  +G +  V TY+ L+ 
Sbjct: 155 APVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLML 214

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            + K +D E  + L  EM ++G+RP V +Y      L +  ++E A ++  +M+      
Sbjct: 215 AFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKP 274

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T    I  LC  G + +A ++F  ++    +     Y  L+D     G   +  E++
Sbjct: 275 DVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIW 334

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            +L   G   NVV+Y   +   C  G++D+A D+F +M+ KG+ P   ++N+L+ G ++ 
Sbjct: 335 NALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKA 394

Query: 244 NETSKVVELLHRMD 257
           +  ++ +EL + M+
Sbjct: 395 DRFNRALELFNHMN 408



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 107/236 (45%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +DEA  L   ++  G  P    Y  L+DG    G I+ A  LF  M   GC  N   YN 
Sbjct: 852  LDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNI 911

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L+NGY    D E+   L+  M+ +G+ P + +Y  +   L    ++   L  F ++    
Sbjct: 912  LLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 971

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  +  TYN  I GL K+G + EA  L+  +        +  Y+ LI  L K GK   A 
Sbjct: 972  LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAG 1031

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            ++++ L   G  PNV TYN +I G+   G  + A   +  M   G  PN  T+  L
Sbjct: 1032 KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 132/256 (51%), Gaps = 4/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +  +LM  +G+ P+    + ++ G   TG +  A+ +F  +   G   + +TY  +I
Sbjct: 434 KALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMI 493

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               K  + +E++ +++EM+     P V+  N+L   L++  +   A K+F E++  ++ 
Sbjct: 494 KCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLE 553

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT + GL + G + E  +L   +        I  Y+ ++D LCK G++  A ++
Sbjct: 554 PTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDM 613

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             S+   G MP++ +YN +++G   + ++D+A  +F  M+ K +AP+  T  T++   +R
Sbjct: 614 LYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVR 672

Query: 243 NNETSKVVELLHRMDE 258
              +  + E LH + E
Sbjct: 673 ---SGLMKEALHTVRE 685



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 126/264 (47%), Gaps = 9/264 (3%)

Query: 3   EASRLLDL------MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV 56
           +A RL D       M     +P+   Y TL+D    +G+     E++ ++  +G   NVV
Sbjct: 288 DAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVV 347

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           +Y   ++  C+   V+E+L+++ EM  KGI P   +YN+L  G  +  +   AL+LF+ M
Sbjct: 348 SYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM 407

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                     T+  FI+   K+G  ++A + +  ++       + A + ++ GL K G+L
Sbjct: 408 NIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRL 467

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  +F  L  +G+ P+ +TY +MI         D+A  +F +M     AP+ +  N+L
Sbjct: 468 GMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSL 527

Query: 237 ---MLGCIRNNETSKVVELLHRMD 257
              +    R NE  K+   L  M+
Sbjct: 528 IDMLYKAGRGNEAWKIFYELKEMN 551



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 127/258 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+L  M + G +P+    + LI   C  G +  A+++F  M  +    + VTY T
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++    + D      +++ + + G    VV+Y      L ++ +V+ AL +FDEM+   
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +YN+ I G  K      A ELF  + +         +   I+   K G+   A 
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + ++ +   G++P+VV  N +++G    G++  A  +F +++A G++P+ +T+  ++  C
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 241 IRNNETSKVVELLHRMDE 258
            + +   + +++   M E
Sbjct: 497 SKASNADEAMKIFAEMIE 514



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 125/257 (48%), Gaps = 4/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA ++   + +  + P    Y+TL+ G    G++    +L   M+ N    N++TYNT+
Sbjct: 538 NEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTV 597

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++  CK  +V  +L++   M   G  P + +YNT+ +GL +  +++ A  +F +M+   +
Sbjct: 598 LDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-L 656

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS--CLIDGLCKIGKLETA 179
           A + +T  T +    ++G + EA    R   +L+ +  ++  S   L++G+ K    E +
Sbjct: 657 APDYATVCTILPSFVRSGLMKEALHTVREY-ILQPDSKVDRSSVHSLMEGILKRDGTEKS 715

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E  +++   GL+ + +  + +I   C   +   AH+L    E  GV+    ++N L+ G
Sbjct: 716 IEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICG 775

Query: 240 CIRNNETSKVVELLHRM 256
            +  +      EL   M
Sbjct: 776 LVDEDLIDIAEELFSEM 792



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 116/287 (40%), Gaps = 42/287 (14%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRA----RELFVSMDINGCMHNVVTYNTLINGYCK 67
           +++ + P+     T++  F  +G +  A    RE  +  D      +V   ++L+ G  K
Sbjct: 652 MKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSV---HSLMEGILK 708

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
               E+S+     + S G+    +  + +   L +  +   A +L  + ++  V+ +T +
Sbjct: 709 RDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGS 768

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCE----------------------LGIE---- 161
           YN  I GL     I  A ELF  ++ L C+                      L I+    
Sbjct: 769 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 828

Query: 162 ---------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                     Y+ +I GL K   L+ A  L+  L   G  P   TY  ++ G   DG ++
Sbjct: 829 NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 888

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            A  LF +M   G  PNC  +N L+ G     +T KV EL   M E+
Sbjct: 889 DAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQ 935



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 7/193 (3%)

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI----HQVEHALKLFDEMQHSDVAAET 125
           D EE+L L+   LS   +P VV      + + E+     +V    ++FD MQ   + A  
Sbjct: 80  DPEEALELF---LSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANV 136

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            T+ T    +   G +  A      ++     L    Y+ LI  L K G    A +++++
Sbjct: 137 GTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKA 196

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G++P V TY++++  F      +    L  +MEA+GV PN  ++   +    +   
Sbjct: 197 MAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGR 256

Query: 246 TSKVVELLHRMDE 258
             +   +L +M+E
Sbjct: 257 LEEAYRILRKMEE 269



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 7/157 (4%)

Query: 107 EHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAY 163
           E AL+LF  + +   V   T + N  ++ +  +G + + A++F  ++  ++K  +G    
Sbjct: 82  EEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGT--- 138

Query: 164 SCLIDGLCKI-GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
            C + G   + G L +A      +   G++ N  TYN +I+     G   +A D++  M 
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA 198

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A GV P   T++ LML   +  +   VV LL  M+ R
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR 235



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 3    EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            EA ++ + ++ +G +PN F Y+ LI G+ ++G  + A   +  M + GC  N  TY  L 
Sbjct: 1029 EAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLP 1088

Query: 63   N 63
            N
Sbjct: 1089 N 1089


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    ++M++ G+ P+    + +ID  C  G ++ A  L   M   G   N+ TYN +IN
Sbjct: 484 ALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVIN 543

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK +  E +L L+  ML + + P+VV Y+TL  G  +    + AL L+  M    V  
Sbjct: 544 RLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTP 603

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   Y   I+ LC    + EA  LF+ +          +Y+ +I G C+IG +  AW LF
Sbjct: 604 DMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALF 663

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + G +P VVTY  ++ G+C   ++D A  L  +M+ KG+ P+ VT+N L+    R 
Sbjct: 664 NEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRR 723

Query: 244 NETSKVVELLHRMDE 258
               K +E+L+ M E
Sbjct: 724 GNLDKALEMLNEMKE 738



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+ +L+ M + G  P    YST I G C  G ++ A +   S+     + NV  YN +I
Sbjct: 273 QATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAII 332

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK  +++E+L +  EM S GI P V TY+ L HG  +   VE  L L +EM++S++ 
Sbjct: 333 HGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNME 392

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA--- 179
               +Y++   GLCK      + ++FR L     +    AYS LI G C  G L++A   
Sbjct: 393 PSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKL 452

Query: 180 ----------------------------W----ELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                                       W    E F  +   G++P++ T N++I   C 
Sbjct: 453 MEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCR 512

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +G++++A +L  +M+ +G+ PN  T+N ++    +  ++ + +EL   M +RN
Sbjct: 513 EGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++L+ M   G+ P+ + YS LI GFC  G++++   L   M  +    ++V+Y++
Sbjct: 341 LDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSS 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G CK +  + SL+++ ++ + G +     Y+ L  G      ++ A KL +EM  ++
Sbjct: 401 LFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNN 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A + S + + + G CK G  V A E F  +        I   + +ID  C+ G++E A 
Sbjct: 461 LAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEAL 520

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+ PN+ TYN +I+  C + + ++A +LF  M  + V P+ V ++TL+ G 
Sbjct: 521 NLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGF 580

Query: 241 IRNNETSKVVELLHRM 256
            + + + K + L  RM
Sbjct: 581 AKQSNSQKALMLYARM 596



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 131/236 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L++ M  +G+ PN F Y+ +I+  C   + +RA ELF  M     + +VV Y+T
Sbjct: 516 VEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYST 575

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K  + +++L LY+ ML  G+ P +V Y  L + L    ++  A  LF +M  + 
Sbjct: 576 LIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG 635

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y + I G C+ G + +A  LF  +        +  Y+ L+DG CK+ +++ A 
Sbjct: 636 MTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIAD 695

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            L   + R G+ P+VVTYN++I      G +DKA ++  +M+  GV P+ +T+  L
Sbjct: 696 MLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 122/239 (51%), Gaps = 6/239 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLT--GEID----RARELFVSMDINGCMHNVVTYNT 60
           L + M   G  PN F Y+ +++ +C    GE D    +A E+   M+ NG    VVTY+T
Sbjct: 236 LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G C+   VE +L+    ++S      V  YN + HGL +  +++ ALK+ +EM+   
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  TY+  I G CK G + +   L   ++    E  + +YS L  GLCK    + + 
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++F+ L   G   +   Y+I+I GFC  G +D AH L  +M    +AP+   F +L+ G
Sbjct: 416 DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHG 474



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 6/227 (2%)

Query: 40  RELFVSMDINGCMHNVVTYNTLINGYCKTK------DVEESLNLYSEMLSKGIRPTVVTY 93
           R LF  M   G   NV TY  ++N YCK        D  ++  +  EM   G  PTVVTY
Sbjct: 234 RSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           +T  +GL  +  VE AL     +  ++       YN  I GLCK G + EA ++   ++ 
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
                 +  YS LI G CK G +E    L + +    + P++V+Y+ + HG C     D 
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + D+F D+ A G   +   ++ L+ G     +     +L+  M   N
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNN 460



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 6/227 (2%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +  V+  LI  F     ++ A ++F+     G   +  + N L+    +    E   +L+
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237

Query: 79  SEMLSKGIRPTVVTYNTLFH----GLFEIHQVE--HALKLFDEMQHSDVAAETSTYNTFI 132
            EM S G  P V TY  + +    G F    ++   A ++ +EM+ +  +    TY+T+I
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
            GLC+ GY+  A +  R+L      + +  Y+ +I GLCK G+L+ A ++ + +   G+ 
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           P+V TY+I+IHGFC  G ++K   L  +M+   + P+ V++++L  G
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHG 404



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 8/142 (5%)

Query: 109 ALKLFDEMQHS--DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           A +LF  +  S  D A     ++  I     N  +  A ++F   +    EL   + + L
Sbjct: 161 AFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFL 220

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC--NDGQMD----KAHDLFLD 220
           +  L +  + E    LF+ +   G  PNV TY IM++ +C  N G+ D    +A ++  +
Sbjct: 221 LKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEE 280

Query: 221 MEAKGVAPNCVTFNTLMLGCIR 242
           ME  G +P  VT++T + G  R
Sbjct: 281 MERNGESPTVVTYSTYIYGLCR 302


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 142/260 (54%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L    ++    P+ + ++ LI G C  GEID+A E F +M   GC  ++V+YNT
Sbjct: 195 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 254

Query: 61  LINGYCKTKDVEESLNLYSE-MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LING+C+  ++ +  +L  E ML KG+ P V+TY ++  G  ++  ++ A +LFDEM  S
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     T+N  IDG  K G +  A  ++  + +L C   +  ++ LIDG C+ G++   
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L++ +    L PNV TY ++I+  C + ++ +A +    +++  V P    +N ++ G
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 434

Query: 240 CIRNNETSKVVELLHRMDER 259
             +  +  +   ++  M E+
Sbjct: 435 FCKAGKVDEANFIVAEMQEK 454



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 137/261 (52%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYN 59
           +D+A      M   G  P+   Y+TLI+GFC   EI +  +L    M I G   +V+TY 
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++I+GYCK  D++ +  L+ EM+S GI+P   T+N L  G  ++  +  A+ ++++M   
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  T+ + IDG C+ G + +  +L+  ++V      +  Y+ LI+ LCK  ++  A
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
               + L    ++P    YN +I GFC  G++D+A+ +  +M+ K   P+ +TF  L++G
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469

Query: 240 CIRNNETSKVVELLHRMDERN 260
                   + +   ++M E N
Sbjct: 470 NCMKGRMVEAISTFYKMIEIN 490



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 3/244 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ +GV P+   Y+++I G+C  G++  A ELF  M  +G   N  T+N LI+G+ K  +
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGN 335

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  ++ +Y +ML  G  P VVT+ +L  G     +V   LKL++EM+  +++    TY  
Sbjct: 336 MRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAV 395

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+ LCK   I EA    R L+  +       Y+ +IDG CK GK++ A  +   +    
Sbjct: 396 LINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKK 455

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL---MLGCIRNNETS 247
             P+ +T+ I+I G C  G+M +A   F  M      P+ +T N+L   +L     NE S
Sbjct: 456 CRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEAS 515

Query: 248 KVVE 251
           ++ +
Sbjct: 516 QIKQ 519



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  + D M   G+ P++ +   L+  +   G++D A+     +   G   +   YN L
Sbjct: 126 DSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNL 185

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +N   K   V+E++ L+ E L     P V ++N L  GL  I +++ A + F  M +   
Sbjct: 186 LNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGC 245

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAW 180
             +  +YNT I+G C+   I +  +L +   ++K     +  Y+ +I G CK+G ++ A 
Sbjct: 246 FPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAAS 305

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +   G+ PN  T+N++I GF   G M  A  ++  M   G  P+ VTF +L+ G 
Sbjct: 306 ELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGY 365

Query: 241 IRNNETSKVVELLHRMDERN 260
            R  E ++ ++L   M  RN
Sbjct: 366 CREGEVNQGLKLWEEMKVRN 385



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 113/217 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  AS L D M+  G++PN F ++ LIDGF   G +  A  ++  M + GC+ +VVT+ +
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC+  +V + L L+ EM  + + P V TY  L + L + +++  A      ++ S+
Sbjct: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   YN  IDG CK G + EA  +   ++  KC      ++ LI G C  G++  A 
Sbjct: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             F  +  +  +P+ +T N +I      G  ++A  +
Sbjct: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 1/218 (0%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y  L+   C  G  D A+ +F  M  +G + +      L++ Y +   ++ + N  +E+ 
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH 171

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
             GI+ +   YN L + L + + V+ A+ LF E        +  ++N  I GLC+ G I 
Sbjct: 172 CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEID 231

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF-QSLPRVGLMPNVVTYNIM 201
           +A E F+ +    C   I +Y+ LI+G C++ ++    +L  + +   G+ P+V+TY  +
Sbjct: 232 KAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI 291

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           I G+C  G M  A +LF +M + G+ PN  TFN L+ G
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 1/205 (0%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           H   TY+ L+   CK    + +  ++  M S GI P       L      + +++ A   
Sbjct: 107 HTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNF 166

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
            +E+    +      YN  ++ L K   + EA  LFR          + +++ LI GLC+
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL-DMEAKGVAPNCV 231
           IG+++ A+E FQ++   G  P++V+YN +I+GFC   ++ K HDL   DM  KGV+P+ +
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI 286

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T+ +++ G  +  +     EL   M
Sbjct: 287 TYTSIISGYCKLGDMKAASELFDEM 311



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 84/185 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + + M+  G  P+   +++LIDG+C  GE+++  +L+  M +     NV TY  
Sbjct: 336 MRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAV 395

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   + E+ N    + S  + P    YN +  G  +  +V+ A  +  EMQ   
Sbjct: 396 LINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKK 455

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+   I G C  G +VEA   F  +  + C       + LI  L K G    A 
Sbjct: 456 CRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEAS 515

Query: 181 ELFQS 185
           ++ Q+
Sbjct: 516 QIKQA 520



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 82/169 (48%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
            I  T  TY+ L   L ++   + A  +FD M+   +  ++S     +    + G +  A
Sbjct: 104 SINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                 +     ++    Y+ L++ L K   ++ A  LF+       +P+V ++NI+I G
Sbjct: 164 KNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRG 223

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            C  G++DKA + F +M   G  P+ V++NTL+ G  R NE SK  +LL
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL 272



 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 41/84 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA+ ++  M ++  RP+   ++ LI G C+ G +  A   F  M    C+ + +T N+
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINS 500

Query: 61  LINGYCKTKDVEESLNLYSEMLSK 84
           LI+   K     E+  +    L K
Sbjct: 501 LISCLLKAGMPNEASQIKQAALQK 524


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA   LD M++RG++P+ + YS LI G     +++ A + +     NG + +V TY+ 
Sbjct: 545 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 604

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK +  EE    + EM+SK ++P  V YN L        ++  AL+L ++M+H  
Sbjct: 605 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 664

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  ++TY + I G+     + EA  LF  +R+   E  +  Y+ LIDG  K+G++    
Sbjct: 665 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 724

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +    + PN +TY +MI G+  DG + +A  L  +M  KG+ P+ +T+   + G 
Sbjct: 725 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 784

Query: 241 IRNNETSKVVELLHRMDERN 260
           ++      V+E     DE N
Sbjct: 785 LKQG---GVLEAFKGSDEEN 801



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 133/259 (51%), Gaps = 3/259 (1%)

Query: 5   SRLLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           S+ L+L  Q   +G   +    + L+ G C  G++D A  +   +   GC+ + V+YNTL
Sbjct: 476 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 535

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C  K ++E+     EM+ +G++P   TY+ L  GLF +++VE A++ +D+ + + +
Sbjct: 536 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 595

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+  IDG CK     E  E F  +     +     Y+ LI   C+ G+L  A E
Sbjct: 596 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 655

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G+ PN  TY  +I G     ++++A  LF +M  +G+ PN   +  L+ G  
Sbjct: 656 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 715

Query: 242 RNNETSKVVELLHRMDERN 260
           +  +  KV  LL  M  +N
Sbjct: 716 KLGQMVKVECLLREMHSKN 734



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 124/259 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R+   ++ RG   +   Y+TLI G C   ++D A      M   G   +  TY+ 
Sbjct: 510 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 569

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G      VEE++  + +    G+ P V TY+ +  G  +  + E   + FDEM   +
Sbjct: 570 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 629

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   T  YN  I   C++G +  A EL   ++          Y+ LI G+  I ++E A 
Sbjct: 630 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 689

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   GL PNV  Y  +I G+   GQM K   L  +M +K V PN +T+  ++ G 
Sbjct: 690 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 749

Query: 241 IRNNETSKVVELLHRMDER 259
            R+   ++   LL+ M E+
Sbjct: 750 ARDGNVTEASRLLNEMREK 768



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +L   M + GV PN   ++T+IDG  + G  D A      M   G    ++TY+ 
Sbjct: 265 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G  + K + ++  +  EM  KG  P V+ YN L     E   +  A+++ D M    
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 384

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKC--------- 156
           ++  +STYNT I G CKNG    A  L               F ++  L C         
Sbjct: 385 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 444

Query: 157 -----------ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                        G    + LI GLCK GK   A EL+      G + +  T N ++HG 
Sbjct: 445 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 504

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G++D+A  +  ++  +G   + V++NTL+ GC    +  +    L  M +R
Sbjct: 505 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 558



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-----DIN-GCMHN 54
           +++A  + DLM+ +G+   +  Y+TLI G+C  G+ D A  L   M     ++N G   +
Sbjct: 370 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 429

Query: 55  VVT-----------------------------YNTLINGYCKTKDVEESLNLYSEMLSKG 85
           V+                                TLI+G CK     ++L L+ + L+KG
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                 T N L HGL E  +++ A ++  E+       +  +YNT I G C    + EA 
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                +     +     YS LI GL  + K+E A + +    R G++P+V TY++MI G 
Sbjct: 550 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 609

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C   + ++  + F +M +K V PN V +N L+    R+   S  +EL   M  +
Sbjct: 610 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 663



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 4/234 (1%)

Query: 26  LIDGFCLTGEIDR---ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           LI+ +C   + D    A ++F  +   G   +  T N L+    +  + ++    + +++
Sbjct: 183 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVV 241

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            KG+ P V  + T  +   +  +VE A+KLF +M+ + VA    T+NT IDGL   G   
Sbjct: 242 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 301

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA      +     E  +  YS L+ GL +  ++  A+ + + + + G  PNV+ YN +I
Sbjct: 302 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 361

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             F   G ++KA ++   M +KG++    T+NTL+ G  +N +      LL  M
Sbjct: 362 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 415



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 60/121 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L + M   G+ PN F Y+ LIDG+   G++ +   L   M       N +TY  
Sbjct: 685 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 744

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GY +  +V E+  L +EM  KGI P  +TY    +G  +   V  A K  DE  ++ 
Sbjct: 745 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 804

Query: 121 V 121
           +
Sbjct: 805 I 805



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 39/202 (19%)

Query: 61  LINGYC---KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           LI  YC   K      +L+++  + +KG+ P+  T N L   L   ++ +   + FD   
Sbjct: 183 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD--- 239

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                           G+  + Y+   A                     I+  CK GK+E
Sbjct: 240 ------------VVCKGVSPDVYLFTTA---------------------INAFCKGGKVE 266

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +LF  +   G+ PNVVT+N +I G    G+ D+A      M  +G+ P  +T++ L+
Sbjct: 267 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 326

Query: 238 LGCIRNNETSKVVELLHRMDER 259
            G  R         +L  M ++
Sbjct: 327 KGLTRAKRIGDAYFVLKEMTKK 348


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 135/252 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M +RG+ PN  V +TLID  C  G++    EL   M   G   ++V YN 
Sbjct: 200 IQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNA 259

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C+ +D++ + ++  EM   G++P  VTY TL  G  +  +++ A+++  EM    
Sbjct: 260 LVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEG 319

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +  TY   I GL K G  V+A  +   +     +     Y+ +ID  CK G ++T +
Sbjct: 320 VALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGF 379

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +  + +   G  P +VTYN++++GFC+ GQM  A  L   M   GV PN +T+N L+ G 
Sbjct: 380 KHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGH 439

Query: 241 IRNNETSKVVEL 252
            ++ +     EL
Sbjct: 440 CKHGKVRDTEEL 451



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 119/239 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+ L  LM + G+ P+ + Y   I G C TG I  A E+F  M   G   N V   T
Sbjct: 165 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTT 224

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK  DV   L L  EM ++G++  +V YN L +G   +  ++ A  + +EM+   
Sbjct: 225 LIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDG 284

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E+ + +      L    Y+ LI GL K G+   A 
Sbjct: 285 LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAE 344

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +   +   GL P+  TY ++I  FC +G +        +M+ KG  P  VT+N +M G
Sbjct: 345 RILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNG 403



 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 127/248 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  GV P A  ++ L+     +G++  AR +F  M   G    VVT+NTL++G CK  D
Sbjct: 105 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 164

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +  L   M   GI P V TY     GL +  +++ A+++F+EM    +   T    T
Sbjct: 165 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTT 224

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK G +    EL   +     +  + AY+ L++G C++  ++ A ++ + + + G
Sbjct: 225 LIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDG 284

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ VTY  +I G C +G++D A ++  +M  +GVA + VT+  L+ G  +   +    
Sbjct: 285 LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAE 344

Query: 251 ELLHRMDE 258
            +L  M E
Sbjct: 345 RILCEMME 352



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 47/297 (15%)

Query: 2   DEASRLLDLMIQRGVRPN-AFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           D   RLL L++      + A + S +   +   G +     L +     G    +  ++ 
Sbjct: 28  DSPPRLLPLLVSAASTDDPAPLVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSD 87

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N   +   V E+   Y  +L  G+ P    +N L   +    ++  A  +FDEM    
Sbjct: 88  LMN---RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRG 144

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           V     T+NT + G+CK   +  A      LR L  + GI      Y   I GLCK G++
Sbjct: 145 VQPTVVTFNTLMSGMCKASDLNNA----NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRI 200

Query: 177 ETAWELFQSLPRVGLMPN-----------------------------------VVTYNIM 201
           + A E+F+ +   GL PN                                   +V YN +
Sbjct: 201 QDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNAL 260

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           ++GFC    M  A+D+  +M   G+ P+ VT+ TL+ GC +  E    +E+   M +
Sbjct: 261 VNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSD 317



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 38/207 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A+ +++ M + G++P+   Y+TLIDG C  GE+D A E+   M   G   + VTY  
Sbjct: 270 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 329

Query: 61  LING-----------------------------------YCKTKDVEESLNLYSEMLSKG 85
           LI+G                                   +CK  DV+       EM +KG
Sbjct: 330 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 389

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P +VTYN + +G   + Q+++A  L + M +  V     TYN  +DG CK+G + +  
Sbjct: 390 KNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE 449

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCK 172
           EL ++ + +  + G+  Y+ LI+   K
Sbjct: 450 EL-KSAKGMVSDFGV--YTSLINEFVK 473



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 3/178 (1%)

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           L +GIR  +  ++ L +    +  V  A   +  +  + V  E   +N  +  + ++G +
Sbjct: 74  LRRGIRVPMPAWSDLMN---RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKL 130

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
             A  +F  +     +  +  ++ L+ G+CK   L  A  L   + + G+ P+V TY   
Sbjct: 131 ASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAF 190

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           I G C  G++  A ++F +M  +G+ PN V   TL+    +  + +  +EL   M  R
Sbjct: 191 IQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATR 248


>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia salsoloides]
          Length = 410

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 127/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV P+ + YS LI+G C   +ID A ELF  M   G + N VT+ T
Sbjct: 179 LDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTT 238

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ +   ++TYNTL +GL +   ++ A  L DEM+   
Sbjct: 239 LIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKG 298

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L    Y+ LI GLC+ G+   A 
Sbjct: 299 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAE 358

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++I+ FC  G +     L  +M+  G  P+ VT
Sbjct: 359 KMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 131/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 147 ARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLIN 206

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++ +  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++A
Sbjct: 207 GLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSA 266

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A  L   +R+   +     Y+ LIDG CK G LETA+E  
Sbjct: 267 DLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHR 326

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P+  T+  ++
Sbjct: 327 KRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 380



 Score =  136 bits (343), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  GEI  AR +F ++   G   +VV++NTL+NGY +  D
Sbjct: 119 ILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGD 178

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G+ P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 179 LDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTT 238

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A  L   +   G
Sbjct: 239 LIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKG 298

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G ++ A +    M  + +  + V + TL+ G  +   +    
Sbjct: 299 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAE 358

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 359 KMLREM 364



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 111/203 (54%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  ++  + +++  +   G+RP+VV++NTL +G   +  ++   +L   M 
Sbjct: 131 FNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 190

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   I  A ELF  +           ++ LIDG CK G+++
Sbjct: 191 ASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 250

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L  +++TYN +I+G C  G + +A +L  +M  KG+ P+ +T+ TL+
Sbjct: 251 LAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLI 310

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 311 DGCCKEGDLETAFEHRKRMIQEN 333



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 116/241 (48%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           +R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +   
Sbjct: 54  LRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVW 113

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
             Y E+L  G   ++  +N L H   +  ++  A  +FD +    +     ++NT ++G 
Sbjct: 114 GFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGY 173

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            + G + E   L   +     E  +  YS LI+GLCK  K++ A ELF  +   GL+PN 
Sbjct: 174 IRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNG 233

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VT+  +I G C +G++D A +++  M ++ ++ + +T+NTL+ G  +  +  +   L+  
Sbjct: 234 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDE 293

Query: 256 M 256
           M
Sbjct: 294 M 294


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++ + M + G +PN+ +Y+ LI GFC       A  ++  M  NGC   V+TYNTLI
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK +  +E+ ++  EM+  G  P + TY +L  GLF   +++ AL ++ ++ +  + 
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWE 181
            +   +N  I GLC  G + EA  +F  ++  K C   +  Y+ L+DGL + G ++ A  
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAAT 636

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L+ S+   GL P++++YN  I G C+  ++ +   L  ++ ++G+ P  +T+N L+   I
Sbjct: 637 LWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVI 696

Query: 242 R 242
           +
Sbjct: 697 K 697



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 139/289 (48%), Gaps = 36/289 (12%)

Query: 6   RLLDLMIQ-RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           R+ D +++  G RPN   Y+ ++DG C  G      E++  M  N    +V+TY  LI+G
Sbjct: 249 RVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHG 308

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD---------- 114
            C++ DV+ +  +YSE++  G+      YN+L  G  +  +V+ A K +D          
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNL 368

Query: 115 -----------------------EMQHSDVA--AETSTYNTFIDGLCKNGYIVEAAELFR 149
                                  ++   DVA   +T T+ T I GLC+NG+  +A  +F 
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 150 TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
             RV   +L + +YS +I+GLC +G+L  A ++++ + + G  PN   YN +I GFC   
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +   A  ++  M   G +P  +T+NTL+ G  +  +  +   +   M E
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 133/246 (54%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G + + F YS++I+G C  G +  A +++  MD +GC  N   YN LI+G+C+     ++
Sbjct: 434 GKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDA 493

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + +YS+M   G  PTV+TYNTL  GL +  + + A  +  EM  +    + +TY + I G
Sbjct: 494 VRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP-RVGLMP 193
           L  +  I +A  +++ +     ++ +  ++ LI GLC  GK++ A  +F  +  +    P
Sbjct: 554 LFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP 613

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           N+VTYN ++ G    G +DKA  L+  +   G+ P+ +++NT + G    +   + ++LL
Sbjct: 614 NLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLL 673

Query: 254 HRMDER 259
             +  R
Sbjct: 674 DEVLSR 679



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 140/259 (54%), Gaps = 9/259 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L D + +R V P+   YSTL+ G      +D A +L   M  +    +VV YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 61  LINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L+ G  K  + E+ + ++ +++   G RP + TYN +  GL +  + +   ++++ M  +
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLE 177
           ++  +  TY   I GLC++G +  AA ++    ++K  L I+A  Y+ L+ G C+ G+++
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYS--EIIKTGLVIDAAMYNSLVKGFCQAGRVQ 351

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA--PNCVTFNT 235
            AW+ + S    GL  N+ TYNIMI G  + G +D+A +L+ D+  K VA  P+ VTF T
Sbjct: 352 EAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGT 409

Query: 236 LMLGCIRNNETSKVVELLH 254
           L+ G  +N   +K   +  
Sbjct: 410 LIHGLCQNGFANKAFTIFE 428



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 75/331 (22%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+R+   +I+ G+  +A +Y++L+ GFC  G +  A + + S    G + N+ TYN 
Sbjct: 315 VDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTYNI 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           +I G   +  V+E++ L+ ++L K +   P  VT+ TL HGL +      A  +F+E + 
Sbjct: 374 MIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV 432

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAA--------------------------ELFRTLR 152
           S    +  +Y++ I+GLC  G +V+A                           +++RT  
Sbjct: 433 SGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSD 492

Query: 153 VLK---------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY----- 198
            ++         C   +  Y+ LIDGLCK  K + A  + + +   G  P++ TY     
Sbjct: 493 AVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIR 552

Query: 199 ------------------------------NIMIHGFCNDGQMDKAHDLFLDM-EAKGVA 227
                                         NI+IHG C+ G++D+A  +F DM E K   
Sbjct: 553 GLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP 612

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           PN VT+NTLM G        K   L   + E
Sbjct: 613 PNLVTYNTLMDGLYETGYIDKAATLWTSITE 643



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 78/142 (54%), Gaps = 1/142 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYN 59
           +D+A  +   ++ +G++ +  +++ LI G C  G++D A  +F  M +   C  N+VTYN
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYN 619

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL++G  +T  ++++  L++ +   G+ P +++YNT   GL    ++   ++L DE+   
Sbjct: 620 TLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679

Query: 120 DVAAETSTYNTFIDGLCKNGYI 141
            +     T+N  +  + K G I
Sbjct: 680 GIIPTVITWNILVRAVIKYGPI 701



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 5/181 (2%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS----DVAAETSTYNTFIDGLCKNGY 140
           G  P + ++N L        +   A   F  + H      +A    TYN  +  LC  G 
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           +  A  LF +LR  +       YS L+ GL K  +L+ A +L   +PR  + P+VV YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 201 MIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++ G    G+ +K   ++  + +  G  PN  T+N ++ G  +     +V E+  RM   
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 260 N 260
           N
Sbjct: 294 N 294



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA  +  D+  ++   PN   Y+TL+DG   TG ID+A  L+ S+  +G   ++++YN
Sbjct: 595 VDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYN 654

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE 107
           T I G C    + E + L  E+LS+GI PTV+T+N L   + +   ++
Sbjct: 655 TRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 5/118 (4%)

Query: 144 AAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG----LMPNVVTY 198
           A + FR L  +L C  GI +++ L+D   +  +   A   F SL        + PN+ TY
Sbjct: 102 ALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           NI++   C  G +D+A  LF  +  + VAP+ +T++TLM G  + +     ++LL  M
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEM 219


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 134/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+DLM   G  PN   Y+ L+DG C  G++D A EL  ++  +GC  + V YNT++
Sbjct: 60  QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 119

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C  +   ++  L +EML +   P   T+N + + L     ++ A++L ++M      
Sbjct: 120 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 179

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN  I+GLC+   +  A  L   ++   C+  I  Y+ L+ GLC   +   A EL
Sbjct: 180 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEEL 239

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++ + G +P+ VT+N +I   C  G M  A ++F  M  KG  PN +T++T++ G  +
Sbjct: 240 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 299

Query: 243 NNETSKVVELLHRMDER 259
             +  + +EL + M  +
Sbjct: 300 ATKLDQALELFNEMGHK 316



 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 137/254 (53%), Gaps = 1/254 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+  M++    PN   ++ +I   C  G + +A +L   M  +GC  N+VTYN +I
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+ ++V+ ++ L S+M S G +P +VTYNTL  GL    +   A +L D M  +   
Sbjct: 190 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCL 249

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+NT I  LC+ G +V+A E+F+ +    C      YS +I GL K  KL+ A EL
Sbjct: 250 PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 309

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G  P+ + Y ++     +D  +++A      ++  G++P+ V +N ++LG  R
Sbjct: 310 FNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCR 368

Query: 243 NNETSKVVELLHRM 256
           N +T   ++++  M
Sbjct: 369 NGKTEFAIDIMAYM 382



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 129/257 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M+ RG  P+   Y+ L++  C      +A EL   M   GC  N VTYN L+
Sbjct: 25  DALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLM 84

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C   DV+++L L   + S G +P+ V YNT+  GL    +   A +L  EM   +  
Sbjct: 85  DGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP 144

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              +T+N  I  LC+ G + +A +L   +    C   I  Y+ +I+GLC+   ++ A  L
Sbjct: 145 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 204

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P++VTYN ++ G C+  +   A +L  +M   G  P+ VTFNTL+    +
Sbjct: 205 LSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 264

Query: 243 NNETSKVVELLHRMDER 259
                  +E+  +M ++
Sbjct: 265 KGLMVDAIEVFKQMPDK 281



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 118/243 (48%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+PNA+ Y+ LI   C  G++  A  +   M   GC  +VVTYN L+   CK +   +++
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L   M ++G  P  VTYN L  G+     V+ AL+L   +        T  YNT + GL
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C      +A EL   +    C      ++ +I  LC+ G L+ A +L + + + G   N+
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTYN +I+G C    +D A  L   M++ G  P+ VT+NTL+ G           EL+  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 256 MDE 258
           M +
Sbjct: 243 MTQ 245



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 120/229 (52%), Gaps = 1/229 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M   G +P+   Y+TL+ G C       A EL  +M  NGC+ + VT+NT
Sbjct: 198 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   C+   + +++ ++ +M  KG  P  +TY+T+  GL +  +++ AL+LF+EM H  
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y    + L  +  I EA +  R L+          Y+ ++ GLC+ GK E A 
Sbjct: 318 FNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 376

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           ++   +   G MP+ +TY I+I G   +G +++A +L + + ++ V  N
Sbjct: 377 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVN 425



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 64/140 (45%)

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  I  LC+ G + +A  +   +    C   +  Y+ L++  CK      A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G  PN VTYN+++ G C +G +D A +L  ++ + G  P+ V +NT++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 241 IRNNETSKVVELLHRMDERN 260
                     EL+  M   N
Sbjct: 123 CSAERWGDADELVTEMLREN 142


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A E+   M  NG + N VT+ T
Sbjct: 187 LDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTT 246

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+G  P ++TYNTL +GL     +  A  L +EM    
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKG 306

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +    EL + +      L    Y+ LI GLC+ G+   A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAE 366

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++ + +  VGL P+  TY ++++ FC  G +  A  L  +M+  G  P  VT
Sbjct: 367 KMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 135/260 (51%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  + D + +  +RP+   ++TL++G+   G++D    L  +M   G   +V TY+ 
Sbjct: 152 MRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSV 211

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK   ++E+  + +EML  G+ P  VT+ TL  G  +  +V+ A++++ +M    
Sbjct: 212 LINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQG 271

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYNT I GLC+ G + +A +L   + +   +     Y+ LIDG CK G LE  +
Sbjct: 272 FLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITF 331

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + + R  +  + VTY  +I G C +G+   A  +  +M   G+ P+  T+  +M   
Sbjct: 332 ELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEF 391

Query: 241 IRNNETSKVVELLHRMDERN 260
            +  +     +LL  M +RN
Sbjct: 392 CKTGDVKTASKLLREM-QRN 410



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 129/242 (53%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+ + ++ L+  FC  GE+  A+ +F ++       +VV++NTL+NGY +  D++E 
Sbjct: 131 GYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L S M + G++P V TY+ L +GL +  +++ A ++ +EM  + +     T+ T IDG
Sbjct: 191 FRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDG 250

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CKNG +  A E+++ +        +  Y+ LI GLC+ G L  A +L + +   GL P+
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPD 310

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY  +I G C +G ++   +L   M  + +  + VT+  L+ G  R        ++L 
Sbjct: 311 KITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLR 370

Query: 255 RM 256
            M
Sbjct: 371 EM 372



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 94/181 (51%)

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
             Y E+L  G  P++  +N L H   +  ++  A  +FD +    +     ++NT ++G 
Sbjct: 122 GFYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGY 181

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            + G + E   L   +     +  +  YS LI+GLCK  K++ A E+   +   GL+PN 
Sbjct: 182 IRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNG 241

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VT+  +I G C +G++D A +++  M ++G  P+ +T+NTL+ G  R  +  +  +L+  
Sbjct: 242 VTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEE 301

Query: 256 M 256
           M
Sbjct: 302 M 302



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 57/106 (53%)

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           ++G++ +A + FR  +  K  +  +    +++ L K+      W  ++ +   G  P++ 
Sbjct: 78  ESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECGYPPSLY 137

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +NI++H FC +G+M  A  +F  +    + P+ V+FNTLM G IR
Sbjct: 138 FFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIR 183


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 137/254 (53%), Gaps = 1/254 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+  M++    PN   ++ +I   C  G + +A +L   M  +GC  N+VTYN +I
Sbjct: 290 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 349

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+ ++V+ ++ L S+M S G +P +VTYNTL  GL    Q   A +L D M  +   
Sbjct: 350 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCL 409

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+NT I  LC+ G +V+A E+F+ +    C      YS +I GL K  KL+ A EL
Sbjct: 410 PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 469

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G  P+ + Y ++     +D  +++A      ++  G++P+ V +N ++LG  R
Sbjct: 470 FNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCR 528

Query: 243 NNETSKVVELLHRM 256
           N +T   ++++  M
Sbjct: 529 NGKTEFAIDIMAYM 542



 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 134/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+DLM   G  PN   Y+ L+DG C  G++D A EL  ++  +GC  + V YNT++
Sbjct: 220 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 279

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C  +   ++  L +EML +   P   T+N + + L     ++ A++L ++M      
Sbjct: 280 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 339

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN  I+GLC+   +  A  L   ++   C+  I  Y+ L+ GLC   +   A EL
Sbjct: 340 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEEL 399

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++ + G +P+ VT+N +I   C  G M  A ++F  M  KG  PN +T++T++ G  +
Sbjct: 400 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 459

Query: 243 NNETSKVVELLHRMDER 259
             +  + +EL + M  +
Sbjct: 460 ATKLDQALELFNEMGHK 476



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 129/257 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M+ RG  P+   Y+ L++  C      +A EL   M   GC  N VTYN L+
Sbjct: 185 DALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLM 244

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C   DV+++L L   + S G +P+ V YNT+  GL    +   A +L  EM   +  
Sbjct: 245 DGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP 304

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              +T+N  I  LC+ G + +A +L   +    C   I  Y+ +I+GLC+   ++ A  L
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P++VTYN ++ G C+  Q   A +L  +M   G  P+ VTFNTL+    +
Sbjct: 365 LSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424

Query: 243 NNETSKVVELLHRMDER 259
                  +E+  +M ++
Sbjct: 425 KGLMVDAIEVFKQMPDK 441



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 119/243 (48%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+PNA+ Y+ LI   C  G++  A  +   M   GC  +VVTYN L+   CK +   +++
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L   M ++G  P  VTYN L  G+     V+ AL+L   +        T  YNT + GL
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C      +A EL   +    C      ++ +I  LC+ G L+ A +L + + + G   N+
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           VTYN +I+G C    +D A  L   M++ G  P+ VT+NTL+ G     +     EL+  
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402

Query: 256 MDE 258
           M +
Sbjct: 403 MTQ 405



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 9/258 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL++   +    P+A + + L+   C  G  D A  +  +    G    VV Y  
Sbjct: 87  LDAALRLVESSPRP---PDAALANRLVRDLCRRGRPDDAERVVGAC---GPAATVVAYGA 140

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +GYC+   + ++  +   M    ++P   TYN L H L E  QV  AL + D+M    
Sbjct: 141 LTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRG 197

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +  TYN  ++  CK     +A EL   +R   C      Y+ L+DG+C  G ++ A 
Sbjct: 198 CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDAL 257

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL ++LP  G  P+ V YN ++ G C+  +   A +L  +M  +   PN  TFN ++   
Sbjct: 258 ELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 317

Query: 241 IRNNETSKVVELLHRMDE 258
            R     + ++LL +M +
Sbjct: 318 CRKGLLQQAIQLLEKMSK 335



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 120/226 (53%), Gaps = 1/226 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M   G +P+   Y+TL+ G C   +   A EL  +M  NGC+ + VT+NT
Sbjct: 358 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNT 417

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   C+   + +++ ++ +M  KG  P  +TY+T+  GL +  +++ AL+LF+EM H  
Sbjct: 418 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 477

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y    + L  +  I EA +  R L+          Y+ ++ GLC+ GK E A 
Sbjct: 478 FNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 536

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           ++   +   G MP+ +TY I+I G   +G +++A +L + + ++ V
Sbjct: 537 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 582



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 3/176 (1%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G   TVV Y  L  G     ++  A ++   M    V     TYN  I  LC+ G + +A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDA 186

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             +   +    C   +  Y+ L++  CK      A EL   +   G  PN VTYN+++ G
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            C +G +D A +L  ++ + G  P+ V +NT++ G           EL+  M   N
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN 302


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 130/256 (50%), Gaps = 8/256 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  +L  M  + + PN   YST+IDGF   G  D A  LF  M   G   + V+YNT
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ Y K    EE+L++  EM S GI+  VVTYN L  G  +  + +   K+F EM+   
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY+T IDG  K G   EA E+FR  +       +  YS LID LCK G + +A 
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G+ PNVVTYN +I  F     MD++     D    G  P    F++  L  
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS----ADYSNGGSLP----FSSSALSA 621

Query: 241 IRNNETSKVVELLHRM 256
           +   E ++V++L  ++
Sbjct: 622 LTETEGNRVIQLFGQL 637



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 1/236 (0%)

Query: 3   EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           EA+R L D M  R +  + F Y+TL+D  C  G++D A E+   M +   M NVV+Y+T+
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+ K    +E+LNL+ EM   GI    V+YNTL     ++ + E AL +  EM    +
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  + G  K G   E  ++F  ++       +  YS LIDG  K G  + A E
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +F+     GL  +VV Y+ +I   C +G +  A  L  +M  +G++PN VT+N+++
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 143/262 (54%), Gaps = 11/262 (4%)

Query: 2   DEASRLLDLMIQRGVRPN--AFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           D+A    +  ++R  R N    + S +I      G++  A+ +F +    G  + V  ++
Sbjct: 213 DKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFS 272

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF----HGLFEIHQVEHALKLFDE 115
            LI+ Y ++   EE++++++ M   G+RP +VTYN +      G  E  QV    K FDE
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA---KFFDE 329

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAE-LFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           MQ + V  +  T+N+ +  +C  G + EAA  LF  +   + E  + +Y+ L+D +CK G
Sbjct: 330 MQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +++ A+E+   +P   +MPNVV+Y+ +I GF   G+ D+A +LF +M   G+A + V++N
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448

Query: 235 TLMLGCIRNNETSKVVELLHRM 256
           TL+    +   + + +++L  M
Sbjct: 449 TLLSIYTKVGRSEEALDILREM 470



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 132/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           + ++  D M + GV+P+   +++L+      G  + AR LF  M       +V +YNTL+
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK   ++ +  + ++M  K I P VV+Y+T+  G  +  + + AL LF EM++  +A
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YNT +    K G   EA ++ R +  +  +  +  Y+ L+ G  K GK +   ++
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  + R  ++PN++TY+ +I G+   G   +A ++F + ++ G+  + V ++ L+    +
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561

Query: 243 NNETSKVVELLHRM 256
           N      V L+  M
Sbjct: 562 NGLVGSAVSLIDEM 575



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 3/133 (2%)

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           +  I  L + G +  A  +F T         + A+S LI    + G  E A  +F S+  
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMD--KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            GL PN+VTYN +I   C  G M+  +    F +M+  GV P+ +TFN+L+  C R    
Sbjct: 297 YGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355

Query: 247 SKVVELLHRMDER 259
                L   M  R
Sbjct: 356 EAARNLFDEMTNR 368



 Score = 41.6 bits (96), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           S +I  L + GK+  A  +F++    G    V  ++ +I  +   G  ++A  +F  M+ 
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 224 KGVAPNCVTFNTLMLGCIRNN-ETSKVVELLHRMDERN 260
            G+ PN VT+N ++  C +   E  +V +    M +RN
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRN 333


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 3/262 (1%)

Query: 1   MDEASRLLDLMIQRG--VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           MDEA   L+ MIQ    V P+   ++++I G C  G + +A ++   M   GCM N+VTY
Sbjct: 314 MDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTY 373

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI G+ +   V+ ++NL  E+   G+ P   TY+ L +G  ++ +V+ A K    M+ 
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             + AE   Y   +  +C+ G +  A  LF  +    C L   AYS +I G CK G ++T
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKT 492

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             +L Q +   GL P+ VTY+++I+ +   G +++A  +   M A G  P+   F++L+ 
Sbjct: 493 VKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIK 552

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G     +T KV++L+H M  +N
Sbjct: 553 GYSAEGQTDKVLKLIHEMRAKN 574



 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 133/258 (51%), Gaps = 2/258 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +  ++ + M +RG++P+  +++ LID  C  G+  +A ++   M   G   NVVTYN LI
Sbjct: 211 DVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLI 270

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  CK   V E+L L  EM  KG+ P VVTYNTL  GL  + +++ A+   +EM   D  
Sbjct: 271 NSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTV 330

Query: 123 AETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            E    T+N+ I GLCK G + +A ++   +    C   +  Y+ LI G  ++ K++ A 
Sbjct: 331 VEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAM 390

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   L   GL P+  TY+I+I+GF    ++D+A      M  +G+      +  L+   
Sbjct: 391 NLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAM 450

Query: 241 IRNNETSKVVELLHRMDE 258
            +     + + L + MD+
Sbjct: 451 CQQGMMERAMGLFNEMDK 468



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 129/243 (53%), Gaps = 5/243 (2%)

Query: 19  NAFVYSTLIDGFCLTG--EIDRARELFVSMDING---CMHNVVTYNTLINGYCKTKDVEE 73
           +A  Y+T++   C  G   + +AR L V M          N V+Y T++ G C ++   E
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           ++ L   M + G+R  VVTY TL  GL +  +++ AL+L DEM  S V      Y+  + 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G C++G   +  ++F  +     +  +  ++ LID LCK GK   A ++   + + GL P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NVVTYN++I+  C +G + +A  L  +M+ KGVAP+ VT+NTL+ G     E  + +  L
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 254 HRM 256
             M
Sbjct: 322 EEM 324



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 127/249 (51%), Gaps = 4/249 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
             RPNA  Y+T++ G C +     A  L  SM  +G   +VVTY TLI G C   +++ +
Sbjct: 118 AARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAA 177

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L  EM   G++P VV Y+ L  G     + +   K+F++M    +  +   +   ID 
Sbjct: 178 LELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDD 237

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G   +AA++   +     E  +  Y+ LI+ LCK G +  A  L + +   G+ P+
Sbjct: 238 LCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPD 297

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG---VAPNCVTFNTLMLGCIRNNETSKVVE 251
           VVTYN +I G     +MD+A   FL+   +G   V P+ VTFN+++ G  +    ++ V+
Sbjct: 298 VVTYNTLIAGLSGVLEMDEAMS-FLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVK 356

Query: 252 LLHRMDERN 260
           +   M ER 
Sbjct: 357 VREMMAERG 365



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 6/264 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M   GV+PN  VYS L+ G+C +G      ++F  M   G   +V+ +  
Sbjct: 174 LDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTG 233

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK     ++  +   M+ +G+ P VVTYN L + L +   V  AL L  EM    
Sbjct: 234 LIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKG 293

Query: 121 VAAETSTYNTFIDGLCKNGYIVEA----AELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           VA +  TYNT I GL     + EA     E+ +   V+  E  +  ++ +I GLCKIG++
Sbjct: 294 VAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVV--EPDVVTFNSVIHGLCKIGRM 351

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A ++ + +   G M N+VTYN +I GF    ++  A +L  ++   G+ P+  T++ L
Sbjct: 352 TQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSIL 411

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  +  E  +  + L  M +R 
Sbjct: 412 INGFSKMWEVDRAEKFLCTMRQRG 435



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 129/258 (50%), Gaps = 5/258 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  M   GVR +   Y TLI G C   E+D A EL   M  +G   NVV Y+ L+
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYC++   ++   ++ +M  +GI+P V+ +  L   L +  +   A K+ D M    + 
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I+ LCK G + EA  L + +        +  Y+ LI GL  + +++ A   
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320

Query: 183 FQSLPR--VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +    + P+VVT+N +IHG C  G+M +A  +   M  +G   N VT+N L+ G 
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 241 IRNNETSKVVELLHRMDE 258
           +R     KV   ++ MDE
Sbjct: 381 LR---VHKVKMAMNLMDE 395



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 14/209 (6%)

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTV---VTYNTLFHGLFE-----IHQVEHALK 111
            L+N   +   V E+ +L S +      P V   V+YNT+   L       + Q    L 
Sbjct: 56  ALLNRRLRGAPVTEACSLLSAL------PDVRDAVSYNTVLAALCRRGGDHLRQARSLLV 109

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
                 H        +Y T + GLC +    EA  L R+++       +  Y  LI GLC
Sbjct: 110 DMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLC 169

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
              +L+ A EL   +   G+ PNVV Y+ ++ G+C  G+      +F DM  +G+ P+ +
Sbjct: 170 DASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVI 229

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
            F  L+    +  +T K  ++   M +R 
Sbjct: 230 MFTGLIDDLCKEGKTGKAAKVKDMMVQRG 258



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +A  YST+I G C +G++   ++L   M   G   + VTY+ LIN Y K  D+EE+  + 
Sbjct: 473 DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVL 532

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            +M + G  P V  +++L  G     Q +  LKL  EM+  +VA +    +T I
Sbjct: 533 KQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 2/94 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M    +L+  M+  G+ P+A  YS LI+ +   G+++ A  +   M  +G + +V  +++
Sbjct: 490 MKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDS 549

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR--PTVVT 92
           LI GY      ++ L L  EM +K +   P +++
Sbjct: 550 LIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIIS 583


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 131/236 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M+  G+RP+ ++Y+ +I   C   ++ RA+E+   M+  GC  N+V YN LI+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK + V E++ +  ++  K ++P VVTY TL +GL ++ + E  L++ DEM     + 
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             +  ++ ++GL K G I EA  L + +        +  Y+ LID LCK  K   A  LF
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             + ++GL PN VTY+I+I  FC  G++D A     +M   G+  +   +N+L+ G
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 8/261 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L D M + G+RPN   YS LID FC  G++D A      M   G   +V  YN+LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK  D+  +    +EM++K + PTVVTY +L  G     ++  AL+L+ EM    +A
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+ T + GL + G I +A +LF  +     +     Y+ +I+G C+ G +  A+E 
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC----VTFNTLML 238
            + +   G++P+  +Y  +IHG C  GQ  +A  +F+D   KG   NC    + +  L+ 
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKG---NCELNEICYTGLLH 620

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  R  +  + + +   M +R
Sbjct: 621 GFCREGKLEEALSVCQEMVQR 641



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 132/258 (51%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L+  ++  GV PN FVY+ LID  C   +   A  LF  M   G   N VTY+ 
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C+   ++ +L+   EM+  G++ +V  YN+L +G  +   +  A     EM +  
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY + + G C  G I +A  L+  +        I  ++ L+ GL + G +  A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
           +LF  +    + PN VTYN+MI G+C +G M KA +   +M  KG+ P+  ++  L+ G 
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 240 CI--RNNETSKVVELLHR 255
           C+  + +E    V+ LH+
Sbjct: 588 CLTGQASEAKVFVDGLHK 605



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 142/296 (47%), Gaps = 39/296 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A   L  M ++G+ P+ + Y  LI G CLTG+   A+     +    C  N + Y  
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG-------------LFEIHQ-- 105
           L++G+C+   +EE+L++  EM+ +G+   +V Y  L  G             L E+H   
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677

Query: 106 --------------------VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                                + A  ++D M +        TY   I+GLCK G++ EA 
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGK--LETAWELFQSLPRVGLMPNVVTYNIMIH 203
            L   ++ +        Y C +D L K G+  ++ A EL  ++ + GL+ N  TYN++I 
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILK-GLLANTATYNMLIR 795

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           GFC  G++++A +L   M   GV+P+C+T+ T++    R N+  K +EL + M E+
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 35/272 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A   L  M+  G++ + + Y++LI+G C  G+I  A      M        VVTY +
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GYC    + ++L LY EM  KGI P++ T+ TL  GLF    +  A+KLF+EM   +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL------------RVL-------------- 154
           V     TYN  I+G C+ G + +A E  + +            R L              
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 155 ---------KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                     CEL    Y+ L+ G C+ GKLE A  + Q + + G+  ++V Y ++I G 
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                      L  +M  +G+ P+ V + +++
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 120/230 (52%), Gaps = 2/230 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M  RG++P+  +Y+++ID    TG+   A  ++  M   GC+ N VTY  +ING C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHSDVAAET 125
           K   V E+  L S+M      P  VTY      L +    ++ A++L + +    + A T
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG-LLANT 787

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
           +TYN  I G C+ G I EA+EL   +           Y+ +I+ LC+   ++ A EL+ S
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +   G+ P+ V YN +IHG C  G+M KA +L  +M  +G+ PN  T  T
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 117/253 (46%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           ++D M+     P+    S+L++G    G+I+ A  L   +   G   N+  YN LI+  C
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K +   E+  L+  M   G+RP  VTY+ L        +++ AL    EM  + +     
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YN+ I+G CK G I  A      +   K E  +  Y+ L+ G C  GK+  A  L+  +
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ P++ T+  ++ G    G +  A  LF +M    V PN VT+N ++ G     + 
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558

Query: 247 SKVVELLHRMDER 259
           SK  E L  M E+
Sbjct: 559 SKAFEFLKEMTEK 571



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 108/239 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A RL   M  +G+ P+ + ++TL+ G    G I  A +LF  M       N VTYN 
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYC+  D+ ++     EM  KGI P   +Y  L HGL    Q   A    D +   +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y   + G C+ G + EA  + + +     +L +  Y  LIDG  K    +  +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            L + +   GL P+ V Y  MI      G   +A  ++  M  +G  PN VT+  ++ G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 105/239 (43%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P     S L+ G         A ELF  M   G   +V  Y  +I   C+ KD+  +  +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            + M + G    +V YN L  GL +  +V  A+ +  ++   D+  +  TY T + GLCK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
                   E+   +  L+      A S L++GL K GK+E A  L + +   G+ PN+  
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           YN +I   C   +  +A  LF  M   G+ PN VT++ L+    R  +    +  L  M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 35/180 (19%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--------------- 47
           EA  + DLMI  G  PN   Y+ +I+G C  G ++ A  L   M                
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759

Query: 48  --------------------INGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                               + G + N  TYN LI G+C+   +EE+  L + M+  G+ 
Sbjct: 760 DILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P  +TY T+ + L   + V+ A++L++ M    +  +   YNT I G C  G + +A EL
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EAS L+  MI  GV P+   Y+T+I+  C   ++ +A EL+ SM   G   + V YNT
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
           LI+G C   ++ ++  L +EML +G+ P   T  T
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++ + M + G +PN+ +Y+ LI GFC       A  ++  M  NGC   V+TYNTLI
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK +  +E+ ++  EM+  G  P + TY +L  GLF   +++ AL ++ ++ +  + 
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWE 181
            +   +N  I GLC  G + EA  +F  ++  K C   +  Y+ L+DGL + G ++ A  
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAAT 636

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L+ S+   GL P++++YN  I G C+  ++ +   L  ++ ++G+ P  +T+N L+   I
Sbjct: 637 LWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVI 696

Query: 242 R 242
           +
Sbjct: 697 K 697



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 139/289 (48%), Gaps = 36/289 (12%)

Query: 6   RLLDLMIQ-RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           R+ D +++  G RPN   Y+ ++DG C  G      E++  M  N    +V+TY  LI+G
Sbjct: 249 RVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHG 308

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD---------- 114
            C++ DV+ +  +YSE++  G+      YN+L  G  +  +V+ A K +D          
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNL 368

Query: 115 -----------------------EMQHSDVA--AETSTYNTFIDGLCKNGYIVEAAELFR 149
                                  ++   DVA   +T T+ T I GLC+NG+  +A  +F 
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 150 TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
             RV   +L + +YS +I+GLC +G+L  A ++++ + + G  PN   YN +I GFC   
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +   A  ++  M   G +P  +T+NTL+ G  +  +  +   +   M E
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 133/246 (54%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G + + F YS++I+G C  G +  A +++  MD +GC  N   YN LI+G+C+     ++
Sbjct: 434 GKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDA 493

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + +YS+M   G  PTV+TYNTL  GL +  + + A  +  EM  +    + +TY + I G
Sbjct: 494 VRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP-RVGLMP 193
           L  +  I +A  +++ +     ++ +  ++ LI GLC  GK++ A  +F  +  +    P
Sbjct: 554 LFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP 613

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           N+VTYN ++ G    G +DKA  L+  +   G+ P+ +++NT + G    +   + ++LL
Sbjct: 614 NLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLL 673

Query: 254 HRMDER 259
             +  R
Sbjct: 674 DEVLSR 679



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 141/258 (54%), Gaps = 9/258 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L D + +R V P+   YSTL+ G      +D A +L   M  +G   +VV YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 61  LINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L+ G  K  + E+ + ++ +++   G RP + TYN +  GL +  + +   ++++ M  +
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLE 177
           ++  +  TY   I GLC++G +  AA ++    ++K  L I+A  Y+ L+ G C+ G+++
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYS--EIIKTGLVIDAAMYNSLVKGFCQAGRVQ 351

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA--PNCVTFNT 235
            AW+ + S    GL  N+ TYNIMI G  + G +D+A +L+ D+  K VA  P+ VTF T
Sbjct: 352 EAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGT 409

Query: 236 LMLGCIRNNETSKVVELL 253
           L+ G  +N   +K   + 
Sbjct: 410 LIHGLCQNGFANKAFTIF 427



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 75/331 (22%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+R+   +I+ G+  +A +Y++L+ GFC  G +  A + + S    G + N+ TYN 
Sbjct: 315 VDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTYNI 373

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           +I G   +  V+E++ L+ ++L K +   P  VT+ TL HGL +      A  +F+E + 
Sbjct: 374 MIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV 432

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAA--------------------------ELFRTLR 152
           S    +  +Y++ I+GLC  G +V+A                           +++RT  
Sbjct: 433 SGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSD 492

Query: 153 VLK---------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY----- 198
            ++         C   +  Y+ LIDGLCK  K + A  + + +   G  P++ TY     
Sbjct: 493 AVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIR 552

Query: 199 ------------------------------NIMIHGFCNDGQMDKAHDLFLDM-EAKGVA 227
                                         NI+IHG C+ G++D+A  +F DM E K   
Sbjct: 553 GLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP 612

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           PN VT+NTLM G        K   L   + E
Sbjct: 613 PNLVTYNTLMDGLYETGYIDKAATLWTSITE 643



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 5/181 (2%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS----DVAAETSTYNTFIDGLCKNGY 140
           G  P + ++N L        +   A   F  + H      +A    TYN  +  LC  G 
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           +  A  LF +LR  +       YS L+ GL K  +L+ A +L   +PR G+ P+VV YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 201 MIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++ G    G+ +K   ++  + +  G  PN  T+N ++ G  +     +V E+  RM   
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 260 N 260
           N
Sbjct: 294 N 294



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 78/142 (54%), Gaps = 1/142 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYN 59
           +D+A  +   ++ +G++ +  +++ LI G C  G++D A  +F  M +   C  N+VTYN
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYN 619

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL++G  +T  ++++  L++ +   G+ P +++YNT   GL    ++   ++L DE+   
Sbjct: 620 TLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679

Query: 120 DVAAETSTYNTFIDGLCKNGYI 141
            +     T+N  +  + K G I
Sbjct: 680 GIIPTVITWNILVRAVIKYGPI 701



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA  +  D+  ++   PN   Y+TL+DG   TG ID+A  L+ S+  +G   ++++YN
Sbjct: 595 VDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYN 654

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE 107
           T I G C    + E + L  E+LS+GI PTV+T+N L   + +   ++
Sbjct: 655 TRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 5/118 (4%)

Query: 144 AAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG----LMPNVVTY 198
           A + FR L  +L C  GI +++ L+D   +  +   A   F SL        + PN+ TY
Sbjct: 102 ALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           NI++   C  G +D+A  LF  +  + VAP+C+T++TLM G  + +     ++LL  M
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEM 219


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 38/298 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L  +M   G RPN+ +Y++LI GF  +G +  A  LF  M   G   +V+T+  
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+ + E++   + EM+  G +P VVTY T+  GL +I +V +A ++   M    
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC--------- 171
              ++ TY   +DG CK G + EAA+L   L        ++ YS L++GLC         
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490

Query: 172 ---------------------------KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                                      K G+L+ A  +FQ +   G  P+  TYNI+I+G
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 205 FCN--DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            C   + ++++A  L  D+E  G  P+ VT+  L +G  +  E  + V++L     R 
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE--IDRARELFVSMDINGCMHNVVTY 58
           +DEA R+   M+  G +P+A  Y+ LI+G C + E  ++RA  L   ++  G + + VTY
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
             L  G CK  +V+ ++ +  E  S+G    VV Y  L  GL    QV+ A+ LF EM  
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
              A + + Y   I+GL K   + +A + F  +     +  +  Y+ L+  LC  G ++ 
Sbjct: 642 QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701

Query: 179 AWELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A+  F+S L R  L+ +V+ Y+ +IHGFC   ++D A  LF DM ++G  P  VT  +L 
Sbjct: 702 AFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLF 761

Query: 238 LGCIRNNETSKVVELLHRM 256
            G +R+ +T K  ELL  M
Sbjct: 762 DGLVRSGKTEKAQELLQEM 780



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 130/253 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M + G  P+A  Y+T+IDG    G    A ++  +M    C+   VTY  
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK   +E +  L+  M + G RP  V Y +L HG  +  +++ A  LFDEM  + 
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+   IDGLCK+G   +AA+ F  +    C+  +  Y+ +I GL KIG++  A+
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + + +   G  P+ VTY  ++ GFC  G++D+A  L  +++    +PN   +++L+ G 
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGL 480

Query: 241 IRNNETSKVVELL 253
                  K ++ L
Sbjct: 481 CDGGSVEKTLDDL 493



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 130/256 (50%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  LL  + + G  P+A  Y+ L  G C  GE+DRA ++       G   +VV Y  
Sbjct: 559 VERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTA 618

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G C    V+ +++L+ EM+ +G  P    Y  + +GL ++ ++E A K FDEM    
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKG 678

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL--GIEAYSCLIDGLCKIGKLET 178
                +TY   +  LC  G + EA   F ++ + + EL   +  Y  LI G CK  K++ 
Sbjct: 679 QKPTVATYTALVQALCHAGNVDEAFHRFESM-LARGELVGSVMIYDALIHGFCKALKVDA 737

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +LF+ +   G +P  VT   +  G    G+ +KA +L  +M A G  P+  TF  ++ 
Sbjct: 738 ALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797

Query: 239 GCIRNNETSKVVELLH 254
           G  +++E+ K+++L+ 
Sbjct: 798 GLRKSDESGKLLKLVQ 813



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 1/247 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ PN F ++ LI  F  T   D A   F  M    C  ++ T+  L++  CK   
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204

Query: 71  VEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            E++  ++ EM++ G + P    +  +   L +  +V+ A ++F +M+      +   YN
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T IDGL K G+  EA ++   +    C      Y  L++ LCK G LE A ELF+ +   
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  PN V Y  +IHGF   G+M +A  LF +M   G  P+ +T   ++ G  ++    + 
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384

Query: 250 VELLHRM 256
            +    M
Sbjct: 385 AKSFEEM 391



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 122/250 (48%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           ++M    V P+  +++ ++        +  ARE+F  M+  G   + + YNT+I+G  K 
Sbjct: 214 EMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKA 273

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
              +E+L +   ML+K   PT VTY  L + L +   +E A +LF  M  S     +  Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            + I G  K+G + EA  LF  +        +  ++ +IDGLCK G  E A + F+ + R
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  PNVVTY  +I G    G++  A  +   M A G  P+ VT+  L+ G  +     +
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453

Query: 249 VVELLHRMDE 258
             +LL  +D+
Sbjct: 454 AAQLLDELDK 463



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM-HNVVTYNT 60
           D+A    ++M ++  +P+   +  L+D  C  G  ++A E+F  M   G +  +   +  
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++    K K V+E+  ++ +M   G  P  + YNT+  GL +    + ALK+ D M    
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   ++ LCK G +  A ELFR +           Y+ LI G  K G+++ A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G  P+V+T+ +MI G C  G  ++A   F +M   G  PN VT+ T++ G 
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 241 IRNNETSKVVELLHRM 256
            +    +    ++  M
Sbjct: 411 SKIGRVANAFRIMKGM 426



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 124/293 (42%), Gaps = 43/293 (14%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R++  MI  G  P++  Y  L+DGFC  G +D A +L   +D      N+  Y++L+N
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVN 478

Query: 64  GYC------------------------------------KTKDVEESLNLYSEMLSKGIR 87
           G C                                    KT  ++E+  ++  M+S+G +
Sbjct: 479 GLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538

Query: 88  PTVVTYNTLFHGLFEIHQ--VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           P   TYN L +GL    +  VE A  L  +++      +  TY     GLCK G +  A 
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++            + AY+ L  GLC  G+++ A  LFQ + R G  P+   Y  +I+G 
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNNETSKVVELLHRMD 257
               +++ A   F +M  KG  P   T+  L+   C   N    V E  HR +
Sbjct: 659 IKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGN----VDEAFHRFE 707



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 36/245 (14%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G  H+V TYN L+N     K+  +   ++ EML  GI P   ++N L        + + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF--------------------R 149
           +  F+ M+      +  T+   +D LCK G   +A E+F                    R
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 150 TL--------------RVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           TL              ++ KC    +  AY+ +IDGL K G  + A ++  ++     +P
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
             VTY I+++  C  G +++A +LF  M A G  PN V + +L+ G  ++    +   L 
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 254 HRMDE 258
             M E
Sbjct: 354 DEMVE 358



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 1/116 (0%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA    + M+ RG +  +  +Y  LI GFC   ++D A +LF  M   G +   VT  
Sbjct: 699 VDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSA 758

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           +L +G  ++   E++  L  EM + G  P   T+  +  GL +  +    LKL  E
Sbjct: 759 SLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814


>gi|224137548|ref|XP_002322585.1| predicted protein [Populus trichocarpa]
 gi|222867215|gb|EEF04346.1| predicted protein [Populus trichocarpa]
          Length = 243

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 123/218 (56%), Gaps = 19/218 (8%)

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           M + GCM NV++YN LING CK   ++E+  L+ EM  +G+ P   +YNTL  GLF++ +
Sbjct: 1   MHVQGCMPNVLSYNILINGSCKALRIDEAKQLFDEMSFRGLIPNTASYNTLISGLFQVGR 60

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCK----NGYIVEAAELFRTLRVLKCELGIE 161
           +  A +LF +M     + +  TY+  +DGL K    N Y             L  +L I 
Sbjct: 61  ILEAKELFKDMHAQGCSPDLVTYSILLDGLSKQEMQNNY-------------LNPDLVI- 106

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            Y+ LID +CK GKLE A ELF  L   GL+P+V ++  +I G C +G +D+A+  F  M
Sbjct: 107 -YNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQM 165

Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           E  G  P+C ++N ++ G ++NN  S+  +L   M +R
Sbjct: 166 ERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDR 203



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 119/219 (54%), Gaps = 11/219 (5%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           +G  PN   Y+ LI+G C    ID A++LF  M   G + N  +YNTLI+G  +   + E
Sbjct: 4   QGCMPNVLSYNILINGSCKALRIDEAKQLFDEMSFRGLIPNTASYNTLISGLFQVGRILE 63

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +  L+ +M ++G  P +VTY+ L  GL +            EMQ++ +  +   YN  ID
Sbjct: 64  AKELFKDMHAQGCSPDLVTYSILLDGLSK-----------QEMQNNYLNPDLVIYNILID 112

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            +CK+G + +A ELF  L V      + +++ +I GLC+ G L+ A++ F+ + R G  P
Sbjct: 113 AMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPP 172

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +  +YN+++ GF  +    +A  LF +M  +G + + +T
Sbjct: 173 DCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALT 211



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 11/200 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L D M  RG+ PN   Y+TLI G    G I  A+ELF  M   GC  ++VTY+ 
Sbjct: 26  IDEAKQLFDEMSFRGLIPNTASYNTLISGLFQVGRILEAKELFKDMHAQGCSPDLVTYSI 85

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K            EM +  + P +V YN L   + +  ++E A +LF ++    
Sbjct: 86  LLDGLSK-----------QEMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKG 134

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  ++ + I GLC+ G + EA + FR +    C     +Y+ ++ G  +      A 
Sbjct: 135 LLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAE 194

Query: 181 ELFQSLPRVGLMPNVVTYNI 200
           +LFQ +   G   + +T  +
Sbjct: 195 QLFQEMFDRGFSADALTRTL 214



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 66/123 (53%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           + P+  +Y+ LID  C +G+++ ARELF+ + + G + +V ++ ++I+G C+   ++E+ 
Sbjct: 100 LNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAY 159

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
             + +M   G  P   +YN +  G  + +    A +LF EM     +A+  T     D L
Sbjct: 160 KAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLL 219

Query: 136 CKN 138
            K+
Sbjct: 220 SKD 222


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 4/255 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  LL  M + G  P+A +Y T+I   C  G +  A  L   M + GC  +V T++ +
Sbjct: 192 NEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G C    V E+  L   M++KG  P V+TY  L  GL  + Q + A  +   +   +V
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNV 311

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 +NT I G    G + EA EL+ T+ +  C+     YS L+ GLCK+G++ +A  
Sbjct: 312 V----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVR 367

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + + + G  PNVVTY I++H FC +G  D    L  +M AKG+  N   +N ++    
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427

Query: 242 RNNETSKVVELLHRM 256
           ++    + + L+  M
Sbjct: 428 KDGRMDEAMGLIQEM 442



 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 133/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A RLL  M ++G  PN   Y+ ++  FC  G  D  R L   M   G   N   YN 
Sbjct: 362 ISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 421

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK   ++E++ L  EM S+G  P + +YNT+ + L    Q+E A  +F+ +    
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V A   TYNT I  L ++G   +A  L + + +  C L + +Y+ LI  +CK G ++ + 
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   G+ PN V+YNI+I   C + ++  A +L   M  +G+AP+ VT+NTL+ G 
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 241 IRNNETSKVVELLHRMDERN 260
            +       + LL ++   N
Sbjct: 602 CKMGWMHAALNLLEKLHNEN 621



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 31/288 (10%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---------------------- 40
           EA+RL+D M+ +G  P    Y  L+ G C   + D AR                      
Sbjct: 263 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCL 322

Query: 41  ---------ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
                    EL+ +M + GC  +  TY+ L++G CK   +  ++ L  EM  KG  P VV
Sbjct: 323 AEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVV 382

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           TY  + H   +    +    L +EM    +   +  YN  I  LCK+G + EA  L + +
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
           R   C   I +Y+ +I  LC   ++E A  +F++L   G++ N +TYN +IH    DG+ 
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 502

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             A  L  +M   G + + V++N L+    ++    + + LL  M E+
Sbjct: 503 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 1/228 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  L+  M  +G  P+   Y+T+I   C   +++ A  +F ++   G + N +TYNT
Sbjct: 432 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 491

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+   +    ++++ L  EM+  G    VV+YN L   + +   V+ +L L +EM    
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +YN  I  LCK   + +A EL + +        I  Y+ LI+GLCK+G +  A 
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
            L + L    + P+++TYNI+I   C    +D A  + L+     V P
Sbjct: 612 NLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA-MLLNRAMAAVCP 658



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 82/157 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL   MI  G   +   Y+ LI   C  G +DR+  L   M   G   N V+YN LI
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK + V ++L L  +ML++G+ P +VTYNTL +GL ++  +  AL L +++ + +V 
Sbjct: 564 SELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVH 623

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
            +  TYN  I   CK   + +AA L        C +G
Sbjct: 624 PDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVG 660



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 9/210 (4%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEH 108
           G   +  +YN +++   +     ++L LY  M+ +  + PT  T+      L  + +   
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           AL L   M       +   Y T I  LC  G + EAA L   + ++ C   +  +  ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G+C +G++  A  L   +   G MP V+TY  ++ G C   Q D+A  +       G  P
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML------GRVP 307

Query: 229 --NCVTFNTLMLGCIRNNETSKVVELLHRM 256
             N V FNT++ GC+   + ++  EL   M
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETM 337



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 1/177 (0%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFIDGLCKNGYIVE 143
           G++P+  +YN +   L        AL L+  M H D V   T T+      LC+ G   E
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A  L R +    C      Y  +I  LC  G +  A  L   +  +G   +V T++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G C  G++ +A  L   M  KG  P  +T+  L+ G  R  +  +   +L R+ E N
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 310


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 143/310 (46%), Gaps = 51/310 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L + M + G+  + + Y+ ++D FC  G I++AR+ F  M   GC  NVVTY  
Sbjct: 458 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 517

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           LI+ Y K K V  +  L+  MLS+G  P +VTY+ L  G  +  QVE A ++F+ M    
Sbjct: 518 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 577

Query: 117 ----------QHSDVAAETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
                     Q+ D +   +  TY   +DG CK+  + EA +L   + +  CE     Y 
Sbjct: 578 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 637

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGL--------------------------------- 191
            LIDGLCK+GKL+ A E+   +   G                                  
Sbjct: 638 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 697

Query: 192 --MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
              PNVV Y  MI G C  G+ D+A+ L   ME KG  PN VT+  ++ G     +    
Sbjct: 698 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 757

Query: 250 VELLHRMDER 259
           +ELL RM  +
Sbjct: 758 LELLERMGSK 767



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 115/206 (55%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           RPN   Y  L+DGFC +  ++ AR+L  +M + GC  N + Y+ LI+G CK   ++E+  
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           + +EM   G   T+ TY++L    F++ + + A K+  +M  +  A     Y   IDGLC
Sbjct: 655 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 714

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G   EA +L + +    C+  +  Y+ +IDG   IGK+ET  EL + +   G+ PN V
Sbjct: 715 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 774

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDME 222
           TY ++I   C +G +D AH+L  +M+
Sbjct: 775 TYRVLIDHCCKNGALDVAHNLLEEMK 800



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 4/254 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D AS++L  M++    PN  +Y+ +IDG C  G+ D A +L   M+  GC  NVVTY  +
Sbjct: 685 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 744

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+     +E  L L   M SKG+ P  VTY  L     +   ++ A  L +EM+ +  
Sbjct: 745 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 804

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T+ Y   I+G   N   +E+  L   +        +  Y  LID L K  +LE A  
Sbjct: 805 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 862

Query: 182 LFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L + +      L+    TYN +I   C   +++ A  LF +M  KGV P   +F +L+ G
Sbjct: 863 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 922

Query: 240 CIRNNETSKVVELL 253
             RN++ S+ + LL
Sbjct: 923 LFRNSKISEALLLL 936



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 57/308 (18%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L++M+  G  P+  ++++L+  +C +G+   A +L   M   G M   V YN LI   
Sbjct: 317 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 376

Query: 66  CKTKD-----------------------------------------VEESLNLYSEMLSK 84
           C  KD                                          E++ ++  EM+ +
Sbjct: 377 CGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 436

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P   TY+ + + L    ++E A  LF+EM+   + A+  TY   +D  CK G I +A
Sbjct: 437 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 496

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            + F  +R + C   +  Y+ LI    K  K+  A ELF+++   G +PN+VTY+ +I G
Sbjct: 497 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 556

Query: 205 FCNDGQMDKAHDLF-----------LDMEAK-----GVAPNCVTFNTLMLGCIRNNETSK 248
            C  GQ++KA  +F           +DM  K        PN VT+  L+ G  +++   +
Sbjct: 557 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 616

Query: 249 VVELLHRM 256
             +LL  M
Sbjct: 617 ARKLLDAM 624



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 19/268 (7%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  ++  MI +G  P+   YS +++  C   +++ A  LF  M   G + +V TY  +
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 483

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK   +E++   ++EM   G  P VVTY  L H   +  +V +A +LF+ M     
Sbjct: 484 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL----RVLKCEL------------GIEAYSC 165
                TY+  IDG CK G + +A ++F  +     V   ++             +  Y  
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 603

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DG CK  ++E A +L  ++   G  PN + Y+ +I G C  G++D+A ++  +M   G
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663

Query: 226 VAPNCVTFNTLM---LGCIRNNETSKVV 250
                 T+++L+       R +  SKV+
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVL 691



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +    M+  GV  N    S+     C  G+ ++A  +   M   G + +  TY+ 
Sbjct: 388 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 447

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  C    +E +  L+ EM   G+   V TY  +     +   +E A K F+EM+   
Sbjct: 448 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 507

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   I    K   +  A ELF T+    C   I  YS LIDG CK G++E A 
Sbjct: 508 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567

Query: 181 ELFQSL------PRVGLM----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           ++F+ +      P V +           PNVVTY  ++ GFC   ++++A  L   M  +
Sbjct: 568 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 627

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G  PN + ++ L+ G  +  +  +  E+   M E
Sbjct: 628 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 661



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 93/242 (38%), Gaps = 13/242 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL D       RP+   Y+ LI  F     +D A  +   M +     +  T   
Sbjct: 179 LEELGRLKDFRF----RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 234

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
                CK     E+L L     ++   P  V Y  L  GL E    E A+   + M+ + 
Sbjct: 235 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 291

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+T + G      +     +   + +  C    + ++ L+   C  G    A+
Sbjct: 292 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 351

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ------MDKAHDLFLDMEAKGVAPNCVTFN 234
           +L + + + G MP  V YNI+I   C D        +D A   + +M A GV  N +  +
Sbjct: 352 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVS 411

Query: 235 TL 236
           + 
Sbjct: 412 SF 413



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 15/250 (6%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM------DINGCMHNVVTYNTLINGYC 66
           Q G +  A VY+ L+D   +  + ++  E F+        ++ G   NV     L+  +C
Sbjct: 117 QIGYKHTAPVYNALVD-LIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNV-----LVRKHC 170

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +      +L     +     RP+  TYN L     +  +++ A  +  EM  +++  +  
Sbjct: 171 RNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGF 230

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T   F   LCK G   EA  L  T   +   +    Y+ LI GLC+    E A +    +
Sbjct: 231 TLRCFAYSLCKVGKWREALTLVETENFVPDTV---FYTKLISGLCEASLFEEAMDFLNRM 287

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
                +PNVVTY+ ++ G  N  Q+ +   +   M  +G  P+   FN+L+     + + 
Sbjct: 288 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 347

Query: 247 SKVVELLHRM 256
           S   +LL +M
Sbjct: 348 SYAYKLLKKM 357



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 4/197 (2%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           TYN LI  + K   ++ +  ++ EM    +R    T     + L ++ +   AL L   +
Sbjct: 196 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---V 252

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +  +   +T  Y   I GLC+     EA +    +R   C   +  YS L+ G     +L
Sbjct: 253 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 312

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
                +   +   G  P+   +N ++H +C  G    A+ L   M   G  P  V +N +
Sbjct: 313 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN-I 371

Query: 237 MLGCIRNNETSKVVELL 253
           ++G I  ++ S   +LL
Sbjct: 372 LIGSICGDKDSLNFDLL 388



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 72/189 (38%), Gaps = 39/189 (20%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+ M  +GV PN   Y  LID  C  G +D A  L   M       +   Y  +I G+ 
Sbjct: 760 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF- 818

Query: 67  KTKDVEESLNLYSEMLSKGIRP---------------------------------TVV-- 91
             K+  ESL L  E+      P                                 T+V  
Sbjct: 819 -NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 877

Query: 92  --TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
             TYN+L   L   ++VE A +LF EM    V  E  ++ + I GL +N  I EA  L  
Sbjct: 878 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 937

Query: 150 TLRVLKCEL 158
            +  + C L
Sbjct: 938 FISHMVCPL 946



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNT 60
           E+  LLD + Q    P   VY  LID       ++ A  L   V+      +    TYN+
Sbjct: 824 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 883

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           LI   C    VE +  L+SEM  KG+ P + ++ +L  GLF   ++  AL L D + H
Sbjct: 884 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 941


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 131/241 (54%), Gaps = 2/241 (0%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   Y+TLI GFC  G+++RA +L   M   G   +VVT+++++   C T ++  ++  +
Sbjct: 104 NHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF 163

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E  S    P  V +N L HGL + +Q+  A ++ +EM    +  +  TYN+ IDGLCK+
Sbjct: 164 RE--SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKS 221

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             + EA +L  T+   K    +  Y+ LI G CK G    A +L + + + G  P+VVT+
Sbjct: 222 YRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N +I GFC   ++DKA ++   M+    APN VT+N L+ G       ++  ELL  MD 
Sbjct: 282 NSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDG 341

Query: 259 R 259
           R
Sbjct: 342 R 342



 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 141/259 (54%), Gaps = 2/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A +LL  M +RG  P+   +S+++   C TG + RA + F   +   C  + V +N 
Sbjct: 121 MERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF--RESVECAPDSVLFNI 178

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G CK   + E+  +  EM  +GI P VVTYN+L  GL + +++E A +L + M    
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYNT I G CK G    A +L   +        +  ++ LI G C+  K++ A 
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + +    PN+VTYN++I G C+ G+ ++A +L  +M+ +G+ P+ +T+N+L+   
Sbjct: 299 EVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIF 358

Query: 241 IRNNETSKVVELLHRMDER 259
            RN +  +  ++ + M ER
Sbjct: 359 CRNFQIEQAFQIQNLMVER 377



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 131/239 (54%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P++ +++ L+ G C   ++  AR++   M   G + +VVTYN+LI+G CK+  +EE+  L
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQL 230

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
              M+ + +RP +VTYNTL +G  +      A +L + M  S    +  T+N+ I G C+
Sbjct: 231 LETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQ 290

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              I +A E+   ++   C   +  Y+ LI GLC  G+   A EL   +   G++P+++T
Sbjct: 291 KSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIIT 350

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           YN +I  FC + Q+++A  +   M  +GV P+ +++ TL +  +++    +   LL  M
Sbjct: 351 YNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNM 409



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 136/259 (52%), Gaps = 6/259 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA +LL+ M++R VRPN   Y+TLI G+C TG    A +L   M  +G   +VVT+N+
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNS 283

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G+C+   ++++  +   ++ KG+  P +VTYN L  GL +  +   A +L  EM   
Sbjct: 284 LISGFCQKSKIDKACEVL-HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGR 342

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL--GIEAYSCLIDGLCKIGKLE 177
            +  +  TYN+ I   C+N + +E A   + L V +  +  GI +Y  L   L K  + +
Sbjct: 343 GILPDIITYNSLIGIFCRN-FQIEQAFQIQNLMVERGVIPDGI-SYCTLAVALLKSERFD 400

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A+ L  ++   G +PN+ T+N ++ G C   ++D+A  L   M   G  P   T+  L+
Sbjct: 401 EAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLV 460

Query: 238 LGCIRNNETSKVVELLHRM 256
            G  +        E+L  M
Sbjct: 461 TGLCKAGRVDDAKEVLVMM 479



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 116/225 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L++ MIQ G  P+   +++LI GFC   +ID+A E+   M    C  N+VTYN LI+
Sbjct: 262 AHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLIS 321

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C      E+  L SEM  +GI P ++TYN+L        Q+E A ++ + M    V  
Sbjct: 322 GLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIP 381

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  +Y T    L K+    EA  L   +        +  ++ L++GLC   +L+ A  L 
Sbjct: 382 DGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLL 441

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
             + RVG  P   TY +++ G C  G++D A ++ + M ++G+ P
Sbjct: 442 AVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 3/232 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L LM +    PN   Y+ LI G C  G  + A EL   MD  G + +++TYN+
Sbjct: 294 IDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNS 353

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  +C+   +E++  + + M+ +G+ P  ++Y TL   L +  + + A  L D M  + 
Sbjct: 354 LIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAG 413

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+N+ ++GLC +  + EA  L   +R + C+     Y  L+ GLCK G+++ A 
Sbjct: 414 AIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAK 473

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA---HDLFLDMEAKGVAPN 229
           E+   +   G+ P V +   ++H    +G+ D A    D  +  E+K   P+
Sbjct: 474 EVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPS 525



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 3/206 (1%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLY-SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           +HN  T N L+    K +   ++  ++  E+L +      +TYNTL  G  +   +E A 
Sbjct: 66  IHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAF 125

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +L  EM+    + +  T+++ +  LC  G +  A + FR    ++C      ++ L+ GL
Sbjct: 126 QLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGL 183

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK  +L  A ++ + +   G++P+VVTYN +I G C   +M++A  L   M  + V PN 
Sbjct: 184 CKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNL 243

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
           VT+NTL+ G  +   T    +L+ RM
Sbjct: 244 VTYNTLIYGYCKTGCTGLAHQLIERM 269



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  LLD M   G  PN F +++L++G C +  +D AR L   M   GC     TY  L
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVL 459

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G CK   V+++  +   M+S+GI+P V +  T+ H L    + + AL  FD++  ++ 
Sbjct: 460 VTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAES 519

Query: 122 AAETSTYNTFID 133
            A   +Y   ++
Sbjct: 520 KACDPSYQKLLE 531


>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Brachypodium distachyon]
          Length = 821

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 138/288 (47%), Gaps = 35/288 (12%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +  L+ Q G+RP+   Y+TL++ +  +G+ ++ARE F  M  N C  N+V+YN LI+ Y 
Sbjct: 389 IFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYG 448

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH------------------ 108
                +E+++L  EM   GI P VV+ +TL        Q+                    
Sbjct: 449 SAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIV 508

Query: 109 -----------------ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
                            AL+L+  M  S+V  +  TYN  I GLCK G   E+ + F  +
Sbjct: 509 CYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDM 568

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
             L+  L  E YS LI    K GKL  A   F S+   G +P+V+TY  MI  + +DG  
Sbjct: 569 VDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSW 628

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             A DLF +ME   V P+ +  ++LM    R ++  +V++L+  M E+
Sbjct: 629 RNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEK 676



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M +   +P+A +Y++LI      G+   A  +   M       +  TYN 
Sbjct: 171 IDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNN 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN      + +++L L  +M   G+ P +VT+N +        Q   A+  F+ M+ ++
Sbjct: 231 VINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGAN 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGLCKIGKLET 178
           +A +T T N  I  L K+G   EA EL  ++R    +C   +  Y+ ++      GK+E 
Sbjct: 291 IAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVED 350

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
              +F  +   G+ PN+V+YN ++  + + G    A  +F  ++  G+ P+ V++ TL+ 
Sbjct: 351 CKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLN 410

Query: 239 GCIRNNETSKVVELLHRM 256
              R+ +  K  E    M
Sbjct: 411 AYGRSGQPEKAREAFKEM 428



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 37/293 (12%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  ++D M++  + P+   Y+ +I+     G   +A EL   M  NG   ++VT+N +++
Sbjct: 209 AINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLS 268

Query: 64  GY---------------------------------CKTKDVE--ESLNLYSEMLSKGIR- 87
            +                                 C  KD +  E++ L + M  K  + 
Sbjct: 269 AFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQC 328

Query: 88  -PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P VVTY ++ H  +   +VE    +FD M    V     +YN  +      G   +A  
Sbjct: 329 PPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALG 388

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +F+ L+       + +Y+ L++   + G+ E A E F+ + +    PN+V+YN +I  + 
Sbjct: 389 IFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYG 448

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + G   +A  L  +ME  G+ P+ V+ +TL+  C R  + +K+  +L     R
Sbjct: 449 SAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSR 501



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 113/258 (43%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++   + D+M+  GV+PN   Y+ L+  +   G    A  +F  +  NG   +VV+Y T
Sbjct: 348 VEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTT 407

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N Y ++   E++   + EM     RP +V+YN L          + A+ L  EM+   
Sbjct: 408 LLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDG 467

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  + +T +    +   I +   +    +    +L I  Y+  I      G    A 
Sbjct: 468 IPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKAL 527

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL+  +    + P+ VTYNI+I G C  G+  ++   F DM    +      +++L+   
Sbjct: 528 ELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSY 587

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  + ++       M E
Sbjct: 588 VKQGKLTEAESTFSSMKE 605



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 112/255 (43%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  M + G+ P+    STL+       +I +   +  +    G   N+V YN+ I
Sbjct: 455 EAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGI 514

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             Y    D  ++L LY+ M++  + P  VTYN L  GL ++ +   +LK F++M    + 
Sbjct: 515 GSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIP 574

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                Y++ I    K G + EA   F +++   C   +  Y+ +I+     G    AW+L
Sbjct: 575 LTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDL 634

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +    + P+ +  + ++       Q ++   L   M+ K +  N   +  ++  C  
Sbjct: 635 FKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSM 694

Query: 243 NNETSKVVELLHRMD 257
             +     E++  +D
Sbjct: 695 LRDWKTASEIIEHLD 709



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 38/239 (15%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           +  LI      G +  A  +F  M    N C  N + Y  +I  + +   ++++  L+ E
Sbjct: 122 FPLLIREITFAGSLQHAVHVFRWMKNQENYCARNDI-YGMMIRLHARHSQIDQARGLFFE 180

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M     +P    YN+L H      Q   A+ + D+M  + +    +TYN           
Sbjct: 181 MQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNN---------- 230

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
                                    +I+     G  + A EL + + R G+ P++VT+NI
Sbjct: 231 -------------------------VINACGAAGNWKKALELCKKMTRNGVGPDLVTHNI 265

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++  F N  Q  KA   F  M+   +AP+  T N ++   +++ +  + +ELL+ M E+
Sbjct: 266 VLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREK 324



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 98/236 (41%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           VYS+LI  +   G++  A   F SM  +GC+ +V+TY  +I  Y        + +L+ EM
Sbjct: 579 VYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEM 638

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
               ++P  +  ++L   L    Q E  L+L + M+   +      Y   I         
Sbjct: 639 EGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDW 698

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
             A+E+   L      + +   + L+  L K GK E   +LF  +        V TY ++
Sbjct: 699 KTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVL 758

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           +      G+  K  ++   ME  GV+P    +  ++    R+N    V  +  +++
Sbjct: 759 LRNLLAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVLPYIWRDNSMDYVTLMQEKIN 814



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 2/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTL 61
           +A  L  +M+   V P+A  Y+ LI G C  G+   + + F  M D+   +   V Y++L
Sbjct: 525 KALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEV-YSSL 583

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I  Y K   + E+ + +S M   G  P V+TY  +     +     +A  LF EM+ + V
Sbjct: 584 ICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTV 643

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +    ++ ++ L +        +L   ++     L  +AY  +I     +   +TA E
Sbjct: 644 QPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASE 703

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           + + L       +V T N ++      G+ +    LF  M +        T+  L+   +
Sbjct: 704 IIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLL 763

Query: 242 RNNETSKVVELLHRMDE 258
              +  K +E+L  M++
Sbjct: 764 AVGKWRKYIEVLQWMED 780



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 1/157 (0%)

Query: 105 QVEHALKLFDEMQHSD-VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
            ++HA+ +F  M++ +   A    Y   I    ++  I +A  LF  ++  +C+   + Y
Sbjct: 134 SLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIY 193

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           + LI    + G+   A  +   + R  + P+  TYN +I+     G   KA +L   M  
Sbjct: 194 NSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTR 253

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            GV P+ VT N ++      ++ SK +     M   N
Sbjct: 254 NGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGAN 290



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 81/212 (38%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA      M + G  P+   Y+ +I+ +   G    A +LF  M+ N    + +  ++
Sbjct: 593 LTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSS 652

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+    +    E  L L   M  K I      Y  +      +   + A ++ + +  S 
Sbjct: 653 LMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSL 712

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    T N  +  L K G      +LF  +      +G+  Y+ L+  L  +GK     
Sbjct: 713 SSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYI 772

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           E+ Q +   G+ P +  Y  ++     D  MD
Sbjct: 773 EVLQWMEDAGVSPTLYMYQNVLPYIWRDNSMD 804


>gi|255660976|gb|ACU25657.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 376

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G ID++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  +++ ++++ + M+  G +P V  YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+G CKN    EA  L + L     + G+  YS L++GLC   K+  A 
Sbjct: 195 CSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCLDHKVARAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+I G C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 125/220 (56%), Gaps = 1/220 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ MI+ G +PN  VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK K   E+ NL  E+L KG+ P V+TY+ L  GL   H+V  AL+L++++    
Sbjct: 205 LINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCLDHKVARALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  + + KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
            ++  + R GL P++++YNI + G C+  ++  A  LFLD
Sbjct: 325 VIWARILRNGLEPDIISYNITLEGLCSCNRISDAI-LFLD 363



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 131/253 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G   +AF YS +I+G C    +DRA  +   M  +GC  NV  YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +G  +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  ++GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LDPGVITYSMLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +      PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNLWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGL 349

Query: 241 IRNNETSKVVELL 253
              N  S  +  L
Sbjct: 350 CSCNRISDAILFL 362



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 65/113 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A +L + +  +G +P+  +++ LI G C  G++  A  L+  M++  C  N+V++NTL+
Sbjct: 252 RALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKCAPNLVSHNTLM 311

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
            G+ K  D+  +L +++ +L  G+ P +++YN    GL   +++  A+   D+
Sbjct: 312 EGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLDD 364



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   ++TL++GF   G+I  A  ++  +  NG   ++++YN  + G C    + +++  
Sbjct: 302 PNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILF 361

Query: 78  YSEMLSKGIRPTVVTYNT 95
             + ++K I   V+T NT
Sbjct: 362 LDDAVTKKI---VLTKNT 376


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 135/252 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M +RGV PN  V++TLID  C  G +    EL   M   G   ++V YN 
Sbjct: 330 IQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNA 389

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L NG C+ +D++ + ++  EM + G++P  VTY TL  G  +  +++ A+++  EM    
Sbjct: 390 LANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEG 449

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +  TY T I GL K+G  V++  +   +     E     Y+ +ID  CK   ++T +
Sbjct: 450 VALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGF 509

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + +   G  P VVTYN++++GFC  GQM  A  L   M   GV P+ +T+N L+ G 
Sbjct: 510 KLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGH 569

Query: 241 IRNNETSKVVEL 252
            ++ +     EL
Sbjct: 570 CKHGKVRDAEEL 581



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 132/248 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  GV P A  ++ L+     +G++  AR +F  M   G    VVT+NTL++G CK  D
Sbjct: 235 LLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASD 294

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +  L   M   G+ P V TY     GL +  +++ A+++F+EM+   V   T  + T
Sbjct: 295 LNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTT 354

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK G +    EL R +     +  + AY+ L +GLC++  L+ A ++ + +   G
Sbjct: 355 LIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNG 414

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ VTY  +I GFC +G++D A ++  +M  +GVA + VT+ TL+ G  ++  +    
Sbjct: 415 LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSE 474

Query: 251 ELLHRMDE 258
            +L  M E
Sbjct: 475 RILCEMME 482



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  + D M++RGV P    ++TL+ G C   +++ A  L   M   G   +V TY   +
Sbjct: 262 SARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFM 321

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CK   +++++ ++ EM  +G+ P  V + TL     +   V   L+L  EM    + 
Sbjct: 322 QGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIK 381

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YN   +GLC+   +  A ++   +R    +     Y+ LIDG CK G+L+ A E+
Sbjct: 382 TDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEM 441

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q +   G+  + VTY  +I G    G+   +  +  +M   G+ P+  T+  ++    +
Sbjct: 442 KQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCK 501

Query: 243 NNETSKVVELLHRMDER 259
           N++     +LL  M  +
Sbjct: 502 NSDVKTGFKLLKEMQNK 518



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 11/204 (5%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            ++ L+N   +   V E+   Y ++L  G+ P    +N L   +    ++  A  +FDEM
Sbjct: 214 AWSDLMN---RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEM 270

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCK 172
               V     T+NT + G+CK   +  A      LR L  + G+      Y   + GLCK
Sbjct: 271 LRRGVPPTVVTFNTLMSGMCKASDLNSA----NALRGLMAKAGVAPDVYTYGAFMQGLCK 326

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            G+++ A E+F+ +   G+ PN V +  +I   C +G +    +L  +M  +G+  + V 
Sbjct: 327 AGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVA 386

Query: 233 FNTLMLGCIRNNETSKVVELLHRM 256
           +N L  G  R  +     +++  M
Sbjct: 387 YNALANGLCRVRDLKAANDIVEEM 410



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 2/111 (1%)

Query: 151 LRVLKCELGIEA--YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           L++L   +  EA  ++ L+  + + GKL +A  +F  + R G+ P VVT+N ++ G C  
Sbjct: 233 LQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKA 292

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             ++ A+ L   M   GVAP+  T+   M G  +       VE+   M ER
Sbjct: 293 SDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRER 343



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           +LL  M  +G +P    Y+ +++GFC+ G++  A  L  +M   G   + +TYN L++G+
Sbjct: 510 KLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGH 569

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           CK   V ++  L S   +KG+      Y +L +
Sbjct: 570 CKHGKVRDAEELKS---AKGMVSDFGLYTSLIN 599


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +    +     PN   Y+ LID  C  G +D A ++   M+      NVVT+++
Sbjct: 365 IDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSS 424

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING  K   V ++ +   EM  +GI P VVTY T+  G F+    E AL ++ EM    
Sbjct: 425 IINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEG 484

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V       ++ ++GL KNG I +A  LFR +      L    Y+ LIDGL K G L  A+
Sbjct: 485 VEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAF 544

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ Q L    L+P+ V YN+ I+  C  G+  +A     +M++ G+ P+ VT+NT++   
Sbjct: 545 KVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQ 604

Query: 241 IRNNETSKVVELLHRM 256
            R  +T+K ++LL+ M
Sbjct: 605 SREGKTAKALKLLNGM 620



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 141/297 (47%), Gaps = 37/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFV--YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +D A+ L ++M++ G      V  +++L+DG+C  G+++ A  +   M   G   +VV Y
Sbjct: 153 VDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGY 212

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N+L+ G C+  +V+ + ++   M   G+ P VVTY          + V+ A  L++EM  
Sbjct: 213 NSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVR 272

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-----------------KCELGIE 161
             V  +  T +  + GLCK+G   EA  LFR +  +                 K + G E
Sbjct: 273 KGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNE 332

Query: 162 A------------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           +                  Y+ L+D LCK GK++ A ++F+        PN VTY ++I 
Sbjct: 333 SLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLID 392

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             C  G +D A  +  +ME K ++PN VTF++++ G ++     K  + +  M ER 
Sbjct: 393 ALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 124/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + M+++GV P+    S L+ G C  G    A  LF  M+  G   N VTY  
Sbjct: 260 VDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K +   ESL+L  E++S+G+   ++ Y  L   L +  +++ A  +F      +
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   ID LCK G +  A ++   +        +  +S +I+GL K G +  A 
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKAT 439

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +  + +   G+ PNVVTY  +I G       + A D++ +M  +GV  N    ++L+ G 
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N +  K   L   M+ER 
Sbjct: 500 KKNGKIEKAEALFREMNERG 519



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING------------ 50
           +A +LL+ M +  ++PN   YSTLI G    G +++A+ L   M  +G            
Sbjct: 612 KALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVL 671

Query: 51  --CMH---------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
             C                       ++  YNTL+   C      +++ +  EM  +GI 
Sbjct: 672 QACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIA 731

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P  +T+N L  G F+   +++A   +D+M +  ++   +T+NT + GL   G I E+  +
Sbjct: 732 PDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMV 791

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              ++    E     Y  L+ G  K      A  L+  +   G +P V TYN +I  F  
Sbjct: 792 LNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSK 851

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G M +A +LF +M+ +GV P   T++ L+ G  +    ++V + L  M E+ 
Sbjct: 852 VGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKG 904



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 35/264 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  GV  N F+  +L++G    G+I++A  LF  M+  G + + V Y TLI+G  KT +
Sbjct: 480 MLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +  +  E+  K + P  V YN   + L  + + + A    +EMQ + +  +  TYNT
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I    + G   +A +L   ++    +  +  YS LI GL + G +E A  L   +   G
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659

Query: 191 LMPNVVT-----------------------------------YNIMIHGFCNDGQMDKAH 215
             P  +T                                   YN ++   C +G   KA 
Sbjct: 660 FSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLG 239
            +  +M  +G+AP+ +TFN L+LG
Sbjct: 720 VVLEEMSGRGIAPDTITFNALILG 743



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 4/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGF--CLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A+  +  M +RG+ PN   Y T+IDG   CL  E   A +++  M   G   N    ++
Sbjct: 437 KATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEA--ALDVYHEMLCEGVEVNKFIVDS 494

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K   +E++  L+ EM  +G+    V Y TL  GLF+   +  A K+  E+   +
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN 554

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN FI+ LC  G   EA      ++    +     Y+ +I    + GK   A 
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   + R  + PN++TY+ +I G    G ++KA  L  +M + G +P  +T   ++  C
Sbjct: 615 KLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQAC 674

Query: 241 IRNNETSKVVELLHRM 256
            +   +  ++E+   M
Sbjct: 675 SQGRRSDLILEIHEWM 690



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 128/295 (43%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M +RGV  +   Y+TLIDG   TG +  A ++   +     + + V YN 
Sbjct: 505 IEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNV 564

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            IN  C     +E+ +   EM S G++P  VTYNT+        +   ALKL + M+ S 
Sbjct: 565 FINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSS 624

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-------------RVLK-CELG------- 159
           +     TY+T I GL + G + +A  L   +             RVL+ C  G       
Sbjct: 625 IKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLIL 684

Query: 160 --------------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                         I  Y+ L+  LC  G    A  + + +   G+ P+ +T+N +I G 
Sbjct: 685 EIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGH 744

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              G +D A   +  M   G++PN  TFNTL+ G        +   +L+ M +R 
Sbjct: 745 FKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG 799



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 14/235 (5%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           + M+  G+  +  VY+TL+   C  G   +A  +   M   G   + +T+N LI G+ K+
Sbjct: 688 EWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKS 747

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             ++ + + Y +ML  GI P V T+NTL  GL    ++  +  + +EM+   +     TY
Sbjct: 748 GHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTY 807

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCEL-------GIEAYSCLIDGLCKIGKLETAWE 181
           +  + G  K    VEA  L+       CE+        +  Y+ LI    K+G +  A E
Sbjct: 808 DILVTGYGKQSNKVEAVRLY-------CEMVGKGFLPKVSTYNALISDFSKVGMMSQAKE 860

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           LF  +   G++P   TY+I++ G+       +      DM+ KG +P+  T +++
Sbjct: 861 LFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSI 915



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 69/151 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E+  +L+ M +RG+ P+   Y  L+ G+        A  L+  M   G +  V TYN 
Sbjct: 785 IGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNA 844

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + K   + ++  L++EM ++G+ PT  TY+ L  G  ++       K   +M+   
Sbjct: 845 LISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKG 904

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
            +    T ++      K G   EA  L + L
Sbjct: 905 FSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 136/261 (52%), Gaps = 3/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L+  +   G  P+  +YSTLIDG C     D ARELF      G + +V+ Y +
Sbjct: 208 IDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMA--AGDVQDVIVYTS 265

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G CK   ++E+  ++ +M+  G  P  V+YN + + L + ++V  A +L D+     
Sbjct: 266 FISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERK 325

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                      +DGLCK+  + EA  +  R L        +  YS +IDGLCK  +L+ A
Sbjct: 326 CMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDA 385

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + + Q + R G +P+VVTY  +I  FC  G++D+A +LF  M  +G A + V +N L+ G
Sbjct: 386 YVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRG 445

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R  +  + + ++  M  R 
Sbjct: 446 YCRAAKVDEAIAMIEEMAGRG 466



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 3/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L ++    G   +  VY++ I G C  G++D A+ + V M   GC  + V+YN +
Sbjct: 244 DEARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 301

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSD 120
           I   CK   V E+  L  + + +   P V     L  GL +  +VE A  + + M +  D
Sbjct: 302 IYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGD 361

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A    TY+  IDGLCK   + +A  + + +R   C   +  Y+ +ID  CK+G+L+ A 
Sbjct: 362 RAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAR 421

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELFQ +   G   +VV YNI+I G+C   ++D+A  +  +M  +G+ PN V+ +T++ G 
Sbjct: 422 ELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGL 481

Query: 241 IRNNETSKVVELLHRMD 257
            + +   +   L+ +M+
Sbjct: 482 CKESRVEEARLLMEKMN 498



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++   MI   V+P+AF+Y+ +I   C   ++D A   F  M  +GC+ + VTY  L
Sbjct: 104 DKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVL 163

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   K    E+   ++ EMLSKG  P +VTY T+ +G  +  +++ AL L   ++ +  
Sbjct: 164 VHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 223

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +   S Y+T IDGLCK+    EA ELF           +  Y+  I GLCK GKL+ A  
Sbjct: 224 SPSGSLYSTLIDGLCKHDRHDEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKA 281

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +   G  P+ V+YN++I+  C D ++ +A +L      +   P       L+ G  
Sbjct: 282 VHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 341

Query: 242 RNNETSKVVELLHRMDE 258
           ++    +   +L RM E
Sbjct: 342 KSRRVEEACVILERMLE 358



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 36/295 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+   + M+Q G  P+   Y+ L+       + ++  ++F  M   G    +VTY T
Sbjct: 138 LDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 197

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NGYCK   ++++L+L   +   G  P+   Y+TL  GL +  + + A +LF EM   D
Sbjct: 198 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAAGD 256

Query: 121 V----------------------------------AAETSTYNTFIDGLCKNGYIVEAAE 146
           V                                  A +  +YN  I  LCK+  + EA E
Sbjct: 257 VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 316

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG-LMPNVVTYNIMIHGF 205
           L       KC  G+   + L+DGLCK  ++E A  + + +   G   P+VVTY+ +I G 
Sbjct: 317 LMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGL 376

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C   ++D A+ +   M   G  P+ VT+  ++    +     +  EL  RM ER 
Sbjct: 377 CKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 431



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 120/240 (50%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G + N +  ++L++ F   G    A  +F    +     +  TY TLI G+CK + + ++
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           +NL  EM + GI PT+VT+ +L   L E++  + AL++F +M    V  +   Y   I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK   +  AA  F  +    C      Y+ L+  L K  K E   ++F+ +   G  P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +VTY  +++G+C  G++D+A  L   ++  G +P+   ++TL+ G  +++   +  EL  
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 104/207 (50%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G  HN  T N+L+  +       E+  ++ + L    RP   TY TL  G  +  Q+  A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           + L  EM+ + +     T+ + I  LC+  +  +A ++F  +  +K +     Y+ +I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           LCKI KL+ A   F+ + + G +P+ VTY +++H      + ++ H +F +M +KG +P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
            VT+ T++ G  +     + + L+ R+
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRL 218



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 70/116 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L  M + G  P+   Y+ +ID FC  G +D ARELF  M   GC  +VV YN 
Sbjct: 382 LDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNI 441

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           LI GYC+   V+E++ +  EM  +GI+P VV+ +T+  GL +  +VE A  L ++M
Sbjct: 442 LIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 28/47 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD 47
           +DEA  +++ M  RG++PN    ST++DG C    ++ AR L   M+
Sbjct: 452 VDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMN 498


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 143/310 (46%), Gaps = 51/310 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L + M + G+  + + Y+ ++D FC  G I++AR+ F  M   GC  NVVTY  
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           LI+ Y K K V  +  L+  MLS+G  P +VTY+ L  G  +  QVE A ++F+ M    
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618

Query: 117 ----------QHSDVAAETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
                     Q+ D +   +  TY   +DG CK+  + EA +L   + +  CE     Y 
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGL--------------------------------- 191
            LIDGLCK+GKL+ A E+   +   G                                  
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738

Query: 192 --MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
              PNVV Y  MI G C  G+ D+A+ L   ME KG  PN VT+  ++ G     +    
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798

Query: 250 VELLHRMDER 259
           +ELL RM  +
Sbjct: 799 LELLERMGSK 808



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 115/206 (55%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           RPN   Y  L+DGFC +  ++ AR+L  +M + GC  N + Y+ LI+G CK   ++E+  
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           + +EM   G   T+ TY++L    F++ + + A K+  +M  +  A     Y   IDGLC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G   EA +L + +    C+  +  Y+ +IDG   IGK+ET  EL + +   G+ PN V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDME 222
           TY ++I   C +G +D AH+L  +M+
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMK 841



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 4/254 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D AS++L  M++    PN  +Y+ +IDG C  G+ D A +L   M+  GC  NVVTY  +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+     +E  L L   M SKG+ P  VTY  L     +   ++ A  L +EM+ +  
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T+ Y   I+G   N   +E+  L   +        +  Y  LID L K  +LE A  
Sbjct: 846 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903

Query: 182 LFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L + +      L+    TYN +I   C   +++ A  LF +M  KGV P   +F +L+ G
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963

Query: 240 CIRNNETSKVVELL 253
             RN++ S+ + LL
Sbjct: 964 LFRNSKISEALLLL 977



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 57/308 (18%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L++M+  G  P+  ++++L+  +C +G+   A +L   M   G M   V YN LI   
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 66  CKTKD-----------------------------------------VEESLNLYSEMLSK 84
           C  KD                                          E++ ++  EM+ +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P   TY+ + + L    ++E A  LF+EM+   + A+  TY   +D  CK G I +A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            + F  +R + C   +  Y+ LI    K  K+  A ELF+++   G +PN+VTY+ +I G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597

Query: 205 FCNDGQMDKAHDLF-----------LDMEAK-----GVAPNCVTFNTLMLGCIRNNETSK 248
            C  GQ++KA  +F           +DM  K        PN VT+  L+ G  +++   +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657

Query: 249 VVELLHRM 256
             +LL  M
Sbjct: 658 ARKLLDAM 665



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 19/268 (7%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  ++  MI +G  P+   YS +++  C   +++ A  LF  M   G + +V TY  +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK   +E++   ++EM   G  P VVTY  L H   +  +V +A +LF+ M     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL----RVLKCEL------------GIEAYSC 165
                TY+  IDG CK G + +A ++F  +     V   ++             +  Y  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DG CK  ++E A +L  ++   G  PN + Y+ +I G C  G++D+A ++  +M   G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 226 VAPNCVTFNTLM---LGCIRNNETSKVV 250
                 T+++L+       R +  SKV+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVL 732



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +    M+  GV  N    S+     C  G+ ++A  +   M   G + +  TY+ 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  C    +E +  L+ EM   G+   V TY  +     +   +E A K F+EM+   
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   I    K   +  A ELF T+    C   I  YS LIDG CK G++E A 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608

Query: 181 ELFQSL------PRVGLM----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           ++F+ +      P V +           PNVVTY  ++ GFC   ++++A  L   M  +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G  PN + ++ L+ G  +  +  +  E+   M E
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 93/242 (38%), Gaps = 13/242 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL D       RP+   Y+ LI  F     +D A  +   M +     +  T   
Sbjct: 220 LEELGRLKDFRF----RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
                CK     E+L L     ++   P  V Y  L  GL E    E A+   + M+ + 
Sbjct: 276 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+T + G      +     +   + +  C    + ++ L+   C  G    A+
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ------MDKAHDLFLDMEAKGVAPNCVTFN 234
           +L + + + G MP  V YNI+I   C D        +D A   + +M A GV  N +  +
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452

Query: 235 TL 236
           + 
Sbjct: 453 SF 454



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 3/198 (1%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+  +C+      +L     +     RP+  TYN L     +  +++ A  +  EM  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           +++  +  T   F   LCK G   EA  L  T   +   +    Y+ LI GLC+    E 
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTV---FYTKLISGLCEASLFEE 320

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +    +     +PNVVTY+ ++ G  N  Q+ +   +   M  +G  P+   FN+L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 239 GCIRNNETSKVVELLHRM 256
               + + S   +LL +M
Sbjct: 381 AYCTSGDHSYAYKLLKKM 398



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 4/197 (2%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           TYN LI  + K   ++ +  ++ EM    +R    T     + L ++ +   AL L   +
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---V 293

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +  +   +T  Y   I GLC+     EA +    +R   C   +  YS L+ G     +L
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
                +   +   G  P+   +N ++H +C  G    A+ L   M   G  P  V +N +
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN-I 412

Query: 237 MLGCIRNNETSKVVELL 253
           ++G I  ++ S   +LL
Sbjct: 413 LIGSICGDKDSLNCDLL 429



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNT 60
           E+  LLD + Q    P   VY  LID       ++ A  L   V+      +    TYN+
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   C    VE +  L+SEM  KG+ P + ++ +L  GLF   ++  AL L D + H +
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHME 984

Query: 121 V 121
           +
Sbjct: 985 I 985


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 127/249 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+++G + +   ++TL++G C  G +  A  L   M  NG   N VTY T++NG CK  D
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            + +LNL  +M    I+  VV Y  +   L +      A  LF EM    +     TYN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG C  G   +A +L R +     +  +  ++ LI+   K GK+  A EL++ +    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P+ +TYN +I GFC   ++D A  +F  M +KG +PN +T NTL+ GC R       +
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 251 ELLHRMDER 259
           +LLH M  R
Sbjct: 241 KLLHEMLRR 249



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 131/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+D M++ G +PN   Y T+++G C  G+ D A  L   MD +    +VV Y  +I
Sbjct: 28  EAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKADVVIYTAII 87

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK     ++ NL++EM  KGI P V+TYN +  G     +   A +L  +M  S+V 
Sbjct: 88  DRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVD 147

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T+N  I+   K G I EA EL+R +           Y+ LIDG CK  +L+ A  +
Sbjct: 148 PDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHI 207

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G  PNV+T N +I G C   ++D    L  +M  +G+ P+ V++NTL+ G  +
Sbjct: 208 FDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQ 267

Query: 243 NNETSKVVELLHRM 256
             + +   +L   M
Sbjct: 268 AGDLNAAQDLFQEM 281



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 117/220 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  LL  M +  ++ +  +Y+ +ID  C  G   +A+ LF  M   G   NV+TYN +
Sbjct: 62  DSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCM 121

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C      ++  L  +M+   + P VVT+N L +   +  ++  A +L+ EM   ++
Sbjct: 122 IDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNI 181

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +T TYN+ IDG CK+  + +A  +F  +        +   + LI G C+  +++   +
Sbjct: 182 FPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIK 241

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           L   + R GL+P+ V+YN +IHGFC  G ++ A DLF +M
Sbjct: 242 LLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 89/180 (49%)

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M+ KG +  VV +NTL +GL    +V  A  L D M  +       TY T ++G+CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
              A  L R +     +  +  Y+ +ID LCK G    A  LF  +   G+ PNV+TYN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           MI G C+ G+   A  L  DM    V P+ VTFN L+   ++  + S+  EL   M  RN
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 66/116 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   M+ R + P+   Y++LIDGFC    +D A+ +F  M   G   NV+T NT
Sbjct: 166 ISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINT 225

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           LI G C+ K V++ + L  EML +G+ P  V+YNTL HG  +   +  A  LF EM
Sbjct: 226 LIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 50/84 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + DLM+ +G  PN    +TLI G C    +D   +L   M   G + + V+YNT
Sbjct: 201 LDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNT 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSK 84
           LI+G+C+  D+  + +L+ EM+S+
Sbjct: 261 LIHGFCQAGDLNAAQDLFQEMISQ 284


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 143/310 (46%), Gaps = 51/310 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L + M + G+  + + Y+ ++D FC  G I++AR+ F  M   GC  NVVTY  
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           LI+ Y K K V  +  L+  MLS+G  P +VTY+ L  G  +  QVE A ++F+ M    
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618

Query: 117 ----------QHSDVAAETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
                     Q+ D +   +  TY   +DG CK+  + EA +L   + +  CE     Y 
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGL--------------------------------- 191
            LIDGLCK+GKL+ A E+   +   G                                  
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738

Query: 192 --MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
              PNVV Y  MI G C  G+ D+A+ L   ME KG  PN VT+  ++ G     +    
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798

Query: 250 VELLHRMDER 259
           +ELL RM  +
Sbjct: 799 LELLERMGSK 808



 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 115/206 (55%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           RPN   Y  L+DGFC +  ++ AR+L  +M + GC  N + Y+ LI+G CK   ++E+  
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           + +EM   G   T+ TY++L    F++ + + A K+  +M  +  A     Y   IDGLC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           K G   EA +L + +    C+  +  Y+ +IDG   IGK+ET  EL + +   G+ PN V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDME 222
           TY ++I   C +G +D AH+L  +M+
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMK 841



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 4/254 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D AS++L  M++    PN  +Y+ +IDG C  G+ D A +L   M+  GC  NVVTY  +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+     +E  L L   M SKG+ P  VTY  L     +   ++ A  L +EM+ +  
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
              T+ Y   I+G   N   +E+  L   +        +  Y  LID L K  +LE A  
Sbjct: 846 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903

Query: 182 LFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           L + +      L+    TYN +I   C   +++ A  LF +M  KGV P   +F +L+ G
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963

Query: 240 CIRNNETSKVVELL 253
             RN++ S+ + LL
Sbjct: 964 LFRNSKISEALLLL 977



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 57/308 (18%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           R+L++M+  G  P+  ++++L+  +C +G+   A +L   M   G M   V YN LI   
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 66  CKTKD-----------------------------------------VEESLNLYSEMLSK 84
           C  KD                                          E++ ++  EM+ +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G  P   TY+ + + L    ++E A  LF+EM+   + A+  TY   +D  CK G I +A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            + F  +R + C   +  Y+ LI    K  K+  A ELF+++   G +PN+VTY+ +I G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597

Query: 205 FCNDGQMDKAHDLF-----------LDMEAK-----GVAPNCVTFNTLMLGCIRNNETSK 248
            C  GQ++KA  +F           +DM  K        PN VT+  L+ G  +++   +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657

Query: 249 VVELLHRM 256
             +LL  M
Sbjct: 658 ARKLLDAM 665



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 19/268 (7%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  ++  MI +G  P+   YS +++  C   +++ A  LF  M   G + +V TY  +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK   +E++   ++EM   G  P VVTY  L H   +  +V +A +LF+ M     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL----RVLKCEL------------GIEAYSC 165
                TY+  IDG CK G + +A ++F  +     V   ++             +  Y  
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+DG CK  ++E A +L  ++   G  PN + Y+ +I G C  G++D+A ++  +M   G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 226 VAPNCVTFNTLM---LGCIRNNETSKVV 250
                 T+++L+       R +  SKV+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVL 732



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 16/274 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +    M+  GV  N    S+     C  G+ ++A  +   M   G + +  TY+ 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++N  C    +E +  L+ EM   G+   V TY  +     +   +E A K F+EM+   
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   I    K   +  A ELF T+    C   I  YS LIDG CK G++E A 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608

Query: 181 ELFQSL------PRVGLM----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           ++F+ +      P V +           PNVVTY  ++ GFC   ++++A  L   M  +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G  PN + ++ L+ G  +  +  +  E+   M E
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 93/242 (38%), Gaps = 13/242 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL D       RP+   Y+ LI  F     +D A  +   M +     +  T   
Sbjct: 220 LEELGRLKDFRF----RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
                CK     E+L L     ++   P  V Y  L  GL E    E A+   + M+ + 
Sbjct: 276 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+T + G      +     +   + +  C    + ++ L+   C  G    A+
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ------MDKAHDLFLDMEAKGVAPNCVTFN 234
           +L + + + G MP  V YNI+I   C D        +D A   + +M A GV  N +  +
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452

Query: 235 TL 236
           + 
Sbjct: 453 SF 454



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 3/198 (1%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+  +C+      +L     +     RP+  TYN L     +  +++ A  +  EM  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           +++  +  T   F   LCK G   EA  L  T   +   +    Y+ LI GLC+    E 
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTV---FYTKLISGLCEASLFEE 320

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +    +     +PNVVTY+ ++ G  N  Q+ +   +   M  +G  P+   FN+L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 239 GCIRNNETSKVVELLHRM 256
               + + S   +LL +M
Sbjct: 381 AYCTSGDHSYAYKLLKKM 398



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 4/197 (2%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           TYN LI  + K   ++ +  ++ EM    +R    T     + L ++ +   AL L   +
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---V 293

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +  +   +T  Y   I GLC+     EA +    +R   C   +  YS L+ G     +L
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
                +   +   G  P+   +N ++H +C  G    A+ L   M   G  P  V +N +
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN-I 412

Query: 237 MLGCIRNNETSKVVELL 253
           ++G I  ++ S   +LL
Sbjct: 413 LIGSICGDKDSLNCDLL 429



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 72/189 (38%), Gaps = 39/189 (20%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+ M  +GV PN   Y  LID  C  G +D A  L   M       +   Y  +I G+ 
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF- 859

Query: 67  KTKDVEESLNLYSEMLSKGIRP---------------------------------TVV-- 91
             K+  ESL L  E+      P                                 T+V  
Sbjct: 860 -NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918

Query: 92  --TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
             TYN+L   L   ++VE A +LF EM    V  E  ++ + I GL +N  I EA  L  
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978

Query: 150 TLRVLKCEL 158
            +  + C L
Sbjct: 979 FISHMVCPL 987



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNT 60
           E+  LLD + Q    P   VY  LID       ++ A  L   V+      +    TYN+
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           LI   C    VE +  L+SEM  KG+ P + ++ +L  GLF   ++  AL L D + H
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 130/253 (51%), Gaps = 4/253 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           ASR+L L I+  V     +Y+ LI GF   G ID+A  +   M  NGC   VVTYN L+N
Sbjct: 353 ASRMLSLNIELSVS----IYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLN 408

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            YC    +E++ NL ++M + G+ P   +YN L  GL + HQ++ A     +        
Sbjct: 409 HYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFC 468

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  + N  ID  CK   +  A ELF+ +     +     Y  LI+GL  +G    A ELF
Sbjct: 469 DIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELF 528

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + +  + PNV  YNIM+H  C  G + +A  +FL M  K + P+ VT+NTL+    +N
Sbjct: 529 EQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKN 588

Query: 244 NETSKVVELLHRM 256
           +   + ++L   M
Sbjct: 589 SRAMEALDLFKDM 601



 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 138/258 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  ++  M   G  P    Y+ L++ +C  G +++A  L   M+ +G   +  +YN 
Sbjct: 381 IDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQ 440

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G CKT  ++++    S+ +  G    +V+ N L     ++ +V+ AL+LF EM +  
Sbjct: 441 LLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKG 500

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TY T I+GL   GY   A ELF  +   + +  +  Y+ ++  LCK+G L+ A 
Sbjct: 501 MQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQ 560

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  + +  ++P++VTYN +I+    + +  +A DLF DM  KGV P+ +TF  L+ G 
Sbjct: 561 KIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGL 620

Query: 241 IRNNETSKVVELLHRMDE 258
           +    ++   E+   M E
Sbjct: 621 LDEGRSTLAYEVWEYMME 638



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 119/248 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D   +   + + +G+    F YS  I   C +  I+   EL   MD  G   ++   N  
Sbjct: 207 DLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIY 266

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  CK   + ++L +  +M  KG  P VVTY T+   L    +   A+ L++EM    +
Sbjct: 267 IDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGL 326

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +       I GLCKN  + EA EL   +  L  EL +  Y+ LI G  + G ++ A+ 
Sbjct: 327 KPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYT 386

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +   G  P VVTYNI+++ +C  G M+KA +L   ME  GV P+  ++N L+ G  
Sbjct: 387 IISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLC 446

Query: 242 RNNETSKV 249
           + ++  K 
Sbjct: 447 KTHQLDKA 454



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 118/253 (46%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M + G  P+ +  +  ID  C    +  A ++   M   G + +VVTY T++   C
Sbjct: 247 LLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLC 306

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             K   E++ L+ EM+  G++P VV    L  GL +  +VE A +L   M   ++    S
Sbjct: 307 NNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVS 366

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YN  I G  + G I +A  +   +R   CE G+  Y+ L++  C IG +E A  L   +
Sbjct: 367 IYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKM 426

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ P+  +YN ++ G C   Q+DKA     D    G   + V+ N L+    +  + 
Sbjct: 427 ETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKV 486

Query: 247 SKVVELLHRMDER 259
              +EL   MD +
Sbjct: 487 KSALELFKEMDYK 499



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 130/230 (56%), Gaps = 8/230 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS--MDINGCMHNVVTY 58
           M++A  L+  M   GV P+ + Y+ L+ G C T ++D+A   FVS  M++ G   ++V+ 
Sbjct: 416 MEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFA-FVSDHMEVGG-FCDIVSC 473

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI+ +CK K V+ +L L+ EM  KG++   VTY TL +GLF +     A +LF++M  
Sbjct: 474 NILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLK 533

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL--GIEAYSCLIDGLCKIGKL 176
           + +    + YN  +  LCK G +  A ++F  L +++ E+   I  Y+ LI  L K  + 
Sbjct: 534 AQIDPNVNLYNIMLHHLCKVGDLKRAQKIF--LHMIQKEILPDIVTYNTLIYWLGKNSRA 591

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
             A +LF+ +   G+ P+ +T+  +I+G  ++G+   A++++  M   G+
Sbjct: 592 MEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGI 641



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 85/167 (50%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           LID FC   ++  A ELF  MD  G   + VTY TLING         +  L+ +ML   
Sbjct: 476 LIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQ 535

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I P V  YN + H L ++  ++ A K+F  M   ++  +  TYNT I  L KN   +EA 
Sbjct: 536 IDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEAL 595

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           +LF+ +R    E     +  LI+GL   G+   A+E+++ +   G++
Sbjct: 596 DLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGII 642



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 35/268 (13%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           S  L  +  +GV  +  +Y  L+ G+   G+ D     F  M ++GC    + YN  I  
Sbjct: 140 SEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGV 199

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
             K    +     Y   LSKG+  T  TY+     L + +++E   +L  +M     + +
Sbjct: 200 LIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPD 259

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLR-------------VLKC--------------- 156
               N +ID LCK   + +A ++   +R             V+ C               
Sbjct: 260 IWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWE 319

Query: 157 ---ELGIE----AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
              ++G++    A   LI GLCK  K+E A+EL   +  + +  +V  YN +I GF   G
Sbjct: 320 EMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAG 379

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +DKA+ +   M   G  P  VT+N L+
Sbjct: 380 SIDKAYTIISFMRTNGCEPGVVTYNILL 407



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 102/242 (42%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + F  + ++    + G      E   ++   G   +   Y  L++GY +    +  
Sbjct: 115 GFDHSQFAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSV 174

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           +  + EM+  G R   + YN     L +    +   K +       +     TY+ +I  
Sbjct: 175 IGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISA 234

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC++  I    EL   +        I A +  ID LCK  +L  A ++ + +   G +P+
Sbjct: 235 LCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPD 294

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTY  ++   CN+ +  +A  L+ +M   G+ P+ V    L+ G  +N++  +  EL  
Sbjct: 295 VVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELAS 354

Query: 255 RM 256
           RM
Sbjct: 355 RM 356


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 143/276 (51%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M + GV P+ + Y+ LID FC  G I++A+  F  M   GC  NVVTY  
Sbjct: 468 VDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTA 527

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           L++ Y K+K + ++ +++  M+     P  +TY+ L  GL +  +++ A +++ ++    
Sbjct: 528 LLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTS 587

Query: 117 -----------QHSD-VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
                      + +D ++    TY   ++GLCK   + +A +L   +    CE     Y 
Sbjct: 588 DNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYD 647

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            L+DG CK+G++++A E+F  + + G +P+V TY  +I     DG++D A  +   M   
Sbjct: 648 ALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 707

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              PN VT+  ++ G  +  ET K + LL  M+++ 
Sbjct: 708 SCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKG 743



 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 16/254 (6%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---------------- 46
           +A+ +   M+     PNA  YS LIDG C  GEI +A E++  +                
Sbjct: 540 QANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGK 599

Query: 47  DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           D +    NVVTY  L+NG CK + V ++ +L   ML+ G  P  + Y+ L  G  ++ ++
Sbjct: 600 DTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEI 659

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           + A ++F  M          TY + ID + K+G +  A ++   +    C   +  Y+ +
Sbjct: 660 DSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +DGLCK G+ E A  L   + + G  PNVVTY  +I G    G++D   +LF+ M+ KG 
Sbjct: 720 VDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGC 779

Query: 227 APNCVTFNTLMLGC 240
           APN VT+  L+  C
Sbjct: 780 APNYVTYRILINHC 793



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 20/273 (7%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A +++  M+++G  P+A  Y+ +I   C    +D+A  LF  M   G   +V TY  L
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTIL 493

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   +E++ + + EM S G  P VVTY  L H   +  Q+  A  +F  M     
Sbjct: 494 IDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDAC 553

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA------------------Y 163
                TY+  IDGLCK G I +A E++  L  +     IE+                  Y
Sbjct: 554 YPNAITYSALIDGLCKAGEIQKACEVYAKL--IGTSDNIESDFYFEGKDTDTISPNVVTY 611

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
             L++GLCK  K+  A +L  ++   G  PN + Y+ ++ GFC  G++D A ++FL M  
Sbjct: 612 GALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTK 671

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G  P+  T+ +L+    ++      +++L +M
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 704



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 142/325 (43%), Gaps = 71/325 (21%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING---------- 50
           + +A  LLD M+  G  PN  VY  L+DGFC  GEID A+E+F+ M   G          
Sbjct: 624 VSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTS 683

Query: 51  -------------------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                    C  NVVTY  +++G CKT + E++LNL S M  KG
Sbjct: 684 LIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKG 743

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG------ 139
             P VVTY  L  GL +  +V+  L+LF +M+    A    TY   I+  C  G      
Sbjct: 744 CSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAH 803

Query: 140 ---------YIVEAAELFRTL-----RVLKCELGI-------------EAYSCLIDGLCK 172
                    +  +  + +RT      +     LG+               Y  LID   K
Sbjct: 804 LLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSK 863

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNI---MIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            G+LETA EL + +  V    N+ + ++   +I   C   Q+++A  L+ +M  +G+ P+
Sbjct: 864 AGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPD 923

Query: 230 CVTFNTLMLGCIRNNETSKVVELLH 254
              F  L+ G I  N+ ++ ++L +
Sbjct: 924 LSAFVCLVKGLIERNKWNEALQLCY 948



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 99/194 (51%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           + PN   Y  L++G C   ++  A +L  +M   GC  N + Y+ L++G+CK  +++ + 
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            ++  M   G  P+V TY +L   +F+  +++ A+K+  +M          TY   +DGL
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGL 723

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK G   +A  L   +    C   +  Y+ LIDGL K GK++   ELF  +   G  PN 
Sbjct: 724 CKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNY 783

Query: 196 VTYNIMIHGFCNDG 209
           VTY I+I+  C  G
Sbjct: 784 VTYRILINHCCAAG 797



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 120/310 (38%), Gaps = 57/310 (18%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEI------DRARELFVSMDINGCMHNVVT 57
           A +L + M   G  P   VY+  I   C   E+      D A +++  M +  C+ N + 
Sbjct: 360 AYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKIN 419

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
                   C     E++  +  EM+ KG  P   TY  +   L +  +V+ A  LF EM+
Sbjct: 420 TANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMK 479

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE---------------- 161
              V  +  TY   ID  CK G I +A   F  +R   C   +                 
Sbjct: 480 KVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLY 539

Query: 162 -------------------AYSCLIDGLCKIGKLETAWELFQSLPRVG------------ 190
                               YS LIDGLCK G+++ A E++  L                
Sbjct: 540 QANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGK 599

Query: 191 ----LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
               + PNVVTY  +++G C   ++  AHDL   M A G  PN + ++ L+ G  +  E 
Sbjct: 600 DTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEI 659

Query: 247 SKVVELLHRM 256
               E+  RM
Sbjct: 660 DSAQEVFLRM 669



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA   L  M      PN   Y TL+ GF    ++   + +   M   GC  +   +N+L
Sbjct: 288 NEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSL 347

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH------ALKLFDE 115
           ++ YC  +D   +  L++ M + G  P  V YN     +    ++ +      A K+++E
Sbjct: 348 VHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEE 407

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M  +           F   LC  G   +A ++ + +           Y+ +I  LC+  +
Sbjct: 408 MLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKR 467

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           ++ A+ LFQ + +VG+ P+V TY I+I  FC  G +++A   F +M + G +PN VT+  
Sbjct: 468 VDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTA 527

Query: 236 LMLGCIRNNETSKVVELLHRM 256
           L+   +++ +  +  ++ HRM
Sbjct: 528 LLHAYLKSKQLYQANDIFHRM 548



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 96/244 (39%), Gaps = 43/244 (17%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  LL LM ++G  PN   Y+ LIDG    G++D   ELF+ M   GC  N VTY  L
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789

Query: 62  INGYCK---------------------------------TKDVEESLNLYSEMLSKGIRP 88
           IN  C                                  +K    SL L  EM S    P
Sbjct: 790 INHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAP 849

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA---AETSTYNTFIDGLCKNGYIVEAA 145
               Y  L     +  ++E AL+L  EM     +   A    + + I  LC +  + EA 
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAV 909

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L+  +R       + A+ CL+ GL +  K   A +L   + + G+       N   + F
Sbjct: 910 ALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV-------NWEGNKF 962

Query: 206 CNDG 209
           C+ G
Sbjct: 963 CDGG 966



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 7/201 (3%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+   C      E+L     +   G RP+ VTYN L   L    QVE A ++  EM  
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKL 176
           S    + ST  +F   LCK G   +A +L       + +  ++   C  +I GL +    
Sbjct: 233 SGFCMDRSTVGSFAQALCKEGRWGDALDLLE-----REDFKLDTVLCTQMISGLMEASLF 287

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A      +     +PNVVTY  ++ GF    Q+     +   M  +G  P+   FN+L
Sbjct: 288 NEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSL 347

Query: 237 MLGCIRNNETSKVVELLHRMD 257
           +       + +   +L +RM+
Sbjct: 348 VHTYCNAEDYAYAYKLFNRMN 368



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 85/230 (36%), Gaps = 4/230 (1%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           + L+   CL G    A E    +   G   + VTYN L+        VE +  +  EM +
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            G      T  +    L +  +   AL L   ++  D   +T      I GL +     E
Sbjct: 233 SGFCMDRSTVGSFAQALCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLMEASLFNE 289

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A      +R       +  Y  L+ G  K  +L     +   +   G  P+   +N ++H
Sbjct: 290 AMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVH 349

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            +CN      A+ LF  M   G  P  V +N + +G I   E     ELL
Sbjct: 350 TYCNAEDYAYAYKLFNRMNTCGCPPGYVVYN-IFIGSICGREELPNPELL 398


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 36/280 (12%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q+G  P+   Y+ LIDGFC  GEI++ +ELF  M+  G   NVVT NTL+ G C+T  V 
Sbjct: 412 QKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVS 471

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            ++N + E   +G++   VTY  L +    ++  E A++LF+EM  S  + +   Y T I
Sbjct: 472 SAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLI 531

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
            G  + G + +A+ +   L+ L        Y+ LI G C+  K    +E+ + +   GL 
Sbjct: 532 SGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK 591

Query: 193 PNVVTYNIM-----------------------------------IHGFCNDGQMDKAHDL 217
           P+ +TYN +                                   I+ +C +G  ++A ++
Sbjct: 592 PDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEI 651

Query: 218 FLDMEAKG-VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           F DM+A   V PN V +N L+    +NN+    V L+  M
Sbjct: 652 FKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDM 691



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 9/261 (3%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN--------GCMHNVVTY 58
           L++ M++  ++PN   +  LI+  C    +D A E+   M               +VV Y
Sbjct: 327 LMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIY 386

Query: 59  NTLINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           NTLI+G CK    +E L L   M S KG  P  +TYN L  G  +  ++E   +LFDEM 
Sbjct: 387 NTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMN 446

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              VA    T NT + G+C+ G +  A   F   +    +     Y+ LI+  C +   E
Sbjct: 447 KEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFE 506

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A ELF  + + G  P+ + Y  +I GF   G+M  A  +  +++  G+ P+ V +NTL+
Sbjct: 507 KAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 566

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G  R N+  +V E+L  M+E
Sbjct: 567 GGFCRTNKFHRVFEMLKEMEE 587



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 128/294 (43%), Gaps = 36/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++   L D M + GV PN    +TL+ G C TG +  A   FV     G   + VTY  
Sbjct: 435 IEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG----------------------------------- 85
           LIN +C   + E+++ L++EML  G                                   
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           IRP  V YNTL  G    ++     ++  EM+ + +  +T TYNT I    KNG +  A 
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQ 614

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG-LMPNVVTYNIMIHG 204
           ++ R +        +  Y  +I+  C  G    A E+F+ +     + PN V YNI+I+ 
Sbjct: 615 KVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINS 674

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            C + ++  A  L  DM+  GV PN  T+N +  G     +  KV E + RM E
Sbjct: 675 LCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 9/264 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DE   L+    + GV  ++F    LI   C   + +R  +LF  M   G +      N+L
Sbjct: 252 DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSL 311

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-- 119
           + G  +  +      L  +M+   I+P VVT+  L + + +  +V+ AL++ ++M     
Sbjct: 312 LTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371

Query: 120 ------DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCK 172
                  V  +   YNT IDGLCK G   E   L   +R  K C      Y+CLIDG CK
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            G++E   ELF  + + G+ PNVVT N ++ G C  G++  A + F++ + +G+  + VT
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491

Query: 233 FNTLMLGCIRNNETSKVVELLHRM 256
           +  L+      N   K +EL + M
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEM 515



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 1/236 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L + M++ G  P+A VY TLI GF   G +  A  +   +   G   + V YNTL
Sbjct: 506 EKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTL 565

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+C+T        +  EM   G++P  +TYNTL     +   ++ A K+  +M  + V
Sbjct: 566 IGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGV 625

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-KCELGIEAYSCLIDGLCKIGKLETAW 180
               +TY   I+  C NG   EA E+F+ ++   K       Y+ LI+ LCK  K+++A 
Sbjct: 626 VPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAV 685

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            L + +   G+ PN  TYN +  G  ++  ++K  +    M      P+ +T   L
Sbjct: 686 SLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEIL 741



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 1/214 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +AS +L  + + G+RP+   Y+TLI GFC T +  R  E+   M+  G   + +TYNT
Sbjct: 540 MADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNT 599

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH-S 119
           LI    K  D++ +  +  +M+  G+ PTV TY  + +          A+++F +M+  S
Sbjct: 600 LIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAAS 659

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V   T  YN  I+ LCKN  +  A  L   +++         Y+ +  GL     LE  
Sbjct: 660 KVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKV 719

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           +E    +      P+ +T  I+       G++++
Sbjct: 720 FEFMDRMIEHACNPDYITMEILTEWLSAVGEIER 753



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 48/119 (40%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D+     V PN  +Y+ LI+  C   ++  A  L   M I G   N  TYN +  G    
Sbjct: 654 DMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDE 713

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           KD+E+       M+     P  +T   L   L  + ++E   K     + S   A+ ++
Sbjct: 714 KDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVSSSTAQKAS 772


>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 257

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 127/243 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M Q  ++ +  + + ++D  C  G    A+ LF  M   G   NV+TYN +I+ +C +  
Sbjct: 1   MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             ++  L   M+ K I P +VT++ L +   +  +V  A +++ EM    +   T TYN+
Sbjct: 61  WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CK   + +A  +  ++    C   +  +S LI+G CK  +++   E+F  + R G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++ N VTY  +IHGFC  G +D A DL  +M + GVAP+ +TF+ ++ G     E  K  
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240

Query: 251 ELL 253
            +L
Sbjct: 241 AIL 243



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 113/219 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L   M ++G+ PN   Y+ +ID FC +G    A +L   M       ++VT++ LIN
Sbjct: 29  AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            + K + V E+  +Y EML   I PT +TYN++  G  +  +V+ A ++ D M     + 
Sbjct: 89  AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T++T I+G CK   +    E+F  +           Y+ LI G C++G L+ A +L 
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
             +   G+ P+ +T++ M+ G C+  ++ KA  +  D++
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 102/188 (54%), Gaps = 4/188 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL  MI++ + P+   +S LI+ F    ++  A E++  M         +TYN++I
Sbjct: 63  DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK   V+++  +   M SKG  P VVT++TL +G  +  +V++ +++F EM    + 
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAW 180
           A T TY T I G C+ G +  A +L   +  + C +  +   + C++ GLC   +L  A+
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEM--ISCGVAPDYITFHCMLAGLCSKKELRKAF 240

Query: 181 ELFQSLPR 188
            + + L +
Sbjct: 241 AILEDLQK 248



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 73/120 (60%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A R+LD M  +G  P+   +STLI+G+C    +D   E+F  M   G + N VTY T
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C+  D++ + +L +EM+S G+ P  +T++ +  GL    ++  A  + +++Q S+
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 75/152 (49%)

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
           +A  LF EM    +     TYN  ID  C +G   +A +L R +   +    I  +S LI
Sbjct: 28  NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI 87

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           +   K  K+  A E+++ + R  + P  +TYN MI GFC   ++D A  +   M +KG +
Sbjct: 88  NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           P+ VTF+TL+ G  +       +E+   M  R
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 34/70 (48%)

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           +  +VV    ++   C DG    A +LF +M  KG+ PN +T+N ++     +   S   
Sbjct: 6   IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65

Query: 251 ELLHRMDERN 260
           +LL  M E+ 
Sbjct: 66  QLLRHMIEKQ 75


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 144/296 (48%), Gaps = 38/296 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +     ++R V P+ + ++T+I G C  G++ +A ++   +   G   +V TYN+
Sbjct: 172 VDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNS 231

Query: 61  LINGYCKTKDVEESLN---LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           LI+GYCK        +   L  EM+  GI PT VT+  L +G  +      A+++F+EM+
Sbjct: 232 LIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMK 291

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-------------VLK--CELGIEA 162
              +AA   TYN+ I GLC  G + E  +L   +              VLK  C+ G+ A
Sbjct: 292 QQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA 351

Query: 163 --------------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
                               Y+ LIDG  ++GK+E A  + +++ + G+ PNV TYN +I
Sbjct: 352 DANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            GF   G    A  L  +M+ KG+  + VT+N L+       E  K V+LL  M E
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 124/249 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L++ M   G+ PN   +  ++ GFC  G +  A +    M       +VV Y  
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTI 374

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY +   +E+++ +   M  KGI P V TYN L  G         A  L DEM+   
Sbjct: 375 LIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TYN  I  LC  G + +A +L   +  +  E     Y+ +I G C  G +++A+
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + +     NVVTYN+ I  FC  G+MD+A+DL  +M  K + PN +T+ T+  G 
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554

Query: 241 IRNNETSKV 249
           +    T  +
Sbjct: 555 MEKGYTPDI 563



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 118/252 (46%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M++ G+ P A  +  LI+G+C       A  +F  M   G   +VVTYN+LI+G C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               VEE + L  EM   G+ P  +T+  +  G  +   +  A    D M   +V  +  
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y   IDG  + G + +A  +   +        +  Y+CLI G  + G   +A  L   +
Sbjct: 371 IYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+  +VVTYN++I   C  G++ KA  L  +M   G+ PN +T+NT++ G       
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNI 490

Query: 247 SKVVELLHRMDE 258
               E+  RM++
Sbjct: 491 KSAYEIRTRMEK 502



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 9/210 (4%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           + N L+ G    K V+ +   +   L + + P + T+NT+  GL  I Q+  A  +  ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK--CELGIEA----YSCLIDGL 170
           +   +A   +TYN+ IDG CK G    A  ++    +LK   E GI      +  LI+G 
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK      A  +F+ + + G+  +VVTYN +I G C++G++++   L  +ME  G++PN 
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +TF  ++ G  +    +   + +  M ERN
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERN 364



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 3/175 (1%)

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           RP+  + N L  GL    +V+ A K F       V+ +  T+NT I GLC+ G + +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE---LFQSLPRVGLMPNVVTYNIMIH 203
           + + ++       +  Y+ LIDG CK G     +    L + +   G+ P  VT+ ++I+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G+C +     A  +F +M+ +G+A + VT+N+L+ G     +  + V+L+  M++
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 8/169 (4%)

Query: 100 LFEIHQVEHALKLFDEM-----QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           +  + +    L+ +D        H      TS+ N  + GL     +  A + FR+    
Sbjct: 126 VLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR 185

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           +    I  ++ +I GLC+IG+L  A ++ + +   GL P+V TYN +I G+C  G     
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245

Query: 215 H--DLFL-DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +  D+ L +M   G++P  VTF  L+ G  +N+ T+  V +   M ++ 
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 130/245 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +  G  PN  VY+ LIDG+C  GE++ A ++F  MD N C  NV TY  LI+G CK+  V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E ++ L+S M+  G+ P VVTY  L  G      ++ A +L   M+ + +     T++  
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           ID LCK   + EA     +L     ++    Y+ LIDGLCK GK++ A EL Q +   G 
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +P+  +Y+ +I G C   ++ +A  +  DM  KG+  + VT+  ++   +R   +    +
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 252 LLHRM 256
           +  +M
Sbjct: 444 IFDKM 448



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 119/234 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A + L  ++  G+ P+++ Y++ + G+C  G +  A  +FV M + GC+    TY  L++
Sbjct: 91  AKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLH 150

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G      V E++ ++  M +    P    Y T+ HGL E  + E A  L +E   +    
Sbjct: 151 GLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEP 210

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YN  IDG C  G +  A ++F  +   +C   +  Y+ LI GLCK GK+E A  LF
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   GL PNVVTY  +I G CN+G +  A  L   ME  G+ PN  TF+ L+
Sbjct: 271 SRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A R+  LM  RG    AF Y+ L+ G    G +  A  +FV M  + C  +   Y T
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G C+    EE+  L  E +S G  P +V YN L  G     ++EHALK+F+ M  + 
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   I GLCK+G +  A  LF  +     E  +  Y+ LI G C  G L+ A+
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL+PN  T++++I   C   ++++A      +  KGV  N V + +L+ G 
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 241 IRNNETSKVVELLHRM 256
            +  +     EL+ +M
Sbjct: 363 CKTGKIDAADELMQKM 378



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 118/243 (48%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+  VY+T++ G C  G  + A  L      NG   N+V YN LI+GYC   ++E +L +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +  M      P V TY  L HGL +  +VE A+ LF  M  + +     TY   I G C 
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G++  A  L   +           +S LID LCK  K+E A     SL + G+  N V 
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  +I G C  G++D A +L   M ++G  P+  ++++L+ G  R  + S+   +L  M 
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 258 ERN 260
           E+ 
Sbjct: 415 EKG 417



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 115/239 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   Y+TLI+ +CL G+I  A++   S+   G   +   Y + + GYC+   +  +  ++
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M  +G   T  TY  L HGL     V  A+ +F  M+    A +T  Y T + GLC+ 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G   EA  L         E  I  Y+ LIDG C  G++E A ++F+ +      PNV TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
             +IHG C  G++++A  LF  M   G+ PN VT+  L+ G            LLH M+
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 124/257 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RLL LM   G+ PN + +S LID  C   +++ A+    S+   G   N V Y +LI+
Sbjct: 301 AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CKT  ++ +  L  +M+S+G  P   +Y++L  GL    ++  A  + ++M    + A
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   ID L +        ++F  +        I  Y+  +   C+ G++E A  + 
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+ PN+VTYN +I G+ N G + +A   F  M  KG  PN  ++  L+   ++ 
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540

Query: 244 NETSKVVELLHRMDERN 260
           + +   V++    D ++
Sbjct: 541 SSSDNSVDIWKIADMKD 557



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 5/255 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L+  MI  G  P+A  YS+LIDG C   ++ +A  +   M   G   + VTY  
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+   +    E    ++ +M++ GI P +VTY        E  ++E A  +  +M    
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYNT I G    G + +A   F  +     +   ++Y+ L+  + K    + + 
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547

Query: 181 ELFQSLPRVGLMP---NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++++      L     + + + I+I+G    G + +   L   M+  G  P+  T N ++
Sbjct: 548 DIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSN-TINAMI 606

Query: 238 LGCIR-NNETSKVVE 251
            G I   NE  ++  
Sbjct: 607 TGEITVTNEVQEIAR 621


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 140/264 (53%), Gaps = 9/264 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  LL+ M ++G + +   Y+TLI G C   EIDRA EL   M  N  + ++ TY+ 
Sbjct: 273 MGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDI 332

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--- 116
           LI G C+ K + E+ +L   + ++    P VV+YNTL  G  +  +V  A +LF EM   
Sbjct: 333 LIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTA 392

Query: 117 -QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
            QH DV     TY+T I GLC  G   EA      +   K    +  YS +I GLC+ G+
Sbjct: 393 GQHPDVV----TYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGE 448

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           L+ A  +F S+   G  PN+  YN +I+G C  G++  A     +M  +G +P+ VT+ T
Sbjct: 449 LDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGT 508

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           L++G  R + T +  +L  R  E+
Sbjct: 509 LIVGLCRWSRTDEACDLYVRSLEQ 532



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA    + M    + PN + Y+ +I+G    G++  A  +   M +      +  Y +
Sbjct: 208 VDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTLANYTS 262

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G+CK  D+ ++ +L  +M  KG +   +TYNTL HG   + +++ A +L +EM+ +D
Sbjct: 263 VIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSND 322

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-KCELGIEAYSCLIDGLCKIGKLETA 179
              +  TY+  I GLC+   + EA +L  TLR    C   + +Y+ LIDG  K  ++  A
Sbjct: 323 FVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDA 382

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++LF  +   G  P+VVTY+ +I G CN G+  +AH    +M  K + P    +++++ G
Sbjct: 383 YQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISG 442

Query: 240 CIRNNE 245
             R  E
Sbjct: 443 LCRAGE 448



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 1/227 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYN 59
           +D A  LL+ M      P+ F Y  LI G C    +  AR+L  ++ + + C  NVV+YN
Sbjct: 308 IDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYN 367

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TLI+G+ K   V ++  L+ EM++ G  P VVTY+TL  GL    +   A    +EM   
Sbjct: 368 TLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGK 427

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +   Y++ I GLC+ G +  A+ +F ++    C+  +  Y+ LI GLCK G+L  A
Sbjct: 428 KILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDA 487

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
               + +   G  P+ VTY  +I G C   + D+A DL++    +G+
Sbjct: 488 KLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 8/252 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA RL      + + P++  Y  LI G C  G++  A  L+  M   G    V+T   L
Sbjct: 107 EEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFL 166

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +N  CK+ ++E +L  + +M S    P   T+  L  GLF   +V+ A   F+EM+H+ +
Sbjct: 167 LNALCKSGNLELALRYFEKMSSI---PCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI 223

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY   I+GL K G + EA  + + + V      +  Y+ +I G CK G +  A+ 
Sbjct: 224 P-NNWTYTVVINGLVKAGKVAEAERVLQEMPVPT----LANYTSVIGGHCKAGDMGKAYH 278

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + + R G   + +TYN +IHG C   ++D+A++L  +M++    P+  T++ L+ G  
Sbjct: 279 LLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLC 338

Query: 242 RNNETSKVVELL 253
           R    S+  +LL
Sbjct: 339 RAKRLSEARDLL 350



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 116/240 (48%), Gaps = 8/240 (3%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R     Y+   +    TG+ + A  LF        + + +TY  LI G C    ++ + +
Sbjct: 87  RHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACS 146

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           LY EM+ +G+RP V+T   L + L +   +E AL+ F++M     AA   T+   IDGL 
Sbjct: 147 LYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAA---TWTILIDGLF 203

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           +   + EA   F  ++          Y+ +I+GL K GK+  A  + Q +P    +P + 
Sbjct: 204 RAIRVDEACYYFEEMKHTAIPNNW-TYTVVINGLVKAGKVAEAERVLQEMP----VPTLA 258

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            Y  +I G C  G M KA+ L  DM+ KG   + +T+NTL+ G  R  E  +  ELL  M
Sbjct: 259 NYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM 318



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 115/271 (42%), Gaps = 32/271 (11%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   Y+TLIDGF     ++ A +LF+ M   G   +VVTY+TLI G C      E+ + 
Sbjct: 361 PNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSY 420

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             EM+ K I P V  Y+++  GL    +++ A  +FD M  +      + YN+ I GLCK
Sbjct: 421 LEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCK 480

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF-------------- 183
            G + +A    + +    C      Y  LI GLC+  + + A +L+              
Sbjct: 481 TGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETS 540

Query: 184 --------------QSLPRV----GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
                         Q + RV    G  P    Y  +I   C +  + +A  L  DM   G
Sbjct: 541 CNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAG 600

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + P+  T + L+    R ++    +  L  M
Sbjct: 601 IKPDGSTVDALVGAMCRQDKAVVAMAFLEEM 631



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 34/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D AS + D M+  G +PN  VY++LI G C TG +  A+     M   GC  + VTY T
Sbjct: 449 LDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGT 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIR--------------------------------P 88
           LI G C+    +E+ +LY   L +GI                                 P
Sbjct: 509 LIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSP 568

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T   Y T+   L + + +  A +L ++M  + +  + ST +  +  +C+    V A    
Sbjct: 569 TAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFL 628

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL-PRVGLMPNVVTYNIMIHGFCN 207
             +  L  +  +  YS L++ L K GK   A  + + L       P+ + Y  +I  + N
Sbjct: 629 EEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSN 688

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             Q+++A ++  ++++K    + V +NTL+ G  R      V ELL  M +RN
Sbjct: 689 QDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREM-KRN 740



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 9/258 (3%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA   L+ M+ + + P   VYS++I G C  GE+D A  +F SM  NGC  N+  YN+L
Sbjct: 415 SEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSL 474

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G CKT  + ++     EM  +G  P  VTY TL  GL    + + A  L+       +
Sbjct: 475 IYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA---YSCLIDGLCKIGKLET 178
               ++ N  I  L      +E A+  R LRV+           Y+ +I+ LCK   L  
Sbjct: 535 EISETSCNVVIASL----RCLEQAQ--RVLRVVLATGNSPTAFFYATVIESLCKENNLAE 588

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +L + +   G+ P+  T + ++   C   +   A     +M   G  P+  T++TL+ 
Sbjct: 589 ARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLN 648

Query: 239 GCIRNNETSKVVELLHRM 256
              +  + S+   +L R+
Sbjct: 649 ALFKAGKPSEAHVVLRRL 666



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 8/259 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R+L +++  G  P AF Y+T+I+  C    +  AR+L   M   G   +  T + 
Sbjct: 551 LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDA 610

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA-LKLFDEMQHS 119
           L+   C+      ++    EM+  G +P+V TY+TL + LF+  +   A + L   + H+
Sbjct: 611 LVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHT 670

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE---AYSCLIDGLCKIGKL 176
               +   Y   I        + EA  +   L+ LK + GI+   AY+ L+ GL +   L
Sbjct: 671 SCFPDELWYVGLIAAYSNQDQVEEARNV---LQELKSKWGIQSIVAYNTLLKGLFRTRNL 727

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           +  +EL + + R   + N  T+NI+I GFC  GQ D+A  +  +M+ K + P+      L
Sbjct: 728 QMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK-KVLTPSAAIIKFL 786

Query: 237 MLGCIRNNETSKVVELLHR 255
           +    R     +  +L+ R
Sbjct: 787 VDELARAEREQESKDLVKR 805


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 130/245 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +  G  PN  VY+ LIDG+C  GE++ A ++F  MD N C  NV TY  LI+G CK+  V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E ++ L+S M+  G+ P VVTY  L  G      ++ A +L   M+ + +     T++  
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           ID LCK   + EA     +L     ++    Y+ LIDGLCK GK++ A EL Q +   G 
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +P+  +Y+ +I G C   ++ +A  +  DM  KG+  + VT+  ++   +R   +    +
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 252 LLHRM 256
           +  +M
Sbjct: 444 IFDKM 448



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 119/234 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A + L  ++  G+ P+++ Y++ + G+C  G +  A  +FV M + GC+    TY  L++
Sbjct: 91  AKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLH 150

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G      V E++ ++  M +    P    Y T+ HGL E  + E A  L +E   +    
Sbjct: 151 GLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEP 210

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YN  IDG C  G +  A ++F  +   +C   +  Y+ LI GLCK GK+E A  LF
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   GL PNVVTY  +I G CN+G +  A  L   ME  G+ PN  TF+ L+
Sbjct: 271 SRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A R+  LM  RG    AF Y+ L+ G    G +  A  +FV M  + C  +   Y T
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G C+    EE+  L  E +S G  P +V YN L  G     ++EHALK+F+ M  + 
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   I GLCK+G +  A  LF  +     E  +  Y+ LI G C  G L+ A+
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL+PN  T++++I   C   ++++A      +  KGV  N V + +L+ G 
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 241 IRNNETSKVVELLHRM 256
            +  +     EL+ +M
Sbjct: 363 CKTGKIDAADELMQKM 378



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 118/243 (48%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+  VY+T++ G C  G  + A  L      NG   N+V YN LI+GYC   ++E +L +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +  M      P V TY  L HGL +  +VE A+ LF  M  + +     TY   I G C 
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G++  A  L   +           +S LID LCK  K+E A     SL + G+  N V 
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  +I G C  G++D A +L   M ++G  P+  ++++L+ G  R  + S+   +L  M 
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 258 ERN 260
           E+ 
Sbjct: 415 EKG 417



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 115/239 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   Y+TLI+ +CL G+I  A++   S+   G   +   Y + + GYC+   +  +  ++
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M  +G   T  TY  L HGL     V  A+ +F  M+    A +T  Y T + GLC+ 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G   EA  L         E  I  Y+ LIDG C  G++E A ++F+ +      PNV TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
             +IHG C  G++++A  LF  M   G+ PN VT+  L+ G            LLH M+
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 12/265 (4%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++ D MI  G+ P+   Y+  +  +C  G ++ A  + V M   G   N+VTYNTLI GY
Sbjct: 443 KIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH------------GLFEIHQVEHALKLF 113
                V ++ + +  M+ KG +P   +Y  L               +++I  ++    L 
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLL 562

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +++    +      Y+ FI  LC+   + EA   F  ++        + Y+ +ID  C++
Sbjct: 563 EDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRL 622

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
             L  A  L  S+ + G +P++ +Y I+I   C  G    A ++F D+  K    + + +
Sbjct: 623 KILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVW 682

Query: 234 NTLMLGCIRNNETSKVVELLHRMDE 258
             L+ G ++    ++   LL  M E
Sbjct: 683 KILIYGLLQKGSVAEFSSLLSVMKE 707



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 88/251 (35%), Gaps = 48/251 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  ++  M+ RGV PN   Y+TLI G+   G + +A   F  M   G   N  +Y  
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532

Query: 61  L-----------------------------------------------INGYCKTKDVEE 73
           L                                               I   C+   +EE
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEE 592

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           + + +  M +  + P+   Y ++      +  +  AL L D M  S       +Y   I 
Sbjct: 593 AKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIIS 652

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            LC+ G    A E+F  L + +       +  LI GL + G +     L   +   G  P
Sbjct: 653 SLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQP 712

Query: 194 NVVTYNIMIHG 204
           +  T N MI G
Sbjct: 713 S-NTINAMITG 722


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 136/259 (52%), Gaps = 5/259 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  LL  M  + + P  F+ + L+   C  G++D A EL+  +  + C  + ++YN L
Sbjct: 89  DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNML 147

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM----Q 117
             G CK   ++ +L ++ EM    + P+++TYN L +G     ++E A+ L +EM    +
Sbjct: 148 TYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKK 207

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            SDV  +  +YNT I G CK   +  A  + R +    C   +  ++ L+DGLC  GKL+
Sbjct: 208 GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLD 267

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +F+ +      P  VTY ++I G     ++DKA+D F+DM  +GV PN  T+  L+
Sbjct: 268 EANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALI 327

Query: 238 LGCIRNNETSKVVELLHRM 256
            G    N+    +E+L RM
Sbjct: 328 GGLCDANKVEDALEILKRM 346



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 122/236 (51%), Gaps = 4/236 (1%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ L  G C   +IDRA  +F  M+ N  + +++TYN L+ GYC+   +E+++ L  EM+
Sbjct: 144 YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMI 203

Query: 83  --SKG--IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
              KG  + P + +YNT+  G  +  Q+  A  +   M  S  +    T+NT +DGLC  
Sbjct: 204 EGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLT 263

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA  +F  +    CE     Y+ LI G  +  +++ A + F  + R G+ PNV TY
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             +I G C+  +++ A ++   M + G  PN VT+  ++    +  +  +  +L +
Sbjct: 324 TALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFN 379



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 110/226 (48%), Gaps = 3/226 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  MI+ G  PN   ++TL+DG CLTG++D A  +F  M    C    VTY  LI 
Sbjct: 234 ARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLIT 293

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+ +   ++++ + + +ML +G+ P V TY  L  GL + ++VE AL++   M  +    
Sbjct: 294 GHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREP 353

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              TY   I  LCK G I  A +LF      R  KC+    AYS +I  LC+  K   A+
Sbjct: 354 NVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAY 413

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           E F  +    L+     Y  M  G     + +K   + L+  A G+
Sbjct: 414 EYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERVCLEASAHGI 459



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 9/257 (3%)

Query: 1   MDEASRLLDLMIQ----RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV 56
           M++A  LL+ MI+      V P+ + Y+T+I GFC   ++  AR +   M  +GC  NVV
Sbjct: 192 MEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVV 251

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           T+NTL++G C T  ++E+  ++  M+ +   PT VTY  L  G     +++ A   F +M
Sbjct: 252 TFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDM 311

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               V     TY   I GLC    + +A E+ + +     E  +  Y+ +I  LCK G++
Sbjct: 312 LRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQI 371

Query: 177 ETAWELFQSL---PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVT 232
           E A +LF            P+   Y+ +I+  C   +  +A++ FL M E+K VA   + 
Sbjct: 372 ERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHI- 430

Query: 233 FNTLMLGCIRNNETSKV 249
           +  +  G     ET KV
Sbjct: 431 YKAMADGLELVQETEKV 447



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 5/208 (2%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           H V TYN  +N   K     ++  ++ +ML K   P + TY  +  GL +  + + AL+L
Sbjct: 35  HTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALEL 94

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
             +M+   +   T   N  +  LCKNG +  A EL++ L   +C L   +Y+ L  GLCK
Sbjct: 95  LQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSD-ECSLDRISYNMLTYGLCK 153

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM----EAKGVAP 228
             +++ A  +F  +    ++P+++TYN +++G+C  G+M++A  L  +M    +   V P
Sbjct: 154 ADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVP 213

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +  ++NT++ G  +  +      +L RM
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRM 241



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%)

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y+  ++ L K G    A ++F  +     +PN+ TY I++ G C+D + D A +L  DME
Sbjct: 40  YNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDME 99

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +K + P     N L+    +N +     EL  R+ +
Sbjct: 100 SKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSD 135


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 136/259 (52%), Gaps = 5/259 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  LL  M  + + P  F+ + L+   C  G++D A EL+  +  + C  + ++YN L
Sbjct: 89  DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNML 147

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM----Q 117
             G CK   ++ +L ++ EM    + P+++TYN L +G     ++E A+ L +EM    +
Sbjct: 148 TYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKK 207

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            SDV  +  +YNT I G CK   +  A  + R +    C   +  ++ L+DGLC  GKL+
Sbjct: 208 GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLD 267

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +F+ +      P  VTY ++I G     ++DKA+D F+DM  +GV PN  T+  L+
Sbjct: 268 EANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALI 327

Query: 238 LGCIRNNETSKVVELLHRM 256
            G    N+    +E+L RM
Sbjct: 328 GGLCDANKVEDALEILKRM 346



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 122/236 (51%), Gaps = 4/236 (1%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ L  G C   +IDRA  +F  M+ N  + +++TYN L+ GYC+   +E+++ L  EM+
Sbjct: 144 YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMI 203

Query: 83  --SKG--IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
              KG  + P + +YNT+  G  +  Q+  A  +   M  S  +    T+NT +DGLC  
Sbjct: 204 EGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLT 263

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA  +F  +    CE     Y+ LI G  +  +++ A + F  + R G+ PNV TY
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             +I G C+  +++ A ++   M + G  PN VT+  ++    +  +  +  +L +
Sbjct: 324 TALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFN 379



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 110/226 (48%), Gaps = 3/226 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L  MI+ G  PN   ++TL+DG CLTG++D A  +F  M    C    VTY  LI 
Sbjct: 234 ARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLIT 293

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+ +   ++++ + + +ML +G+ P V TY  L  GL + ++VE AL++   M  +    
Sbjct: 294 GHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREP 353

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              TY   I  LCK G I  A +LF      R  KC+    AYS ++  LC+  K   A+
Sbjct: 354 NVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAY 413

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           E F  +    L+     Y  M  G     + +K   + L+  A G+
Sbjct: 414 EYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERVCLEASAHGI 459



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 9/257 (3%)

Query: 1   MDEASRLLDLMIQ----RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV 56
           M++A  LL+ MI+      V P+ + Y+T+I GFC   ++  AR +   M  +GC  NVV
Sbjct: 192 MEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVV 251

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           T+NTL++G C T  ++E+  ++  M+ +   PT VTY  L  G     +++ A   F +M
Sbjct: 252 TFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDM 311

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
               V     TY   I GLC    + +A E+ + +     E  +  Y+ +I  LCK G++
Sbjct: 312 LRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQI 371

Query: 177 ETAWELFQSL---PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVT 232
           E A +LF            P+   Y+ +++  C   +  +A++ FL M E+K VA   + 
Sbjct: 372 ERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHI- 430

Query: 233 FNTLMLGCIRNNETSKV 249
           +  +  G     ET KV
Sbjct: 431 YKAMADGLELVQETEKV 447



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 5/208 (2%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           H V TYN  +N   K     ++  ++ +ML K   P + TY  +  GL +  + + AL+L
Sbjct: 35  HTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALEL 94

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
             +M+   +   T   N  +  LCKNG +  A EL++ L   +C L   +Y+ L  GLCK
Sbjct: 95  LQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSD-ECSLDRISYNMLTYGLCK 153

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM----EAKGVAP 228
             +++ A  +F  +    ++P+++TYN +++G+C  G+M++A  L  +M    +   V P
Sbjct: 154 ADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVP 213

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +  ++NT++ G  +  +      +L RM
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRM 241



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%)

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y+  ++ L K G    A ++F  +     +PN+ TY I++ G C+D + D A +L  DME
Sbjct: 40  YNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDME 99

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +K + P     N L+    +N +     EL  R+ +
Sbjct: 100 SKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSD 135


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 128/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  + + G+ P    Y+TLIDG+C  G ++ AR L   M   GC  +V TY  
Sbjct: 400 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI 459

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K +++  +   + EMLSKG++P    YNT       +     A +L + M    
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKG 519

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T TYN  IDGLCK G + +A +L   +     +     Y+CLI   C+ G L  A 
Sbjct: 520 IYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEAR 579

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL P+VVTY I+IH  C  G +  A+  F  M   G+ PN +T+N L+   
Sbjct: 580 KLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 639

Query: 241 IRNNETSKVVELLHRMDER 259
            R   T       H M ER
Sbjct: 640 CRTGRTLLAYHHFHEMLER 658



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 117/236 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    D M+ +G++P+ F Y+T I    + G+  +A +L   M + G   + VTYN +I+
Sbjct: 473 AREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIID 532

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CKT +++++ +L  +M+S G++P  +TY  L H   E   +  A KL + M    +  
Sbjct: 533 GLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQP 592

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   I   C+ G +  A   FR +  +  E     Y+ LI  LC+ G+   A+  F
Sbjct: 593 SVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHF 652

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   GL PN  TY ++I G C +G    A  L+ +M   G+ P+  T N L  G
Sbjct: 653 HEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 708



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 129/278 (46%), Gaps = 36/278 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN--GCMHNVVTYNTLINGYCKT 68
           M+Q  + P    Y+TL+D F   G  D A  L   M+    GC+ N VTYN +I+   + 
Sbjct: 234 MLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLARE 293

Query: 69  KDVEESLNLYS----------------------------------EMLSKGIRPTVVTYN 94
             +E +  L                                    EM ++GI PT+VTYN
Sbjct: 294 GHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYN 353

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + HGL +  QVE A   F EM+   +  +  TYN+ ++G CK G + EA  L   LR  
Sbjct: 354 AIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRA 413

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                +  Y+ LIDG C++G LE A  L + +   G  P+V TY I+++G      +  A
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMA 473

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            + F +M +KG+ P+C  +NT +   +   +T K  +L
Sbjct: 474 REFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQL 511



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 36/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A++L+D M +   + ++F Y+ LI      G + +   L + M+  G M  +VTYN 
Sbjct: 296 LENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNA 354

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  K++ VE +   ++EM + G+ P ++TYN++ +G  +   ++ AL L  +++ + 
Sbjct: 355 IIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAG 414

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TYNT IDG C+ G + EA  L   +    C   +  Y+ L++G  K+  L  A 
Sbjct: 415 LAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAR 474

Query: 181 ELFQSLPRVGLM-----------------------------------PNVVTYNIMIHGF 205
           E F  +   GL                                    P+ VTYN++I G 
Sbjct: 475 EFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGL 534

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C  G +  A DL + M + G+ P+C+T+  L+         S+  +LL+ M
Sbjct: 535 CKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGM 585



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 6/213 (2%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +L ++M+ +G+ P+   Y+ +IDG C TG +  A++L + M  +G   + +TY  LI
Sbjct: 507 KAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLI 566

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +C+   + E+  L + M+S G++P+VVTY  L H       +  A   F +M    + 
Sbjct: 567 HAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIE 626

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I  LC+ G  + A   F  +           Y+ LIDG C+ G    A  L
Sbjct: 627 PNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRL 686

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           +  + + G+ P+  T+N +  GF      DK H
Sbjct: 687 YFEMHQNGIPPDYCTHNALFKGF------DKGH 713



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 3/207 (1%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV--VTYNTLFHGLFEIHQVEHALKL 112
           +VTYNTL++ + K    +E+  L  EM ++G    +  VTYN +   L     +E+A KL
Sbjct: 243 IVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKL 302

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
            D M+ S   A + TYN  I  L + G++ +   L   +        +  Y+ +I GL K
Sbjct: 303 VDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLK 361

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
             ++E A   F  +  +GL+P+++TYN M++G+C  G + +A  L  D+   G+AP  +T
Sbjct: 362 SEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLT 421

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           +NTL+ G  R     +   L   M E+
Sbjct: 422 YNTLIDGYCRLGGLEEARRLKEEMVEQ 448



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 3/179 (1%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--QHSDVAAETSTYNTFIDG 134
           +Y EML   I PT+VTYNTL     +  + + A  L  EM  Q         TYN  I  
Sbjct: 230 VYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISF 289

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L + G++  AA+L  ++R+ K +     Y+ LI  L + G ++    L   +   G+MP 
Sbjct: 290 LAREGHLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPT 348

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VTYN +IHG     Q++ A   F +M A G+ P+ +T+N+++ G  +     + + LL
Sbjct: 349 LVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLL 407



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 1/106 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+ PN   Y+ LI   C TG    A   F  M   G   N  TY  LI+G C+  +
Sbjct: 620 MLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGN 679

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
             +++ LY EM   GI P   T+N LF G F+   + HA++  + +
Sbjct: 680 WADAIRLYFEMHQNGIPPDYCTHNALFKG-FDKGHMYHAIEYLENI 724



 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 2/95 (2%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           +C++  L    + +    +++ + ++ + P +VTYN ++  F  +G+ D+A  L  +ME 
Sbjct: 212 NCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMET 271

Query: 224 KGVA--PNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +G     N VT+N ++    R        +L+  M
Sbjct: 272 QGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM 306


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 128/250 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L++ M+  G  PN   +STLI   C  G  +R  E+   M  +GC  +V  Y T+I+G C
Sbjct: 239 LMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVC 298

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K + +E +  + + M S G+ P VV YNTL  GL    + E A  L  EM   D   +  
Sbjct: 299 KEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDV 358

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N  +D LC+NG +    E+   +    C   +  Y+ +I+G CK G ++ A  L +S+
Sbjct: 359 TFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM 418

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  PN V+Y I++ G C+  +   A +L   M  +G  PN VTFNTL+    +    
Sbjct: 419 AACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 478

Query: 247 SKVVELLHRM 256
            + +ELL +M
Sbjct: 479 EQAIELLKQM 488



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 131/255 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  LL  M  +    +   ++ L+D  C  G +DR  E+   M  +GCM +V+TY T+
Sbjct: 339 EEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTV 398

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING+CK   ++E++ L   M + G RP  V+Y  +  GL    +   A +L  +M     
Sbjct: 399 INGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGC 458

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+NT I+ LCK G + +A EL + + V  C   + +YS +IDGL K G  + A E
Sbjct: 459 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALE 518

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + + G+ PN + Y+ +      +G+++K   +F +++   V  + V +N ++    
Sbjct: 519 LLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLC 578

Query: 242 RNNETSKVVELLHRM 256
           +  ET + +E L  M
Sbjct: 579 KRGETDRAIEFLAYM 593



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 128/250 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G  P+  +Y+T+IDG C    ++ AR +   M   G   NVV YNTL+ G C    
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            EE+  L +EM  K      VT+N L   L +   V+  +++ ++M       +  TY T
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTT 397

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+G CK G I EA  L R++    C     +Y+ ++ GLC   +   A EL   + + G
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             PN VT+N +I+  C  G +++A +L   M   G +P+ ++++T++ G  +   T + +
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517

Query: 251 ELLHRMDERN 260
           ELL+ M ++ 
Sbjct: 518 ELLNVMVKKG 527



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 1/261 (0%)

Query: 1   MDEASRLL-DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA RLL DL+   G  P+   Y+ ++ G C+       ++L   M   GC  N+VT++
Sbjct: 197 VDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFS 256

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TLI   C+    E    ++++M   G  P V  Y T+  G+ +  ++E A  + + M   
Sbjct: 257 TLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSY 316

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            ++     YNT + GLC      EA  L   +    C L    ++ L+D LC+ G ++  
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRV 376

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+ + +   G MP+V+TY  +I+GFC +G +D+A  L   M A G  PN V++  ++ G
Sbjct: 377 IEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKG 436

Query: 240 CIRNNETSKVVELLHRMDERN 260
                      EL+ +M ++ 
Sbjct: 437 LCSAERWVDAEELMSQMIQQG 457



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M +RG  P   +Y   ++  C       A  +   +   GC  +V   N ++
Sbjct: 129 DALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVL 188

Query: 63  NGYCKTKDVEESLNLYSEML-SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
              C    V+E++ L  ++L S G  P VV+YN +  GL    +  H   L +EM  +  
Sbjct: 189 QAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGC 248

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T++T I  LC+NG      E+   +    C   +  Y+ +IDG+CK  +LE A  
Sbjct: 249 PPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARG 308

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +P  GL PNVV YN ++ G C+  + ++A  L  +M  K    + VTFN L+    
Sbjct: 309 ILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368

Query: 242 RNNETSKVVELLHRMDE 258
           +N    +V+E+L +M E
Sbjct: 369 QNGLVDRVIEVLEQMLE 385



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 113/226 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M   G RPN   Y+ ++ G C       A EL   M   GC  N VT+NT
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   VE+++ L  +ML  G  P +++Y+T+  GL +    + AL+L + M    
Sbjct: 468 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG 527

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  T  Y++    L   G I +  ++F  ++          Y+ +I  LCK G+ + A 
Sbjct: 528 MSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAI 587

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           E    +   G +PN  TY I+I G  ++G + +A ++  ++ +KG 
Sbjct: 588 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGA 633



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 124/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L+ M   G+ PN   Y+TL+ G C     + A  L   M    C  + VT+N 
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNI 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  C+   V+  + +  +ML  G  P V+TY T+ +G  +   ++ A+ L   M    
Sbjct: 363 LVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T +Y   + GLC     V+A EL   +    C      ++ LI+ LCK G +E A 
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 482

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + +   G  P++++Y+ +I G    G  D+A +L   M  KG++PN + ++++    
Sbjct: 483 ELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASAL 542

Query: 241 IRNNETSKVVELLHRMDE 258
                 +KV+++   + +
Sbjct: 543 SGEGRINKVIQMFENIQD 560



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 1/246 (0%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PNA+ Y  L+   C  G I  A  +   M   GC      Y+  +   C+      ++
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETSTYNTFIDG 134
            +  ++  +G    V   N +   + +   V+ A++L  ++  S     +  +YN  + G
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC         +L   +    C   I  +S LI  LC+ G  E   E+   +   G  P+
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V  Y  +I G C + +++ A  +   M + G++PN V +NTL+ G    +   +   LL 
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 255 RMDERN 260
            M +++
Sbjct: 347 EMFDKD 352



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 4/202 (1%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN ++ GYC+     +         S  + P   TY  L   L    ++  AL + D+M 
Sbjct: 82  YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
               A     Y+  ++  C+      A  + R L    C L +   + ++  +C  G ++
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 178 TAWELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            A  L +  LP  G  P+VV+YN ++ G C   +     DL  +M A G  PN VTF+TL
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           +    RN    +V E+  +M E
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAE 280



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y+ ++ G C+ G+L  A  L  S+P   + PN  TY  ++   C  G++  A  +  DM 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +G AP    ++  +    R +     V +L  +  R 
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 132/242 (54%), Gaps = 9/242 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + D MI++G  P+A  Y T+I  F   G ++ A E+   M  +G   +   YN+L+
Sbjct: 336 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 395

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDV 121
           +GY K + V+++  +Y  M++ GI+P  VT+N L HGLF+  + + A  LF EM +  +V
Sbjct: 396 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEV 455

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKLE 177
                +Y   IDGL K G + EA   F+ +     + GI      Y+ LI  L K G++ 
Sbjct: 456 PPTLVSYTILIDGLGKAGRVSEAFLQFQEM----IDRGIIPECHTYTSLIYSLAKAGRIP 511

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +L + + ++G+ P+V  Y+ +I G  +   +D A D+F +M  +G APN VT+  L 
Sbjct: 512 EAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLR 571

Query: 238 LG 239
            G
Sbjct: 572 RG 573



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 131/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++ + M+Q+G  P+   Y+TLIDGF    ++D AR+L   M   G     VTY +
Sbjct: 194 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 253

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G+CK   + E+  + ++M  +G  P +  + +L        + E A ++  EM    
Sbjct: 254 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 313

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A +   Y + ID L   G + EA  +F ++    C      Y  +I    KIG +E A 
Sbjct: 314 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 373

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+ + + + G+ P+   YN ++ G+    ++D+A  ++  M A G+ PN VTFN LM G 
Sbjct: 374 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 433

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ +T +   L   M E+
Sbjct: 434 FKDGKTDRAFSLFKEMLEK 452



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 130/259 (50%), Gaps = 12/259 (4%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID----RARELFVSMDINGCMHNVVTYNTL 61
           +LL+  ++R  RP+ F+Y+++I G+C  G++D    RA     S+D       V++Y T+
Sbjct: 63  KLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLD-------VISYTTV 114

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G   +K ++E+  L+ E+ + G  P VV Y  +  GL +  ++E  LK F+EM  S  
Sbjct: 115 IKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSC 174

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY   IDGLCK   + +A ++F  +    C      Y+ LIDG  K  K++ A +
Sbjct: 175 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 234

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G  P  VTY  ++HGFC    +++A ++   M  +G  P    F +L+   +
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL 294

Query: 242 RNNETSKVVELLHRMDERN 260
                 +  ++L  M  R 
Sbjct: 295 SKGRAEEAYQVLTEMTARG 313



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 1/260 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA ++L  M  RG  P+  +Y++LID    TG +  AR +F SM   GC  + +TY T+
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I  + K  +VE +  +   M   G+ P    YN+L  G  ++ +V+ A  ++D M  S +
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRT-LRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                T+N  + GL K+G    A  LF+  L   +    + +Y+ LIDGL K G++  A+
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             FQ +   G++P   TY  +I+     G++ +A  L  DM   GV P+   ++ L+ G 
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539

Query: 241 IRNNETSKVVELLHRMDERN 260
           I ++      ++   M +R 
Sbjct: 540 IDSSMVDTAWDVFQEMMKRG 559



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA +  + MI  G  P+   ++TLI GFC  G+     +L ++  +     +V  Y +
Sbjct: 23  MDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL-LNQALKRFRPDVFLYTS 81

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK  D++     Y   ++      V++Y T+  GL +  +++ A +LF+E++ + 
Sbjct: 82  VIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAG 138

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +     Y   IDGL K G I +  + F  +    C      Y+ +IDGLCK   L  A 
Sbjct: 139 CSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDAC 198

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ + + G +P+ +TY  +I GF    +MD+A  L   M  KG  P  VT+ +++ G 
Sbjct: 199 KVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 258

Query: 241 IRNNETSKVVELLHRMDERN 260
            + +  ++  E++ +M ER 
Sbjct: 259 CKLDMINEAKEVIAQMRERG 278



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 129/258 (50%), Gaps = 3/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + +   G  PN   Y+ +IDG    G I+   + F  M  + C+    TY  
Sbjct: 124 IDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTV 183

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK + + ++  ++ +M+ KG  P  +TY TL  G  +  +++ A KL D M    
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 243

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY + + G CK   I EA E+   +R   CE G+  ++ L+      G+ E A+
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 303

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM--L 238
           ++   +   G  P+V+ Y  +I    + G++ +A  +F  M  KG AP+ +T+ T++   
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363

Query: 239 GCIRNNETS-KVVELLHR 255
             I N E + +++EL+ +
Sbjct: 364 SKIGNVEAAGEILELMAK 381



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 4/234 (1%)

Query: 8   LDLMIQRGVRPNAFV----YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           LD    R V P A +    Y+T+I G   +  ID A ELF  +   GC  NVV Y  +I+
Sbjct: 92  LDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVID 151

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G  K   +E+ L  + EM      PT  TY  +  GL +   +  A K+F++M       
Sbjct: 152 GLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVP 211

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +T TY T IDG  K   + EA +L   +     E     Y  ++ G CK+  +  A E+ 
Sbjct: 212 DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVI 271

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   G  P +  +  ++  + + G+ ++A+ +  +M A+G AP+ + + +L+
Sbjct: 272 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLI 325



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 31/238 (13%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           GC   +V+YNT+I+G      ++E+   ++ M+  G  P V+ + TL HG  +  Q +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 110 LKLFDEMQ---HSDVAAETS----------------------------TYNTFIDGLCKN 138
            KL ++       DV   TS                            +Y T I GL  +
Sbjct: 62  HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             I EA ELF  L+   C   + AY+ +IDGL K G++E   + F+ +     +P   TY
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            ++I G C    +  A  +F  M  KG  P+ +T+ TL+ G  + ++  +  +LL  M
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 38/71 (53%)

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G  P +V+YN +I G  +  +MD+A+  F  M   G  P+ + F TL+ G  +  +   
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 249 VVELLHRMDER 259
             +LL++  +R
Sbjct: 61  GHKLLNQALKR 71


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 129/243 (53%), Gaps = 4/243 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PNAF Y+ +I G    G    A E+F  M     + N +TYNT+I+G+ K  D+E    L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +M+  G++P  +TYN L  GL    ++     L DEM    +  +  TY+   DGL +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           NG       LF   + LK  + I  Y+C  L++GLCK GK+  A E+ QSL   GL+P  
Sbjct: 133 NGDSKAMLSLFG--KYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           V YN +I+G+C  G+++ A   F  M+++ + P+ +T+N L+ G  +    +   +LL  
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250

Query: 256 MDE 258
           M +
Sbjct: 251 MQD 253



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 130/256 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + D M +R V PN   Y+T+IDG    G+++    L   M  +G   N +TYN L+
Sbjct: 33  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 92

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+  L  EM S+ + P   TY+ LF GL      +  L LF +   + V 
Sbjct: 93  SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVT 152

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T +  ++GLCK+G +  A E+ ++L           Y+ LI+G C+ G+LE A+  
Sbjct: 153 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 212

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +    + P+ +TYN +I+G C   ++  A DL ++M+  GV P   TFNTL+    R
Sbjct: 213 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 272

Query: 243 NNETSKVVELLHRMDE 258
             +  K   +L  M E
Sbjct: 273 TGQLEKCFIVLSEMQE 288



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 35/280 (12%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++ GV    +  S L++G C  G++  A E+  S+   G +   V YNTLINGYC+T ++
Sbjct: 147 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 206

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E + + + +M S+ I+P  +TYN L +GL +  ++ +A  L  EMQ + V     T+NT 
Sbjct: 207 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 266

Query: 132 ID-----------------------------------GLCKNGYIVEAAELFRTLRVLKC 156
           ID                                     CKNG I EA  +   +     
Sbjct: 267 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 326

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
               + Y+ +ID   + G  + A+ L + +   G+ P++VTYN++I G CN  Q+ +A +
Sbjct: 327 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 386

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   +    + P+ V++NTL+  C       K ++L  RM
Sbjct: 387 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 426



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E S LLD M  + + P+ F YS L DG    G+      LF     NG      T + 
Sbjct: 101 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSI 160

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   V  +  +   +++ G+ PT V YNTL +G  +  ++E A   F +M+   
Sbjct: 161 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 220

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+GLCK   I  A +L   ++       +E ++ LID   + G+LE  +
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   GL PNVV+Y  +++ FC +G++ +A  +  DM  K V PN   +N ++   
Sbjct: 281 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 340

Query: 241 IRNNETSKVVELLHRM 256
           + +    +   L+ +M
Sbjct: 341 VEHGPNDQAFILVEKM 356



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 125/250 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M  R ++P+   Y+ LI+G C    I  A++L + M  NG    V T+NTLI+ Y +T  
Sbjct: 216 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 275

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +E+   + SEM   G++P VV+Y ++ +   +  ++  A+ + D+M H DV      YN 
Sbjct: 276 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 335

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID   ++G   +A  L   ++       I  Y+ LI GLC   ++  A E+  SL    
Sbjct: 336 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L+P+ V+YN +I   C  G +DKA DL   M   G+     T++ L+ G       +++ 
Sbjct: 396 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 455

Query: 251 ELLHRMDERN 260
            L  +M + N
Sbjct: 456 YLYQKMMQNN 465



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 113/234 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M   GV P    ++TLID +  TG++++   +   M  NG   NVV+Y +++N
Sbjct: 244 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK   + E++ +  +M  K + P    YN +     E    + A  L ++M+ + ++ 
Sbjct: 304 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 363

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  I GLC    I EA E+  +L   +      +Y+ LI   C  G ++ A +L 
Sbjct: 364 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 423

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           Q + + G+   V TY+ +I G    G++++   L+  M    V P+    N ++
Sbjct: 424 QRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 477



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++   RL D M+  G++PNA  Y+ L+ G C  G +     L   M     + +  TY+ 
Sbjct: 66  LEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSI 125

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L +G  +  D +  L+L+ + L  G+     T + L +GL +  +V  A ++   + ++ 
Sbjct: 126 LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 185

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      YNT I+G C+ G +  A   F  ++    +     Y+ LI+GLCK  ++  A 
Sbjct: 186 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 245

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ P V T+N +I  +   GQ++K   +  +M+  G+ PN V++ +++   
Sbjct: 246 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 305

Query: 241 IRNNETSKVVELLHRM 256
            +N +  + V +L  M
Sbjct: 306 CKNGKIPEAVAILDDM 321



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 107/218 (49%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M + G++PN   Y ++++ FC  G+I  A  +   M     + N   YN +I+ Y 
Sbjct: 282 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 341

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +    +++  L  +M S GI P++VTYN L  GL    Q+  A ++ + + +  +  +  
Sbjct: 342 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 401

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I   C  G I +A +L + +     +  +  Y  LI GL   G+L     L+Q +
Sbjct: 402 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 461

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +  ++P+   +NIM+  +   G   KA DL  +M  K
Sbjct: 462 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 94/206 (45%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N  +YN +I G  +     +++ ++ EM  + + P  +TYNT+  G  +   +E   +L 
Sbjct: 14  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 73

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           D+M    +     TYN  + GLC+ G + E + L   +   K       YS L DGL + 
Sbjct: 74  DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 133

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G  +    LF    + G+     T +I+++G C DG++  A ++   +   G+ P  V +
Sbjct: 134 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 193

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           NTL+ G  +  E         +M  R
Sbjct: 194 NTLINGYCQTGELEGAFSTFGQMKSR 219



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 79/150 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  L++ M   G+ P+   Y+ LI G C   +I  A E+  S+  +  + + V+YNTL
Sbjct: 347 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 406

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+  C   +++++L+L   M   GI+ TV TY+ L  GL    ++     L+ +M  ++V
Sbjct: 407 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 466

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
               + +N  ++   K G  ++A +L + +
Sbjct: 467 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +++ +    + P+A  Y+TLI   C  G ID+A +L   M   G    V TY+ 
Sbjct: 381 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 440

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G      + E   LY +M+   + P+   +N +         VE   K  +E++  D
Sbjct: 441 LISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM---------VEAYSKYGNEIKAED 491

Query: 121 VAAE 124
           +  E
Sbjct: 492 LRKE 495


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 134/253 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L   M   G  P+   Y+TLI G C    +  A++ +  +  +G   + +TYN 
Sbjct: 117 IDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNI 176

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+CK   V E++ L +E++++G   T   YN +   LF+  ++  A   F+ M+   
Sbjct: 177 LVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDG 236

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T+   IDGLCK   +  A E+F +         +   SCL+DG CK G ++ AW
Sbjct: 237 VRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAW 296

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G  PN V+ NI+I+G C   ++ +A ++F ++  +   P+ VT++T M G 
Sbjct: 297 RIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGL 356

Query: 241 IRNNETSKVVELL 253
            R +   +  ++L
Sbjct: 357 CRAHRVDQARQVL 369



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 132/235 (56%), Gaps = 1/235 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA    + M + GVRP    ++ LIDG C    + RA+E+F S   +G   +VV  + L+
Sbjct: 224 EAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLM 283

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK   V+E+  ++  M ++G  P  V+ N L +GL +  ++  A ++F+E+      
Sbjct: 284 DGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAK 343

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+TF+DGLC+   + +A ++   L        +  Y+ LI GLC +G+L+ A ++
Sbjct: 344 PDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKV 403

Query: 183 FQ-SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           F+  +   G  PN  T N++++GF   G++D+A +LF     +GV P+C TF+ +
Sbjct: 404 FEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAM 458



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 132/256 (51%), Gaps = 5/256 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNT 60
           +E  +++ LM+ R       + +  ID  C +  ID+A   F  + D  G + N V+YN 
Sbjct: 48  EECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRG-LVNTVSYNI 106

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +CKTK ++E++ L+ EM + G  P+  TYNTL  GL  + ++  A + ++ +  S 
Sbjct: 107 LINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSG 166

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             A   TYN  +DG CK   + EA EL   L      +    Y+C+ID L K GK+  A 
Sbjct: 167 AGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAE 226

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  + + G+ P  VT+ ++I G C   ++ +A ++F      G +P+ V  + LM G 
Sbjct: 227 LFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGF 286

Query: 241 IRN---NETSKVVELL 253
            +    +E  ++ EL+
Sbjct: 287 CKYGGVDEAWRIFELM 302



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 121/242 (50%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   Y+ LI+ FC T  ID A +LF  M   GC  +  TYNTLI G C+ + + E+   Y
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             +LS G   + +TYN L  G  +  +V  A++L +E+        ++ YN  ID L K 
Sbjct: 160 ERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKK 219

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G I EA   F  +           ++ LIDGLCK  ++  A E+F S    G  P+VV  
Sbjct: 220 GKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVIC 279

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           + ++ GFC  G +D+A  +F  M  +G  PN V+ N L+ G  +    S+  E+   + +
Sbjct: 280 SCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVK 339

Query: 259 RN 260
           R 
Sbjct: 340 RQ 341



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 1/258 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL+ ++ RG    +  Y+ +ID     G+I  A   F  M+ +G     VT+  LI
Sbjct: 189 EAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLI 248

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   V  +  ++   L  G  P+VV  + L  G  +   V+ A ++F+ M +    
Sbjct: 249 DGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCT 308

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               + N  I+GLCK   + +A E+F  +   + +  +  YS  +DGLC+  +++ A ++
Sbjct: 309 PNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQV 368

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF-LDMEAKGVAPNCVTFNTLMLGCI 241
              L   G  P+VV Y  +I G C+ G++D+A  +F +DM A G APN  T N L+ G  
Sbjct: 369 LCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFG 428

Query: 242 RNNETSKVVELLHRMDER 259
                 +  EL  R  ER
Sbjct: 429 LAGRLDEARELFQRFVER 446



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 36/258 (13%)

Query: 30  FCLTGEIDRARELFVSMDINGC--------------------------------MHNVVT 57
            C  G++D A ELF S+  +GC                                +     
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRERHL 68

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV--VTYNTLFHGLFEIHQVEHALKLFDE 115
            N  I+  CK+  ++++ + + E+  K  R  V  V+YN L +   +  +++ A++LF E
Sbjct: 69  VNITIDSLCKSDMIDKAESWFQEL--KDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGE 126

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           M+    A  TSTYNT I GLC+   + EA + +  L           Y+ L+DG CK  +
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +  A EL   L   G +     YN +I      G++ +A   F  ME  GV P  VTF  
Sbjct: 187 VPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTV 246

Query: 236 LMLGCIRNNETSKVVELL 253
           L+ G  + N  ++  E+ 
Sbjct: 247 LIDGLCKANRVARAKEIF 264



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 3/194 (1%)

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C    ++E+L L+  ++S G     +  + L   L +  + E  LK+   M       E 
Sbjct: 10  CHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRER 66

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
              N  ID LCK+  I +A   F+ L+  +  +   +Y+ LI+  CK  +++ A +LF  
Sbjct: 67  HLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGE 126

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G  P+  TYN +I G C   ++ +A   +  + + G   + +T+N L+ G  + + 
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186

Query: 246 TSKVVELLHRMDER 259
             + VELL+ +  R
Sbjct: 187 VPEAVELLNELVAR 200



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 5/80 (6%)

Query: 1   MDEASRLLDL-MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA ++ ++ M   G  PN F  + L++GF L G +D ARELF      G   +  T++
Sbjct: 397 LDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFS 456

Query: 60  TLINGYCKTKDVEESLNLYS 79
            + N   KT    E  ++YS
Sbjct: 457 AMANNTAKT----EGWDIYS 472


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 135/262 (51%), Gaps = 12/262 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   ++   M +RG  P+++ Y TLI G C  G ID A++LF  M    C   VVTY +
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C +K+V+E++    EM SKGI P V TY++L  GL +  +   A++LF+ M    
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF--RTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                 TY T I GLCK   I EA EL     L+ LK + G+  Y  +I G C I K   
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL--YGKVISGFCAISKFRE 350

Query: 179 AWELFQSLPRVGLMPNVVTYNI-------MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           A      +   G+ PN +T+NI       ++ G C +    +A  L+L M ++G++    
Sbjct: 351 AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSRGISVEVE 409

Query: 232 TFNTLMLGCIRNNETSKVVELL 253
           T  +L+    +  E  K V+L+
Sbjct: 410 TLESLVKCLCKKGEFQKAVQLV 431



 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 1/225 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLT-GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           M + G+ P     + LI   C   G +D   ++F+ M   GC  +  TY TLI+G C+  
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            ++E+  L++EM+ K   PTVVTY +L +GL     V+ A++  +EM+   +     TY+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           + +DGLCK+G  ++A ELF  +    C   +  Y+ LI GLCK  K++ A EL   +   
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           GL P+   Y  +I GFC   +  +A +   +M   G+ PN +T+N
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 1/223 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD-VEESLN 76
           P+   Y T++       +++ A + + +M   G    V + N LI   C+    V+  L 
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           ++ EM  +G  P   TY TL  GL    +++ A KLF EM   D A    TY + I+GLC
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
            +  + EA      ++    E  +  YS L+DGLCK G+   A ELF+ +   G  PN+V
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           TY  +I G C + ++ +A +L   M  +G+ P+   +  ++ G
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 5/191 (2%)

Query: 72  EESLNL----YSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHSDVAAETS 126
           E  LNL    Y  M   G+ PTV + N L   L      V+  LK+F EM       ++ 
Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 193

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T I GLC+ G I EA +LF  +    C   +  Y+ LI+GLC    ++ A    + +
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ PNV TY+ ++ G C DG+  +A +LF  M A+G  PN VT+ TL+ G  +  + 
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313

Query: 247 SKVVELLHRMD 257
            + VELL RM+
Sbjct: 314 QEAVELLDRMN 324



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 1/222 (0%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A +L V M I  C+ +     ++  GY +     +SL ++ +M      P+   Y T+  
Sbjct: 70  AEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA-ELFRTLRVLKCE 157
            L E +Q+  A K +  M+   +    ++ N  I  LC+N   V+A  ++F  +    C+
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
                Y  LI GLC+ G+++ A +LF  +      P VVTY  +I+G C    +D+A   
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +M++KG+ PN  T+++LM G  ++  + + +EL   M  R
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 95/209 (45%), Gaps = 4/209 (1%)

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSK---GIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           +T + +I      KDVE+S+ ++    ++   G      ++  +   L   ++ + A  L
Sbjct: 14  ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
              M+  +         +   G  +     ++  +F  ++   C+   +AY  ++  L +
Sbjct: 74  IVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVE 133

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCV 231
             +L  A++ ++++  +GL P V + N++I   C NDG +D    +FL+M  +G  P+  
Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 193

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           T+ TL+ G  R     +  +L   M E++
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKD 222



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 42/193 (21%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L ++M+ RG RPN   Y+TLI G C   +I  A EL   M++ G   +   Y  +I
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339

Query: 63  NGYCKTKDVEESLN-----------------------------------------LYSEM 81
           +G+C      E+ N                                         LY  M
Sbjct: 340 SGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSM 399

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
            S+GI   V T  +L   L +  + + A++L DE+          T+   I        +
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIV 459

Query: 142 VEAAE-LFRTLRV 153
            EA++ L R L +
Sbjct: 460 GEASDTLLRDLDI 472


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 38/298 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L  +M   G RPN+ +Y++LI GF  +G +  A  LF  M   G   +V+T+  
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK+ + E++   + EM+  G +P VVTY T+  GL +I +V +A ++   M    
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC--------- 171
              ++ TY   +DG CK G + EAA+L   L        ++ YS L+ GLC         
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490

Query: 172 ---------------------------KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                                      K G+L+ A  +FQ +   G  P+  TYNI+I+G
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 205 FCN--DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            C   + ++++A  L  D+E  G  P+ VT+  L +G  +  E  + V++L     R 
Sbjct: 551 LCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE--IDRARELFVSMDINGCMHNVVTY 58
           +DEA R+   M+  G +P+A  Y+ LI+G C + E  ++RA  L   +++ G + + VTY
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTY 581

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
             L  G CK  +V+ ++ +  E  S+G    VV Y  L  GL    QV+ A+ LF EM  
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
              A + + Y   I+GL K   + +A + F  +     +  +  Y+ L+  LC  G ++ 
Sbjct: 642 QGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701

Query: 179 AWELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           A+  F+  L R  L+ +V+ Y+ +IHGFC   ++D A  LF DM ++G  P  VT  +L 
Sbjct: 702 AFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLF 761

Query: 238 LGCIRNNETSKVVELLHRM 256
            G +R+ +T K  ELL  M
Sbjct: 762 DGLVRSGKTEKAQELLQEM 780



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +   M + G  P+A  Y+T+IDG    G    A ++  +M    C+   VTY  
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK   +E +  L+  M + G RP  V Y +L HG  +  +++ A  LFDEM  + 
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+   IDGLCK+G   +AA+ F  +    C+  +  Y+ +I GL KIG++  A+
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + + +   G  P+ VTY  ++ GFC  G++D+A  L  +++    +PN   +++L+ G
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKG 479



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 38/293 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++LD M+ +   P    Y  L++  C  G ++RA ELF  M  +G   N V Y +LI
Sbjct: 278 EALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K+  ++E+ +L+ EM+  G RP V+T+  +  GL +    E A K F+EM      
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK 397

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY T I GL K G +  A  + + +    C      Y CL+DG CK+G+L+ A +L
Sbjct: 398 PNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCND---------------------------------- 208
              L +    PN+  Y+ ++ G C+                                   
Sbjct: 458 LDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLC 517

Query: 209 --GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN--NETSKVVELLHRMD 257
             G++D+A  +F  M ++G  P+  T+N L+ G  R+  N   +   LLH ++
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 3/242 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+A  Y+ L  G C  GE+DRA ++       G   +VV Y  L  G C    V+ +
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           ++L+ EM+ +G  P    Y  + +GL +  ++E A K FDEM         +TY   +  
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 135 LCKNGYIVEAAELFRTLRVLKCEL--GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           LC  G + EA   F  + + + EL   +  Y  LI G CK  K++ A +LF+ +   G +
Sbjct: 693 LCHAGNVDEAFHRFEGM-LARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P  VT   +  G    G+ +KA +L  +M A G  P+  TF  ++ G  +++E+ K+++L
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811

Query: 253 LH 254
           + 
Sbjct: 812 VQ 813



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 1/247 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++ G+ PN F ++ LI  F  T   D A   F  M    C  ++ T+  L++  CK   
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204

Query: 71  VEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            E++  ++ EM++ G + P    +  +   L +  +V+ A ++F +M+      +   YN
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T IDGL K G+  EA ++   +    C      Y  L++ LCK G LE A ELF+ +   
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  PN V Y  +IHGF   G+M +A  LF +M   G  P+ +T   ++ G  ++    + 
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384

Query: 250 VELLHRM 256
            +    M
Sbjct: 385 AKSFEEM 391



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 122/250 (48%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           ++M    V P+  +++ ++        +  ARE+F  M+  G   + + YNT+I+G  K 
Sbjct: 214 EMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKA 273

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
              +E+L +   ML+K   PT VTY  L + L +   +E A +LF  M  S     +  Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            + I G  K+G + EA  LF  +        +  ++ +IDGLCK G  E A + F+ + R
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
            G  PNVVTY  +I G    G++  A  +   M A G  P+ VT+  L+ G  +     +
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453

Query: 249 VVELLHRMDE 258
             +LL  +D+
Sbjct: 454 AAQLLDELDK 463



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM-HNVVTYNT 60
           D+A    ++M ++  +P+   +  L+D  C  G  ++A E+F  M   G +  +   +  
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++    K K V+E+  ++ +M   G  P  + YNT+  GL +    + ALK+ D M    
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   ++ LCK G +  A ELFR +           Y+ LI G  K G+++ A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +   G  P+V+T+ +MI G C  G  ++A   F +M   G  PN VT+ T++ G 
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 241 IRNNETSKVVELLHRM 256
            +    +    ++  M
Sbjct: 411 SKIGRVANAFRIMKGM 426



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 43/293 (14%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R++  MI  G  P++  Y  L+DGFC  G +D A +L   +D      N+  Y++L+ 
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVK 478

Query: 64  GYC------------------------------------KTKDVEESLNLYSEMLSKGIR 87
           G C                                    KT  ++E+  ++  M+S+G +
Sbjct: 479 GLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538

Query: 88  PTVVTYNTLFHGLFEIHQ--VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           P   TYN L +GL    +  VE A  L  +++      +  TY     GLCK G +  A 
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ++            + AY+ L  GLC  G+++ A  LFQ + R G  P+   Y  +I+G 
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNNETSKVVELLHRMD 257
               +++ A   F +M  KG  P   T+  L+   C   N    V E  HR +
Sbjct: 659 IKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGN----VDEAFHRFE 707



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 36/245 (14%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G  H+V TYN L+N     K+  +   ++ EML  GI P   ++N L        + + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF--------------------R 149
           +  F+ M+      +  T+   +D LCK G   +A E+F                    R
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 150 TL--------------RVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           TL              ++ KC    +  AY+ +IDGL K G  + A ++  ++     +P
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
             VTY I+++  C  G +++A +LF  M A G  PN V + +L+ G  ++    +   L 
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 254 HRMDE 258
             M E
Sbjct: 354 DEMVE 358



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 1/116 (0%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA    + M+ RG +  +  +Y  LI GFC   ++D A +LF  M   G +   VT  
Sbjct: 699 VDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSA 758

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           +L +G  ++   E++  L  EM + G  P   T+  +  GL +  +    LKL  E
Sbjct: 759 SLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 35/282 (12%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +++GV   A+  S L++G C  G++ +A+++F  +   G +   V YNTLINGYC+ +D+
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDL 385

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
             +  ++ +M S+ IRP  +TYN L +GL ++  V  A  L  EM+ S V     T+NT 
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445

Query: 132 ID-----------------------------------GLCKNGYIVEAAELFRTLRVLKC 156
           ID                                     CKNG I EA  +   +     
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
               + Y+ +ID   + G  E A  L + +   G+  ++VTYN+++ G C   Q+D+A +
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           L   +  +G+ P+ V++NT++  C    +T K +ELL  M++
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNK 607



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 134/257 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++ D M+  GV PN   Y+T+IDG    G+++    L   M  +G   NVVTYN L+
Sbjct: 212 DALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLL 271

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+T  ++E+  L  EM S  + P   TY+ LF GL    + +  L LF E     V 
Sbjct: 272 SGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T +  ++GLCK+G + +A ++F  L           Y+ LI+G C++  L  A+ +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +    + P+ +TYN +I+G C    + KA DL ++ME  GV P+  TFNTL+     
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451

Query: 243 NNETSKVVELLHRMDER 259
             +  K   +L  M ++
Sbjct: 452 AGQLEKCFTVLSDMQQK 468



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 132/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDE   L+D M    + P+ F YS L DG   TGE      LF      G M    T + 
Sbjct: 280 MDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSI 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   V ++  ++  ++  G+ PT V YNTL +G  ++  +  A  +F++M+   
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+GLCK   + +A +L   +     +  +E ++ LID     G+LE  +
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   + + G+  +V+++  ++  FC +G++ +A  +  DM  K VAPN   +N+++   
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 241 IRNNETSKVVELLHRM 256
           I + +T + + L+ +M
Sbjct: 520 IESGDTEQALLLVEKM 535



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 131/243 (53%), Gaps = 4/243 (1%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+AF Y+ +I G   +G+   A ++F  M   G   N +TYNT+I+G+ K  D+E    L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
             +ML  G +P VVTYN L  GL    +++    L DEM    +  +  TY+   DGL +
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            G       LF     LK  + + AY+C  L++GLCK GK+  A ++F+ L   GL+P  
Sbjct: 312 TGESQTMLSLF--AESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTT 369

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           V YN +I+G+C    +  A  +F  M+++ + P+ +T+N L+ G  +    +K  +L+  
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 256 MDE 258
           M++
Sbjct: 430 MEK 432



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 124/231 (53%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + + M  R +RP+   Y+ LI+G C    + +A +L + M+ +G   +V T+NTLI+ Y 
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               +E+   + S+M  KGI+  V+++ ++     +  ++  A+ + D+M + DVA    
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YN+ ID   ++G   +A  L   ++       I  Y+ L+ GLC+  +++ A EL  +L
Sbjct: 511 VYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              GL P+VV+YN +I   CN G  DKA +L  +M   G+ P   T +TL+
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLV 621



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 132/251 (52%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RL D M+  G +PN   Y+ L+ G C TG +D  R L   M  +  + +  TY+ L +G 
Sbjct: 250 RLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGL 309

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
            +T + +  L+L++E L KG+     T + L +GL +  +V  A ++F+ + H+ +   T
Sbjct: 310 TRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTT 369

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             YNT I+G C+   +  A  +F  ++          Y+ LI+GLCK+  +  A +L   
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + + G+ P+V T+N +I  +   GQ++K   +  DM+ KG+  + ++F +++    +N +
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 246 TSKVVELLHRM 256
             + V +L  M
Sbjct: 490 IPEAVAILDDM 500



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 128/257 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+  M + GV P+   ++TLID +   G++++   +   M   G   +V+++ +++
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 481

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             +CK   + E++ +  +M+ K + P    YN++     E    E AL L ++M++S V+
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVS 541

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN  + GLC++  I EA EL  TLR       + +Y+ +I   C  G  + A EL
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q + + G+ P + T + ++    + G++     L+  M  K V P+   +  ++   +R
Sbjct: 602 LQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661

Query: 243 NNETSKVVELLHRMDER 259
               SKV  L   M E+
Sbjct: 662 CENDSKVASLKKEMSEK 678



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 2/232 (0%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN--GCMHNVVTYNTLINGYCK 67
           L++  G RP+ F ++ ++      G++D A  +   M  +      +  +YN +I G  +
Sbjct: 147 LLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWR 206

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           +    ++L ++ EM+  G+ P  +TYNT+  G  +   +E   +L D+M H        T
Sbjct: 207 SGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVT 266

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN  + GLC+ G + E   L   +           YS L DGL + G+ +T   LF    
Sbjct: 267 YNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESL 326

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + G+M    T +I+++G C DG++ KA  +F  +   G+ P  V +NTL+ G
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLING 378



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 102/221 (46%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M Q+G++ +   + +++  FC  G+I  A  +   M       N   YN++I+ Y 
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           ++ D E++L L  +M + G+  ++VTYN L  GL    Q++ A +L   +++  +  +  
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YNT I   C  G   +A EL + +        +     L+  L   G++     L+Q +
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
               + P+   Y IM+  +       K   L  +M  KG+A
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIA 681


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 138/257 (53%), Gaps = 1/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EAS+L D  +  G+  N F Y++L+   C  G++  A  ++  M   G   +VV+YN +
Sbjct: 416 EEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+C+  D++ +  ++ EML KG++P ++TY+ L  G F+    E+A  L+D M+  ++
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    T N  I+GLCK G   E+ +  + L           Y+C+IDG  K G + +A  
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALA 594

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           ++  + ++G+ PNV TY  +I+GFC    MD A  +  +M+ KG+  +   +  L+ G  
Sbjct: 595 VYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFC 654

Query: 242 RNNETSKVVELLHRMDE 258
           R  +     +LL  + E
Sbjct: 655 RKGDMVNASQLLSELQE 671



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 140/285 (49%), Gaps = 35/285 (12%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L D M    + P+ F  + +I+G C  G    +++    +   G +   +TYN +I+G+ 
Sbjct: 525 LYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFV 584

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   V  +L +Y+EM   G+ P V TY  L +G  + + ++ ALK+ DEM++  +  + +
Sbjct: 585 KEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVT 644

Query: 127 TYNTFIDGLCKNGYIVEAAEL----------------------FRTLRVLKCEL------ 158
            Y   IDG C+ G +V A++L                      FR L+ ++  L      
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704

Query: 159 -------GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
                   ++ Y+ LI GL K GKL  A EL+  +   G+MP+++TY+++IHG CN GQ+
Sbjct: 705 INEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQL 764

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + A  +  DM+ K + P    +NTL+ G  +     +   L + M
Sbjct: 765 ENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 137/256 (53%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA ++   M+  G   N  V +TL+ G+C  G++D A ELF  M+ NG   N VTY  
Sbjct: 310 MLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAV 369

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK  +++++  +Y++M +K I PTV   N+L  G  +    E A KLFDE     
Sbjct: 370 IIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG 429

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A   TYN+ +  LCK G + EA  ++  +        + +Y+ +I G C+ G +++A 
Sbjct: 430 I-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSAN 488

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   GL PN++TY++++ G+   G  + A  L+  M  + +AP+  T N ++ G 
Sbjct: 489 GVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGL 548

Query: 241 IRNNETSKVVELLHRM 256
            +   TS+  + L ++
Sbjct: 549 CKAGRTSESQDRLKKL 564



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 123/233 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + GV PN F Y+ LI+GFC +  +D A ++   M   G   +V  Y  LI+G+C+  D
Sbjct: 599 MCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +  L SE+   G+ P  V Y+++  G  ++  +E AL L   M +  +  +   Y T
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTT 718

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I GL K G ++ A+EL+  +        +  YS LI GLC  G+LE A ++ + + R  
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + P V  YN +I G   +G + +A  L  +M  KG+ P+  T++ L+ G +++
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKD 831



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  + + M+++GVRP+   Y+ +I G C  G++D A  +FV M   G   N++TY+ 
Sbjct: 449 MSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSV 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GY K  D E +  LY  M  + I P+  T N + +GL +  +   +     ++    
Sbjct: 509 LMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEG 568

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
                 TYN  IDG  K G +  A  ++  +    C++G+      Y+ LI+G CK   +
Sbjct: 569 FIPTCMTYNCIIDGFVKEGSVNSALAVYTEM----CKIGVSPNVFTYTNLINGFCKSNNM 624

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A ++   +   G+  +V  Y  +I GFC  G M  A  L  +++  G++PN V ++++
Sbjct: 625 DLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G  +       + L  RM
Sbjct: 685 ISGFRKLQNMEAALHLHKRM 704



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 137/256 (53%), Gaps = 5/256 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLT-GEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           LL  M  +G  P+  +++ +I G C+  G++  A ++   M   G   NVV   TL+ GY
Sbjct: 281 LLREMRDKGWVPHEVIFTRVI-GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGY 339

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK  D++ +L L+ +M   GI P  VTY  +     +   ++ A +++++M++ D++   
Sbjct: 340 CKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTV 399

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETAWELFQ 184
              N+ I G  K     EA++LF     + C +  +  Y+ L+  LCK GK+  A  +++
Sbjct: 400 FNVNSLIRGYLKARSPEEASKLFD--EAVACGIANVFTYNSLLSWLCKEGKMSEACSIWE 457

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            + R G+ P+VV+YN MI G C  G MD A+ +F++M  KG+ PN +T++ LM G  +  
Sbjct: 458 KMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKG 517

Query: 245 ETSKVVELLHRMDERN 260
           +T     L  RM   N
Sbjct: 518 DTEYAFGLYDRMRGEN 533



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 114/211 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A +++D M  +G+  +  VY  LIDGFC  G++  A +L   +   G   N V Y++
Sbjct: 624 MDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSS 683

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+ K +++E +L+L+  M+++GI   +  Y TL  GL +  ++  A +L+ EM    
Sbjct: 684 MISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKG 743

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+  I GLC  G +  A ++   +        +  Y+ LI G  K G L+ A+
Sbjct: 744 IMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAF 803

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
            L   +   GL+P+  TY+I+++G   DG +
Sbjct: 804 RLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 2/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A    + +I++ + P   V +  +        I  AR+++  M   G   +  T + 
Sbjct: 170 INDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISV 229

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I    +   +EE+   + E  +KG+      Y+ +   + +      AL L  EM+   
Sbjct: 230 MIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKG 289

Query: 121 VAAETSTYNTFIDGLC-KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  +   I G+C K G ++EA ++   +      + +   + L+ G CK G L++A
Sbjct: 290 WVPHEVIFTRVI-GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSA 348

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ELF  +   G+ PN VTY ++I   C +G MDKA++++  M+ K ++P     N+L+ G
Sbjct: 349 LELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRG 408

Query: 240 CIRNNETSKVVELL 253
            ++     +  +L 
Sbjct: 409 YLKARSPEEASKLF 422



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 35/238 (14%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L+N Y KTK + ++++ ++ ++ K I P +   N     L + + +  A  ++++M 
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              V  + +T +  I    + G + EA   FR  +    EL   AYS +I+ +CK     
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276

Query: 178 TAWELFQSLPRVGLMP-----------------------------------NVVTYNIMI 202
            A  L + +   G +P                                   NVV    ++
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G+C  G +D A +LF  M   G+ PN VT+  ++  C +N    K  E+ ++M  ++
Sbjct: 337 KGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKD 394



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 9/258 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + + M  +GV+ +    S +I      G+++ A   F      G   +   Y+ +I
Sbjct: 207 EARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVI 266

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK  D   +L L  EM  KG  P  V +  +     +  ++  A+K+  EM      
Sbjct: 267 EAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKP 326

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKLET 178
                  T + G CK G +  A ELF  +     E GI      Y+ +I+  CK G ++ 
Sbjct: 327 MNVVVATTLMKGYCKQGDLDSALELFDKMN----ENGICPNNVTYAVIIEWCCKNGNMDK 382

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A+E++  +    + P V   N +I G+      ++A  LF +  A G+A N  T+N+L+ 
Sbjct: 383 AYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLS 441

Query: 239 GCIRNNETSKVVELLHRM 256
              +  + S+   +  +M
Sbjct: 442 WLCKEGKMSEACSIWEKM 459



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 77/145 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L   MI  G+  +  +Y+TLI G    G++  A EL+  M   G M +++TY+ 
Sbjct: 694 MEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSV 753

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C    +E +  +  +M  K + PTV  YNTL  G F+   ++ A +L +EM    
Sbjct: 754 LIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKG 813

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAA 145
           +  + +TY+  ++G  K+G +   A
Sbjct: 814 LVPDDTTYDILVNGKVKDGNLFSGA 838



 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 47/101 (46%)

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
           V  A L  + R L  E     ++ L++   K  ++  A + F SL    ++P +   NI 
Sbjct: 136 VVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIF 195

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +     +  + +A D++  M +KGV  +C T + ++   +R
Sbjct: 196 LSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMR 236



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/152 (16%), Positives = 69/152 (45%), Gaps = 6/152 (3%)

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLI 167
           +L +  +  D  +++  +N  ++   K   I +A + F +L    ++ C   +   +  +
Sbjct: 140 RLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPC---LTVMNIFL 196

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
             L K   +  A +++  +   G+  +  T ++MI     +G++++A   F + + KGV 
Sbjct: 197 SELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVE 256

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            +   ++ ++    +  ++   + LL  M ++
Sbjct: 257 LDARAYSIVIEAVCKKPDSVAALGLLREMRDK 288


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 130/257 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A RL   M  +G  PN + Y+ LI G C++G +  A  LF  M  +G   N VTYN L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN   + + ++ +  + + M   G  P +VTYN +  G   +   + A+ + + M     
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +A   TYNT I G C +G    A  +   +R   C+    +Y+ LI G CKI K+E+A+ 
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +   GL PN VTY  +I G+C D ++D A  L   M+  G  PN  T+N L+ G  
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 242 RNNETSKVVELLHRMDE 258
           + N  S   EL   M E
Sbjct: 577 KQNNFSGAEELCKVMIE 593



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 121/237 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A R+LDLM   G +P+ + Y+ LI GFC   +++ A  LF  M  +G   N VTY  LI
Sbjct: 478 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK + ++ + +L   M   G RP V TYN L HGL + +    A +L   M    + 
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDGLCKNG    A E+F  +    C   +  YS LI  L + GK+E A  L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F  L R GL+P+ +TY  MI  +   G+++ A +    M   G  P   T+  L+ G
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 120/231 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+LM + G  PN   Y+ +I G+C+ G+  +A  +  +M   G   N+VTYNT+I GYC
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
            + +   +L +   M   G +P   +Y  L  G  +I ++E A  LF+EM    +     
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   IDG CK+  +  A  L   ++   C   ++ Y+ LI GL K      A EL + +
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              G+ PNVVTY  MI G C +G    A ++F  M  +G  PN +T+++L+
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 129/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +++ M+QRG   N   Y+T+I G+C +G    A  +   M   GC  +  +Y  LI
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK   +E +  L++EM+  G+ P  VTY  L  G  +  +++ A  L + M+ S   
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I GL K      A EL + +        +  Y+ +IDGLCK G    A E+
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G +PN++TY+ +I     +G++++A +LF ++E  G+ P+ +T+  ++   I 
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 243 NNETSKVVELLHRM 256
           + +       L RM
Sbjct: 683 SGKVEHAFNFLGRM 696



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 131/256 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++  + +  + P+ F Y+++I G C   ++D A ++F  M   GC  N VTY+TLI
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C +  V E+ +L  EM+  GI PT  T       L ++   E A +LF +M++    
Sbjct: 293 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 352

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I GLC +G +  A  LF  +           Y+ LI+ L +  +++ A+ +
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R G  PN+VTYN MI G+C  G   KA  +  +M  +G + N VT+NT++ G   
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 243 NNETSKVVELLHRMDE 258
           +  T+  + +L  M +
Sbjct: 473 SGNTTSALRILDLMRD 488



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 126/249 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  GV+PN  +Y+ +I+  C  G +  A  +   +  +    +  TY ++I G+C+  D
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +L ++++M  +G  P  VTY+TL +GL +  +V  A  L  EM    +     T   
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I  LC  G   +A  LF  ++   CE  +  Y+ LI GLC  G L+ A  LF  + R G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PN VTYN +I+    + ++  A  +   M   G +PN VT+N ++ G     +  K +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 251 ELLHRMDER 259
            +++ M +R
Sbjct: 446 LVMNNMLQR 454



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M      LD++ Q G+R   F YS L+      G      + +  M   G   N++ YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK  +V ++  +  ++    + P   TY ++  G    H ++ AL++F++M    
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL--IDGLCKIGKLET 178
               T TY+T I+GLC +G + EA +L R + +L   L   A++C   I  LC +G  E 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREM-ILHGILPT-AHTCTGPIIALCDMGCYED 338

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           AW LF  +   G  PNV TY  +I G C  G +  A  LF  M   GV PN VT+N L+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ + M + G  PN   YSTLI+G C +G ++ A +L   M ++G +    T   
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I   C     E++  L+ +M +KG  P V TY  L  GL     ++ A+ LF  M    
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   T TYN  I+ L +N  I  A  +   +    C   I  Y+ +I G C +G  + A 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDG------------------------------- 209
            +  ++ + G   N+VTYN +I G+C+ G                               
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 210 ----QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
               +M+ A  LF +M   G+ PN VT+  L+ G  ++ +      LL  M
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556



 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 100/208 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L + M+  G+ PN   Y+ LIDG+C   ++D A  L   M  +GC  NV TYN 
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K  +   +  L   M+ +GI P VVTY  +  GL +      AL++F++M    
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ I  L + G + EA  LF  L           Y  +I+     GK+E A+
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND 208
                + + G  P + TY ++I G  N+
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNE 718



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 102/210 (48%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           +G    +  Y+ L+    +       ++ Y  MLS+G++P ++ YN + + L +   V  
Sbjct: 174 SGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVAD 233

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A  +  ++  S+++ +T TY + I G C+   +  A ++F  +    CE     YS LI+
Sbjct: 234 AETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLIN 293

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC  G++  A++L + +   G++P   T    I   C+ G  + A  LF+DM+ KG  P
Sbjct: 294 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 353

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N  T+  L+ G   +      + L HRM  
Sbjct: 354 NVYTYTALISGLCVSGLLKVAIGLFHRMSR 383



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 59/285 (20%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + + MI++G  PN   YS+LI      G+++ A  LF  ++ +G + + +TY  +I 
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------------------------ 99
            Y  +  VE + N    M+  G +PT+ TY  L  G                        
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 738

Query: 100 ----------------LFEIH-----QVEHAL--------------KLFDEMQHSDVAAE 124
                           L E+      QV++AL              +L   M    +  +
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
              YN+ +  L +   +  A  +F+ +    CE+ +  Y  LI  LC++ + + A   F+
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           ++      P+ V   ++I G   DG  D   +    ME +   P+
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903



 Score = 43.5 bits (101), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 80/227 (35%), Gaps = 28/227 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--INGCMH----- 53
           ++ A   L  MI+ G +P  + Y  LI G  L  E   A +   ++   +  C       
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKG--LKNEYLLADQRLAALPDVVPNCSFGYQTT 743

Query: 54  -------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
                              +V   N L++         E+  L   M+S+G+ P    YN
Sbjct: 744 DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           +L   L  +  V+ A+ +F  M         + Y   I  LC+     EA   F  + + 
Sbjct: 804 SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 863

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
                    + LIDGL + G  +   E    +     MP+   Y I+
Sbjct: 864 TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 130/257 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A RL   M  +G  PN + Y+ LI G C++G +  A  LF  M  +G   N VTYN L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN   + + ++ +  + + M   G  P +VTYN +  G   +   + A+ + + M     
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +A   TYNT I G C +G    A  +   +R   C+    +Y+ LI G CKI K+E+A+ 
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +   GL PN VTY  +I G+C D ++D A  L   M+  G  PN  T+N L+ G  
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 242 RNNETSKVVELLHRMDE 258
           + N  S   EL   M E
Sbjct: 577 KQNNFSGAEELCKVMIE 593



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 121/237 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A R+LDLM   G +P+ + Y+ LI GFC   +++ A  LF  M  +G   N VTY  LI
Sbjct: 478 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK + ++ + +L   M   G RP V TYN L HGL + +    A +L   M    + 
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDGLCKNG    A E+F  +    C   +  YS LI  L + GK+E A  L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F  L R GL+P+ +TY  MI  +   G+++ A +    M   G  P   T+  L+ G
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 120/231 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+LM + G  PN   Y+ +I G+C+ G+  +A  +  +M   G   N+VTYNT+I GYC
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
            + +   +L +   M   G +P   +Y  L  G  +I ++E A  LF+EM    +     
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   IDG CK+  +  A  L   ++   C   ++ Y+ LI GL K      A EL + +
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              G+ PNVVTY  MI G C +G    A ++F  M  +G  PN +T+++L+
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 129/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +++ M+QRG   N   Y+T+I G+C +G    A  +   M   GC  +  +Y  LI
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK   +E +  L++EM+  G+ P  VTY  L  G  +  +++ A  L + M+ S   
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I GL K      A EL + +        +  Y+ +IDGLCK G    A E+
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G +PN++TY+ +I     +G++++A +LF ++E  G+ P+ +T+  ++   I 
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 243 NNETSKVVELLHRM 256
           + +       L RM
Sbjct: 683 SGKVEHAFNFLGRM 696



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 131/256 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++  + +  + P+ F Y+++I G C   ++D A ++F  M   GC  N VTY+TLI
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C +  V E+ +L  EM+  GI PT  T       L ++   E A +LF +M++    
Sbjct: 293 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 352

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I GLC +G +  A  LF  +           Y+ LI+ L +  +++ A+ +
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R G  PN+VTYN MI G+C  G   KA  +  +M  +G + N VT+NT++ G   
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 243 NNETSKVVELLHRMDE 258
           +  T+  + +L  M +
Sbjct: 473 SGNTTSALRILDLMRD 488



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 126/249 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  GV+PN  +Y+ +I+  C  G +  A  +   +  +    +  TY ++I G+C+  D
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +L ++++M  +G  P  VTY+TL +GL +  +V  A  L  EM    +     T   
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I  LC  G   +A  LF  ++   CE  +  Y+ LI GLC  G L+ A  LF  + R G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PN VTYN +I+    + ++  A  +   M   G +PN VT+N ++ G     +  K +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 251 ELLHRMDER 259
            +++ M +R
Sbjct: 446 LVMNNMLQR 454



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M      LD++ Q G+R   F YS L+      G      + +  M   G   N++ YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK  +V ++  +  ++    + P   TY ++  G    H ++ AL++F++M    
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL--IDGLCKIGKLET 178
               T TY+T I+GLC +G + EA +L R + +L   L   A++C   I  LC +G  E 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREM-ILHGILPT-AHTCTGPIIALCDMGCYED 338

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           AW LF  +   G  PNV TY  +I G C  G +  A  LF  M   GV PN VT+N L+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ + M + G  PN   YSTLI+G C +G ++ A +L   M ++G +    T   
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I   C     E++  L+ +M +KG  P V TY  L  GL     ++ A+ LF  M    
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   T TYN  I+ L +N  I  A  +   +    C   I  Y+ +I G C +G  + A 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDG------------------------------- 209
            +  ++ + G   N+VTYN +I G+C+ G                               
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 210 ----QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
               +M+ A  LF +M   G+ PN VT+  L+ G  ++ +      LL  M
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 100/208 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L + M+  G+ PN   Y+ LIDG+C   ++D A  L   M  +GC  NV TYN 
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K  +   +  L   M+ +GI P VVTY  +  GL +      AL++F++M    
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ I  L + G + EA  LF  L           Y  +I+     GK+E A+
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND 208
                + + G  P + TY ++I G  N+
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNE 718



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 102/210 (48%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           +G    +  Y+ L+    +       ++ Y  MLS+G++P ++ YN + + L +   V  
Sbjct: 174 SGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVAD 233

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A  +  ++  S+++ +T TY + I G C+   +  A ++F  +    CE     YS LI+
Sbjct: 234 AETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLIN 293

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC  G++  A++L + +   G++P   T    I   C+ G  + A  LF+DM+ KG  P
Sbjct: 294 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 353

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N  T+  L+ G   +      + L HRM  
Sbjct: 354 NVYTYTALISGLCVSGLLKVAIGLFHRMSR 383



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 59/285 (20%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + + MI++G  PN   YS+LI      G+++ A  LF  ++ +G + + +TY  +I 
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------------------------ 99
            Y  +  VE + N    M+  G +PT+ TY  L  G                        
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 738

Query: 100 ----------------LFEIH-----QVEHAL--------------KLFDEMQHSDVAAE 124
                           L E+      QV++AL              +L   M    +  +
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
              YN+ +  L +   +  A  +F+ +    CE+ +  Y  LI  LC++ + + A   F+
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           ++      P+ V   ++I G   DG  D   +    ME +   P+
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903



 Score = 43.5 bits (101), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 57/148 (38%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V   N L++         E+  L   M+S+G+ P    YN+L   L  +  V+ A+ +F
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M         + Y   I  LC+     EA   F  + +          + LIDGL + 
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 882

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIM 201
           G  +   E    +     MP+   Y I+
Sbjct: 883 GYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 135/252 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M +RG+ PN  V +TLID  C  G++    EL   M   G   ++V YN 
Sbjct: 328 IQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNA 387

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG+C+ +D++ + ++  EM   G++P  VTY TL  G  +  +++ A+++  EM    
Sbjct: 388 LVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEG 447

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA +  TY   I GL K G  V+A  +   +     +     Y+ +ID  CK G ++T +
Sbjct: 448 VALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGF 507

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +  + +   G  P +VTYN++++GFC+ GQM  A  L   M   GV PN +T+N L+ G 
Sbjct: 508 KHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGH 567

Query: 241 IRNNETSKVVEL 252
            ++ +     EL
Sbjct: 568 CKHGKVRDTEEL 579



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 127/248 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  GV P A  ++ L+     +G++  AR +F  M   G    VVT+NTL++G CK  D
Sbjct: 233 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 292

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +  L   M   GI P V TY     GL +  +++ A+++F+EM    +   T    T
Sbjct: 293 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTT 352

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK G +    EL   +     +  + AY+ L++G C++  ++ A ++ + + + G
Sbjct: 353 LIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDG 412

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ VTY  +I G C +G++D A ++  +M  +GVA + VT+  L+ G  +   +    
Sbjct: 413 LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAE 472

Query: 251 ELLHRMDE 258
            +L  M E
Sbjct: 473 RILCEMME 480



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 47/297 (15%)

Query: 2   DEASRLLDLMIQRGVRPN-AFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           D   RLL L++      + A + S +   +   G +     L +     G    +  ++ 
Sbjct: 156 DSPPRLLPLLVSAASTDDPAPLVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSD 215

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N   +   V E+   Y  +L  G+ P    +N L   +    ++  A  +FDEM    
Sbjct: 216 LMN---RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRG 272

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
           V     T+NT + G+CK   +  A      LR L  + GI      Y   I GLCK G++
Sbjct: 273 VQPTVVTFNTLMSGMCKASDLNNA----NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRI 328

Query: 177 ETAWELFQSLPRVGLMPN-----------------------------------VVTYNIM 201
           + A E+F+ +   GL PN                                   +V YN +
Sbjct: 329 QDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNAL 388

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           ++GFC    M  A+D+  +M   G+ P+ VT+ TL+ GC +  E    +E+   M +
Sbjct: 389 VNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSD 445



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 38/207 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A+ +++ M + G++P+   Y+TLIDG C  GE+D A E+   M   G   + VTY  
Sbjct: 398 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 457

Query: 61  LING-----------------------------------YCKTKDVEESLNLYSEMLSKG 85
           LI+G                                   +CK  DV+       EM +KG
Sbjct: 458 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 517

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P +VTYN + +G   + Q+++A  L + M +  V     TYN  +DG CK+G + +  
Sbjct: 518 KNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE 577

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCK 172
           EL ++ + +  + G+  Y+ LI+   K
Sbjct: 578 EL-KSAKGMVSDFGV--YTSLINEFVK 601



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 3/178 (1%)

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           L +GIR  +  ++ L +    +  V  A   +  +  + V  E   +N  +  + ++G +
Sbjct: 202 LRRGIRVPMPAWSDLMN---RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKL 258

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
             A  +F  +     +  +  ++ L+ G+CK   L  A  L   + + G+ P+V TY   
Sbjct: 259 ASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAF 318

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           I G C  G++  A ++F +M  +G+ PN V   TL+    +  + +  +EL   M  R
Sbjct: 319 IQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATR 376


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 127/238 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A R+L+LM   G +P+ + Y+ LI GFC   +++ A  +F  M   G   N VTY  L
Sbjct: 487 DVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTAL 546

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYCK + ++ +  +   M   G RP V TYN L HGL + +    A +L   M    +
Sbjct: 547 ISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKI 606

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TY+T I+GLC NG I  A E+F  +    C   +  YS LI  L + G++E A E
Sbjct: 607 SPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEE 666

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +F  L + GL+P+ VTY  MI      G++D+A D   +M   G  P   T++ L+ G
Sbjct: 667 MFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 136/255 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  +L  M++    P    Y+ +I G+C +G+ D A  +   M  NGC  +  +Y  L
Sbjct: 452 EKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTEL 511

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK   +E +  +++EM+ +G+ P  VTY  L  G  +  +++ A ++ + M+ S  
Sbjct: 512 ISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGC 571

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  I GL K      A EL + +   K    +  YS +I+GLC  G +  A E
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALE 631

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  + + G +PN+ TY+ +I     +G++++A ++F +++ +G+ P+ VT+  ++  C+
Sbjct: 632 MFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCV 691

Query: 242 RNNETSKVVELLHRM 256
            + +  +  + L  M
Sbjct: 692 MSGKVDRAFDFLGEM 706



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 32/269 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +++ + + G++P+ F Y+++I G+C   ++D A E+F  MD  GC  N  TY+TLI
Sbjct: 246 DAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLI 305

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK----------- 111
           NG C +  V E+L+  SEM   G+ PTV T+      L ++ ++E A K           
Sbjct: 306 NGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCK 365

Query: 112 ---------------------LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
                                LF  M    V   T TYN  ++ L +N  I  A  +F  
Sbjct: 366 PNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNM 425

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C     +Y+ LI G C IG  E A  +  ++ +    P +VTYNI+I G+C+ G 
Sbjct: 426 MGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGD 485

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            D A  +   M+A G  P+  ++  L+ G
Sbjct: 486 TDVAIRVLELMKANGCQPDEWSYTELISG 514



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 5/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR-ARELFVSMDINGCMHNVVTYN 59
           +++A ++   M ++G +PN + Y++LI G      + R A  LF  M  +G + N VTYN
Sbjct: 349 IEDAWKIFIDMKKKGCKPNVYTYTSLISG----QRVSRMAIGLFHRMSRDGVVPNTVTYN 404

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            L+N   +  +++ +L +++ M   G  P   +YN L  G   I   E A+ +   M   
Sbjct: 405 ALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKG 464

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TYN  I G C +G    A  +   ++   C+    +Y+ LI G CKI K+E A
Sbjct: 465 RPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELA 524

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +F  +   GL PN VTY  +I G+C D ++D A  +   M+  G  PN  T+N L+ G
Sbjct: 525 SGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHG 584

Query: 240 CIRNNETSKVVELLHRMDE 258
             + N  S   EL   M E
Sbjct: 585 LTKQNNFSGAEELCKVMLE 603



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 129/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + ++M + G  PN   Y+ LI G+C  G+ ++A  +  +M        +VTYN 
Sbjct: 416 IDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNI 475

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYC + D + ++ +   M + G +P   +Y  L  G  +I ++E A  +F+EM    
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   I G CK+  +  AA +   ++   C   ++ Y+ LI GL K      A 
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 595

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + +    + P+VVTY+ +I+G CN+G +  A ++F  M   G  PN  T+++L+   
Sbjct: 596 ELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655

Query: 241 IRNNETSKVVELLHRMDER 259
            +     +  E+   + ++
Sbjct: 656 GQEGRVEEAEEMFSELKKQ 674



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 127/246 (51%), Gaps = 3/246 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G++PN  +Y+++I+  C  G +  A  +   +  +G   +  TY ++I GYC+ +D
Sbjct: 219 ILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRD 278

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +  +++ M  +G  P   TY+TL +GL    +V  AL    EM    V     T+  
Sbjct: 279 LDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTA 338

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I  LC  G I +A ++F  ++   C+  +  Y+ LI G  ++ ++  A  LF  + R G
Sbjct: 339 PIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRM--AIGLFHRMSRDG 395

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++PN VTYN +++    + ++D A  +F  M   G  PN  ++N L+ G     +T K +
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455

Query: 251 ELLHRM 256
            +L  M
Sbjct: 456 SMLTNM 461



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 11/260 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTL---IDGFCLTGEI-DRARELFVSMDINGCMHNVV 56
           M +A   LD+  QRG +   F Y+TL   ++   +T  + DR  ++       G   N++
Sbjct: 174 MTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILR----EGLQPNLL 229

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            YN++IN  CK  +V ++ ++ +++   G++P   TY ++  G      ++ A ++F+ M
Sbjct: 230 IYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM 289

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                    +TY+T I+GLC +G + EA +    +        +  ++  I  LC +G++
Sbjct: 290 DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRI 349

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           E AW++F  + + G  PNV TY  +I G         A  LF  M   GV PN VT+N L
Sbjct: 350 EDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNAL 406

Query: 237 MLGCIRNNETSKVVELLHRM 256
           M   + N E    + + + M
Sbjct: 407 MNVLMENMEIDSALIVFNMM 426



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 126/285 (44%), Gaps = 30/285 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+R+L+ M + G RPN   Y+ LI G         A EL   M       +VVTY+T
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYST 615

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C    +  +L ++++M+  G  P + TY++L   L +  +VE A ++F E++   
Sbjct: 616 VINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG 675

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   I+    +G +  A +    +    C+  ++ Y  LI GL    + E  +
Sbjct: 676 LIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL----QNEMVY 731

Query: 181 ELFQSLPRVG---------LMPNVVT-----------------YNIMIHGFCNDGQMDKA 214
               +LP            +  +V++                 Y+ ++      G+  +A
Sbjct: 732 HKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEA 791

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ++L+  M ++   PN  T+   ++  +R  +    +++   M ++
Sbjct: 792 NNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQ 836



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 39/229 (17%)

Query: 66  CKTK-DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           C  K ++ ++LN       +G +  + TY TL   L +++     +  + ++    +   
Sbjct: 168 CSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227

Query: 125 TSTYNTFIDGLCKNGYIVEAA-----------------------------------ELFR 149
              YN+ I+ LCK+G + +A                                    E+F 
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN 287

Query: 150 TLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
            +    CE     YS LI+GLC  G++  A +    + R G++P V T+   I   C+ G
Sbjct: 288 RMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMG 347

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +++ A  +F+DM+ KG  PN  T+ +L+ G      +   + L HRM  
Sbjct: 348 RIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSR 393



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 121/318 (38%), Gaps = 92/318 (28%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L  +M++  + P+   YST+I+G C  G I  A E+F  M  +GC+ N+ TY++LI 
Sbjct: 594 AEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQ 653

Query: 64  GYCKTKDVEESLNLYSE-----------------------------------MLSKGIRP 88
              +   VEE+  ++SE                                   M++ G +P
Sbjct: 654 ALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQP 713

Query: 89  TVVTYNTL---------FHGLFEIHQVEHALKLFDEMQHSDVAAETST------------ 127
           T+ TY+ L         +H L  +          D++ + DV +  S+            
Sbjct: 714 TLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQ 773

Query: 128 -YNTFIDGLCKNGYIVEAAELFRT--------------------LRVLK----------- 155
            Y+  +  L ++G   EA  L+R+                    LR LK           
Sbjct: 774 LYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHM 833

Query: 156 ----CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
               CEL +  Y  LI  LC++ + + A  +F+ +    L  + + + I+I+G    G  
Sbjct: 834 SDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYK 893

Query: 212 DKAHDLFLDMEAKGVAPN 229
           D   +    ME     P+
Sbjct: 894 DLCMEFLHIMETNRRNPS 911


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 134/257 (52%), Gaps = 6/257 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A RL   ++     PNA  Y+ LI GFC  G++ +A  +F  M  +G + N  T NTL
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G C+   +  +L L+ EM +    PT  ++N L  G F       A++ F EM+ S V
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF---MAGRAIEFFKEMKASGV 123

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +Y+  +  L  +G + EA  LF     + C   I  Y+ L+DG CKIG+   A  
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + + + G  PNV TY+I+I+ +C   ++++A ++F+ M      PN VTFNTL+ G  
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 240

Query: 242 RNNETSKVVELLHRMDE 258
           +       ++L   M++
Sbjct: 241 KAGMLEDAIKLFAEMEK 257



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 127/250 (50%), Gaps = 12/250 (4%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M   GV P+   Y  L+     +G +  A  LF +M    C  +++TYN L++GYCK   
Sbjct: 118 MKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQ 174

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             E+ +L  E+L  G  P V TY+ + +   ++ +VE A ++F +M  S+      T+NT
Sbjct: 175 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 234

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI-GKLETAWELFQSLPRV 189
            I G CK G + +A +LF  +  + C+  I  Y+ LID LCK  G + TA +LF  L   
Sbjct: 235 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 294

Query: 190 GLMPNVVTYNIMIHGF---CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
           GL P +VTYN +I GF    NDG       L   M A+G  P+ +T+N L+ G    N  
Sbjct: 295 GLTPTIVTYNSLIQGFSERANDGL-----RLLCHMHAEGCKPDVITYNCLISGLCSANRV 349

Query: 247 SKVVELLHRM 256
                L + M
Sbjct: 350 EDAQRLFNGM 359



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 136/255 (53%), Gaps = 10/255 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L+  +++ G  PN F YS +I+ +C   +++ A E+F+ M  + C+ N VT+NTLI
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 236

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHSDV 121
            G+CK   +E+++ L++EM   G + T+VTYNTL   L +    V  A+ LF++++ + +
Sbjct: 237 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGL 296

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN+ I G  +     +   L   +    C+  +  Y+CLI GLC   ++E A  
Sbjct: 297 TPTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQR 354

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +      PNV T+N +I G C   ++++A ++   M     AP+  TFNT++L   
Sbjct: 355 LFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFC 407

Query: 242 RNNETSKVVELLHRM 256
           +        E++  M
Sbjct: 408 KAGAMHDAREVMKDM 422



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 10/240 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +   MI+    PNA  ++TLI GFC  G ++ A +LF  M+  GC   +VTYNT
Sbjct: 210 VEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNT 269

Query: 61  LINGYCKTK-DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+  CK +  V  +++L++++   G+ PT+VTYN+L  G  E  +    L+L   M   
Sbjct: 270 LIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAE 327

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TYN  I GLC    + +A  LF     + C   +  ++ LI GLC   K+E A
Sbjct: 328 GCKPDVITYNCLISGLCSANRVEDAQRLFNG---MACAPNVTTFNFLIRGLCAQKKVEEA 384

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   +      P++ T+N +I  FC  G M  A ++  DM   G  PN  T   L  G
Sbjct: 385 RNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHG 440



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 7/258 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  +   M   G+ PNA   +TL+ G C  G++  A +LF  M     +    ++N 
Sbjct: 41  MHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNI 100

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+        ++  + EM + G+ P + +Y+ L   L +  ++  A  LF  M  S 
Sbjct: 101 LLRGFFMAG---RAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSP 157

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  +DG CK G   EA  L + +     E  +  YS +I+  CK+ K+E AW
Sbjct: 158 ---DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAW 214

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
           E+F  +     +PN VT+N +I GFC  G ++ A  LF +ME  G     VT+NTL+   
Sbjct: 215 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 274

Query: 240 CIRNNETSKVVELLHRMD 257
           C +       V+L ++++
Sbjct: 275 CKKRGGVYTAVDLFNKLE 292



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 6/224 (2%)

Query: 37  DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           D+A  LF  +       N  TYN LI G+CK   + ++++++S+M S G+ P   T NTL
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
             GL EI Q+  ALKLF EMQ       ++++N  + G    G    A E F+ ++    
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGV 123

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           E  +E+Y  L+  L   G++  A  LF ++      P+++TYN+++ G+C  GQ  +A  
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           L  ++   G  PN  T++ ++    + ++  +  E+  +M E N
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN 224



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%)

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           K + A  LF+ +      PN  TYN++I GFC  GQM +A  +F DM++ G+ PN  T N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 235 TLMLGCIRNNETSKVVELLHRMD 257
           TL+LG     + S  ++L   M 
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQ 87



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A RL + M      PN   ++ LI G C   +++ AR +   M       ++ T+NT
Sbjct: 349 VEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAP----DMTTFNT 401

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           +I  +CK   + ++  +  +ML  G  P   T   L HG+
Sbjct: 402 IILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 130/257 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A RL   M  +G  PN + Y+ LI G C++G +  A  LF  M  +G   N VTYN L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN   + + ++ +  + + M   G  P +VTYN +  G   +   + A+ + + M     
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +A   TYNT I G C +G    A  +   +R   C+    +Y+ LI G CKI K+E+A+ 
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +   GL PN VTY  +I G+C D ++D A  L   M+  G  PN  T+N L+ G  
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 242 RNNETSKVVELLHRMDE 258
           + N  S   EL   M E
Sbjct: 577 KQNNFSGAEELCKVMIE 593



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 121/237 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A R+LDLM   G +P+ + Y+ LI GFC   +++ A  LF  M  +G   N VTY  LI
Sbjct: 478 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK + ++ + +L   M   G RP V TYN L HGL + +    A +L   M    + 
Sbjct: 538 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 597

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDGLCKNG    A E+F  +    C   +  YS LI  L + GK+E A  L
Sbjct: 598 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 657

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F  L R GL+P+ +TY  MI  +   G+++ A +    M   G  P   T+  L+ G
Sbjct: 658 FAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 120/231 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+LM + G  PN   Y+ +I G+C+ G+  +A  +  +M   G   N+VTYNT+I GYC
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
            + +   +L +   M   G +P   +Y  L  G  +I ++E A  LF+EM    +     
Sbjct: 472 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 531

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   IDG CK+  +  A  L   ++   C   ++ Y+ LI GL K      A EL + +
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              G+ PNVVTY  MI G C +G    A ++F  M  +G  PN +T+++L+
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 129/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +++ M+QRG   N   Y+T+I G+C +G    A  +   M   GC  +  +Y  LI
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK   +E +  L++EM+  G+ P  VTY  L  G  +  +++ A  L + M+ S   
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I GL K      A EL + +        +  Y+ +IDGLCK G    A E+
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G +PN++TY+ +I     +G++++A +LF ++E  G+ P+ +T+  ++   I 
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 243 NNETSKVVELLHRM 256
           + +       L RM
Sbjct: 683 SGKVEHAFNFLGRM 696



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 131/256 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++  + +  + P+ F Y+++I G C   ++D A ++F  M   GC  N VTY+TLI
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C +  V E+ +L  EM+  GI PT  T       L ++   E A +LF +M++    
Sbjct: 293 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 352

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I GLC +G +  A  LF  +           Y+ LI+ L +  +++ A+ +
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R G  PN+VTYN MI G+C  G   KA  +  +M  +G + N VT+NT++ G   
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472

Query: 243 NNETSKVVELLHRMDE 258
           +  T+  + +L  M +
Sbjct: 473 SGNTTSALRILDLMRD 488



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 126/249 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  GV+PN  +Y+ +I+  C  G +  A  +   +  +    +  TY ++I G+C+  D
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +L ++++M  +G  P  VTY+TL +GL +  +V  A  L  EM    +     T   
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I  LC  G   +A  LF  ++   CE  +  Y+ LI GLC  G L+ A  LF  + R G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PN VTYN +I+    + ++  A  +   M   G +PN VT+N ++ G     +  K +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 251 ELLHRMDER 259
            +++ M +R
Sbjct: 446 LVMNNMLQR 454



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M      LD++ Q G+R   F YS L+      G      + +  M   G   N++ YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK  +V ++  +  ++    + P   TY ++  G    H ++ AL++F++M    
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL--IDGLCKIGKLET 178
               T TY+T I+GLC +G + EA +L R + +L   L   A++C   I  LC +G  E 
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREM-ILHGILPT-AHTCTGPIIALCDMGCYED 338

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           AW LF  +   G  PNV TY  +I G C  G +  A  LF  M   GV PN VT+N L+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALI 397



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ + M + G  PN   YSTLI+G C +G ++ A +L   M ++G +    T   
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I   C     E++  L+ +M +KG  P V TY  L  GL     ++ A+ LF  M    
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   T TYN  I+ L +N  I  A  +   +    C   I  Y+ +I G C +G  + A 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDG------------------------------- 209
            +  ++ + G   N+VTYN +I G+C+ G                               
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 210 ----QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
               +M+ A  LF +M   G+ PN VT+  L+ G  ++ +      LL  M
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 100/208 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L + M+  G+ PN   Y+ LIDG+C   ++D A  L   M  +GC  NV TYN 
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K  +   +  L   M+ +GI P VVTY  +  GL +      AL++F++M    
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ I  L + G + EA  LF  L           Y  +I+     GK+E A+
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND 208
                + + G  P + TY ++I G  N+
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNE 718



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 102/210 (48%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           +G    +  Y+ L+    +       ++ Y  MLS+G++P ++ YN + + L +   V  
Sbjct: 174 SGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVAD 233

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A  +  ++  S+++ +T TY + I G C+   +  A ++F  +    CE     YS LI+
Sbjct: 234 AETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLIN 293

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC  G++  A++L + +   G++P   T    I   C+ G  + A  LF+DM+ KG  P
Sbjct: 294 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 353

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N  T+  L+ G   +      + L HRM  
Sbjct: 354 NVYTYTALISGLCVSGILKVAIGLFHRMSR 383



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 59/285 (20%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + + MI++G  PN   YS+LI      G+++ A  LF  ++ +G + + +TY  +I 
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------------------------ 99
            Y  +  VE + N    M+  G +PT+ TY  L  G                        
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 738

Query: 100 ----------------LFEIH-----QVEHAL--------------KLFDEMQHSDVAAE 124
                           L E+      QV++AL              +L   M    +  +
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
              YN+ +  L +   +  A  +F+ +    CE+ +  Y  LI  LC++ + + A   F+
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           ++      P+ V   ++I G   DG  D   +    ME +   P+
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 57/148 (38%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           +V   N L++         E+  L   M+S+G+ P    YN+L   L  +  V+ A+ +F
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             M         + Y   I  LC+     EA   F  + +          + LIDGL + 
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 882

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIM 201
           G  +   E    +     MP+   Y I+
Sbjct: 883 GYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|255661034|gb|ACU25686.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 376

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + +LM + G   ++  ++ LIDGFC  G I+++  +    +  G + N   Y+ 
Sbjct: 75  VDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEIAEEKGGVLNAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C+   ++++ ++ + M+  G +P    YN L +G     +   A+++F EM  +D
Sbjct: 135 MINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFYDAIRVFQEMGSTD 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCK     EA +L + +     +  +  YS LI GLC+  K+E A 
Sbjct: 195 CSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQGHKVEMAI 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   GL P+V  +NI+IHG C+ G+   A  L+ DM     APN VT NTLM G 
Sbjct: 255 QLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 129/232 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+ +L+ MI+ G +PNA VY+ LI+GF    +   A  +F  M    C   +VTYNT
Sbjct: 145 LDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFYDAIRVFQEMGSTDCSPTIVTYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ +L  EML KG +P V+TY+ L  GL + H+VE A++L++++    
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQGHKVEMAIQLWNQVISKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   +N  I GLC  G    A  L+  +    C   +  ++ L++G  K G +  A 
Sbjct: 265 LKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++V+YNI + G C+  ++  A+    D  A  +AP  +T
Sbjct: 325 VIWARILRNGLQPDIVSYNITLKGLCSCNRISFANLFLXDALANAIAPTXIT 376



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 128/247 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++ R+L++  ++G   NAF YS +I+G C   ++D+A  +   M  NG   N   YN 
Sbjct: 110 INKSLRVLEIAEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNI 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+       +++ ++ EM S    PT+VTYNTL +GL +  +   A  L  EM    
Sbjct: 170 LINGFVGASKFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  I GLC+   +  A +L+  +     +  ++ ++ LI GLC +GK + A 
Sbjct: 230 WKPCVITYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+VT+N ++ GF  DG +  A  ++  +   G+ P+ V++N  + G 
Sbjct: 290 MLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGL 349

Query: 241 IRNNETS 247
              N  S
Sbjct: 350 CSCNRIS 356



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C + +ID A  ++  M  +    + V YN ++NGY +   +++   L+  M ++G +  V
Sbjct: 1   CDSEDIDGAERVYKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELWELMGTEGGQ-NV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +++N +  GLF   +V+ A+ +++ M+ S    +++T+   IDG CKNGYI ++  +   
Sbjct: 60  ISFNIMMRGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDGFCKNGYINKSLRVLEI 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLC+  KL+ A  +   + + G  PN   YNI+I+GF    +
Sbjct: 120 AEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              A  +F +M +   +P  VT+NTL+ G  +    ++  +L+  M E+
Sbjct: 180 FYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEK 228


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 134/259 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +L D M+      + +    L+ G CL G ++   +L  +    GC+ +VV YN L
Sbjct: 186 DDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVL 245

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC+  D+   L L  EM +KG  PT+VTY +L + L +   +E    LF EM+   +
Sbjct: 246 IDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGL 305

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +     YN+ ID LCK     +A  + + +    C+  I  ++ LI GLC  G +  A  
Sbjct: 306 SPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEH 365

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             +   R  L PN ++Y  +IHGFC  G++  A DL ++M  +G  P+ VTF  L+ G +
Sbjct: 366 FLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLV 425

Query: 242 RNNETSKVVELLHRMDERN 260
              + S+ + +  +M ER 
Sbjct: 426 VAGKVSEALIVREKMTERQ 444



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 114/234 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS LL  M+ RG  P+   +  LI G  + G++  A  +   M       +V  YN LI+
Sbjct: 398 ASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 457

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   +  + N+  EML K ++P    Y TL  G      +  A K+F+ M+H  V  
Sbjct: 458 GLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP 517

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  + N  I G C+ G + EA      +R + C      Y+ +I G  K G L  A    
Sbjct: 518 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 577

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             + +    PNVVTY+ +I+G+C  G  D A  LF +M+A+ ++PN VT+  L+
Sbjct: 578 CDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILI 631



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 4/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L++     G  P+   Y+ LIDG+C  G++ R   L   M+  G +  +VTY +
Sbjct: 220 VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGS 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN   K  D+E+  +L+ EM  +G+ P V  YN++   L +      A+ +  +M  S 
Sbjct: 280 LINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASG 339

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLET 178
              +  T+NT I GLC  G++ +A    R    ++ EL     +Y+ LI G C  G+L  
Sbjct: 340 CDPDIITFNTLITGLCHEGHVRKAEHFLR--EAIRRELNPNQLSYTPLIHGFCMRGELMA 397

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +L   +   G  P+VVT+  +IHG    G++ +A  +   M  + V P+   +N L+ 
Sbjct: 398 ASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 457

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G  + +       +L  M E+N
Sbjct: 458 GLCKKHMLPAAKNILEEMLEKN 479



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 120/258 (46%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +L  M   G  P+   ++TLI G C  G + +A              N ++Y  LI
Sbjct: 327 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 386

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+C   ++  + +L  EM+ +G  P VVT+  L HGL    +V  AL + ++M    V 
Sbjct: 387 HGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 446

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + + YN  I GLCK   +  A  +   +     +     Y+ LIDG  +   L  A ++
Sbjct: 447 PDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 506

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+ +   G+ P++V+ N MI G+C  G M +A     +M   G  P+  T+ T++ G  +
Sbjct: 507 FEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 566

Query: 243 NNETSKVVELLHRMDERN 260
               +  +  L  M +R 
Sbjct: 567 QGNLNGALRWLCDMIKRK 584



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 15/225 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA   +  M + G  P+ F Y+T+I G+   G ++ A      M    C  NVVTY++
Sbjct: 535 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 594

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ--- 117
           LINGYCKT D + +  L++ M ++ + P VVTY  L   LF+  +V  A   F+ M    
Sbjct: 595 LINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 654

Query: 118 --------HSDVAAETSTYNTFIDGLCKNGYIVEAAE-LFRTLRVLKCELGI---EAYSC 165
                   H  V   TS     I+ +C N   V   + L    + L  ++G     AY+ 
Sbjct: 655 CSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNA 714

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +I  LC+   L  A +    + + G +PN +T+  +++GFC+ G+
Sbjct: 715 IIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 15/254 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++ + M  +GVRP+    + +I G+C  G +  A     +M   GC+ +  TY T
Sbjct: 500 LGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 559

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY K  ++  +L    +M+ +  +P VVTY++L +G  +    + A  LF  MQ   
Sbjct: 560 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 619

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-----------IEAYSCLIDG 169
           ++    TY   I  L K   ++ A   F T+ +  C                   C+I+ 
Sbjct: 620 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINS 679

Query: 170 LC----KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +C    ++   +    +F+ L      P    YN +I   C    + +A D    M  KG
Sbjct: 680 ICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKG 739

Query: 226 VAPNCVTFNTLMLG 239
             PN +TF +L+ G
Sbjct: 740 YVPNPITFLSLLYG 753



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 1/240 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P    +STL+     +   D   +   SM + G          L+  Y     + ++ ++
Sbjct: 96  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDM 155

Query: 78  YSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
              +  + G  P V   N L   L E  + + A KL+DEM   D  A+  +    + GLC
Sbjct: 156 CERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLC 215

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
             G + E  +L        C   +  Y+ LIDG C+ G +     L   +   G +P +V
Sbjct: 216 LEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLV 275

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           TY  +I+     G ++K   LFL+M  +G++PN   +N+++    +    ++ + +L +M
Sbjct: 276 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 335


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 130/245 (53%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +  G  PN  VY+ LIDG+C  GE++ A ++F  MD N C  NV TY  LI+G CK+  V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E ++ L+S M+  G+ P VVTY  L  G      ++ A +L   M+ + +     T++  
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           ID LCK   + EA     +L     ++    Y+ LIDGLCK GK++ A EL Q +   G 
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +P+  +Y+ +I G C   ++ +A  +  DM  KG+  + VT+  ++   +R   +    +
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 252 LLHRM 256
           +  +M
Sbjct: 444 IFDKM 448



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 119/234 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A + L  ++  G+ P+++ Y++ + G+C  G +  A  +FV M + GC+    TY  L++
Sbjct: 91  AKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLH 150

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G      V E++ ++  M +    P    Y T+ HGL E  + E A  L +E   +    
Sbjct: 151 GLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEP 210

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YN  IDG C  G +  A ++F  +   +C   +  Y+ LI GLCK GK+E A  LF
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             +   GL PNVVTY  +I G CN+G +  A  L   ME  G+ PN  TF+ L+
Sbjct: 271 SRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A R+  LM  RG    AF Y+ L+ G    G +  A  +FV M  + C  +   Y T
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYAT 182

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G C+    EE+  L  E +S G  P +V YN L  G     ++EHALK+F+ M  + 
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY   I GLCK+G +  A  LF  +     E  +  Y+ LI G C  G L+ A+
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   GL+PN  T++++I   C   ++++A      +  KGV  N V + +L+ G 
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGL 362

Query: 241 IRNNETSKVVELLHRM 256
            +  +     EL+ +M
Sbjct: 363 CKTGKIDAADELMQKM 378



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 118/243 (48%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+  VY+T++ G C  G  + A  L      NG   N+V YN LI+GYC   ++E +L +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +  M      P V TY  L HGL +  +VE A+ LF  M  + +     TY   I G C 
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            G++  A  L   +           +S LID LCK  K+E A     SL + G+  N V 
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           Y  +I G C  G++D A +L   M ++G  P+  ++++L+ G  R  + S+   +L  M 
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 258 ERN 260
           E+ 
Sbjct: 415 EKG 417



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 115/239 (48%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N   Y+TLI+ +CL G+I  A++   S+   G   +   Y + + GYC+   +  +  ++
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
             M  +G   T  TY  L HGL     V  A+ +F  M+    A +T  Y T + GLC+ 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G   EA  L         E  I  Y+ LIDG C  G++E A ++F+ +      PNV TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
             +IHG C  G++++A  LF  M   G+ PN VT+  L+ G            LLH M+
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 124/257 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A RLL LM   G+ PN + +S LID  C   +++ A+    S+   G   N V Y +LI+
Sbjct: 301 AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CKT  ++ +  L  +M+S+G  P   +Y++L  GL    ++  A  + ++M    + A
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   ID L +        ++F  +        I  Y+  +   C+ G++E A  + 
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+ PN+VTYN +I G+ N G + +A   F  M  KG  PN  ++  L+   ++ 
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540

Query: 244 NETSKVVELLHRMDERN 260
           + +   V++    D ++
Sbjct: 541 SSSDNSVDIWKIADMKD 557



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 47/249 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           +D A  L+  MI  G  P+A  YS+LIDG C   ++ +A                     
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427

Query: 40  --------------RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                         +++F  M   G   ++VTY   +  YC+   +E++ ++  +M+ +G
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + P +VTYNTL  G   +  V  A   F+ M          +Y   +  + K      + 
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547

Query: 146 ELFRT-----LRVL-------KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           ++++      L+VL       +  L  + YSC I  LC++ +LE A   F  +    L P
Sbjct: 548 DIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTP 607

Query: 194 NVVTYNIMI 202
           +   Y  +I
Sbjct: 608 SEDVYTSII 616


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 35/292 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA    D M + GV P+   Y+TL  GF L G +  AR++   M + G   ++VTY T
Sbjct: 322 MDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTT 381

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+  ++EE+L L  E LS+G +  V+ YN L   L ++ ++E AL LFDEM+   
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK----------CELGI-------EA- 162
           +  +   Y+  I GLCK G++  A +L+  +R+ +            LG+       EA 
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEAR 501

Query: 163 -----------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                            Y+ +IDG  ++  +  A +L+  +   G+ P+VVT+N +I+GF
Sbjct: 502 NYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGF 561

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           C  G + +A  +   +  KG+ P+ VT+ TLM          ++   LH M+
Sbjct: 562 CRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEME 613



 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 38/291 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A     LM++ G+  ++F Y+ L+ G C+ G +D A      M+ +G   +VVTYNT
Sbjct: 287 IDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 61  -----------------------------------LINGYCKTKDVEESLNLYSEMLSKG 85
                                              LI G+C+  ++EE+L L  E LS+G
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +  V+ YN L   L ++ ++E AL LFDEM+   +  +   Y+  I GLCK G++  A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L+  +R+ +      A   ++ GL K G +  A   F +  R+ LM +VV YNIMI G+
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN--ETSKVVELL 253
                + +A  L+  M  +G+ P+ VTFNTL+ G C R +  E  K++E++
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVI 577



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 122/233 (52%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+    +T++  FC  G ID AR  F  M  NG +H+  +YN L++G C    ++E+L
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEAL 326

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
               +M   G+ P VVTYNTL  G   +  +  A K+  +M    +  +  TY T I G 
Sbjct: 327 GFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C+ G I EA +L +       +L +  Y+ L+  LCK+G++E A  LF  +  + L P+ 
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           + Y+I+IHG C +G + +A+ L+  M  K   P+      ++LG  +N   S+
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISE 499



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 118/223 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   MI+RG+ P+   ++TLI+GFC  G++  AR++   + + G + +VVTY TL+
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N YC+  +++E  +   EM +  + PT VTY  L  GL   +++  +L+L + M    + 
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            ++ TYNT I   CK   I +A +L+  + +  C+     Y  LI+ LC  G L+    +
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRM 713

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
             S+    +     TY  +I   C  GQ+ KA   F  M AKG
Sbjct: 714 VVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D M    + P+  VYS LI G C  G + RA +L+  M +     +      
Sbjct: 427 IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRA 486

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K  ++ E+ N +       +   VV YN +  G   +  +  A++L+ +M    
Sbjct: 487 VLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG 546

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+NT I+G C+ G ++EA ++   +R+      +  Y+ L++  C++G ++  +
Sbjct: 547 ITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMF 606

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +    ++P  VTY ++I G C   +M ++  L   M AKG+ P+ VT+NT++   
Sbjct: 607 HFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCF 666

Query: 241 IRNNETSKVVELLHRM 256
            +  E +K ++L + M
Sbjct: 667 CKGKEITKALQLYNMM 682



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 117/251 (46%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++L+++  +G+ P+   Y+TL++ +C  G +         M+ N  +   VTY  LI
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+   + ESL L   M +KG+ P  VTYNT+     +  ++  AL+L++ M   +  
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I+ LC  G + +   +  ++      L    Y  +I   C  G++  A   
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGY 748

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G + ++  Y+ +I+  C  G + +A   F+ M ++GV P+     T++    +
Sbjct: 749 FNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQ 808

Query: 243 NNETSKVVELL 253
               S V E L
Sbjct: 809 QGNNSSVFEFL 819



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 1/225 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E    L  M    V P    Y+ LI G C   ++  + +L   M   G + + VTYNT
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I  +CK K++ ++L LY+ ML     PT VTY  L + L     ++   ++   ++  +
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRN 721

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T I   C  G + +A   F  +      + I  YS +I+ LCK G +  A 
Sbjct: 722 ITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAK 781

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
             F  +   G+ P+      +++ F   G      + FL M  K 
Sbjct: 782 YFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE-FLAMVVKS 825



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 9/220 (4%)

Query: 37  DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           D   E F + D NG     + ++ L   Y + + + ++L + ++M     + +V TYN+L
Sbjct: 157 DLLLEKFRNWDSNG-----LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSL 211

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
            H +      +    +++E++ S       T +  I GLC+   + +A         +  
Sbjct: 212 LHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG 268

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
              I + + ++   CK+G ++ A   F  + + GL+ +  +YNI++HG C  G MD+A  
Sbjct: 269 P-SIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALG 327

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              DME  GV P+ VT+NTL  G +     S   +++ +M
Sbjct: 328 FTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 110/222 (49%), Gaps = 4/222 (1%)

Query: 37  DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           D   +++  + ++G   +  T + LI+G C+   +E++++   +  +K + P++V+ NT+
Sbjct: 219 DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTI 277

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
                ++  ++ A   F  M  + +  ++ +YN  + GLC  G + EA      +     
Sbjct: 278 MSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGV 337

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           E  +  Y+ L  G   +G +  A ++ Q +   GL P++VTY  +I G C  G +++A  
Sbjct: 338 EPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALK 397

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           L  +  ++G   N + +N ++L C+   +  ++ E L   DE
Sbjct: 398 LRQETLSRGFKLNVIFYN-MLLSCL--CKVGRIEEALTLFDE 436


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 35/292 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA    D M + GV P+   Y+TL  GF L G +  AR++   M + G   ++VTY T
Sbjct: 322 MDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTT 381

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+  ++EE+L L  E LS+G +  V+ YN L   L ++ ++E AL LFDEM+   
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK----------CELGI-------EA- 162
           +  +   Y+  I GLCK G++  A +L+  +R+ +            LG+       EA 
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEAR 501

Query: 163 -----------------YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                            Y+ +IDG  ++  +  A +L+  +   G+ P+VVT+N +I+GF
Sbjct: 502 NYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGF 561

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           C  G + +A  +   +  KG+ P+ VT+ TLM          ++   LH M+
Sbjct: 562 CRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEME 613



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 38/291 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A     LM++ G+  ++F Y+ L+ G C+ G +D A      M+ +G   +VVTYNT
Sbjct: 287 IDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 61  -----------------------------------LINGYCKTKDVEESLNLYSEMLSKG 85
                                              LI G+C+  ++EE+L L  E LS+G
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
            +  V+ YN L   L ++ ++E AL LFDEM+   +  +   Y+  I GLCK G++  A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L+  +R+ +      A   ++ GL K G +  A   F +  R+ LM +VV YNIMI G+
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNN--ETSKVVELL 253
                + +A  L+  M  +G+ P+ VTFNTL+ G C R +  E  K++E++
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVI 577



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 122/233 (52%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+    +T++  FC  G ID AR  F  M  NG +H+  +YN L++G C    ++E+L
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEAL 326

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
               +M   G+ P VVTYNTL  G   +  +  A K+  +M    +  +  TY T I G 
Sbjct: 327 GFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           C+ G I EA +L +       +L +  Y+ L+  LCK+G++E A  LF  +  + L P+ 
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           + Y+I+IHG C +G + +A+ L+  M  K   P+      ++LG  +N   S+
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISE 499



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 119/223 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   MI+RG+ P+   ++TLI+GFC  G++  AR++   + + G + +VVTY TL+
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N YC+  +++E  +   EM +  + PT VTY  L  GL   +++  +L+L + M    + 
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            ++ TYNT I   CK   I +A +L+  + +  C+     Y  LI+ LC  G L+    +
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRM 713

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
             S+    +    VTY  +I   C  GQ+ KA   F  M AKG
Sbjct: 714 VVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D M    + P+  VYS LI G C  G + RA +L+  M +     +      
Sbjct: 427 IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRA 486

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G  K  ++ E+ N +       +   VV YN +  G   +  +  A++L+ +M    
Sbjct: 487 VLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG 546

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+NT I+G C+ G ++EA ++   +R+      +  Y+ L++  C++G ++  +
Sbjct: 547 ITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMF 606

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +    ++P  VTY ++I G C   +M ++  L   M AKG+ P+ VT+NT++   
Sbjct: 607 HFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCF 666

Query: 241 IRNNETSKVVELLHRM 256
            +  E +K ++L + M
Sbjct: 667 CKGKEITKALQLYNMM 682



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 117/251 (46%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA ++L+++  +G+ P+   Y+TL++ +C  G +         M+ N  +   VTY  LI
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+   + ESL L   M +KG+ P  VTYNT+     +  ++  AL+L++ M   +  
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I+ LC  G + +   +  ++      L    Y  +I   C  G++  A   
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGY 748

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G + ++  Y+ +I+  C  G + +A   F+ M ++GV P+     T++    +
Sbjct: 749 FNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQ 808

Query: 243 NNETSKVVELL 253
               S V E L
Sbjct: 809 QGNNSSVFEFL 819



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 1/225 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M E    L  M    V P    Y+ LI G C   ++  + +L   M   G + + VTYNT
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I  +CK K++ ++L LY+ ML     PT VTY  L + L     ++   ++   ++  +
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRN 721

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T I   C  G + +A   F  +      + I  YS +I+ LCK G +  A 
Sbjct: 722 ITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAK 781

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
             F  +   G+ P+      +++ F   G      + FL M  K 
Sbjct: 782 YFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE-FLAMVVKS 825



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 9/220 (4%)

Query: 37  DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           D   E F + D NG     + ++ L   Y + + + ++L + ++M     + +V TYN+L
Sbjct: 157 DLLLEKFRNWDSNG-----LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSL 211

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
            H +      +    +++E++ S       T +  I GLC+   + +A         +  
Sbjct: 212 LHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG 268

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
              I + + ++   CK+G ++ A   F  + + GL+ +  +YNI++HG C  G MD+A  
Sbjct: 269 P-SIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALG 327

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              DME  GV P+ VT+NTL  G +     S   +++ +M
Sbjct: 328 FTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 110/222 (49%), Gaps = 4/222 (1%)

Query: 37  DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           D   +++  + ++G   +  T + LI+G C+   +E++++   +  +K + P++V+ NT+
Sbjct: 219 DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTI 277

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
                ++  ++ A   F  M  + +  ++ +YN  + GLC  G + EA      +     
Sbjct: 278 MSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGV 337

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           E  +  Y+ L  G   +G +  A ++ Q +   GL P++VTY  +I G C  G +++A  
Sbjct: 338 EPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALK 397

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           L  +  ++G   N + +N ++L C+   +  ++ E L   DE
Sbjct: 398 LRQETLSRGFKLNVIFYN-MLLSCL--CKVGRIEEALTLFDE 436


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 133/259 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +L D M+      + +    ++ G CL G +++  +L  +    GC+ N V YN L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC+  DV   + L  EM +KG+ PTVVTY TL   L     +E    L  EM+   +
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 YN+ ID LCK     +A  + + +    C+     +S LI GLC+ G+++ A  
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L +   R  L PN+ +Y  +IHGFC  G++  A +L ++M  +G  P+ VTF  L+ G +
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 242 RNNETSKVVELLHRMDERN 260
              + S+ + +  +M  R 
Sbjct: 481 VAGQVSEALLVREKMAARQ 499



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 127/260 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++  +L++     G  PNA  Y+ LIDG+C  G++ R   L   M+  G +  VVTY T
Sbjct: 275 VEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGT 334

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   +  D+E+  +L SEM  + + P V  YN++   L +      AL +  +M    
Sbjct: 335 LMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG 394

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T++T I GLC+ G + EA  L R     +    + +Y+ LI G C  G++  A 
Sbjct: 395 CDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVAS 454

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G  P+VVT+  +IHG    GQ+ +A  +   M A+ + P+   +N L+ G 
Sbjct: 455 NLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGL 514

Query: 241 IRNNETSKVVELLHRMDERN 260
            +         L+  M E+N
Sbjct: 515 CKKKMLPAARNLIEEMLEQN 534



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 126/276 (45%), Gaps = 36/276 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT--- 57
           + EA RLL    +  + PN   Y++LI GFC+ GE+  A  L V M   G   +VVT   
Sbjct: 415 VQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGA 474

Query: 58  --------------------------------YNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                           YN LI+G CK K +  + NL  EML + 
Sbjct: 475 LIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQN 534

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + P    Y TL  G      ++ A K+F+ M+   +  +   YN  I G C+ G + EA 
Sbjct: 535 VHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAV 594

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           E   T+R +        Y+ LI G  K G +  A  L   + +    PNVV Y+ +I+G+
Sbjct: 595 ECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGY 654

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           C  G  D A  LF  ME++G+ PN +T+ T+++G +
Sbjct: 655 CKLGDTDAAECLFGSMESQGLFPNVITY-TILIGSL 689



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 120/271 (44%), Gaps = 35/271 (12%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS LL  M++RG  P+   +  LI G  + G++  A  +   M     + +   YN LI+
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK K +  + NL  EML + + P    Y TL  G      ++ A K+F+ M+   +  
Sbjct: 513 GLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHP 572

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVL----------------------------- 154
           +   YN  I G C+ G + EA E   T+R +                             
Sbjct: 573 DVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLL 632

Query: 155 ------KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
                 +C+  + AYS LI+G CK+G  + A  LF S+   GL PNV+TY I+I      
Sbjct: 633 CDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKK 692

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++ +A   F  M     +PN  T ++L+ G
Sbjct: 693 DKVVRAAMYFEYMLLNQCSPNDYTLHSLVTG 723



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 15/225 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA   +  M + G  P+ F Y+TLI G+   G I  A  L   M    C  NVV Y++
Sbjct: 590 MNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSS 649

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK  D + +  L+  M S+G+ P V+TY  L   LF+  +V  A   F+ M  + 
Sbjct: 650 LINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQ 709

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAA---------------ELFRTLRVLKCELGIEAYSC 165
            +    T ++ + GLC +   + ++               ++FR L   +C+    AY+ 
Sbjct: 710 CSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNA 769

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +I  LC    L  A +L   +   G  P+  T+  +++GFC+ G+
Sbjct: 770 IIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK 814



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 17/255 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++ + M Q+G+ P+   Y+ +I G+C  G ++ A E   +M   G + +  TY T
Sbjct: 555 LDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTT 614

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY K  ++  +L+L  +M+ +  +P VV Y++L +G  ++   + A  LF  M+   
Sbjct: 615 LIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQG 674

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI------- 173
           +     TY   I  L K   +V AA  F  + + +C         L+ GLC         
Sbjct: 675 LFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISS 734

Query: 174 ---------GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
                    GK     ++F++L      P    YN +I   C    + +A DL   M  K
Sbjct: 735 HCSSTVNLHGK-GALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANK 793

Query: 225 GVAPNCVTFNTLMLG 239
           G  P+  TF +L+ G
Sbjct: 794 GYKPDSATFLSLLYG 808


>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 472

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 135/262 (51%), Gaps = 12/262 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   ++   M +RG  P+++ Y TLI G C  G ID A++LF  M    C   VVTY +
Sbjct: 173 VDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C +K+V+E++    EM  KGI P V TY++L  GL +  +   A++LF+ M    
Sbjct: 233 LINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFR--TLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                 TY T I GLCK   I EA EL     L+ LK + G+  Y  +I G C + K   
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL--YGKVISGFCAVSKFRE 350

Query: 179 AWELFQSLPRVGLMPNVVTYNI-------MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           A      +   G+ PN +T+NI       ++ G C +    +A  L+L M ++G++    
Sbjct: 351 AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTN-YPSRAFTLYLSMRSRGISVEVE 409

Query: 232 TFNTLMLGCIRNNETSKVVELL 253
           T ++L+    +  E  K V+L+
Sbjct: 410 TLDSLVKCLCKKGEFQKAVQLV 431



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 1/225 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLT-GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           M + G+ P     + LI   C   G +D   ++F  M   GC  +  TY TLI+G C+  
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFG 206

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            ++E+  L++EM+ K   PTVVTY +L +GL     V+ A++  +EM+   +     TY+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYS 266

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           + +DGLCK+G  ++A ELF  +    C   +  Y+ LI GLCK  K++ A EL   +   
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           GL P+   Y  +I GFC   +  +A +   +M   G+ PN +T+N
Sbjct: 327 GLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWN 371



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 8/226 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA R ++ M  +G+ PN F YS+L+DG C  G   +A ELF  M   GC  N+VTY T
Sbjct: 243 VDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK + ++E++ L   M  +G++P    Y  +  G   + +   A    DEM    
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGG 362

Query: 121 VAAETSTYNTFID-------GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +     T+N  +        GLC N Y   A  L+ ++R     + +E    L+  LCK 
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLCTN-YPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKK 421

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           G+ + A +L   +   G +PN  T+ ++I    ++  + +A D  L
Sbjct: 422 GEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEASDSLL 467



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 1/223 (0%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD-VEESLN 76
           P+   Y T++       +++ A + + +M   G    V + N LI   C+    V+  L 
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           ++ EM  +G  P   TY TL  GL    +++ A KLF EM   D A    TY + I+GLC
Sbjct: 179 IFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
            +  + EA      ++    E  +  YS L+DGLCK G+   A ELF+ +   G  PN+V
Sbjct: 239 GSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           TY  +I G C + ++ +A +L   M  +G+ P+   +  ++ G
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 5/191 (2%)

Query: 72  EESLNL----YSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHSDVAAETS 126
           E  LNL    Y  M   G+ PTV + N L   L      V+  LK+F EM       ++ 
Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSY 193

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T I GLC+ G I EA +LF  +    C   +  Y+ LI+GLC    ++ A    + +
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEM 253

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ PNV TY+ ++ G C DG+  +A +LF  M A+G  PN VT+ TL+ G  +  + 
Sbjct: 254 KGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313

Query: 247 SKVVELLHRMD 257
            + VELL RM+
Sbjct: 314 QEAVELLDRMN 324



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 1/222 (0%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           A ++   M I  C+ +     ++  GY +     +SL ++ +M      P+   Y T+  
Sbjct: 70  AEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA-ELFRTLRVLKCE 157
            L E +Q+  A K +  M+   +    ++ N  I  LC+N   V+A  ++F  +    C+
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCD 189

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
                Y  LI GLC+ G+++ A +LF  +      P VVTY  +I+G C    +D+A   
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             +M+ KG+ PN  T+++LM G  ++  + + +EL   M  R
Sbjct: 250 VEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291


>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
          Length = 800

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 134/259 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A +L D M+      + +    L+ G CL G ++   +L  +    GC+ +VV YN L
Sbjct: 396 DDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVL 455

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYC+  D+   L L  EM +KG  PT+VTY +L + L +   +E    LF EM+   +
Sbjct: 456 IDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGL 515

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +     YN+ ID LCK     +A  + + +    C+  I  ++ LI GLC  G +  A  
Sbjct: 516 SPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEH 575

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             +   R  L PN ++Y  +IHGFC  G++  A DL ++M  +G  P+ VTF  L+ G +
Sbjct: 576 FLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLV 635

Query: 242 RNNETSKVVELLHRMDERN 260
              + S+ + +  +M ER 
Sbjct: 636 VAGKVSEALIVREKMTERQ 654



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 4/262 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L++     G  P+   Y+ LIDG+C  G++ R   L   M+  G +  +VTY +
Sbjct: 430 VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGS 489

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN   K  D+E+  +L+ EM  +G+ P V  YN++   L +      A+ +  +M  S 
Sbjct: 490 LINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASG 549

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLET 178
              +  T+NT I GLC  G++ +A    R    ++ EL     +Y+ LI G C  G+L  
Sbjct: 550 CDPDIITFNTLITGLCHEGHVRKAEHFLR--EAIRRELNPNQLSYTPLIHGFCMRGELMA 607

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +L   +   G  P+VVT+  +IHG    G++ +A  +   M  + V P+   +N L+ 
Sbjct: 608 ASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 667

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G  + +       +L  M E+N
Sbjct: 668 GLCKKHMLPAAKNILEEMLEKN 689



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M +RG+ PN  +Y+++ID  C      +A  +   M  +GC  +++T+NTLI G C    
Sbjct: 510 MRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 569

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V ++ +   E + + + P  ++Y  L HG     ++  A  L  EM       +  T+  
Sbjct: 570 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGA 629

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I GL   G + EA  +   +   +    +  Y+ LI GLCK   L  A  + + +    
Sbjct: 630 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKN 689

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + P+   Y  +I GF     +  A  +F  ME KGV P+ V+ N ++ G
Sbjct: 690 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKG 738



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 87/177 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A   L   I+R + PN   Y+ LI GFC+ GE+  A +L + M   G   +VVT+  LI
Sbjct: 572 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALI 631

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G      V E+L +  +M  + + P V  YN L  GL + H +  A  + +EM   +V 
Sbjct: 632 HGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQ 691

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +   Y T IDG  ++  + +A ++F  +        I + + +I G C+ G +  A
Sbjct: 692 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEA 748



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 1/221 (0%)

Query: 37  DRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNT 95
           D   +   SM + G          L+  Y     + ++ ++   +  + G  P V   N 
Sbjct: 325 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNR 384

Query: 96  LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           L   L E  + + A KL+DEM   D  A+  +    + GLC  G + E  +L        
Sbjct: 385 LLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAG 444

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C   +  Y+ LIDG C+ G +     L   +   G +P +VTY  +I+     G ++K  
Sbjct: 445 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 504

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            LFL+M  +G++PN   +N+++    +    ++ + +L +M
Sbjct: 505 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 545



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 3/132 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M +R V P+  +Y+ LI G C    +  A+ +   M       +   Y T
Sbjct: 640 VSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYAT 699

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ +++++ ++  ++  M  KG+RP +V+ N +  G  +   +  A+     M+   
Sbjct: 700 LIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKQ- 758

Query: 121 VAAETSTYNTFI 132
              E     TFI
Sbjct: 759 --LEVERAGTFI 768


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 127/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   +   G+ P    Y+ LIDG+C  G+++ AR L   M   GC+ +V TY  
Sbjct: 394 LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G      +  +   + EMLSKG++P    YNT       +  +  A +L + M    
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEG 513

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++++T TYN  IDGLCK G + +A +L   +     +     Y+CLI   C+ G L  A 
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F+ +   GL P+ VTY + IH +C  G +  A+  F  M  +GV PN +T+N L+   
Sbjct: 574 KFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633

Query: 241 IRNNETSKVVELLHRMDER 259
            R   T       H M ER
Sbjct: 634 CRTGRTQLAYRHFHEMLER 652



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 141/288 (48%), Gaps = 47/288 (16%)

Query: 1   MDEASRLLDL------MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI--NGCM 52
           + +A+R  D+      M+Q G+ P+   Y+TL+D F   G  D+   L   M+   +GC+
Sbjct: 212 LSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCL 271

Query: 53  HNVVTYNTLINGYCKTKDVEESL----------------------------------NLY 78
            N VT+N +I G  +  D+EE+                                   +L 
Sbjct: 272 PNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQ 331

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM ++GI PTVVTYN + HGL +  QVE A   F EM+   +  +  TYN+ ++G CK 
Sbjct: 332 LEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKA 391

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA  LF  LR       +  Y+ LIDG C++G LE A  L + +   G +P+V TY
Sbjct: 392 GSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTY 451

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT-----LMLGCI 241
            I++ G  N   +  A + F +M +KG+ P+C  +NT     L LG I
Sbjct: 452 TILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAI 499



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 116/236 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    D M+ +G++P+ F Y+T I      G I +A  L   M + G   + VTYN LI+
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILID 526

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CKT ++ ++ +L  +M+  G++P  +TY  L H   E   +  A K F +M    +A 
Sbjct: 527 GLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAP 586

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY  FI   C+ G +  A   FR +     E     Y+ LI  LC+ G+ + A+  F
Sbjct: 587 SAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHF 646

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   GL+PN  TY ++I G C +G  + A   + +M   G+ P+ +T   L  G
Sbjct: 647 HEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG 702



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 36/272 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ +++ M +   + ++F Y+ LI G    G + +A +L + M+  G M  VVTYN 
Sbjct: 290 LEEAAEMVEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNA 348

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  ++  VE +   + EM + G++P V+TYN+L +G  +   ++ AL LF +++H+ 
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    TYN  IDG C+ G + EA  L   +    C   +  Y+ L+ G      L  A 
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAR 468

Query: 181 ELFQSLPRVGLMP-----------------------------------NVVTYNIMIHGF 205
           E F  +   GL P                                   + VTYNI+I G 
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGL 528

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           C  G ++ A DL + M   G+ P+C+T+  L+
Sbjct: 529 CKTGNLNDAKDLQMKMVHNGLQPDCITYTCLI 560



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 1/212 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL ++M+  G+  +   Y+ LIDG C TG ++ A++L + M  NG   + +TY  LI
Sbjct: 501 KAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLI 560

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +C+   + E+   + +M+S G+ P+ VTY    H       +  A   F +M    V 
Sbjct: 561 HAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVE 620

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I  LC+ G    A   F  +           Y+ LIDG CK G  E A   
Sbjct: 621 PNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRF 680

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           +  + + G+ P+ +T+  +  GF ++G M+ A
Sbjct: 681 YFEMHQNGIHPDYLTHKALFKGF-DEGHMNHA 711



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 3/199 (1%)

Query: 43  FVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           F  M  +G   +V   N ++         ++   +++EML  GI P++VTYNTL     +
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 103 IHQVEHALKLFDEMQ--HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
             + +    L  EM+   S       T+N  I GL + G + EAAE+   +R+ K +   
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-KASS 308

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             Y+ LI GL   G ++ A +L   +   G+MP VVTYN MIHG    GQ++ A   F++
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 221 MEAKGVAPNCVTFNTLMLG 239
           M A G+ P+ +T+N+L+ G
Sbjct: 369 MRAMGLQPDVITYNSLLNG 387



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 3/212 (1%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG--IRPTVVTYNTLFHGLFEIHQVE 107
           G   ++VTYNTL++ + K    ++   L  EM ++G    P  VT+N +  GL     +E
Sbjct: 232 GIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLE 291

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            A ++ + M+ S  A+ + TYN  I GL   G++ +A +L   +        +  Y+ +I
Sbjct: 292 EAAEMVEGMRLSKKAS-SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMI 350

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            GL + G++E A   F  +  +GL P+V+TYN +++G+C  G + +A  LF D+   G+A
Sbjct: 351 HGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLA 410

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           P  +T+N L+ G  R  +  +   L   M E+
Sbjct: 411 PTVLTYNILIDGYCRLGDLEEARRLKEEMVEQ 442



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+  G++P+   Y+ LI   C  G +  AR+ F  M  +G   + VTY  
Sbjct: 534 LNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTV 593

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+ YC+  ++  +   + +ML +G+ P  +TYN L H L    + + A + F EM    
Sbjct: 594 FIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERG 653

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF 148
           +     TY   IDG CK G   +A   +
Sbjct: 654 LVPNKYTYTLLIDGNCKEGNWEDAMRFY 681



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA--PNCVTFNTLMLGCIRNNE 245
           ++G+ P++VTYN ++  F  +G+ DK   L  +ME +G    PN VT N ++ G  R  +
Sbjct: 230 QLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGD 289

Query: 246 TSKVVELLHRM 256
             +  E++  M
Sbjct: 290 LEEAAEMVEGM 300


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 144/252 (57%), Gaps = 1/252 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EAS LL  MI R + P+ F YS L  G CL+G +++A  +   +     + +  T+N 
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNI 432

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN   +++++  +  L S M+ +GI+P +VTY TL  G  +  ++E A++++D+   +D
Sbjct: 433 LINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKAD 492

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             +    YN+ +DGLCK G I +AA L          L    Y+ L+ G C  G++E A+
Sbjct: 493 GKSNLVVYNSILDGLCKQGSI-DAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAF 551

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +  VG + N+V+YNIMI+  C  G + +A +L   M ++G+ P+ +T+ TL+   
Sbjct: 552 ALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNF 611

Query: 241 IRNNETSKVVEL 252
           +++  +  V+EL
Sbjct: 612 VKSYGSDNVIEL 623



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL D M++  + P+  VY++LI    + GE++ A  L   M     + +  TY+ 
Sbjct: 338 LDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSI 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G C +  + ++L ++  ++ + +     T+N L + +F+   +  A +L   M    
Sbjct: 398 LTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRG 457

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T + G CK G I  A +++        +  +  Y+ ++DGLCK G ++ A 
Sbjct: 458 IKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAAR 517

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   L + G + +V TYN ++HGFC +G+++KA  LFL+M   G   N V++N ++   
Sbjct: 518 LLVDKLQQNGFLDSV-TYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFL 576

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +EL+  M  +
Sbjct: 577 CKMGLIQQAMELMRAMASQ 595



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 9/259 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI---NGCMHNVVTYN 59
           EA  ++ LM++  + PN   ++ +ID     GE+D A +L  + ++        N+VTYN
Sbjct: 232 EAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYN 291

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +ING+CK + +E + N+ +EM+  GI     TY  L  G      ++ A +L DEM  +
Sbjct: 292 CIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVET 351

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDGLCKIGKL 176
            +  +T  YN+ I  L   G + EA+ L   +   R+L  E     YS L  GLC  G L
Sbjct: 352 RLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEF---TYSILTKGLCLSGHL 408

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  +   +    L+ +  T+NI+I+       +  A  L   M  +G+ P+ VT+ TL
Sbjct: 409 NKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTL 468

Query: 237 MLGCIRNNETSKVVELLHR 255
           + G  +  +    V++  +
Sbjct: 469 VAGHCKEGKIEAAVQIYDK 487



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L  MI+ G+  N   Y+ LIDG+   G +D A  L   M     + + V YN+
Sbjct: 303 LESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNS 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI       ++EE+  L S+M+++ I P   TY+ L  GL     +  AL++   +   +
Sbjct: 363 LIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERN 422

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T+N  I+ + ++  I  A +L  ++ V   +  +  Y  L+ G CK GK+E A 
Sbjct: 423 LVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAV 482

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +++    +     N+V YN ++ G C  G +D A  L   ++  G   + VT+NTL+ G 
Sbjct: 483 QIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARLLVDKLQQNGFL-DSVTYNTLLHGF 541

Query: 241 IRNNETSKVVELLHRM 256
             N E  K   L   M
Sbjct: 542 CVNGEVEKAFALFLEM 557



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 3/230 (1%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           GE D+   +++ M  +G   NV T+N +I   CK   + E++++   ML   I P VV++
Sbjct: 193 GETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSF 252

Query: 94  NTLFHGLFEIHQVEHALKLF---DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           N +     ++ +++ ALKL    + +    V+    TYN  I+G CK   +  A  +   
Sbjct: 253 NMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAE 312

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +  L  +     Y+ LIDG  + G L+ A+ L   +    L+P+ V YN +I+    +G+
Sbjct: 313 MIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGE 372

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +++A  L  DM  + + P+  T++ L  G   +   +K + + + + ERN
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERN 422



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 75/131 (57%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+RLL   +Q+    ++  Y+TL+ GFC+ GE+++A  LF+ M   G + N+V+YN +I
Sbjct: 514 DAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMI 573

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N  CK   +++++ L   M S+GI P ++TY TL     + +  ++ ++L D M      
Sbjct: 574 NFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAV 633

Query: 123 AETSTYNTFID 133
            +  TY + + 
Sbjct: 634 PDRQTYQSLVS 644



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 19/277 (6%)

Query: 2   DEASRLLDLMIQRGVRP----------------NAFVYSTLIDGFCLTGEIDRARELFVS 45
           D  S +  LM++ G  P                N  V+  L+        ++ A ++   
Sbjct: 110 DALSIMESLMLKNGKSPLEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIRK 169

Query: 46  MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
           + + G    +  +N  +N   K  + ++  N+Y EM++ G    V T+N + + L +  +
Sbjct: 170 LRLEGFWVTIHAWNNFLNLLLKLGETDKFWNMYMEMVASGYSENVNTFNLIIYALCKECK 229

Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL---KCELGIEA 162
           +  A+ +   M   ++     ++N  ID   K G +  A +L R   V+        I  
Sbjct: 230 LLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVT 289

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           Y+C+I+G CKI +LE+A  +   + ++G+  N  TY  +I G+   G +D A  L  +M 
Sbjct: 290 YNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMV 349

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              + P+ V +N+L+       E  +   LL  M  R
Sbjct: 350 ETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINR 386


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 136/261 (52%), Gaps = 3/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L+  +   G  P+  +YSTLIDG C     + ARELF      G + +V+ Y +
Sbjct: 135 IDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA--AGDVQDVIVYTS 192

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+G CK   ++E+  ++ +M+  G  P  V+YN + + L + ++V  A +L D+     
Sbjct: 193 FISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERK 252

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                      +DGLCK+  + EA  +  R L        +  YS +IDGLCK  +L+ A
Sbjct: 253 CMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDA 312

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + + Q + R G +P+VVTY  +I  FC  G++D+A +LF  M  +G A + V +N L+ G
Sbjct: 313 YIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRG 372

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R  +  + + ++  M  R 
Sbjct: 373 YCRAAKVDEAIAMIEEMAGRG 393



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 132/257 (51%), Gaps = 2/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A ++   MI   V+P+AF+Y+ +I   C   ++D A   F  M  +GC+ + VTY  L
Sbjct: 31  NKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVL 90

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++   K    E+   ++ EMLSKG  P +VTY T+ +G  +  +++ AL L   ++ +  
Sbjct: 91  VHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 150

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +   S Y+T IDGLCK+    EA ELF        ++ +  Y+  I GLCK GKL+ A  
Sbjct: 151 SPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQDVIV--YTSFISGLCKAGKLDEAKA 208

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +   G  P+ V+YN++I+  C D ++ +A +L      +   P       L+ G  
Sbjct: 209 VHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 268

Query: 242 RNNETSKVVELLHRMDE 258
           ++    +   +L RM E
Sbjct: 269 KSRRVEEACVILERMLE 285



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 3/226 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  L ++    G   +  VY++ I G C  G++D A+ + V M   GC  + V+YN +
Sbjct: 171 EEARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 228

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSD 120
           I   CK   V E+  L  + + +   P V     L  GL +  +VE A  + + M +  D
Sbjct: 229 IYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGD 288

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A    TY+  IDGLCK   + +A  + + +R   C   +  Y+ +ID  CK+G+L+ A 
Sbjct: 289 RAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAR 348

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           ELFQ +   G   +VV YNI+I G+C   ++D+A  +  +M  +G+
Sbjct: 349 ELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 112/254 (44%), Gaps = 37/254 (14%)

Query: 42  LFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV----------- 90
           L   M   G    +VT+ +LI   C+     ++L ++ +M+   ++P             
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 91  ------------------------VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
                                   VTY  L H LF+  + E   ++F+EM     + E  
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY T ++G CK G I +A  L R L+          YS LIDGLCK  + E A ELF+  
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA 180

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G + +V+ Y   I G C  G++D+A  + + M   G AP+ V++N ++    ++N  
Sbjct: 181 --AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 247 SKVVELLHRMDERN 260
           S+  EL+ +  ER 
Sbjct: 239 SEAKELMDQAMERK 252



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 51/86 (59%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L  M + G  P+   Y+ +ID FC  G +D ARELF  M   GC  +VV YN 
Sbjct: 309 LDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNI 368

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI 86
           LI GYC+   V+E++ +  EM  +GI
Sbjct: 369 LIRGYCRAAKVDEAIAMIEEMAGRGI 394


>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
          Length = 327

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 136/257 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  +LLD MI+ G+RP+ F+++ ++ G C  G +DRA E    +   G   +V++Y+ 
Sbjct: 41  VDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSI 100

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G    +  E+   L S+MLSKG  P VVTY+ L   L    +VE A+ L   M+   
Sbjct: 101 LLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQG 160

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y+  I   CK   +  A E   ++    C   I  Y+ ++  LCK GK + A 
Sbjct: 161 LTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEAL 220

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ L  VG  PNV +YN +     + G   +A  + L+M +K + P+ +T+N+L+   
Sbjct: 221 KIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLISCL 280

Query: 241 IRNNETSKVVELLHRMD 257
            R+    + +ELL  M+
Sbjct: 281 CRDAMVDQAIELLVDME 297



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 103/214 (48%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ LI+   L G +D   +L   M  +G   ++  +N ++ G C+   V+ +      + 
Sbjct: 28  YTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYIS 87

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           +KG  P V++Y+ L  GL    + E   KL  +M          TY+  I  LC++G + 
Sbjct: 88  AKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVE 147

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA  L + ++         +Y  LI   CK  +++ A E  +S+   G +P++V YN ++
Sbjct: 148 EAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTIL 207

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
              C +G+ D+A  +F  +   G  PN  ++NTL
Sbjct: 208 STLCKNGKADEALKIFEKLGEVGCPPNVSSYNTL 241



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 98/205 (47%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           ++VTY  LI        V++ + L  EM+  G+RP +  +N +  G+     V+ A +  
Sbjct: 24  SLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFI 83

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             +     A +  +Y+  + GL       +  +L   +    CE  +  YS LI  LC+ 
Sbjct: 84  RYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRD 143

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GK+E A  L + +   GL P+  +Y+ +I  FC + ++D A +    M + G  P+ V +
Sbjct: 144 GKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNY 203

Query: 234 NTLMLGCIRNNETSKVVELLHRMDE 258
           NT++    +N +  + +++  ++ E
Sbjct: 204 NTILSTLCKNGKADEALKIFEKLGE 228



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 35/171 (20%)

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           ++VTY  L         V+  +KL DEM  S              GL  + +I       
Sbjct: 24  SLVTYTILIEATILKGGVDDVMKLLDEMIES--------------GLRPDMFI------- 62

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
                         ++ ++ G+C+ G ++ A+E  + +   G  P+V++Y+I++ G  N 
Sbjct: 63  --------------FNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSILLRGLLNQ 108

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + +    L  DM +KG  PN VT++ L+    R+ +  + V LL  M E+
Sbjct: 109 RKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQ 159



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 51/99 (51%)

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
           + +  Y+ LI+     G ++   +L   +   GL P++  +N ++ G C +G +D+A + 
Sbjct: 23  ISLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEF 82

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
              + AKG AP+ ++++ L+ G +   +     +L+  M
Sbjct: 83  IRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDM 121


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 138/254 (54%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  M Q  + P+   Y+T+I GFC   E+++A +L   M  +GC  ++VT+  LI
Sbjct: 160 KAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILI 219

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +CK   ++E++ L  EM  KG+   ++ Y +L  G  +  +++    LFDE+     +
Sbjct: 220 DAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT I G CK G + EA+E+F  +        +  Y+ LIDGLC +GK + A +L
Sbjct: 280 PCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + +    PNVVTYNI+I+  C D  +  A ++   M+ +   P+ +T+N+L+ G   
Sbjct: 340 LNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCA 399

Query: 243 NNETSKVVELLHRM 256
             +  +  +LL+ M
Sbjct: 400 KGDLDEASKLLYLM 413



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 141/258 (54%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  LL  M  +G+  +  VY++LI GFC  GE+DR + LF  +   G     +TYNT
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+CK   ++E+  ++  M+ +G+RP V TY  L  GL  + + + AL+L + M   D
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD 347

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  I+ LCK+  + +A E+   ++  +       Y+ L+ GLC  G L+ A 
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEAS 407

Query: 181 ELFQSLPRVGLM--PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           +L   + +      P+V+++N +IHG C   ++ +A D++  +  K  A + VT N L+ 
Sbjct: 408 KLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLN 467

Query: 239 GCIRNNETSKVVELLHRM 256
             +++ + +K +EL  ++
Sbjct: 468 STLKSGDVNKAMELWKQI 485



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 132/237 (55%), Gaps = 2/237 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYNT 60
           +A  +++LM +R  RP+   Y++L+ G C  G++D A +L   M  D +    +V+++N 
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   + ++L++Y  ++ K     +VT N L +   +   V  A++L+ ++ +S 
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   + TY T IDG CK G +  A  L   +R+ +    +  Y+CL+  LCK G L+ AW
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ + R    P+V+++NIMI G    G +  A  L + M   G++P+  T++ L+
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLI 606



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 134/256 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  +L LM++RG   N + Y+ L+ G C   E  +A  L   M  N  M +VV+YNT+I 
Sbjct: 126 AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIR 185

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+C+ K++E++L L +EM   G   ++VT+  L     +  +++ A+ L  EM+H  + A
Sbjct: 186 GFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEA 245

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +   Y + I G C  G +     LF  +           Y+ LI G CK+G+L+ A E+F
Sbjct: 246 DLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIF 305

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G+ PNV TY  +I G C  G+  +A  L   M  K   PN VT+N ++    ++
Sbjct: 306 EFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKD 365

Query: 244 NETSKVVELLHRMDER 259
           +  +  +E++  M +R
Sbjct: 366 SLVADALEIVELMKKR 381



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 126/250 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++     N    S L++ F    +   A  +   M   G   NV  YN L+ G C+  +
Sbjct: 98  MLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLE 157

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
             ++++L  EM    + P VV+YNT+  G  E  ++E AL+L +EMQ S  +    T+  
Sbjct: 158 FGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGI 217

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK G + EA  L + ++    E  +  Y+ LI G C  G+L+    LF  +   G
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P  +TYN +I GFC  G++ +A ++F  M  +GV PN  T+  L+ G     +T + +
Sbjct: 278 DSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 251 ELLHRMDERN 260
           +LL+ M +++
Sbjct: 338 QLLNLMLQKD 347



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 131/261 (50%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +L + M   G   +   +  LID FC  G++D A  L   M   G   +++ Y +
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C   +++    L+ E+L +G  P  +TYNTL  G  ++ +++ A ++F+ M    
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TY   IDGLC  G   EA +L   +     E  +  Y+ +I+ LCK   +  A 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM--EAKGVAPNCVTFNTLML 238
           E+ + + +    P+ +TYN ++ G C  G +D+A  L   M  ++    P+ ++FN L+ 
Sbjct: 373 EIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIH 432

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G  + N   + +++   + E+
Sbjct: 433 GLCKGNRLHQALDIYDLLVEK 453



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 37/250 (14%)

Query: 1   MDEASRLLDLMIQRG--VRPNAFVYSTLIDGFCL-------------------------- 32
           +DEAS+LL LM++      P+   ++ LI G C                           
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTT 462

Query: 33  ---------TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
                    +G++++A EL+  +  +  + N  TY T+I+G+CKT  +  +  L  +M  
Sbjct: 463 NILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRL 522

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
             + P+V  YN L   L +   ++ A +LF+EMQ  D   +  ++N  IDG  K G I  
Sbjct: 523 SELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKS 582

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A  L   +        +  YS LI+   K+G L+ A   F  +   G  P+    + ++ 
Sbjct: 583 AESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLK 642

Query: 204 GFCNDGQMDK 213
              + G+ DK
Sbjct: 643 YCISQGETDK 652



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 35/236 (14%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N L+    ++++ E + + Y +ML        V+ + L     ++ +   A  +   M  
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-------------VLK---------- 155
              A     YN  + GLC+N    +A  L R +R             V++          
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 156 ------------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
                       C   +  +  LID  CK GK++ A  L + +   GL  +++ Y  +I 
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           GFC+ G++D+   LF ++  +G +P  +T+NTL+ G  +     +  E+   M ER
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER 311


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 3/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++   L   M+++   PN   +  L+  FC  G ++RA ++   M  +GC  N    N +
Sbjct: 267 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 326

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   V+++    + M S G  P  ++Y T+  GL    + E A +L  EM   + 
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+NTFI  LC+ G I +A  L   +    CE+ I  Y+ L++G C  G++++A E
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF S+P     PN +TY  ++ G CN  ++D A +L  +M  K  APN VTFN L+    
Sbjct: 447 LFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 242 RNNETSKVVELLHRMDE 258
           +     + +EL+ +M E
Sbjct: 504 QKGLMDEAIELVEQMME 520



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+RL+D    RG  P+ ++ + LI   C  G    A  +  + + +G   +V  YNT
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GYC+   ++ +  L + M    + P   TY  +  GL +  +V  AL L D+M H  
Sbjct: 119 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   ++ +CK+    +A E+   +R   C   I  Y+ +I+G+C+ G+++ A 
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    L   G  P+ V+Y  ++ G C   + +   +LF +M  K   PN VTF+ L+   
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 241 IRNNETSKVVELLHRM 256
            R     + +++L +M
Sbjct: 296 CRGGMVERAIQVLEQM 311



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 125/256 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LLD M+ RG +P+   Y+ L++  C +    +A E+   M   GC  N+VTYN +I
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+   V+++    + + S G +P  V+Y T+  GL    + E   +LF EM   +  
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 282

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  +   C+ G +  A ++   +    C       + +I+ +CK G+++ A++ 
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++   G  P+ ++Y  ++ G C   + + A +L  +M  K   PN VTFNT +    +
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 243 NNETSKVVELLHRMDE 258
                +   L+ +M E
Sbjct: 403 KGLIEQATMLIEQMSE 418



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 132/293 (45%), Gaps = 38/293 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M  +G  PN   Y+ +I+G C  G +D ARE    +   G   + V+Y T++
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C  K  E+   L++EM+ K   P  VT++ L         VE A+++ ++M     A
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCA 317

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T+  N  I+ +CK G + +A +    +    C     +Y+ ++ GLC+  + E A EL
Sbjct: 318 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 377

Query: 183 FQSLPRVGLMP-----------------------------------NVVTYNIMIHGFCN 207
            + + R    P                                   N+VTYN +++GFC 
Sbjct: 378 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 437

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G++D A +LF  M  K   PN +T+ TL+ G           ELL  M +++
Sbjct: 438 QGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A+ L++ M + G   N   Y+ L++GFC+ G +D A ELF SM    C  N +TY T
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTT 462

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C  + ++ +  L +EML K   P VVT+N L     +   ++ A++L ++M    
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT +DG+  +    EA EL   L        I  YS +I  L +  ++E A 
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +  +G+ P  V YN ++   C     D A D F  M + G  PN +T+ TL+ G 
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642

Query: 241 IRNNETSKVVELLHRMDER 259
              +   +  +LL  +  R
Sbjct: 643 ANEDFLKETRDLLRELCSR 661



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 3/255 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  LL  M+++   PN   ++T I   C  G I++A  L   M  +GC  N+VTYN L
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG+C    V+ +L L+  M  K   P  +TY TL  GL    +++ A +L  EM   D 
Sbjct: 432 VNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC 488

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    T+N  +   C+ G + EA EL   +    C   +  Y+ L+DG+      E A E
Sbjct: 489 APNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALE 548

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   L   G+ P++VTY+ +I     + ++++A  +F  ++  G+ P  V +N ++L   
Sbjct: 549 LLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 608

Query: 242 RNNETSKVVELLHRM 256
           +   T   ++    M
Sbjct: 609 KRCNTDGAIDFFAYM 623



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+  M    V P+A+ Y+ +I G C  G +  A  L   M   GC  +VVTY  
Sbjct: 129 LDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTV 185

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK+    +++ +  EM +KG  P +VTYN + +G+    +V+ A +  + +    
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG 245

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T +Y T + GLC      +  ELF  +    C      +  L+   C+ G +E A 
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + +   G   N    NI+I+  C  G++D A     +M + G +P+ +++ T++ G 
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 241 IRNNETSKVVELLHRMDERN 260
            R        ELL  M  +N
Sbjct: 366 CRAERWEDAKELLKEMVRKN 385



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 112/219 (51%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L+L      +PN   Y+TL+ G C    +D A EL   M    C  NVVT+N L++ +C+
Sbjct: 445 LELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              ++E++ L  +M+  G  P ++TYNTL  G+      E AL+L   +  + V+ +  T
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVT 564

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y++ I  L +   + EA ++F  ++ L        Y+ ++  LCK    + A + F  + 
Sbjct: 565 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV 624

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
             G MPN +TY  +I G  N+  + +  DL  ++ ++GV
Sbjct: 625 SNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 3/187 (1%)

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           D+ E+  L     S+G  P V     L   L    +   A ++    + S  A +   YN
Sbjct: 58  DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T + G C+ G +  A  L  ++ V         Y+ +I GLC  G++  A  L   +   
Sbjct: 118 TLVAGYCRYGQLDAARRLIASMPVAP---DAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+VVTY +++   C      +A ++  +M AKG  PN VT+N ++ G  R       
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 250 VELLHRM 256
            E L+R+
Sbjct: 235 REFLNRL 241



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 3/166 (1%)

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           N     L     +  A +L D       A +       I  LC+ G   +AA + R    
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
               + + AY+ L+ G C+ G+L+ A  L  S+P   + P+  TY  +I G C+ G++ +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A  L  DM  +G  P+ VT+  L+    ++    + +E+L  M  +
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK 209


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 141/291 (48%), Gaps = 35/291 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M+  G+ P+++ Y+TLI G+C  G +  A  +      NG + +  TY +LI
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C   +   +L L++E L KGI+P V+ YNTL  GL     +  A +L +EM    + 
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTL--------------------RVLKCELGIE- 161
            E  T+N  ++GLCK G + +A  L + +                      LK E  +E 
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483

Query: 162 --------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
                          Y+ L++GLCK  K E   E ++++   G  PN+ T+NI++   C 
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             ++D+A  L  +M+ K V P+ VTF TL+ G  +N +      L  +M+E
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 135/259 (52%), Gaps = 1/259 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L +  + +G++PN  +Y+TLI G    G I  A +L   M   G +  V T+N L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG CK   V ++  L   M+SKG  P + T+N L HG     ++E+AL++ D M  + V
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN+ ++GLCK     +  E ++T+    C   +  ++ L++ LC+  KL+ A  
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGC 240
           L + +    + P+ VT+  +I GFC +G +D A+ LF  M EA  V+ +  T+N ++   
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612

Query: 241 IRNNETSKVVELLHRMDER 259
                 +   +L   M +R
Sbjct: 613 TEKLNVTMAEKLFQEMVDR 631



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+ +MI +G  P+ F ++ LI G+    +++ A E+   M  NG   +V TYN+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CKT   E+ +  Y  M+ KG  P + T+N L   L    +++ AL L +EM++  
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           V  +  T+ T IDG CKNG +  A  LFR +    K       Y+ +I    +   +  A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +LFQ +    L P+  TY +M+ GFC  G ++  +   L+M   G  P+  T   ++  
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681

Query: 240 CIRNNETSKVVELLHRMDER 259
               +   +   ++HRM ++
Sbjct: 682 LCVEDRVYEAAGIIHRMVQK 701



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E  +LLD +I+RGV PN F Y+  I G C  GE+D A  +   +   G   +V+TYN 
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE------------- 107
           LI G CK    +E+     +M+++G+ P   TYNTL  G  +   V+             
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351

Query: 108 ----------------------HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                                  AL LF+E     +      YNT I GL   G I+EAA
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L   +        ++ ++ L++GLCK+G +  A  L + +   G  P++ T+NI+IHG+
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
               +M+ A ++   M   GV P+  T+N+L+ G  + ++   V+E    M E+
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 126/234 (53%), Gaps = 5/234 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  +LD+M+  GV P+ + Y++L++G C T + +   E + +M   GC  N+ T+N 
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
           L+   C+ + ++E+L L  EM +K + P  VT+ TL  G  +   ++ A  LF +M+ + 
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS--CLIDGLCKIGKLE 177
            V++ T TYN  I    +   +  A +LF+ + V +C LG + Y+   ++DG CK G + 
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM-VDRC-LGPDGYTYRLMVDGFCKTGNVN 654

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
             ++    +   G +P++ T   +I+  C + ++ +A  +   M  KG+ P  V
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 119/253 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++   M  RG+ P+ + ++  +  FC T     A  L  +M   GC  NVV Y T+
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G+ +     E   L+ +ML+ G+   + T+N L   L +   V+   KL D++    V
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN FI GLC+ G +  A  +   L     +  +  Y+ LI GLCK  K + A  
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               +   GL P+  TYN +I G+C  G +  A  +  D    G  P+  T+ +L+ G  
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367

Query: 242 RNNETSKVVELLH 254
              ET++ + L +
Sbjct: 368 HEGETNRALALFN 380



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 116/239 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + M      P  F Y+ ++     +G  D+A ++++ M   G   +V ++  
Sbjct: 92  VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +  +CKT     +L L + M S+G    VV Y T+  G +E +      +LF +M  S 
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V+   ST+N  +  LCK G + E  +L   +        +  Y+  I GLC+ G+L+ A 
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            +   L   G  P+V+TYN +I+G C + +  +A      M  +G+ P+  T+NTL+ G
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 108/235 (45%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           VY   +  +   G++  A  +F  MD   C   V +YN +++    +   +++  +Y  M
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
             +GI P V ++        +  +   AL+L + M           Y T + G  +  + 
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            E  ELF  +      L +  ++ L+  LCK G ++   +L   + + G++PN+ TYN+ 
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           I G C  G++D A  +   +  +G  P+ +T+N L+ G  +N++  +    L +M
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 6/226 (2%)

Query: 38  RARELFVSMDIN-GCMHNVVTYNTLING---YCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           +A E+F SM    G  H + TY ++I     Y K + +EE L    E +   +   V   
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
               +G     +V+ A+ +F+ M   D      +YN  +  L  +GY  +A +++  +R 
Sbjct: 82  AMKNYG--RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
                 + +++  +   CK  +   A  L  ++   G   NVV Y  ++ GF  +    +
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            ++LF  M A GV+    TFN L+    +  +  +  +LL ++ +R
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 3/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++   L   M+++   PN   +  L+  FC  G ++RA ++   M  +GC  N    N +
Sbjct: 267 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 326

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   V+++    + M S G  P  ++Y T+  GL    + E A +L  EM   + 
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+NTFI  LC+ G I +A  L   +    CE+ I  Y+ L++G C  G++++A E
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF S+P     PN +TY  ++ G CN  ++D A +L  +M  K  APN VTFN L+    
Sbjct: 447 LFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 242 RNNETSKVVELLHRMDE 258
           +     + +EL+ +M E
Sbjct: 504 QKGLMDEAIELVEQMME 520



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+RL+D    RG  P+ ++ + LI   C  G    A  +  + + +G   +V  YNT
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GYC+   ++ +  L + M    + P   TY  +  GL +  +V  AL L D+M H  
Sbjct: 119 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   ++ +CK+    +A E+   +R   C   I  Y+ +I+G+C+ G+++ A 
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E    L   G  P+ V+Y  ++ G C   + +   +LF +M  K   PN VTF+ L+   
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 241 IRNNETSKVVELLHRM 256
            R     + +++L +M
Sbjct: 296 CRGGMVERAIQVLEQM 311



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 125/256 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LLD M+ RG +P+   Y+ L++  C +    +A E+   M   GC  N+VTYN +I
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+   V+++    + + S G +P  V+Y T+  GL    + E   +LF EM   +  
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 282

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  +   C+ G +  A ++   +    C       + +I+ +CK G+++ A++ 
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++   G  P+ ++Y  ++ G C   + + A +L  +M  K   PN VTFNT +    +
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402

Query: 243 NNETSKVVELLHRMDE 258
                +   L+ +M E
Sbjct: 403 KGLIEQATMLIEQMSE 418



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 132/293 (45%), Gaps = 38/293 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M  +G  PN   Y+ +I+G C  G +D ARE    +   G   + V+Y T++
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C  K  E+   L++EM+ K   P  VT++ L         VE A+++ ++M     A
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCA 317

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T+  N  I+ +CK G + +A +    +    C     +Y+ ++ GLC+  + E A EL
Sbjct: 318 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 377

Query: 183 FQSLPRVGLMP-----------------------------------NVVTYNIMIHGFCN 207
            + + R    P                                   N+VTYN +++GFC 
Sbjct: 378 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 437

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G++D A +LF  M  K   PN +T+ TL+ G           ELL  M +++
Sbjct: 438 QGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 130/259 (50%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A+ L++ M + G   N   Y+ L++GFC+ G +D A ELF SM    C  N +TY T
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTT 462

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C  + ++ +  L +EML K   P VVT+N L     +   ++ A++L ++M    
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT +DG+ K+    EA EL   L        I  YS +I  L +  ++E A 
Sbjct: 523 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +  +G+ P  V YN ++   C     D A D F  M + G  PN +T+ TL+ G 
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642

Query: 241 IRNNETSKVVELLHRMDER 259
              +   +  +LL  +  R
Sbjct: 643 ANEDFLKETRDLLRELCSR 661



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 3/255 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  LL  M+++   PN   ++T I   C  G I++A  L   M  +GC  N+VTYN L
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG+C    V+ +L L+  M  K   P  +TY TL  GL    +++ A +L  EM   D 
Sbjct: 432 VNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC 488

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    T+N  +   C+ G + EA EL   +    C   +  Y+ L+DG+ K    E A E
Sbjct: 489 APNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALE 548

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   L   G+ P++VTY+ +I     + ++++A  +F  ++  G+ P  V +N ++L   
Sbjct: 549 LLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 608

Query: 242 RNNETSKVVELLHRM 256
           +   T   ++    M
Sbjct: 609 KRCNTDGAIDFFAYM 623



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+  M    V P+A+ Y+ +I G C  G +  A  L   M   GC  +VVTY  
Sbjct: 129 LDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTV 185

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK+    +++ +  EM +KG  P +VTYN + +G+    +V+ A +  + +    
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG 245

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T +Y T + GLC      +  ELF  +    C      +  L+   C+ G +E A 
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + +   G   N    NI+I+  C  G++D A     +M + G +P+ +++ T++ G 
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 241 IRNNETSKVVELLHRMDERN 260
            R        ELL  M  +N
Sbjct: 366 CRAERWEDAKELLKEMVRKN 385



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 113/219 (51%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L+L      +PN   Y+TL+ G C    +D A EL   M    C  NVVT+N L++ +C+
Sbjct: 445 LELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              ++E++ L  +M+  G  P ++TYNTL  G+ +    E AL+L   +  + V+ +  T
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 564

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y++ I  L +   + EA ++F  ++ L        Y+ ++  LCK    + A + F  + 
Sbjct: 565 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV 624

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
             G MPN +TY  +I G  N+  + +  DL  ++ ++GV
Sbjct: 625 SNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 3/187 (1%)

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
           D+ E+  L     S+G  P V     L   L    +   A ++    + S  A +   YN
Sbjct: 58  DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           T + G C+ G +  A  L  ++ V         Y+ +I GLC  G++  A  L   +   
Sbjct: 118 TLVAGYCRYGQLDAARRLIASMPVAP---DAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+VVTY +++   C      +A ++  +M AKG  PN VT+N ++ G  R       
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234

Query: 250 VELLHRM 256
            E L+R+
Sbjct: 235 REFLNRL 241



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 3/166 (1%)

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           N     L     +  A +L D       A +       I  LC+ G   +AA + R    
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
               + + AY+ L+ G C+ G+L+ A  L  S+P   + P+  TY  +I G C+ G++ +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           A  L  DM  +G  P+ VT+  L+    ++    + +E+L  M  +
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK 209


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 132/244 (54%), Gaps = 1/244 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  +   M+++G++PN F YS LIDGF    +   A E+   M  +    N V YNT
Sbjct: 500 MDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNT 559

Query: 61  LINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +ING CK     ++  +   ++  K       +YN++  G F+    + A++ + EM  +
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSEN 619

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            ++    T+ + I+G CK+  +  A E+   ++    +L + AY  LIDG CK   ++TA
Sbjct: 620 GISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTA 679

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + LF  L  +GLMPNV  YN +I GF N G+MD A DL+  M   G++ +  T+ T++ G
Sbjct: 680 YTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739

Query: 240 CIRN 243
            +++
Sbjct: 740 LLKD 743



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 137/262 (52%), Gaps = 9/262 (3%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-----GCMHNVVTY 58
           A  +++ MI      N  +Y+T+I+G C  G+  +A+E+  ++        GC     +Y
Sbjct: 538 AWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGC----TSY 593

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N++I+G+ K  D + ++  Y EM   GI P VVT+ +L +G  + ++++ AL++  EM+ 
Sbjct: 594 NSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKS 653

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
            D+  +   Y   IDG CK   +  A  LF  L  L     +  Y+ LI G   +GK++ 
Sbjct: 654 KDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDA 713

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +L++ +   G+  ++ TY  MI G   DG +  A DL+ ++ A G+ P+ + +  L+ 
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVN 773

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G  +  +  +  ++L  M +++
Sbjct: 774 GLSKKGQFVRASKMLEEMKKKD 795



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 127/230 (55%), Gaps = 1/230 (0%)

Query: 30  FCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPT 89
            C  G++D A      M+  G   NVV YN ++  +C+ K+++ + +++SEML KG++P 
Sbjct: 459 LCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPN 518

Query: 90  VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
             TY+ L  G F+    ++A ++ ++M  S+  A    YNT I+GLCK G   +A E+ +
Sbjct: 519 NFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578

Query: 150 TL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
            L +  +  +G  +Y+ +IDG  K G  ++A E ++ +   G+ PNVVT+  +I+GFC  
Sbjct: 579 NLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKS 638

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            +MD A ++  +M++K +  +   +  L+ G  + N+      L   + E
Sbjct: 639 NRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLE 688



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 134/259 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A      M + G+ PN   +++LI+GFC +  +D A E+   M       +V  Y  L
Sbjct: 607 DSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGAL 666

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G+CK  D++ +  L+SE+L  G+ P V  YN L  G   + +++ A+ L+ +M +  +
Sbjct: 667 IDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGI 726

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TY T IDGL K+G ++ A++L+  L  L        Y  L++GL K G+   A +
Sbjct: 727 SCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASK 786

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           + + + +    PNV+ Y+ +I G   +G +++A  +  +M  KG+  +   FN L+ G +
Sbjct: 787 MLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRV 846

Query: 242 RNNETSKVVELLHRMDERN 260
                +  +  L   + R+
Sbjct: 847 EKPPAAAKISSLASPEMRS 865



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA ++ D M+  G+  +    ++LI GFC   E+ +A + F  M+  G   + V ++ 
Sbjct: 326 MEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSV 385

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I  +CK  ++E+++ +Y  M S GI P+ V  + +  G  +    E AL++F++   + 
Sbjct: 386 MIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETW 445

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A        F+  LCK G +  A    R +     E  +  Y+ ++   C++  ++ A 
Sbjct: 446 IAHGFMCNKIFL-LLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLAR 504

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   GL PN  TY+I+I GF  +     A ++   M A     N V +NT++ G 
Sbjct: 505 SIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGL 564

Query: 241 IRNNETSKVVELLHRM 256
            +  +TSK  E+L  +
Sbjct: 565 CKVGQTSKAKEMLQNL 580



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A    +LM+ R V P     + ++     +  ID A+E++  M + G   + VT   
Sbjct: 185 MDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQL 244

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHS 119
           L+    + +  EE++ ++  ++S+G  P  + ++       ++  +  AL L  EM +  
Sbjct: 245 LMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKG 304

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V A   TY + I    K G + EA ++   +      + + A + LI G C   +L  A
Sbjct: 305 GVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKA 364

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + F  +   GL P+ V +++MI  FC + +M+KA +++  M++ G+AP+ V  + ++ G
Sbjct: 365 LDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQG 424

Query: 240 CIRNNETSKVVELLH 254
           C++       +E+ +
Sbjct: 425 CLKAESPEAALEIFN 439



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 1/236 (0%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
            ++ L++ +     +D A + F  M     +  V   N +++   ++  ++E+  +Y++M
Sbjct: 171 AFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
           +  G+    VT   L        + E A+K+F  +       +   ++  +   CK   +
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDL 290

Query: 142 VEAAELFRTLRVL-KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           V A +L R +R         E Y+ +I    K G +E A ++   +   G+  +V+    
Sbjct: 291 VMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATS 350

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +I GFCN  ++ KA D F  ME +G+AP+ V F+ ++    +N E  K VE+  RM
Sbjct: 351 LITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRM 406


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 132/256 (51%), Gaps = 3/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L + M++RG++P+ + Y+ L+ G C  G+I+ A  L+     NG   +  TY  
Sbjct: 493 VEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGI 552

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK   VEE   L+ EM++  I    V Y TL     E   +  A +L D+M+   
Sbjct: 553 MIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG 612

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   ++TY++ I GL   G +  A +L   +R       +  Y+ LI G CK+G++    
Sbjct: 613 IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVD 672

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + Q +    + PN +TY IMI+G C  G M  A  L  +M  KG+ P+ VT+N L  G 
Sbjct: 673 SILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGF 732

Query: 241 IRNN---ETSKVVELL 253
            +     E  KV +L+
Sbjct: 733 CKEGKMEEALKVCDLM 748



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 128/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L     + G  P+A+ Y  +IDG+C    ++   +LF  M       N V Y T
Sbjct: 528 IEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGT 587

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YC+  ++ E+  L  +M S+GI  T  TY++L HGL  I  V+ A +L DEM+   
Sbjct: 588 LIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEG 647

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++     Y   I G CK G + +   + + + +         Y+ +I+G CK+G ++ A 
Sbjct: 648 LSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAA 707

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L   + + G++P+ VTYN + +GFC +G+M++A  +   M   G++ + +T+ TL+ G
Sbjct: 708 KLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 128/259 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA  L   ++++G   N    + LI G C  G  + A +L   M   G + + ++YNTL
Sbjct: 424 SEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTL 483

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I   CK   VEE   L  EM+ +GI+P + TYN L HGL  + ++E A  L+ E + +  
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY   IDG CK   + E  +LF+ +  +K E     Y  LI   C+ G +  A+ 
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G+     TY+ +IHG  N G +D A+ L  +M  +G++PN V +  L+ G  
Sbjct: 604 LRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYC 663

Query: 242 RNNETSKVVELLHRMDERN 260
           +  +  KV  +L  M   N
Sbjct: 664 KLGQMHKVDSILQEMSINN 682



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 141/290 (48%), Gaps = 35/290 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA+ +L  M  RG  PN  VY+TLIDG+C  G I  A ++   M  NG   N VT N+L
Sbjct: 284 DEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSL 343

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH----------------------- 98
           I GYCK+  +E + +L  EML+ G      T+ ++ H                       
Sbjct: 344 IQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNF 403

Query: 99  ------------GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
                       GL +  +   A++L+  +     AA T T N  I GLC+ G   EAA+
Sbjct: 404 KPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAK 463

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           L + +      L   +Y+ LI   CK GK+E  ++L + + R G+ P++ TYN+++HG C
Sbjct: 464 LLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLC 523

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N G++++A  L+ + +  G  P+  T+  ++ G  + N   +  +L   M
Sbjct: 524 NMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 4/256 (1%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++ D+M   GV P+ +++ST+++ FC  G +D A ELF  M+  G   NVVTYN +I+G 
Sbjct: 183 QVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGL 242

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK   ++E+     +M  + ++P++VTY  L +GL ++ + + A  +  EM     A   
Sbjct: 243 CKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNN 302

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELF 183
             YNT IDG C+ G I  A ++   +  +   +   + +C  LI G CK  ++E A  L 
Sbjct: 303 VVYNTLIDGYCRIGNISTALQIRDDM--ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLL 360

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G + N  T+  +IH  C   + D A    ++M  +   PN      L+ G  +N
Sbjct: 361 EEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQN 420

Query: 244 NETSKVVELLHRMDER 259
            + S+ +EL +R+ E+
Sbjct: 421 GKQSEAIELWYRLLEK 436



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 117/238 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A   +  M+ R  +PN  + + L+ G C  G+   A EL+  +   G   N VT N L
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNAL 448

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C+    EE+  L  EML +G+    ++YNTL     +  +VE   KL +EM    +
Sbjct: 449 IHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGI 508

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  + GLC  G I EA  L+   +          Y  +IDG CK  ++E   +
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEK 568

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           LFQ +  + +  N V Y  +I  +C +G M +A  L  DM ++G+     T+++L+ G
Sbjct: 569 LFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M + GV PN   Y+ +I G C  G +D A +    M+      ++VTY  
Sbjct: 213 VDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGV 272

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  K +  +E+  +  EM  +G  P  V YNTL  G   I  +  AL++ D+M  + 
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG 332

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV------------------LKC------ 156
           ++  + T N+ I G CK+  +  A  L   +                    LKC      
Sbjct: 333 ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSAL 392

Query: 157 ----ELGIEAY-------SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
               E+ +  +       + L+ GLC+ GK   A EL+  L   G   N VT N +IHG 
Sbjct: 393 LFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGL 452

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C  G  ++A  L  +M  +G+  + +++NTL+L C +  +  +  +L   M  R
Sbjct: 453 CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 35/294 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A ++ D MI  G+ PN+   ++LI G+C + +++ A  L   M   G + N  T+ +
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTS 377

Query: 61  -----------------------------------LINGYCKTKDVEESLNLYSEMLSKG 85
                                              L++G C+     E++ L+  +L KG
Sbjct: 378 VIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                VT N L HGL E    E A KL  EM    +  ++ +YNT I   CK G + E  
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGF 497

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L   +     +  +  Y+ L+ GLC +GK+E A  L+    + G  P+  TY IMI G+
Sbjct: 498 KLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGY 557

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           C   ++++   LF +M    +  N V + TL+     N    +   L   M  R
Sbjct: 558 CKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 111/216 (51%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           ELF  +   G   ++ T N L++   K  +V+ S  ++  M   G+ P V  ++T+ +  
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
               +V+ A++LF +M+   VA    TYN  I GLCKNG + EA +    +   + +  +
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             Y  LI+GL K+ + + A  + + +   G  PN V YN +I G+C  G +  A  +  D
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           M + G++PN VT N+L+ G  ++N+      LL  M
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEM 363



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 4/253 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L  L+  +G+ P+    + L+       E+  + ++F  M   G   +V  ++T++N +C
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               V++++ L+ +M   G+ P VVTYN + HGL +  +++ A +  ++M+   V     
Sbjct: 209 TGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLV 268

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   I+GL K     EA  + + +           Y+ LIDG C+IG + TA ++   +
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM----LGCIR 242
              G+ PN VT N +I G+C   QM+ A  L  +M   G   N  TF +++    L C  
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRF 388

Query: 243 NNETSKVVELLHR 255
           ++    ++E+L R
Sbjct: 389 DSALLFIMEMLLR 401



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 55/93 (59%)

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+  L K  +++ ++++F  +   G+ P+V  ++ M++ FC  G++D A +LF  ME  G
Sbjct: 168 LLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVG 227

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           VAPN VT+N ++ G  +N    +  +   +M++
Sbjct: 228 VAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEK 260



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 42/67 (62%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A++LL+ M Q+G+ P+A  Y+ L +GFC  G+++ A ++   M   G   + +TY T
Sbjct: 703 MKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTT 762

Query: 61  LINGYCK 67
           LI+G+ K
Sbjct: 763 LIDGWHK 769


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 115/195 (58%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  + DL +  G  P+A VYS L+DG+CL G++++A  +F +M   G   NVV Y TL+
Sbjct: 521 DAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLV 580

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NGYCK   ++E L+L+ EML KGI+P+ + YN +  GLF   +   A   F EM  S +A
Sbjct: 581 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIA 640

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  + G  KN    EA  LF+ LR +  ++ I   + +I G+ +  ++E A +L
Sbjct: 641 INKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 700

Query: 183 FQSLPRVGLMPNVVT 197
           F S+ R GL+P VVT
Sbjct: 701 FASISRSGLVPCVVT 715



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 35/293 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M  +G  P+ F Y  +++G+   G +    +LF  M  +G   ++ T++ 
Sbjct: 344 IKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSV 403

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  Y     +++++ +++EM   G++P VVTY T+   L  I +++ A++ F++M    
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKCELG------ 159
           VA +   Y+  I G C +G +++A EL               F ++    C+LG      
Sbjct: 464 VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQ 523

Query: 160 --------------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                            YS L+DG C +GK+E A  +F ++   G+ PNVV Y  +++G+
Sbjct: 524 NIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C  G++D+   LF +M  KG+ P+ + +N ++ G      T       H M E
Sbjct: 584 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTE 636



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 129/253 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A    + MI +GV P+ + Y  LI GFC  G + +A+EL + +  NG   ++V +++
Sbjct: 449 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSS 508

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK   + ++ N++   ++ G  P  V Y+ L  G   + ++E AL++FD M  + 
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 568

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y T ++G CK G I E   LFR +     +     Y+ +IDGL   G+   A 
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK 628

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F  +   G+  N  TYNI++ GF  +   D+A  LF ++ A  V  + +T NT++ G 
Sbjct: 629 VKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 688

Query: 241 IRNNETSKVVELL 253
            +     +  +L 
Sbjct: 689 FQTRRVEEAKDLF 701



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 138/256 (53%), Gaps = 2/256 (0%)

Query: 3   EASRLLDLMIQRGV--RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A  LL +M + G    P+   Y+T+ID F   G++++A +LF  M   G   ++VTY++
Sbjct: 204 QADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 263

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + + ++     +M++KG+ P   TYN L +G     Q + A+++F EM+   
Sbjct: 264 VVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 323

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  T N  +  LCK G I EA ++F T+ +      + +Y  +++G    G L    
Sbjct: 324 ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMT 383

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +   G+ P++ T++++I  + N G +DKA  +F +M   GV P+ VT+ T++   
Sbjct: 384 DLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAAL 443

Query: 241 IRNNETSKVVELLHRM 256
            R  +    +E  ++M
Sbjct: 444 CRIGKMDDAMEKFNQM 459



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 120/253 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+QRG+ P+   YS+++   C    + +A      M   G + +  TYN 
Sbjct: 239 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNN 298

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY  T   +E++ ++ EM    I P VVT N L   L +  +++ A  +FD M    
Sbjct: 299 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKG 358

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y   ++G    G +V+  +LF  +        I  +S LI      G L+ A 
Sbjct: 359 QNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAM 418

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  +   G+ P+VVTY  +I   C  G+MD A + F  M  +GVAP+   ++ L+ G 
Sbjct: 419 IIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 478

Query: 241 IRNNETSKVVELL 253
             +    K  EL+
Sbjct: 479 CTHGSLLKAKELI 491



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 130/260 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + M   GV+P+   Y+T+I   C  G++D A E F  M   G   +   Y+ 
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    + ++  L  E+++ G+R  +V ++++ + L ++ ++  A  +FD   +  
Sbjct: 474 LIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVG 533

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  +DG C  G + +A  +F  +     E  +  Y  L++G CKIG+++   
Sbjct: 534 QHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGL 593

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G+ P+ + YNI+I G    G+   A   F +M   G+A N  T+N ++ G 
Sbjct: 594 SLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGF 653

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N    + + L   +   N
Sbjct: 654 FKNRCFDEAIFLFKELRAMN 673



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 38/265 (14%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL---------------------------- 42
           +++ G+R +  + + L+ GFC     D A ++                            
Sbjct: 141 LLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQG 200

Query: 43  -------FVSMDING---CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
                   + M   G   C  +VV Y T+I+ + K  DV ++ +L+ EM+ +GI P +VT
Sbjct: 201 KSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVT 260

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           Y+++ H L +   +  A     +M +  V  +  TYN  I G    G   EA  +F+ +R
Sbjct: 261 YSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 320

Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                  +   + L+  LCK GK++ A ++F ++   G  P+V +Y IM++G+   G + 
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV 380

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLM 237
              DLF  M   G+AP+  TF+ L+
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLI 405



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 3/227 (1%)

Query: 14  RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
           R + P +  Y+ L+D        + A   F  +   G   +++  N L+ G+C+ K  +E
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168

Query: 74  SLN-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV--AAETSTYNT 130
           +L+ L       G  P V +Y+ L   L +  +   A  L   M       + +   Y T
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID   K G + +A +LF+ +        +  YS ++  LCK   +  A    + +   G
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++P+  TYN +I+G+ + GQ  +A  +F +M    + P+ VT N LM
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 67/119 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   L   M+Q+G++P+  +Y+ +IDG  + G    A+  F  M  +G   N  TYN 
Sbjct: 589 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNI 648

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           ++ G+ K +  +E++ L+ E+ +  ++  ++T NT+  G+F+  +VE A  LF  +  S
Sbjct: 649 VLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 707



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 16/164 (9%)

Query: 109 ALKLFDEM----QHSDVAAETS-TYNTFIDGLCKNGYIVEAAELF--RTLRV-LKCELGI 160
           A+ LF+      Q   V + TS TY   +D  C   +  E A  F  + LR  L+ ++ I
Sbjct: 94  AVALFNRAASRAQGPRVLSPTSHTYAILMD-CCTRAHRPELALAFFGQLLRTGLRVDIII 152

Query: 161 EAYSCLIDGLCKIGKLETAWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
             +  L+ G C+  + + A + L    P +G +P+V +Y+I++   C+ G+  +A DL L
Sbjct: 153 ANH--LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL-L 209

Query: 220 DMEAKGVA---PNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            M A+G A   P+ V + T++    +  + +K  +L   M +R 
Sbjct: 210 RMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRG 253


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 141/279 (50%), Gaps = 22/279 (7%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +LD M+ +G+ PNA+ Y+ ++DG C    +  AR L   M  NG   + V Y+TL+
Sbjct: 346 EARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLL 405

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC    V E+ ++  EM+  G +P   T NTL H L++  +   A ++  +M      
Sbjct: 406 HGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQ 465

Query: 123 AETSTYNTFIDGLCKNGYIVEAAEL-----------------FRTL-----RVLKCELGI 160
            +T T N  ++GLC+NG + +A+E+                 F +L      V  C    
Sbjct: 466 PDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDG 525

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             Y+ LI+GLCK+G+LE A + F  +    L P+ VTY+  I  FC  G++  A  +  D
Sbjct: 526 ITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKD 585

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           ME  G +    T+N L+LG   NN+  ++  L   M E+
Sbjct: 586 MERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEK 624



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 57/310 (18%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+DLM++ GV P+   YSTL+ G+C  G++  A+ +   M  NGC  N  T NT
Sbjct: 379 LSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNT 438

Query: 61  L-----------------------------------INGYCKTKDVEESLNLYSEMLSKG 85
           L                                   +NG C+  +++++  + SEM + G
Sbjct: 439 LLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNG 498

Query: 86  IR----------------------PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
                                   P  +TY TL +GL ++ ++E A K F EM   ++  
Sbjct: 499 PTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRP 558

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           ++ TY+TFI   CK G I  A  + + +    C   ++ Y+ LI GL    ++   + L 
Sbjct: 559 DSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLK 618

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+ P++ TYN +I   C  G+   A  L  +M  KG++PN  +F  L+    ++
Sbjct: 619 DEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKS 678

Query: 244 NETSKVVELL 253
           ++     EL 
Sbjct: 679 SDFKVACELF 688



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 7/260 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC-MHNVVTYNT 60
           D A +L + M Q+G  PN F    L+ G C  G + +A EL    + N C + N V YNT
Sbjct: 167 DHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELV--NNNNSCRIANRVVYNT 224

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +C+ +   E+  L   M   G+ P VVT+N+    L    +V  A ++F +MQ   
Sbjct: 225 LVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDA 284

Query: 121 ----VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                     T+N  + G CK+G + +A  L  T++ +     +E Y+  + GL + G+L
Sbjct: 285 ELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGEL 344

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  +   +   G+ PN  TYNIM+ G C +  +  A  L   M   GV P+ V ++TL
Sbjct: 345 LEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTL 404

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G     +  +   +LH M
Sbjct: 405 LHGYCSRGKVFEAKSVLHEM 424



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 7/257 (2%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           S L   M+   V P  + ++ LI   C +   D A +LF  M   GC  N  T   L+ G
Sbjct: 135 SWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRG 194

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
            C+   V+++L L +   S  I   VV YNTL            A +L + M    V  +
Sbjct: 195 LCRAGLVKQALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAERLVERMNELGVLPD 253

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-----AYSCLIDGLCKIGKLETA 179
             T+N+ I  LC+ G ++EA+ +FR ++ +  ELG+       ++ ++ G CK G +  A
Sbjct: 254 VVTFNSRISALCRAGKVMEASRIFRDMQ-MDAELGLPRPNVVTFNLMLKGFCKHGMMGDA 312

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L +++ +VG   ++  YNI + G   +G++ +A  +  +M AKG+ PN  T+N +M G
Sbjct: 313 RGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDG 372

Query: 240 CIRNNETSKVVELLHRM 256
             RN+  S    L+  M
Sbjct: 373 LCRNHMLSDARGLMDLM 389



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 25/262 (9%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING------------ 50
           EA  +L  M ++  +P+    + +++G C  GE+D+A E+   M  NG            
Sbjct: 451 EAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFAS 510

Query: 51  ----------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
                     C+ + +TY TLING CK   +EE+   + EML+K +RP  VTY+T     
Sbjct: 511 LINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSF 570

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
            +  ++  A ++  +M+ +  +    TYN  I GL  N  I E   L   ++       I
Sbjct: 571 CKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDI 630

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF-- 218
             Y+ +I  LC+ GK + A  L   +   G+ PNV ++ I+I  F        A +LF  
Sbjct: 631 CTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEV 690

Query: 219 -LDMEAKGVAPNCVTFNTLMLG 239
            L++  +  A   + FN L+ G
Sbjct: 691 ALNICGRKEALYSLMFNELLAG 712



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 4/227 (1%)

Query: 3   EASRLL-DLMIQRGV---RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           EASR+  D+ +   +   RPN   ++ ++ GFC  G +  AR L  +M   G   ++  Y
Sbjct: 272 EASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECY 331

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N  + G  +  ++ E+  +  EM++KGI P   TYN +  GL   H +  A  L D M  
Sbjct: 332 NIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMR 391

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + V  +T  Y+T + G C  G + EA  +   +    C+      + L+  L K G+   
Sbjct: 392 NGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLE 451

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           A E+ Q +      P+ VT NI+++G C +G++DKA ++  +M   G
Sbjct: 452 AEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNG 498



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 117/259 (45%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +    M+ + +RP++  Y T I  FC  G+I  A  +   M+ NGC   + TYN 
Sbjct: 541 LEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNA 600

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G      + E   L  EM  KGI P + TYN +   L E  + + A+ L  EM    
Sbjct: 601 LILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKG 660

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++   S++   I    K+     A ELF     + C      YS + + L   G+L  A 
Sbjct: 661 ISPNVSSFKILIKAFSKSSDFKVACELFEVALNI-CGRKEALYSLMFNELLAGGQLSEAK 719

Query: 181 ELFQ-SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ELF+ SL R   + N + Y  +I   C D ++  A+ L   +  KG   +  +F  ++ G
Sbjct: 720 ELFEVSLDRYLTLKNFM-YKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDG 778

Query: 240 CIRNNETSKVVELLHRMDE 258
             +     +  EL  RM E
Sbjct: 779 LSKRGNKRQADELAKRMME 797



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 1/171 (0%)

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           + P++  YN L       H+      L+ +M  + VA +T T+N  I  LC++     A 
Sbjct: 111 LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHAL 170

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +LF  +    C         L+ GLC+ G ++ A EL  +      + N V YN ++  F
Sbjct: 171 QLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNN-NNSCRIANRVVYNTLVSRF 229

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C +   ++A  L   M   GV P+ VTFN+ +    R  +  +   +   M
Sbjct: 230 CREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM 280



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 2/122 (1%)

Query: 135 LCKNGYIVEAAELFRTLRVLKCELG--IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           L + G++ +A   F++LR     L   +  Y+ L+    +  +      L+  +    + 
Sbjct: 88  LAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVA 147

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P   T+N++IH  C     D A  LF  M  KG  PN  T   L+ G  R     + +EL
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL 207

Query: 253 LH 254
           ++
Sbjct: 208 VN 209


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 133/258 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA +LLD M+ +G+ PN   Y+T+I+     G ++ +  +   M   GC  N+ T+ +L
Sbjct: 263 EEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSL 322

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+       E+L+ +  M+ +G+ P VV YN L HGL     +  A+ +F++M+ +  
Sbjct: 323 IKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGC 382

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY+  IDG  K G +  A+E++  +    C   + AY+C++D LC+      A+ 
Sbjct: 383 CPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYC 442

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L +++      PN VT+N  I G C  G++D A  +F  M   G  PN  T+N L+   +
Sbjct: 443 LIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLL 502

Query: 242 RNNETSKVVELLHRMDER 259
           ++    +   L+  M+ R
Sbjct: 503 KDRRFGEAFGLVKDMEHR 520



 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 131/255 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA    D MI+ GV PN   Y+ L+ G C    +  A  +F  M+INGC  NV TY+ LI
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY K  D++ +  +++ M++ G  P VV Y  +   L        A  L + MQ  +  
Sbjct: 394 DGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCP 453

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T T+NTFI GLC +G +  A ++F  +    C      Y+ L+D L K  +   A+ L
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G+  N+VTYN +I+G+C  G + +A +L   M  +G  P+ +T N ++    +
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573

Query: 243 NNETSKVVELLHRMD 257
             + +  ++L+ R+ 
Sbjct: 574 QGKVNIAIQLMDRLS 588



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 128/286 (44%), Gaps = 30/286 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD---------INGC 51
           +D A +LL  M  +G  P+   Y+TLI   C  G++  AREL +S           ING 
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGV 256

Query: 52  MH---------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                                  NV++Y T+IN      +VE SL + ++M ++G  P +
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            T+ +L  G F       AL  +D M    V      YN  + GLC    + +A  +F  
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           + +  C   +  YS LIDG  K G L+ A E++  +   G  PNVV Y  M+   C +  
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            ++A+ L  +M+ +   PN VTFNT + G   +      +++  +M
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 120/253 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D AS + + MI  G  PN   Y+ ++D  C     ++A  L  +M +  C  N VT+NT
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G C +  V+ ++ ++ +M + G  P   TYN L   L +  +   A  L  +M+H  
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYNT I G C  G + EA EL   + V   +      + +ID  CK GK+  A 
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAI 581

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   L      P+++ Y  +I G C    +++A      M ++G++PN  T+N L+   
Sbjct: 582 QLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641

Query: 241 IRNNETSKVVELL 253
             N   S  V+ L
Sbjct: 642 FSNMGHSGAVQFL 654



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M   G  PN   YS LIDG+   G++D A E++  M  +GC  NVV Y  
Sbjct: 367 LGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTC 426

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  C+     ++  L   M  +   P  VT+NT   GL    +V+ A+K+FD+M +S 
Sbjct: 427 MVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T+TYN  +D L K+    EA  L + +     EL +  Y+ +I G C  G L  A 
Sbjct: 487 CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEAL 546

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G  P+ +T NI+I  +C  G+++ A  L   + A    P+ + + +L+ G 
Sbjct: 547 ELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGI 606

Query: 241 IRNNETSKVVELLHRM 256
             +    + +  L RM
Sbjct: 607 CTHIGVEEAIVYLRRM 622



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 5/246 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+ PN F Y+ L+   C    +D A +L V M   GC  + V+Y TLI+  CK   
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E+       L+    P+V  YN L +G+ + +  E A +L DEM +  +     +Y T
Sbjct: 232 VKEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+ L   G +  +  +   +    C   +  ++ LI G    G    A + +  + R G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++PNVV YN ++HG C+   +  A  +F  ME  G  PN  T++ L+ G  +  +     
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 251 ELLHRM 256
           E+ + M
Sbjct: 407 EVWNWM 412



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M  RG  PN   +++LI GF L G    A + +  M   G + NVV YN L++G C
Sbjct: 303 VLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLC 362

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             + + ++++++++M   G  P V TY+ L  G  +   ++ A ++++ M          
Sbjct: 363 SKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y   +D LC+N    +A  L   ++V  C      ++  I GLC  G+++ A ++F  +
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  PN  TYN ++     D +  +A  L  DME +G+  N VT+NT++ G       
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542

Query: 247 SKVVELLHRMDER 259
            + +ELL +M  R
Sbjct: 543 GEALELLGKMVVR 555



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 5/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD    LL  M   G+  +  ++ ++I  +   G  ++A + F  M        V  YN 
Sbjct: 92  MDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNH 151

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++        +    +YS M   G+ P V TYN L   L + ++V+ A KL  EM    
Sbjct: 152 ILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG 211

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y T I  LCK G + EA EL      +     +  Y+ LI+G+CK    E A+
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAF 266

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ PNV++Y  +I+   + G ++ +  +   M A+G +PN  TF +L+ G 
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326

Query: 241 IRNNETSKVVELLHRM 256
                + + ++   RM
Sbjct: 327 FLKGGSHEALDFWDRM 342



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 5/242 (2%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+P   +Y+ ++D             ++ +M  +G   NV TYN L+   CK   V+ + 
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EM SKG  P  V+Y TL   L ++ +V+ A +L      S        YN  I+G+
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPS-----VPVYNALINGV 256

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK     EA +L   +     +  + +Y+ +I+ L   G +E +  +   +   G  PN+
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
            T+  +I GF   G   +A D +  M  +GV PN V +N LM G          V + ++
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 256 MD 257
           M+
Sbjct: 377 ME 378



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 5/225 (2%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
            +  +     Y  +I+      E+D  + L   M + G   +   + ++I  Y +    E
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           ++L  +  M    ++PTV  YN +   L + ++ +    ++  M+   +     TYN  +
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
             LCKN  +  A +L   +    C+    +Y+ LI  LCK+GK++ A EL  S       
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS-----FT 243

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           P+V  YN +I+G C +   ++A  L  +M  KG+ PN +++ T++
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTII 288



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 84/170 (49%)

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           SK  + T +TY  +   L    +++    L  +M+   ++     + + I    + G   
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A + F  ++  + +  ++ Y+ ++D L    + +    ++ ++ + G+ PNV TYNI++
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
              C + ++D AH L ++M +KG  P+ V++ TL+    +  +  +  EL
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 1/157 (0%)

Query: 104 HQVEHALKLFDEMQHSDVAAETS-TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
           H +  AL+ F  + +S     T  TY   I+ L     +     L + +++       + 
Sbjct: 54  HDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDL 113

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           +  +I    + G  E A + F  +    + P V  YN ++    ++ +    + ++ +M+
Sbjct: 114 FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMK 173

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             G+ PN  T+N L+    +NN      +LL  M  +
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSK 210


>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
          Length = 374

 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 129/251 (51%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++LD  +  GV PN   Y  LI+GFC  G+++ A  L   M   G   N + +NT+I+GY
Sbjct: 94  KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 153

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C+   V+++L + + M   G+   + TYNTL  GL  +++++ A  L   M    V    
Sbjct: 154 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY 213

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY T I   CK+G +VEA  LFR +        +  Y+ +I G  K G +  A    + 
Sbjct: 214 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKE 273

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           + + G +P+V TY  ++HG C +G++D A  LF +M+ +G  PN V +  L+ G  +   
Sbjct: 274 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 333

Query: 246 TSKVVELLHRM 256
           +    +L   M
Sbjct: 334 SEAAFQLYDDM 344



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 24/266 (9%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD---VEESL 75
           +    S ++DG C +G +D AR L   M  +G   N + YN+L++ Y + KD   V+E L
Sbjct: 13  SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 72

Query: 76  NL---------------------YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
            +                       E +  G+ P   TY  L +G  +I Q+E A  L  
Sbjct: 73  EIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 132

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
           +MQ   V      +NT IDG C+ G + +A ++   +  +  EL I  Y+ L  GLC++ 
Sbjct: 133 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVN 192

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +L+ A  L   +  +G++PN VTY  +I   C DG M +A  LF +M  KG  P+ VT+N
Sbjct: 193 RLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN 252

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            ++ G  +     +       M+++ 
Sbjct: 253 VMIHGYAKKGSIREAERFRKEMEKKG 278



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 24/284 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING---------- 50
           +D+A RLLD M + GV  NA  Y++L+D +    +  R +E+   M+  G          
Sbjct: 30  VDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGDGTC 89

Query: 51  ---------CMHNVV-----TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
                    C+ N V     TY  LING+CK   +E +  L ++M  +G+    + +NT+
Sbjct: 90  GGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 149

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
             G      V+ ALK+   M+   V  +  TYNT   GLC+   + EA  L   +  +  
Sbjct: 150 IDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGV 209

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
                 Y+ LI   CK G +  A  LF+ +   G  P+VVTYN+MIHG+   G + +A  
Sbjct: 210 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAER 269

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
              +ME KG  P+  T+ +L+ G   N +    ++L   M +R 
Sbjct: 270 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG 313



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 119/237 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  LL  M  +GV  N  +++T+IDG+C  G +D A ++  +M+  G   ++ TYNT
Sbjct: 124 MEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNT 183

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G C+   ++E+  L   M+  G+ P  VTY TL     +   +  A +LF EM    
Sbjct: 184 LACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 243

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  I G  K G I EA    + +        +  Y+ L+ G C  GK++ A 
Sbjct: 244 ATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 303

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           +LF+ + + G  PNVV Y  +I G   +G+ + A  L+ DM   G+ P+   ++ L+
Sbjct: 304 KLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 360



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 112/212 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A ++   M + GV  + + Y+TL  G C    +D A+ L   M   G + N VTY T
Sbjct: 159 VDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTT 218

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK  D+ E+  L+ EM  KG  P+VVTYN + HG  +   +  A +   EM+   
Sbjct: 219 LISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKG 278

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY + + G C NG +  A +LF  ++    E  + AY+ LI GL K G+ E A+
Sbjct: 279 FVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAF 338

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           +L+  + + GL+P+   Y+ ++     D + D
Sbjct: 339 QLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 370


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 3/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++   L   M+++   PN   +  L+  FC  G ++RA ++   M  +GC  N    N +
Sbjct: 298 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 357

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   V+++    + M S G  P  ++Y T+  GL    + E A +L  EM   + 
Sbjct: 358 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 417

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+NTFI  LC+ G I +A  L   +    CE+ I  Y+ L++G C  G++++A E
Sbjct: 418 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 477

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF S+P     PN +TY  ++ G CN  ++D A +L  +M  K  APN VTFN L+    
Sbjct: 478 LFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 534

Query: 242 RNNETSKVVELLHRMDE 258
           +     + +EL+ +M E
Sbjct: 535 QKGLMDEAIELVEQMME 551



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 3/255 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            +A+R+L    + G   + F Y+TL+ G+C  G++D AR L  SM +     +  TY  +
Sbjct: 126 SDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPI 182

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C    V E+L+L  +ML +G +P+VVTY  L   + +      A+++ DEM+    
Sbjct: 183 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 242

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TYN  I+G+C+ G + +A E    L     +    +Y+ ++ GLC   + E   E
Sbjct: 243 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 302

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +     MPN VT+++++  FC  G +++A  +   M   G A N    N ++    
Sbjct: 303 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 362

Query: 242 RNNETSKVVELLHRM 256
           +        + L+ M
Sbjct: 363 KQGRVDDAFQFLNNM 377



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 3/255 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A+RL+D    RG  P+ ++ + LI   C  G    A  +  + + +G   +V  YNTL+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYC+   ++ +  L + M    + P   TY  +  GL +  +V  AL L D+M H    
Sbjct: 152 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   ++ +CK+    +A E+   +R   C   I  Y+ +I+G+C+ G+++ A E 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L   G  P+ V+Y  ++ G C   + +   +LF +M  K   PN VTF+ L+    R
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 243 NNETSKVVELLHRMD 257
                + +++L +M 
Sbjct: 329 GGMVERAIQVLEQMS 343



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 125/256 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LLD M+ RG +P+   Y+ L++  C +    +A E+   M   GC  N+VTYN +I
Sbjct: 194 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 253

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+   V+++    + + S G +P  V+Y T+  GL    + E   +LF EM   +  
Sbjct: 254 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 313

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  +   C+ G +  A ++   +    C       + +I+ +CK G+++ A++ 
Sbjct: 314 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 373

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
             ++   G  P+ ++Y  ++ G C   + + A +L  +M  K   PN VTFNT +    +
Sbjct: 374 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 433

Query: 243 NNETSKVVELLHRMDE 258
                +   L+ +M E
Sbjct: 434 KGLIEQATMLIEQMSE 449



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 132/293 (45%), Gaps = 38/293 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M  +G  PN   Y+ +I+G C  G +D ARE    +   G   + V+Y T++
Sbjct: 229 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 288

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C  K  E+   L++EM+ K   P  VT++ L         VE A+++ ++M     A
Sbjct: 289 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCA 348

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A T+  N  I+ +CK G + +A +    +    C     +Y+ ++ GLC+  + E A EL
Sbjct: 349 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 408

Query: 183 FQSLPRVGLMP-----------------------------------NVVTYNIMIHGFCN 207
            + + R    P                                   N+VTYN +++GFC 
Sbjct: 409 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 468

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G++D A +LF  M  K   PN +T+ TL+ G           ELL  M +++
Sbjct: 469 QGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 518



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 130/259 (50%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A+ L++ M + G   N   Y+ L++GFC+ G +D A ELF SM    C  N +TY T
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTT 493

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C  + ++ +  L +EML K   P VVT+N L     +   ++ A++L ++M    
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT +DG+ K+    EA EL   L        I  YS +I  L +  ++E A 
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  +  +G+ P  V YN ++   C     D A D F  M + G  PN +T+ TL+ G 
Sbjct: 614 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 673

Query: 241 IRNNETSKVVELLHRMDER 259
              +   +  +LL  +  R
Sbjct: 674 ANEDFLKETRDLLRELCSR 692



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 3/255 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  LL  M+++   PN   ++T I   C  G I++A  L   M  +GC  N+VTYN L
Sbjct: 403 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 462

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG+C    V+ +L L+  M  K   P  +TY TL  GL    +++ A +L  EM   D 
Sbjct: 463 VNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC 519

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    T+N  +   C+ G + EA EL   +    C   +  Y+ L+DG+ K    E A E
Sbjct: 520 APNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALE 579

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   L   G+ P++VTY+ +I     + ++++A  +F  ++  G+ P  V +N ++L   
Sbjct: 580 LLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 639

Query: 242 RNNETSKVVELLHRM 256
           +   T   ++    M
Sbjct: 640 KRCNTDGAIDFFAYM 654



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+  M    V P+A+ Y+ +I G C  G +  A  L   M   GC  +VVTY  
Sbjct: 160 LDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTV 216

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK+    +++ +  EM +KG  P +VTYN + +G+    +V+ A +  + +    
Sbjct: 217 LLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG 276

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T +Y T + GLC      +  ELF  +    C      +  L+   C+ G +E A 
Sbjct: 277 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 336

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + +   G   N    NI+I+  C  G++D A     +M + G +P+ +++ T++ G 
Sbjct: 337 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 396

Query: 241 IRNNETSKVVELLHRMDERN 260
            R        ELL  M  +N
Sbjct: 397 CRAERWEDAKELLKEMVRKN 416



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 113/219 (51%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L+L      +PN   Y+TL+ G C    +D A EL   M    C  NVVT+N L++ +C+
Sbjct: 476 LELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 535

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              ++E++ L  +M+  G  P ++TYNTL  G+ +    E AL+L   +  + V+ +  T
Sbjct: 536 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 595

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y++ I  L +   + EA ++F  ++ L        Y+ ++  LCK    + A + F  + 
Sbjct: 596 YSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV 655

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
             G MPN +TY  +I G  N+  + +  DL  ++ ++GV
Sbjct: 656 SNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 128/245 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+A  Y+ LI G    G    A ELF +M   GC+ +   YNT+I+G+CK+  V ++
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L  EM +KG  PTVVTY ++  GL +I +++ A  LF+E +   +      Y++ IDG
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
             K G I EA  +   L        +  ++CL+D L K  ++  A   FQS+  +   PN
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY+I+IHG C   + +KA   + +M+ +G  PN  T+ T++ G  +     +   L  
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818

Query: 255 RMDER 259
           +  E+
Sbjct: 819 KFKEK 823



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 128/252 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M ++G   +   Y+T+IDGFC +G++++A +L   M   G    VVTY ++I
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  SKGI   VV Y++L  G  ++ +++ A  + +E+    + 
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 721

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +D L K   I EA   F++++ LKC      YS LI GLCKI K   A+  
Sbjct: 722 PNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVF 781

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +Q + + G  PNV TY  MI G    G + +A  LF   + KG   +   +N ++ G   
Sbjct: 782 WQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSN 841

Query: 243 NNETSKVVELLH 254
            N  S    L  
Sbjct: 842 ANRASDAYRLFE 853



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 129/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + +  +  RP+A  Y +LI+G    G +D A +L+  M     + N V Y +
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  + K    E+   +Y+EML  G  P ++  NT    +F+  ++E    LF E+++  
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y   I GL K G+  EA ELF T++   C L   AY+ +IDG CK GK+  A+
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +   G  P VVTY  +I G     ++D+A+ LF + ++KG+  N V +++L+ G
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L + M+     PNA VY++LI  F   G  +   +++  M   GC  +++  NT
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  ++E+   L+ E+ + G  P   +Y  L HGL +      A +LF  M+   
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T  YNT IDG CK+G + +A +L   ++    E  +  Y  +IDGL KI +L+ A+
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G+  NVV Y+ +I GF   G++D+A+ +  ++  KG+ PN  T+N L+   
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  E S+ +     M +
Sbjct: 735 VKAEEISEALVCFQSMKD 752



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M    + P+  +Y+  ID F   G++D A + F  M  NG + + VTY +
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK   + E++ L+  M      P    YNT+  G     + E A  L +  +   
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YN  +  L + G + EA + F  ++       +  Y+ +ID LCK GKLETA 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETAL 429

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +  ++   GL PNV+T NIM+   C   ++D A  +F  ++ K   P+ VT+ +L+ G 
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 241 IRNNETSKVVELLHRMDERN 260
            R+    +  +L  +M + N
Sbjct: 490 GRHGRVDEAYKLYEQMLDAN 509



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 117/231 (50%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D M   G+ PN    + ++D  C    +D A  +F  +D   C  + VTY +LI G  + 
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             V+E+  LY +ML     P  V Y +L    F+  + E   K+++EM     + +    
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLL 552

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT++D + K G I +   LF+ ++ L       +Y+ LI GL K G    A+ELF ++  
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE 612

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            G + +   YN +I GFC  G+++KA+ L  +M+ KG  P  VT+ +++ G
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 133/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +  + M +  + PN   Y+ +ID  C  G+++ A  +  +M   G   NV+T N 
Sbjct: 391 VDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNI 449

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++ +++  +  K  RP  VTY +L  GL    +V+ A KL+++M  ++
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y + I    K G   +  +++  +  L C   +   +  +D + K G++E   
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LFQ +  +G +P+  +Y I+IHG    G   +A++LF  M+ +G   +   +NT++ G 
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ + +K  +LL  M  +
Sbjct: 630 CKSGKVNKAYQLLEEMKTK 648



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 108/225 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +LL+ M  +G  P    Y ++IDG      +D A  LF      G   NVV Y++
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSS 694

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   ++E+  +  E++ KG+ P V T+N L   L +  ++  AL  F  M+   
Sbjct: 695 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK 754

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  I GLCK     +A   ++ ++    +  +  Y+ +I GL K G +  A 
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEAD 814

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            LF+     G + +   YN +I G  N  +   A+ LF +   KG
Sbjct: 815 TLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA   +  M +   RP    Y+ LI     + + D    LF  M   G   NV  + T
Sbjct: 181 LREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTT 240

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  + +   V+ +L+L  EM S  + P VV YN       +  +V+ A K F EM+ + 
Sbjct: 241 LIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANG 300

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I  LCK   + EA ELF  +   K      AY+ +I G    GK E A+
Sbjct: 301 LVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L +   R G +P+VV+YN ++      GQ+D+A   F +M+ K   PN  T+N ++
Sbjct: 361 SLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMI 416



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 91/179 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +++ ++Q+G+ PN + ++ L+D      EI  A   F SM    C  N +TY+ 
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK +   ++   + EM  +G +P V TY T+  GL +   +  A  LF++ +   
Sbjct: 765 LIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG 824

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             A+++ YN  I+GL       +A  LF   R+  C +  +    L+D L K   +E A
Sbjct: 825 GVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 3/202 (1%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            Y  LI     ++D +  L L+ +M   G    V  + TL        +V+ AL L DEM
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           + + +  +   YN  ID   K G +  A + F  ++     L    Y+ +I  LCK  +L
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRL 321

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A ELF+ + +   +P    YN MI G+   G+ + A+ L      KG  P+ V++N +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
            L C+      +V E L + +E
Sbjct: 382 -LSCL--GRKGQVDEALKKFEE 400



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 97/238 (40%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
            Y++L+     T + +   ++   M I G   +  T   ++  + K++ + E+      M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
                RP    Y  L   L      +  L LF +MQ    A     + T I    + G +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
             A  L   ++    E  +  Y+  ID   K GK++ AW+ F  +   GL+ + VTY  M
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           I   C   ++++A +LF  M+     P    +NT+++G     +      LL R   +
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRK 369



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 62/135 (45%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   YS LI G C   + ++A   +  M   G   NV TY T+I+G  K  ++ E+  L
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +   KG       YN +  GL   ++   A +LF+E +    +  T T    +D L K
Sbjct: 817 FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHK 876

Query: 138 NGYIVEAAELFRTLR 152
              I +AA +   LR
Sbjct: 877 AECIEQAAIVGAVLR 891


>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
          Length = 462

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 48/308 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAREL--------------FVSM 46
           MD+A    + MI +GV P+ + Y  LI GFC  G + +A+EL              F   
Sbjct: 115 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 174

Query: 47  DIN---------------------GCMHNVVTYNTLINGYCKTKDVEESL---------- 75
            IN                     G   + V YN L++GYC    +E++L          
Sbjct: 175 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 234

Query: 76  ---NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
              N+  EML KGI+P+ + YN +  GLFE  +   A   F EM  S +A    TY+  +
Sbjct: 235 IEPNVVGEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 294

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
            GL KN    EA  LF+ LR +  ++ I   + +I G+ +  ++E A +LF S+ R GL+
Sbjct: 295 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 354

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P  VTY+IMI     +G +++A D+F  M+  G  P+    N ++   ++ NE  +    
Sbjct: 355 PCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 414

Query: 253 LHRMDERN 260
           L ++DERN
Sbjct: 415 LSKIDERN 422



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 126/231 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E   + D M  +G  P+ F Y+ +++G+   G +    +LF  M  +G   ++ T+N 
Sbjct: 10  IKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNV 69

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  Y     +++++ +++EM   G++P VVTY T+   L  I +++ A++ F++M    
Sbjct: 70  LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 129

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   Y+  I G C +G +++A EL   +      L I  +  +I+ LCK+G++  A 
Sbjct: 130 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 189

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
            +F     VGL P+ V YN+++ G+C  G+M+KA  +F  M + G+ PN V
Sbjct: 190 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 240



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 65/122 (53%)

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G I E  ++F T+ +      + +Y+ +++G    G L    +LF  +   G+ P+
Sbjct: 4   LCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 63

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           + T+N++I  + N G +DKA  +F +M   GV P+ VT+ T++    R  +    +E  +
Sbjct: 64  IYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFN 123

Query: 255 RM 256
           +M
Sbjct: 124 QM 125



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 62/138 (44%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA  L   +    V+ +    +T+I G   T  ++ A++LF S+  +G +   VTY+ +
Sbjct: 304 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIM 363

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    K   VEE+ +++S M + G  P     N +   L + +++  A     ++   + 
Sbjct: 364 ITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 423

Query: 122 AAETSTYNTFIDGLCKNG 139
           + E  T    +D     G
Sbjct: 424 SLEHLTAMLLVDLFSSKG 441


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 128/245 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+A  Y+ LI G    G    A ELF +M   GC+ +   YNT+I+G+CK+  V ++
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L  EM +KG  PTVVTY ++  GL +I +++ A  LF+E +   +      Y++ IDG
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
             K G I EA  +   L        +  ++CL+D L K  ++  A   FQS+  +   PN
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY+I+IHG C   + +KA   + +M+ +G  PN  T+ T++ G  +     +   L  
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818

Query: 255 RMDER 259
           +  E+
Sbjct: 819 KFKEK 823



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 128/252 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M ++G   +   Y+T+IDGFC +G++++A +L   M   G    VVTY ++I
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  SKGI   VV Y++L  G  ++ +++ A  + +E+    + 
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 721

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +D L K   I EA   F++++ LKC      YS LI GLCKI K   A+  
Sbjct: 722 PNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVF 781

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +Q + + G  PNV TY  MI G    G + +A  LF   + KG   +   +N ++ G   
Sbjct: 782 WQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSN 841

Query: 243 NNETSKVVELLH 254
            N  S    L  
Sbjct: 842 ANRASDAYRLFE 853



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 129/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + + +  +  RP+A  Y +LI+G    G +D A +L+  M     + N V Y +
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  + K    E+   +Y+EML  G  P ++  NT    +F+  ++E    LF E+++  
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y   I GL K G+  EA ELF T++   C L   AY+ +IDG CK GK+  A+
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +   G  P VVTY  +I G     ++D+A+ LF + ++KG+  N V +++L+ G
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L + M+     PNA VY++LI  F   G  +   +++  M   GC  +++  NT
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  ++E+   L+ E+ + G  P   +Y  L HGL +      A +LF  M+   
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T  YNT IDG CK+G + +A +L   ++    E  +  Y  +IDGL KI +L+ A+
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G+  NVV Y+ +I GF   G++D+A+ +  ++  KG+ PN  T+N L+   
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  E S+ +     M +
Sbjct: 735 VKAEEISEALVCFQSMKD 752



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M    + P+  +Y+  ID F   G++D A + F  M  NG + + VTY +
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK   + E++ L+  M      P    YNT+  G     + E A  L +  +   
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YN  +  L + G + EA + F  ++       +  Y+ +ID LCK GKLETA 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETAL 429

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +  ++   GL PNV+T NIM+   C   ++D A  +F  ++ K   P+ VT+ +L+ G 
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 241 IRNNETSKVVELLHRMDERN 260
            R+    +  +L  +M + N
Sbjct: 490 GRHGRVDEAYKLYEQMLDAN 509



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 117/231 (50%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D M   G+ PN    + ++D  C    +D A  +F  +D   C  + VTY +LI G  + 
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             V+E+  LY +ML     P  V Y +L    F+  + E   K+++EM     + +    
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLL 552

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT++D + K G I +   LF+ ++ L       +Y+ LI GL K G    A+ELF ++  
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE 612

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            G + +   YN +I GFC  G+++KA+ L  +M+ KG  P  VT+ +++ G
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 133/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +  + M +  + PN   Y+ +ID  C  G+++ A  +  +M   G   NV+T N 
Sbjct: 391 VDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNI 449

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  CK + ++++ +++  +  K  RP  VTY +L  GL    +V+ A KL+++M  ++
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y + I    K G   +  +++  +  L C   +   +  +D + K G++E   
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LFQ +  +G +P+  +Y I+IHG    G   +A++LF  M+ +G   +   +NT++ G 
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGF 629

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ + +K  +LL  M  +
Sbjct: 630 CKSGKVNKAYQLLEEMKTK 648



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 108/225 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +LL+ M  +G  P    Y ++IDG      +D A  LF      G   NVV Y++
Sbjct: 635 VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSS 694

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   ++E+  +  E++ KG+ P V T+N L   L +  ++  AL  F  M+   
Sbjct: 695 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK 754

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  I GLCK     +A   ++ ++    +  +  Y+ +I GL K G +  A 
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEAD 814

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            LF+     G + +   YN +I G  N  +   A+ LF +   KG
Sbjct: 815 TLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA   +  M +   RP    Y+ LI     + + D    LF  M   G   NV  + T
Sbjct: 181 LREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTT 240

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  + +   V+ +L+L  EM S  + P VV YN       +  +V+ A K F EM+ + 
Sbjct: 241 LIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANG 300

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I  LCK   + EA ELF  +   K      AY+ +I G    GK E A+
Sbjct: 301 LVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L +   R G +P+VV+YN ++      GQ+D+A   F +M+ K   PN  T+N ++
Sbjct: 361 SLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMI 416



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 91/179 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +++ ++Q+G+ PN + ++ L+D      EI  A   F SM    C  N +TY+ 
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSI 764

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK +   ++   + EM  +G +P V TY T+  GL +   +  A  LF++ +   
Sbjct: 765 LIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG 824

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
             A+++ YN  I+GL       +A  LF   R+  C +  +    L+D L K   +E A
Sbjct: 825 GVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 3/202 (1%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            Y  LI     ++D +  L L+ +M   G    V  + TL        +V+ AL L DEM
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           + + +  +   YN  ID   K G +  A + F  ++     L    Y+ +I  LCK  +L
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRL 321

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A ELF+ + +   +P    YN MI G+   G+ + A+ L      KG  P+ V++N +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
            L C+      +V E L + +E
Sbjct: 382 -LSCL--GRKGQVDEALKKFEE 400



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 97/238 (40%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
            Y++L+     T + +   ++   M I G   +  T   ++  + K++ + E+      M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
                RP    Y  L   L      +  L LF +MQ    A     + T I    + G +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
             A  L   ++    E  +  Y+  ID   K GK++ AW+ F  +   GL+ + VTY  M
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           I   C   ++++A +LF  M+     P    +NT+++G     +      LL R   +
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRK 369



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 62/135 (45%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   YS LI G C   + ++A   +  M   G   NV TY T+I+G  K  ++ E+  L
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +   KG       YN +  GL   ++   A +LF+E +    +  T T    +D L K
Sbjct: 817 FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHK 876

Query: 138 NGYIVEAAELFRTLR 152
              I +AA +   LR
Sbjct: 877 AECIEQAAIVGAVLR 891


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 133/258 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA +LLD M+ +G+ PN   Y+T+I+     G ++ +  +   M   GC  N+ T+ +L
Sbjct: 263 EEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSL 322

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+       E+L+ +  M+ +G+ P VV YN L HGL     +  A+ +F++M+ +  
Sbjct: 323 IKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGC 382

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY+  IDG  K G +  A+E++  +    C   + AY+C++D LC+      A+ 
Sbjct: 383 CPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYC 442

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L +++      PN VT+N  I G C  G++D A  +F  M   G  PN  T+N L+   +
Sbjct: 443 LIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLL 502

Query: 242 RNNETSKVVELLHRMDER 259
           ++    +   L+  M+ R
Sbjct: 503 KDRRFGEAFGLVKDMEHR 520



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 131/255 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA    D MI+ GV PN   Y+ L+ G C    +  A  +F  M+INGC  NV TY+ LI
Sbjct: 334 EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GY K  D++ +  +++ M++ G  P VV Y  +   L        A  L + MQ  +  
Sbjct: 394 DGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCP 453

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T T+NTFI GLC +G +  A ++F  +    C      Y+ L+D L K  +   A+ L
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G+  N+VTYN +I+G+C  G + +A +L   M  +G  P+ +T N ++    +
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573

Query: 243 NNETSKVVELLHRMD 257
             + +  ++L+ R+ 
Sbjct: 574 QGKVNIAIQLMDRLS 588



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 128/286 (44%), Gaps = 30/286 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD---------INGC 51
           +D A +LL  M  +G  P+   Y+TLI   C  G++  AREL +S           ING 
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGV 256

Query: 52  MH---------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
                                  NV++Y T+IN      +VE SL + ++M ++G  P +
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            T+ +L  G F       AL  +D M    V      YN  + GLC    + +A  +F  
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           + +  C   +  YS LIDG  K G L+ A E++  +   G  PNVV Y  M+   C +  
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            ++A+ L  +M+ +   PN VTFNT + G   +      +++  +M
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 120/253 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D AS + + MI  G  PN   Y+ ++D  C     ++A  L  +M +  C  N VT+NT
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G C +  V+ ++ ++ +M + G  P   TYN L   L +  +   A  L  +M+H  
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYNT I G C  G + EA EL   + V   +      + +ID  CK GK+  A 
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAI 581

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   L      P+++ Y  +I G C    +++A      M ++G++PN  T+N L+   
Sbjct: 582 QLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641

Query: 241 IRNNETSKVVELL 253
             N   S  V+ L
Sbjct: 642 FSNMGHSGAVQFL 654



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M   G  PN   YS LIDG+   G++D A E++  M  +GC  NVV Y  
Sbjct: 367 LGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTC 426

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  C+     ++  L   M  +   P  VT+NT   GL    +V+ A+K+FD+M +S 
Sbjct: 427 MVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T+TYN  +D L K+    EA  L + +     EL +  Y+ +I G C  G L  A 
Sbjct: 487 CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEAL 546

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G  P+ +T NI+I  +C  G+++ A  L   + A    P+ + + +L+ G 
Sbjct: 547 ELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGI 606

Query: 241 IRNNETSKVVELLHRM 256
             +    + +  L RM
Sbjct: 607 CTHIGVEEAIVYLRRM 622



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 5/246 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M + G+ PN F Y+ L+   C    +D A +L V M   GC  + V+Y TLI+  CK   
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+E+       L+    P+V  YN L +G+ + +  E A +L DEM +  +     +Y T
Sbjct: 232 VKEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I+ L   G +  +  +   +    C   +  ++ LI G    G    A + +  + R G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++PNVV YN ++HG C+   +  A  +F  ME  G  PN  T++ L+ G  +  +     
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 251 ELLHRM 256
           E+ + M
Sbjct: 407 EVWNWM 412



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L  M  RG  PN   +++LI GF L G    A + +  M   G + NVV YN L++G C
Sbjct: 303 VLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLC 362

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             + + ++++++++M   G  P V TY+ L  G  +   ++ A ++++ M          
Sbjct: 363 SKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y   +D LC+N    +A  L   ++V  C      ++  I GLC  G+++ A ++F  +
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  PN  TYN ++     D +  +A  L  DME +G+  N VT+NT++ G       
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542

Query: 247 SKVVELLHRMDER 259
            + +ELL +M  R
Sbjct: 543 GEALELLGKMVVR 555



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 5/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD    LL  M   G+  +  ++ ++I  +   G  ++A + F  M        V  YN 
Sbjct: 92  MDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNH 151

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++        +    +YS M   G+ P V TYN L   L + ++V+ A KL  EM    
Sbjct: 152 ILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG 211

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y T I  LCK G + EA EL  +         +  Y+ LI+G+CK    E A+
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEARELAMSFTP-----SVPVYNALINGVCKEYTFEEAF 266

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   G+ PNV++Y  +I+   + G ++ +  +   M A+G +PN  TF +L+ G 
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326

Query: 241 IRNNETSKVVELLHRM 256
                + + ++   RM
Sbjct: 327 FLKGGSHEALDFWDRM 342



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 5/242 (2%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V+P   +Y+ ++D             ++ +M  +G   NV TYN L+   CK   V+ + 
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EM SKG  P  V+Y TL   L ++ +V+ A +L      S        YN  I+G+
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPS-----VPVYNALINGV 256

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK     EA +L   +     +  + +Y+ +I+ L   G +E +  +   +   G  PN+
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
            T+  +I GF   G   +A D +  M  +GV PN V +N LM G          V + ++
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 256 MD 257
           M+
Sbjct: 377 ME 378



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 5/225 (2%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
            +  +     Y  +I+      E+D  + L   M + G   +   + ++I  Y +    E
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           ++L  +  M    ++PTV  YN +   L + ++ +    ++  M+   +     TYN  +
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
             LCKN  +  A +L   +    C+    +Y+ LI  LCK+GK++ A EL  S       
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS-----FT 243

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           P+V  YN +I+G C +   ++A  L  +M  KG+ PN +++ T++
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTII 288



 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 84/170 (49%)

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           SK  + T +TY  +   L    +++    L  +M+   ++     + + I    + G   
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A + F  ++  + +  ++ Y+ ++D L    + +    ++ ++ + G+ PNV TYNI++
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
              C + ++D AH L ++M +KG  P+ V++ TL+    +  +  +  EL
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 1/157 (0%)

Query: 104 HQVEHALKLFDEMQHSDVAAETS-TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
           H +  AL+ F  + +S     T  TY   I+ L     +     L + +++       + 
Sbjct: 54  HDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDL 113

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           +  +I    + G  E A + F  +    + P V  YN ++    ++ +    + ++ +M+
Sbjct: 114 FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMK 173

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             G+ PN  T+N L+    +NN      +LL  M  +
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSK 210


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 40/292 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++L+ M++  + PN F Y+ L++G C + +   ARE+F  M  NGC  N +TY TLI
Sbjct: 106 DAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLI 165

Query: 63  N-----------------------------------GYCKTKDVEESLNLYSEMLSKGIR 87
                                               G CK   ++++L    EM   G+R
Sbjct: 166 QHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVR 225

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA-ETSTYNTFIDGLCKNGYIVEAAE 146
           P  VTY+ L HG  +  +++  ++ F+E +     + E + Y  ++D LCK GY+  A +
Sbjct: 226 PNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARK 285

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
               LR       +  YS LI+   + G+ + + EL + + R G+ P+VVTY+ +I+  C
Sbjct: 286 SVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLC 345

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            + +   A  L   MEA G  PN VT+N++M G  ++ +  +V    HR+ E
Sbjct: 346 KERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEV----HRVYE 393



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 40/299 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGF------------------------------ 30
           +D+A + ++ M Q GVRPN   YS L+ GF                              
Sbjct: 209 LDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYP 268

Query: 31  ------CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
                 C  G +DRAR+    +  +G + +VVTY+ LIN + +    + SL L  +M   
Sbjct: 269 GYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRN 328

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G++P VVTY+TL + L +  + + A +L + M+ +       TYN+ +DGLCK+G + E 
Sbjct: 329 GVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEV 388

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             ++  +   +C   +  YS +++GL K G L++A +LF+ +      P+   Y+++I  
Sbjct: 389 HRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITS 448

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPN-CVTFNTLMLG---CIRNNETSKVVELLHRMDER 259
            C  G++++A  ++  ME      N C     L+       R +   ++VE+      R
Sbjct: 449 LCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERGHR 507



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC-MHNVVTYNTL 61
           E  RL  L+  RGV      Y  ++DG C  G  ++A EL    +++G     V  YN +
Sbjct: 37  EVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV--RELSGVYTPTVFIYNGI 94

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C+   V ++  +  +M+ + I P V TY  L +GL   ++ + A ++F EM+ +  
Sbjct: 95  ITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGC 154

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY T I  L + G I EA  +    R L+    +   + ++ GLCK  +L+ A +
Sbjct: 155 KPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALK 214

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGF------------------------------------ 205
             + + ++G+ PN VTY+ ++HGF                                    
Sbjct: 215 FMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDAL 274

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C  G +D+A     ++   GV P+ VT++ L+    R  +    +ELL  M
Sbjct: 275 CKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM 325



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 2/258 (0%)

Query: 4   ASRLLDL-MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           A++LL+  +++ G + ++  ++ L        +      LF  +   G ++   TY  ++
Sbjct: 2   AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C      ++L L  E LS    PTV  YN +  GL    +V  A K+ ++M    + 
Sbjct: 62  DGLCGAGMANQALELVRE-LSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   ++GLC++     A E+F+ ++   C+     Y  LI  L + G+++ A  +
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
                 + L  +V+T   ++ G C   ++D A     +M   GV PN VT++ L+ G  +
Sbjct: 181 MIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQ 240

Query: 243 NNETSKVVELLHRMDERN 260
           + E  +V+        R 
Sbjct: 241 HGELDRVIRFFEEEKARK 258


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L+D M+ RG++P+ F Y+T+I G C  G +DRA E+  ++++ GC  +V++YN 
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+         EE   L ++M S+   P VVTY+ L   L    ++E A+ L   M+   
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y+  I   C+ G +  A E   T+    C   I  Y+ ++  LCK GK + A 
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  L  VG  PN  +YN M     + G   +A  + L+M + G+ P+ +T+N+++   
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483

Query: 241 IRNNETSKVVELLHRM 256
            R     +  ELL  M
Sbjct: 484 CREGMVDEAFELLVDM 499



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 134/256 (52%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A R+++++ + G +P+ F Y+ LI+GFC    ID A  +   M       + VTYN 
Sbjct: 140 IPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   C    ++ +L + +++LS   +PTV+TY  L         V+ ALKL DEM    
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT I G+CK G +  A E+ R L +  CE  + +Y+ L+  L   GK E   
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +      PNVVTY+I+I   C DG++++A +L   M+ KG+ P+  +++ L+   
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 241 IRNNETSKVVELLHRM 256
            R       +E L  M
Sbjct: 379 CREGRLDVAIEFLETM 394



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 134/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+R+LD M  +   P+   Y+ +I   C  G++D A ++   +  + C   V+TY  
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI        V+E+L L  EMLS+G++P + TYNT+  G+ +   V+ A ++   ++   
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YN  +  L   G   E  +L   +   KC+  +  YS LI  LC+ GK+E A 
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   GL P+  +Y+ +I  FC +G++D A +    M + G  P+ V +NT++   
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413

Query: 241 IRNNETSKVVELLHRMDE 258
            +N +  + +E+  ++ E
Sbjct: 414 CKNGKADQALEIFGKLGE 431



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 117/221 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL LM ++G+ P+A+ Y  LI  FC  G +D A E   +M  +GC+ ++V YNT
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++   CK    +++L ++ ++   G  P   +YNT+F  L+       AL +  EM  + 
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN+ I  LC+ G + EA EL   +R  +    +  Y+ ++ G CK  ++E A 
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            + +S+   G  PN  TY ++I G    G   +A +L  D+
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 131/257 (50%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E+  LL+ M+++G  P+  + + LI GF     I +A  +   ++  G   +V  YN LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG+CK   ++++  +   M SK   P  VTYN +   L    +++ ALK+ +++   +  
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I+     G + EA +L   +     +  +  Y+ +I G+CK G ++ A+E+
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            ++L   G  P+V++YNI++    N G+ ++   L   M ++   PN VT++ L+    R
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345

Query: 243 NNETSKVVELLHRMDER 259
           + +  + + LL  M E+
Sbjct: 346 DGKIEEAMNLLKLMKEK 362



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 7/195 (3%)

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK---LFDEMQHSDVA 122
           C++ +  ESL+L   M+ KG  P V+    L  G F +  +  A++   + ++    DV 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A    YN  I+G CK   I +A  +   +R          Y+ +I  LC  GKL+ A ++
Sbjct: 160 A----YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L      P V+TY I+I     +G +D+A  L  +M ++G+ P+  T+NT++ G  +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 243 NNETSKVVELLHRMD 257
                +  E++  ++
Sbjct: 276 EGMVDRAFEMVRNLE 290



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 2/117 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+ P+   Y+++I   C  G +D A EL V M       +VVTYN ++ G+CK   
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGL-FEIHQVEHALKLFDEMQHSDVAAETS 126
           +E+++N+   M+  G RP   TY  L  G+ F  ++ E A++L +++   D  +E S
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELANDLVRIDAISEYS 579


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 40/292 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A ++L+ M++  + PN F Y+ L++G C + +   ARE+F  M  NGC  N +TY TLI
Sbjct: 106 DAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLI 165

Query: 63  N-----------------------------------GYCKTKDVEESLNLYSEMLSKGIR 87
                                               G CK   ++++L    EM   G+R
Sbjct: 166 QHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVR 225

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA-ETSTYNTFIDGLCKNGYIVEAAE 146
           P  VTY+ L HG  +  +++  ++ F+E +     + E + Y  ++D LCK GY+  A +
Sbjct: 226 PNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARK 285

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
               LR       +  YS LI+   + G+ + + EL + + R G+ P+VVTY+ +I+  C
Sbjct: 286 SVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLC 345

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            + +   A  L   MEA G  PN VT+N++M G  ++ +  +V    HR+ E
Sbjct: 346 KERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEV----HRVYE 393



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 44/300 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGF------------------------------ 30
           +D+A + ++ M Q GVRPN   YS L+ GF                              
Sbjct: 209 LDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYP 268

Query: 31  ------CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
                 C  G +DRAR+    +  +G + +VVTY+ LIN + +    + SL L  +M   
Sbjct: 269 GYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRN 328

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G++P VVTY+TL + L +  + + A +L + M+ +       TYN+ +DGLCK+G + E 
Sbjct: 329 GVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEV 388

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             ++  +   +C   +  YS +++GL K G L++A +LF+ +      P+   Y+++I  
Sbjct: 389 HRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITS 448

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPN-CVTFNTLMLG---CIRNNETSKVVELL----HRM 256
            C  G++++A  ++  ME      N C     L+       R +   ++VE+     HRM
Sbjct: 449 LCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERGHRM 508



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC-MHNVVTYNTL 61
           E  RL  L+  RGV      Y  ++DG C  G  ++A EL    +++G     +  YN +
Sbjct: 37  EVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV--RELSGVYTPTLFIYNGI 94

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C+   V ++  +  +M+ + I P V TY  L +GL   ++ + A ++F EM+ +  
Sbjct: 95  ITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGC 154

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY T I  L + G I EA  +    R L+    +   + ++ GLCK  +L+ A +
Sbjct: 155 KPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALK 214

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGF------------------------------------ 205
             + + ++G+ PN VTY+ ++HGF                                    
Sbjct: 215 FMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDAL 274

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C  G +D+A     ++   GV P+ VT++ L+    R  +    +ELL  M
Sbjct: 275 CKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM 325



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 2/258 (0%)

Query: 4   ASRLLDL-MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           A++LL+  +++ GV+ ++  ++ L        +      LF  +   G ++   TY  ++
Sbjct: 2   AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C      ++L L  E LS    PT+  YN +  GL    +V  A K+ ++M    + 
Sbjct: 62  DGLCGAGMANQALELVRE-LSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   ++GLC++     A E+F+ ++   C+     Y  LI  L + G+++ A  +
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
                 + L  +V+T   ++ G C   ++D A     +M   GV PN VT++ L+ G  +
Sbjct: 181 MIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQ 240

Query: 243 NNETSKVVELLHRMDERN 260
           + E  +V+        R 
Sbjct: 241 HGELDRVIRFFEEEKARK 258


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 132/240 (55%), Gaps = 1/240 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G++PN   Y+TL+ GFC  G ID+A  +F+ M+  GC  N+ TY +LING+ K   +E +
Sbjct: 346 GLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGA 405

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + ++++ML+ G  P VV Y ++   L    + + A  L + M   + A    T+N FI G
Sbjct: 406 VYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 465

Query: 135 LCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           LC  G +  A ++FR + +  +C   I  Y+ L+DGL K  ++E A+ L + +   G+  
Sbjct: 466 LCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 525

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +  TYN ++HG CN G    A  L   M   G +P+ +T N ++L   +  +  + V++L
Sbjct: 526 STSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQML 585



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 6/261 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LL  M  +G  PNA  Y+T+I   C  G +   R+L    +       V  YN 
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNA 250

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +D +  + L SEM+ KGI P V++Y+TL + L    Q+E A  L  +M    
Sbjct: 251 LINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRG 310

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                 T ++ + G    G   +A +++ + +R    +  + AY+ L+ G C  G ++ A
Sbjct: 311 CHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKA 370

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +F  +  +G  PN+ TY  +I+GF   G ++ A  ++  M   G  PN V + +++  
Sbjct: 371 VSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEA 430

Query: 240 CIRNNETSKVVELLHRMDERN 260
             R+++  +   L+  M + N
Sbjct: 431 LCRHSKFKEAESLIEIMSKEN 451



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 5/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M + G  PN   Y +LI+GF   G ++ A  ++  M  +GC  NVV Y +
Sbjct: 367 IDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTS 426

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHS 119
           ++   C+    +E+ +L   M  +   P+V T+N    GL +  +++ A K+F +M Q  
Sbjct: 427 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQY 486

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
                  TYN  +DGL K   I EA  L R + +   E     Y+ L+ G C  G    A
Sbjct: 487 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIA 546

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG---VAPNCVTFNTL 236
            +L   +   G  P+ +T N++I  +C  G+ ++A  + LD+ + G     P+ +++  +
Sbjct: 547 LQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM-LDLVSCGRRKWRPDVISYTNV 605

Query: 237 MLGCIRNNETSKVVELLHRM 256
           + G  R+N     V L  RM
Sbjct: 606 IWGLCRSNCREDGVILFERM 625



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 5/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    LL  M  +G   +  ++ ++I  +   G  +RA E+F  +   GC  +V  YN 
Sbjct: 91  VDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNH 150

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++       ++    +Y +M   G  P V TYN L   L + ++V+ A KL  EM +  
Sbjct: 151 VLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG 210

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y T I  +C+ G + E  +L         E  +  Y+ LI+GLCK    +   
Sbjct: 211 CCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCKERDYKGGV 265

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G+ PNV++Y+ +I+   N GQ++ A  L   M  +G  PN  T ++L+ GC
Sbjct: 266 ELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGC 325

Query: 241 IRNNETSKVVELLHRM 256
                T   +++ ++M
Sbjct: 326 FVRGTTFDALDMWNQM 341



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 3/231 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  + + M+  G  PN  VY+++++  C   +   A  L   M    C  +V T+N 
Sbjct: 402 LEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 461

Query: 61  LINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            I G C    ++ +  ++ +M  +    P +VTYN L  GL + +++E A  L  E+   
Sbjct: 462 FIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 521

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V   TSTYNT + G C  G    A +L   + V          + +I   CK GK E A
Sbjct: 522 GVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERA 581

Query: 180 WELFQ--SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
            ++    S  R    P+V++Y  +I G C     +    LF  M ++ + P
Sbjct: 582 VQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 73/149 (48%)

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T +T+  +   L    QV+    L  +M+          + + I    + G    A E+F
Sbjct: 74  TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 133

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             ++   C+  ++ Y+ ++D L    +++  + +++ + R G  PNV TYN+++   C +
Sbjct: 134 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 193

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            ++D A  L ++M  KG  PN V++ T++
Sbjct: 194 NKVDGAKKLLVEMSNKGCCPNAVSYTTVI 222



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 5/207 (2%)

Query: 53  HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           H  +T+  +I        V+    L  +M  +G   +   + ++     ++   E A+++
Sbjct: 73  HTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEM 132

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           F  ++          YN  +D L     I     ++R ++    E  +  Y+ L+  LCK
Sbjct: 133 FYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 192

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
             K++ A +L   +   G  PN V+Y  +I   C  G + +   L     A+   P    
Sbjct: 193 NNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL-----AERFEPVVSV 247

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           +N L+ G  +  +    VEL+  M E+
Sbjct: 248 YNALINGLCKERDYKGGVELMSEMVEK 274



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 1/155 (0%)

Query: 106 VEHALKLFDEMQHSDVAAETS-TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           V  AL  F  + +S++   T  T+   I  L  +G +     L + +++       + + 
Sbjct: 55  VPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI 114

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +I    ++G  E A E+F  +   G  P+V  YN ++     + ++   + ++ DM+  
Sbjct: 115 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 174

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G  PN  T+N L+    +NN+     +LL  M  +
Sbjct: 175 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 209


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 129/243 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+ PN  +++TLIDG C    I  A+ +F+ M        V  YN+LI+G  ++  
Sbjct: 269 LLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGY 328

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +E+L  + E++ KG+RP   T + +  GL +  Q++ A +  + MQ S +A   + YN 
Sbjct: 329 AQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNV 388

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK+G + EA      +  +  E  +  YS LIDG  K G++E A  ++  +   G
Sbjct: 389 LIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKG 448

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PNVVTY  +IHG   +G MD A  L  +ME KG+  N +T + L+ G  R N     V
Sbjct: 449 VEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAV 508

Query: 251 ELL 253
             +
Sbjct: 509 RFI 511



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 126/257 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L   M + G+RPN + Y+ L+        I  A   +  +   G + N V + TLI
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLI 285

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+   + E+ N++ +M    + PTV  YN+L HG F     + AL  F E+    + 
Sbjct: 286 DGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLR 345

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  T +  + GLC  G +  A      ++     L   AY+ LID  CK G L+ A   
Sbjct: 346 PDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVT 405

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +  VG+ PNVVTY+ +I G   +G+M+ A  ++ +M AKGV PN VT+  L+ G  +
Sbjct: 406 CTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAK 465

Query: 243 NNETSKVVELLHRMDER 259
           N +      L   M+E+
Sbjct: 466 NGDMDAAFWLQKEMEEK 482



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 116/231 (50%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L D M+ RG+ P+   Y+TLI+     G++ +A E++  M       NVVTY T+I   C
Sbjct: 160 LFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALC 219

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   + ++  L+ EM   G+RP + TYN L    F+   ++HAL  + ++    +     
Sbjct: 220 EEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDV 279

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            + T IDGLC+   I EA  +F  +   +    +  Y+ LI G  + G  + A   FQ +
Sbjct: 280 IFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            R GL P+  T +I++ G C+ GQM  A      M+  G+A N   +N L+
Sbjct: 340 IRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLI 390



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 6/235 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A+R L++M Q G+  NA  Y+ LID +C +G +D A      M   G   NVVTY++
Sbjct: 364 MQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSS 423

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K  ++E ++ +Y+EM++KG+ P VVTY  L HG  +   ++ A  L  EM+   
Sbjct: 424 LIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKG 483

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE------LGIEAYSCLIDGLCKIG 174
           + +   T +  +DGLC+   + +A          K             Y  LI GL   G
Sbjct: 484 IYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDG 543

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           +   A   F  +   G++P+  TY ++I G C  G +  A  L+ DM   GV P 
Sbjct: 544 QYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 95/198 (47%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N +++G  K   +     L+ EML +G+ P+VVTYNTL +       V  A +++D+M  
Sbjct: 142 NAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +     TY T I  LC+   I +A  LF  ++       +  Y+ L+    K   ++ 
Sbjct: 202 RRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH 261

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A   +  L + GL+PN V +  +I G C   ++ +A ++FLDM    VAP    +N+L+ 
Sbjct: 262 ALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIH 321

Query: 239 GCIRNNETSKVVELLHRM 256
           G  R+    + +     +
Sbjct: 322 GAFRSGYAQEALAFFQEI 339



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 3/99 (3%)

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
            A   L+  L ++   + A  +F    R+  +P +   N ++ G      + +  +LF +
Sbjct: 107 PALGVLVIALSQMALPDEALSVFG---RLRELPALPACNAILDGLVKAHMLARVWELFDE 163

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           M  +G+ P+ VT+NTL+  C    + +K  E+  +M  R
Sbjct: 164 MLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVAR 202


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  150 bits (378), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 132/252 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L  +M +  + P+   Y+T+I+G C    +  A+ELF  M    C  N VT++ LI
Sbjct: 147 KAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALI 206

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+CK  DVEE   L  EM   G+   V  Y+ L  G      +E   +LF+EM   +V 
Sbjct: 207 DGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVT 266

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+  ++ LCK     EAA++  T+   K    + AY+ L DGL K G+   A ++
Sbjct: 267 PNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKV 326

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + + G  PN VTYN +I+G C +G++D A  +   M  KG  P+ VT++TL+ G   
Sbjct: 327 LDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCG 386

Query: 243 NNETSKVVELLH 254
             +  + V+LL+
Sbjct: 387 VGKIDEAVDLLN 398



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 131/254 (51%), Gaps = 2/254 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   LL+ M + G+  + FVYS LI GFC  G+I+R +ELF  M       NVVTY+ 
Sbjct: 215 VEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSC 274

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N  CK +  +E+  +   M    +RP VV Y  L  GL +  +   A+K+ D M    
Sbjct: 275 LMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRG 334

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  I+GLCK G + +A  +  T+     +  +  YS L+ GLC +GK++ A 
Sbjct: 335 EEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAV 394

Query: 181 ELFQSL--PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           +L   L      + P+V  +N++I   C   ++  A  ++  M  +G   N VT+N L+ 
Sbjct: 395 DLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILID 454

Query: 239 GCIRNNETSKVVEL 252
           G +   + +K +EL
Sbjct: 455 GYLSAGKLTKALEL 468



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 147/262 (56%), Gaps = 2/262 (0%)

Query: 1   MDEASRLLDLMIQR--GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           +DEA  LL+L++ +   ++P+ F ++ +I   C    +  A+ ++ +M   G   N+VTY
Sbjct: 390 IDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTY 449

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N LI+GY     + ++L L+ + +  GI P   TY  L +GL ++  +  A  LF++ + 
Sbjct: 450 NILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRA 509

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           S      S YNT +  LC+   + +A  LF+ +R    +  + +++ +IDG  K G +E+
Sbjct: 510 SGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVES 569

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A EL   +  + L+P+ +T++I+I+ F   GQ+D+A  L+  M + G  P+ V F++L+ 
Sbjct: 570 AKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLK 629

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G     +T KVV +L +M +++
Sbjct: 630 GYSLKGKTEKVVSMLQQMADKD 651



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+    +TLID        D    +   M          + + LI  +  T+    +  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
              ++ +G    V  +N L  G  +      A+ LF  M+ + +  +  +YNT I+GLCK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
              +VEA ELF+ ++  +C+     +S LIDG CK G +E  + L + + ++GL  +V  
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           Y+ +I GFC+ G +++  +LF +M  K V PN VT++ LM    +  +  +  ++L  M
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 8/206 (3%)

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           NTLI+   K K  +  ++++S+M S  + P   + + L        +   A  +   +  
Sbjct: 63  NTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMK 122

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELF----RTLRVLKCELGIEAYSCLIDGLCKIG 174
                    +N  + G C++G   +A +LF    R   +  C     +Y+ +I+GLCK  
Sbjct: 123 RGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCV----SYNTVINGLCKGK 178

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +L  A ELF+ +      PN VT++ +I GFC +G +++   L  +ME  G+  +   ++
Sbjct: 179 RLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYS 238

Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
            L+ G     +  +  EL + M  +N
Sbjct: 239 ALISGFCSKGDIERGKELFNEMLRKN 264



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G RP    Y+TL+   C    +++AR LF  M       +VV++N +I+G  K  DVE +
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L  EML+  + P  +T++ L +   ++ Q++ A  L++ M       +   +++ + G
Sbjct: 571 KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG 630

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
               G   +   + + +      L  +  S ++  LC + K
Sbjct: 631 YSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSK 671



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 68/136 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M      P+   ++ +IDG    G+++ A+EL + M     + + +T++ 
Sbjct: 532 VEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSI 591

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN + K   ++E+ +LY  M+S G  P  V +++L  G     + E  + +  +M   D
Sbjct: 592 LINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKD 651

Query: 121 VAAETSTYNTFIDGLC 136
           V  ++   +T +  LC
Sbjct: 652 VVLDSKLTSTILACLC 667


>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           cujabensis]
          Length = 409

 Score =  150 bits (378), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 123/221 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M+  G  P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 189 LDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTT 248

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 249 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKG 308

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A    + +      L   AY+ LI GLC+ G+   A 
Sbjct: 309 LKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 368

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           ++ + +  VGL P+  TY ++I+ FC  G + K   L  +M
Sbjct: 369 KMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 134/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   Y+TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 157 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLIN 216

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++ +  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    +  
Sbjct: 217 GLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLP 276

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   +     +     Y+ LIDG CK G L+TA+   
Sbjct: 277 DLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHR 336

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P+  T+  ++    + 
Sbjct: 337 KRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKK 396

Query: 244 NETSKVVELLHRM 256
            +  K  +LL  M
Sbjct: 397 GDVWKGSKLLKEM 409



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 112/203 (55%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV+YNTL +G   +  ++   +L   M 
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S    +  TY+  I+GLCK   +  A ELF  + V         ++ LIDG CK G+++
Sbjct: 201 ASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 260

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L+P+++TYN +I+G C  G + +AHDL  +M  KG+ P+  T+ TL+
Sbjct: 261 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLI 320

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +         RM + N
Sbjct: 321 DGCCKEGDLDTAFXHRKRMIQEN 343



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 129/246 (52%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 188

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S ML+ G  P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 189 LDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTT 248

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 249 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKG 308

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+  TY  +I G C +G +D A      M  + +  + V +  L+ G  +   +    
Sbjct: 309 LKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 368

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 369 KMLREM 374



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 115/244 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 65  RSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWG 124

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 125 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 184

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +        +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 185 RLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXV 244

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 245 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 304

Query: 257 DERN 260
             + 
Sbjct: 305 SXKG 308


>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score =  150 bits (378), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 144/259 (55%), Gaps = 7/259 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTY 58
           ++ A ++ D+M    V+PN   Y+T+I+GFC  G+++ AR +F  M ++G  C+ N VTY
Sbjct: 210 IENAKKVFDVMT---VKPNLLAYNTMINGFCKKGDMESARLVFDRM-MSGEDCLPNHVTY 265

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
            TLI+GYCK  ++EE+    +EM+++G RP  +TYN + +GL    +V+ A  L  +M+ 
Sbjct: 266 TTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRL 325

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           +      ST+ + + GLC  G   +A    R +        +++Y  +I+G CKIGK + 
Sbjct: 326 NGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDE 385

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  L + +   GL P V ++N +      +G++D+A  L   M      PN V++NT++ 
Sbjct: 386 AISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIIC 445

Query: 239 G-CIRNNETSKVVELLHRM 256
           G C+       V +L+ RM
Sbjct: 446 GLCMAKGRMQDVEDLVDRM 464



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 133/244 (54%), Gaps = 4/244 (1%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V P+   Y+T+I G+C  G I+ A+++F   D+     N++ YNT+ING+CK  D+E + 
Sbjct: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGDMESAR 246

Query: 76  NLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
            ++  M+S +   P  VTY TL  G  +  ++E A K  +EM +        TYN  I G
Sbjct: 247 LVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYG 306

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC NG + EA  L   +R+   +  +  +  ++ GLC +GK + A    +++    + P+
Sbjct: 307 LCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPD 366

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V +Y ++I+GFC  G+ D+A  L  +M A+G+ P   +FN +    + N E  + + LL 
Sbjct: 367 VKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLK 426

Query: 255 RMDE 258
           +M +
Sbjct: 427 QMPQ 430



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 36/254 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT--- 57
           ++EA + ++ M+ RG RPN   Y+ +I G C+ G +D A+ L   M +NG   NV T   
Sbjct: 278 LEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 337

Query: 58  --------------------------------YNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                           Y  +ING+CK    +E+++L  EM ++G
Sbjct: 338 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 397

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC-KNGYIVEA 144
           ++PTV ++N +F  L E  +++ A+ L  +M   D      +YNT I GLC   G + + 
Sbjct: 398 LKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDV 457

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            +L   +      L    YSCL+ G C+ G +E   ++   +     +  + ++++++  
Sbjct: 458 EDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQ 517

Query: 205 FCNDGQMDKAHDLF 218
            C  G++ +A  LF
Sbjct: 518 LCAKGKVTEAEKLF 531



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 11/224 (4%)

Query: 21  FVYSTLIDGFCLTGEIDRARELF---VSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           F  S LI  +   G +  A   F     ++   C++   +YN+L+    +   ++ +   
Sbjct: 124 FFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLY---SYNSLLGVLVRVNSIKLAEEF 180

Query: 78  YSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           + +++ + +  P V TY T+  G  ++  +E+A K+FD M    V      YNT I+G C
Sbjct: 181 FHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFC 237

Query: 137 KNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           K G +  A  +F R +    C      Y+ LIDG CK G+LE A +    +   G  PN 
Sbjct: 238 KKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNE 297

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +TYN MI+G C +G++D+A  L   M   G   N  T  +++ G
Sbjct: 298 LTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKG 341


>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 376

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 138/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  + +LM + G   ++  Y  +IDGFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   +++++++ + M+  G +P    YNTL +G     + + A+++F EM   D
Sbjct: 135 MINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMD 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY+T I+GLCK     EA +L + +     +  +  YS L+ GLC+  K+E A 
Sbjct: 195 CSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+   A  L+ DM     APN VT NTLM G 
Sbjct: 255 QLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 127/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L+ MI+ G +PNA VY+TLI+GF    + D A  +F  M    C   +VTY+T
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ +L  EML KG +P V+TY+ L  GL + H+VE AL+L++++    
Sbjct: 205 LINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G    A  L+  +    C   +  ++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K + P  +T
Sbjct: 325 VIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTIIT 376



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 131/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++  +L++   +G   +AF YS +I+G C   ++D+A  +   M  +GC  N   YNT
Sbjct: 110 INKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+      ++++ ++ EM S    PT+VTY+TL +GL +  +   A  L  EM    
Sbjct: 170 LINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  + GLC+   +  A +L+  +     +  ++ ++ LI GLC +GK + A 
Sbjct: 230 WKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +      PN+VT+N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 MLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISFAILFLH 363



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 124/229 (54%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A+ +++ M  +    + V YN ++ G+ +   +++  +L+  M  KG +  V
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGSQ-NV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           V++N +  GLF+  +V+ A+ +++ M+ S    ++ TY   IDG CKNGYI ++  +   
Sbjct: 60  VSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEI 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK  KL+ A  +   + + G  PN   YN +I+GF    +
Sbjct: 120 AEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            D A  +F +M +   +P  VT++TL+ G  +    S+  +L+  M E+
Sbjct: 180 FDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEK 228


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 135/249 (54%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I+ G+ PN   ++ +I G+CL  +   A E    M    C  + VTYNT+++  CK   +
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRL 259

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
            ++ +L  +M S+G+ P   TYN L +G  ++  ++ A  + + M  +++  +  TYN  
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+GLC  G I EA +L   +  LK    + +Y+ LI+G  +  K+  A++L + +   G+
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PN VT+NIM+  +C +G+MD A +    ME  G +P+CVT+NTL+ G  +     +   
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439

Query: 252 LLHRMDERN 260
            +  M  +N
Sbjct: 440 TMDEMGRKN 448



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 130/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL+ M ++GV+PNA  ++ ++  +C  G++D A      M+ +G   + VTYNT
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK  ++ E+     EM  K ++   VT NT+   L    ++E A KL    +   
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y T I G  K+G +  A +L+  ++  +       Y+C+I GLC+ GK E A 
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                L   GL+P+  TYN ++HG+C +G ++KA      M      P+  T N L+ G 
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603

Query: 241 IRNNETSKVVELLH 254
                  K ++L +
Sbjct: 604 CMEGMLEKALKLFN 617



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 144/261 (55%), Gaps = 6/261 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ +++LM Q  + P+ + Y+ LI+G C  G I+ A +L   M+    + +VV+YNT
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  +   + E+  L  EM  KG++P  VT+N +     +  +++ A     +M+ S 
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL---KCELGIEAYSCLIDGLCKIGKLE 177
            + +  TYNT I+G CK G + EA   FRT+  +     ++     + ++  LC+  KLE
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A++L  S  + G   + V+Y  +I G+  DG +D+A  L+ +M+ K + P+ VT+N ++
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G  +  +T + +  L+ + E
Sbjct: 531 GGLCQCGKTEQAISKLNELLE 551



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 139/261 (53%), Gaps = 4/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA R +D M ++ ++ ++   +T++   C   +++ A +L  S    G   + V+Y T
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY K  +V+ +L L+ EM  K I P+ VTYN +  GL +  + E A+   +E+  S 
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
           +  + +TYNT + G C+ G + +A +     ++++     + ++C  L+ GLC  G LE 
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHN--KMVENSFKPDVFTCNILLRGLCMEGMLEK 611

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +LF +    G   + VTYN +I   C +G++D A +L  +ME K + P+  T+N ++ 
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIIT 671

Query: 239 GCIRNNETSKVVELLHRMDER 259
               +    +  E + +M E+
Sbjct: 672 ALTDSGRIREAEEFMSKMLEK 692



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 126/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  M  RG+ PN   Y+ L+ G+C  G +  A  +   M  N  + +V TYN 
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    +EE+  L  EM +  + P VV+YNTL +G  E  ++  A KL +EM    
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T+N  +   CK G + +A+     +           Y+ LI+G CK G +  A+
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                + R  +  + VT N ++   C + ++++A+ L      +G   + V++ TL++G 
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 241 IRNNETSKVVELLHRMDER 259
            ++    + ++L   M E+
Sbjct: 499 FKDGNVDRALKLWDEMKEK 517



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 115/231 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +LL    +RG   +   Y TLI G+   G +DRA +L+  M     + + VTYN 
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G C+    E++++  +E+L  G+ P   TYNT+ HG      VE A +  ++M  + 
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T N  + GLC  G + +A +LF T       +    Y+ LI  LCK G+L+ A+
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
            L   +    L P+  TYN +I    + G++ +A +    M  KG  P  V
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 27/271 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L D M ++ + P+   Y+ +I G C  G+ ++A      +  +G + +  TYNT
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYC+  DVE++   +++M+    +P V T N L  GL     +E ALKLF+      
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLET 178
            A +T TYNT I  LCK G + +A  L   +   + ELG +   Y+ +I  L   G++  
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEME--EKELGPDHYTYNAIITALTDSGRIRE 681

Query: 179 AWELFQSLPRVGLMP-----------------------NVVTYNIMIHGFCNDGQMDKAH 215
           A E    +   G +P                       + V Y+  I   C +G+   A 
Sbjct: 682 AEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAM 741

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            +F + + KG+  +  T+  LM G I+  ++
Sbjct: 742 RIFGESKQKGITVDKSTYINLMDGLIKRRKS 772



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDG---FCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           A ++   M +  +RPN    +TL++    +  +  +  +RE F      G + NV T+N 
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 61  LINGYC---KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +I GYC   K KD  E LN+   M      P  VTYNT+   L +  ++  A  L  +M+
Sbjct: 214 VIYGYCLENKFKDAVEFLNV---MGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMK 270

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +    +TYN  + G CK G++ EAA +   +        +  Y+ LI+GLC  G++E
Sbjct: 271 SRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIE 330

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A++L   +  + L+P+VV+YN +I+G     ++ +A  L  +M  KGV PN VT N ++
Sbjct: 331 EAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMV 390

Query: 238 LGCIRNNETSKVVELLHRMDE 258
               +  +       + +M+E
Sbjct: 391 KWYCKEGKMDDASNTITKMEE 411



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 132/273 (48%), Gaps = 42/273 (15%)

Query: 25  TLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
           +L+ GF  T   DR  +L +S+ +     +    +T I  Y ++     +  ++ +M   
Sbjct: 109 SLLLGFIAT---DRRHDLHLSI-LRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRL 164

Query: 85  GIRPTVVTYNTLFHGL------------------------------FEI--------HQV 106
            +RP ++T NTL + L                              F I        ++ 
Sbjct: 165 RLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKF 224

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           + A++  + M   + + +  TYNT +D LCK G + +A +L   ++          Y+ L
Sbjct: 225 KDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNIL 284

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           + G CK+G L+ A  + + + +  L+P+V TYN++I+G CN+G++++A  L  +ME   +
Sbjct: 285 VYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKL 344

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            P+ V++NTL+ GC+  ++ S+  +LL  M E+
Sbjct: 345 LPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK 377



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG---FCNDGQMDKAHDLFLDMEA 223
           I    + G+   A+++F+ + R+ L PN++T N +++    + +   +  + + F D   
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIK 201

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G+ PN  TFN ++ G    N+    VE L+ M + N
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN 238


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 134/237 (56%)

Query: 2    DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            ++A  L + M   G  PN F Y+ L+D    +  I++  +L+  M   GC  N +T+N +
Sbjct: 813  EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872

Query: 62   INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            I+   K+ ++ ++L+LY E++S    PT  TY  L  GL +  + E A+K+F+EM     
Sbjct: 873  ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932

Query: 122  AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +  YN  I+G  K+G I  A ELF+ +        +++Y+ L++ LC  G+++ A +
Sbjct: 933  GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992

Query: 182  LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             F+ L   GL P+ V+YN +I+G     ++D+A  LF +M+ +G++P+  T+N L+L
Sbjct: 993  YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALIL 1049



 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 136/260 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +LD+M  +G+ PN   Y+T+I G      +D A EL  +M+  G      +Y  
Sbjct: 391 VDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVL 450

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+ Y K+ D  ++++ +  M  +GI P++   N   + L E  ++  A  +F+++    
Sbjct: 451 FIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCG 510

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ ++ TYN  +    K G I +A +L   +    CE  +   + LI+ L K G+++ AW
Sbjct: 511 LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAW 570

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  L  + L P VVTYNI++ G   +G++ KA +LF  M   G  PN +TFN+L+   
Sbjct: 571 KMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCL 630

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N+     +++  RM   N
Sbjct: 631 SKNDAVDLALKMFCRMTMMN 650



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 127/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M   G  P+   Y+ LID  C  G++D+A+EL+V M  +    + VTY T
Sbjct: 286 IDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYIT 345

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ + K  D+E     ++EM   G  P VVTY  L   L +   V+ A  + D M    
Sbjct: 346 LMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYNT I GL K   + EA EL   +  L  +    +Y   ID   K G    A 
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F+++ + G+MP++   N  ++     G++ +A D+F D+   G++P+ VT+N LM   
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY 525

Query: 241 IRNNETSKVVELLHRM 256
            +  +  K  +LL  M
Sbjct: 526 SKAGQIDKATQLLSEM 541



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 130/245 (53%)

Query: 15   GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
            G+ P    Y+ L+DG   +   ++A ELF  M   G   N  TYN L++ + K+K + + 
Sbjct: 791  GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 75   LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             +LYSEM S+G  P  +T+N +   L + + +  AL L+ E+   D +    TY   IDG
Sbjct: 851  YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910

Query: 135  LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            L K G   +A ++F  +    C      Y+ LI+G  K G+++ A ELF+ + + G+ P+
Sbjct: 911  LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970

Query: 195  VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            + +Y I++   C  G++D+A   F +++  G+ P+ V++N ++ G  ++    + + L  
Sbjct: 971  LKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030

Query: 255  RMDER 259
             M  R
Sbjct: 1031 EMKNR 1035



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 128/237 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M      P+   Y TL+D F   G+++  +  +  M+++G   +VVTY  
Sbjct: 321 LDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTI 380

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   CK+ DV+ + ++   M +KGI P + TYNT+  GL +  +++ AL+L + M+   
Sbjct: 381 LIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     +Y  FID   K+G   +A + F T++       I A +  +  L + G++  A 
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAE 500

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ++F  L + GL P+ VTYN+++  +   GQ+DKA  L  +M +KG  P+ +  N+L+
Sbjct: 501 DIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLI 557



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 36/288 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNV----- 55
           +DEA  LL+ M   GV+P AF Y   ID +  +G+  +A + F +M   G M ++     
Sbjct: 426 LDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNA 485

Query: 56  ------------------------------VTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
                                         VTYN L+  Y K   ++++  L SEM+SKG
Sbjct: 486 SLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKG 545

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P V+  N+L + L++  +V+ A K+F  +++  +A    TYN  + GL K G I++A 
Sbjct: 546 CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKAL 605

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           ELF ++    C      ++ L+D L K   ++ A ++F  +  +   P+V+TYN +I+G 
Sbjct: 606 ELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGL 665

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
             +G++D A   F  M+ K ++P+ VT  TL+ G +R+      ++++
Sbjct: 666 IREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVV 712



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A   L  M + G   NA+ Y+ LI    L G  + A +++  M   G   ++ TY+ L+
Sbjct: 184 RAPFALRKMTEVGFILNAYSYNGLIH-LLLPGFCNEALKVYKRMISEGMKPSMKTYSALM 242

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
               +  D  + +NL  EM S G+RP + TY      L    +++ A  +F EM      
Sbjct: 243 VALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCG 302

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY   ID LC  G + +A EL+  +R          Y  L+D   K+G LET    
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRF 362

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +   G  P+VVTY I+I   C  G +D+A D+   M  KG+ PN  T+NT++ G ++
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422

Query: 243 NNETSKVVELLHRMDE 258
                + +ELL  M+ 
Sbjct: 423 ARRLDEALELLENMES 438



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 119/219 (54%)

Query: 18   PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
            P    Y  LIDG    G  ++A ++F  M   GC  N V YN LING+ K+ +++ +  L
Sbjct: 899  PTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACEL 958

Query: 78   YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            + +M+ +GIRP + +Y  L   L    +++ A++ F+E++ + +  +T +YN  I+GL K
Sbjct: 959  FKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGK 1018

Query: 138  NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
            +  + EA  LF  ++       +  Y+ LI  L   GK++ A ++++ L  VGL P+V T
Sbjct: 1019 SRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFT 1078

Query: 198  YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
            YN +I G    G  D+A  +F  M   G +PN  TF  L
Sbjct: 1079 YNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 125/258 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA ++   MI  G++P+   YS L+      G+  +   L   M   G   N+ TY   
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I    + + ++++  ++ EM  +G  P V+TY  L   L    +++ A +L+ +M+ S  
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + +  TY T +D   K G +      +  + V      +  Y+ LI+ LCK G ++ A++
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +   G+ PN+ TYN MI G     ++D+A +L  +ME+ GV P   ++   +    
Sbjct: 397 MLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYG 456

Query: 242 RNNETSKVVELLHRMDER 259
           ++ + +K ++    M +R
Sbjct: 457 KSGDPAKAIDTFETMKKR 474



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 113/208 (54%)

Query: 2    DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            ++A ++ + M+  G  PN+ +Y+ LI+GF  +GEID A ELF  M   G   ++ +Y  L
Sbjct: 918  EQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTIL 977

Query: 62   INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
            +   C T  ++E++  + E+   G+ P  V+YN + +GL +  +++ AL LF EM++  +
Sbjct: 978  VECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGI 1037

Query: 122  AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
            + +  TYN  I  L   G +  A +++  L+++  E  +  Y+ LI G    G  + A+ 
Sbjct: 1038 SPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFS 1097

Query: 182  LFQSLPRVGLMPNVVTYNIMIHGFCNDG 209
            +F+ +  VG  PN  T+  + + +   G
Sbjct: 1098 VFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 99/174 (56%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D A  L   M++ G+RP+   Y+ L++  C+TG ID A + F  + + G   + V+YN 
Sbjct: 952  IDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +ING  K++ ++E+L+L+SEM ++GI P + TYN L   L    +V+ A+K+++E+Q   
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            +     TYN  I G   +G   +A  +F+ + V+ C    E ++ L +   + G
Sbjct: 1072 LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 38/296 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++   +    + P    Y+ L+ G    G+I +A ELF SM  +GC  N +T+N+
Sbjct: 566 VDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNS 625

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K   V+ +L ++  M      P V+TYNT+ +GL    ++++A   F +M+   
Sbjct: 626 LLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF- 684

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC-----ELGIEAYSC---------- 165
           ++ +  T  T I G+ ++G + +A ++        C     +   E   C          
Sbjct: 685 LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEA 744

Query: 166 ---------------------LIDGLCKIGKLETAWELFQSLPR-VGLMPNVVTYNIMIH 203
                                LI  LCK  K   A  +F    + +G+ P + +YN ++ 
Sbjct: 745 ISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMD 804

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G       +KA +LF DM++ G  PN  T+N L+    ++   +K+ +L   M  R
Sbjct: 805 GLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSR 860



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 36/216 (16%)

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL----------FEIHQV------------ 106
           + +E+ + ++  M  K I   + TY T+F  L          F + ++            
Sbjct: 145 RRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSY 204

Query: 107 ------------EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
                         ALK++  M    +     TY+  +  L + G   +   L   ++ +
Sbjct: 205 NGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSI 264

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                I  Y+  I  L +  +++ AW +F+ +   G  P+V+TY ++I   C  G++DKA
Sbjct: 265 GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKA 324

Query: 215 HDLFLDMEAKGVAPNCVTFNTLM--LGCIRNNETSK 248
            +L++ M A   +P+ VT+ TLM   G + + ET K
Sbjct: 325 KELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVK 360



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 1/165 (0%)

Query: 94  NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           N +   L E  ++E  + +FD MQ   +    +TY T    L   G I  A    R +  
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194

Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           +   L   +Y+ LI  L   G    A ++++ +   G+ P++ TY+ ++      G   K
Sbjct: 195 VGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRK 253

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             +L  +M++ G+ PN  T+   +    R         +   MD+
Sbjct: 254 IMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDD 298


>gi|255660980|gb|ACU25659.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 376

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 131/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   + +LM   G   ++  Y  L+ GFC  G ID++  +    +  G +     Y+ +I
Sbjct: 77  EVIXIWELMKXSGFVEDSITYGILVHGFCXNGYIDKSLHVLEMAEQKGGVLXAFAYSAMI 136

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK  +++ ++++ + M+  G +P    YNTL +GL    + E A+++F EM     +
Sbjct: 137 NGLCKEANLBRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMXTMHCS 196

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT I+GLCKN     A  L + L       G+  YS L+ GLC   K+E A +L
Sbjct: 197 PTIITYNTLINGLCKNEMFGXAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQL 256

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G  +
Sbjct: 257 WNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYK 316

Query: 243 NNETSKVVELLHRM 256
           + +    + +  R+
Sbjct: 317 DGDIRNALVIWARI 330



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 125/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +B A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LBRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMXTMHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +    + NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGXAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K +    +T
Sbjct: 325 VIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVLTKIT 376



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 132/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D++  +L++  Q+G    AF YS +I+G C    +BRA  +   M  +GC  N   YNT
Sbjct: 110 IDKSLHVLEMAEQKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVGASKFEDAIRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  + +A +L+  +     +  ++ ++ LI GLC +GK++ A 
Sbjct: 230 LNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 126/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  + + G+ P    Y+TLIDG+C  G++  AR L   M   GC  +V TY  
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K +++  +   + EMLSKG++P    YNT       +     A +L + M    
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG 513

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T TYN  IDGLCK G + +A  L   +     +     Y+CLI   C+ G L  A 
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +   GL P+VVTY I++H  C  G +  A+  F  M   G+ PN +T+N L+   
Sbjct: 574 KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 633

Query: 241 IRNNETSKVVELLHRMDER 259
                T       H M ER
Sbjct: 634 CMTGRTPLAFRHFHEMLER 652



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 112/236 (47%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    D M+ +G++P+ F Y+T I           A +L   M + G   + VTYN +I+
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIID 526

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CKT +++++  L ++M+S G++P  +TY  L H   E   +  A KL + M    +  
Sbjct: 527 GLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQP 586

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   +   C+ G +  A   FR +  +  E     Y+ LI  LC  G+   A+  F
Sbjct: 587 SVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHF 646

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   GL PN  TY ++I G C +G    A  L+ +M   G+ P+  T N L  G
Sbjct: 647 HEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 702



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 120/270 (44%), Gaps = 36/270 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-------CMHN 54
           D+   +   M+Q  V P    Y+TL+D F   G  D A  L   M+  G          N
Sbjct: 219 DDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFN 278

Query: 55  VV-----------------------------TYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           VV                             TYN LI    +   V ++  L  EM ++G
Sbjct: 279 VVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEG 338

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I PTVVTYN + HGL +  Q E A   F EM+   +  +  TYN+ ++  CK G + EA 
Sbjct: 339 IMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEAL 398

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            L   LR       +  Y+ LIDG C++G L  A  L + +   G  P+V TY I+++G 
Sbjct: 399 WLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGS 458

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
                +  A + F +M +KG+ P+C  +NT
Sbjct: 459 RKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 1/211 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L ++M+ +G+ P+   Y+ +IDG C TG +  A+ L   M  +G   + +TY  LI+
Sbjct: 502 AFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIH 561

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +C+   + E+  L + M+S G++P+VVTY  L H       +  A   F +M    +  
Sbjct: 562 AHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEP 621

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYN  I  LC  G    A   F  +           Y+ LIDG C+ G    A  L+
Sbjct: 622 NEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLY 681

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             + + G+ P+  T+N +  GF ++G M  A
Sbjct: 682 FEMHQNGIPPDYCTHNALFKGF-DEGHMYHA 711



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 110/207 (53%), Gaps = 3/207 (1%)

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV--VTYNTLFHGLFEIHQVEHALKL 112
           +VTYNTL++ + K    +E+  L  EM ++G   ++  VT+N +   L     +E+A+KL
Sbjct: 237 IVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKL 296

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
            D M+ S   A + TYN  I  L + G++ +A  L   +        +  Y+ +I GL K
Sbjct: 297 VDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLK 355

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
             + E A   F  +  +GL+P+V+TYN +++ +C  G + +A  L  D+   G+AP  +T
Sbjct: 356 CEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLT 415

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           +NTL+ G  R  + ++   L   M E+
Sbjct: 416 YNTLIDGYCRLGDLAEARRLKEEMVEQ 442



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A RL   M+  G++P+   Y+ LI   C  G +  AR+L   M  +G   +VVTY  
Sbjct: 534 LKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTI 593

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  C+  ++  +   + +ML  GI P  +TYN L H L    +   A + F EM    
Sbjct: 594 LVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERG 653

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF 148
           +A    TY   IDG C+ G   +A  L+
Sbjct: 654 LAPNKYTYTLLIDGNCREGNWADAIRLY 681



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 3/163 (1%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM--QHSDVAAETSTYNTFIDG 134
           +Y EML   + PT+VTYNTL     +  + + A  L  EM  Q    +    T+N  I  
Sbjct: 224 VYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISF 283

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           L + G++  A +L  ++R+ K +     Y+ LI  L + G +  A  L   +   G+MP 
Sbjct: 284 LAREGHLENAVKLVDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPT 342

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           VVTYN +IHG     Q + A   F +M A G+ P+ +T+N+L+
Sbjct: 343 VVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLL 385



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+ PN   Y+ LI   C+TG    A   F  M   G   N  TY  LI+G C+  +
Sbjct: 614 MLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGN 673

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
             +++ LY EM   GI P   T+N LF G  E H + HA++  + +
Sbjct: 674 WADAIRLYFEMHQNGIPPDYCTHNALFKGFDEGH-MYHAIEYMENI 718



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 3/160 (1%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+ P V   N +   L +  + +    ++ EM    V     TYNT +D   K G   EA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 145 AELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           + L + +        +    ++ +I  L + G LE A +L  S+ R+    +  TYN +I
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLI 315

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
                 G + KA  L ++ME +G+ P  VT+N ++ G ++
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLK 355


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 133/257 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+DLM   G  P    Y+ ++DG C  G++D AREL  S+   GC  N V YNT++
Sbjct: 205 QAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVL 264

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G       E+   L +EM S+   P+  T + +   L +    + A++L ++M   D  
Sbjct: 265 KGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCT 324

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN  + GLC+ G++  A  L   ++   C+  I  Y+ L+ GLC   + E A +L
Sbjct: 325 ANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDL 384

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + +   +P+++T+N +I   C  G   +A ++F  M  KG  PN VT+++++ G  +
Sbjct: 385 MAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAK 444

Query: 243 NNETSKVVELLHRMDER 259
             +  + +ELL+ M  +
Sbjct: 445 TGKMEQSLELLNEMGSK 461



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 123/253 (48%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LLD M+ RG  P+   Y+ L++  C      +A EL   M + GC    VTYN +++G C
Sbjct: 174 LLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMC 233

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  DV+ +  L + + S G  P  V YNT+  GL    + E   +L  EM   +     +
Sbjct: 234 REGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEA 293

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T +  I  LC+ G    A  L   +    C   I  Y+ ++ GLC+ G ++ A  L  ++
Sbjct: 294 TLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNM 353

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  PN+ TYNI++ G CN  + + A DL   M      P+ +TFNT++    +   T
Sbjct: 354 QTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLT 413

Query: 247 SKVVELLHRMDER 259
            + VE+  +M E+
Sbjct: 414 MQAVEVFKQMPEK 426



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 1/255 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++   L+  M      P+    S +I   C  G   RA  L   M  + C  N+VTYN +
Sbjct: 274 EDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAV 333

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G C+   V+ +L L S M + G +P + TYN L  GL    + E A  L  +M  +D 
Sbjct: 334 VSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDC 393

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T+NT I  LC+ G  ++A E+F+ +    C      YS +I+GL K GK+E + E
Sbjct: 394 LPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLE 453

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G  P  + Y+++      + ++ +A  +   ++  G++P  V +NT++LG  
Sbjct: 454 LLNEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLC 512

Query: 242 RNNETSKVVELLHRM 256
           RN +T + +++L  M
Sbjct: 513 RNGKTDQAIDILSNM 527



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 113/276 (40%), Gaps = 32/276 (11%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-------------------------- 48
           G    A  YS L DG+C  G +D AR +   M +                          
Sbjct: 115 GSAATAVTYSALADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVL 174

Query: 49  ------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
                  GC  +VVTYN L+   CK +   +++ L   M  +G  PT VTYN +  G+  
Sbjct: 175 LDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCR 234

Query: 103 IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
              V++A +L + +        T  YNT + GL   G   +  EL   +    C      
Sbjct: 235 EGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEAT 294

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
            S +I  LC+ G  + A  L + + +     N+VTYN ++ G C  G +D A  L  +M+
Sbjct: 295 LSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQ 354

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             G  PN  T+N L+ G           +L+ +M +
Sbjct: 355 TDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQ 390



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 6/243 (2%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+  + + L+   C  G   R  +    ++  G     VTY+ L +GYC+   ++E+  +
Sbjct: 86  PDVALANRLVRDLCRRG---RPADAARVVEACGSAATAVTYSALADGYCRVGRLDEARRV 142

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
              M    + P+   YN L H L    QV  AL L D M +   A +  TYN  ++  CK
Sbjct: 143 VDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACK 199

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
                +A EL   +RV  C      Y+ ++DG+C+ G ++ A EL  SLP  G  PN V 
Sbjct: 200 GRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVN 259

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
           YN ++ G    G+ +   +L  +M ++   P+  T + ++    +     + + LL +M 
Sbjct: 260 YNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMS 319

Query: 258 ERN 260
           + +
Sbjct: 320 KHD 322



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 118/226 (52%), Gaps = 1/226 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M   G +PN F Y+ L+ G C     + A +L   M    C+ +++T+NT
Sbjct: 343 VDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNT 402

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   C+     +++ ++ +M  KG  P  VTY+++  GL +  ++E +L+L +EM    
Sbjct: 403 IIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG 462

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              E + Y+   + L +   +VEA ++   L+          Y+ ++ GLC+ GK + A 
Sbjct: 463 FNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAI 521

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           ++  ++   G MP+  TY+I+I G  ++G M +A +L   + ++ V
Sbjct: 522 DILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDV 567



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 43/170 (25%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING------------ 50
           +A  +   M ++G  PN+  YS++I+G   TG+++++ EL   M   G            
Sbjct: 415 QAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAE 474

Query: 51  CMH----------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
           C++                        V YNT++ G C+    ++++++ S M+S G  P
Sbjct: 475 CLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMP 534

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
              TY+ L  GL     ++ A +L   +   DV          +D L KN
Sbjct: 535 DESTYSILIQGLAHEGYMKEARELLSTLSSRDV---------IVDNLIKN 575


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 139/241 (57%), Gaps = 1/241 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +++LM +RG + N+ V + LIDGF    ++D A ++F  M   GC   VV+YN 
Sbjct: 442 LDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNI 501

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  + +   E+ +  +EML KG +P ++TY+TL  GL+E + ++ AL+L+ +   + 
Sbjct: 502 LINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTG 561

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   YN  I  LC +G + +A +L+ TLR  KC + +  ++ +++G  K+G  E A 
Sbjct: 562 HKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMAS 620

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +++  +    L P++++YNI + G C+ G++  A     D   +G  P  +T+N L+   
Sbjct: 621 KIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680

Query: 241 I 241
           I
Sbjct: 681 I 681



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 5/247 (2%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P    ++TL++ F  + +  RA   F   +      NV TYN L+   CK  + E+ 
Sbjct: 108 GCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKG 167

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L + M   G+ P  +TY TL  G+ +   +  AL++FDEM+   V  +   YN  IDG
Sbjct: 168 RGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDG 227

Query: 135 LCKNGYIVEAAELFRTLRVLKCEL---GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
             K G  V+A E++   R+L+ EL    + +Y+ +I GLCK G+     E+++ + +   
Sbjct: 228 FFKRGDFVKAGEMWE--RLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNER 285

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             ++ TY+ +IHG    G +  A  ++ +M  +GV P+ VT N ++ G  +     +  E
Sbjct: 286 KCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFE 345

Query: 252 LLHRMDE 258
           L   M +
Sbjct: 346 LWEEMGK 352



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 42/291 (14%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            E   + + M +   + + F YS LI G    G++  AR+++  M   G   +VVT N +
Sbjct: 271 SEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAM 330

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG CK  +VEE   L+ EM    +R  V +YN    GLFE  +V+ A+ L+D +  +D 
Sbjct: 331 LNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLWDGLLEAD- 388

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIG----- 174
              ++TY   + GLC NGY+  A ++       +  + ++  AYS LI+ LCK G     
Sbjct: 389 ---SATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEA 445

Query: 175 ------------------------------KLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                                         KL++A ++F+ +   G    VV+YNI+I+G
Sbjct: 446 DGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILING 505

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
                +  +A+D   +M  KG  P+ +T++TL+ G   +N     + L H+
Sbjct: 506 LLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQ 556



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 141/325 (43%), Gaps = 68/325 (20%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYNTLI 62
           A  + D M +RGV P+   Y+ +IDGF   G+  +A E++   +       +VV+YN +I
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMI 261

Query: 63  NGYCKTKDVEESLNL-----------------------------------YSEMLSKGIR 87
           +G CK     E L +                                   Y EM+ +G+R
Sbjct: 262 SGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVR 321

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD--------------------------- 120
           P VVT N + +GL +   VE   +L++EM                               
Sbjct: 322 PDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLW 381

Query: 121 ---VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGK 175
              + A+++TY   + GLC NGY+  A ++       +  + ++  AYS LI+ LCK G+
Sbjct: 382 DGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGR 441

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           L+ A  + + + + G   N    N++I GF    ++D A  +F +M  KG +   V++N 
Sbjct: 442 LDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNI 501

Query: 236 LMLGCIRNNETSKVVELLHRMDERN 260
           L+ G +R     +  + ++ M E+ 
Sbjct: 502 LINGLLRAERFREAYDCVNEMLEKG 526



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 133/259 (51%), Gaps = 6/259 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++   LL  M   G+ P+   Y TLI G   +G++  A E+F  M   G   +VV YN +
Sbjct: 165 EKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMI 224

Query: 62  INGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           I+G+ K  D  ++  ++  +L +  + P+VV+YN +  GL +  +    L++++ M+ ++
Sbjct: 225 IDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNE 284

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY+  I GL + G +  A +++  +        +   + +++GLCK G +E  +
Sbjct: 285 RKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECF 344

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL++ + +  L  NV +YNI + G   +G++D A  L+  +    +  +  T+  ++ G 
Sbjct: 345 ELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYGVVVHGL 399

Query: 241 IRNNETSKVVELLHRMDER 259
             N   ++ +++L   + R
Sbjct: 400 CWNGYVNRALQVLEEAEHR 418



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 42/271 (15%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ + M+ RGVRP+    + +++G C  G ++   EL+  M     + NV +YN  + 
Sbjct: 308 ARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMG-KCSLRNVRSYNIFLK 366

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G  +   V++++ L+  +L         TY  + HGL     V  AL++ +E +H +   
Sbjct: 367 GLFENGKVDDAMMLWDGLLEA----DSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGM 422

Query: 124 ETS--TYNTFIDGLCKNGYIVEA-----------------------------------AE 146
           +     Y++ I+ LCK G + EA                                    +
Sbjct: 423 DVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVK 482

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +FR +    C L + +Y+ LI+GL +  +   A++    +   G  P+++TY+ +I G  
Sbjct: 483 VFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLY 542

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
               MD A  L+      G  P+ + +N ++
Sbjct: 543 ESNMMDAALRLWHQFLDTGHKPDIIMYNIVI 573



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 2/201 (0%)

Query: 60  TLINGYCKTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           TL+  Y KT+   E+L+++  M    G  PT+ ++NTL +   E HQ   A   F   + 
Sbjct: 82  TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + V+    TYN  +  +CK G   +   L   +           Y  LI G+ K G L  
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD-MEAKGVAPNCVTFNTLM 237
           A E+F  +   G+ P+VV YN++I GF   G   KA +++   +  + V P+ V++N ++
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMI 261

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G  +    S+ +E+  RM +
Sbjct: 262 SGLCKCGRFSEGLEIWERMKK 282



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 130 TFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           T +    K     EA  +F+T+  V  C   I +++ L++   +  +   A   F+    
Sbjct: 82  TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             + PNV TYN+++   C  G+ +K   L   M   G++P+ +T+ TL+ G  ++ +   
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201

Query: 249 VVELLHRMDERN 260
            +E+   M ER 
Sbjct: 202 ALEVFDEMRERG 213


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 135/258 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E  R+   +I  G+  N F Y+ +I+ FC    +D A E F  M + G + N+VT+NTL
Sbjct: 411 EEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTL 470

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING+CK   ++++  L   +L  G++P + T++++  GL +I + E AL+ F EM    +
Sbjct: 471 INGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGI 530

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 YN  I  LC  G +  + +L R ++         +Y+ LI   C++ K+E A +
Sbjct: 531 NPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKK 590

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF S+ R GL P+  TY+  I      G++++A  +F  MEA G +P+    N ++   +
Sbjct: 591 LFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILV 650

Query: 242 RNNETSKVVELLHRMDER 259
           +     +   ++ R  ++
Sbjct: 651 QQEYVEEAQNIIERCRQK 668



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 121/231 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD AS     M  RGV PN   ++TLI+G C  G ID+AR+L  S+  NG   ++ T+++
Sbjct: 445 MDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSS 504

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G C+ K  EE+L  ++EM+  GI P  V YN L   L  I  V  ++KL   MQ   
Sbjct: 505 IVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEG 564

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +T +YN  I   C+   + +A +LF ++           YS  I+ L + G+LE A 
Sbjct: 565 ISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAK 624

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           ++F S+   G  P+    N++I        +++A ++      KG++ N +
Sbjct: 625 KMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLNSI 675



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 121/278 (43%), Gaps = 40/278 (14%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           F Y+TLI G C  G +D A  L   M   G   NV TY  LI G+C    V+E+  ++  
Sbjct: 215 FTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFET 274

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE-----------------------MQ 117
           M   G+ P   T   L HG+F       AL+L  E                       + 
Sbjct: 275 MKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLA 334

Query: 118 HSDVAAE-----------------TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
           ++ +A E                  S +N  +  L K   + E  ++F  LR    + GI
Sbjct: 335 NNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGI 394

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
            AY  LI+ L K    E    ++  L   GL+ NV +YN++I+ FC    MD A + F D
Sbjct: 395 GAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRD 454

Query: 221 MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           M+ +GV PN VTFNTL+ G  ++    K  +LL  + E
Sbjct: 455 MQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLE 492



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 118/244 (48%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P   V++ ++       E+    ++F  +   G    +  Y  LI    K +  EE 
Sbjct: 354 GYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEG 413

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             +Y +++S G+   V +YN + +       +++A + F +MQ   V     T+NT I+G
Sbjct: 414 DRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLING 473

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
            CK+G I +A +L  +L     +  I  +S ++DGLC+I + E A E F  +   G+ PN
Sbjct: 474 HCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPN 533

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            V YNI+I   C  G + ++  L   M+ +G++P+  ++N L+    R N+  K  +L  
Sbjct: 534 AVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFD 593

Query: 255 RMDE 258
            M  
Sbjct: 594 SMSR 597



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 89/186 (47%)

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           S++L  E+ + G R T      L      +    ++  +F ++    ++  T  YN  ID
Sbjct: 128 SVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALID 187

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            L K+  I  A   F+ +    C      Y+ LI G+CK+G ++ A  L + +   G  P
Sbjct: 188 ALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFP 247

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           NV TY ++I GFC   ++D+A  +F  M+  GV PN  T   L+ G  R  + SK +ELL
Sbjct: 248 NVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELL 307

Query: 254 HRMDER 259
               +R
Sbjct: 308 SEFLDR 313



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 17/223 (7%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+ P   +Y+ LID    +  ID A   F  M  + C+ +  TYNTLI+G CK   V+E+
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L L  +M  KG  P V TY  L  G     +V+ A  +F+ M+ S V    +T    + G
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHG 293

Query: 135 LCKNGYIVEAAELF-----------RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           + +     +A EL            R   +L C+  +  Y    + + K    E    L 
Sbjct: 294 VFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVL--YCLANNSMAK----EMVVFLR 347

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           + L R G  P    +N+++       ++ +  D+F  +  +GV
Sbjct: 348 RVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGV 390



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 22/256 (8%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G R    +   L+  +   G  + +  +F  +   G       YN LI+   K+  ++ +
Sbjct: 139 GFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLA 198

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
              + +M +        TYNTL HG+ ++  V+ AL+L  +M+         TY   I+G
Sbjct: 199 YLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEG 258

Query: 135 LCKNGYIVEAAELFRTLR---VLKCELGIEAYSCLIDGLCKIGKLETAWELF-------Q 184
            C    + EA  +F T++   V   E  + A   L+ G+ +      A EL        Q
Sbjct: 259 FCIASRVDEAFGVFETMKDSGVYPNEATVRA---LVHGVFRCVDPSKALELLSEFLDREQ 315

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD--MEAKGVAPNCVTFNTLMLGCIR 242
              RV  M   +  + +++   N+  M K   +FL   +   G  P    FN +M   ++
Sbjct: 316 EQERVHFM---LACDTVLYCLANNS-MAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVK 371

Query: 243 N---NETSKVVELLHR 255
                ET  V E+L +
Sbjct: 372 GAELRETCDVFEILRK 387



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 2/154 (1%)

Query: 108 HALKLFDEMQHSD--VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
           HA+K    + H +  +AA  S +    + L + G  + + +L R LR L   +  +    
Sbjct: 90  HAIKFHSWLSHVNPTLAAHNSVHRALRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCA 149

Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           L+    ++G    +  +F  +  +GL P    YN +I        +D A+  F  M A  
Sbjct: 150 LLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADN 209

Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              +  T+NTL+ G  +     + + L+ +M ++
Sbjct: 210 CVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDK 243


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 23/280 (8%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  M+  G+ P+ + Y+ ++DG C  G +  AR L   M  NG + + VTY+TL+
Sbjct: 344 EAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLL 403

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC    V E+ NL  EM+S    P   T N L H L++  ++  A  L  +M      
Sbjct: 404 HGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYG 463

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFR-----------------------TLRVLKCELG 159
            +T T N  I+ LC NG + +A E+                         T+   KC   
Sbjct: 464 VDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPD 523

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           +  YS +I GLCK G+L+ A + F  +   GL P+   Y+  IH FC +G++  A  +  
Sbjct: 524 LVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLK 583

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           DME +G      T+N+L+LG    N+  ++  L+  M E+
Sbjct: 584 DMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREK 623



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 133/268 (49%), Gaps = 12/268 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L D M  RG  PN F +  L+ G+C  G   +  EL   M   G + N V YNT
Sbjct: 163 LEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNT 222

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ--- 117
           LI+ +CK     ++  L  +M   G+ P V T+N+    L    ++  A ++F +MQ   
Sbjct: 223 LISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDE 282

Query: 118 -----HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
                H +V     TY   + G CK G + EA  L  T++     + +E+Y+  + GL +
Sbjct: 283 ELGLPHPNVI----TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIR 338

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            GKL  AW + + +  +G+ P++ +YNI++ G C +G +  A  L   M   G+ P+ VT
Sbjct: 339 NGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVT 398

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++TL+ G     +  +   LLH M   N
Sbjct: 399 YSTLLHGYCSKGKVFEANNLLHEMISNN 426



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 31/284 (10%)

Query: 3   EASRLL-DLMIQRGV---RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY 58
           EASR+  D+ I   +    PN   Y  ++ GFC  G ++ A+ L  +M  N    N+ +Y
Sbjct: 270 EASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESY 329

Query: 59  NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           N  + G  +   + E+  +  EML  GI P + +YN +  GL +   +  A  L   M  
Sbjct: 330 NIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIR 389

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
           + +  +T TY+T + G C  G + EA  L   +    C       + L+  L K G++  
Sbjct: 390 NGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISE 449

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA----------- 227
           A  L Q +   G   + VT NI+I+  CN+GQ+DKA ++   M   G A           
Sbjct: 450 AENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIG 509

Query: 228 ------------PNCVTFNTLMLGCIR----NNETSKVVELLHR 255
                       P+ VT++T++ G  +    ++   K +E++ +
Sbjct: 510 LVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSK 553



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 107/249 (42%), Gaps = 37/249 (14%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +    M+ +G++P++ +Y T I  FC  G+I  A ++   M+  GC   + TYN+
Sbjct: 540 LDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNS 599

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G      + E   L  EM  KG+ P V TYN + + L E  ++  A  + DEM    
Sbjct: 600 LILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKG 659

Query: 121 VAAETSTYNTFIDGLCK----------------------------------NGYIVEAAE 146
           ++   S++   I   CK                                   G + EA E
Sbjct: 660 ISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKE 719

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LF T      ++G   Y  LID LCK  KLE A ++   L   G   +  ++  +I GF 
Sbjct: 720 LFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGF- 778

Query: 207 NDGQMDKAH 215
             G+M   H
Sbjct: 779 --GKMGNKH 785



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 26/265 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING---------- 50
           + EA  LL  M ++G   +    + +I+  C  G++D+A E+   M  +G          
Sbjct: 447 ISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNS 506

Query: 51  -------------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF 97
                        C  ++VTY+T+I+G CK   ++++   + EM+SKG++P    Y+T  
Sbjct: 507 FIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFI 566

Query: 98  HGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
           H      ++  A ++  +M+         TYN+ I GL     I E   L   +R     
Sbjct: 567 HSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVS 626

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
             +  Y+ +++ LC+ G++  A  +   + + G+ PN+ ++ I+I  FC       +H++
Sbjct: 627 PDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEV 686

Query: 218 F---LDMEAKGVAPNCVTFNTLMLG 239
           F   L++     A   + FN L++G
Sbjct: 687 FEIALNVCGHKEALYTLMFNELLVG 711



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 1/251 (0%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D +  +   P+   YST+I G C  G +D A++ F+ M   G   +   Y+T I+ +C+ 
Sbjct: 513 DTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCRE 572

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             +  +  +  +M  +G   T+ TYN+L  GL   +Q+     L DEM+   V+ +  TY
Sbjct: 573 GKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTY 632

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  ++ LC+ G I +A  +   +        I ++  LI   CK    + + E+F+    
Sbjct: 633 NHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALN 692

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           V      + Y +M +     G++ +A +LF     +        +  L+    ++ +   
Sbjct: 693 VCGHKEAL-YTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEA 751

Query: 249 VVELLHRMDER 259
             ++LHR+ ++
Sbjct: 752 ASDVLHRLIDK 762



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 74/149 (49%)

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           +P++  YN L       ++VE    L+ +M  + V+ E  T+N  I  LC +G++ +A E
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           LF  +    CE     +  L+ G C+ G      EL   +  +G++PN V YN +I  FC
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            +G+   A  L   M   G+ P+  TFN+
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNS 257



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 2/124 (1%)

Query: 135 LCKNGYIVEAAELFRTLR--VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           L K+G+  +A   F++LR    + +  I  Y+ L+    +  ++E    L++ +    + 
Sbjct: 85  LAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVS 144

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P   T+N++I   C+ G ++ A +LF  M A+G  PN  TF  L+ G  R    SK +EL
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204

Query: 253 LHRM 256
           L +M
Sbjct: 205 LGQM 208


>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rubella]
          Length = 394

 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 122/218 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL   M   GV+P+ + YS LI+G C   ++D A ELF  M + G + N VT+ T
Sbjct: 175 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ +L +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 235 LIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 294

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY   IDG CK G +  A E  + +      L   AY+ LI GLC+ G+   A 
Sbjct: 295 LKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 354

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
           ++ + +  VGL P+  TY ++I+ FC  G + K   L 
Sbjct: 355 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 392



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 120/212 (56%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           +G   ++  +N L++ +CK +D+  + +++  +   G+RP+VV+YNTL +G   +  ++ 
Sbjct: 118 SGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDE 177

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
             +L   M  S V  +  TY+  I+GLCK   + +A ELF  + V         ++ LID
Sbjct: 178 GFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 237

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G CK G+++ A E+++ +    L+P+++TYN +I+G C  G + +AHDL  +M  KG+ P
Sbjct: 238 GHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 297

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           + +T+  L+ GC +  +     E   RM + N
Sbjct: 298 DKITYTALIDGCCKEGDLDTAFEHRKRMIQEN 329



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 136/250 (54%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   Y+TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 143 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 202

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ AL+++ +M    +  
Sbjct: 203 GLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLP 262

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT I GLCK G + +A +L   + +   +     Y+ LIDG CK G L+TA+E  
Sbjct: 263 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHR 322

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ P+  T+  ++    + 
Sbjct: 323 KRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKK 382

Query: 244 NETSKVVELL 253
            +  K  +LL
Sbjct: 383 GDVWKGSKLL 392



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC   +I  A+ +F ++   G   +VV+YNTL+NGY +  D
Sbjct: 115 ILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 174

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L S M + G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 175 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ LI GLCK G L+ A +L   +   G
Sbjct: 235 LIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 294

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G +D A +    M  + +  + V +  L+ G  +   +    
Sbjct: 295 LKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 354

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 355 KMLREM 360



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           R + +V+S LI  +  +G +  A E +     +       T   ++    K K  +    
Sbjct: 51  RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 110

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            Y E+L  G   ++  +N L H   +   +  A  +FD +    +     +YNT ++G  
Sbjct: 111 FYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           + G + E   L   +     +  +  YS LI+GLCK  K++ A ELF  +   GL+PN V
Sbjct: 171 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           T+  +I G C +G++D A +++  M ++ + P+ +T+NTL+ G  +  +  +  +L+  M
Sbjct: 231 TFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 290



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 35/184 (19%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A+ L D M+ +G+ PN   ++TLIDG C  G +D A E++  M     + +++TYNT
Sbjct: 210 MDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNT 269

Query: 61  LI-----------------------------------NGYCKTKDVEESLNLYSEMLSKG 85
           LI                                   +G CK  D++ +      M+ + 
Sbjct: 270 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQEN 329

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           IR   V Y  L  GL +  +   A K+  EM    +  +  TY   I+  CK G + + +
Sbjct: 330 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGS 389

Query: 146 ELFR 149
           +L +
Sbjct: 390 KLLK 393



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L+D M  +G++P+   Y+ LIDG C  G++D A E    M       + V Y  
Sbjct: 280 LKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           LI+G C+     ++  +  EMLS G++P   TY  + +   +   V    KL  E
Sbjct: 340 LISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 140/280 (50%), Gaps = 23/280 (8%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M+ +G+ PN + ++T++DG C  G I  AR +   M  +G   + VTY+TL+
Sbjct: 348 EAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLL 407

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C T  V ++ N+  EM+ +G  P   T N L H L++  ++  A KL  +M      
Sbjct: 408 HGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYD 467

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRV-----------------------LKCELG 159
            +  T N  IDGLCK+G + EA E+   + +                        KC   
Sbjct: 468 LDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPD 527

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           +  YS +I+GLCK G+L+ A + F  +    L P+ + Y+  IH FC  G++  A  +  
Sbjct: 528 LITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLK 587

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           DME +G   +  T+N+L+LG    N+  ++  LL  M E+
Sbjct: 588 DMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEK 627



 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 132/248 (53%), Gaps = 6/248 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D  S L   M+  GV P  +  + LI G C +G  + ARE+F  M + GC  N  ++  
Sbjct: 132 VDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGI 191

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GYC+      +L L   M S G++P  V YNTL        + E A +L + M+   
Sbjct: 192 LVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDG 251

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-----IEAYSCLIDGLCKIGK 175
           +  +  T+N+ I  LC  G I+EA+ +FR +++ + ELG     I  ++ +++G CK G 
Sbjct: 252 LFPDVVTFNSRISALCSAGKILEASRIFRDMQIDE-ELGLPRPNITTFNLMLEGFCKEGM 310

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           LE A  L +S+ R G +  + +YNI + G   +G++ +A     +M  KG+ PN  +FNT
Sbjct: 311 LEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNT 370

Query: 236 LMLGCIRN 243
           +M G  +N
Sbjct: 371 VMDGLCKN 378



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 139/261 (53%), Gaps = 4/261 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LLD M   GV+PN  +Y+TLI  FC  G  + A  L   M  +G   +VVT+N+ I+
Sbjct: 205 ALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRIS 264

Query: 64  GYCKTKDVEESLNLYSEML---SKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
             C    + E+  ++ +M      G+ RP + T+N +  G  +   +E A  L + M+ +
Sbjct: 265 ALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRN 324

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               E  +YN ++ GL +NG ++EA    + +     E  I +++ ++DGLCK G +  A
Sbjct: 325 GNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDA 384

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   +   G+ P+ VTY+ ++HG C+ G++ KA+++  +M  +G +PN  T N L+  
Sbjct: 385 RMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHS 444

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +     +  +LL +M+ER+
Sbjct: 445 LWKEGRIFEAEKLLQKMNERS 465



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 147/319 (46%), Gaps = 62/319 (19%)

Query: 3   EASRLL-DLMIQRGV---RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM------ 52
           EASR+  D+ I   +   RPN   ++ +++GFC  G ++ A+ L  SM  NG +      
Sbjct: 274 EASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESY 333

Query: 53  -----------------------------HNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
                                         N+ ++NT+++G CK   + ++  +   M+S
Sbjct: 334 NIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMIS 393

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
            GI P  VTY+TL HG     +V  A  +  EM     +  T T N  +  L K G I E
Sbjct: 394 SGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFE 453

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL-------------PRVG 190
           A +L + +     +L     + +IDGLCK GKL+ A E+ + +               +G
Sbjct: 454 AEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIG 513

Query: 191 L----------MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           L          +P+++TY+I+I+G C  G++D+A   F++M  K + P+ + ++T +   
Sbjct: 514 LVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSF 573

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ + S    +L  M++R
Sbjct: 574 CKHGKISSAFRVLKDMEKR 592



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 3/257 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +    M+ + + P++ +Y T I  FC  G+I  A  +   M+  GC  ++ TYN+
Sbjct: 544 LDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNS 603

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G      + E   L  +M  KGI P + TYN +   L E  +++ A  L DEM    
Sbjct: 604 LILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKG 663

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++   S++   I   CK        E+F     + C      YS + + L   G++  A 
Sbjct: 664 ISPNISSFRLLIKAFCKASDFGVVKEVFEIALSI-CGHKEALYSLMFNELLIGGEVSEAK 722

Query: 181 ELFQ-SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ELF  +L R   + N   YN +I   C D  ++ A D+   M  KG   +  +F  ++ G
Sbjct: 723 ELFDAALDRCFDLGN-FQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDG 781

Query: 240 CIRNNETSKVVELLHRM 256
             +  +     EL  RM
Sbjct: 782 LGKRGKKHDADELAERM 798



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 30/283 (10%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING------------ 50
           EA +LL  M +R    +    + +IDG C +G++D A E+   M I+G            
Sbjct: 453 EAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFI 512

Query: 51  -----------CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG 99
                      C+ +++TY+ +ING CK   ++E+   + EM+ K + P  + Y+T  H 
Sbjct: 513 GLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHS 572

Query: 100 LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG 159
             +  ++  A ++  +M+         TYN+ I GL     I E   L   ++       
Sbjct: 573 FCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPN 632

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND---GQMDKAHD 216
           I  Y+ +I  LC+ G+++ A  L   + + G+ PN+ ++ ++I  FC     G + +  +
Sbjct: 633 ICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFE 692

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           + L +     A   + FN L++G     E S+  EL     +R
Sbjct: 693 IALSICGHKEALYSLMFNELLIG----GEVSEAKELFDAALDR 731



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 12/236 (5%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P  ++Y+ +++      ++D    L+  M + G      T N LI G C +   E++  +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           + +M  KG RP   ++  L  G         AL+L D M    V      YNT I   C+
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ--------SLPRV 189
            G   EA  L   +R       +  ++  I  LC  GK+  A  +F+         LPR 
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPR- 292

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
              PN+ T+N+M+ GFC +G +++A  L   M+  G      ++N  +LG +RN +
Sbjct: 293 ---PNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGK 345



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%)

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           YN  ++   +   +   + L++ + V          + LI GLC  G+ E A E+F  + 
Sbjct: 119 YNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMG 178

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G  PN  ++ I++ G+C  G   +A +L   M + GV PN V +NTL+    R     
Sbjct: 179 VKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNE 238

Query: 248 KVVELLHRMDE 258
           +   L+ RM E
Sbjct: 239 EAERLVERMRE 249


>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 376

 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM +     ++  Y  L+ GFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++++++++ ++M+  G +P    YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVR 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA +L + +        +  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+   A  L+JDM     APN VT NTLM G 
Sbjct: 255 QLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARV 330



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 127/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ +L  EML KG+ P+V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G    A  L+  +   KC   +  ++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K + P  +T
Sbjct: 325 VIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRKKIVPTKIT 376



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 130/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++  +L++  Q+G   +AF YS +I+G C    +D+A  +   M  +GC  N   YNT
Sbjct: 110 INKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  EM    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK + A 
Sbjct: 230 LNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+VT+N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYJDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N     +  LH
Sbjct: 350 CSCNRICDAILFLH 363



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 119/229 (51%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M ++G R +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGNEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ SD   ++ TY   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK   L+ A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + A  +F +M     +P  +T+NTL+ G  +N    +  +L+  M E+
Sbjct: 180 FEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEK 228


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 136/259 (52%), Gaps = 2/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A RLL++M   G++P+A+ Y+ LI GF   G+++ A  LF  M  +G   N VTY  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY     V+++L L+ +M+  G  P+  TYN +  G  + + +  A     +M    
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA- 179
           +     TY +FIDGLC+NG    A ++F  +        +  YS LI GLC+ G+ E A 
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642

Query: 180 -WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            + L   L   G  PNV TY  ++ G C +G+  +A  L + M+ KG+ P+   +  L++
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLI 702

Query: 239 GCIRNNETSKVVELLHRMD 257
           G  +N +    + + + MD
Sbjct: 703 GECKNLKVESALNIFYSMD 721



 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 131/254 (51%), Gaps = 8/254 (3%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+ P    Y+ LI+  C+ G  + A  +F  M  +G + +  TYN +I  +C   D
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +++++ ++ +ML  G  P V+TYNTL +G  +   + +A++L + M+ + +  +  TY  
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWELFQSL 186
            I G  + G +  A  LF  +     E GI      Y+ +IDG   + K++ A  LF  +
Sbjct: 488 LISGFSRGGKLEHATSLFYGMM----EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G +P+  TYN+MI GF     + +A +    M  +G+ PN +T+ + + G  RN  T
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRT 603

Query: 247 SKVVELLHRMDERN 260
               ++ H M++RN
Sbjct: 604 GLAFKIFHEMEKRN 617



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 124/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L+ M+Q+G+ P  + Y+  +   C  G    A EL   M   GC+ N+ T+  
Sbjct: 288 LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  +    E ++ LY +ML+ G+ PT VTYN L + L    + E A  +F  M    
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYN  I   C  G I +A  +F  +        +  Y+ LI G CK G L  A 
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   GL P+  TY  +I GF   G+++ A  LF  M   G++PN VT+  ++ G 
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 241 IRNNETSKVVELLHRMDE 258
               +    + L  +M E
Sbjct: 528 FNLAKVDDALALFWKMVE 545



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 121/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M+  G+RP+   ++T+I+  C  G +  A+ +   +       N  TY +
Sbjct: 183 VDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTS 242

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+  +++ +  ++  M+  G  P  VTY+TL +GL    ++E A+ + +EM    
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   +  LC  G   EA EL   ++   C   I+ ++ LI GL + GK E A 
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L+  +   GL+P  VTYN +I+  C +G+ + A  +F  M + G  P+  T+N ++
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 37/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+ L   M++ G+ PN   Y+ +IDG+    ++D A  LF  M  +G + +  TYN 
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ--- 117
           +I+G+ KT  + E+ N   +M+ +G+ P V+TY +   GL    +   A K+F EM+   
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 118 ----------------------------------HSDVAAETSTYNTFIDGLCKNGYIVE 143
                                             H        TY T + GLC  G   E
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A +L  +++    +   E Y  L+ G CK  K+E+A  +F S+  +G   ++  Y  +I 
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALIC 737

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             C +  +++A  +F  M  K    + V +  L+ G ++  ET   ++LLH M+ RN
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRN 794



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 5/226 (2%)

Query: 34  GEIDRARELFVSMDINGCM---HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           GE+ R  + F+S +IN      + + ++ TL+    K   V+ + ++Y +ML+ GIRP++
Sbjct: 145 GEVKRVTQ-FLS-EINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSL 202

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +T+NT+ + L +  +V+ A  +   +   D      TY + I G C+N  +  A  +F  
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C+     YS LI+GLC  G+LE A ++ + + + G+ P V TY I +   C+ G 
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +A +L   M+ +G  PN  TF  L+ G  R+ +    + L H+M
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 2/235 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA      M+++G+ PN   Y++ IDG C  G    A ++F  M+      N+ TY++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 61  LINGYCKTKDVE--ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           LI G C+    E  E  NL + +   G  P V TY TL  GL    +   A +L   MQ 
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +      Y   + G CKN  +  A  +F ++  L  +L +  Y  LI  LCK   +E 
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           A  +FQ++       + V + +++ G   +G+ D    L   ME++    N  T+
Sbjct: 748 AQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 91/171 (53%)

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T+ ++ TL   L +   V+ A  ++ +M +S +     T+NT I+ LCK G + EA  + 
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +           Y+ LI G C+   L+ A+ +F  + + G  PN VTY+ +I+G C++
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G++++A D+  +M  KG+ P   T+   ++       +S+ VELL +M +R
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKR 336



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 3/192 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LL  +   G  PN   Y+TL+ G C  G    A +L VSM   G   +   Y  L+
Sbjct: 642 EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CK   VE +LN++  M + G +  +  Y  L   L + + +E A  +F  M      
Sbjct: 702 IGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWN 761

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           ++   +   +DGL K G      +L   +    C L  + Y  L     ++  L+ A ++
Sbjct: 762 SDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR---ELSALDCAIKI 818

Query: 183 FQSLPRVGLMPN 194
            Q   ++G++ +
Sbjct: 819 PQISQQLGIVKD 830


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  149 bits (377), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 140/258 (54%), Gaps = 2/258 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTL 61
           +A  L++ M + G  P+   ++ L+DG C   +++R  +L   +  +G CM NVVTY ++
Sbjct: 236 KALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSV 295

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GYCK   +E++L++Y++ML  G RP  VTYN L +G  +   +E A++++ ++     
Sbjct: 296 ISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRC 355

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T+++ IDG C+ G + +A  +++ +     +  +  +S +I  LCK  +   A  
Sbjct: 356 PPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALG 415

Query: 182 LFQSLP-RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             + L  R  + P    YN +I   C  GQ+++A+ +  DME KG  P+  T+  L++G 
Sbjct: 416 FLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGH 475

Query: 241 IRNNETSKVVELLHRMDE 258
                  + + L H+M E
Sbjct: 476 CMKGRIPEAITLFHKMVE 493



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 114/220 (51%), Gaps = 1/220 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  + + M++ G RPN   Y+ LI+G+    +++ A  ++  + +  C  +VVT+++
Sbjct: 305 MEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSS 364

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HS 119
           LI+GYC+   +++++ ++ EM    I+P V T++ + H L + ++   AL    E+   +
Sbjct: 365 LIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRA 424

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           D+A +T  YN  ID LCK G + EA  +   +    C      Y+ LI G C  G++  A
Sbjct: 425 DIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEA 484

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
             LF  +   G  P+ +T N  I      G  ++   + L
Sbjct: 485 ITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIML 524



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYN 59
           +D A  LL    Q G R   + Y+ L++     G    A  LF S   +G    +  ++N
Sbjct: 163 LDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFN 222

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +I G C+  + +++L L   M   G  P  +T+N L  GL    QV     L   +Q  
Sbjct: 223 VVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRD 282

Query: 120 DVA-AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
            V      TY + I G CK G + +A  ++  +           Y+ LI+G  K   +E+
Sbjct: 283 GVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMES 342

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +++ L      P+VVT++ +I G+C  GQ+D A  ++ +M    + PN  TF+ ++ 
Sbjct: 343 AVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIH 402

Query: 239 GCIRNNETSKVVELLHRMDER 259
              + N +++ +  L  ++ R
Sbjct: 403 SLCKQNRSAEALGFLRELNMR 423



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 5/262 (1%)

Query: 3   EASRLLDLMI-QRGVRPNAFVYSTLIDGFCL-TGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A +L D M  Q G  P+A V+ + + G C   G +D A  L       G       YN 
Sbjct: 129 DALKLFDQMTDQSGYLPDA-VFFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNN 187

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L+N        ++++ L+   +  G+  P   ++N +  G+  +   + AL+L + M   
Sbjct: 188 LLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEF 247

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLET 178
             + +T T+N  +DGLC+   +    +L R L R   C   +  Y+ +I G CK G++E 
Sbjct: 248 GCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMED 307

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  ++  +   G  PN VTYN++I+G+     M+ A  ++  +  +   P+ VTF++L+ 
Sbjct: 308 ALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLID 367

Query: 239 GCIRNNETSKVVELLHRMDERN 260
           G  R  +    + +   M + +
Sbjct: 368 GYCRCGQLDDAMRIWKEMGQHH 389



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 10/193 (5%)

Query: 73  ESLNLYSEMLSK--GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +L ++S + S    + P+  +Y+ +   L    +   ALKLFD+M         + + +
Sbjct: 92  SALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS 151

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELG--IE--AYSCLIDGLCKIGKLETAWELFQSL 186
           F+ G C N  +++AA    TL     + G  IE  AY+ L++ L   G+ + A  LF+S 
Sbjct: 152 FVAGSCTNAGLLDAAV---TLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESW 208

Query: 187 PRVGLM-PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
            + GL  P+  ++N++I G C  G   KA +L   M   G +P+ +T N L+ G  R  +
Sbjct: 209 IQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQ 268

Query: 246 TSKVVELLHRMDE 258
            ++  +LL R+  
Sbjct: 269 VNRGHDLLRRLQR 281


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 136/259 (52%), Gaps = 2/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A RLL++M   G++P+A+ Y+ LI GF   G+++ A  LF  M  +G   N VTY  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY     V+++L L+ +M+  G  P+  TYN +  G  + + +  A     +M    
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA- 179
           +     TY +FIDGLC+NG    A ++F  +        +  YS LI GLC+ G+ E A 
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642

Query: 180 -WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            + L   L   G  PNV TY  ++ G C +G+  +A  L + M+ KG+ P+   +  L++
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLI 702

Query: 239 GCIRNNETSKVVELLHRMD 257
           G  +N +    + + + MD
Sbjct: 703 GECKNLKVESALNIFYSMD 721



 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 131/254 (51%), Gaps = 8/254 (3%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+ P    Y+ LI+  C+ G  + A  +F  M  +G + +  TYN +I  +C   D
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +++++ ++ +ML  G  P V+TYNTL +G  +   + +A++L + M+ + +  +  TY  
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWELFQSL 186
            I G  + G +  A  LF  +     E GI      Y+ +IDG   + K++ A  LF  +
Sbjct: 488 LISGFSRGGKLEHATSLFYGMM----EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G +P+  TYN+MI GF     + +A +    M  +G+ PN +T+ + + G  RN  T
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRT 603

Query: 247 SKVVELLHRMDERN 260
               ++ H M++RN
Sbjct: 604 GLAFKIFHEMEKRN 617



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 124/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L+ M+Q+G+ P  + Y+  +   C  G    A EL   M   GC+ N+ T+  
Sbjct: 288 LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  +    E ++ LY +ML+ G+ PT VTYN L + L    + E A  +F  M    
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T TYN  I   C  G I +A  +F  +        +  Y+ LI G CK G L  A 
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   GL P+  TY  +I GF   G+++ A  LF  M   G++PN VT+  ++ G 
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 241 IRNNETSKVVELLHRMDE 258
               +    + L  +M E
Sbjct: 528 FNLAKVDDALALFWKMVE 545



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 121/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M+  G+RP+   ++T+I+  C  G +  A+ +   +       N  TY +
Sbjct: 183 VDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTS 242

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+  +++ +  ++  M+  G  P  VTY+TL +GL    ++E A+ + +EM    
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   +  LC  G   EA EL   ++   C   I+ ++ LI GL + GK E A 
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L+  +   GL+P  VTYN +I+  C +G+ + A  +F  M + G  P+  T+N ++
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 37/297 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A+ L   M++ G+ PN   Y+ +IDG+    ++D A  LF  M  +G + +  TYN 
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ--- 117
           +I+G+ KT  + E+ N   +M+ +G+ P V+TY +   GL    +   A K+F EM+   
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 118 ----------------------------------HSDVAAETSTYNTFIDGLCKNGYIVE 143
                                             H        TY T + GLC  G   E
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A +L  +++    +   E Y  L+ G CK  K+E+A  +F S+  +G   ++  Y  +I 
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALIC 737

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             C +  +++A  +F  M  K    + V +  L+ G ++  ET   ++LLH M+ RN
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRN 794



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 5/226 (2%)

Query: 34  GEIDRARELFVSMDINGCM---HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           GE+ R  + F+S +IN      + + ++ TL+    K   V+ + ++Y +ML+ GIRP++
Sbjct: 145 GEVKRVTQ-FLS-EINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSL 202

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           +T+NT+ + L +  +V+ A  +   +   D      TY + I G C+N  +  A  +F  
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +    C+     YS LI+GLC  G+LE A ++ + + + G+ P V TY I +   C+ G 
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             +A +L   M+ +G  PN  TF  L+ G  R+ +    + L H+M
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 2/235 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA      M+++G+ PN   Y++ IDG C  G    A ++F  M+      N+ TY++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 61  LINGYCKTKDVE--ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
           LI G C+    E  E  NL + +   G  P V TY TL  GL    +   A +L   MQ 
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +      Y   + G CKN  +  A  +F ++  L  +L +  Y  LI  LCK   +E 
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           A  +FQ++       + V + +++ G   +G+ D    L   ME++    N  T+
Sbjct: 748 AQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 91/171 (53%)

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T+ ++ TL   L +   V+ A  ++ +M +S +     T+NT I+ LCK G + EA  + 
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +           Y+ LI G C+   L+ A+ +F  + + G  PN VTY+ +I+G C++
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G++++A D+  +M  KG+ P   T+   ++       +S+ VELL +M +R
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKR 336



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 3/192 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LL  +   G  PN   Y+TL+ G C  G    A +L VSM   G   +   Y  L+
Sbjct: 642 EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CK   VE +LN++  M + G +  +  Y  L   L + + +E A  +F  M      
Sbjct: 702 IGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWN 761

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           ++   +   +DGL K G      +L   +    C L  + Y  L     ++  L+ A ++
Sbjct: 762 SDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR---ELSALDCAIKI 818

Query: 183 FQSLPRVGLMPN 194
            Q   ++G++ +
Sbjct: 819 PQISQQLGIVKD 830


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 126/238 (52%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + +A ++ D+M +     PN+  YS LI G C  G ++ A  L   M   GC  +  TY 
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI   C    ++++ NL+ EM+ +G +P V TY  L  GL    ++E A  +  +M   
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     TYN  I+G CK+G +V A EL   +    C+  +  ++ L++GLC++GK   A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             L + +   GL P++V+YN++I G C +G M+ A+ L   M    + P+C+TF  ++
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L D M ++G +P+   Y+ LI   C  G ID+A  LF  M   GC  NV TY  
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+   +EE+  +  +M+   I P+V+TYN L +G  +  +V  A +L   M+   
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+N  ++GLC+ G   +A  L + +        I +Y+ LIDGLC+ G + TA+
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L  S+    + P+ +T+  +I+ FC  G+ D A      M  KG++ + VT  TL+ G 
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 241 IRNNETSKVVELLHRM 256
            +  +T   + +L  +
Sbjct: 522 CKVGKTRDALFILETL 537



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 131/237 (55%), Gaps = 5/237 (2%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           Y T+++  C  G  + A E+F+S  +  G + +     +L+ G+C+  ++ ++L ++ ++
Sbjct: 198 YRTIVNALCKNGYTEAA-EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-DV 255

Query: 82  LSKGI--RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
           +SK +   P  V+Y+ L HGL E+ ++E A  L D+M        T TY   I  LC  G
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            I +A  LF  +    C+  +  Y+ LIDGLC+ GK+E A  + + + +  + P+V+TYN
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +I+G+C DG++  A +L   ME +   PN  TFN LM G  R  +  K V LL RM
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 135/291 (46%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L D MI RG +PN   Y+ LIDG C  G+I+ A  +   M  +    +V+TYN 
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK   V  +  L + M  +  +P V T+N L  GL  + +   A+ L   M  + 
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +  +YN  IDGLC+ G++  A +L  ++     E     ++ +I+  CK GK + A 
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA----------------HDL--FLDME 222
                + R G+  + VT   +I G C  G+   A                H L   LDM 
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556

Query: 223 AK-----------------GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +K                 G+ P+ VT+ TL+ G IR+ + +    +L  M
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 130/257 (50%), Gaps = 1/257 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYNT 60
           + A   +  +++ G   ++ + ++L+ GFC    +  A ++F  M     C  N V+Y+ 
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSI 271

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C+   +EE+  L  +M  KG +P+  TY  L   L +   ++ A  LFDEM    
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   IDGLC++G I EA  + R +   +    +  Y+ LI+G CK G++  A+
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   + +    PNV T+N ++ G C  G+  KA  L   M   G++P+ V++N L+ G 
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451

Query: 241 IRNNETSKVVELLHRMD 257
            R    +   +LL  M+
Sbjct: 452 CREGHMNTAYKLLSSMN 468



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 127/257 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  M+  G+ P+   Y+ LIDG C  G ++ A +L  SM+      + +T+  +I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           N +CK    + +      ML KGI    VT  TL  G+ ++ +   AL + + +    + 
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               + N  +D L K   + E   +   +  L     +  Y+ L+DGL + G +  ++ +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G +PNV  Y I+I+G C  G++++A  L   M+  GV+PN VT+  ++ G + 
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663

Query: 243 NNETSKVVELLHRMDER 259
           N +  + +E +  M ER
Sbjct: 664 NGKLDRALETVRAMVER 680



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 7/249 (2%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVS---MDINGCMHNVVTYNTLINGYCKTKDV 71
           G R N   YS+L+       ++D     +V+   M+ +G +  ++ Y T++N  CK    
Sbjct: 155 GFRLNYPCYSSLLMSL---AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYT 211

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS-TYNT 130
           E +    S++L  G         +L  G      +  ALK+FD M      A  S +Y+ 
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSI 271

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I GLC+ G + EA  L   +    C+     Y+ LI  LC  G ++ A+ LF  +   G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             PNV TY ++I G C DG++++A+ +   M    + P+ +T+N L+ G  ++       
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391

Query: 251 ELLHRMDER 259
           ELL  M++R
Sbjct: 392 ELLTVMEKR 400



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 112/280 (40%), Gaps = 57/280 (20%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---ELFVSMDI---------- 48
           D AS  L LM+++G+  +    +TLIDG C  G+   A    E  V M I          
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552

Query: 49  -----NGC-----------------MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                 GC                 + +VVTY TL++G  ++ D+  S  +   M   G 
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P V  Y  + +GL +  +VE A KL   MQ S V+    TY   + G   NG +  A E
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672

Query: 147 LFRTLRVLKCELGIEAYSCLIDG---------------LCKIGKLETAWELFQSLPRV-- 189
             R +     EL    YS L+ G               +  I   ET  E    L  V  
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732

Query: 190 ---GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
              G +  +  +  ++   C +G+ D+++DL  ++  +GV
Sbjct: 733 QLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGV 770


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 133/255 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  LL  M Q+    +   ++ L+D FC  G +DR  EL   M  +GCM +V+TY T+
Sbjct: 318 EKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTV 377

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING+CK   ++E++ L   M S G +P  ++Y  +  GL    +   A +L   M     
Sbjct: 378 INGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGC 437

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+NT I+ LCK G + +A EL + + V  C   + +YS +IDGL K GK E A E
Sbjct: 438 LPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALE 497

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G+ PNV+TY+ M      +G++DK   +F +++   +  + V +N ++    
Sbjct: 498 LLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLC 557

Query: 242 RNNETSKVVELLHRM 256
           +  ET   ++ L  M
Sbjct: 558 KRRETDLAIDFLAYM 572



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 132/259 (50%), Gaps = 3/259 (1%)

Query: 1   MDEASRL---LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           MDE  ++   L  M Q G  P+  +Y+T+IDG C  G  + A E+   M   G   NVV 
Sbjct: 244 MDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVC 303

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YNT++ G C     E++  L +EM  K      VT+N L     +   V+  ++L ++M 
Sbjct: 304 YNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 363

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                 +  TY T I+G CK G I EA  L + +    C+    +Y+ ++ GLC   +  
Sbjct: 364 EHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWV 423

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A EL   + + G +PN VT+N +I+  C  G +++A +L   M   G  P+ ++++T++
Sbjct: 424 DAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVI 483

Query: 238 LGCIRNNETSKVVELLHRM 256
            G  +  +T + +ELL+ M
Sbjct: 484 DGLGKAGKTEEALELLNVM 502



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 10/266 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFC----------LTGEIDRARELFVSMDING 50
           +DE   +L  +   G   +   Y+ ++ G C          L  E+ +  E    M  +G
Sbjct: 202 VDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHG 261

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  ++  Y T+I+G CK    E +  + S M S G++P VV YNT+  G+    + E A 
Sbjct: 262 CTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAE 321

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +L  EM   +   +  T+N  +D  C+NG +    EL   +    C   +  Y+ +I+G 
Sbjct: 322 ELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 381

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK G ++ A  L +++P  G  PN ++Y I++ G C+  +   A +L   M  +G  PN 
Sbjct: 382 CKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNP 441

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRM 256
           VTFNT++    +     + +ELL +M
Sbjct: 442 VTFNTIINFLCKKGLVEQAIELLKQM 467



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 127/255 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A+ +L  M   G++PN   Y+T++ G C     ++A EL   M    C  + VT+N L++
Sbjct: 285 ANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVD 344

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +C+   V+  + L  +ML  G  P V+TY T+ +G  +   ++ A+ L   M       
Sbjct: 345 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKP 404

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
            T +Y   + GLC     V+A EL   +    C      ++ +I+ LCK G +E A EL 
Sbjct: 405 NTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELL 464

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + +   G  P++++Y+ +I G    G+ ++A +L   M  KG+ PN +T++++     R 
Sbjct: 465 KQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALARE 524

Query: 244 NETSKVVELLHRMDE 258
               KV+++   + +
Sbjct: 525 GRIDKVIQMFDNIQD 539



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 112/221 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M   G +PN   Y+ ++ G C T     A EL   M   GC+ N VT+NT
Sbjct: 387 IDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNT 446

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK   VE+++ L  +ML  G  P +++Y+T+  GL +  + E AL+L + M +  
Sbjct: 447 IINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 506

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++    L + G I +  ++F  ++          Y+ +I  LCK  + + A 
Sbjct: 507 ITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAI 566

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           +    +   G MPN  TY  +I G  ++G + +A DL  ++
Sbjct: 567 DFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 13/248 (5%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ ++ G+C  G+++ AR L  ++ +     N  TY  ++ G C    + ++L +  EM 
Sbjct: 87  YNAMVAGYCRVGQVEAARRLAAAVPVP---PNAYTYFPVVRGLCGRGRIADALAVLDEMT 143

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
           S+   P    Y+ +            AL++ + +       +T   N  I+ +C  G + 
Sbjct: 144 SRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVD 203

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV----------GLM 192
           E  E+ R L +  CE  I +Y+ ++ GLC   +     EL   + +V          G  
Sbjct: 204 EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCT 263

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P++  Y  +I G C +G  + A+++   M + G+ PN V +NT++ G    +   K  EL
Sbjct: 264 PDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEEL 323

Query: 253 LHRMDERN 260
           L  M ++N
Sbjct: 324 LTEMYQKN 331



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 12/266 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+R L   +   V PNA+ Y  ++ G C  G I  A  +   M    C+     Y+ +I
Sbjct: 101 EAARRLAAAVP--VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVII 158

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C++     +L +   + +KG        N + + + +   V+  L++  ++      
Sbjct: 159 ESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCE 218

Query: 123 AETSTYNTFIDGLCKNGY----------IVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
           A+  +YN  + GLC              +V+  E    +    C   I  Y+ +IDG+CK
Sbjct: 219 ADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICK 278

Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            G  E A E+   +P  GL PNVV YN ++ G C+  + +KA +L  +M  K    + VT
Sbjct: 279 EGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVT 338

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDE 258
           FN L+    +N    +V+ELL +M E
Sbjct: 339 FNILVDFFCQNGLVDRVIELLEQMLE 364



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+  ++ D +    +R +A +Y+ +I   C   E D A +    M  NGCM N  TY  
Sbjct: 527 IDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTA 586

Query: 61  LINGYCKTKDVEESLNLYSEMLSK 84
           LI G      + E+ +L SE+ S+
Sbjct: 587 LIKGLASEGLLCEAQDLLSELCSR 610



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           S LI  LC  G+   A    ++L   G    VV YN M+ G+C  GQ++ A  L     A
Sbjct: 56  SALIRSLCVAGRTADA---VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRL---AAA 109

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             V PN  T+  ++ G       +  + +L  M  R+
Sbjct: 110 VPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRS 146


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 125/247 (50%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
            M++  VRP+   +S +IDG C TG++D A  LF  M   GC  NV+ YN LI+    + 
Sbjct: 447 FMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSN 506

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            +EE   L  EM   G RPT  T+N++F  L     V  AL +  EM+          Y 
Sbjct: 507 RLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYT 566

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             +  LCK     EA      +        I AYS  IDG  KI  ++ A E+F+ +   
Sbjct: 567 LLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICAR 626

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+VV YN +I+GFC   ++ +AHD+  +M AKG+ P+ VT+N L+ G  +N +  + 
Sbjct: 627 GYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQA 686

Query: 250 VELLHRM 256
              L RM
Sbjct: 687 FHCLSRM 693



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 8/263 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFC----LTGEIDRARELFVSMDINGCMHNVV 56
           ++E   LL  M   G RP  F ++++    C    +TG +D  RE    M ++G    + 
Sbjct: 508 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVRE----MRVHGHEPWIK 563

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            Y  L+   CK K   E+ N  +EM+ +G  P +V Y+    G  +I  V+ AL++F ++
Sbjct: 564 HYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDI 623

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                  +   YNT I+G CK   + EA ++   +        +  Y+ LIDG CK G +
Sbjct: 624 CARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDI 683

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A+     +      PNV+TY  +I G CN G+ D A  L+ +M  KG +PN ++F  L
Sbjct: 684 DQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIAL 743

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G  +       +     M ER
Sbjct: 744 IHGLCKCGWPDAALLYFREMGER 766



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 20/273 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L++ M   G+R N   +  LI GF     +D+A +LF  M  +G   +V  Y+ 
Sbjct: 284 VDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDA 343

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C  K++E++L+L SEM   GI P +   + L     E  +V+    + + ++  D
Sbjct: 344 LIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSE--EVDIYRLIEERLEDLD 401

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL---------RVLKCELGIE-------AYS 164
             A    YN+ ++GL     + +A  L R +          V K  +  E       ++S
Sbjct: 402 TEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFS 461

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            +IDGLC  GKL+ A  LF+ + RVG   NV+ YN +I    N  ++++ + L  +M+  
Sbjct: 462 IVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGS 521

Query: 225 GVAPNCVTFNTLMLGCI-RNNETSKVVELLHRM 256
           G  P   T N++  GC+ R  + +  ++++  M
Sbjct: 522 GFRPTQFTHNSI-FGCLCRREDVTGALDMVREM 553



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 58/302 (19%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L  M   G  P+ +  ++++  +C + + D+A  +F  +   G +   V  + L+  + K
Sbjct: 222 LKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHV-LSILVLTFSK 280

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             +V+++  L   M   GIR    T+  L HG     +V+ AL+LF +MQ S  A + S 
Sbjct: 281 CGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSV 340

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA------------------------- 162
           Y+  I GLC    I +A  L   ++    ELGI+                          
Sbjct: 341 YDALIGGLCAKKEIEKALHLLSEMK----ELGIDPDIQILSKLIAYCSEEVDIYRLIEER 396

Query: 163 ------------YSCLIDGLCKIGKLETAWELFQSLP----------------RVGLMPN 194
                       Y+ +++GL     ++ A+ L +++                 +  + P+
Sbjct: 397 LEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPD 456

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             +++I+I G CN G++D A  LF DM   G   N + +N L+     +N   +   LL 
Sbjct: 457 TTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLK 516

Query: 255 RM 256
            M
Sbjct: 517 EM 518



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 99/220 (45%), Gaps = 2/220 (0%)

Query: 33  TGEIDRARELFVSMDI-NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
           TG ++ A  LF  + +   C+ N  ++N L+    K+  ++       EM   G  P   
Sbjct: 176 TGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKY 235

Query: 92  TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           T  ++        + + AL +F+E+ +     +    +  +    K G + +A EL   +
Sbjct: 236 TLTSVLQAYCNSRKFDKALSVFNEI-YGRGWVDGHVLSILVLTFSKCGEVDKAFELIERM 294

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
             L   L  + +  LI G  +  +++ A +LF+ + + G  P+V  Y+ +I G C   ++
Sbjct: 295 EDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEI 354

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +KA  L  +M+  G+ P+    + L+  C    +  +++E
Sbjct: 355 EKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIE 394



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 10/251 (3%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI--NGCMHNVVTYNTLINGYCKTKD 70
           Q G   N + Y+ +    CL+     A    +SMDI  + C  +       I     T  
Sbjct: 121 QGGFNHNCYTYNAMAS--CLSHARQNAPLSLLSMDIVNSRCAMSPGALGFFIRCLGSTGL 178

Query: 71  VEESLNLYSEMLSKGIR---PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           VEE+  L+ ++  K +R   P   ++N L   + +   ++       EM  S    +  T
Sbjct: 179 VEEANLLFDQV--KMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYT 236

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
             + +   C +    +A  +F  +       G    S L+    K G+++ A+EL + + 
Sbjct: 237 LTSVLQAYCNSRKFDKALSVFNEIYGRGWVDG-HVLSILVLTFSKCGEVDKAFELIERME 295

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
            +G+  N  T+ ++IHGF    ++DKA  LF  M+  G AP+   ++ L+ G     E  
Sbjct: 296 DLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIE 355

Query: 248 KVVELLHRMDE 258
           K + LL  M E
Sbjct: 356 KALHLLSEMKE 366



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 1/116 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   L  M+ +   PN   Y+TLIDG C  G  D A  L+  M   GC  N +++  
Sbjct: 683 IDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIA 742

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           LI+G CK    + +L  + EM  +   P  + Y  L            A ++  EM
Sbjct: 743 LIHGLCKCGWPDAALLYFREMGERET-PDTIVYVALITSFISNKNPTLAFEILKEM 797


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 130/253 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS + D  +  G+ PN   Y  LI+GFC  G+++ A  L   M + G   N + +NT+I+
Sbjct: 267 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 326

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+   V+++L +   M   GI   V TYNTL  GL   ++++ A  L   M    V  
Sbjct: 327 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y T I   C  G +VEA  LFR +     E  +  Y+ ++DG  K G +  A    
Sbjct: 387 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 446

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + + GL+P++ +Y  ++HG C +G++D A  LF +M+ +G  PN V +  L+ G  + 
Sbjct: 447 KEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE 506

Query: 244 NETSKVVELLHRM 256
             + +  +L   M
Sbjct: 507 GRSEEAFQLYDNM 519



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 126/258 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D  + +L +M   G+ P    Y+ L+DG     +I +   +F  M       +V  Y+++
Sbjct: 195 DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSV 254

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN YC+  +V  +  ++ E +  GI P   TY  L +G  +I Q+E A  L  +MQ   V
Sbjct: 255 INAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGV 314

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 +NT IDG C+   + +A E+   +  +  EL +  Y+ L  GL +  +++ A  
Sbjct: 315 GINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKN 374

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G+ PN V+Y  +I   CN+G M +A  LF +M   G  P+ VT+N +M G I
Sbjct: 375 LLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYI 434

Query: 242 RNNETSKVVELLHRMDER 259
           +     +       M+++
Sbjct: 435 KKGSIREAERFKKEMEKK 452



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 1/249 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L+  M  RGV  N  V++T+IDG+C    +D+A E+ + M+  G   +V TYNT
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G  +   ++E+ NL   M+ KG+RP  V+Y TL         +  A +LF EM  + 
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  +DG  K G I EA    + +        I +Y+ L+ G C  GK++ A 
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G  PN+V Y  +I G   +G+ ++A  L+ +M   G+ P+   ++ L +G 
Sbjct: 479 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL-VGS 537

Query: 241 IRNNETSKV 249
           +  ++   V
Sbjct: 538 LHTDKKQNV 546



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 2/235 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LLD M + GV+ NA  Y++L+D +    + DR  E+   M+  G    V TY  L++
Sbjct: 162 ARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G    +D+ +   ++ EM SK +   V  Y+++ +       V  A ++FDE   + +  
Sbjct: 222 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 281

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRT-LRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              TY   I+G CK G + EAAE+  T ++V    +    ++ +IDG C+   ++ A E+
Sbjct: 282 NEHTYGALINGFCKIGQM-EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI 340

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              + ++G+  +V TYN +  G     +MD+A +L   M  KGV PN V++ TL+
Sbjct: 341 KMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLI 395



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 35/229 (15%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           S ++DG+C +G +  AR+L   M  +G   N + YN+L++ Y + KD +    +   M +
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           +GI PTV TY  L                                   +DGL     I +
Sbjct: 207 EGIEPTVGTYTIL-----------------------------------VDGLSAARDITK 231

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
              +F  ++       +  YS +I+  C+ G +  A E+F      G+ PN  TY  +I+
Sbjct: 232 VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALIN 291

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           GFC  GQM+ A  L  DM+ +GV  N + FNT++ G  R N   K +E+
Sbjct: 292 GFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI 340



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 49/97 (50%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           S ++DG CK G++  A +L   +PR G+  N + YN ++  +  +   D+  ++   ME 
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +G+ P   T+  L+ G     + +KV  +   M  +N
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 243


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A   L  M + G++   + YS+LI G C  G++  A+ LF  M  NG   NVV Y +
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYCK  ++  +  LY EM  KGI P   T+  L  GL   +++  A KLF EM   +
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  I+G CK G  V A EL   +           Y  LI GLC  G++  A 
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 181 ELF-------QSLPRV-GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           E         Q L  + G +PNVVTY  +I+G C  G MDKA  L  +M A    PN  T
Sbjct: 586 EFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNT 645

Query: 233 FNTLMLGCIRNNETSKVVEL 252
           +   +          K ++L
Sbjct: 646 YACFLDYLTSEGNIEKAIQL 665



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 135/254 (53%), Gaps = 10/254 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--------DINGCMHN 54
            A  LLD M+++G+ P+ + Y  LI G C TG +  ARE    +        +I GC+ N
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPN 607

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           VVTY  LING CK   ++++  L  EML+    P   TY      L     +E A++L D
Sbjct: 608 VVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD 667

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            +      A T TYN  I G CK G I EAAE+   +          +YS +I   C+ G
Sbjct: 668 VLLEG-FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRG 726

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            L+ A +L++S+   G+ P+ V YN +I+G C  G++ KA +L  DM  +GV PN  T+N
Sbjct: 727 DLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYN 786

Query: 235 TLMLG-CIRNNETS 247
           +L+ G C+ ++ +S
Sbjct: 787 SLIHGTCLMSSVSS 800



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 127/247 (51%), Gaps = 8/247 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + M  +G+ PN   YS LID FC  G++D A      M   G    V  Y++
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   +  + +L+ EM++ G++P VV Y +L  G  +  ++ +A +L+ EM    
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  T T+   I GLC    + EA +LF  +           Y+ LI+G CK G    A+
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM--------EAKGVAPNCVT 232
           EL   +   GL+P+  TY  +I G C+ G++ +A +   D+        E +G  PN VT
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVT 610

Query: 233 FNTLMLG 239
           +  L+ G
Sbjct: 611 YTALING 617



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 146/327 (44%), Gaps = 70/327 (21%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L D ++  G+RP+ +VY+ ++   C   +  RARE+   M+ +GC  +V TYN  I 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM------- 116
           G CK + V E++ + + +  KG+R  V TY TL  GL ++ + E   ++ +EM       
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 117 ----------------------------QHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                                       +   VA     YN  I+ +CK+G + EA  LF
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 149 R------------TLRVL-------------------KCELGIEA----YSCLIDGLCKI 173
                        T  +L                     E+GI+A    YS LI G CK+
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GKL  A  LF  +   GL PNVV Y  +I G+C +G++  A  L+ +M  KG++PN  TF
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
             L+ G    N  ++  +L   M E N
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWN 525



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 128/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +    +++ MI+ G  P+    S L+DG    G I  A +L   +   G   ++  YN 
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN  CK   ++E+ +L++ M  KG+ P  VTY+ L     +  +++ AL    +M    
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A    Y++ I G CK G +  A  LF  +     +  +  Y+ LI G CK G+L  A+
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +   G+ PN  T+  +I G C+  +M +A+ LF +M    V PN VT+N L+ G 
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 241 IRNNETSKVVELLHRMDER 259
            +   T +  ELL  M E+
Sbjct: 541 CKEGNTVRAFELLDEMVEK 559



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 136/268 (50%), Gaps = 11/268 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA++L   M++  V PN   Y+ LI+G C  G   RA EL   M   G + +  TY  
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRP 570

Query: 61  LINGYCKTKDVEESLNLYSEMLSK--------GIRPTVVTYNTLFHGLFEIHQVEHALKL 112
           LI+G C T  V E+    +++  +        G  P VVTY  L +GL +I  ++ A  L
Sbjct: 571 LISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELL 630

Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLC 171
             EM  S+     +TY  F+D L   G I +A +L   L  L+  L     Y+ LI G C
Sbjct: 631 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL--LEGFLANTVTYNILIRGFC 688

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K+G+++ A E+  ++   G+ P+ ++Y+ +I+ +C  G + +A  L+  M  +GV P+ V
Sbjct: 689 KLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 748

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDER 259
            +N L+ GC    E +K  EL   M  R
Sbjct: 749 AYNFLIYGCCVTGELTKAFELRDDMMRR 776



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 35/244 (14%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G +  + T + ++NG  + +    +L+L+ E++S G+RP V  Y  +   L E+     A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL-----FRTLR------------ 152
            ++   M+ S      +TYN FI GLCKN  + EA E+     ++ LR            
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294

Query: 153 ---VLKCELGIE---------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
              V + E G E               A S L+DGL K G + +A++L   + + G+ P+
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +  YN +I+  C DG++D+A  LF +M  KG+ PN VT++ L+    +  +    +  L 
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414

Query: 255 RMDE 258
           +M E
Sbjct: 415 KMTE 418



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 1/148 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +L D++++ G   N   Y+ LI GFC  G I  A E+ V+M  +G   + ++Y+T
Sbjct: 659 IEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 717

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I  YC+  D++E++ L+  ML++G+ P  V YN L +G     ++  A +L D+M    
Sbjct: 718 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 777

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF 148
           V    +TYN+ I G C    +   A+ F
Sbjct: 778 VKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 45/79 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +L + M+ RGV P+   Y+ LI G C+TGE+ +A EL   M   G   N  TYN+
Sbjct: 728 LKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNS 787

Query: 61  LINGYCKTKDVEESLNLYS 79
           LI+G C    V  + + +S
Sbjct: 788 LIHGTCLMSSVSSTADYFS 806


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 132/255 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DE    L   +   + PN   Y+ LID  C    +D A ++ + M+      NVVT++++
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING+ K   ++++      M  +GI P VVTY TL  G F+    + AL+++ +M    V
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                  ++ ++GL +NG I EA  LF+        L    Y+ LIDGL K G + TA++
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             Q L    ++P+ V YN+ I+  C  G+  +A     +M   G+ P+  T+NT+++   
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 242 RNNETSKVVELLHRM 256
           R  ET+K ++LLH M
Sbjct: 601 RKGETAKALKLLHEM 615



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 122/252 (48%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D M  +G+  +   Y+TL+ GFC  G++D AR +   M   G   NV TY   I  YC+T
Sbjct: 193 DRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K VEE+ +LY  M+  G+   VVT + L  GL    +   A  LF EM     A    TY
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY 312

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            T ID L K G   E   L   +      + +  Y+ L+D L K GK +   +  +    
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             L PN VTY ++I   C    +D+A  + L+ME K ++PN VTF++++ G ++     K
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 249 VVELLHRMDERN 260
             E    M ER 
Sbjct: 433 ATEYKRMMKERG 444



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++L  M ++ + PN   +S++I+GF   G +D+A E    M   G   NVVTY T
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K +  + +L +Y +ML +G++      ++L +GL +  ++E A+ LF +   S 
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   Y T IDGL K G +  A +  + L           Y+  I+ LC +GK + A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +  +GL P+  TYN MI   C  G+  KA  L  +M+   + PN +T+NTL+ G 
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 241 IRNNETSKVVELLHRM 256
                  K   LL+ M
Sbjct: 635 FGTGAVEKAKYLLNEM 650



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +LD+M + GV PN   Y+  I  +C T  ++ A +L+  M  NG + +VVT + 
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+     E+  L+ EM   G  P  VTY TL   L +  + +  L L  EM    
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   +D L K G   E  +  R             Y+ LID LCK   ++ A 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +    + PNVVT++ +I+GF   G +DKA +    M+ +G+ PN VT+ TL+ G 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 241 IRNNETSKVVELLHRM 256
            +       +E+ H M
Sbjct: 460 FKFQGQDAALEVYHDM 475



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 122/252 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+    +M +RG+ PN   Y TLIDGF      D A E++  M   G   N    ++
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  +   +EE++ L+ +    G+    V Y TL  GLF+   +  A K   E+   +
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN FI+ LC  G   EA      +R +  +     Y+ +I   C+ G+   A 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +    + PN++TYN ++ G    G ++KA  L  +M + G +P+ +T   ++  C
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 241 IRNNETSKVVEL 252
            ++     ++++
Sbjct: 670 SQSRRLDVILDI 681



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA----------------------- 39
           +A +LL  M    ++PN   Y+TL+ G   TG +++A                       
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666

Query: 40  ------RELFVSMDINGCMHN------VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                 R L V +DI+  M N      +  YNTL+   C      ++  +  EML  GI 
Sbjct: 667 QACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P  +T+N L  G  +   +++A   + +M H +++   +T+NT + GL   G I EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              +     E     Y  L  G  K      A  L+  +   G +P V TYN +I  F  
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G M +A +LF DM+ +GV P   T++ L+ G  R    ++V + L  M E+ 
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 21/244 (8%)

Query: 5   SRLLDL-------MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           SR LD+       M+  G+  +  VY+TL+   C  G   +A  +   M  +G   + +T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N LI G+CK+  ++ +   Y++ML + I P + T+NTL  GL  + ++  A  +  EM+
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-------GIEAYSCLIDGL 170
            S +     TY+    G  K    VEA  L+       CE+        +  Y+ LI   
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLY-------CEMVGKGFVPKVSTYNALISDF 844

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K G +  A ELF+ + + G+ P   TY+I++ G+       +      DM+ KG +P+ 
Sbjct: 845 TKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSK 904

Query: 231 VTFN 234
            T +
Sbjct: 905 GTLS 908



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 39/293 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  +   M+  GV+ N F+  +L++G    G+I+ A  LF     +G   + V Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K  D+  +     E++ + + P  V YN   + L  + + + A     EM++  +
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             + STYNT I   C+ G   +A +L   +++   +  +  Y+ L+ GL   G +E A  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 182 LFQSLPRVGLMPNVVT-----------------------------------YNIMIHGFC 206
           L   +   G  P+ +T                                   YN ++   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR----NNETSKVVELLHR 255
             G   KA  +  +M   G+AP+ +TFN L+LG  +    +N  +   ++LH+
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 42/237 (17%)

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
            + N L+  +C+ + +  ++ L      +  RPT V YN L   L + H   HA  +  E
Sbjct: 74  ASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSD-HA--HAPAVLAE 125

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIV--------------------------------- 142
           M    V  +  T NT + GLC+NG +                                  
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFGDT 185

Query: 143 -EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
             A  +   +      + +  Y+ L+ G C+ G+++ A  +   +   G+ PNV TY   
Sbjct: 186 PAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPF 245

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           I  +C    +++A DL+  M   GV  + VT + L+ G  R+   S+   L   MD+
Sbjct: 246 IVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 61/151 (40%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L  M + G+ PN   Y  L  G         A  L+  M   G +  V TYN 
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + K   + ++  L+ +M  +G+ PT  TY+ L  G   I       K   +M+   
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
            +    T +       K G   +A  L + L
Sbjct: 900 FSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 132/255 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DE    L   +   + PN   Y+ LID  C    +D A ++ + M+      NVVT++++
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING+ K   ++++      M  +GI P VVTY TL  G F+    + AL+++ +M    V
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                  ++ ++GL +NG I EA  LF+        L    Y+ LIDGL K G + TA++
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             Q L    ++P+ V YN+ I+  C  G+  +A     +M   G+ P+  T+NT+++   
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 242 RNNETSKVVELLHRM 256
           R  ET+K ++LLH M
Sbjct: 601 RKGETAKALKLLHEM 615



 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 124/256 (48%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D M  +G+  +   Y+TL+ GFC  G++D AR +   M   G   NV TY   I 
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            YC+TK VEE+ +LY  M+  G+   VVT + L  GL    +   A  LF EM     A 
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY T ID L K G   E   L   +      + +  Y+ L+D L K GK +   +  
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +      L PN VTY ++I   C    +D+A  + L+ME K ++PN VTF++++ G ++ 
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427

Query: 244 NETSKVVELLHRMDER 259
               K  E    M ER
Sbjct: 428 GLLDKATEYKRMMKER 443



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++L  M ++ + PN   +S++I+GF   G +D+A E    M   G   NVVTY T
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K +  + +L +Y +ML +G++      ++L +GL +  ++E A+ LF +   S 
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   Y T IDGL K G +  A +  + L           Y+  I+ LC +GK + A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +  +GL P+  TYN MI   C  G+  KA  L  +M+   + PN +T+NTL+ G 
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 241 IRNNETSKVVELLHRM 256
                  K   LL+ M
Sbjct: 635 FGTGAVEKAKYLLNEM 650



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +LD+M + GV PN   Y+  I  +C T  ++ A +L+  M  NG + +VVT + 
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+     E+  L+ EM   G  P  VTY TL   L +  + +  L L  EM    
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   +D L K G   E  +  R             Y+ LID LCK   ++ A 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +    + PNVVT++ +I+GF   G +DKA +    M+ +G+ PN VT+ TL+ G 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 241 IRNNETSKVVELLHRM 256
            +       +E+ H M
Sbjct: 460 FKFQGQDAALEVYHDM 475



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 5/253 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH--NVVTYNTL 61
           A  +L  M +RGV  +    +TL+ G C  G++D A  L    D  G +H  +V+ +NTL
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL---ADRGGGIHALDVIGWNTL 175

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I GYC+  D   +L++   M ++G+   VV YNTL  G     QV+ A  + D M+ + V
Sbjct: 176 IAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY  FI   C+   + EA +L+  +      L +   S L+ GLC+ G+   A+ 
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+ + +VG  PN VTY  +I      G+  +   L  +M ++GV  + VT+  LM    
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 242 RNNETSKVVELLH 254
           +  +T +V + L 
Sbjct: 356 KQGKTDEVKDTLR 368



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 122/252 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+    +M +RG+ PN   Y TLIDGF      D A E++  M   G   N    ++
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  +   +EE++ L+ +    G+    V Y TL  GLF+   +  A K   E+   +
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN FI+ LC  G   EA      +R +  +     Y+ +I   C+ G+   A 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +    + PN++TYN ++ G    G ++KA  L  +M + G +P+ +T   ++  C
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 241 IRNNETSKVVEL 252
            ++     ++++
Sbjct: 670 SQSRRLDVILDI 681



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 35/292 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA   L  M   G++P+   Y+T+I   C  GE  +A +L   M ++    N++TYNTL+
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVT------------------------------ 92
            G   T  VE++  L +EM+S G  P+ +T                              
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLH 691

Query: 93  -----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
                YNTL   L        A  + +EM  S +A +T T+N  I G CK+ ++  A   
Sbjct: 692 ADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFAT 751

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           +  +        I  ++ L+ GL  +G++  A  +   + + GL PN +TY+I+  G   
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGK 811

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
                +A  L+ +M  KG  P   T+N L+    +    ++  EL   M +R
Sbjct: 812 QSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKR 863



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 118/272 (43%), Gaps = 35/272 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA----------------------- 39
           +A +LL  M    ++PN   Y+TL+ G   TG +++A                       
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666

Query: 40  ------RELFVSMDINGCMHN------VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                 R L V +DI+  M N      +  YNTL+   C      ++  +  EML  GI 
Sbjct: 667 QACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P  +T+N L  G  +   +++A   + +M H +++   +T+NT + GL   G I EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              +     E     Y  L  G  K      A  L+  +   G +P V TYN +I  F  
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            G M +A +LF DM+ +GV P   T++ L+ G
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 39/293 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  +   M+  GV+ N F+  +L++G    G+I+ A  LF     +G   + V Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K  D+  +     E++ + + P  V YN   + L  + + + A     EM++  +
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             + STYNT I   C+ G   +A +L   +++   +  +  Y+ L+ GL   G +E A  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 182 LFQSLPRVGLMPNVVT-----------------------------------YNIMIHGFC 206
           L   +   G  P+ +T                                   YN ++   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR----NNETSKVVELLHR 255
             G   KA  +  +M   G+AP+ +TFN L+LG  +    +N  +   ++LH+
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 8/257 (3%)

Query: 6   RLLDLMIQ--RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           RLL   I   R  RP    Y+ L+       +   A  +   M   G   + VT NTL+ 
Sbjct: 87  RLLRPAIALLRSSRPTTVAYNILLAALS---DHAHAPAVLAEMCKRGVPFDGVTVNTLLA 143

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRP-TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           G C+   V+ +  L       GI    V+ +NTL  G   +     AL + D M    + 
Sbjct: 144 GLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLP 201

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YNT + G C+ G +  A  +   ++    +  +  Y+  I   C+   +E A++L
Sbjct: 202 MDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDL 261

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           ++ + R G++ +VVT + ++ G C DG+  +A+ LF +M+  G APN VT+ TL+    +
Sbjct: 262 YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAK 321

Query: 243 NNETSKVVELLHRMDER 259
                +++ LL  M  R
Sbjct: 322 AGRGKELLSLLGEMVSR 338



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 21/229 (9%)

Query: 5   SRLLDL-------MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           SR LD+       M+  G+  +  VY+TL+   C  G   +A  +   M  +G   + +T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N LI G+CK+  ++ +   Y++ML + I P + T+NTL  GL  + ++  A  +  EM+
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-------GIEAYSCLIDGL 170
            S +     TY+    G  K    VEA  L+       CE+        +  Y+ LI   
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLY-------CEMVGKGFVPKVSTYNALISDF 844

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
            K G +  A ELF+ + + G+ P   TY+I++ G+ +  +  K+ + + 
Sbjct: 845 TKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYF 893



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L  M + G+ PN   Y  L  G         A  L+  M   G +  V TYN 
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           LI+ + K   + ++  L+ +M  +G+ PT  TY+ L  G +++ + + +
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKS 888



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA RL   M+ +G  P    Y+ LI  F   G + +A+ELF  M   G      TY+ L+
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876

Query: 63  NGYCKTKDVEESLNLY 78
           +G+      ++S N Y
Sbjct: 877 SGWYDLAREQKSQNTY 892


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 144/289 (49%), Gaps = 35/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+   M+   ++P+ + Y+TL+DG+C  G++ +A  L   M  +G    VVTYNT+I
Sbjct: 385 EAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVI 444

Query: 63  NG-----------------------------------YCKTKDVEESLNLYSEMLSKGIR 87
            G                                   + K  D + ++ L+ E+L +G  
Sbjct: 445 KGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFT 504

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
            + V +NT+  GL ++ ++  A  +FD M+   ++ +  TY T  DG CKNG + EA ++
Sbjct: 505 KSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQI 564

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              +        IE Y+ LIDGL KI KL    +L   +   GL PNVVTY  +I G+C+
Sbjct: 565 KGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCD 624

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + ++DKA  L+ +M  +G  PN V  + ++    R++  S+   +L +M
Sbjct: 625 EQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKM 673



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 37/294 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA ++  +M ++ +  +  +Y++LIDG     +++   +L V M   G   NVVTY T
Sbjct: 558 VQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGT 617

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+C  + ++++ +LY EM+ +G  P VV  + +   L+   ++  A  + D+M   D
Sbjct: 618 LISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFD 677

Query: 121 VAA-----------------------------------ETSTYNTFIDGLCKNGYIVEAA 145
           + A                                       YN  IDGLCK+G + EA 
Sbjct: 678 ILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEAR 737

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
            +   L           Y  LI      G ++ A++L   +   GL+PN+  YN +I+G 
Sbjct: 738 SVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGL 797

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI-RNNETSKVVELLHRMDE 258
           C  G +D+A  LF  +  KG+ PN VT+N +++GC  R  +  K   L  +M E
Sbjct: 798 CKLGNIDRAQRLFYKLYQKGLVPNAVTYN-ILIGCYCRIGDLDKASRLREKMTE 850



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 128/257 (49%), Gaps = 1/257 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D ++  G+ P+ ++ S +++  C  G +D A E+   M   G   NVVTYN L+N
Sbjct: 210 AVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVN 269

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VA 122
           GY    D E    +   M  +G+   VVT   L  G  +  +++ A KL  E++  + + 
Sbjct: 270 GYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLV 329

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   Y   +DG C+ G + +A  +   +  +  ++ +   + LI G CK+G++  A  +
Sbjct: 330 VDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERV 389

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +    L P+  +YN ++ G+C +G++ KA  L  +M   G+ P  VT+NT++ G + 
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449

Query: 243 NNETSKVVELLHRMDER 259
                  + L H M ER
Sbjct: 450 VGSYDDALHLWHLMVER 466



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 6/243 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +L+ M++ G+ PN   Y+ L++G+   G+ +    +   M   G   NVVT   
Sbjct: 242 VDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTM 301

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVV---TYNTLFHGLFEIHQVEHALKLFDEMQ 117
           L+ GYCK   ++E+  L  E+    +   VV    Y  L  G  ++ ++E A+++ DEM 
Sbjct: 302 LMRGYCKKGKMDEAEKLLREVEEDEL--LVVDERVYGVLVDGYCQMGRMEDAVRIRDEML 359

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +       NT I G CK G + EA  +F  +     +    +Y+ L+DG C+ GK+ 
Sbjct: 360 RVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVS 419

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A+ L + +   G+ P VVTYN +I G  + G  D A  L+  M  +GV PN ++  T M
Sbjct: 420 KAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCT-M 478

Query: 238 LGC 240
           L C
Sbjct: 479 LDC 481



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 128/258 (49%), Gaps = 12/258 (4%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DE SR+  +    G+R  +F+   L+      GE   A  +F  +   G + +V   + +
Sbjct: 180 DEMSRIGRV---PGLRSCSFLLGKLVQ----KGEGRVAVMVFDQIVGTGIVPDVYMCSIV 232

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +N +C+   V+ ++ +  +M+ +G+ P VVTYN L +G       E   ++   M    V
Sbjct: 233 VNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGV 292

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI---EAYSCLIDGLCKIGKLET 178
           +    T    + G CK G + EA +L R   V + EL +     Y  L+DG C++G++E 
Sbjct: 293 SRNVVTCTMLMRGYCKKGKMDEAEKLLR--EVEEDELLVVDERVYGVLVDGYCQMGRMED 350

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +   + RVGL  N+V  N +I G+C  GQ+ +A  +F+ M    + P+C ++NTL+ 
Sbjct: 351 AVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLD 410

Query: 239 GCIRNNETSKVVELLHRM 256
           G  R  + SK   L   M
Sbjct: 411 GYCREGKVSKAFMLCEEM 428



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L +++ RG  P+ F Y TLI    ++G +D A +L   M   G + N+  YN 
Sbjct: 733 LDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNA 792

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK  +++ +  L+ ++  KG+ P  VTYN L      I  ++ A +L ++M    
Sbjct: 793 LINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEG 852

Query: 121 VAAE 124
           ++  
Sbjct: 853 ISTR 856



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 57/91 (62%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L D M+++G+ PN  +Y+ LI+G C  G IDRA+ LF  +   G + N VTYN 
Sbjct: 768 VDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNI 827

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
           LI  YC+  D++++  L  +M  +GI   ++
Sbjct: 828 LIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/165 (20%), Positives = 78/165 (47%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           ++ L+  + +    + +L ++ EM   G  P + + + L   L +  +   A+ +FD++ 
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            + +  +    +  ++  C+ G +  A E+   +     E  +  Y+ L++G    G  E
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
               + + +   G+  NVVT  +++ G+C  G+MD+A  L  ++E
Sbjct: 279 GVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVE 323



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 65/135 (48%)

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
           +  ++  +    + G    A  +F  +  +    G+ + S L+  L + G+   A  +F 
Sbjct: 156 SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFD 215

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +   G++P+V   +I+++  C  G++D A ++   M  +G+ PN VT+N L+ G +   
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275

Query: 245 ETSKVVELLHRMDER 259
           +   V  +L  M ER
Sbjct: 276 DFEGVERVLRLMSER 290


>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 376

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  Y  L+ GFC  G  +++  +       G   +   Y+ 
Sbjct: 75  VDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G CK   +++++++ + M+  G +P    YN L +GL    + E A+++F E+    
Sbjct: 135 MISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCK     EA +L + +        +  YS LI GLC+  K+E A 
Sbjct: 195 CSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+ + A +L+ DM     APN VT+NTLM G 
Sbjct: 255 QLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            +  +T   + +  R+
Sbjct: 315 YKGGDTRNALVIWARI 330



 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 125/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L+ MI+ G +PN  VY+ LI+G     + + A  +F  +    C   +VTYNT
Sbjct: 145 LDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ +L  EML KG  P+V+TY+ L  GL + H+VE AL+L++++    
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G    A+EL+  +    C   +  Y+ L++G  K G    A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL+P++++YNI + G C   ++  A     D   K + P  +T
Sbjct: 325 VIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKNIVPTVIT 376



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 131/259 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +++  +L++  Q G   +AF YS +I G C  G++D+A  +   M  +GC  N   YN L
Sbjct: 111 NKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNAL 170

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING       E+++ ++ E+ ++   PT+VTYNTL +GL +  +   A  L  EM     
Sbjct: 171 INGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGW 230

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY+  I GLC++  +  A +L+  +     +  ++ ++ LI GLC +GK E A E
Sbjct: 231 NPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASE 290

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L+  +      PN+VTYN ++ GF   G    A  ++  +   G+ P+ +++N  + G  
Sbjct: 291 LYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLC 350

Query: 242 RNNETSKVVELLHRMDERN 260
             N  S  +  L+    +N
Sbjct: 351 ACNRISVAILFLNDAVTKN 369



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G I+ A  ++  M  +    + V YN ++NG+ K   ++   +L+  M  +G R  V
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSR-NV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++NT+  GLF   +V+    +++ M+ S    +++TY   + G CKNGY  ++  +   
Sbjct: 60  ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
            +     L   AYS +I GLCK+GKL+ A  +   +   G  PN   YN +I+G     +
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + A  +F ++  +  +P  VT+NTL+ G  +    ++  +L+  M E+
Sbjct: 180 FEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEK 228


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 134/259 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  LL  M  +G+ PN   ++ L+ G C  G +  A  +   M  N  + +  TYN 
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNV 307

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+CK   + E++ L  EM +  + P VVTYNTL +G FE    E   KL +EM+   
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRG 367

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   + TYN  +    K G + E  +  R +    C   I  Y+ LI   CK+GK++ A+
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAF 427

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + R GL  + VT N M+   C + ++D+AHDL      +G   + V++ TL++G 
Sbjct: 428 RLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGY 487

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ + S+ + L   M E+
Sbjct: 488 FKHEKASQALRLWDEMKEK 506



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 135/253 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E  +L++ M  RG++PN+  Y+ ++  F   G++D   +    M+ +GC+ ++VTYNTL
Sbjct: 354 EEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTL 413

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK   ++E+  L  EM  KG++   VT NT+   L    +++ A  L    +    
Sbjct: 414 ISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGY 473

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +Y T I G  K+    +A  L+  ++  +    I  Y+ +I GLC++GK   A +
Sbjct: 474 FVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAID 533

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
               L   GL+P+ +TYN +IHG+C +GQ++KA      M  K   P+ VT NTL+ G  
Sbjct: 534 KLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLC 593

Query: 242 RNNETSKVVELLH 254
           +     K ++L +
Sbjct: 594 KEGMLEKALKLFN 606



 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 136/259 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA RL+D M ++G++ +    +T++   C   ++D A +L  S    G   + V+Y T
Sbjct: 423 MDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGT 482

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY K +   ++L L+ EM  K I P+++TYN++  GL ++ +   A+   DE+  S 
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT I G C+ G + +A +    +     +  +   + L+ GLCK G LE A 
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKAL 602

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF +    G   + V+YN +I   C + +  +A DL  +ME K + P+C T+N ++ G 
Sbjct: 603 KLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGL 662

Query: 241 IRNNETSKVVELLHRMDER 259
                     E + ++ E+
Sbjct: 663 TDAGRMKDAEEFISKIAEK 681



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 116/226 (51%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I+ GV+ N   ++ LI G C+      A  +   M   GC  + +TYNT+++G CK   +
Sbjct: 189 IKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRL 248

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
            E+ +L  +M +KG+ P   T+N L  G   +  ++ A  + + M  + V  +  TYN  
Sbjct: 249 NEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVM 308

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I G CK G I EA  L   +  LK    +  Y+ LI+G  + G  E  ++L + +   G+
Sbjct: 309 ISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGM 368

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            PN VTYN+M+  F   G+MD+       ME  G  P+ VT+NTL+
Sbjct: 369 KPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLI 414



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 35/295 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ +++LM Q  V P+A+ Y+ +I GFC  G I  A  L   M+      +VVTYNT
Sbjct: 283 LKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNT 342

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPT------------------------------- 89
           LING  +    EE   L  EM  +G++P                                
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402

Query: 90  ----VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
               +VTYNTL     ++ +++ A +L DEM    +  +  T NT +  LC+   + EA 
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAH 462

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L  + R     +   +Y  LI G  K  K   A  L+  +    ++P+++TYN MI G 
Sbjct: 463 DLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGL 522

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C  G+ ++A D   ++   G+ P+ +T+NT++ G  +  +  K  +  ++M E+N
Sbjct: 523 CQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN 577



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 129/251 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R+L  M   G  P+   Y+T++DG C  G ++ AR+L + M   G   N  T+N L+
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILV 274

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C+   ++E+ N+   M    + P   TYN +  G  +  ++  A++L +EM++  ++
Sbjct: 275 VGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLS 334

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT I+G  ++G   E  +L   +     +     Y+ ++    K GK++   + 
Sbjct: 335 PDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKT 394

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G +P++VTYN +I   C  G+MD+A  L  +M  KG+  + VT NT++    R
Sbjct: 395 VRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCR 454

Query: 243 NNETSKVVELL 253
             +  +  +LL
Sbjct: 455 ERKLDEAHDLL 465



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 23/231 (9%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A RL D M ++ + P+   Y+++I G C  G+ ++A +    +  +G + + +TYNT+I
Sbjct: 495 QALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTII 554

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC+   VE++   +++M+ K  +P VVT NTL  GL +   +E ALKLF+        
Sbjct: 555 HGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKD 614

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YNT I  LCK     EA +L   +   K       Y+ ++ GL   G+++ A E 
Sbjct: 615 VDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEF 674

Query: 183 FQSLPRVGLM-----------------------PNVVTYNIMIHGFCNDGQ 210
              +   G                         PN + Y+  I+  C+ G+
Sbjct: 675 ISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGR 725



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 38/236 (16%)

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI---HQVEHALKLFDEMQH 118
           I  Y       ++  +++ M   G++PT++T NTL + L      H +  +  +F +   
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             V   T+++N  I G C      EA  +   +R   C      Y+ ++DGLCK G+L  
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 179 AWELFQSLPRVGLMPN-----------------------------------VVTYNIMIH 203
           A +L   +   GL PN                                     TYN+MI 
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           GFC  G++ +A  L  +ME   ++P+ VT+NTL+ GC  +  + +  +L+  M+ R
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGR 366


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 132/255 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DE    L   +   + PN   Y+ LID  C    +D A ++ + M+      NVVT++++
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING+ K   ++++      M  +GI P VVTY TL  G F+    + AL+++ +M    V
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                  ++ ++GL +NG I EA  LF+        L    Y+ LIDGL K G + TA++
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
             Q L    ++P+ V YN+ I+  C  G+  +A     +M   G+ P+  T+NT+++   
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 242 RNNETSKVVELLHRM 256
           R  ET+K ++LLH M
Sbjct: 601 RKGETAKALKLLHEM 615



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 122/252 (48%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D M  +G+  +   Y+TL+ GFC  G++D AR +   M   G   NV TY   I  YC+T
Sbjct: 193 DRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           K VEE+ +LY  M+  G+   VVT + L  GL    +   A  LF EM     A    TY
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY 312

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
            T ID L K G   E   L   +      + +  Y+ L+D L K GK +   +  +    
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
             L PN VTY ++I   C    +D+A  + L+ME K ++PN VTF++++ G ++     K
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 249 VVELLHRMDERN 260
             E    M ER 
Sbjct: 433 ATEYKRMMKERG 444



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 133/256 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++L  M ++ + PN   +S++I+GF   G +D+A E    M   G   NVVTY T
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K +  + +L +Y +ML +G++      ++L +GL +  ++E A+ LF +   S 
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   Y T IDGL K G +  A +  + L           Y+  I+ LC +GK + A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +  +GL P+  TYN MI   C  G+  KA  L  +M+   + PN +T+NTL+ G 
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 241 IRNNETSKVVELLHRM 256
                  K   LL+ M
Sbjct: 635 FGTGAVEKAKYLLNEM 650



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 125/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +LD+M + GV PN   Y+  I  +C T  ++ A +L+  M  NG + +VVT + 
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C+     E+  L+ EM   G  P  VTY TL   L +  + +  L L  EM    
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  TY   +D L K G   E  +  R             Y+ LID LCK   ++ A 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++   +    + PNVVT++ +I+GF   G +DKA +    M+ +G+ PN VT+ TL+ G 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 241 IRNNETSKVVELLHRM 256
            +       +E+ H M
Sbjct: 460 FKFQGQDAALEVYHDM 475



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 5/253 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH--NVVTYNTL 61
           A  +L  M +RGV  +    +TL+ G C  G++D A  L    D  G +H  +V+ +NTL
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL---ADRGGGIHALDVIGWNTL 175

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I GYC+  D   +L++   M ++G+   VV YNTL  G     QV+ A  + D M+ + V
Sbjct: 176 IAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
               +TY  FI   C+   + EA +L+  +      L +   S L+ GLC+ G+   A+ 
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+ + +VG  PN VTY  +I      G+  +   L  +M ++GV  + VT+  LM    
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 242 RNNETSKVVELLH 254
           +  +T +V + L 
Sbjct: 356 KQGKTDEVKDTLR 368



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 122/252 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+    +M +RG+ PN   Y TLIDGF      D A E++  M   G   N    ++
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  +   +EE++ L+ +    G+    V Y TL  GLF+   +  A K   E+   +
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN FI+ LC  G   EA      +R +  +     Y+ +I   C+ G+   A 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   +    + PN++TYN ++ G    G ++KA  L  +M + G +P+ +T   ++  C
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 241 IRNNETSKVVEL 252
            ++     ++++
Sbjct: 670 SQSRRLDVILDI 681



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA----------------------- 39
           +A +LL  M    ++PN   Y+TL+ G   TG +++A                       
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666

Query: 40  ------RELFVSMDINGCMHN------VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                 R L V +DI+  M N      +  YNTL+   C      ++  +  EML  GI 
Sbjct: 667 QACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P  +T+N L  G  +   +++A   + +M H +++   +T+NT + GL   G I EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              +     E     Y  L  G  K      A  L+  +   G +P V TYN +I  F  
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G M +A +LF DM+ +GV P   T++ L+ G  R    ++V + L  M E+ 
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 21/244 (8%)

Query: 5   SRLLDL-------MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVT 57
           SR LD+       M+  G+  +  VY+TL+   C  G   +A  +   M  +G   + +T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N LI G+CK+  ++ +   Y++ML + I P + T+NTL  GL  + ++  A  +  EM+
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL-------GIEAYSCLIDGL 170
            S +     TY+    G  K    VEA  L+       CE+        +  Y+ LI   
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLY-------CEMVGKGFVPKVSTYNALISDF 844

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K G +  A ELF+ + + G+ P   TY+I++ G+       +      DM+ KG +P+ 
Sbjct: 845 TKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSK 904

Query: 231 VTFN 234
            T +
Sbjct: 905 GTLS 908



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 8/258 (3%)

Query: 6   RLLDLMIQ--RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           RLL   I   R  RP    Y+ L+       +   A  +   M   G   + VT NTL+ 
Sbjct: 87  RLLRPAIALLRSSRPTTVAYNILLAALS---DHAHAPAVLAEMCKRGVPFDGVTVNTLLA 143

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRP-TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           G C+   V+ +  L       GI    V+ +NTL  G   +     AL + D M    + 
Sbjct: 144 GLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLP 201

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YNT + G C+ G +  A  +   ++    +  +  Y+  I   C+   +E A++L
Sbjct: 202 MDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDL 261

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           ++ + R G++ +VVT + ++ G C DG+  +A+ LF +M+  G APN VT+ TL+    +
Sbjct: 262 YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAK 321

Query: 243 NNETSKVVELLHRMDERN 260
                +++ LL  M  R 
Sbjct: 322 AGRGKELLSLLGEMVSRG 339



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 39/293 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  +   M+  GV+ N F+  +L++G    G+I+ A  LF     +G   + V Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K  D+  +     E++ + + P  V YN   + L  + + + A     EM++  +
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             + STYNT I   C+ G   +A +L   +++   +  +  Y+ L+ GL   G +E A  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 182 LFQSLPRVGLMPNVVT-----------------------------------YNIMIHGFC 206
           L   +   G  P+ +T                                   YN ++   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR----NNETSKVVELLHR 255
             G   KA  +  +M   G+AP+ +TFN L+LG  +    +N  +   ++LH+
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 61/151 (40%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  +L  M + G+ PN   Y  L  G         A  L+  M   G +  V TYN 
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + K   + ++  L+ +M  +G+ PT  TY+ L  G   I       K   +M+   
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
            +    T +       K G   +A  L + L
Sbjct: 900 FSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930


>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 376

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  + +LM + G   ++  Y  L+ GFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK   +E+++++ + M+  G +P    YN L  GL    + + A+++F EM  +D
Sbjct: 135 MINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTD 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                +TY+  IDGLCK     EA +L + +        +  YS L+ GLC   K+E A 
Sbjct: 195 CPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + + G  P+V  +NI+IHG C+ G+   A  L+LDM     APN VT NTLM G 
Sbjct: 255 QLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++      + +  R+
Sbjct: 315 YKDGNVRNALVIWARI 330



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 120/232 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +L+ MI+ G +PN  VY+ LI G     + D A  +F  M    C  N+ TY+ 
Sbjct: 145 LEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSI 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK +   E+ +L  EML KG+ P+V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G    A  L+  +    C   +   + L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + +  L P++++YNI + G C+  ++  A     D   K + P  +T
Sbjct: 325 VIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKIIPTKIT 376



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NG+ +   +++   L+  M  +G R +V
Sbjct: 1   CESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREGSR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +VE A+ +++ M  S    ++ TY   + G CKNGYI ++  +   
Sbjct: 60  ASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEI 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+ LCK  KLE A  +   + R G  PN   YN +I G     +
Sbjct: 120 AEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            D A  +F +M      PN  T++ L+ G  +     +  +L+  M E+
Sbjct: 180 RDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEK 228


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 132/249 (53%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L + +  RG  P+   YS LI G    G      ELF +M   GC+ +   YNT I+G+C
Sbjct: 569 LFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFC 628

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K+  V ++  L  EM +KG +PTVVTY ++  GL +I +++ A  LF+E + + +     
Sbjct: 629 KSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVV 688

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y++ IDG  K G I EA  +   L        +  ++CL+D L K  ++  A   FQ++
Sbjct: 689 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNM 748

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             +   PN +TY+I+I+G C   + +KA   + +M+ +G+ PN +T+ T++ G  +    
Sbjct: 749 KNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNI 808

Query: 247 SKVVELLHR 255
           ++   L  R
Sbjct: 809 AEASSLFER 817



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RL + M+     PNA VY++LI  F   G  +   ++F  M   GC  ++   N 
Sbjct: 493 VDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNA 552

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  +  +   L+ E+ S+G  P V++Y+ L HGL +        +LF  M+   
Sbjct: 553 YMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG 612

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T  YNTFIDG CK+G + +A +L   ++    +  +  Y  +IDGL KI +L+ A+
Sbjct: 613 CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAY 672

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     GL  NVV Y+ +I GF   G++D+A+ +  ++  KG+ PN  T+N L+   
Sbjct: 673 MLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 732

Query: 241 IRNNETSKVVELLHRM 256
           ++  E ++ +     M
Sbjct: 733 VKAEEINEALVCFQNM 748



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 124/237 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   L   M ++G   +   Y+T IDGFC +G++++A +L   M   G    VVTY ++I
Sbjct: 600 ETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVI 659

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  S G+   VV Y++L  G  ++ +++ A  + +E+    + 
Sbjct: 660 DGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 719

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +D L K   I EA   F+ ++ LK       YS LI+GLC++ K   A+  
Sbjct: 720 PNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVF 779

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +Q + + GL PN +TY  MI G    G + +A  LF   +A G  P+  ++N ++ G
Sbjct: 780 WQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEG 836



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 120/239 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + + M  +   P+   + +LIDG    G +D A  L+  M  +  + N V Y +
Sbjct: 458 LDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTS 517

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  + K    E+   ++ EM+ +G  P +   N     +F+  +      LF+E++   
Sbjct: 518 LIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRG 577

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y+  I GL K G+  E  ELF  ++   C L   AY+  IDG CK GK+  A+
Sbjct: 578 FIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAY 637

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +   G  P VVTY  +I G     ++D+A+ LF + ++ G+  N V +++L+ G
Sbjct: 638 QLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDG 696



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  + + M Q    P A+ Y+T+I G+   G+ D A  L       GC+ +V+ YN 
Sbjct: 319 LDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++    K   + E+L  + EM  K   P + TYN L   L +  +VE A K+ D M+ + 
Sbjct: 379 ILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAG 437

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T N  ID LCK   + EA  +F  +    C      +  LIDGL K G+++ A+
Sbjct: 438 LFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAY 497

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +     +PN V Y  +I  F   G+ +  H +F +M  +G +P+    N  M   
Sbjct: 498 RLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCV 557

Query: 241 IRNNETSKVVELLHRMDER 259
            +  ET K   L   +  R
Sbjct: 558 FKAGETGKGRALFEEIKSR 576



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 131/259 (50%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA R  + M ++   PN   Y+ LID  C  GE++ A ++  +M   G   NV+T N 
Sbjct: 389 LGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNI 447

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK K ++E+ +++  M  K   P  VT+ +L  GL +  +V+ A +L+++M  SD
Sbjct: 448 MIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSD 507

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y + I    K G   +  ++F+ +    C   +   +  +D + K G+     
Sbjct: 508 KIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGR 567

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G +P+V++Y+I+IHG    G   + ++LF  M+ +G   +   +NT + G 
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGF 627

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ + +K  +LL  M  +
Sbjct: 628 CKSGKVNKAYQLLEEMKTK 646



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M    +  +  +Y+  ID F   G++D A + F  +  +G + + VTY +
Sbjct: 249 LDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTS 308

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK   ++E++ ++ +M      P    YNT+  G     + + A  L +  +   
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  YN  +  L K G + EA   F  ++       +  Y+ LID LCK G++E A+
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAF 427

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++  ++   GL PNV+T NIMI   C   ++D+A  +F  M  K  +P+ VTF +L+ G 
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487

Query: 241 IRNNETSKVVELLHRM 256
            +         L  +M
Sbjct: 488 GKQGRVDDAYRLYEQM 503



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 113/225 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +LL+ M  +G +P    Y ++IDG      +D A  LF     NG   NVV Y++
Sbjct: 633 VNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSS 692

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   ++E+  +  E++ KG+ P V T+N L   L +  ++  AL  F  M++  
Sbjct: 693 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLK 752

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  I+GLC+     +A   ++ ++    +     Y+ +I GL K G +  A 
Sbjct: 753 GTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEAS 812

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            LF+     G +P+  +YN +I G     +  +A+ +F +   KG
Sbjct: 813 SLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKG 857



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 7/261 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E   L+  M +   RP    Y+TLI       E D    LF  M   G   +V  + T
Sbjct: 179 LREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTT 238

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I  + +   ++ +L+L  EM S  +   +V YN       +  +V+ A K F E++   
Sbjct: 239 VIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHG 298

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDGLCKIGKLE 177
           +  +  TY + I  LCK   + EA E+F  +   R + C     AY+ +I G    GK +
Sbjct: 299 LLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAY---AYNTMIMGYGSAGKFD 355

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A+ L +     G +P+V+ YN ++      G++ +A   F +M+ K  APN  T+N L+
Sbjct: 356 EAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLI 414

Query: 238 LGCIRNNETSKVVELLHRMDE 258
               +  E     ++   M E
Sbjct: 415 DMLCKAGEVEAAFKVRDAMKE 435



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 93/225 (41%)

Query: 35  EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
           + D   ++   M I G   +  T   LI    K+  + E  +L   M     RP    Y 
Sbjct: 143 KFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYT 202

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           TL   L  + + +  L LF +MQ          + T I    + G +  A  L   ++  
Sbjct: 203 TLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSN 262

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                I  Y+  ID   K GK++ AW+ F  +   GL+P+ VTY  MI   C   ++D+A
Sbjct: 263 CLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEA 322

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            ++F  ME     P    +NT+++G     +  +   LL R   R
Sbjct: 323 VEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKAR 367



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   YS LI+G C   + ++A   +  M   G   N +TY T+I G  K  ++ E+ +L
Sbjct: 755 PNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSL 814

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +    + G  P   +YN +  GL    +   A K+F+E +       T T    +D L K
Sbjct: 815 FERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQK 874

Query: 138 NGYIVEAAELFRTLR 152
           +  + +AA +   LR
Sbjct: 875 DECLEQAAIVGAVLR 889


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 134/256 (52%), Gaps = 4/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A RLL++M   G++ + + Y+ LI GF   G+++ A  LF  M  +G   NVVTYN 
Sbjct: 463 MNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNA 522

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +INGY     V+++L L+ +M+  G  P+  TYN +  G  + +++  A     +M    
Sbjct: 523 IINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQG 582

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY +FIDGLCKNG    A ++F  ++       +  YS LIDGLC+ G+ E A 
Sbjct: 583 LLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE 642

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L       G  PNV TY  ++ G C  G+  +A  L   M+ KG+ P+   +  L++G 
Sbjct: 643 RLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQ 698

Query: 241 IRNNETSKVVELLHRM 256
            +N E    +++   M
Sbjct: 699 CKNLEVESALKIFDSM 714



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 135/291 (46%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  +L+ MI +G+ P    Y+  I   C  G    A +L   M   GC  NV TY  
Sbjct: 288 LEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTA 347

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  +    E ++ +Y +ML+ G+ PT VTY+ L + L+   + E AL +F+ M   D
Sbjct: 348 LISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHD 407

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-------------------------------- 148
               T TYN  I G C  GYI +A  +F                                
Sbjct: 408 SLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAM 467

Query: 149 RTLRVLK---CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           R L ++K    +L    Y+ LI G  + GKLE A+ LF  +   G+ PNVVTYN +I+G+
Sbjct: 468 RLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGY 527

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
               ++D A  LF  M   G  P+  T+N ++ G  + N  S+      +M
Sbjct: 528 LTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 128/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  ++  +   G  P+ F Y++LI G C  G +D A E+F  M  +GC  N VTY+ 
Sbjct: 218 VQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSA 277

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    +EE++++  EM+ KGI PTV  Y      L +  +   A+KL  +M+   
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRG 337

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   I GL ++G    A  ++  +           YS LI+ L   G+ ETA 
Sbjct: 338 CGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETAL 397

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +     +PN  TYN++I GFC+ G + KA  +F  M   G +PN +T+N ++   
Sbjct: 398 TIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIY 457

Query: 241 IRNNETSKVVELLHRM 256
            +    +  + LL  M
Sbjct: 458 FKQGYMNNAMRLLEMM 473



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 4/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+ + D M++ G  PN   Y+ +I  +   G ++ A  L   M  NG   +  TY  
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ +   +E + +L++EM+  GI P VVTYN + +G   + +V+ AL LF +M  S 
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               + TYN  I G  K   I EA      +        +  Y+  IDGLCK G+   A+
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F  + +    PN+ TY+ +I G C +GQ + A  L  D    G  PN  T+ TL+ G 
Sbjct: 608 KIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGL 663

Query: 241 IRNNETSKVVELLHRMDER 259
                  +  +L+  M ++
Sbjct: 664 CGKGRCYEADQLVESMKKK 682



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 39/295 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L + M++ G+ PN   Y+ +I+G+    ++D A  LF  M  +G + +  TYN 
Sbjct: 498 LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNM 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+ KT  + E+ N   +M+ +G+ P V+TY +   GL +  +   A K+F EM+  D
Sbjct: 558 MISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD 617

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ IDGLC+ G   +A  L        CE  ++ Y+ L+ GLC  G+   A 
Sbjct: 618 YFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEAD 673

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP------------ 228
           +L +S+ + GL P+   Y  ++ G C + +++ A  +F  M   G  P            
Sbjct: 674 QLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICAL 733

Query: 229 ---------NC--------------VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
                     C              V +  L+ G ++  ET   +ELLH M+ RN
Sbjct: 734 CKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRN 788



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 128/250 (51%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  G+ P A  YS LI+   + G  + A  +F  M  +  + N  TYN +I G+C    
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++++  ++ +ML  G  P V+TYN + H  F+   + +A++L + M+ + +  +T TY  
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I G  + G +  A  LF  +        +  Y+ +I+G   + K++ A  LF  +   G
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +P+  TYN+MI GF    ++ +A +    M  +G+ PN +T+ + + G  +N  TS   
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607

Query: 251 ELLHRMDERN 260
           ++ H M +R+
Sbjct: 608 KIFHEMKKRD 617



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 93/181 (51%)

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           ++Y EML+ GIRP + T+N +   L    +V+ A  +   + H     +T TY + I G 
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CKNG +  A E+F  +    C+     YS LI+GLC  G+LE A ++ + +   G+ P V
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTV 307

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
             Y I I   C+ G+  +A  L   M+ +G  PN  T+  L+ G  R+ +    + + H+
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367

Query: 256 M 256
           M
Sbjct: 368 M 368



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 96/199 (48%)

Query: 39  ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
            R++++ M  +G   N+ T+N +I   C    V+E+  +   +   G  P   TY +L  
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
           G  +   ++ A ++FD M        + TY+  I+GLC  G + EA ++   +     E 
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            + AY+  I  LC  G+   A +L   + + G  PNV TY  +I G   DG+ + A  ++
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 219 LDMEAKGVAPNCVTFNTLM 237
             M A G+ P  VT++ L+
Sbjct: 366 HKMLADGLVPTAVTYSALI 384



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 86/171 (50%)

Query: 89  TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
           T+ +++TL   L +         ++ EM +S +     T+N  I  LC  G + EA  + 
Sbjct: 166 TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIM 225

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
             +           Y+ LI G CK G L+ A+E+F  + + G  PN VTY+ +I+G C++
Sbjct: 226 GHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSE 285

Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G++++A D+  +M  KG+ P    +   ++       + + V+LL +M +R
Sbjct: 286 GRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKR 336



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 4/173 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A RLLD     G  PN   Y+TL+ G C  G    A +L  SM   G   +   Y  L
Sbjct: 639 EDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G CK  +VE +L ++  M++ G +P +  Y  L   L + +  + A  +F  M     
Sbjct: 695 LVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHW 754

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            ++   +   +DGL K G    + EL   +    C L  +    L   L  +G
Sbjct: 755 NSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALG 807



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 71/153 (46%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L++ M ++G++P+  +Y  L+ G C   E++ A ++F SM   G    +  Y  LI
Sbjct: 671 EADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALI 730

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK    +++  ++  ML K      V +  L  GL +  + + +L+L   M+  +  
Sbjct: 731 CALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCT 790

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
               T       L   G  +E  ++ + L ++K
Sbjct: 791 LNFQTRVMLARELSALGCSIEIPQISKQLGIVK 823


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 135/249 (54%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           I+ G+ PN   ++ +I G+CL  +   A E    M    C  + VTYNT+++  CK   +
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRL 259

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
            ++ +L  +M S+G+ P   TYN L +G  ++  ++ A  + + M  +++  +  TYN  
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           I+GLC  G I EA +L   +  LK    + +Y+ LI+G  +  K+  A++L + +   G+
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PN VT+NIM+  +C +G+MD A +    ME  G +P+CVT+NTL+ G  +     +   
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439

Query: 252 LLHRMDERN 260
            +  M  +N
Sbjct: 440 TMDEMGRKN 448



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 130/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL+ M ++GV+PNA  ++ ++  +C  G++D A      M+ +G   + VTYNT
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LINGYCK  ++ E+     EM  K ++   VT NT+   L    ++E A KL    +   
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y T I G  K+G +  A +L+  ++  +       Y+C+I GLC+ GK E A 
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                L   GL+P+  TYN ++HG+C +G ++KA      M      P+  T N L+ G 
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603

Query: 241 IRNNETSKVVELLH 254
                  K ++L +
Sbjct: 604 CMEGVLEKALKLFN 617



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 144/261 (55%), Gaps = 6/261 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ +++LM Q  + P+ + Y+ LI+G C  G I+ A +L   M+    + +VV+YNT
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING  +   + E+  L  EM  KG++P  VT+N +     +  +++ A     +M+ S 
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL---KCELGIEAYSCLIDGLCKIGKLE 177
            + +  TYNT I+G CK G + EA   FRT+  +     ++     + ++  LC+  KLE
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A++L  S  + G   + V+Y  +I G+  DG +D+A  L+ +M+ K + P+ VT+N ++
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G  +  +T + +  L+ + E
Sbjct: 531 GGLCQCGKTEQAISKLNELLE 551



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 139/261 (53%), Gaps = 4/261 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA R +D M ++ ++ ++   +T++   C   +++ A +L  S    G   + V+Y T
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY K  +V+ +L L+ EM  K I P+ VTYN +  GL +  + E A+   +E+  S 
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
           +  + +TYNT + G C+ G + +A +     ++++     + ++C  L+ GLC  G LE 
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHN--KMVENSFKPDVFTCNILLRGLCMEGVLEK 611

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A +LF +    G   + VTYN +I   C +G++D A +L  +ME K + P+  T+N ++ 
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIIT 671

Query: 239 GCIRNNETSKVVELLHRMDER 259
               +    +  E + +M E+
Sbjct: 672 ALTDSGRIREAEEFMSKMLEK 692



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 126/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  M  RG+ PN   Y+ L+ G+C  G +  A  +   M  N  + +V TYN 
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C    +EE+  L  EM +  + P VV+YNTL +G  E  ++  A KL +EM    
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     T+N  +   CK G + +A+     +           Y+ LI+G CK G +  A+
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                + R  +  + VT N ++   C + ++++A+ L      +G   + V++ TL++G 
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 241 IRNNETSKVVELLHRMDER 259
            ++    + ++L   M E+
Sbjct: 499 FKDGNVDRALKLWDEMKEK 517



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 116/231 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA +LL    +RG   +   Y TLI G+   G +DRA +L+  M     + + VTYN 
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G C+    E++++  +E+L  G+ P   TYNT+ HG      VE A +  ++M  + 
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T N  + GLC  G + +A +LF T       +    Y+ LI  LCK G+L+ A+
Sbjct: 589 FKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
            L   +    L P+  TYN +I    + G++ +A +    M  KG  P+ V
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 27/271 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +L D M ++ + P+   Y+ +I G C  G+ ++A      +  +G + +  TYNT
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYC+  DVE++   +++M+    +P V T N L  GL     +E ALKLF+      
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLIDGLCKIGKLET 178
            A +T TYNT I  LCK G + +A  L   +   + ELG +   Y+ +I  L   G++  
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEME--EKELGPDHYTYNAIITALTDSGRIRE 681

Query: 179 AWELFQSLPRVGLMPN-----------------------VVTYNIMIHGFCNDGQMDKAH 215
           A E    +   G +P+                        V Y+  I   C +G+   A 
Sbjct: 682 AEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAM 741

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            +F + + KG+  +  T+  LM G I+  ++
Sbjct: 742 RIFGESKQKGITVDKSTYINLMDGLIKRRKS 772



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDG---FCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           A ++   M +  +RPN    +TL++    +  +  +  +RE F      G + NV T+N 
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 61  LINGYC---KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +I GYC   K KD  E LN+   M      P  VTYNT+   L +  ++  A  L  +M+
Sbjct: 214 VIYGYCLENKFKDAVEFLNV---MGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMK 270

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +    +TYN  + G CK G++ EAA +   +        +  Y+ LI+GLC  G++E
Sbjct: 271 SRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIE 330

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A++L   +  + L+P+VV+YN +I+G     ++ +A  L  +M  KGV PN VT N ++
Sbjct: 331 EAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMV 390

Query: 238 LGCIRNNETSKVVELLHRMDE 258
               +  +       + +M+E
Sbjct: 391 KWYCKEGKMDDASNTITKMEE 411



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 132/273 (48%), Gaps = 42/273 (15%)

Query: 25  TLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
           +L+ GF  T   DR  +L +S+ +     +    +T I  Y ++     +  ++ +M   
Sbjct: 109 SLLLGFIAT---DRRHDLHLSI-LRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRL 164

Query: 85  GIRPTVVTYNTLFHGL------------------------------FEI--------HQV 106
            +RP ++T NTL + L                              F I        ++ 
Sbjct: 165 RLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKF 224

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           + A++  + M   + + +  TYNT +D LCK G + +A +L   ++          Y+ L
Sbjct: 225 KDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNIL 284

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           + G CK+G L+ A  + + + +  L+P+V TYN++I+G CN+G++++A  L  +ME   +
Sbjct: 285 VYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKL 344

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            P+ V++NTL+ GC+  ++ S+  +LL  M E+
Sbjct: 345 LPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK 377



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG---FCNDGQMDKAHDLFLDMEA 223
           I    + G+   A+++F+ + R+ L PN++T N +++    + +   +  + + F D   
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIK 201

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            G+ PN  TFN ++ G    N+    VE L+ M + N
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN 238


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 151/293 (51%), Gaps = 35/293 (11%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   +   M  R V P+   +S+++  F  +G +D+A   F S+   G + + V Y  LI
Sbjct: 348 ETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 407

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYC+   + E++NL +EML +G    VVTYNT+ HGL +   +  A KLF+EM    + 
Sbjct: 408 QGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLF 467

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            ++ T    IDG CK G +  A ELF+ ++  + +L +  Y+ L+DG  K+G ++TA E+
Sbjct: 468 PDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEI 527

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH--------------------------- 215
           +  +    ++P  ++++I+++  C+ G + +A                            
Sbjct: 528 WADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCR 587

Query: 216 -------DLFLD-MEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
                  ++FL+ M ++G  P+C+++NTL+ G ++    SK   L+ +M+E+ 
Sbjct: 588 SGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 126/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  L+  M  +G  P  + Y+T+I+G C  G+ +RA+E+F  M  +G   +  TY +
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK  D  E+ N++S+M S+ + P +V ++++         ++ AL  F+ ++ + 
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   I G C+ G I EA  L   +    C + +  Y+ ++ GLCK   L  A 
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +LF  +   GL P+  T  I+I G C  G +  A +LF  M+ K +  + VT+NTL+ G
Sbjct: 456 KLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDG 514



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 133/256 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R+   + + GV  N +  + +++  C  G++++       +   G   ++VTYNTLI+
Sbjct: 209 AWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLIS 268

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            Y     +EE+  L   M SKG  P V TYNT+ +GL +  + E A ++F EM  S ++ 
Sbjct: 269 AYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 328

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +++TY + +   CK G  VE   +F  +R       +  +S ++    + G L+ A   F
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 388

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
            S+   GL+P+ V Y I+I G+C  G + +A +L  +M  +G A + VT+NT++ G  + 
Sbjct: 389 NSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 448

Query: 244 NETSKVVELLHRMDER 259
               +  +L + M ER
Sbjct: 449 KMLGEADKLFNEMTER 464



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 142/264 (53%), Gaps = 8/264 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +L + M +RG+ P+++  + LIDG C  G +  A ELF  M       +VVTYNT
Sbjct: 451 LGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNT 510

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+ K  D++ +  ++++M+SK I PT ++++ L + L     +  A +++DEM    
Sbjct: 511 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKS 570

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE---AYSCLIDGLCKIGKLE 177
           +       N+ I G C++G   +  E+F  L  +  E  +    +Y+ LI G  K   + 
Sbjct: 571 IKPTVMICNSMIKGYCRSGNASDG-EIF--LEKMISEGFVPDCISYNTLIYGFVKEENMS 627

Query: 178 TAWELFQSL--PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
            A+ L + +   + GL+P+V TYN ++HGFC + QM +A  +   M  +GV P+  T+ +
Sbjct: 628 KAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTS 687

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           L+ G +  +  ++       M +R
Sbjct: 688 LINGFVSQDNLTEAFRFHDEMLQR 711



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 109/240 (45%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  V+  LI  F    ++  A E F  +   G   ++   N LI    +   VE +  +Y
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E+   G+   V T N + + L +  ++E       E+Q   V  +  TYNT I      
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA EL   +       G+  Y+ +I+GLCK GK E A E+F  + R GL P+  TY
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             ++   C  G   +  ++F DM ++ V P+ V F+++M    R+    K +   + + E
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 393



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 102/212 (48%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           + C  N   ++ LI  + + + + E+   ++ + SKG   ++   N L   L  I  VE 
Sbjct: 149 SNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVEL 208

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A +++ E+  S V     T N  ++ LCK+G + +       ++       I  Y+ LI 
Sbjct: 209 AWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLIS 268

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
                G +E A+EL  ++P  G  P V TYN +I+G C  G+ ++A ++F +M   G++P
Sbjct: 269 AYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 328

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +  T+ +L++   +  +  +   +   M  R+
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 75/142 (52%)

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
           +S+  +  S ++  I    +   + EA E F  LR     + I+A + LI  L +IG +E
Sbjct: 148 YSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVE 207

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            AW ++Q + R G+  NV T NIM++  C DG+M+K      +++ KGV P+ VT+NTL+
Sbjct: 208 LAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLI 267

Query: 238 LGCIRNNETSKVVELLHRMDER 259
                     +  EL+H M  +
Sbjct: 268 SAYSSQGLMEEAFELMHAMPSK 289



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q G+ P+ F Y++++ GFC   ++  A  +   M   G   +  TY +LING+    ++ 
Sbjct: 640 QGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLT 699

Query: 73  ESLNLYSEMLSKGIRP 88
           E+   + EML +G  P
Sbjct: 700 EAFRFHDEMLQRGFSP 715


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 129/253 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS + D  +  G+ PN   Y  LI+GFC  G+++ A  L   M + G   N + +NT+I+
Sbjct: 191 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 250

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+   V+++L +   M   GI   V TYNTL  GL   ++++ A  L   M    V  
Sbjct: 251 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 310

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y T I   C  G +VEA  LFR +     E  +  Y+ ++DG  K G +  A    
Sbjct: 311 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 370

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + GL+P++ +Y  ++HG C +G++D A  LF +M+ +G  PN V +  L+ G  + 
Sbjct: 371 NEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE 430

Query: 244 NETSKVVELLHRM 256
             + +  +L   M
Sbjct: 431 GRSEEAFQLYDNM 443



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 127/258 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D  + +L +M   G+ P    Y+ L+DG     +I +   +F  M       +V  Y+++
Sbjct: 119 DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSV 178

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN YC+  +V  +  ++ E +  GI P   TY  L +G  +I Q+E A  L  +MQ   V
Sbjct: 179 INAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGV 238

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 +NT IDG C+   + +A E+   +  +  EL +  Y+ L  GL +  +++ A  
Sbjct: 239 GINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKN 298

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G+ PN V+Y  +I   CN+G M +A  LF +M   G  P+ VT+N +M G I
Sbjct: 299 LLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYI 358

Query: 242 RNNETSKVVELLHRMDER 259
           +     +     + M+++
Sbjct: 359 KKGSIREAERFKNEMEKK 376



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 122/237 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L+  M  RGV  N  V++T+IDG+C    +D+A E+ + M+  G   +V TYNT
Sbjct: 223 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 282

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G  +   ++E+ NL   M+ KG+RP  V+Y TL         +  A +LF EM  + 
Sbjct: 283 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 342

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  +DG  K G I EA      +        I +Y+ L+ G C  GK++ A 
Sbjct: 343 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 402

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ + + G  PN+V Y  +I G   +G+ ++A  L+ +M   G+ P+   ++ L+
Sbjct: 403 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 2/235 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LLD M + GV+ NA  Y++L+D +    + DR  E+   M+  G    V TY  L++
Sbjct: 86  ARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 145

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G    +D+ +   ++ EM SK +   V  Y+++ +       V  A ++FDE   + +  
Sbjct: 146 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 205

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRT-LRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              TY   I+G CK G + EAAE+  T ++V    +    ++ +IDG C+   ++ A E+
Sbjct: 206 NEHTYGALINGFCKIGQM-EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI 264

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              + ++G+  +V TYN +  G     +MD+A +L   M  KGV PN V++ TL+
Sbjct: 265 KMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLI 319



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 35/229 (15%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           S ++DG+C +G +  AR+L   M  +G   N + YN+L++ Y + KD +    +   M +
Sbjct: 71  SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 130

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           +GI PTV TY  L                                   +DGL     I +
Sbjct: 131 EGIEPTVGTYTIL-----------------------------------VDGLSAARDITK 155

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
              +F  ++       +  YS +I+  C+ G +  A E+F      G+ PN  TY  +I+
Sbjct: 156 VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALIN 215

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           GFC  GQM+ A  L  DM+ +GV  N + FNT++ G  R N   K +E+
Sbjct: 216 GFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI 264



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 106/212 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +  +M + G+  + + Y+TL  G      +D A+ L   M   G   N V+Y T
Sbjct: 258 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTT 317

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +C   D+ E+  L+ EM   G  P++VTYN +  G  +   +  A +  +EM+   
Sbjct: 318 LISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKG 377

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y   + G C NG +  A  LF  ++    +  + AY+ LI GL K G+ E A+
Sbjct: 378 LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 437

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
           +L+ ++   GL P+   Y+ ++     D + +
Sbjct: 438 QLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 469



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 49/97 (50%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           S ++DG CK G++  A +L   +PR G+  N + YN ++  +  +   D+  ++   ME 
Sbjct: 71  SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 130

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +G+ P   T+  L+ G     + +KV  +   M  +N
Sbjct: 131 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 167


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 133/258 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A R+LD M ++G  PN   YSTL+  FC  G  D AR +   M   G   N   YN +I
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII 425

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              CK   ++++  L  EM S+G +P + TYNT+ + L     +E A  +F  +    V 
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYNT I  L +NG   E   L   + +  C+L + +Y+ LI  LCK G ++ +  L
Sbjct: 486 ANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMAL 545

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +   G+ PN  +YN++I+  C  G++  A +L  +M  +G+ P+ VT+NTL+ G  +
Sbjct: 546 LEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 605

Query: 243 NNETSKVVELLHRMDERN 260
              T   + LL ++   N
Sbjct: 606 VGWTHAALNLLEKLPNEN 623



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 130/254 (51%), Gaps = 4/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+RL+D M+ +G  P+   Y  L+ G C T + D A  +   +       NVV  NT+I
Sbjct: 265 EAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP----EVNVVMLNTVI 320

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G      +  +  LY  M SKG  P V TY+ L HGL ++ +   A+++ DEM+    A
Sbjct: 321 RGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCA 380

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+T +   C+NG   +A  +   +      +  + Y+ +I  LCK GKL+ A  L
Sbjct: 381 PNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRL 440

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            Q +   G  P++ TYN MI+  CN+  M++A  +F ++  +GV  N +T+NTL+   +R
Sbjct: 441 VQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLR 500

Query: 243 NNETSKVVELLHRM 256
           N    + + L   M
Sbjct: 501 NGRWQEGLRLASEM 514



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 121/257 (47%), Gaps = 4/257 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  M + G  P+A +Y T+I      G +  A  L   M + GC  +V T+N L+
Sbjct: 195 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLV 254

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G C    V E+  L   M+++G  P+VVTY  L  GL    Q + A  +   +   +V 
Sbjct: 255 LGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV 314

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                 NT I G    G +  A EL+  +    C   +  YS L+ GLCK+G+  +A  +
Sbjct: 315 ----MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRM 370

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  PN+VTY+ ++H FC +G  D A  +   M AKG + N   +N ++    +
Sbjct: 371 LDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCK 430

Query: 243 NNETSKVVELLHRMDER 259
           + +  +   L+  M  +
Sbjct: 431 DGKLDQATRLVQEMKSQ 447



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 123/236 (52%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  +LD M+ +G   N+  Y+ +I   C  G++D+A  L   M   GC  ++ TYNT+
Sbjct: 400 DDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTM 459

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I   C    +EE+ +++  ++ +G+    +TYNTL H L    + +  L+L  EM     
Sbjct: 460 IYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGC 519

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +YN  I  LCK G +  +  L   +     +    +Y+ LI+ LCK GK+  A E
Sbjct: 520 QLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALE 579

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           L + +   GL P++VTYN +I+G C  G    A +L   +  + V P+ VT+N L+
Sbjct: 580 LSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 635



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 126/243 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A+RL+  M  +G +P+   Y+T+I   C    ++ A  +F ++   G + N +TYNT
Sbjct: 434 LDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNT 493

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   +    +E L L SEML  G +  V++YN L   L +   V+ ++ L +EM    
Sbjct: 494 LIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG 553

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     +YN  I+ LCK G + +A EL + +        I  Y+ LI+GLCK+G    A 
Sbjct: 554 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 613

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + LP   + P++VTYNI+I   C    +D A  L     + G+ PN  T+  ++   
Sbjct: 614 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673

Query: 241 IRN 243
           +R 
Sbjct: 674 VRQ 676



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 5/258 (1%)

Query: 3   EASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            A  LLD M +R  V P+   Y+ ++           A  L+  M  +       T+   
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
               C+     ++L L   M   G  P  V Y T+ H L     V  A  L DEM     
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           AA+ +T+N  + GLC  G + EAA L   +    C   +  Y  L+ GLC+  + + A  
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   LP V    NVV  N +I G   +G++ +A +L+  M +KG  P+  T++ LM G  
Sbjct: 304 MLGRLPEV----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 242 RNNETSKVVELLHRMDER 259
           +       V +L  M+E+
Sbjct: 360 KLGRFGSAVRMLDEMEEK 377



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 1/189 (0%)

Query: 73  ESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
            +L+L  +M  +  + P+  +YN +   L        AL L+  M    V   T T+   
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
              LC+ G   +A  L R +    C      Y  +I  L   G +  A  L   +  +G 
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
             +V T+N ++ G C  G++ +A  L   M  +G  P+ VT+  L+ G  R  +  +   
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 252 LLHRMDERN 260
           +L R+ E N
Sbjct: 304 MLGRLPEVN 312


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 141/245 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  L   M Q G+ P+   Y++LIDG+   G +D +  LF  M   GC  +V+TYN 
Sbjct: 268 MVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNA 327

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN +CK + + ++ +   EM + G++P VVTY+TL   L + H ++ A+K   +M+   
Sbjct: 328 LINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVG 387

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TY + ID  CK GY+ +A +L   +  ++    +  Y+ L+DGLCK G++  A 
Sbjct: 388 LSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAE 447

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+++ + G+ PN+ TY  ++HG   + +++ A +L  +++ K + P+ + + T++ G 
Sbjct: 448 DLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGL 507

Query: 241 IRNNE 245
              N+
Sbjct: 508 CSQNK 512



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 127/245 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D +++    M+  G+  + F Y+ +I   C  G++  A+ LF  M   G   ++VTYN+L
Sbjct: 234 DLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSL 293

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+GY K   ++ES  L+ EM   G  P V+TYN L +   +  Q+  A     EM++S +
Sbjct: 294 IDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGL 353

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY+T ID LCK   + +A +    +R +        Y+ LID  CK G L  A +
Sbjct: 354 KPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALK 413

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   + +V +  NVVTY  ++ G C +G+M +A DLF  M   GV PN  T+  L+ G I
Sbjct: 414 LADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHI 473

Query: 242 RNNET 246
           +N   
Sbjct: 474 KNKRV 478



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 134/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A +L D M+Q  V  N   Y+TL+DG C  G +  A +LF +M   G   N+ TY  
Sbjct: 408 LSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTA 467

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+ K K VE +L L  E+  K I+P ++ Y T+  GL   +++E    +  EM+   
Sbjct: 468 LVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACG 527

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A +  Y   +D   K G  VEA  L + +  L  E+ I  +  LIDGLCK G +E A 
Sbjct: 528 IRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAI 587

Query: 181 ELFQSLPRVGLMP-NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + F  +    L P NV     +I G C +  ++ A  LF +M+ K + P+ + +  L+ G
Sbjct: 588 DYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDG 647

Query: 240 CIRNNETSKVVELLHRMDE 258
            +++ +  + + +  RM E
Sbjct: 648 NLKHKDFQEALNIRSRMSE 666



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 128/296 (43%), Gaps = 36/296 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A   L  M   G++PN   YSTLID  C    + +A +  + M   G   N  TY +
Sbjct: 338 MPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTS 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   + ++L L  EML   +   VVTY TL  GL +  ++  A  LF  M  + 
Sbjct: 398 LIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAG 457

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAE---------------LFRTL--------RVLKCE 157
           V     TY   + G  KN  +  A E               L+ T+        ++ +CE
Sbjct: 458 VTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECE 517

Query: 158 L--------GIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
                    GI A    Y+  +D   K GK   A  L Q +  +G+   +VT+ ++I G 
Sbjct: 518 FVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGL 577

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML-GCIRNNETSKVVELLHRMDERN 260
           C  G +++A D F  M    + PN V   T ++ G  +NN      +L   M ++N
Sbjct: 578 CKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKN 633



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 106/208 (50%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           N C+     ++ L + + +   +EE+   +S M    + P   + N   + L +  + + 
Sbjct: 176 NVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDL 235

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           + K F +M  + +A    TYN  I  +CK G +V A  LF  ++ +     I  Y+ LID
Sbjct: 236 SNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLID 295

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           G  K+G L+ ++ LF+ +  VG  P+V+TYN +I+ FC   QM KA     +M+  G+ P
Sbjct: 296 GYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKP 355

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRM 256
           N VT++TL+    + +   + ++ L  M
Sbjct: 356 NVVTYSTLIDALCKEHMLQQAIKFLLDM 383



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 9/217 (4%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+  +Y T+I G C   +++    +   M   G   N V Y   ++ Y KT    E+LNL
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNL 554

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-----QHSDVAAETSTYNTFI 132
             EM   G+  T+VT+  L  GL +   VE A+  F  M     Q ++VA  T+     I
Sbjct: 555 LQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTA----LI 610

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
           DGLCKN YI  A +LF  ++         AY+ LIDG  K    + A  +   +  +G+ 
Sbjct: 611 DGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGME 670

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            ++  Y  ++ G      + +A     +M  KG+ P+
Sbjct: 671 LDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPD 707



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 1/218 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E   ++  M   G+R N+ +Y+  +D +  TG+   A  L   M   G    +VT+  
Sbjct: 513 LEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCV 572

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPT-VVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G CK   VEE+++ ++ M    ++P  V     L  GL + + +E A KLFDEMQ  
Sbjct: 573 LIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDK 632

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           ++  +   Y   IDG  K+    EA  +   +  L  EL + AY+ L+ GL +   ++ A
Sbjct: 633 NMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQA 692

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
                 +   G++P+ +    ++  +   G +D+A +L
Sbjct: 693 RMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 19/244 (7%)

Query: 21  FVYSTLIDGFCLTGE--------IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           F ++    GFCLT E        +  AR  F   D N  +  +++   ++ G+    DV 
Sbjct: 116 FRWAKTKFGFCLTTESYCLLVHILFYARMYF---DANFFLKELISSRRILPGF----DVF 168

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E L     +   G       ++ LF    E+  +E A + F  M    V  +  + N F+
Sbjct: 169 EVLWSTRNVCVPGFG----VFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFL 224

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
             L K G    + + FR +        +  Y+ +I  +CK G + TA  LF  + ++GL 
Sbjct: 225 YRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLT 284

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P++VTYN +I G+   G +D++  LF +M+  G  P+ +T+N L+    +  +  K    
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHF 344

Query: 253 LHRM 256
           LH M
Sbjct: 345 LHEM 348



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 38/151 (25%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D  +R+ D  +Q     N  V + LIDG C    I+ A++LF  M     + + + Y  
Sbjct: 587 IDYFARMADFNLQPN---NVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTA 643

Query: 61  LINGYCKTKDVEESLNLYS-----------------------------------EMLSKG 85
           LI+G  K KD +E+LN+ S                                   EM+ KG
Sbjct: 644 LIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKG 703

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           I P  +    L    +E+  ++ A++L DE+
Sbjct: 704 IVPDEILCIRLLRKYYELGSIDEAIELHDEL 734



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 2/132 (1%)

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLK--CELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           N F+  L  +  I+   ++F  L   +  C  G   +  L     ++G LE A + F  +
Sbjct: 149 NFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRM 208

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R  + P   + N  ++     G+ D ++  F DM   G+A +  T+N ++    +  + 
Sbjct: 209 TRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDM 268

Query: 247 SKVVELLHRMDE 258
                L H+M +
Sbjct: 269 VTAKSLFHQMKQ 280


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 127/242 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +  +M Q G++P    Y+T++D +C  G +D+A EL   M   GC  N VTYN 
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K  ++E++  L  EML+ G+  +  TYN L +G  +      A  L +EM +  
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                STYNT + GLCK   +      F  +   K    I +++ L+ G C+ G +  A+
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L    L+P V+TYN +IHG C  G +D A  L  +M  +G+ P+  T+  L+ GC
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 241 IR 242
            +
Sbjct: 436 FK 437



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LL  M +RG  PN   Y+ L++G    GE+++A+ L   M  +G   +  TYN 
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C+     E+ +L  EM+++   PT+ TYNTL +GL +  QV      F +M  S 
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  ++N+ + G C+ G I EA  LF  L+       +  Y+ LI GLC  G L+ A 
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   GL P++ TY I+++G    G +  A   F +M +KG+ P+   +NT ++G 
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGE 470

Query: 241 IRNNETSKVVELLHRM 256
           ++  +TS    +   M
Sbjct: 471 MKIADTSVAFSMQEEM 486



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 120/259 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L D +  R + P    Y+TLI G C+ G +D A  L   M   G   ++ TY  
Sbjct: 371 ISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTI 430

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K   V  +   ++EMLSKG++P    YNT   G  +I     A  + +EM  + 
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN F+  LC+ G   EA +L   +           Y+ +I+G  K G L  A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +   G+ P+VVTY ++IH       +D A   F  M  K V  N +T+N ++ G 
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610

Query: 241 IRNNETSKVVELLHRMDER 259
                  +  +    M+E+
Sbjct: 611 CMTRRMDEAYKYFDEMEEK 629



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 116/237 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL   M  +G+ P+ F Y+ L++G    G +  AR  F  M   G   +   YNT
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G  K  D   + ++  EML+ G  P V+TYN   H L +    E A  L + M    
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I+G  KNG++ +A E+F  +        +  Y+ LI        L+ A+
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             F  +    +  NV+TYN +I+G C   +MD+A+  F +ME KG+ PN  ++  L+
Sbjct: 586 MYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 42  LFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
           +F  M  NG + +V   N ++        + ++ N+Y  M   GI+PTVVTYNT+     
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           +  +V+ AL+L  EMQ         TYN  ++GL K G + +A  L   +  L   L + 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM--LNSGLNVS 284

Query: 162 AYS--CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           AY+   LI+G C+ G    A++L + +      P + TYN +++G C   Q+      F 
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           DM      P+ V+FN+L+ G  R    S+   L   +  R+
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 83/150 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  LL+ M+  G+ P+   Y+++I+GF   G + +ARE+F  M   G   +VVTY  L
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVL 571

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +   + ++ +   +S+ML K +   V+TYN + +GL    +++ A K FDEM+   +
Sbjct: 572 IHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGI 631

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
                +Y   I+  C  GY  EA  L+R +
Sbjct: 632 LPNKFSYTILINESCNMGYWEEALRLYREM 661



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 1/151 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M+ +GV P+   Y+ LI        +D A   F  M       NV+TYN 
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C T+ ++E+   + EM  KGI P   +Y  L +    +   E AL+L+ EM    
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           +  ++ T++ F+  L ++ Y V A +   +L
Sbjct: 666 IQPDSFTHSVFLKNLHRD-YQVHAVQCVESL 695


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 128/259 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M+   +  +  +Y+ LI GF   G ID+A ++   M  NGC  ++VTYN 
Sbjct: 349 VDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNI 408

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+N YC    +E++  L  +M + G+ P   +YN L  GL + HQ++ A     +     
Sbjct: 409 LLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVG 468

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T + N  ID  CK   +  A ELF+ +     +     Y  LI+GL  +G    A 
Sbjct: 469 GFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAE 528

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF+ +    + PNV  YNIM+H  C  G   +A  +F  M  K V+P+ VTFNTL+   
Sbjct: 529 ELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWL 588

Query: 241 IRNNETSKVVELLHRMDER 259
            + +   + + L   M  R
Sbjct: 589 GKRSRAIEALNLFKDMRTR 607



 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 127/248 (51%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D   +  D+ + +G     F YS  I   C +  I+  +EL V MD  GC  ++   N  
Sbjct: 210 DLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIY 269

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I   CK   + ++L +  +M +KG  P VVTY T+  GL +  +   A+ L++EM   D+
Sbjct: 270 IYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDL 329

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  +    I GLCKN  + EA EL   +  L  EL +  Y+ LI G  + G ++ A++
Sbjct: 330 KPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYK 389

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   +   G  P++VTYNI+++ +C  G M+KA  L   ME  GV P+  ++N L+ G  
Sbjct: 390 IISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLC 449

Query: 242 RNNETSKV 249
           + ++  K 
Sbjct: 450 KTHQLDKA 457



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +++  M   G  P+   Y+ L++ +C  G +++A +L   M+ +G   +  +YN 
Sbjct: 384 IDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQ 443

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G CKT  ++++    S+ +  G     V+ N L     +  +V+ AL+LF EM +  
Sbjct: 444 LLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKG 503

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TY T I+GL   GY   A ELF  +   + +  +  Y+ ++  LCK+G  + A 
Sbjct: 504 MQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQ 563

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  + +  + P+ VT+N +I+      +  +A +LF DM  +GV P+ +TF  L+ G 
Sbjct: 564 TIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGL 623

Query: 241 IRNNETSKVVELLHRMDE 258
           +   +++   E+   M E
Sbjct: 624 LDEGKSTLAYEVWEYMME 641



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 120/256 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A ++++ M  +G  P+   Y T++ G C   +   A  L+  M       +V +   
Sbjct: 279 LPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGA 338

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK   V+E+  L S ML+  I  +V  YN L  G +    ++ A K+   M+ + 
Sbjct: 339 LIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNG 398

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN  ++  C  G + +A +L R +          +Y+ L+ GLCK  +L+ A+
Sbjct: 399 CEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAF 458

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                   VG   + V+ NI+I  FC   ++  A +LF +M  KG+  + VT+ TL+ G 
Sbjct: 459 AFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGL 518

Query: 241 IRNNETSKVVELLHRM 256
                 +   EL  +M
Sbjct: 519 FSVGYYNLAEELFEQM 534



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 83/167 (49%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           LID FC T ++  A ELF  M   G   + VTY TLING         +  L+ +ML+  
Sbjct: 479 LIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQ 538

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
           I P V  YN + H L ++   + A  +F  M   +V+ +T T+NT I  L K    +EA 
Sbjct: 539 IDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEAL 598

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
            LF+ +R    E     +  LI GL   GK   A+E+++ +   G++
Sbjct: 599 NLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGII 645



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 108/252 (42%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           S  L  +  +GV  +  +Y  L+ G+   G+ D   E F  M ++GC    V YN  I  
Sbjct: 143 SEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGV 202

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
             K    +     Y   L+KG   T  TY+     L + +++E   +L  +M     + +
Sbjct: 203 LVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPD 262

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
               N +I  LCK   + +A ++   +R       +  Y  ++ GLC   K   A  L++
Sbjct: 263 IWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWE 322

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            + +  L P+V +   +I G C + ++D+A +L   M    +  +   +N L+ G  R  
Sbjct: 323 EMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAG 382

Query: 245 ETSKVVELLHRM 256
              K  +++  M
Sbjct: 383 SIDKAYKIISFM 394



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 102/242 (42%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G   + F  + L+    + G      E    +   G   +   Y  L++GY +    +  
Sbjct: 118 GFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSV 177

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           +  + EM+  G R   V YN     L +    +   K +D            TY+ +I  
Sbjct: 178 IETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISA 237

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LC++  I    EL   +  L C   I A +  I  LCK  +L  A ++ + +   G  P+
Sbjct: 238 LCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPD 297

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           VVTY  ++ G C++ +  +A  L+ +M  + + P+  +   L+ G  +NN+  +  EL  
Sbjct: 298 VVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELAS 357

Query: 255 RM 256
           RM
Sbjct: 358 RM 359



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 8/190 (4%)

Query: 77  LYSEML----SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           L SE L    S+G+      Y  L  G     + +  ++ FDEM  S        YN +I
Sbjct: 141 LLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYI 200

Query: 133 DGLCKNGYIVEAAELFRTLRVLK--CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
             L KN    +  E +  + + K  C L    YS  I  LC+  ++E   EL   + ++G
Sbjct: 201 GVLVKNC-CFDLVEKYYDMALAKGFC-LTPFTYSRWISALCQSNRIELVQELLVDMDKLG 258

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
             P++   NI I+  C   ++  A  +   M  KG +P+ VT+ T++ G   N + ++ +
Sbjct: 259 CSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAI 318

Query: 251 ELLHRMDERN 260
            L   M +R+
Sbjct: 319 GLWEEMVKRD 328



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  L + M+   + PN  +Y+ ++   C  G   RA+ +F  M       + VT+NTLI 
Sbjct: 527 AEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIY 586

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
              K     E+LNL+ +M ++G+ P  +T+  L  GL +  +   A ++++ M  + +
Sbjct: 587 WLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGI 644


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 127/242 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  +  +M Q G++P    Y+T++D +C  G +D+A EL   M   GC  N VTYN 
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K  ++E++  L  EML+ G+  +  TYN L +G  +      A  L +EM +  
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                STYNT + GLCK   +      F  +   K    I +++ L+ G C+ G +  A+
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  L    L+P V+TYN +IHG C  G +D A  L  +M  +G+ P+  T+  L+ GC
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 241 IR 242
            +
Sbjct: 436 FK 437



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  LL  M +RG  PN   Y+ L++G    GE+++A+ L   M  +G   +  TYN 
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C+     E+ +L  EM+++   PT+ TYNTL +GL +  QV      F +M  S 
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  ++N+ + G C+ G I EA  LF  L+       +  Y+ LI GLC  G L+ A 
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + +   GL P++ TY I+++G    G +  A   F +M +KG+ P+   +NT ++G 
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGE 470

Query: 241 IRNNETSKVVELLHRM 256
           ++  +TS    +   M
Sbjct: 471 MKIADTSVAFSMQEEM 486



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 120/259 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L D +  R + P    Y+TLI G C+ G +D A  L   M   G   ++ TY  
Sbjct: 371 ISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTI 430

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K   V  +   ++EMLSKG++P    YNT   G  +I     A  + +EM  + 
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYN F+  LC+ G   EA +L   +           Y+ +I+G  K G L  A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+F  +   G+ P+VVTY ++IH       +D A   F  M  K V  N +T+N ++ G 
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610

Query: 241 IRNNETSKVVELLHRMDER 259
                  +  +    M+E+
Sbjct: 611 CMTRRMDEAYKYFDEMEEK 629



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 116/237 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL   M  +G+ P+ F Y+ L++G    G +  AR  F  M   G   +   YNT
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G  K  D   + ++  EML+ G  P V+TYN   H L +    E A  L + M    
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY + I+G  KNG++ +A E+F  +        +  Y+ LI        L+ A+
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             F  +    +  NV+TYN +I+G C   +MD+A+  F +ME KG+ PN  ++  L+
Sbjct: 586 MYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 42  LFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLF 101
           +F  M  NG + +V   N ++        + ++ N+Y  M   GI+PTVVTYNT+     
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
           +  +V+ AL+L  EMQ         TYN  ++GL K G + +A  L   +  L   L + 
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM--LNSGLNVS 284

Query: 162 AYS--CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           AY+   LI+G C+ G    A++L + +      P + TYN +++G C   Q+      F 
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           DM      P+ V+FN+L+ G  R    S+   L   +  R+
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 83/150 (55%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  LL+ M+  G+ P+   Y+++I+GF   G + +ARE+F  M   G   +VVTY  L
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVL 571

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +   + ++ +   +S+ML K +   V+TYN + +GL    +++ A K FDEM+   +
Sbjct: 572 IHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGI 631

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
                +Y   I+  C  GY  EA  L+R +
Sbjct: 632 LPNKFSYTILINESCNMGYWEEALRLYREM 661



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 1/151 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  + + M+ +GV P+   Y+ LI        +D A   F  M       NV+TYN 
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C T+ ++E+   + EM  KGI P   +Y  L +    +   E AL+L+ EM    
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           +  ++ T++ F+  L ++ Y V A +   +L
Sbjct: 666 IQPDSFTHSVFLKNLHRD-YQVHAVQCVESL 695


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 142/262 (54%), Gaps = 4/262 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+   LL+ M   GV PN  +Y+T++  FC  G  D + ++   M   G + ++VT+N+ 
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258

Query: 62  INGYCKTKDVEESLNLYSEM-LSKGI---RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           I+  CK   V ++  ++S+M L + +   RP  +TYN +  G  ++  +E A  LF+ ++
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            +D  A   +YN ++ GL ++G  +EA  + + +        I +Y+ L+DGLCK+G L 
Sbjct: 319 ENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLS 378

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  +   + R G+ P+ VTY  ++HG+C+ G++D A  L  +M      PN  T N L+
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438

Query: 238 LGCIRNNETSKVVELLHRMDER 259
               +    S+  ELL +M+E+
Sbjct: 439 HSLWKMGRISEAEELLRKMNEK 460



 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 136/280 (48%), Gaps = 23/280 (8%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  M  +G+ P+ + Y+ L+DG C  G +  A+ +   M  NG   + VTY  L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC    V+ + +L  EM+     P   T N L H L+++ ++  A +L  +M      
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-----------------------KCELG 159
            +T T N  +DGLC +G + +A E+ + +RV                         C   
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           +  YS L++GLCK G+   A  LF  +    L P+ V YNI IH FC  G++  A  +  
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           DME KG   +  T+N+L+LG    N+  ++  L+  M E+
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 123/240 (51%), Gaps = 6/240 (2%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           S L   M+  G+ P  + ++ LI   C +  +D ARELF  M   GC  N  T+  L+ G
Sbjct: 132 SWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRG 191

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           YCK    ++ L L + M S G+ P  V YNT+        + + + K+ ++M+   +  +
Sbjct: 192 YCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD 251

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-----AYSCLIDGLCKIGKLETA 179
             T+N+ I  LCK G +++A+ +F  +  L   LG+       Y+ ++ G CK+G LE A
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDME-LDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+S+     + ++ +YNI + G    G+  +A  +   M  KG+ P+  ++N LM G
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 23/283 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  ++ LM + GV P+A  Y  L+ G+C  G++D A+ L   M  N C+ N  T N 
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K   + E+  L  +M  KG     VT N +  GL    +++ A+++   M+   
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496

Query: 121 VAA-----------------------ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
            AA                       +  TY+T ++GLCK G   EA  LF  +   K +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
               AY+  I   CK GK+ +A+ + + + + G   ++ TYN +I G     Q+ + H L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +M+ KG++PN  T+NT +       +      LL  M ++N
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 1/251 (0%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D +I+    P+   YSTL++G C  G    A+ LF  M       + V YN  I+ +CK 
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             +  +  +  +M  KG   ++ TYN+L  GL   +Q+     L DEM+   ++    TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT I  LC+   + +A  L   +        + ++  LI+  CK+   + A E+F++   
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +      + Y++M +     GQ+ KA +L   +  +G       +  L+    + +E   
Sbjct: 693 ICGQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEV 751

Query: 249 VVELLHRMDER 259
              +LH+M +R
Sbjct: 752 ASGILHKMIDR 762



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 100/223 (44%), Gaps = 1/223 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M+   ++P++  Y+  I  FC  G+I  A  +   M+  GC  ++ TYN+LI
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G      + E   L  EM  KGI P + TYNT    L E  +VE A  L DEM   ++A
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 661

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               ++   I+  CK      A E+F T  V  C      YS + + L   G+L  A EL
Sbjct: 662 PNVFSFKYLIEAFCKVPDFDMAQEVFET-AVSICGQKEGLYSLMFNELLAAGQLLKATEL 720

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            +++   G       Y  ++   C   +++ A  +   M  +G
Sbjct: 721 LEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 12/251 (4%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P+ ++Y+ L++       ++    L+  M + G      T+N LI   C +  V+ +  
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L+ EM  KG +P   T+  L  G  +    +  L+L + M+   V      YNT +   C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ--------SLPR 188
           + G   ++ ++   +R       I  ++  I  LCK GK+  A  +F          LPR
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
               PN +TYN+M+ GFC  G ++ A  LF  +       +  ++N  + G +R+ +  +
Sbjct: 289 ----PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344

Query: 249 VVELLHRMDER 259
              +L +M ++
Sbjct: 345 AETVLKQMTDK 355



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 6/262 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A R+L  M ++G   +   Y++LI G  +  +I     L   M   G   N+ TYNT
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I   C+ + VE++ NL  EM+ K I P V ++  L     ++   + A ++F E   S 
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSI 693

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+   + L   G +++A EL   +     ELG   Y  L++ LCK  +LE A 
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH---DLFLDMEAKGVAPNCVTFNTLM 237
            +   +   G   +      +I G    G   +A+   D  ++M + G   N V  N   
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARD 813

Query: 238 LGCIRNNET--SKVVELLHRMD 257
           +   ++N+   +    +LHR D
Sbjct: 814 IHQKKHNKNGGNNWQNILHRDD 835


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 129/253 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS + D  +  G+ PN   Y  LI+GFC  G+++ A  L   M + G   N + +NT+I+
Sbjct: 267 ASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMID 326

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYC+   V+++L +   M   GI   V TYNTL  GL   ++++ A  L   M    V  
Sbjct: 327 GYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRP 386

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              +Y T I   C  G +VEA  LFR +     E  +  Y+ ++DG  K G +  A    
Sbjct: 387 NHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFK 446

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + GL+P++ +Y  ++HG C +G++D A  LF +M+ +G  PN V +  L+ G  + 
Sbjct: 447 NEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKE 506

Query: 244 NETSKVVELLHRM 256
             + +  +L   M
Sbjct: 507 GRSEEAFQLYDNM 519



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 127/258 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D  + +L +M   G+ P    Y+ L+DG     +I +   +F  M       +V  Y+++
Sbjct: 195 DRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSV 254

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN YC+  +V  +  ++ E +  GI P   TY  L +G  +I Q+E A  L  +MQ   V
Sbjct: 255 INAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGV 314

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 +NT IDG C+   + +A E+   +  +  EL +  Y+ L  GL +  +++ A  
Sbjct: 315 GINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKN 374

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G+ PN V+Y  +I   CN+G M +A  LF +M   G  P+ VT+N +M G I
Sbjct: 375 LLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYI 434

Query: 242 RNNETSKVVELLHRMDER 259
           +     +     + M+++
Sbjct: 435 KKGSIREAERFKNEMEKK 452



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 1/249 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L+  M  RGV  N  V++T+IDG+C    +D+A E+ + M+  G   +V TYNT
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G  +   ++E+ NL   M+ KG+RP  V+Y TL         +  A +LF EM  + 
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  +DG  K G I EA      +        I +Y+ L+ G C  GK++ A 
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ + + G  PN+V Y  +I G   +G+ ++A  L+ +M   G+ P+   ++ L +G 
Sbjct: 479 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSAL-VGS 537

Query: 241 IRNNETSKV 249
           +  ++   V
Sbjct: 538 LHTDKKQNV 546



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 2/235 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LLD M + GV+ NA  Y++L+D +    + DR  E+   M+  G    V TY  L++
Sbjct: 162 ARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G    +D+ +   ++ EM SK +   V  Y+++ +       V  A ++FDE   + +  
Sbjct: 222 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 281

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRT-LRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
              TY   I+G CK G + EAAE+  T ++V    +    ++ +IDG C+   ++ A E+
Sbjct: 282 NEHTYGALINGFCKIGQM-EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI 340

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              + ++G+  +V TYN +  G     +MD+A +L   M  KGV PN V++ TL+
Sbjct: 341 KMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLI 395



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 35/229 (15%)

Query: 24  STLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
           S ++DG+C +G +  AR+L   M  +G   N + YN+L++ Y + KD +    +   M +
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           +GI PTV TY  L                                   +DGL     I +
Sbjct: 207 EGIEPTVGTYTIL-----------------------------------VDGLSAARDITK 231

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
              +F  ++       +  YS +I+  C+ G +  A E+F      G+ PN  TY  +I+
Sbjct: 232 VEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALIN 291

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           GFC  GQM+ A  L  DM+ +GV  N + FNT++ G  R N   K +E+
Sbjct: 292 GFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI 340



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 49/97 (50%)

Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
           S ++DG CK G++  A +L   +PR G+  N + YN ++  +  +   D+  ++   ME 
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206

Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +G+ P   T+  L+ G     + +KV  +   M  +N
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 243


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 131/259 (50%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + EA  L   + + G+ P    Y+ LIDG+C  G+++ AR L   M   GC+ NV TY  
Sbjct: 1276 LKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 1335

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L+ G    + +  +   + EMLSKG++P    YNT       +  +  A +L + +    
Sbjct: 1336 LMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEG 1395

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            ++++T TYN  I GLCK G + +A EL   +     +     Y+CLI   C+ G L  A 
Sbjct: 1396 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 1455

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            ++F ++   GL+P+ VT+ ++IH +C  G +  A+  F  M  +GV PN +T+N L+   
Sbjct: 1456 KIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 1515

Query: 241  IRNNETSKVVELLHRMDER 259
             R   T       H M ER
Sbjct: 1516 CRMGRTQLASHHFHEMLER 1534



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 135/278 (48%), Gaps = 36/278 (12%)

Query: 11   MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI--NGCMHNVVTYNTLINGYCKT 68
            M++ G+ P+   Y+TL+D F   G  D+   L   M+   +GC+ N VTYN +I G  + 
Sbjct: 1110 MLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 1169

Query: 69   KDVEESLNLYS----------------------------------EMLSKGIRPTVVTYN 94
             D+EE+  L                                    EM ++GI PTVVTYN
Sbjct: 1170 GDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 1229

Query: 95   TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
             + HGL +   VE A   F EM+   +  +  TYN+ ++G CK G + EA  LF  LR  
Sbjct: 1230 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 1289

Query: 155  KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                 +  Y+ LIDG C++G LE A  L + +   G +PNV TY I++ G  N   +  A
Sbjct: 1290 GLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMA 1349

Query: 215  HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
             + F +M +KG+ P+C  +NT +   +   + ++  EL
Sbjct: 1350 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFEL 1387



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 8/240 (3%)

Query: 4    ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
            A    D M+ +G++P+ F Y+T I    + G+I RA EL   + + G   + VTYN LI+
Sbjct: 1349 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIH 1408

Query: 64   GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            G CKT +++++  L  +M+S G++P  +TY  L H   E   +  A K+F+ M    +  
Sbjct: 1409 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 1468

Query: 124  ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETA 179
               T+   I   C+ G +  A   FR +     E G+E     Y+ LI  LC++G+ + A
Sbjct: 1469 SAVTFTVIIHAYCRRGNLYSAYGWFRKM----LEEGVEPNEITYNVLIHALCRMGRTQLA 1524

Query: 180  WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
               F  +   GL+ N  TY ++I G C  G  + A   + +M   G+ P+ +T   L+ G
Sbjct: 1525 SHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKG 1584



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 50/279 (17%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            ++EA+ L++ M +   + ++F Y+ LI G    G + +  +L + M+  G M  VVTYN 
Sbjct: 1172 LEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNA 1230

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +I+G  ++  VE +   ++EM + G+ P V+TYN+L +G  +   ++ AL LF +++ + 
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-------YSCLIDGLCKI 173
            +A    TYN  IDG C+ G + EA       R+LK E+G +        Y+ L+ G   +
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEA-------RILKEEMGEQGCLPNVCTYTILMKGSLNV 1343

Query: 174  GKLETAWELFQSLPRVGLMP-----------------------------------NVVTY 198
              L  A E F  +   GL P                                   + VTY
Sbjct: 1344 RSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTY 1403

Query: 199  NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            NI+IHG C  G +  A +L + M + G+ P+C+T+  L+
Sbjct: 1404 NILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLI 1442



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 10/212 (4%)

Query: 4    ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
            A  L ++++  G+  +   Y+ LI G C TG +  A+EL + M  NG   + +TY  LI+
Sbjct: 1384 AFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIH 1443

Query: 64   GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             +C+   + E+  +++ M+S G+ P+ VT+  + H       +  A   F +M    V  
Sbjct: 1444 AHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEP 1503

Query: 124  ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETA 179
               TYN  I  LC+ G    A+  F  +     E G+ A    Y+ LIDG CK+G  E A
Sbjct: 1504 NEITYNVLIHALCRMGRTQLASHHFHEM----LERGLVANKYTYTLLIDGNCKVGNWEDA 1559

Query: 180  WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
               +  + + G+ P+ +T+  ++ GF  DG +
Sbjct: 1560 MRFYFEMHQNGIHPDYLTHKALLKGF--DGHV 1589



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 3/212 (1%)

Query: 50   GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR--PTVVTYNTLFHGLFEIHQVE 107
            G   ++VTYNTL++ + K    ++   L  EM ++G    P  VTYN +  GL     +E
Sbjct: 1114 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 1173

Query: 108  HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
             A +L + M+ S  A+ + TYN  I GL   G + +  +L   +        +  Y+ +I
Sbjct: 1174 EAAELVEGMRLSKKAS-SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMI 1232

Query: 168  DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
             GL + G +E A   F  +  +GL+P+V+TYN +++G+C  G + +A  LF D+   G+A
Sbjct: 1233 HGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLA 1292

Query: 228  PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            P  +T+N L+ G  R  +  +   L   M E+
Sbjct: 1293 PTVLTYNILIDGYCRLGDLEEARILKEEMGEQ 1324



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + +A  L   M+  G++P+   Y+ LI   C  G +  AR++F +M  +G + + VT+  
Sbjct: 1416 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 1475

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +I+ YC+  ++  +   + +ML +G+ P  +TYN L H L  + + + A   F EM    
Sbjct: 1476 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 1535

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELF 148
            + A   TY   IDG CK G   +A   +
Sbjct: 1536 LVANKYTYTLLIDGNCKVGNWEDAMRFY 1563



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 44/217 (20%)

Query: 66   CKTKDVEES------LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            CK +D          L+ + EM S G+ P V   N +   L +  + +    + +EM   
Sbjct: 1054 CKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLEL 1113

Query: 120  DVAAETSTYNTFID-------------------------------------GLCKNGYIV 142
             +     TYNT +D                                     GL + G + 
Sbjct: 1114 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 1173

Query: 143  EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
            EAAEL   +R+ K       Y+ LI GL   G ++  ++L   +   G+MP VVTYN MI
Sbjct: 1174 EAAELVEGMRLSKKASSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMI 1232

Query: 203  HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            HG    G ++ A   F +M A G+ P+ +T+N+L+ G
Sbjct: 1233 HGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG 1269



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            + EA ++ + MI  G+ P+A  ++ +I  +C  G +  A   F  M   G   N +TYN 
Sbjct: 1451 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 1510

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LI+  C+    + + + + EML +G+     TY  L  G  ++   E A++ + EM  + 
Sbjct: 1511 LIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG 1570

Query: 121  VAAETSTYNTFIDGL 135
            +  +  T+   + G 
Sbjct: 1571 IHPDYLTHKALLKGF 1585



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 189  VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA--PNCVTFNTLMLGCIRNNET 246
            +G+ P++VTYN ++  F  +G+ DK   L  +ME +G    PN VT+N ++ G  R  + 
Sbjct: 1113 LGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDL 1172

Query: 247  SKVVELLHRM 256
             +  EL+  M
Sbjct: 1173 EEAAELVEGM 1182


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 35/291 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LLD M   G++PN  VY+TL+DGF   G+   A ++   M   G   N + Y+ 
Sbjct: 331 LKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDN 390

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK   +  +  L +EM+  G RP   TY+ L  G F+ +  + A +L +EM++S 
Sbjct: 391 LIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSG 450

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL------------------------RVLKC 156
           +     TY   I+GLC+NG   EA  L   +                          L C
Sbjct: 451 ILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLAC 510

Query: 157 E-----------LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           E             +  Y+ LI GL  +G++E A E +  + + GL+P+  TY+ +IHG+
Sbjct: 511 ESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 570

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           C    ++KA  L   M   G+ PN  T+  L+ G  ++N+  KV  +L  M
Sbjct: 571 CKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA      + +RG+ P+ F YS LI G+C T  +++A +L   M  +G   N  TY  
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GY K+ D E+  ++   ML  G +P    Y  +   L     +E A  +  E++ + 
Sbjct: 601 LLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 660

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y++ I GLCK   + +A  L   +     E GI  Y+ LIDG C+ G +  A 
Sbjct: 661 LVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 720

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F S+   GL+PN VTY  +I G C +G +  A DL+ DM  +G+AP+   +N L  GC
Sbjct: 721 NVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGC 780

Query: 241 IRNNETSKVVELLHRMDER 259
               +  + + L   M  R
Sbjct: 781 SDAADLEQALFLTEEMFNR 799



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 126/256 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+   +L   M   G+ P+ + YST ++  C   + D A+++F  M    C  N VTYN 
Sbjct: 226 MELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNV 285

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C++  VEE+     EM+  G+ P   TY  L +GL +  +++ A  L DEM  S 
Sbjct: 286 MISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSG 345

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +      Y T +DG  K G   EA ++   +     +     Y  LI GLCKIG+L  A 
Sbjct: 346 LKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRAS 405

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L   + +VG  P+  TY+ ++ G       D A +L  +M   G+ PN  T+  ++ G 
Sbjct: 406 KLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGL 465

Query: 241 IRNNETSKVVELLHRM 256
            +N E+ +   LL  M
Sbjct: 466 CQNGESKEAGNLLEEM 481



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 121/253 (47%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A++++ +M   G+ P     + L+        ++   +L   M+  G   +V TY+T + 
Sbjct: 194 AAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLE 253

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
            +CK +D + +  ++ EM  +      VTYN +  GL     VE A    +EM    ++ 
Sbjct: 254 AHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSP 313

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TY   ++GLCK G + EA  L   +     +  +  Y+ L+DG  K GK   A+++ 
Sbjct: 314 DAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDIL 373

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             +   G+ PN + Y+ +I G C  GQ+ +A  L  +M   G  P+  T++ LM G  ++
Sbjct: 374 NEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQH 433

Query: 244 NETSKVVELLHRM 256
            +     ELL+ M
Sbjct: 434 YDKDGAFELLNEM 446



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 36/224 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  LLD M + G+ P    Y+ LIDGFC +G+I RAR +F S+   G + N VTY  
Sbjct: 681 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTA 740

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK  D+ ++ +LY +ML +GI P    YN L  G  +   +E AL L +EM    
Sbjct: 741 LIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM---- 796

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  +N         GY                   +  +S L+ G CK G+L+   
Sbjct: 797 -------FN--------RGYA-----------------HVSLFSTLVRGFCKRGRLQETE 824

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
           +L   +    ++PN  T   +I  F   G++ +AH +F +++ K
Sbjct: 825 KLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQK 868



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 109/235 (46%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
           V   L+D +   G +  A ++ + M   G        N L+    +   +E    L   M
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
              GI P V TY+T      +    + A K+F+EM+  D A    TYN  I GLC++G +
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
            EA      +           Y  L++GLCK G+L+ A  L   +   GL PNVV Y  +
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           + GF  +G+  +A D+  +M + GV PN + ++ L+ G  +  +  +  +LL+ M
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 114/255 (44%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  LL+ M   G+ PNA+ Y  +I+G C  GE   A  L   M   G   N   Y  L
Sbjct: 437 DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 496

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+ K   +  +      M    + P +  YN+L  GL  + ++E A + + ++Q   +
Sbjct: 497 IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGL 556

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY+  I G CK   + +A +L + +     +   + Y+ L++G  K    E    
Sbjct: 557 VPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSS 616

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           + QS+   G  P+   Y I+I        M+ A  +  ++E  G+ P+   +++L+ G  
Sbjct: 617 ILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC 676

Query: 242 RNNETSKVVELLHRM 256
           +  +  K V LL  M
Sbjct: 677 KMADMEKAVGLLDEM 691



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 1/155 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  + D ++ +G+ PN   Y+ LIDG C  G+I  A +L+  M   G   +   YN 
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G     D+E++L L  EM ++G    V  ++TL  G  +  +++   KL   M   +
Sbjct: 776 LATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDRE 834

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           +     T    I    K G + EA  +F  L+  K
Sbjct: 835 IVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKK 869



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+ RG+ P+AFVY+ L  G     ++++A  L   M   G  H V  ++TL+ G+CK   
Sbjct: 761 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAH-VSLFSTLVRGFCKRGR 819

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
           ++E+  L   M+ + I P   T   +     +  ++  A ++F E+Q    A+++ST
Sbjct: 820 LQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKK-ASQSST 875


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 124/247 (50%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
            M++  VRP    +S +IDG C TG++D A  LF  M   GC  NV+ YN LI+    + 
Sbjct: 407 FMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSN 466

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            +EE   L  EM   G RPT  T+N++F  L     V  AL +  EM+          Y 
Sbjct: 467 RLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYT 526

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             +  LCK     EA      +        I AYS  IDG  KI  ++ A E+F+ +   
Sbjct: 527 LLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICAR 586

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G  P+VV YN +I+GFC   ++ +AHD+  +M AKG+ P+ VT+N L+ G  +N +  + 
Sbjct: 587 GYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQA 646

Query: 250 VELLHRM 256
              L RM
Sbjct: 647 FHCLSRM 653



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 8/263 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFC----LTGEIDRARELFVSMDINGCMHNVV 56
           ++E   LL  M   G RP  F ++++    C    +TG +D  RE    M ++G    + 
Sbjct: 468 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVRE----MRVHGHEPWIK 523

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            Y  L+   CK K   E+ N  +EM+ +G  P +V Y+    G  +I  V+ AL++F ++
Sbjct: 524 HYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDI 583

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
                  +   YNT I+G CK   + EA ++   +        +  Y+ LIDG CK G +
Sbjct: 584 CARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDI 643

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A+     +      PNV+TY  +I G CN G+ D A  L+ +M  KG +PN ++F  L
Sbjct: 644 DQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIAL 703

Query: 237 MLGCIRNNETSKVVELLHRMDER 259
           + G  +       +     M ER
Sbjct: 704 IHGLCKCGWPDAALLYFREMGER 726



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 26/276 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L++ M   G+R N   +  LI GF     +D+A +LF  M  +G   +V  Y+ 
Sbjct: 244 VDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDA 303

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C  K++E++L+L SEM   GI P +   + L     E  +V+    + + ++  D
Sbjct: 304 LIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSE--EVDIYRLIEERLEDLD 361

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAA-------------------ELFRTLRVLKCELGIE 161
             A    YN+ ++GL  NG  V+ A                   + F    +++      
Sbjct: 362 TEAMLLLYNSVLNGLV-NGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPX--TT 418

Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
           ++S +IDGLC  GKL+ A  LF+ + RVG   NV+ YN +I    N  ++++ + L  +M
Sbjct: 419 SFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM 478

Query: 222 EAKGVAPNCVTFNTLMLGCI-RNNETSKVVELLHRM 256
           +  G  P   T N++  GC+ R  + +  ++++  M
Sbjct: 479 KGSGFRPTQFTHNSI-FGCLCRREDVTGALDMVREM 513



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 16/252 (6%)

Query: 21  FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHN----------------VVTYNTLING 64
            +Y+++++G      +D+A  L  +M  +    N                  +++ +I+G
Sbjct: 367 LLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDG 426

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
            C T  ++ +L+L+ +M+  G +  V+ YN L   L   +++E    L  EM+ S     
Sbjct: 427 LCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPT 486

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             T+N+    LC+   +  A ++ R +RV   E  I+ Y+ L+  LCK  +   A     
Sbjct: 487 QFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLA 546

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            + R G +P++V Y+  I GF     +D+A ++F D+ A+G  P+ V +NTL+ G  +  
Sbjct: 547 EMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVK 606

Query: 245 ETSKVVELLHRM 256
             S+  ++L  M
Sbjct: 607 RVSEAHDILDEM 618



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 123/302 (40%), Gaps = 58/302 (19%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L  M   G  P+ +  ++++  +C + + D+A  +F  +   G +   V  + L+  + K
Sbjct: 182 LKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHV-LSILVLTFSK 240

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             +V+++  L   M   GIR    T+  L HG     +V+ AL+LF +MQ S  A + S 
Sbjct: 241 CGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSV 300

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA------------------------- 162
           Y+  I GLC    I +A  L   ++    ELGI+                          
Sbjct: 301 YDALIGGLCAKKEIEKALHLLSEMK----ELGIDPDIQILSKLIPYCSEEVDIYRLIEER 356

Query: 163 ------------YSCLIDGLCKIGKLETAWELFQSLP----------------RVGLMPN 194
                       Y+ +++GL     ++ A+ L  ++                 +  + P 
Sbjct: 357 LEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPX 416

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
             +++I+I G CN G++D A  LF DM   G   N + +N L+     +N   +   LL 
Sbjct: 417 TTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLK 476

Query: 255 RM 256
            M
Sbjct: 477 EM 478



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 4/156 (2%)

Query: 103 IHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA 162
           I  VE  LK   EM  S    +  T  + +   C +    +A  +F  +       G   
Sbjct: 175 IDLVEMRLK---EMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDG-HV 230

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
            S L+    K G+++ A+EL + +  +G+  N  T+ ++IHGF    ++DKA  LF  M+
Sbjct: 231 LSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQ 290

Query: 223 AKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             G AP+   ++ L+ G     E  K + LL  M E
Sbjct: 291 KSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKE 326



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 1/116 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   L  M+ +   PN   Y+TLIDG C  G  D A  L+  M   GC  N +++  
Sbjct: 643 IDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIA 702

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           LI+G CK    + +L  + EM  +   P  + Y  L            A ++  EM
Sbjct: 703 LIHGLCKCGWPDAALLYFREMGERET-PDTIVYVALITSFISNKNPTLAFEILKEM 757


>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
          Length = 648

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 131/232 (56%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G+ P+   Y+TLIDGF   GE+D+A ELF  M       +VVTYN+LI+G CKTK+
Sbjct: 55  LLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKE 114

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + +S  +  +M+  GIRP   TYN+L +G       + ++++F EM  S +       N+
Sbjct: 115 MVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNS 174

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           FI  LC++  I EA ++F ++ +   +  I +YS L+ G    G       L   +   G
Sbjct: 175 FIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKG 234

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           ++PN   +NI+I+ +   G MDKA  +F DM+ KG+ P+ VTF T++    R
Sbjct: 235 IVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 286



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 31/289 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM---DINGCMHNVVT 57
           +D+A    + M+  GV P+  VY  LI G C  GE+ +A+EL   M   DI      V  
Sbjct: 290 LDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPP--PGVKY 347

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL------- 110
           ++++IN   K   V E  ++   M+  G RP VVT+N+L  G   +  +E AL       
Sbjct: 348 FSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWH 407

Query: 111 -------------------KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
                              K+F EM  S       TY   + GLC+N    EA  L   L
Sbjct: 408 QLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKL 467

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
             +  +  I  ++ +I  + K+G+ + A ELF ++   GL+P V TYN+MI     +   
Sbjct: 468 FAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESY 527

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           ++A +LF+ +E  G AP+    N ++   ++  E +K    L  +DE N
Sbjct: 528 EEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENN 576



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 121/256 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   MI++ V P+   Y++LIDG C T E+ ++  +   M   G   N  TYN+
Sbjct: 80  VDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNS 139

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI GY      +ES+ ++ EM S G+ P VV  N+  H L   ++++ A  +FD M    
Sbjct: 140 LIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKG 199

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +Y+T + G    G       L   +           ++ LI+   + G ++ A 
Sbjct: 200 PKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAM 259

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +   G++P+ VT+  +I   C  G++D A   F  M   GV P+   +  L+ GC
Sbjct: 260 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGC 319

Query: 241 IRNNETSKVVELLHRM 256
             + E  K  EL+  M
Sbjct: 320 CNHGELVKAKELISEM 335



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 27/283 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + D M+ +G +PN   YSTL+ G+   G       L   M   G + N   +N 
Sbjct: 185 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 244

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN Y +   +++++ ++ +M +KG+ P  VT+ T+   L  I +++ AL  F+ M    
Sbjct: 245 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 304

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC-ELGIEAYSCLIDGLCKIGKLETA 179
           V    + Y   I G C +G +V+A EL   +        G++ +S +I+ L K G++   
Sbjct: 305 VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEG 364

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK-------------------------- 213
            ++   + + G  PNVVT+N ++ G+C  G M++                          
Sbjct: 365 KDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTA 424

Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           A  +F +M   G   +  T+  ++ G  RNN T +   LL ++
Sbjct: 425 AKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKL 467



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 89/168 (52%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E +L ++  +L  G+ P V +YNTL  G  +  +V+ A +LF +M    V+ +  TYN+ 
Sbjct: 46  ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 105

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDGLCK   +V++  +   +         + Y+ LI G    G  + +  +F+ +   GL
Sbjct: 106 IDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 165

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +P VV  N  IH  C   ++ +A D+F  M  KG  PN ++++TL+ G
Sbjct: 166 IPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHG 213



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%)

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           E AL +F  +  + +  +  +YNT IDG  K G + +A ELF  +        +  Y+ L
Sbjct: 46  ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 105

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           IDGLCK  ++  +  + + +   G+ PN  TYN +I+G+   G   ++  +F +M + G+
Sbjct: 106 IDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 165

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            P  V  N+ +    R+N   +  ++   M
Sbjct: 166 IPCVVNCNSFIHALCRHNRIKEAKDIFDSM 195



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 57/126 (45%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA+ LL+ +    V+ +   ++ +I      G    A+ELF ++   G +  V TYN +
Sbjct: 458 DEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLM 517

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+   K +  EE+ NL+  +   G  P     N +   L +  +V  A      +  +++
Sbjct: 518 ISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNL 577

Query: 122 AAETST 127
             E ST
Sbjct: 578 TLEAST 583


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 133/263 (50%), Gaps = 3/263 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +     ++R V P+ + ++T+I G C  G++ +A ++   +   G   +V TYN+
Sbjct: 172 VDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNS 231

Query: 61  LINGYCKTKDVEESLN---LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           LI+GYCK        +   L  EM+  GI PT VT+  L +G  +      A+++F+EM+
Sbjct: 232 LIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMK 291

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +AA   TYN+ I GLC  G + E  +L   +  L        + C++ G CK G + 
Sbjct: 292 QQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA 351

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +    +    + P+VV YNI+I  +   G+M+ A  +   M  KG++PN  T+N L+
Sbjct: 352 DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  R+ +      LL  M E+ 
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKG 434



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 127/247 (51%), Gaps = 3/247 (1%)

Query: 15  GVRPNAFVYSTLIDGFCL---TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           G+ P+   Y++LIDG+C     G +     L   M   G     VT+  LINGYCK  + 
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
             ++ ++ EM  +GI  +VVTYN+L  GL    +VE  +KL +EM+   ++    T+   
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           + G CK G + +A +    +     E  +  Y+ LID   ++GK+E A  + +++ + G+
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGI 400

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PNV TYN +I GF   G    A  L  +M+ KG+  + VT+N L+       E  K V+
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 252 LLHRMDE 258
           LL  M E
Sbjct: 461 LLDEMSE 467



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 124/249 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L++ M   G+ PN   +  ++ GFC  G +  A +    M       +VV YN 
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y +   +E+++ +   M  KGI P V TYN L  G         A  L DEM+   
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TYN  I  LC  G + +A +L   +  +  E     Y+ +I G C  G +++A+
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + +     NVVTYN+ I  FC  G+MD+A+DL  +M  K + PN +T+ T+  G 
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554

Query: 241 IRNNETSKV 249
           +    T  +
Sbjct: 555 MEKGYTPDI 563



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 118/252 (46%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M++ G+ P A  +  LI+G+C       A  +F  M   G   +VVTYN+LI+G C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               VEE + L  EM   G+ P  +T+  +  G  +   +  A    D M   +V  +  
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YN  ID   + G + +A  +   +        +  Y+CLI G  + G   +A  L   +
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+  +VVTYN++I   C  G++ KA  L  +M   G+ PN +T+NT++ G       
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNI 490

Query: 247 SKVVELLHRMDE 258
               E+  RM++
Sbjct: 491 KSAYEIRTRMEK 502



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 9/210 (4%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           + N L+ G    K V+ +   +   L + + P + T+NT+  GL  I Q+  A  +  ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK--CELGIEA----YSCLIDGL 170
           +   +A   +TYN+ IDG CK G    A  ++    +LK   E GI      +  LI+G 
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK      A  +F+ + + G+  +VVTYN +I G C++G++++   L  +ME  G++PN 
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +TF  ++ G  +    +   + +  M ERN
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERN 364



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 3/175 (1%)

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           RP+  + N L  GL    +V+ A K F       V+ +  T+NT I GLC+ G + +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE---LFQSLPRVGLMPNVVTYNIMIH 203
           + + ++       +  Y+ LIDG CK G     +    L + +   G+ P  VT+ ++I+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G+C +     A  +F +M+ +G+A + VT+N+L+ G     +  + V+L+  M++
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 8/169 (4%)

Query: 100 LFEIHQVEHALKLFDEM-----QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           +  + +    L+ +D        H      TS+ N  + GL     +  A + FR+    
Sbjct: 126 VLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR 185

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           +    I  ++ +I GLC+IG+L  A ++ + +   GL P+V TYN +I G+C  G     
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245

Query: 215 H--DLFL-DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +  D+ L +M   G++P  VTF  L+ G  +N+ T+  V +   M ++ 
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294


>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 140/252 (55%), Gaps = 1/252 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EAS LL  MI R + P+ F YS L  G C++G +++A  +   +     + +  TYN 
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNI 432

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN   +++++  +  L S M+  GI+P +VTY T   G  +  ++E A++++D+   +D
Sbjct: 433 LINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKAD 492

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
             +    YN+ +DGLCK G I  A  L   L+     L    Y+ L+ G C  G++E A+
Sbjct: 493 GKSNLVVYNSILDGLCKQGSIYAAKLLVDKLQ-QNGFLDPVTYNTLLHGFCVNGEIEKAF 551

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF  +  VG + N+V+YNIMIH  C  G + +A +L   M ++G+ P+ +T+ TL+   
Sbjct: 552 ALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNF 611

Query: 241 IRNNETSKVVEL 252
           +    +  V+EL
Sbjct: 612 VEICGSKDVIEL 623



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 133/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL D M++  + P+ FVY++LI    + GE++ A  L   M     + +  TY+ 
Sbjct: 338 LDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSI 397

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L  G C +  + ++L ++  ++ + +     TYN L + +F+   +  A +L   M    
Sbjct: 398 LTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGG 457

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T +DG CK G I  A +++        +  +  Y+ ++DGLCK G +  A 
Sbjct: 458 IKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAK 517

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   L + G + + VTYN ++HGFC +G+++KA  LFL+M   G   N V++N ++   
Sbjct: 518 LLVDKLQQNGFL-DPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFL 576

Query: 241 IRNNETSKVVELLHRMDER 259
            +     + +EL+  M  +
Sbjct: 577 CKMGLIQQAMELMRAMSSQ 595



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 9/259 (3%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI---NGCMHNVVTYN 59
           EA  ++ LM++  + PN   ++ +ID     GE+D A +L  + ++        N+V YN
Sbjct: 232 EAIYVVYLMLKIEIWPNVVTFNMIIDKANKMGEMDLALKLTRNTEVISGGSVSPNIVAYN 291

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +ING+CK + +E + N+  EM+  GI     TY TL  G      ++ A +L DEM   
Sbjct: 292 CIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEM 351

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDGLCKIGKL 176
            +  +T  YN+ I  L   G + EA+ L   +   R+L  E     YS L  GLC  G L
Sbjct: 352 RLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEF---TYSILTKGLCVSGHL 408

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             A  +   +    L+ +  TYNI+I+       +  A  L   M   G+ P+ VT+ T 
Sbjct: 409 NKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTP 468

Query: 237 MLGCIRNNETSKVVELLHR 255
           + G  +  +    V++  +
Sbjct: 469 VDGHCKEGKIEAAVQIYDK 487



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L  MI+ G+  N   Y+TLIDG+   G +D A  L   M     + +   YN+
Sbjct: 303 LESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNS 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI       ++EE+  L S+M+++ I P   TY+ L  GL     +  AL++   +    
Sbjct: 363 LIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERS 422

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYN  I+ + ++  I  A +L  ++ V   +  +  Y   +DG CK GK+E A 
Sbjct: 423 LVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAV 482

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +++    +     N+V YN ++ G C  G +  A  L   ++  G   + VT+NTL+ G 
Sbjct: 483 QIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKLLVDKLQQNGFL-DPVTYNTLLHGF 541

Query: 241 IRNNETSKVVELLHRM 256
             N E  K   L   M
Sbjct: 542 CVNGEIEKAFALFLEM 557



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 3/230 (1%)

Query: 34  GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
           GE D+   ++  M  +G   NV T+N +I   C    + E++ +   ML   I P VVT+
Sbjct: 193 GETDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTF 252

Query: 94  NTLFHGLFEIHQVEHALKLF---DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
           N +     ++ +++ ALKL    + +    V+     YN  I+G CK   +  A  +   
Sbjct: 253 NMIIDKANKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGE 312

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
           +  L        Y+ LIDG  + G L+ A+ L   +  + L+P+   YN +I+    +G+
Sbjct: 313 MIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGE 372

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +++A  L  DM  + + P+  T++ L  G   +   +K + + + + ER+
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERS 422



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 73/130 (56%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A++LL   +Q+    +   Y+TL+ GFC+ GEI++A  LF+ M   G + N+V+YN +I+
Sbjct: 515 AAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIH 574

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             CK   +++++ L   M S+GI P ++TY TL     EI   +  ++L D M       
Sbjct: 575 FLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAVP 634

Query: 124 ETSTYNTFID 133
           +  TY +F+ 
Sbjct: 635 DRKTYRSFVS 644



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 98/211 (46%), Gaps = 3/211 (1%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           C  N   +   +    + + VE + ++  ++  +G   T+  +N   + L ++ + +   
Sbjct: 140 CNSNPAVFXARVRTCTQLRSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFX 199

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
            ++ EM  S  +   +T+N  I  LC    ++EA  +   +  ++    +  ++ +ID  
Sbjct: 200 NMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTFNMIIDKA 259

Query: 171 CKIGKLETAWELFQSLPRV---GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            K+G+++ A +L ++   +    + PN+V YN +I+GFC   +++ A ++  +M   G+ 
Sbjct: 260 NKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIY 319

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            N  T+ TL+ G  R         L   M E
Sbjct: 320 FNERTYATLIDGYARKGSLDVAFRLCDEMVE 350



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 6/107 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   MI  G   N   Y+ +I   C  G I +A EL  +M   G + +++TY T
Sbjct: 547 IEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTT 606

Query: 61  LINGY---CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
           LI  +   C +KDV E   L+  M+ KG  P   TY +      + H
Sbjct: 607 LITNFVEICGSKDVIE---LHDYMVLKGAVPDRKTYRSFVSPCLQEH 650


>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 369

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 137/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE + + +LM + G   ++  Y  L+ GFC  G I+++  +  + +  G + +   Y+ 
Sbjct: 75  VDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK   +E+++++ + M+  G +P    YN L +GL    + E A+++F EM  + 
Sbjct: 135 MINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYN  I+GLCK+    EA +L + +        +  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  + + G  P+V  +N +IHG C+ G+   A  L+LDM     APN VT NTLM G 
Sbjct: 255 QLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDMRNALVIWARI 330



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 123/220 (55%), Gaps = 1/220 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  +L+ MI+ G +PN  VY+ LI+G     + + A  +F  M I  C   +VTYN 
Sbjct: 145 LEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITHCSPTIVTYNI 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK++   E+ +L  EML KG+ P+V+TY+ L  GL   H++E AL+L++++  + 
Sbjct: 205 LINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVTKNG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +NT I GLC  G    A  L+  +    C   +   + L++G  K G +  A 
Sbjct: 265 FKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
            ++  + +  L P++++YNI + G C+  ++  A  LFL+
Sbjct: 325 VIWARILKNELQPDIISYNITLKGLCSCNRISDAI-LFLN 363



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 126/254 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++ R+L+   ++G   +AF YS +I+G C   ++++A  +   M  +GC  N   YN 
Sbjct: 110 INKSLRVLETAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNA 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM      PT+VTYN L +GL +  +   A  L  EM    
Sbjct: 170 LINGLIGASKSEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC    I  A +L+  +     +  ++ ++ LI GLC +GK + A 
Sbjct: 230 LTPSVITYSLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  +      PN+VT N ++ GF  DG M  A  ++  +    + P+ +++N  + G 
Sbjct: 290 SLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  L+
Sbjct: 350 CSCNRISDAILFLN 363



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 116/229 (50%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NG+ +   +++   L+  M  +G R +V
Sbjct: 1   CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+    +++ M+      ++ TY   + G CKNGYI ++  +  T
Sbjct: 60  ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK  KLE A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + A  +F +M     +P  VT+N L+ G  ++    +  +L+  M E+
Sbjct: 180 SEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEK 228



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 66/115 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +L + + + G +P+  +++TLI G C  G+   A  L++ M+   C  N+VT NT
Sbjct: 250 IEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNT 309

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
           L+ G+ K  D+  +L +++ +L   ++P +++YN    GL   +++  A+   ++
Sbjct: 310 LMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAILFLND 364


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 127/247 (51%), Gaps = 1/247 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTLINGYCKTKDVEE 73
           G+ P+ + Y+T+I G+C  G+++ A ++F  M   G +  N V YN LI GYC   ++E 
Sbjct: 178 GIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEV 237

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L    EM+ +G+  TV TYN   H LF   +   A  L +EM    +A +  TYN  I+
Sbjct: 238 ALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILIN 297

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G CK G   +A ++F  +        +  Y+ LI  L   G ++    LF    R G+ P
Sbjct: 298 GYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP 357

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           ++  YN +I+  C  G MD+A ++  +ME K + P+ VT+NTLM G        +   L+
Sbjct: 358 DLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLI 417

Query: 254 HRMDERN 260
             M +R 
Sbjct: 418 EEMTKRG 424



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 128/243 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L++ M ++G+ P+AF Y+ LI+G+C  G+  +A ++F  M   G    VVTY +LI
Sbjct: 272 EAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLI 331

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +       V+E+  L+++ + +GIRP +  YN L +       ++ A ++  EM+   + 
Sbjct: 332 HALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRIT 391

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYNT + GLC  G + EA  L   +     +  + +Y+ LI G    G ++ A ++
Sbjct: 392 PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKV 451

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P ++TYN MI G C +GQ   A DL  +M   G+ P+  T+ +L+ G   
Sbjct: 452 RDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTT 511

Query: 243 NNE 245
            +E
Sbjct: 512 EDE 514



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 136/292 (46%), Gaps = 36/292 (12%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGE-----------IDR---------- 38
           +++A+++ D M+  G V PNA +Y+ LI G+C  G            +DR          
Sbjct: 199 VEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYN 258

Query: 39  --------------ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSK 84
                         A  L   M   G   +  TYN LINGYCK    ++++ ++  M+ K
Sbjct: 259 LFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGK 318

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           GIR TVVTY +L H L     V+   +LF++     +  +   YN  I+  C  G +  A
Sbjct: 319 GIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRA 378

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
            E+   +   +       Y+ L+ GLC +G+L+ A  L + + + G+ P++V+YN +I G
Sbjct: 379 FEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISG 438

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +   G +  A  +  +M  KG  P  +T+N ++ G   N +     +L+  M
Sbjct: 439 YSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEM 490



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 107/218 (49%), Gaps = 8/218 (3%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           ++ ++   C  G+  RA EL   M       N VTYNT+I G+C    V+  + +  EM 
Sbjct: 119 FNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMREMR 174

Query: 83  SK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETSTYNTFIDGLCKNGY 140
            + GI P   TY T+  G  ++ +VE A K+FDEM     V      YN  I G C  G 
Sbjct: 175 ERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGN 234

Query: 141 IVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
           + E A  +R   V +   + +  Y+  +  L   G+   A  L + +   GL P+  TYN
Sbjct: 235 L-EVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYN 293

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           I+I+G+C +G+  KA  +F  M  KG+    VT+ +L+
Sbjct: 294 ILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLI 331



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 77/135 (57%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  ++  M ++ + P+   Y+TL+ G CL G +D AR L   M   G   ++V+YNT
Sbjct: 375 MDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNT 434

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY    D+++++ +  EM+ KG  PT++TYN +  GL    Q   A  L  EM  + 
Sbjct: 435 LISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNG 494

Query: 121 VAAETSTYNTFIDGL 135
           +  + STY + I+GL
Sbjct: 495 ITPDDSTYISLIEGL 509



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 9/149 (6%)

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           +L L+  ++   +   T++ +  +  L      V  A++FR    L+  L    ++ ++ 
Sbjct: 69  SLSLYSRLKSLSLPIPTASLHPLLSSLPPAPAFVLFADIFR----LRLPLSTTTFNIMLR 124

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVA 227
            LC  GK   A EL + +P     PN VTYN +I GFC  G++    ++  +M E  G+A
Sbjct: 125 HLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIA 180

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           P+  T+ T++ G  +  +     ++   M
Sbjct: 181 PDKYTYATVISGWCKVGKVEDATKVFDEM 209


>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 123/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+  +R +D +I  G+  N + Y+ +ID  C    +DRA E+F  +   G   N+VTYNT
Sbjct: 446 MEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNT 505

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+  +++++  L   +L    RP + T+N+L  GL + H+ E+A   F EM   D
Sbjct: 506 LIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWD 565

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  I   C  G +  +  L R +++   +    +++ LI G     + + A 
Sbjct: 566 VPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAE 625

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +LF S+ R+G+ P+  TY  +I   C  G+ DKA ++FL M+  G  P+  T
Sbjct: 626 KLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYT 677



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 26/267 (9%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+ F Y+ LI G C  G +D A  L   M+  G   NV TY  LI+G+   K   E+  +
Sbjct: 262 PDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKV 321

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE-------------------MQH 118
              M  + + P   T  +L HG+F     + A +L  E                   + +
Sbjct: 322 LQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSN 381

Query: 119 SDVAAE-------TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           + +A+E       +ST+N  +  + K   +     +F        + G   Y  LI+ L 
Sbjct: 382 NSMASEAVMFXPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALY 441

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K GK+E        L   GL+ N+ +YN++I   C    MD+A ++F D+  +G++PN V
Sbjct: 442 KAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIV 501

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDE 258
           T+NTL+ G  RN    K  ELL  + E
Sbjct: 502 TYNTLIGGFCRNGNMDKAQELLEMLLE 528



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 35/250 (14%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + D  +Q GV+P    Y TLI+     G+++        +  +G + N+ +YN +I+  C
Sbjct: 417 VFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLC 476

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K K ++ +    SEM                               F ++ +  ++    
Sbjct: 477 KGKSMDRA----SEM-------------------------------FRDLHNRGISPNIV 501

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT I G C+NG + +A EL   L   +    I  ++ LIDGLC+  K E A+  F  +
Sbjct: 502 TYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEM 561

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
               + PNV+TYNI+I  FC  G + ++  L   M+  G+ P+  +FN L+ G    N  
Sbjct: 562 VEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRF 621

Query: 247 SKVVELLHRM 256
            K  +L   M
Sbjct: 622 QKAEKLFDSM 631



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 26/280 (9%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------DIN 49
           E  ++L  M +R V PN     +L+ G       D+A EL +               +I 
Sbjct: 317 ETFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNIL 376

Query: 50  GCMHN-------------VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
            C+ N               T+N  +    K  D++ +  ++   +  G++P   TY TL
Sbjct: 377 YCLSNNSMASEAVMFXPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTL 436

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
              L++  ++E   +  D + +  + +   +YN  ID LCK   +  A+E+FR L     
Sbjct: 437 IEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGI 496

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
              I  Y+ LI G C+ G ++ A EL + L      P++ T+N +I G C   + + A  
Sbjct: 497 SPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFG 556

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            F +M    V PN +T+N L+       + S+   LL +M
Sbjct: 557 CFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQM 596



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 26/265 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA RL+  M   G  PN F Y+ LIDGF          ++  +M     + N  T  +
Sbjct: 280 VDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRS 339

Query: 61  LINGYCKTKDVEESLNLYSEMLSK--GI------------------------RPTVVTYN 94
           L++G  +    +++  L  E + +  GI                         P+  T+N
Sbjct: 340 LVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFN 399

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
                + +   ++    +FD    S V    STY T I+ L K G +         L   
Sbjct: 400 ITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLIND 459

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                I +Y+ +ID LCK   ++ A E+F+ L   G+ PN+VTYN +I GFC +G MDKA
Sbjct: 460 GLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKA 519

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLG 239
            +L   +      P+  TFN+L+ G
Sbjct: 520 QELLEMLLESRFRPDIFTFNSLIDG 544



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%)

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           + V  S++L  ++   G++ T      LF     +    + +++F ++    +   T  Y
Sbjct: 173 RPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLY 232

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  +D L K+  +  A   F+ +    C      Y+ LI G+C++G ++ A  L + +  
Sbjct: 233 NAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEG 292

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G  PNV TY I+I GF N  +  +   +   M+ + V PN  T  +L+ G  R     K
Sbjct: 293 LGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDK 352

Query: 249 VVELLHRMDER 259
             ELL    ER
Sbjct: 353 AFELLLEFVER 363



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++  V PN   Y+ LI  FC  G++ R+  L   M ++G   +  ++N LI GY     
Sbjct: 561 MVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNR 620

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +++  L+  ML  GI+P   TY  L   L +  + + A ++F  M+ +    ++ T + 
Sbjct: 621 FQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSL 680

Query: 131 FIDGL 135
           F D L
Sbjct: 681 FSDTL 685



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 56/115 (48%)

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           E+F  + +L        Y+ ++D L K   L+ A+  FQ +     +P+  TYNI+IHG 
Sbjct: 215 EVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGV 274

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C  G +D+A  L   ME  G  PN  T+  L+ G        +  ++L  M ERN
Sbjct: 275 CRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERN 329



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 3/115 (2%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           E+F  + + G       YN +++   K+  ++ +   + +M S    P   TYN L HG+
Sbjct: 215 EVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGV 274

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
             +  V+ AL+L  +M+         TY   IDG         A E F+ L+ +K
Sbjct: 275 CRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAK---RAGETFKVLQTMK 326


>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 376

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 136/256 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM +     ++  Y  L+ GFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++++++++ ++M+  G +P    YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA +L + +        +  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+  +A  L+  M     APN VT NTLM G 
Sbjct: 255 QLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARV 330



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 127/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ +L  EML KG+ P+V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G    A  L+  +   KC   +  ++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++  + R GL P++++YNI + G C+  ++  A     D   K + P  +T
Sbjct: 325 VIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSVRKKIVPTKIT 376



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 130/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++  +L++  Q+G   +AF YS +I+G C    +D+A  +   M  +GC  N   YNT
Sbjct: 110 INKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  EM    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK + A 
Sbjct: 230 LNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+VT+N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFXMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N     +  LH
Sbjct: 350 CSCNRICDAILFLH 363



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 119/229 (51%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YNT++NGY +   +++   L+  M ++G R +V
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ SD   ++ TY   + G CKNG I ++  +   
Sbjct: 60  SSFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK   L+ A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + A  +F +M     +P  +T+NTL+ G  +N    +  +L+  M E+
Sbjct: 180 FEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEK 228



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+   +++  V P+A VY+T+++G+    +I    EL+  M   G   +V ++N 
Sbjct: 6   IDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEG-NRSVSSFNI 64

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      V+E ++++  M         +TY  L HG  +   +  +L + +  +   
Sbjct: 65  MMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMAEQKG 124

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+  I+GLCK   + +A  +   +    C+     Y+ LI+GL    K E A 
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAI 184

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ +  V   P ++TYN +I+G C +    +A+DL  +M  KG+ P+ +T++ LM G 
Sbjct: 185 RVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGL 244

Query: 241 IRNNETSKVVELLHRM 256
             +++  + ++L +++
Sbjct: 245 CLDHKVERALQLWNQV 260


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 133/263 (50%), Gaps = 3/263 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +     ++R V P+ + ++T+I G C  G++ +A ++   +   G   +V TYN+
Sbjct: 172 VDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNS 231

Query: 61  LINGYCKTKDVEESLN---LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           LI+GYCK        +   L  EM+  GI PT VT+  L +G  +      A+++F+EM+
Sbjct: 232 LIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMK 291

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
              +AA   TYN+ I GLC  G + E  +L   +  L        + C++ G CK G + 
Sbjct: 292 QQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA 351

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A +    +    + P+VV YNI+I  +   G+M+ A  +   M  KG++PN  T+N L+
Sbjct: 352 DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            G  R+ +      LL  M E+ 
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKG 434



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 127/247 (51%), Gaps = 3/247 (1%)

Query: 15  GVRPNAFVYSTLIDGFCL---TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           G+ P+   Y++LIDG+C     G +     L   M   G     VT+  LINGYCK  + 
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
             ++ ++ EM  +GI  +VVTYN+L  GL    +VE  +KL +EM+   ++    T+   
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           + G CK G + +A +    +     E  +  Y+ LID   ++GK+E A  + +++ + G+
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGI 400

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
            PNV TYN +I GF   G    A  L  +M+ KG+  + VT+N L+       E  K V+
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 252 LLHRMDE 258
           LL  M E
Sbjct: 461 LLDEMSE 467



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 124/249 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L++ M   G+ PN   +  ++ GFC  G +  A +    M       +VV YN 
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ Y +   +E+++ +   M  KGI P V TYN L  G         A  L DEM+   
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           + A+  TYN  I  LC  G + +A +L   +  +  E     Y+ +I G C  G +++A+
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + +     NVVTYN+ I  FC  G+MD+A+DL  +M  K + PN +T+ T+  G 
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554

Query: 241 IRNNETSKV 249
           +    T  +
Sbjct: 555 MEKGYTPDI 563



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 118/252 (46%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M++ G+ P A  +  LI+G+C       A  +F  M   G   +VVTYN+LI+G C
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               VEE + L  EM   G+ P  +T+  +  G  +   +  A    D M   +V  +  
Sbjct: 311 SEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVV 370

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YN  ID   + G + +A  +   +        +  Y+CLI G  + G   +A  L   +
Sbjct: 371 IYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+  +VVTYN++I   C  G++ KA  L  +M   G+ PN +T+NT++ G       
Sbjct: 431 KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNI 490

Query: 247 SKVVELLHRMDE 258
               E+  RM++
Sbjct: 491 KSAYEIRTRMEK 502



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 9/210 (4%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           + N L+ G    K V+ +   +   L + + P + T+NT+  GL  I Q+  A  +  ++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK--CELGIEA----YSCLIDGL 170
           +   +A   +TYN+ IDG CK G    A  ++    +LK   E GI      +  LI+G 
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK      A  +F+ + + G+  +VVTYN +I G C++G++++   L  +ME  G++PN 
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +TF  ++ G  +    +   + +  M ERN
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERN 364



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 3/175 (1%)

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
           RP+  + N L  GL    +V+ A K F       V+ +  T+NT I GLC+ G + +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE---LFQSLPRVGLMPNVVTYNIMIH 203
           + + ++       +  Y+ LIDG CK G     +    L + +   G+ P  VT+ ++I+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G+C +     A  +F +M+ +G+A + VT+N+L+ G     +  + V+L+  M++
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 8/169 (4%)

Query: 100 LFEIHQVEHALKLFDEM-----QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
           +  + +    L+ +D        H      TS+ N  + GL     +  A + FR+    
Sbjct: 126 VLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR 185

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
           +    I  ++ +I GLC+IG+L  A ++ + +   GL P+V TYN +I G+C  G     
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNM 245

Query: 215 H--DLFL-DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +  D+ L +M   G++P  VTF  L+ G  +N+ T+  V +   M ++ 
Sbjct: 246 YHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 130/249 (52%), Gaps = 2/249 (0%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           +R V  +A+   TLI G C  G    A  +   M    C+ +VVTY  L+   CK    +
Sbjct: 153 ERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 212

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           +++ L  EM  KG  P +VTYN + +G+ +  +V+ A++    +        T +YN  +
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
            GLC      +A EL   +    C   +  ++ LI  LC+ G +E A E+ + +P+ G  
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLD-MEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           PN ++YN ++H FC   +MDKA   FLD M ++G  P+ V++NTL+    R+ E    VE
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAM-AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 391

Query: 252 LLHRMDERN 260
           LLH++ ++ 
Sbjct: 392 LLHQLKDKG 400



 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A   L  +   G  PN   Y+ ++ G C     + A EL   M   GC  NVVT+N 
Sbjct: 246 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 305

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  C+   VE +L +  ++   G  P  ++YN L H   +  +++ A+   D M    
Sbjct: 306 LISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 365

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +YNT +  LC++G +  A EL   L+   C   + +Y+ +IDGL K GK + A 
Sbjct: 366 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 425

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   GL P+++TY+ +  G C + +++ A   F  ++  G+ PN V +N ++LG 
Sbjct: 426 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 485

Query: 241 IRNNETSKVVELLHRM 256
            +  ET   ++L   M
Sbjct: 486 CKRRETHSAIDLFAYM 501



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 129/259 (49%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  L+  M Q+G  PN   ++ LI   C  G ++ A E+   +   GC  N ++YN L
Sbjct: 282 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPL 341

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++ +CK K +++++     M+S+G  P +V+YNTL   L    +V+ A++L  +++    
Sbjct: 342 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 401

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A    +YNT IDGL K G   EA EL   +     +  I  YS +  GLC+  ++E A  
Sbjct: 402 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 461

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  +  +G+ PN V YN +I G C   +   A DLF  M   G  PN  T+  L+ G  
Sbjct: 462 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 521

Query: 242 RNNETSKVVELLHRMDERN 260
                 +  +LL  +  R 
Sbjct: 522 YEGLIKEARDLLDELCSRG 540



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 125/250 (50%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +LD M++R   P+   Y+ L++  C      +A +L   M   GC  ++VTYN ++NG C
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +   V++++     + S G  P  V+YN +  GL    + E A +L  EM          
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N  I  LC+ G +  A E+   +    C     +Y+ L+   CK  K++ A      +
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  P++V+YN ++   C  G++D A +L   ++ KG AP  +++NT++ G  +  +T
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 247 SKVVELLHRM 256
            + +ELL+ M
Sbjct: 422 KEALELLNEM 431



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 122/225 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +L+ + + G  PN+  Y+ L+  FC   ++D+A      M   GC  ++V+YNT
Sbjct: 316 VEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 375

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C++ +V+ ++ L  ++  KG  P +++YNT+  GL +  + + AL+L +EM    
Sbjct: 376 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 435

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY+T   GLC+   I +A   F  ++ +        Y+ +I GLCK  +  +A 
Sbjct: 436 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 495

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           +LF  +   G MPN  TY I+I G   +G + +A DL  ++ ++G
Sbjct: 496 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 10/122 (8%)

Query: 141 IVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           +V   EL   LR++      +A +C  LI  L   G+   A  +  +       P+V+ Y
Sbjct: 77  LVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAY 131

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N M+ G+C  GQ+D A     +   + V  +  T +TL+ G      T+  + +L  M  
Sbjct: 132 NAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLR 188

Query: 259 RN 260
           R 
Sbjct: 189 RR 190


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 130/260 (50%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A   L  MI  G++   + Y++LI+G C  G +  A   F  M   G    VV+Y +
Sbjct: 417 LDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTS 476

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GYC    + E+  LY EM  KGI P   T+ TL   LF  +++  A +LFDEM   +
Sbjct: 477 LISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN 536

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I+G CK G  V+A EL   +           Y  LI  LC  G++  A 
Sbjct: 537 MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAK 596

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +    L R     N + Y+ ++HG+C +G++  A  +  +M  +GV  + V +  L+ G 
Sbjct: 597 KFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGT 656

Query: 241 IRNNETSKVVELLHRM-DER 259
           I+  +TS V  LL  M D+R
Sbjct: 657 IKEQDTSAVFGLLKNMHDQR 676



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  + + +IQ+G+  +   Y TL+ G C   E +    +   M   G +      ++L+
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G  +   V ++ +L + +   G  P++  YN L + L +  + + A  LF EM    + 
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TY+  ID  C+ G +  A      + +   ++ +  Y+ LI+G CK+G L  A   
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   GL P VV+Y  +I G+CN G++ +A  L+ +M  KG+APN  TF TL+    R
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518

Query: 243 NNETSKVVELLHRMDERN 260
            N  +    L   M E+N
Sbjct: 519 ANRMTDAFRLFDEMLEQN 536



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 128/249 (51%), Gaps = 2/249 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           ++  G+RP+ ++Y  +I  FC      +A+E+   M+ +    NVV YN LI+G CK K 
Sbjct: 219 ILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKR 276

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V E++ + + ++ KG+  + VTY TL  GL ++ + E    + DEM         +  ++
Sbjct: 277 VWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSS 336

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ++GL + G +V+A +L   ++ +     +  Y+ LI+ LCK GK + A  LF+ +   G
Sbjct: 337 LVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKG 396

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L  N VTY+I+I  FC  G++D A      M   G+      +N+L+ G  +    S  V
Sbjct: 397 LCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAV 456

Query: 251 ELLHRMDER 259
                M ++
Sbjct: 457 SFFDEMIDK 465



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 123/241 (51%), Gaps = 1/241 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M  + +RP+  +Y+++IDG+   G + +A  ++  M   GC  N+VTY TLIN  C
Sbjct: 668 LLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELC 727

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   ++++  L+ EML     P  VTY      L     +E A++L ++M    + A T 
Sbjct: 728 KAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKG-LLANTV 786

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +YN  + G CK G + EA +L   +           YS +I   C+ G L+ A E + ++
Sbjct: 787 SYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTM 846

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              GL P+ + YN +I+G C  G++ KA +L  DM  +GV PN  T  +L  G  R    
Sbjct: 847 LNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSI 906

Query: 247 S 247
           S
Sbjct: 907 S 907



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 132/289 (45%), Gaps = 36/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL+ M+Q+G+ P+ + Y  LI   C TG +  A++    +       N + Y+ L+
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618

Query: 63  NGYCKTKDVEESLNLYSEMLSKGI-----------------------------------R 87
           +GYCK   + ++L +  EM+ +G+                                   R
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLR 678

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P  V Y ++  G  +   V+ A  ++D M          TY T I+ LCK G + +A  L
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELL 738

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           ++ + V         Y C +D L + G +E A +L   + + GL+ N V+YNI++ GFC 
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCK 797

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G++++A  L  +M    + P+C+T++T++  C R       +E    M
Sbjct: 798 LGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTM 846



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 3/250 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++RGV  +   Y+ LIDG     +      L  +M       + V Y ++I+GY K   
Sbjct: 637 MVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGS 696

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+++  ++  M+ +G  P +VTY TL + L +   ++ A  L+ EM  S+      TY  
Sbjct: 697 VKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCC 756

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           F+D L + G + +A +L   +  LK  L    +Y+ L+ G CK+G++E A +L   +   
Sbjct: 757 FLDHLAREGSMEKAVQLHNDM--LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDN 814

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            + P+ +TY+ +I+  C  G +D A + +  M  KG+ P+ + +N L+ GC    E  K 
Sbjct: 815 AIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKA 874

Query: 250 VELLHRMDER 259
            EL   M  R
Sbjct: 875 FELRDDMIRR 884



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 111/237 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA RL   M  +G+ PN + ++TLI        +  A  LF  M     M N VTYN 
Sbjct: 487 LHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNV 546

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G+CK  +  ++  L ++M+ KG+ P   TY  L   L    +V  A K  D++    
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y+  + G CK G + +A  + R +     ++ +  Y+ LIDG  K       +
Sbjct: 607 FKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVF 666

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            L +++    L P+ V Y  MI G+   G + KA  ++  M  +G  PN VT+ TL+
Sbjct: 667 GLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 37/240 (15%)

Query: 52  MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
           M  V T   ++NG  K + V+  L L+ E+LS GIRP +  Y  +     E+     A +
Sbjct: 190 MPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKE 249

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-------------------- 151
           +   M+ SD+      YN  I GLCKN  + EA E+   L                    
Sbjct: 250 MIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLC 307

Query: 152 RVLKCELGI---------------EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
           +V + E+G                 A S L++GL + GK+  A++L   + +VG MP++ 
Sbjct: 308 KVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLF 367

Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            YN +I+  C DG+ D+A  LF +M  KG+  N VT++ L+    R  +    +  L +M
Sbjct: 368 VYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM 427



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 36/204 (17%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  L   M+     PN   Y   +D     G +++A +L   M + G + N V+YN 
Sbjct: 732 MDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNI 790

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+CK   VEE+  L  EM+   I P  +TY+T+ +       ++ A++ +D M +  
Sbjct: 791 LVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKG 850

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T  YN  I                              Y C     C  G+L  A+
Sbjct: 851 LKPDTLAYNFLI------------------------------YGC-----CIAGELGKAF 875

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHG 204
           EL   + R G+ PN  T+  + HG
Sbjct: 876 ELRDDMIRRGVKPNQATHKSLSHG 899


>gi|255660994|gb|ACU25666.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 376

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 134/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM + G   ++  +  L+ GFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  + ++++++ + M+  G +P    YNTL +GL    + E A+ +F EM    
Sbjct: 135 MINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASKFEDAIIVFREMGTMH 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCK     EA  L + L       G+  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+M  A  L+ DM     APN V+ NTLM G 
Sbjct: 255 QLWNQVTSKGFKPDVRMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGF 314

Query: 241 IRNNETSKVVELLHRM 256
            ++ +    + +  R+
Sbjct: 315 YKDGDIRNALVIWARI 330



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 127/231 (54%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNTL
Sbjct: 146 DKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASKFEDAIIVFREMGTMHCSPTIITYNTL 205

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING CK +   E+ NL  E+L KG+ P V+TY+ L  GL   H+VE AL+L++++     
Sbjct: 206 INGLCKKEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGF 265

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +   +N  I GLC  G +  A  L+  +   KC   + +++ L++G  K G +  A  
Sbjct: 266 KPDVRMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALV 325

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           ++  + R GL P++++YNI + G C+  ++  A     D  AK +    +T
Sbjct: 326 IWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVAKKIVLTKIT 376



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 130/254 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++  +L++  Q+G   +AF YS +I+G C     D+A  +   M  +GC  N   YNT
Sbjct: 110 INKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM +    PT++TYNTL +GL +      A  L  E+    
Sbjct: 170 LINGLVAASKFEDAIIVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  +  ++ LI GLC +GK++ A 
Sbjct: 230 LNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVRMHNILIHGLCSVGKMQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+V++N ++ GF  DG +  A  ++  +   G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N  S  +  LH
Sbjct: 350 CSCNRISDAILFLH 363



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 1/209 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID A  ++  +  +    + V YN ++NGY +   +++   L+  M S+G R +V
Sbjct: 1   CESGDIDGAERVYKEIVESKMSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ S    ++ T+   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK    + A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + A  +F +M     +P  +T+NTL+ G
Sbjct: 180 FEDAIIVFREMGTMHCSPTIITYNTLING 208



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 1/191 (0%)

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C++ D++ +  +Y E++   + P  V YN + +G F + +++   +L+ EM  S+     
Sbjct: 1   CESGDIDGAERVYKEIVESKMSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSV 59

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
           S++N  + GL  NG + E   ++  ++          +  L+ G CK G +  +  + + 
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLEM 119

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
             + G + +   Y+ MI+G C +   DKA  +   M   G  PN   +NTL+ G +  ++
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASK 179

Query: 246 TSKVVELLHRM 256
               + +   M
Sbjct: 180 FEDAIIVFREM 190


>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 123/232 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+  +R +D +I  G+  N + Y+ +ID  C    +DRA E+F  +   G   N+VTYNT
Sbjct: 455 MEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNT 514

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C+  +++++  L   +L    RP + T+N+L  GL + H+ E+A   F EM   D
Sbjct: 515 LIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWD 574

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN  I   C  G +  +  L R +++   +    +++ LI G     + + A 
Sbjct: 575 VPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAE 634

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           +LF S+ R+G+ P+  TY  +I   C  G+ DKA ++FL M+  G  P+  T
Sbjct: 635 KLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYT 686



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 122/279 (43%), Gaps = 41/279 (14%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           P+ F Y+ LI G C  G +D A  L   M+  G   NV TY  LI+G+   K   E+  +
Sbjct: 262 PDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKV 321

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE-------------------MQH 118
              M  + + P   T  +L HG+F     + A +L  E                   + +
Sbjct: 322 LQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSN 381

Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR-VLK------------------CELG 159
           + +A+E      F+    K GY+  ++    TL  VLK                   + G
Sbjct: 382 NSMASEAVM---FLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPG 438

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
              Y  LI+ L K GK+E        L   GL+ N+ +YN++I   C    MD+A ++F 
Sbjct: 439 FSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFR 498

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           D+  +G++PN VT+NTL+ G  RN    K  ELL  + E
Sbjct: 499 DLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLE 537



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 35/250 (14%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + D  +Q GV+P    Y TLI+     G+++        +  +G + N+ +YN +I+  C
Sbjct: 426 VFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLC 485

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K K ++ +    SEM                               F ++ +  ++    
Sbjct: 486 KGKSMDRA----SEM-------------------------------FRDLHNRGISPNIV 510

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYNT I G C+NG + +A EL   L   +    I  ++ LIDGLC+  K E A+  F  +
Sbjct: 511 TYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEM 570

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
               + PNV+TYNI+I  FC  G + ++  L   M+  G+ P+  +FN L+ G    N  
Sbjct: 571 VEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRF 630

Query: 247 SKVVELLHRM 256
            K  +L   M
Sbjct: 631 QKAEKLFDSM 640



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 35/289 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-------------DIN 49
           EA ++L  M +R V PN     +L+ G       D+A EL +               +I 
Sbjct: 317 EAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNIL 376

Query: 50  GCMHN----------------------VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
            C+ N                        T+N  +    K  D++ +  ++   +  G++
Sbjct: 377 YCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVK 436

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P   TY TL   L++  ++E   +  D + +  + +   +YN  ID LCK   +  A+E+
Sbjct: 437 PGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEM 496

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
           FR L        I  Y+ LI G C+ G ++ A EL + L      P++ T+N +I G C 
Sbjct: 497 FRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQ 556

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             + + A   F +M    V PN +T+N L+       + S+   LL +M
Sbjct: 557 AHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQM 605



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 88/191 (46%)

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
           + V  S++L  ++   G++ T      LF     +    + +++F ++    +   T  Y
Sbjct: 173 RPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLY 232

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           N  +D L K+  +  A   F+ +    C      Y+ LI G+C++G ++ A  L + +  
Sbjct: 233 NAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEG 292

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +G  PNV TY I+I GF N  +  +A  +   M+ + V PN  T  +L+ G  R     K
Sbjct: 293 LGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDK 352

Query: 249 VVELLHRMDER 259
             ELL    ER
Sbjct: 353 AFELLLEFVER 363



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++  V PN   Y+ LI  FC  G++ R+  L   M ++G   +  ++N LI GY     
Sbjct: 570 MVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNR 629

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +++  L+  ML  GI+P   TY  L   L +  + + A ++F  M+ +    ++ T + 
Sbjct: 630 FQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSL 689

Query: 131 FIDGL 135
           F D L
Sbjct: 690 FSDTL 694



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 3/164 (1%)

Query: 85  GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
           G+ PT   YN +   L + + ++ A   F +M   +   +  TYN  I G+C+ G + EA
Sbjct: 224 GLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEA 283

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
             L + +  L     +  Y+ LIDG     +   A+++ Q++    ++PN  T   ++HG
Sbjct: 284 LRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHG 343

Query: 205 FCNDGQMDKAHDLFLD-MEAKGVAPNCVTFNTLMLGCIRNNETS 247
                  DKA +L L+ +E K      V  N  +L C+ NN  +
Sbjct: 344 VFRCIAPDKAFELLLEFVERKQGITQLVCDN--ILYCLSNNSMA 385



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 56/115 (48%)

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           E+F  + +L        Y+ ++D L K   L+ A+  FQ +     +P+  TYNI+IHG 
Sbjct: 215 EVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGV 274

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           C  G +D+A  L   ME  G  PN  T+  L+ G        +  ++L  M ERN
Sbjct: 275 CRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERN 329



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 3/202 (1%)

Query: 41  ELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGL 100
           E+F  + + G       YN +++   K+  ++ +   + +M S    P   TYN L HG+
Sbjct: 215 EVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGV 274

Query: 101 FEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
             +  V+ AL+L  +M+         TY   IDG        EA ++ +T++        
Sbjct: 275 CRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNE 334

Query: 161 EAYSCLIDGLCKIGKLETAWE-LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
                L+ G+ +    + A+E L + + R   +  +V  NI+ +   N+    +A    +
Sbjct: 335 ATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNIL-YCLSNNSMASEAVMFLI 393

Query: 220 DMEAKGVAPNCVTFNTLMLGCI 241
               +G  P+  TFN + L C+
Sbjct: 394 KTGKEGYVPSSSTFN-ITLACV 414


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 136/280 (48%), Gaps = 23/280 (8%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +L  MI +G+ P+ + Y+ L+DG C  G +  A+ +   M  NG   + VTY  L+
Sbjct: 344 EAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLL 403

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYC    V+ + +L  EM+     P   T N L H L+ + ++  A +L  +M      
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYG 463

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-----------------------KCELG 159
            +T T N  +DGLC +G + +A E+ + +RV                         C   
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523

Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           +  YS L++GLCK G+   A  LF  +    L P+ + YNI IH FC  G++  A  +  
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLK 583

Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           DME KG   +  T+N+L+LG    N+  ++  L+  M E+
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREK 623



 Score =  146 bits (369), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 39/298 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L D M ++G +PN F +  L+ G+C  G  D+  EL  SM+  G + N V YNT
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNT 222

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI---------------------------------- 86
           +++ +C+    ++S  L  +M  +G+                                  
Sbjct: 223 IVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282

Query: 87  -----RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
                RP  +TYN +  G  ++  +E A  LF+ ++ +D      +YN ++ GL ++G  
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKF 342

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
           +EA  + + +        I +Y+ L+DGLCK+G L  A  +   + R G+ P+ VTY  +
Sbjct: 343 IEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCL 402

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +HG+C+ G++D A  L  +M      PN  T N L+         S+  ELL +M+E+
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEK 460



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 6/240 (2%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           S L   M+  G+ P  + ++ LI   C +  +D ARELF  M   GC  N  T+  L+ G
Sbjct: 132 SWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRG 191

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           YCK    ++ L L + M S G+ P  V YNT+        + + + KL ++M+   +  +
Sbjct: 192 YCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPD 251

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-----AYSCLIDGLCKIGKLETA 179
             T+N+ I  LCK G +++A+ +F  +  L   LG+       Y+ ++ G CK+G LE A
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDME-LDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             LF+S+     + ++ +YNI + G    G+  +A  +   M  KG+ P+  ++N LM G
Sbjct: 311 KTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDG 370



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 23/283 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  ++ LM + GV P+A  Y  L+ G+C  G++D A+ L   M  N C+ N  T N 
Sbjct: 377 LSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++       + E+  L  +M  KG     VT N +  GL    +++ A+++   M+   
Sbjct: 437 LLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496

Query: 121 VAA-----------------------ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
            AA                       +  TY+T ++GLCK G   EA  LF  +   K +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQ 556

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
               AY+  I   CK GK+ +A+ + + + + G   ++ TYN +I G     Q+ + H L
Sbjct: 557 PDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +M  KG++PN  T+NT +       +      LL  M ++N
Sbjct: 617 MDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKN 659



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 1/251 (0%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           D +I+    P+   YSTL++G C  G    A+ LF  M       + + YN  I+ +CK 
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQ 572

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             +  +  +  +M  KG   ++ TYN+L  GL   +Q+     L DEM+   ++    TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTY 632

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
           NT I  LC+ G + +A  L   +        + ++  LI   CK+   + A E+F++   
Sbjct: 633 NTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVS 692

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           +      + Y++M +     GQ+ KA +L   +  +G       +  L++   + +E   
Sbjct: 693 ICGQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEV 751

Query: 249 VVELLHRMDER 259
              +LH+M ++
Sbjct: 752 ASGILHKMIDK 762



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 1/223 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L   M+   ++P++  Y+  I  FC  G+I  A  +   M+  GC  ++ TYN+LI
Sbjct: 542 EAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G      + E   L  EM  KGI P + TYNT    L E  +VE A  L DEM   ++A
Sbjct: 602 LGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIA 661

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               ++   I   CK      A E+F T  V  C      YS + + L   G+L  A EL
Sbjct: 662 PNVFSFKYLIGAFCKVPDFDMAQEVFET-AVSICGQKEGLYSLMFNELLAAGQLLKATEL 720

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            +++   G       Y  ++   C   +++ A  +   M  KG
Sbjct: 721 LEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKG 763



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 12/251 (4%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           +P  ++Y+ L++       ++    L+  M + G      T+N LI   C +  V+ +  
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L+ EM  KG +P   T+  L  G  +    +  L+L + M+   V      YNT +   C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ--------SLPR 188
           + G   ++ +L   +R       I  ++  I  LCK GK+  A  +F          LPR
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
               PN +TYN+M+ GFC  G ++ A  LF  +       +  ++N  + G +R+ +  +
Sbjct: 289 ----PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIE 344

Query: 249 VVELLHRMDER 259
              +L +M ++
Sbjct: 345 AETVLKQMIDK 355



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 6/262 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A R+L  M ++G   +   Y++LI G  +  +I     L   M   G   N+ TYNT
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNT 634

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I   C+   VE++ NL  EM+ K I P V ++  L     ++   + A ++F E   S 
Sbjct: 635 AIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF-ETAVSI 693

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+   + L   G +++A EL   +     ELG   Y  L+  LCK  +LE A 
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVAS 753

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL---FLDMEAKGVAPNCVTFNTLM 237
            +   +   G   +      +I G    G   +A++     ++M + G   N V  N   
Sbjct: 754 GILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVANKVDPNATD 813

Query: 238 LGCIRNNETS--KVVELLHRMD 257
           +   ++N+ S      +LHR D
Sbjct: 814 IHQKKHNKYSGNNWQNILHRDD 835


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 125/260 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   +  R   P+ + YSTL+ G C    ID A  L   M + G   N+V +N 
Sbjct: 186 VDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNV 245

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  D+  +  L   M  KG  P  VTYN L HGL    ++E A+ L ++M  + 
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 T+ T I+G    G   +   +  +L           YS LI GLCK GK   A 
Sbjct: 306 CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAM 365

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL++ +   G  PN + Y+ +I G C +G++D+A     +M+ KG  PN  T+++LM G 
Sbjct: 366 ELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGY 425

Query: 241 IRNNETSKVVELLHRMDERN 260
               ++ K + +   M   N
Sbjct: 426 FEAGDSHKAILVWKEMANNN 445



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 134/245 (54%), Gaps = 3/245 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            + +R+L  +  RG R N +VYS+LI G C  G+ ++A EL+  M   GC  N + Y+ L
Sbjct: 327 SDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSAL 386

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G C+   ++E+    SEM +KG  P   TY++L  G FE      A+ ++ EM +++ 
Sbjct: 387 IDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNC 446

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                 Y+  I+GLCK+G  +EA  +++ +     +L + AYS +I G C    +E   +
Sbjct: 447 IHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLK 506

Query: 182 LFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           LF  +   G  + P+V+TYNI+++ FC    + +A D+   M  +G  P+ +T + + L 
Sbjct: 507 LFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCD-IFLK 565

Query: 240 CIRNN 244
            +R N
Sbjct: 566 TLREN 570



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LLD M   G  PN   ++ LI   C  G++ RA +L  +M + GC+ N VTYN 
Sbjct: 221 IDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNA 280

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G C    +E++++L ++M+S    P  VT+ TL +G     +     ++   ++   
Sbjct: 281 LVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARG 340

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y++ I GLCK G   +A EL++ +    C      YS LIDGLC+ GKL+ A 
Sbjct: 341 HRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEAR 400

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +   G +PN  TY+ ++ G+   G   KA  ++ +M       N V ++ L+ G 
Sbjct: 401 GFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGL 460

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ +  + + +  +M  R
Sbjct: 461 CKDGKFMEALMVWKQMLSR 479



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 131/258 (50%), Gaps = 2/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  LL+ M+     PN   + TLI+GF + G       + VS++  G   N   Y++
Sbjct: 291 LEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSS 350

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK     +++ L+ EM+ KG  P  + Y+ L  GL    +++ A     EM++  
Sbjct: 351 LISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKG 410

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               + TY++ + G  + G   +A  +++ +    C      YS LI+GLCK GK   A 
Sbjct: 411 YLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEAL 470

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG--VAPNCVTFNTLML 238
            +++ +   G+  +VV Y+ MIHGFCN   +++   LF  M  +G  V P+ +T+N L+ 
Sbjct: 471 MVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLN 530

Query: 239 GCIRNNETSKVVELLHRM 256
                    + +++L+ M
Sbjct: 531 AFCIQKSIFRAIDILNIM 548



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 3/212 (1%)

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEML---SKGIRPTVVTYNTLFHGLFEIHQVE 107
           C   V ++N+++N   +      +L  Y+ ++   S  I P  +T+N +   +  +  V+
Sbjct: 128 CKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVD 187

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            A+++F E+   + A +  TY+T + GLCK   I EA  L   ++V      + A++ LI
Sbjct: 188 KAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLI 247

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
             LCK G L  A +L  ++   G +PN VTYN ++HG C  G+++KA  L   M +    
Sbjct: 248 SALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCV 307

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           PN VTF TL+ G +     S    +L  ++ R
Sbjct: 308 PNDVTFGTLINGFVMQGRASDGTRVLVSLEAR 339



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 23/165 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTYNT 60
           EA  +   M+ RG++ +   YS++I GFC    +++  +LF  M   G     +V+TYN 
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE----------------IH 104
           L+N +C  K +  ++++ + ML +G  P  +T +     L E                + 
Sbjct: 528 LLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVR 587

Query: 105 QVEH-----ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
            V+      A K+ + M H  +  + ST+   +  +CK   + +A
Sbjct: 588 LVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKA 632


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 137/258 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L+D M  + + P+ F Y++L+DG   +G ++ A  +F  M   G   +VV Y +
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++   K   +  +L ++  M  K   P VVTY++L   L +  +VE A   F+      
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y++ ID   K G +  A ELF  ++  +C   I  Y+ L+ GL K G+L  A 
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + + +VG +P++VTYNI+I G    G +D+A   F  M+ KG+ P+ +TF +L+   
Sbjct: 899 KLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL 958

Query: 241 IRNNETSKVVELLHRMDE 258
            + ++  +  EL   M+E
Sbjct: 959 GKVDKLLEACELFDSMEE 976



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 134/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++ + + +  + P+ FVY+ +++G   +  +D A +L  SM     + ++ TY +
Sbjct: 684 IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTS 743

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K+  +EE+ N++++M  +G  P VV Y +L   L +  ++ HAL +F  M    
Sbjct: 744 LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR 803

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TY++ ID L K G + EA   F       C   +  YS LID   K G ++ A 
Sbjct: 804 CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRAL 863

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF+ + R    PN+VTYN ++ G    G+++ A  L  +ME  G  P+ VT+N L+ G 
Sbjct: 864 ELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923

Query: 241 IRNNETSKVVELLHRMDERN 260
            +     +      RM E+ 
Sbjct: 924 GKMGMVDEAESYFKRMKEKG 943



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 133/237 (56%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M ++G  P+   YS+L+  F    + + +  LF  M   GC+ +V TY+ 
Sbjct: 579 LDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSL 638

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK+ DV+++L+++  M  +G+ P +  Y TL   L +  +++ AL++F+E+Q S 
Sbjct: 639 VINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESS 698

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T  YN  ++GL K+  + EA +L  +++       +  Y+ L+DGL K G+LE A+
Sbjct: 699 LVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAF 758

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +F  +   G  P+VV Y  ++      G++  A  +F  M  K   P+ VT+++L+
Sbjct: 759 NMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLI 815



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 132/256 (51%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            ++EA  +   M + G  P+   Y++L+D     G++  A  +F +M    C+ +VVTY++
Sbjct: 754  LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS 813

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LI+   K   VEE+   +   +SKG  P V  Y++L     +   V+ AL+LF+EMQ   
Sbjct: 814  LIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQ 873

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  TYN  + GL K G +  A +L   +  + C   +  Y+ LIDG+ K+G ++ A 
Sbjct: 874  CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAE 933

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              F+ +   G++P+V+T+  +I       ++ +A +LF  ME +G  P+ VT+N L+   
Sbjct: 934  SYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDIL 993

Query: 241  IRNNETSKVVELLHRM 256
             R  +  +   + H M
Sbjct: 994  GRAGKVHEAAMIFHEM 1009



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 128/236 (54%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+TL+  F   G +D A +L   M  + C+  VVTY TL++G  K   ++E+++L  EM 
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
            +G  P+VVTY++L    ++  Q E +L LFDEM      A+ STY+  I+ LCK+  + 
Sbjct: 591 KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVD 650

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           +A ++F  ++    E  +  Y  L+  L K  K++ A ++F  L    L+P+   YNIM+
Sbjct: 651 QALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMV 710

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           +G     ++D+A  L   M+ + + P+  T+ +L+ G  ++    +   +  +M E
Sbjct: 711 NGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE 766



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 130/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +   M + G+ P    Y TL+       +ID A ++F  +  +  + +   YN 
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++NG  K+  V+E+  L   M ++ I P + TY +L  GL +  ++E A  +F +M    
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y + +D L K G +  A  +FR +   +C   +  YS LID L K G++E A+
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F++    G  PNV  Y+ +I  F   G +D+A +LF +M+ +   PN VT+N L+ G 
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888

Query: 241 IRNNETSKVVELLHRMDE 258
            +    +   +LL  M++
Sbjct: 889 AKAGRLNVAEKLLEEMEK 906



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 119/226 (52%)

Query: 11   MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
            M ++   P+   YS+LID     G ++ A   F +    GC  NV  Y++LI+ + K   
Sbjct: 799  MAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM 858

Query: 71   VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            V+ +L L+ EM  +   P +VTYN L  GL +  ++  A KL +EM+      +  TYN 
Sbjct: 859  VDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNI 918

Query: 131  FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
             IDG+ K G + EA   F+ ++       +  ++ LI+ L K+ KL  A ELF S+   G
Sbjct: 919  LIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG 978

Query: 191  LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
              P+VVTYN++I      G++ +A  +F +M+ KG  P+ +T   +
Sbjct: 979  YNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 31/291 (10%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+  +  MI+ G+ P    ++ LID    +G ID A + F  M    C  NVVTY T
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTT 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K   +EE+  ++ EM      P  + YNTL  GL +  + + A  LF EM+   
Sbjct: 363 LVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRG 422

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TYN  I  L K G   EA +LF  L+       +  Y+ LID L K G+++   
Sbjct: 423 LVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVL 482

Query: 181 ELFQSL------------------------------PRVGLMP-NVVTYNIMIHGFCNDG 209
            + + +                              P +G      +TYN ++  F ++G
Sbjct: 483 AIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNG 542

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +D+A  L   M+     P  VT+ TL+ G  +     + V LL  M+++ 
Sbjct: 543 HVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 35/294 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC-----MHNVV 56
           D   ++L  M + G R +  + ++L+  F  T  +  A E+F  M   GC     M+N V
Sbjct: 199 DAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFV 258

Query: 57  ------------------------------TYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                                         T+   ++ + ++  ++ +     EM+  GI
Sbjct: 259 LELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGI 318

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P V T+  L   L +   ++ A K F+ M++   +    TY T ++GL K G + EA E
Sbjct: 319 DPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACE 378

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +F  ++   C     AY+ LIDGL K G+ + A  LF+ +   GL+PN+ TYNIMI    
Sbjct: 379 VFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLG 438

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             G+  +A  LF D++ +G  P+  T+NTL+    +  +  KV+ ++  M E+ 
Sbjct: 439 KAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 103/201 (51%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            ++EA    +  I +G  PN  VYS+LID F   G +DRA ELF  M    C  N+VTYN 
Sbjct: 824  VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            L++G  K   +  +  L  EM   G  P +VTYN L  G+ ++  V+ A   F  M+   
Sbjct: 884  LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  +  T+ + I+ L K   ++EA ELF ++        +  Y+ LID L + GK+  A 
Sbjct: 944  IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAA 1003

Query: 181  ELFQSLPRVGLMPNVVTYNIM 201
             +F  +   G MP+ +T  IM
Sbjct: 1004 MIFHEMKVKGCMPDGITIGIM 1024



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 116/248 (46%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q G       Y+ +I       E D   ++  +M   G   ++    +L+  +  T +V 
Sbjct: 175 QDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVS 234

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
            +L ++++M S G  P+   YN +   L +      A+ +F ++    +  +  T+  F+
Sbjct: 235 GALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFV 294

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
               ++G +  AAE  + +     + G+  ++ LID L K G ++ A + F  +  +   
Sbjct: 295 HSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCS 354

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           PNVVTY  +++G    G++++A ++F++M+    +P+ + +NTL+ G  +  E      L
Sbjct: 355 PNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGL 414

Query: 253 LHRMDERN 260
              M +R 
Sbjct: 415 FKEMKDRG 422



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +DEA      M ++G+ P+   +++LI+      ++  A ELF SM+  G   +VVTYN 
Sbjct: 929  VDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNV 988

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
            LI+   +   V E+  ++ EM  KG  P  +T   +   L    Q  HAL+
Sbjct: 989  LIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHALE 1039


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 134/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  +++ M  +G+  +   Y+TL+ GF  +G+ D A E+   M  +G   +VVT+ T
Sbjct: 205 MAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTT 264

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YCK K +EE+  LY  M+  G+ P VVT + L  GL    +   A  LF EM    
Sbjct: 265 LIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIG 324

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA    TY TFID L K   + E+  L   +      + +  Y+ ++D L K GK+E A 
Sbjct: 325 VAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAK 384

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ +      + PN VTY +++   C  G +D A  + L ME K V+PN VTF++++ G 
Sbjct: 385 DVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGL 444

Query: 241 IRNNETSKVVELLHRMDE 258
           ++    +K    + +M +
Sbjct: 445 VKRGCIAKAAGYMRKMKD 462



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 129/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++L  M ++ V PN   +S++++G    G I +A      M  +G   NVVTY T
Sbjct: 415 IDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGT 474

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K +  E +L++Y +ML +G+       ++L +GL +   +E A  LF +M    
Sbjct: 475 LIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERG 534

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y T +DGL K G +  A ++ + L           Y+  I+ LC++GK   A 
Sbjct: 535 LLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAK 594

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + +   GL P+  TYN MI   C +G   KA  L  +M+   + PN +T+ TL++G 
Sbjct: 595 SFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGL 654

Query: 241 IRNNETSKVVELLHRM 256
           +      K   LL+ M
Sbjct: 655 LEAGVVEKAKYLLNEM 670



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 122/260 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L + M++ GV P+    S L+DG C  G    A  LF  MD  G   N VTY T
Sbjct: 275 IEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCT 334

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+   K + V ESL L  EM+S+G+   +V Y T+   L +  ++E A  +       +
Sbjct: 335 FIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDN 394

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   +D  C+ G I  A ++   +        +  +S +++GL K G +  A 
Sbjct: 395 ITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAA 454

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + +   G+ PNVVTY  +I GF      + A D++ DM  +GV  N    ++L+ G 
Sbjct: 455 GYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGL 514

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N    +   L   M ER 
Sbjct: 515 RKNGNIEEAEALFKDMGERG 534



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 132/260 (50%), Gaps = 2/260 (0%)

Query: 3   EASRLLDLMIQ-RGVRPNAFV-YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           EA+ L +++++ RG+     V ++ LIDG+C   ++  A  +   M   G   +VV YNT
Sbjct: 170 EAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNT 229

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G+  + D + +  +   M + G+ P+VVT+ TL     ++ ++E A  L++ M  S 
Sbjct: 230 LVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSG 289

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +  T +  +DGLC++G   EA  LFR +  +        Y   ID L K+ ++  + 
Sbjct: 290 VLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESL 349

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   +   G+  ++V Y  ++     +G++++A D+     +  + PNCVT+  L+   
Sbjct: 350 GLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAH 409

Query: 241 IRNNETSKVVELLHRMDERN 260
            R        ++L +M+E++
Sbjct: 410 CRAGNIDGAEQMLLQMEEKS 429



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 120/250 (48%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+  +  M   G+ PN   Y TLIDGF      + A +++  M   G   N    ++L+
Sbjct: 452 KAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLV 511

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG  K  ++EE+  L+ +M  +G+    V Y TL  GLF+   +  ALK+  E+   +++
Sbjct: 512 NGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLS 571

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YN FI+ LC+ G   EA    + +R    E     Y+ +I   C+ G    A +L
Sbjct: 572 PDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKL 631

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +    + PN++TY  ++ G    G ++KA  L  +M + G  P  +T+  ++  C  
Sbjct: 632 LNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSG 691

Query: 243 NNETSKVVEL 252
           +     ++E+
Sbjct: 692 SRSPYVILEV 701



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 4/241 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A ++   +++R + P+A VY+  I+  C  G+   A+     M   G   +  TYNT
Sbjct: 555 MPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNT 614

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  C+  +  ++L L +EM    I+P ++TY TL  GL E   VE A  L +EM  + 
Sbjct: 615 MISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAG 674

Query: 121 VAAETSTYNTFIDGL--CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
                 TY   +      ++ Y++   E+   +        I  Y+ L+  LC  G    
Sbjct: 675 FTPTPLTYRRVLQACSGSRSPYVI--LEVHELMMGAGLHADITVYNTLVHVLCCHGMTRK 732

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  +   +   G+ P+ +T+N +I G C    +D A   +  M  +G++PN  TFNTL+ 
Sbjct: 733 ATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLG 792

Query: 239 G 239
           G
Sbjct: 793 G 793



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 132/325 (40%), Gaps = 70/325 (21%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLT---------------------------- 33
            EA  L   M + GV PN   Y T ID                                 
Sbjct: 311 SEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTV 370

Query: 34  -------GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                  G+I+ A+++      +    N VTY  L++ +C+  +++ +  +  +M  K +
Sbjct: 371 MDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSV 430

Query: 87  RPTVVTYNTLFHGL-----------------------------------FEIHQVEHALK 111
            P VVT++++ +GL                                   F+    E AL 
Sbjct: 431 SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           ++ +M H  V A     ++ ++GL KNG I EA  LF+ +      L    Y+ L+DGL 
Sbjct: 491 VYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLF 550

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G +  A ++ Q L    L P+ V YN+ I+  C  G+  +A     +M   G+ P+  
Sbjct: 551 KTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQA 610

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           T+NT++    R   TSK ++LL+ M
Sbjct: 611 TYNTMISAQCREGNTSKALKLLNEM 635



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 35/294 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA   L  M   G+ P+   Y+T+I   C  G   +A +L   M  +    N++TY TL
Sbjct: 591 SEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTL 650

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG---------LFEIHQV------ 106
           + G  +   VE++  L +EM S G  PT +TY  +            + E+H++      
Sbjct: 651 VVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGL 710

Query: 107 --------------------EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
                                 A  + DEM    +A +T T+N  I G CK+ ++  A  
Sbjct: 711 HADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFA 770

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
            +  +        I  ++ L+ GL   G++  A  +   + ++GL PN +TY+I++ G+ 
Sbjct: 771 TYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYA 830

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
                 +A  L+ +M +KG  P   T+N+L+    +    ++  EL   M  R 
Sbjct: 831 KKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRG 884



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 35/292 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA---------------------- 39
            +A +LL+ M    ++PN   Y+TL+ G    G +++A                      
Sbjct: 626 SKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRV 685

Query: 40  -------RELFVSMDIN------GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                  R  +V ++++      G   ++  YNTL++  C      ++  +  EML +GI
Sbjct: 686 LQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGI 745

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P  +T+N L  G  +   +++A   + +M H  ++   +T+NT + GL   G I EA  
Sbjct: 746 APDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADT 805

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +   ++ +  E     Y  L+ G  K      A  L+  +   G +P   TYN +I  F 
Sbjct: 806 VICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFA 865

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             G M++A +LF +M+ +GV     T++ L+ G  +    ++V  LL  M E
Sbjct: 866 KAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKE 917



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 14/235 (5%)

Query: 9   DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
           +LM+  G+  +  VY+TL+   C  G   +A  +   M   G   + +T+N LI G+CK+
Sbjct: 703 ELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKS 762

Query: 69  KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
             ++ +   Y++ML +G+ P + T+NTL  GL    ++  A  +  EM+   +     TY
Sbjct: 763 SHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTY 822

Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCEL-------GIEAYSCLIDGLCKIGKLETAWE 181
           +  + G  K    VEA  L+       CE+           Y+ LI    K G +  A E
Sbjct: 823 DILVTGYAKKSNKVEALRLY-------CEMVSKGFIPKASTYNSLISDFAKAGMMNQAKE 875

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           LF  + R G++    TY+I+++G+       +   L  DM+  G  P+  T +++
Sbjct: 876 LFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSM 930



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 87/189 (46%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A      M+ +G+ PN   ++TL+ G    G I  A  +   M   G   N +TY+ 
Sbjct: 765 LDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDI 824

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GY K  +  E+L LY EM+SKG  P   TYN+L     +   +  A +LF EM+   
Sbjct: 825 LVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRG 884

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   +STY+  ++G  K     E   L + ++ L  +      S +     K G    A 
Sbjct: 885 VLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEAR 944

Query: 181 ELFQSLPRV 189
            L ++L +V
Sbjct: 945 RLLKTLFKV 953



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 39/186 (20%)

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQ--HSDVAAETSTYNTFIDGLCKNGY-------- 140
           +T N++      +H +  AL L          VAA+T +YN F+ GL + G+        
Sbjct: 81  LTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVL 140

Query: 141 ---------------------------IVEAAELFRTLRVLKC--ELGIEAYSCLIDGLC 171
                                      + EAA L   L   +    LG+  ++ LIDG C
Sbjct: 141 SEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYC 200

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K+  +  A  + + +   GL  +VV YN ++ GF   G  D A ++   M+A GV P+ V
Sbjct: 201 KVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVV 260

Query: 232 TFNTLM 237
           T  TL+
Sbjct: 261 THTTLI 266


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 132/245 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E   L   M ++G   +   Y+ +IDGFC +G++++A +L   M + G    VVTY ++
Sbjct: 596 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 655

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K   ++E+  L+ E  S GI+  VV Y++L  G  ++ +++ A  + +E+    +
Sbjct: 656 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGL 715

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+N  +D L K   I EA   F++++ LKC      YS LI+GLC++ K   A+ 
Sbjct: 716 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 775

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            +Q + ++GL PN +TY  MI G    G + +A  LF   +A G  P+  ++N ++ G  
Sbjct: 776 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLS 835

Query: 242 RNNET 246
             N+ 
Sbjct: 836 SANKA 840



 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 126/241 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+A  YS LI G    G  +   ELF +M   GC+ +   YN +I+G+CK+  V ++
Sbjct: 574 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 633

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L  EM  KG  PTVVTY ++  GL +I +++ A  LF+E + + +      Y++ IDG
Sbjct: 634 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 693

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
             K G I EA  +   L        +  ++CL+D L K  ++  A   FQS+  +   PN
Sbjct: 694 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 753

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY+I+I+G C   + +KA   + +M+  G+ PN +T+ T++ G  +     +   L  
Sbjct: 754 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFS 813

Query: 255 R 255
           R
Sbjct: 814 R 814



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 131/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + M+  G  P A VY++LI  F   G  +   +++  M   GC  ++   NT
Sbjct: 490 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  + E+   L+ E+ + G  P   +Y+ L HGL +        +LF  M+   
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T  YN  IDG CK+G + +A +L   ++V      +  Y  +IDGL KI +L+ A+
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 669

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G+  NVV Y+ +I GF   G++D+A+ +  ++  KG+ PN  T+N L+   
Sbjct: 670 MLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 729

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  E ++ +     M +
Sbjct: 730 VKAEEINEALICFQSMKD 747



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 120/239 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  + + M  +   PNA  +S+LIDG    G +D A  L+  M   G +   + Y +
Sbjct: 455 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTS 514

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  + K    E+   +Y EM+  G  P +   NT    +F+  + E    LF E+    
Sbjct: 515 LIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG 574

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y+  I GL K G   E  ELF  ++   C L   AY+ +IDG CK GK+  A+
Sbjct: 575 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 634

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +   G  P VVTY  +I G     ++D+A+ LF + ++ G+  N V +++L+ G
Sbjct: 635 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 693



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LLD M    +  +  +Y+  ID F   G++D + + F  M  +G M + VTY +
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I   CK   ++E++ L+ ++      P    YNT+  G     + + A  L +  +   
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  YN  +  L K   + EA  +F  ++       +  Y+ LID LC+ GKL  A 
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAAL 424

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + R GL PNV+T NIMI   C   ++++A  +F  M+ K   PN VTF++L+ G 
Sbjct: 425 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 484

Query: 241 IRNNETSKVVELLHRM 256
            +         L  +M
Sbjct: 485 GKCGRVDDAYSLYEKM 500



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 5/258 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D + +    M   G+ P+   Y+++I   C    +D A ELF  ++ N  +     YNT
Sbjct: 281 VDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNT 340

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GY      +E+  L     +KG  P+V+ YN +   L +  +VE AL++F+EM+  D
Sbjct: 341 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-D 399

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYN  ID LC+ G +  A E+   +        +   + +ID LCK  KLE A 
Sbjct: 400 AVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 459

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM--- 237
            +F+ +      PN VT++ +I G    G++D A+ L+  M   G  P  + + +L+   
Sbjct: 460 SIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSF 519

Query: 238 LGCIRNNETSKVV-ELLH 254
             C R  +  K+  E++H
Sbjct: 520 FKCGRKEDGHKIYKEMVH 537



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 126/253 (49%), Gaps = 1/253 (0%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L   M + G   N  +++TLI  F   G +D A  L   M  N    ++V YN  I+ + 
Sbjct: 217 LFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFG 276

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   V+ S   + EM S G+ P  VTY ++   L + ++++ A++LF++++ +       
Sbjct: 277 KAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAY 336

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            YNT I G    G   EA  L    +       + AY+C++  L K  ++E A  +F+ +
Sbjct: 337 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R  + PNV TYNI+I   C +G+++ A ++  DME  G+ PN +T N ++    +  + 
Sbjct: 397 KRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 455

Query: 247 SKVVELLHRMDER 259
            +   +   MD++
Sbjct: 456 EEACSIFEGMDDK 468



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 111/225 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +LL+ M  +G  P    Y ++IDG      +D A  LF     NG   NVV Y++
Sbjct: 630 VNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 689

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   ++E+  +  E++ KG+ P V T+N L   L +  ++  AL  F  M+   
Sbjct: 690 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 749

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  I+GLC+     +A   ++ ++ L  +     Y+ +I GL K G +  A 
Sbjct: 750 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEAS 809

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            LF      G +P+  +YN MI G  +  +   A+ LF +   KG
Sbjct: 810 GLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKG 854



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 130/256 (50%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+ + M +R   PN   Y+ LID  C  G+++ A E+   M+  G   NV+T N 
Sbjct: 386 VEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNI 444

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + +EE+ +++  M  K   P  VT+++L  GL +  +V+ A  L+++M    
Sbjct: 445 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 504

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y + I    K G   +  ++++ +    C   +   +  +D + K G+ E   
Sbjct: 505 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGR 564

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G +P+  +Y+I+IHG    G  ++ ++LF  M+ +G   +   +N ++ G 
Sbjct: 565 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 624

Query: 241 IRNNETSKVVELLHRM 256
            ++ + +K  +LL  M
Sbjct: 625 CKSGKVNKAYQLLEEM 640



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 124/257 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++  ++   M+  G  P+  + +T +D     GE ++ R LF  ++ +G + +  +Y+ L
Sbjct: 526 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL 585

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     E+  L+  M  +G       YN +  G  +  +V  A +L +EM+    
Sbjct: 586 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 645

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY + IDGL K   + EA  LF   +    +L +  YS LIDG  K+G+++ A+ 
Sbjct: 646 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYL 705

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           + + L + GL PNV T+N ++       ++++A   F  M+     PN +T++ L+ G  
Sbjct: 706 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLC 765

Query: 242 RNNETSKVVELLHRMDE 258
           R  + +K       M +
Sbjct: 766 RVRKFNKAFVFWQEMQK 782



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 92/179 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +++ ++Q+G+ PN + ++ L+D      EI+ A   F SM    C  N +TY+ 
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+ +   ++   + EM   G++P  +TY T+  GL +   +  A  LF   + + 
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 819

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
              ++++YN  I+GL      ++A  LF   R+  C +  +    L+D L K   LE A
Sbjct: 820 GIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 100/238 (42%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
            Y++L+       E D    +   M ++G   +      L+    K++ + E+ ++   M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 82  LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
                RP    Y  L   L E+ + +  L LF +MQ          + T I    + G +
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
             A  L   ++    +  I  Y+  ID   K GK++ +W+ F  +   GLMP+ VTY  M
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           I   C   ++D+A +LF  +E     P    +NT+++G     +  +   LL R   +
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK 364



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   YS LI+G C   + ++A   +  M   G   N +TY T+I+G  K  ++ E+  L
Sbjct: 752 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 811

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +S   + G  P   +YN +  GL   ++   A  LF+E +       T T    +D L K
Sbjct: 812 FSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK 871

Query: 138 NGYIVEAA 145
              + +AA
Sbjct: 872 AECLEQAA 879


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 135/243 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + + M++RGV P+A +Y+ L+ G C   ++  A+ L   M     + +   Y T
Sbjct: 430 VDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYAT 489

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+ +  +++E+  L+   + KG+ P +V YN +  G  +   ++ A+   + M+   
Sbjct: 490 LVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH 549

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +  TY+T IDG  K   +  A ++FR +  +KC+  +  Y+ LI+G C+ G L  + 
Sbjct: 550 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSL 609

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F+ +   GL+PNVVTY+I+I  FC + ++  A   F +M      PN VTFN L+ G 
Sbjct: 610 KIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGF 669

Query: 241 IRN 243
            +N
Sbjct: 670 SKN 672



 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 125/239 (52%), Gaps = 2/239 (0%)

Query: 23  YST--LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           YST  ++ G C  G+++  R+L       GC+ N++ YNTLI+GYCK  D+E +  L+ E
Sbjct: 205 YSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIE 264

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           +  KG  PTV TY  + +G  +    +   +L  EM    +      YNT ID   K+G+
Sbjct: 265 LKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 324

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           IV+A E    +    C+  I  Y+ LI G C+ GK+  A +L +     GLMPN  +Y  
Sbjct: 325 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 384

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +IH +C  G  D+A +  ++M  +G  P+ VT+  L+ G +   E    + +  +M ER
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLER 443



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 125/257 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL+  + +G+ PN F Y+ LI  +C  G  DRA    + M   G   ++VTY  
Sbjct: 360 VSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGA 419

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G     +V+ +L +  +ML +G+ P    YN L  GL +  ++  A  L  EM    
Sbjct: 420 LVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS 479

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   Y T +DG  +NG + EA +LF          GI  Y+ +I G CK G ++ A 
Sbjct: 480 VLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAM 539

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                + +  L P+  TY+ +I G+     +D A  +F +M      PN VT+ +L+ G 
Sbjct: 540 ACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGF 599

Query: 241 IRNNETSKVVELLHRMD 257
            R  +  + +++   M 
Sbjct: 600 CRKGDLHRSLKIFREMQ 616



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 134/273 (49%), Gaps = 14/273 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  LL  M+ + V P+AFVY+TL+DGF   G +D AR+LF      G    +V YN 
Sbjct: 465 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 524

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I GYCK   +++++   + M  + + P   TY+T+  G  + H ++ A K+F EM    
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY + I+G C+ G +  + ++FR ++       +  YS LI   CK  KL  A 
Sbjct: 585 CKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAA 644

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ----------MDKAHDLFLD----MEAKGV 226
             F+ +     +PN VT+N +++GF  +G            +    +FL+    M + G 
Sbjct: 645 SFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGW 704

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           AP    +N++++   +       ++L ++M  +
Sbjct: 705 APRSAAYNSILICLCQYGMFRTALQLSNKMTSK 737



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L++    +G  PN   Y+TLIDG+C  G+++ A  LF+ + + G +  V TY  
Sbjct: 220 LEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGA 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK  D +    L  EM S+G+   V  YNT+    ++   +  A++  + M    
Sbjct: 280 IINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECG 339

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYNT I G C++G + EA +L              +Y+ LI   CK G  + A 
Sbjct: 340 CKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRAS 399

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +   G  P++VTY  ++HG    G++D A  +   M  +GV P+   +N LM G 
Sbjct: 400 NWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 459

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL  M
Sbjct: 460 CKKFKLPAAKLLLAEM 475



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 17/267 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L +L I++G+ P    Y+ +I G+C  G +  A      M       +  TY+T
Sbjct: 500 LDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYST 559

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY K  D++ +  ++ EM+    +P VVTY +L +G      +  +LK+F EMQ   
Sbjct: 560 VIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACG 619

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG------ 174
           +     TY+  I   CK   +++AA  F  + + KC      ++ L++G  K G      
Sbjct: 620 LVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISE 679

Query: 175 --------KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
                   K       F  +   G  P    YN ++   C  G    A  L   M +KG 
Sbjct: 680 KGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGC 739

Query: 227 APNCVTFNTLMLG-CI--RNNETSKVV 250
            P+ V+F  L+ G C+  R+ E   +V
Sbjct: 740 IPDSVSFVALLHGVCLEGRSKEWKNIV 766



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 8/259 (3%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RLL  M  RG+  N  VY+T+ID     G I +A E    M   GC  ++VTYNTLI+G 
Sbjct: 295 RLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGS 354

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C+   V E+  L  + L KG+ P   +Y  L H   +    + A     EM       + 
Sbjct: 355 CRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDL 414

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKLETAWE 181
            TY   + GL   G +    ++  T+R    E G+      Y+ L+ GLCK  KL  A  
Sbjct: 415 VTYGALVHGLVVAGEV----DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKL 470

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +    ++P+   Y  ++ GF  +G +D+A  LF     KG+ P  V +N ++ G  
Sbjct: 471 LLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYC 530

Query: 242 RNNETSKVVELLHRMDERN 260
           +       +  ++RM +R+
Sbjct: 531 KFGMMKDAMACINRMKKRH 549



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 5/245 (2%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N F YS+L+     +        +  +M +          + +I  Y  +  VE++L LY
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 79  SEMLSKGIR-PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE--TSTYNT--FID 133
             +L      P V+  N+L + L ++ ++E A KL+DEM   D A +     Y+T   + 
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           GLCK G + E  +L        C   I  Y+ LIDG CK G +E A  LF  L   G +P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
            V TY  +I+GFC  G       L ++M ++G+  N   +NT++    ++    K VE +
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 254 HRMDE 258
             M E
Sbjct: 333 EGMIE 337


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 130/250 (52%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L++ M++ G  PN   ++TLI   C  G  +R  ++   M  +GC  ++  Y T+++G C
Sbjct: 247 LMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVC 306

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K   +E +  +   M S G++P VV YNT+  GL    + E A +L  EM  +D   +  
Sbjct: 307 KEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDV 366

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+N  +D  C+NG +    EL   +    C   +  Y+ +I+G CK G ++ A  L +S+
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  PN ++Y I++ G C+  +   A DL   M  +G +PN VTFNT++    +    
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486

Query: 247 SKVVELLHRM 256
            + +ELL +M
Sbjct: 487 EQAIELLKQM 496



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 129/255 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  LL  M       +   ++ L+D FC  G + R  EL   M  +GC+ +V+TY T+
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING+CK   ++E++ L   M + G RP  ++Y  +  GL    +   A  L  +M     
Sbjct: 407 INGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGC 466

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +    T+NT I+ LCK G + +A EL + + +  C   + +YS +IDGL K GK + A E
Sbjct: 467 SPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALE 526

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +   G+ PN + Y+ +      +G++++   +F +++   +  + V +N ++    
Sbjct: 527 LLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLC 586

Query: 242 RNNETSKVVELLHRM 256
           +   T + +E L  M
Sbjct: 587 KRGGTDRAIEFLAYM 601



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++L  M+  G  P+  +Y+T++DG C  G ++ A E+   M   G   NVV YNT++ G 
Sbjct: 281 QVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGL 340

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C  +  E++  L +EM         VT+N L     +   V   ++L ++M       + 
Sbjct: 341 CSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDV 400

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
            TY T I+G CK G I EA  L +++    C     +Y+ ++ GLC   +   A +L   
Sbjct: 401 ITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQ 460

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           +   G  PN VT+N +I+  C  G +++A +L   M   G +P+ ++++T++ G  +  +
Sbjct: 461 MIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGK 520

Query: 246 TSKVVELLHRM 256
           T + +ELL+ M
Sbjct: 521 TDEALELLNVM 531



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 124/250 (49%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL+ M++ G  P+   Y+T+I+GFC  G ID A  L  SM   GC  N ++Y  ++ G C
Sbjct: 387 LLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLC 446

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             +   ++ +L S+M+ +G  P  VT+NT+ + L +   VE A++L  +M  +  + +  
Sbjct: 447 SAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLI 506

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           +Y+T IDGL K G   EA EL   +           YS +   L K G++    ++F ++
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
             V +  + V YN +I   C  G  D+A +    M + G  PN  T+  L+ G       
Sbjct: 567 QDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFV 626

Query: 247 SKVVELLHRM 256
            +  E+L  +
Sbjct: 627 KEAQEMLTEL 636



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 115/225 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  M   G RPN   Y+ ++ G C       A +L   M   GC  N VT+NT
Sbjct: 416 IDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNT 475

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK   VE+++ L  +ML  G  P +++Y+T+  GL +  + + AL+L + M +  
Sbjct: 476 VINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 535

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++  T  Y++    L K G I    ++F  ++ +        Y+ +I  LCK G  + A 
Sbjct: 536 MSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAI 595

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
           E    +   G MPN  TY I+I G  ++G + +A ++  ++ +KG
Sbjct: 596 EFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 130/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  +LD M   G++PN   Y+T++ G C     ++A EL   M  N C  + VT+N 
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNI 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +C+   V   + L  +ML  G  P V+TY T+ +G  +   ++ A+ L   M    
Sbjct: 371 LVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T +Y   + GLC     V+A +L   +    C      ++ +I+ LCK G +E A 
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAI 490

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL + +   G  P++++Y+ +I G    G+ D+A +L   M  KG++PN + ++++    
Sbjct: 491 ELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 550

Query: 241 IRNNETSKVVELLHRMDE 258
            +    ++V+++   + +
Sbjct: 551 SKEGRINRVIQMFDNIQD 568



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 5/261 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFC---LTGEIDRARELFVSMDINGCMHNVVTYN 59
           +A  +LD M +RG  P   +Y  +++  C     G    A  +   +   GC  +V   N
Sbjct: 133 DALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCN 192

Query: 60  TLINGYC-KTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
            ++N  C +   V+E+L L  ++  S G  P VV+YN +  GL    +      L +EM 
Sbjct: 193 LVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV 252

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
                    T+NT I  LC+NG      ++   +    C   I  Y+ ++DG+CK G LE
Sbjct: 253 RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLE 312

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+   +P  GL PNVV YN ++ G C+  + ++A +L  +M       + VTFN L+
Sbjct: 313 VAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILV 372

Query: 238 LGCIRNNETSKVVELLHRMDE 258
               +N    +V+ELL +M E
Sbjct: 373 DFFCQNGLVYRVIELLEQMLE 393



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 8/204 (3%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           YN +++GYC+   +  +  L +   S  + P   TY  +   L    ++  AL + DEM+
Sbjct: 86  YNAMVSGYCRAGQLASARRLAA---SVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK---CELGIEAYSCLIDGLC-KI 173
               A     Y+  ++  C  G         R L+ L    C L +   + +++ +C + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 174 GKLETAWELFQSLP-RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
           G ++ A  L + LP   G  P+VV+YN ++ G C   +  +  DL  +M   G  PN VT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 233 FNTLMLGCIRNNETSKVVELLHRM 256
           FNTL+    RN    +V ++L +M
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQM 286


>gi|334183970|ref|NP_177858.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332197845|gb|AEE35966.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 402

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 134/262 (51%), Gaps = 9/262 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  RL   M++  V P+ + ++TL++G+C  G +  A++    +   GC  +  TY +
Sbjct: 136 VEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTS 195

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I G+C+ K+V+ +  ++ EM   G     V+Y  L +GLFE  +++ AL L  +M+  +
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN 255

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKL 176
                 TY   ID LC +G   EA  LF+ +     E GI+     Y+ LI   C    L
Sbjct: 256 CCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS----ESGIKPDDCMYTVLIQSFCSGDTL 311

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A  L + +   GLMPNV+TYN +I GFC    + KA  L   M  + + P+ +T+NTL
Sbjct: 312 DEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTL 370

Query: 237 MLGCIRNNETSKVVELLHRMDE 258
           + G   +        LL  M+E
Sbjct: 371 IAGQCSSGNLDSAYRLLSLMEE 392



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 1/238 (0%)

Query: 23  YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
           Y+ L+      G ++  + L+  M  +    ++ T+NTL+NGYCK   V E+    + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182

Query: 83  SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
             G  P   TY +   G     +V+ A K+F EM  +       +Y   I GL +   I 
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242

Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
           EA  L   ++   C   +  Y+ LID LC  G+   A  LF+ +   G+ P+   Y ++I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302

Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             FC+   +D+A  L   M   G+ PN +T+N L+ G  + N   K + LL +M E+N
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQN 359



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 1/126 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA  L   M + G++P+  +Y+ LI  FC    +D A  L   M  NG M NV+TYN L
Sbjct: 277 SEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNAL 336

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G+CK K+V +++ L S+ML + + P ++TYNTL  G      ++ A +L   M+ S +
Sbjct: 337 IKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395

Query: 122 AAETST 127
                T
Sbjct: 396 VPNQRT 401



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 5/115 (4%)

Query: 149 RTLRV-----LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           RT+R      +K +L  + Y+ L+  L + G +E    L+  +    + P++ T+N +++
Sbjct: 104 RTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVN 163

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           G+C  G + +A      +   G  P+  T+ + + G  R  E     ++   M +
Sbjct: 164 GYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQ 218


>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 132/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E   LL ++ Q+ + P++F Y+ L  G    G++  A +L + +   GC  +V  YN   
Sbjct: 346 EIGELLQVIDQKEISPDSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYF 405

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  C+     E+L+L   M+ KG+ PT V+YNT+ +G    + ++ AL+LFD  + ++ +
Sbjct: 406 HCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNS 465

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  ++NT +   CK G       +   +     +L + + +CLI   C IGK+    EL
Sbjct: 466 PDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLEL 525

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            +S+ R GL P VVT+N+++   C +G +  AH +F +    G  PN  ++N L+   IR
Sbjct: 526 LESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIR 585

Query: 243 NNETSKVVELLHRM 256
               S V +LL  M
Sbjct: 586 EGNDSLVEQLLRDM 599



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 126/254 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  + + G   NA  Y+ L+ GF   G  + A  +   M I+GC  NV+TY  ++ 
Sbjct: 242 ALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVK 301

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    + ++L++  +M  +G  P +VTYN +   LF   +     +L   +   +++ 
Sbjct: 302 FLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISP 361

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           ++ TY     GL K G +  A +L   +    C + +  Y+     LC+  K   A  L 
Sbjct: 362 DSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLL 421

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           QS+   GL+P  V+YN +++GFC +  +D+A  LF   E    +P+ V+FNT++    + 
Sbjct: 422 QSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQ 481

Query: 244 NETSKVVELLHRMD 257
             +S +  +L+RM+
Sbjct: 482 GNSSMIRRVLYRME 495



 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 118/254 (46%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  LL  M+++G+ P    Y+T+++GFC    ID A +LF   +      +VV++NT++
Sbjct: 416 EALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTIL 475

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +  CK  +      +   M  +G++  VV+   L      I ++   L+L + M  + + 
Sbjct: 476 SAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLN 535

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N  +D LCKNG +  A  +FR  R         +Y+ LI    + G      +L
Sbjct: 536 PTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQL 595

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + +    L P+ VTY   I G C +G++  A  L   M   G+ P    +NT++    +
Sbjct: 596 LRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQ 655

Query: 243 NNETSKVVELLHRM 256
             +   +V LL  M
Sbjct: 656 RGKFWDIVSLLKDM 669



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 114/258 (44%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +  +++ +G    A  Y+ ++   C  G+   A  L  S+   G +HN  +Y  L+
Sbjct: 206 EAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALV 265

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+ K    EE+  +  EM   G +P V+TY  +   L +  ++  AL +  +M      
Sbjct: 266 YGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCD 325

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TYN  +  L      VE  EL + +   +       Y+ L  GL K G++  A +L
Sbjct: 326 PDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRGQVRVANKL 385

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G   +V  YNI  H  C + +  +A  L   M  KG+ P  V++NT++ G  R
Sbjct: 386 LLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCR 445

Query: 243 NNETSKVVELLHRMDERN 260
            N   + ++L    +  N
Sbjct: 446 ENHIDEALQLFDHFEWAN 463



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 117/259 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  ++   M + G  PNA  ++ L+DG   TG +  A      M  +G + +  +   
Sbjct: 99  LDELVQVYFGMKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLK 158

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++  +     + +S++++  ML     PT  T N L   L +      A  +F  +    
Sbjct: 159 ILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKG 218

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 +YN  +  LCK G    A  L  +L+ +       +Y+ L+ G  K G  E A+
Sbjct: 219 CLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAF 278

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +   +   G  PNV+TY +++   C++G++  A D+   M  +G  P+ VT+N ++   
Sbjct: 279 CMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILREL 338

Query: 241 IRNNETSKVVELLHRMDER 259
              +   ++ ELL  +D++
Sbjct: 339 FHQDRYVEIGELLQVIDQK 357


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 135/254 (53%), Gaps = 4/254 (1%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           L+D M++ G++ + F  +TL+   C     + A EL  S    G + + V+Y T++  Y 
Sbjct: 443 LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYF 502

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K    E +L L+ EM  + + P++ TYNTL  GL  I ++  A+   +E+    +  + +
Sbjct: 503 KENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDT 562

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQ 184
           TYN  I   CK G + +A +     ++L+     +  +C  L++GLC  GKLE A +LF+
Sbjct: 563 TYNIIIHAYCKEGDLEKAFQFHN--KMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFE 620

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
           S    G   +V+TYN +I   C DG +D A   F DMEA+G+ P+  T+N ++       
Sbjct: 621 SWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 680

Query: 245 ETSKVVELLHRMDE 258
            + +   +LH++DE
Sbjct: 681 RSEEAQNMLHKLDE 694



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 127/260 (48%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A   L  M   G+ P+   Y+TL+   C  G +  AR L   M   G      TYNT
Sbjct: 226 LADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNT 285

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH-S 119
           L++ Y +   ++++ N+   M + G  P + TYN L  GL +  +V+ A KL DEM+H S
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLS 345

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V+ +  TYNT +D   K     +A  L   +R    +  +  ++ ++ GLC+ G+LE A
Sbjct: 346 IVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEA 405

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
               + +   GL P+V+TYN +I  +C    + KA  L  +M   G+  +  T NTL+  
Sbjct: 406 LGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 465

Query: 240 CIRNNETSKVVELLHRMDER 259
             +     +  ELL    +R
Sbjct: 466 LCKEKRYEEAEELLRSPPQR 485



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 129/295 (43%), Gaps = 36/295 (12%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA +L D M     V P+   Y+TL+D          A  L   M   G   ++VT+N
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            ++ G C+   +EE+L     M  +G+ P V+TYNTL     +   V  A  L DEM  S
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRT----------------------------- 150
            +  +T T NT +  LCK     EA EL R+                             
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPA 510

Query: 151 ------LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
                 +   K    I  Y+ LI GLC IGKL  A +    L + GL+P+  TYNI+IH 
Sbjct: 511 LYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHA 570

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +C +G ++KA      M      P+ VT NTLM G   + +  K ++L     E+
Sbjct: 571 YCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK 625



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M + G+ P    Y+TL+  +   G I +A  +  +M   G   ++ TYN 
Sbjct: 261 LGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNV 320

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L  G C+   V+E+  L  EM    I  P VVTYNTL    F+  +   AL L +EM+  
Sbjct: 321 LAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDK 380

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V +   T+N  + GLC+ G + EA    + +        +  Y+ LID  CK   +  A
Sbjct: 381 GVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKA 440

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L   + R GL  +  T N +++  C + + ++A +L      +G  P+ V++ T+M  
Sbjct: 441 FVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAA 500

Query: 240 CIRNNETSKVVELLHRMDERN 260
             + N+    + L   M +R 
Sbjct: 501 YFKENKPEPALYLWDEMSKRK 521



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +I   + PN + ++ L+   C  G +  A     +M   G   +VVTYNTL+  +C+   
Sbjct: 201 LIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGM 260

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E+  L + M  +GI PT  TYNTL      +  ++ A  + + M       +  TYN 
Sbjct: 261 LGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNV 320

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
              GLC+ G + EA +L   +  L      +  Y+ L+D   K  +   A  L + +   
Sbjct: 321 LAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDK 380

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+  ++VT+NI++ G C +GQ+++A      M  +G+AP+ +T+NTL+    +    +K 
Sbjct: 381 GVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKA 440

Query: 250 VELLHRM 256
             L+  M
Sbjct: 441 FVLMDEM 447



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 113/224 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +EA  LL    QRG  P+   Y T++  +    + + A  L+  M       ++ TYNTL
Sbjct: 473 EEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTL 532

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I G C    + E+++  +E++ KG+ P   TYN + H   +   +E A +  ++M  +  
Sbjct: 533 IKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYF 592

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T NT ++GLC +G + +A +LF +      ++ +  Y+ LI  LCK G ++TA  
Sbjct: 593 KPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALH 652

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            F  +   GL P+  TYN+++      G+ ++A ++   ++  G
Sbjct: 653 FFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 36/280 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A  L D M +R + P+ + Y+TLI G C  G++  A +    +   G + +  TYN +
Sbjct: 508 EPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNII 567

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ YCK  D+E++   +++ML    +P VVT NTL +GL    ++E A+KLF+       
Sbjct: 568 IHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGK 627

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYNT I  LCK+G +  A   F  +     +     Y+ ++  L + G+ E A  
Sbjct: 628 KVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQN 687

Query: 182 LFQSLPRVGLM---------------------PNVV---------------TYNIMIHGF 205
           +   L   G +                     P V                +YN  +   
Sbjct: 688 MLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKEL 747

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
           C  GQ+ +A  +  +M  KG++ +  T+ TLM G I+  +
Sbjct: 748 CVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 1/189 (0%)

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           + SL+++  +++  + P   T+N L H       +  AL     MQ   ++ +  TYNT 
Sbjct: 192 QASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTL 251

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           +   C+ G + EA  L   ++          Y+ L+    ++G ++ A  + +++   G 
Sbjct: 252 LKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGF 311

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTLMLGCIRNNETSKVV 250
            P++ TYN++  G C  G++D+A  L  +ME    V+P+ VT+NTL+  C +   +S  +
Sbjct: 312 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDAL 371

Query: 251 ELLHRMDER 259
            LL  M ++
Sbjct: 372 NLLEEMRDK 380



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 36/214 (16%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +  + M++   +P+    +TL++G CL G++++A +LF S    G   +V+TYNT
Sbjct: 577 LEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNT 636

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI   CK  DV+ +L+ +++M ++G++P   TYN +   L E  + E A  +  ++  S 
Sbjct: 637 LIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696

Query: 121 VAAE------------------------------------TSTYNTFIDGLCKNGYIVEA 144
             +E                                      +YN  +  LC  G + EA
Sbjct: 697 KLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEA 756

Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
             +   +      +    Y  L++GL K  K +T
Sbjct: 757 KAVLDEMMQKGMSVDSSTYITLMEGLIKRQKRQT 790


>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
          Length = 547

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 142/259 (54%), Gaps = 2/259 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNT 60
            +A  L++ M + G  P+   ++ L+DG C   ++++  E+   +  +G CM N VTY +
Sbjct: 232 QKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTS 291

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GYCK   +E+++++Y++ML  G RP  VTYN L +G  +   +E A++++ ++    
Sbjct: 292 VISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRH 351

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T+++ IDG C+ G + +A  +++ + +   +  +  +S +I  LCK  +   A 
Sbjct: 352 CPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEAL 411

Query: 181 ELFQSLP-RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ + L  R  + P    YN +I   C  G++D+A+ +  DM+ KG  P+  T+  L++G
Sbjct: 412 DILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIG 471

Query: 240 CIRNNETSKVVELLHRMDE 258
                   + + L H+M E
Sbjct: 472 HCMKGRIPEAITLFHKMVE 490



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 120/233 (51%), Gaps = 1/233 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++A  + + M++ G RPN   Y+ LI+G+    +++ A  ++  + +  C  +VVT+++
Sbjct: 302 MEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSS 361

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ-HS 119
           LI+GYC+   ++++  ++ EM    I+P V T++ + H L + ++   AL +  E+   +
Sbjct: 362 LIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRT 421

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           D+A +T  YN  ID LCK G + EA  +   ++   C      Y+ LI G C  G++  A
Sbjct: 422 DIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEA 481

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
             LF  +   G  P+ +T N  +      G  ++   + L     G+A   V+
Sbjct: 482 ITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIMLIASGHGLASQKVS 534



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 5/244 (2%)

Query: 3   EASRLLDLMI-QRGVRPNAFVYSTLIDGFCL-TGEIDRARELFVSMDINGCMHNVVTYNT 60
           +A +L D M+ Q G  P A  +S  + G C   G +D A  L       GC      YN 
Sbjct: 126 DALKLFDQMMDQSGYLPEAGFFS-FVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNY 184

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L+N        ++++ L+   +  G+  P V ++N +  G+  +   + AL+L + M   
Sbjct: 185 LLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEF 244

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLET 178
             + +T T+N  +DGLC+   + +  E+ R L R   C      Y+ +I G CK GK+E 
Sbjct: 245 GCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMED 304

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           A  ++  +   G  PN VTYN++I+G+     M+ A  ++  +  +   P+ VTF++L+ 
Sbjct: 305 AMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLID 364

Query: 239 GCIR 242
           G  R
Sbjct: 365 GYCR 368



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 4/190 (2%)

Query: 73  ESLNLYSEMLSK--GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +L ++S + S    + P+  +Y  +   L    +   ALKLFD+M         + + +
Sbjct: 89  SALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFS 148

Query: 131 FIDGLCKNGYIVEAAE-LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           F+ G C N  +++AA  L      L C +   AY+ L++ L   G+ + A  LF+S  + 
Sbjct: 149 FVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQD 208

Query: 190 GLM-PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
           GL  P+V ++N++I G C  G   KA +L   M   G +P+ +T N L+ G  R  + +K
Sbjct: 209 GLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNK 268

Query: 249 VVELLHRMDE 258
             E+L R+  
Sbjct: 269 GHEVLRRLQR 278


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 132/245 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           +E   L   M ++G   +   Y+ +IDGFC +G++++A +L   M + G    VVTY ++
Sbjct: 351 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 410

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K   ++E+  L+ E  S GI+  VV Y++L  G  ++ +++ A  + +E+    +
Sbjct: 411 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGL 470

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+N  +D L K   I EA   F++++ LKC      YS LI+GLC++ K   A+ 
Sbjct: 471 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 530

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            +Q + ++GL PN +TY  MI G    G + +A  LF   +A G  P+  ++N ++ G  
Sbjct: 531 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLS 590

Query: 242 RNNET 246
             N+ 
Sbjct: 591 SANKA 595



 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 126/241 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+A  YS LI G    G  +   ELF +M   GC+ +   YN +I+G+CK+  V ++
Sbjct: 329 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 388

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L  EM  KG  PTVVTY ++  GL +I +++ A  LF+E + + +      Y++ IDG
Sbjct: 389 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 448

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
             K G I EA  +   L        +  ++CL+D L K  ++  A   FQS+  +   PN
Sbjct: 449 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 508

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            +TY+I+I+G C   + +KA   + +M+  G+ PN +T+ T++ G  +     +   L  
Sbjct: 509 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFS 568

Query: 255 R 255
           R
Sbjct: 569 R 569



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 131/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + M+  G  P A VY++LI  F   G  +   +++  M   GC  ++   NT
Sbjct: 245 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 304

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  + E+   L+ E+ + G  P   +Y+ L HGL +        +LF  M+   
Sbjct: 305 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 364

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T  YN  IDG CK+G + +A +L   ++V      +  Y  +IDGL KI +L+ A+
Sbjct: 365 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 424

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+     G+  NVV Y+ +I GF   G++D+A+ +  ++  KG+ PN  T+N L+   
Sbjct: 425 MLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 484

Query: 241 IRNNETSKVVELLHRMDE 258
           ++  E ++ +     M +
Sbjct: 485 VKAEEINEALICFQSMKD 502



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 120/239 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  + + M  +   PNA  +S+LIDG    G +D A  L+  M   G +   + Y +
Sbjct: 210 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTS 269

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  + K    E+   +Y EM+  G  P +   NT    +F+  + E    LF E+    
Sbjct: 270 LIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG 329

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y+  I GL K G   E  ELF  ++   C L   AY+ +IDG CK GK+  A+
Sbjct: 330 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 389

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +   G  P VVTY  +I G     ++D+A+ LF + ++ G+  N V +++L+ G
Sbjct: 390 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 448



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 1/257 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + + Q    P A+ Y+T+I G+   G+ D A  L       G + +V+ YN 
Sbjct: 71  LDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNC 130

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++    K + VEE+L ++ EM    + P V TYN L   L    ++  AL++ D+M+ + 
Sbjct: 131 ILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAG 189

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T N  ID LCK   + EA  +F  +    C      +S LIDGL K G+++ A+
Sbjct: 190 LFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAY 249

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ +   G +P  + Y  +I  F   G+ +  H ++ +M   G +P+    NT M   
Sbjct: 250 SLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCV 309

Query: 241 IRNNETSKVVELLHRMD 257
            +  ET K   L   ++
Sbjct: 310 FKAGETEKGRALFREIN 326



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 111/225 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +LL+ M  +G  P    Y ++IDG      +D A  LF     NG   NVV Y++
Sbjct: 385 VNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 444

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   ++E+  +  E++ KG+ P V T+N L   L +  ++  AL  F  M+   
Sbjct: 445 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 504

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY+  I+GLC+     +A   ++ ++ L  +     Y+ +I GL K G +  A 
Sbjct: 505 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEAS 564

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            LF      G +P+  +YN MI G  +  +   A+ LF +   KG
Sbjct: 565 GLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKG 609



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 130/256 (50%), Gaps = 1/256 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+ + M +R   PN   Y+ LID  C  G+++ A E+   M+  G   NV+T N 
Sbjct: 141 VEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNI 199

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + +EE+ +++  M  K   P  VT+++L  GL +  +V+ A  L+++M    
Sbjct: 200 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 259

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y + I    K G   +  ++++ +    C   +   +  +D + K G+ E   
Sbjct: 260 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGR 319

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   G +P+  +Y+I+IHG    G  ++ ++LF  M+ +G   +   +N ++ G 
Sbjct: 320 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 379

Query: 241 IRNNETSKVVELLHRM 256
            ++ + +K  +LL  M
Sbjct: 380 CKSGKVNKAYQLLEEM 395



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 15/268 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDG----------FCLTGEIDRARELFVSMDING 50
           + EA  ++  M +   RP    Y+ LI             C    +D A ELF  ++ N 
Sbjct: 26  LREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNR 85

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
            +     YNT+I GY      +E+  L     +KG  P+V+ YN +   L +  +VE AL
Sbjct: 86  KVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEAL 145

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           ++F+EM+  D      TYN  ID LC+ G +  A E+   +        +   + +ID L
Sbjct: 146 RIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRL 204

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           CK  KLE A  +F+ +      PN VT++ +I G    G++D A+ L+  M   G  P  
Sbjct: 205 CKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA 264

Query: 231 VTFNTLM---LGCIRNNETSKVV-ELLH 254
           + + +L+     C R  +  K+  E++H
Sbjct: 265 IVYTSLIRSFFKCGRKEDGHKIYKEMVH 292



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 124/257 (48%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++  ++   M+  G  P+  + +T +D     GE ++ R LF  ++ +G + +  +Y+ L
Sbjct: 281 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL 340

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     E+  L+  M  +G       YN +  G  +  +V  A +L +EM+    
Sbjct: 341 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 400

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY + IDGL K   + EA  LF   +    +L +  YS LIDG  K+G+++ A+ 
Sbjct: 401 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYL 460

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           + + L + GL PNV T+N ++       ++++A   F  M+     PN +T++ L+ G  
Sbjct: 461 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLC 520

Query: 242 RNNETSKVVELLHRMDE 258
           R  + +K       M +
Sbjct: 521 RVRKFNKAFVFWQEMQK 537



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 92/179 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +++ ++Q+G+ PN + ++ L+D      EI+ A   F SM    C  N +TY+ 
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING C+ +   ++   + EM   G++P  +TY T+  GL +   +  A  LF   + + 
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 574

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
              ++++YN  I+GL      ++A  LF   R+  C +  +    L+D L K   LE A
Sbjct: 575 GIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 11/209 (5%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG----------LFEIHQVEHAL 110
           L+    K++ + E+ ++   M     RP    Y  L             L + ++++ A+
Sbjct: 16  LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAV 75

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
           +LF++++ +        YNT I G    G   EA  L    +       + AY+C++  L
Sbjct: 76  ELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCL 135

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
            K  ++E A  +F+ + R  + PNV TYNI+I   C +G+++ A ++  DME  G+ PN 
Sbjct: 136 GKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNV 194

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +T N ++    +  +  +   +   MD++
Sbjct: 195 LTVNIMIDRLCKAQKLEEACSIFEGMDDK 223



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%)

Query: 18  PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
           PN   YS LI+G C   + ++A   +  M   G   N +TY T+I+G  K  ++ E+  L
Sbjct: 507 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 566

Query: 78  YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
           +S   + G  P   +YN +  GL   ++   A  LF+E +       T T    +D L K
Sbjct: 567 FSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK 626

Query: 138 NGYIVEAA 145
              + +AA
Sbjct: 627 AECLEQAA 634


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 133/257 (51%), Gaps = 3/257 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+   L   M+++   PN   +  LI  FC  G ++RA ++   M  +GC  N    N +
Sbjct: 265 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIV 324

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN  CK   V+++  L ++M S G  P  ++Y T+  GL    + + A +L +EM  ++ 
Sbjct: 325 INSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNC 384

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+NTFI  LC+ G I +A  L   +    C +G+  Y+ L++G C  G +++A E
Sbjct: 385 PPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALE 444

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF+S+P     PN +TY  ++ G CN  ++D A +L  +M      PN VTFN L+    
Sbjct: 445 LFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFC 501

Query: 242 RNNETSKVVELLHRMDE 258
           +     + +EL+ +M E
Sbjct: 502 QKGFLEEAIELVEQMME 518



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 126/256 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LLD M++RG +PN   Y+ L++  C     ++A  +   M   GC  N+VTYN +I
Sbjct: 161 DALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVII 220

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C+   V+++  L + + S G +P  V+Y TL  GL    + +   +LF EM   +  
Sbjct: 221 NGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM 280

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T++  I   C+ G +  A ++   +    C       + +I+ +CK G+++ A++L
Sbjct: 281 PNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKL 340

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G  P+ ++Y  ++ G C   + D A +L  +M      PN VTFNT +    +
Sbjct: 341 LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ 400

Query: 243 NNETSKVVELLHRMDE 258
                + + L+ +M E
Sbjct: 401 KGLIEQAIMLIEQMSE 416



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 3/255 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A  LL+ M++    PN   ++T I   C  G I++A  L   M  +GC   VVTYN L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG+C    ++ +L L+  M  K   P  +TY TL  GL    +++ A +L  EM   D 
Sbjct: 430 VNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDC 486

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                T+N  +   C+ G++ EA EL   +    C   +  Y+ L+DG+ K    E A E
Sbjct: 487 PPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALE 546

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   L   G+ P+V+T++ +I     + ++++A  LF  ++  G+ P  V +N ++LG  
Sbjct: 547 LLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLC 606

Query: 242 RNNETSKVVELLHRM 256
           +  E    ++    M
Sbjct: 607 KRCEIDNAIDFFAYM 621



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A RL+  M    V P+A+ Y+ LI   C  G +  A  L   M   GC  NVVTY  
Sbjct: 127 LDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 183

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   C+    E+++ +  EM +KG  P +VTYN + +G+    +V+ A +L + +    
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +T +Y T + GLC +    +  ELF  +    C      +  LI   C+ G +E A 
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ + +   G   N    NI+I+  C  G++D A  L  DM + G  P+ +++ T++ G 
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363

Query: 241 IRNNETSKVVELLHRMDERN 260
            R        ELL+ M   N
Sbjct: 364 CRAERWDDAKELLNEMVRNN 383



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 130/290 (44%), Gaps = 38/290 (13%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A  +LD M  +G  PN   Y+ +I+G C  G +D AREL   +   G   + V+Y TL
Sbjct: 195 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTL 254

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           + G C +K  ++   L++EM+ K   P  VT++ L         VE A+++ ++M     
Sbjct: 255 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGC 314

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A  T+  N  I+ +CK G + +A +L   +    C     +Y+ ++ GLC+  + + A E
Sbjct: 315 ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374

Query: 182 LFQSLPRVGLMPN-----------------------------------VVTYNIMIHGFC 206
           L   + R    PN                                   VVTYN +++GFC
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC 434

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G +D A +LF  M  K   PN +T+ TL+ G           EL+  M
Sbjct: 435 VQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEM 481



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 121/254 (47%), Gaps = 3/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A+R+L      G   + F Y+TL+ G+C  G +D AR L  SM +     +  TY  LI
Sbjct: 94  DAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV---APDAYTYTPLI 150

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C    V ++L+L  +ML +G +P VVTY  L   +      E A+ + DEM+     
Sbjct: 151 RVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCT 210

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I+G+C+ G + +A EL   L     +    +Y+ L+ GLC   + +   EL
Sbjct: 211 PNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEEL 270

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +     MPN VT++++I  FC  G +++A  +   M   G A N    N ++    +
Sbjct: 271 FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICK 330

Query: 243 NNETSKVVELLHRM 256
                   +LL+ M
Sbjct: 331 QGRVDDAFKLLNDM 344



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 3/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L++ M + G       Y+ L++GFC+ G ID A ELF SM    C  N +TY T
Sbjct: 404 IEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTT 460

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G C  + ++ +  L +EML     P VVT+N L     +   +E A++L ++M    
Sbjct: 461 LLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG 520

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TYNT +DG+ K+    +A EL   L        +  +S +I  L K  ++E A 
Sbjct: 521 CTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAV 580

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +LF  +  +G+ P  V YN ++ G C   ++D A D F  M + G  PN  T+  L+ G
Sbjct: 581 QLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEG 639



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 3/244 (1%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G  P+ ++ + LI   C  G    A  +  + + +G   +V  YNTL+ GYC+   ++ +
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L   M    + P   TY  L   L +  +V  AL L D+M          TY   ++ 
Sbjct: 131 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           +C+N    +A  +   +R   C   I  Y+ +I+G+C+ G+++ A EL   LP  G  P+
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            V+Y  ++ G C   + D   +LF +M  K   PN VTF+ L+    R     + +++L 
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 255 RMDE 258
           +M E
Sbjct: 308 QMTE 311



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L+L      +PN   Y+TL+ G C    +D A EL   M    C  NVVT+N L++ +C+
Sbjct: 443 LELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQ 502

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
              +EE++ L  +M+  G  P ++TYNTL  G+ +    E AL+L   +    V+ +  T
Sbjct: 503 KGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVIT 562

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           +++ I  L K   I EA +LF  ++ +        Y+ ++ GLCK  +++ A + F  + 
Sbjct: 563 FSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMV 622

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
             G MPN  TY I+I G  ++G + +A DL   + ++GV
Sbjct: 623 SNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 101/192 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A+ L+  M++    PN   ++ L+  FC  G ++ A EL   M  +GC  N++TYNT
Sbjct: 471 LDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNT 530

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K    E++L L   ++SKG+ P V+T++++   L +  ++E A++LF  +Q   
Sbjct: 531 LLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIG 590

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YN  + GLCK   I  A + F  +    C      Y  LI+GL   G L+ A 
Sbjct: 591 MRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQ 650

Query: 181 ELFQSLPRVGLM 192
           +L   L   G++
Sbjct: 651 DLLSVLCSRGVL 662


>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           herrerae]
          Length = 395

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 124/222 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE  RL + M   GV+P+ + YS LI+G C   ++D A ELF  M   G + N VT+ T
Sbjct: 174 LDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 233

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK   V+ ++ +Y +MLS+ + P ++TYNTL +GL +   ++ A  L DEM    
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKG 293

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T IDG CK G +  A E  + +      L    Y+ LI GLC+ G+   A 
Sbjct: 294 LKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 353

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           ++ + +  VGL PN  TY ++I+ FC  G +     L  +M+
Sbjct: 354 KMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 130/234 (55%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + D + + G+RP+   ++TL++G+   G++D    L  +M  +G   +V TY+ LIN
Sbjct: 142 AQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLIN 201

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK   ++++  L+ EML KG+ P  VT+ TL  G  +  +V+ A++++ +M    ++ 
Sbjct: 202 GLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 261

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  TYNT   GLCK G + +A +L   + +   +     Y+ LIDG CK G +ETA+E  
Sbjct: 262 DLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQ 321

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + + +  +  + V Y  +I G C +G+   A  +  +M + G+ PN  T+  ++
Sbjct: 322 KRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMII 375



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 114/203 (56%)

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
           +N L++ +CK  D+  + +++  +   G+RP+VV++NTL +G   +  ++   +L + M 
Sbjct: 126 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMH 185

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            S V  +  TY+  I+GLCK   + +A ELF  +           ++ LIDG CK G+++
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 245

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A E+++ +    L P+++TYN + +G C  G + +AHDL  +M  KG+ P+ +T+ TL+
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 305

Query: 238 LGCIRNNETSKVVELLHRMDERN 260
            GC +  +     E   RM + N
Sbjct: 306 DGCCKEGDMETAFEHQKRMIQEN 328



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 131/246 (53%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           +++ G   + + ++ L+  FC  G+I  A+ +F ++   G   +VV++NTL+NGY +  D
Sbjct: 114 ILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGD 173

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++E   L + M + G++P V TY+ L +GL +  +++ A +LFDEM    +     T+ T
Sbjct: 174 LDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTT 233

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            IDG CKNG +  A E+++ +        +  Y+ L  GLCK G L+ A +L   +   G
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKG 293

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           L P+ +TY  +I G C +G M+ A +    M  + +  + V +  L+ G  +   +    
Sbjct: 294 LKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAE 353

Query: 251 ELLHRM 256
           ++L  M
Sbjct: 354 KMLREM 359


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L   M+   +  N  +Y+ LI GF  +G I++A ++   M  NGC  +VVTYN 
Sbjct: 352 VDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNI 411

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            +N YC T  ++E+  L  EM   GI  P   +YN +  GL + HQ++ A     +    
Sbjct: 412 RLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEV 471

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  + N  ID  CK   +  A +LF+ +     +     Y  LI+GL  +G    A
Sbjct: 472 GGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLA 531

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            E+F+ + +  ++PNV  YNIM+H  C  GQ ++A  +FL M  K V+P+ +TFNTL+  
Sbjct: 532 EEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYW 591

Query: 240 CIRNNETSKVVELLHRMDER 259
             + +   + ++L   M  R
Sbjct: 592 LGKCSRAIEAIDLFRDMTAR 611



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 1/249 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            D   +   + + +G    +F YS  I   C +  I+    L   MD  GC  ++   N 
Sbjct: 212 FDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNI 271

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++  CK   + ++L     M  +G  P VVTY T+   L +  Q   A++L++EM    
Sbjct: 272 YVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRG 331

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +       I GLCK+  + EA EL   +  L  EL +  Y+ LI G  + G +  A+
Sbjct: 332 LKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAF 391

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA-PNCVTFNTLMLG 239
           ++   +   G  P+VVTYNI ++ +CN G + +A  L  +ME  G+  P+  ++N ++ G
Sbjct: 392 KIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKG 451

Query: 240 CIRNNETSK 248
             + ++  +
Sbjct: 452 LCKAHQLDR 460



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 124/229 (54%), Gaps = 5/229 (2%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVS--MDINGCMHNVVT 57
           + EA +L++ M   G V P+ + Y+ ++ G C   ++DRA   FVS  M++ G   ++V+
Sbjct: 422 IKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFG-FVSDHMEVGG-FCDIVS 479

Query: 58  YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
            N LI+ +CK K V  +L L+ EM  KGI+   VTY TL +GL+ +     A ++F++M 
Sbjct: 480 CNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQML 539

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            + V    + YN  +  LCK G   +A ++F  +   +    I  ++ LI  L K  +  
Sbjct: 540 KARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAI 599

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
            A +LF+ +   G+ P+ +T+  +I G   +G+  +A++++  M   G+
Sbjct: 600 EAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGI 648



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 113/252 (44%)

Query: 5   SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
           S  L+ +  +GV  +  +Y  L+ G+   G+ D     F  M  +GC    V YN  I  
Sbjct: 146 SEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGV 205

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
             K    +     YS  L KG   T  TY+     L +  ++E   +L  +M       +
Sbjct: 206 LVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPD 265

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
               N ++D LCK+  + +A +    + +      +  Y+ ++  LC   +   A EL++
Sbjct: 266 IWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWE 325

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            + R GL P++V   ++I G C   ++D+A +L L M +  +  N   +N L+ G +R+ 
Sbjct: 326 EMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSG 385

Query: 245 ETSKVVELLHRM 256
             +K  +++  M
Sbjct: 386 SINKAFKIISVM 397



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 2/235 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF-VSMDINGCMHNVVTYN 59
            D      D M+  G R     Y+  I         D   + + V++D   C+ +  TY+
Sbjct: 177 FDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVALDKGFCLTSF-TYS 235

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
             I+  C+++ +E    L ++M   G  P +   N     L + +++  ALK  + M   
Sbjct: 236 RWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDALKTLENMWIR 295

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
               +  TY T +  LC N    EA EL+  +     +  I A   LI GLCK  K++ A
Sbjct: 296 GTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEA 355

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
           +EL   +  + L  NV  YN +I GF   G ++KA  +   M   G  P+ VT+N
Sbjct: 356 FELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYN 410



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 69/135 (51%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  + + M++  V PN  +Y+ ++   C  G+ ++A+++F+ M       +++T+NTLI 
Sbjct: 531 AEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIY 590

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              K     E+++L+ +M ++GI P  +T+  L  GL E  +   A ++++ M  + +  
Sbjct: 591 WLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIIL 650

Query: 124 ETSTYNTFIDGLCKN 138
           +    +  I     N
Sbjct: 651 DRDVSDRLISMFKSN 665



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 10/196 (5%)

Query: 71  VEESLNLYSEML----SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           V+ +  L SE L    S+G+      Y  L  G     + +  +  FDEM  S       
Sbjct: 138 VDSNFFLLSEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGV 197

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLK--CELGIEAYSCLIDGLCKIGKLETAWELFQ 184
            YN FI  L KN    +  E + ++ + K  C L    YS  I  LC+  ++E    L  
Sbjct: 198 DYNRFIGVLVKNC-CFDLVEKYYSVALDKGFC-LTSFTYSRWISALCQSERIELVERLLA 255

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI-RN 243
            + + G  P++   NI +   C   ++  A     +M  +G  P+ VT+ T+ +GC+  N
Sbjct: 256 DMDKFGCFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTV-VGCLCDN 314

Query: 244 NETSKVVELLHRMDER 259
            + ++ VEL   M  R
Sbjct: 315 KQFAEAVELWEEMVRR 330


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 138/247 (55%), Gaps = 5/247 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M Q+G++ N    +T++D  C   ++D A  L  S    G + + VTY TLI G+ + + 
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           VE++L ++ EM    I PTV T+N+L  GL    + E A++ FDE+  S +  + ST+N+
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPR 188
            I G CK G + +A E +     +K     + Y+C  L++GLCK G  E A   F +L  
Sbjct: 562 IILGYCKEGRVEKAFEFYN--ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619

Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
              + + VTYN MI  FC D ++ +A+DL  +ME KG+ P+  T+N+ +   + + + S+
Sbjct: 620 EREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678

Query: 249 VVELLHR 255
             ELL +
Sbjct: 679 TDELLKK 685



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 135/259 (52%), Gaps = 11/259 (4%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++ +L+   G  P+   Y TLI  +   G++  A E+   M   G   N +T NT+++  
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK + ++E+ NL +    +G     VTY TL  G F   +VE AL+++DEM+   +    
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKLETAWE 181
           ST+N+ I GLC +G    A E F  L     E G+      ++ +I G CK G++E A+E
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDEL----AESGLLPDDSTFNSIILGYCKEGRVEKAFE 577

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGC 240
            +    +    P+  T NI+++G C +G  +KA + F  + E + V  + VT+NT++   
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAF 635

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ +  +  +LL  M+E+
Sbjct: 636 CKDKKLKEAYDLLSEMEEK 654



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 1/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR-ARELFVSMDINGCMHNVVTYNTL 61
           EA +L++ M   GV+ N   ++  +   C   + +   R++   +D++G   ++VTY+TL
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I  Y K  D+  +L +  EM  KGI+   +T NT+   L +  +++ A  L +       
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY T I G  +   + +A E++  ++ +K    +  ++ LI GLC  GK E A E
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            F  L   GL+P+  T+N +I G+C +G+++KA + + +       P+  T N L+ G  
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602

Query: 242 RNNETSKVVELLHRMDE 258
           +   T K +   + + E
Sbjct: 603 KEGMTEKALNFFNTLIE 619



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 140/267 (52%), Gaps = 14/267 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM----DINGCMHNVV 56
           +  A  + D M++ GV  N   ++ L++G+CL G+++ A  +   M     +N    + V
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP---DNV 241

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           TYNT++    K   + +   L  +M   G+ P  VTYN L +G  ++  ++ A ++ + M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           + ++V  +  TYN  I+GLC  G + E  EL   ++ LK +  +  Y+ LIDG  ++G  
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD----KAHDLFLDMEAKGVAPNCVT 232
             A +L + +   G+  N VT+NI +   C + + +    K  +L +DM   G +P+ VT
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL-VDMH--GFSPDIVT 418

Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
           ++TL+   ++  + S  +E++  M ++
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQK 445



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           +++A  +L+ M+    V P+   Y+T++      G +   +EL + M  NG + N VTYN
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            L+ GYCK   ++E+  +   M    + P + TYN L +GL     +   L+L D M+  
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TYNT IDG  + G  +EA +L   +     +     ++  +  LCK  K E  
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399

Query: 180 WELFQSLPRV-GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
               + L  + G  P++VTY+ +I  +   G +  A ++  +M  KG+  N +T NT++ 
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459

Query: 239 GCIRNNETSKVVELLHRMDER 259
              +  +  +   LL+   +R
Sbjct: 460 ALCKERKLDEAHNLLNSAHKR 480



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 57/234 (24%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  + D M +  + P    +++LI G C  G+ + A E F  +  +G + +  T+N+
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPT------------------------------- 89
           +I GYCK   VE++   Y+E +    +P                                
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621

Query: 90  ---VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
               VTYNT+     +  +++ A  L  EM+   +  +  TYN+FI  L ++G + E  E
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681

Query: 147 LFRTLR----VLKCELGIE-------------------AYSCLIDGLCKIGKLE 177
           L +        +K +L +E                   AYS +ID LC  G+L+
Sbjct: 682 LLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLK 735



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 6/214 (2%)

Query: 53  HNVVTYNTLINGYCKTKDVEESL--NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
           H      +L+  Y +T D   SL  +L    L     P+   ++          +   AL
Sbjct: 92  HKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVAL 151

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCK---NGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
           ++F +M    +     T NT + GL +   +  I  A E+F  +  +   L ++ ++ L+
Sbjct: 152 QIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLV 211

Query: 168 DGLCKIGKLETAWELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +G C  GKLE A  + + +     + P+ VTYN ++      G++    +L LDM+  G+
Sbjct: 212 NGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGL 271

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            PN VT+N L+ G  +     +  +++  M + N
Sbjct: 272 VPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 135/254 (53%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  M +  + P+ F Y+T+I GFC   E+++A EL   M  +GC  ++VT+  LI
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +CK   ++E++    EM   G+   +V Y +L  G  +  +++    LFDE+     +
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYNT I G CK G + EA+E+F  +        +  Y+ LIDGLC +GK + A +L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +      PN VTYNI+I+  C DG +  A ++   M+ +   P+ +T+N L+ G   
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399

Query: 243 NNETSKVVELLHRM 256
             +  +  +LL+ M
Sbjct: 400 KGDLDEASKLLYLM 413



 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 129/237 (54%), Gaps = 2/237 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM--DINGCMHNVVTYNT 60
           +A  +++LM +R  RP+   Y+ L+ G C  G++D A +L   M  D +    +V++YN 
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CK   + ++L++Y  ++ K      VT N L +   +   V  A++L+ ++  S 
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   + TY   IDG CK G +  A  L   +RV + +  +  Y+CL+  LCK G L+ AW
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            LF+ + R    P+VV++NIMI G    G +  A  L + M   G++P+  T++ L+
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 129/253 (50%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L LM++RG   N + ++ L+ G C   E  +A  L   M  N  M +V +YNT+I G+C
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           + K++E++L L +EM   G   ++VT+  L     +  +++ A+    EM+   + A+  
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
            Y + I G C  G +     LF  +           Y+ LI G CK+G+L+ A E+F+ +
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G+ PNV TY  +I G C  G+  +A  L   M  K   PN VT+N ++    ++   
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368

Query: 247 SKVVELLHRMDER 259
           +  VE++  M +R
Sbjct: 369 ADAVEIVELMKKR 381



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 112/211 (53%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           G   NV  +N L+ G C+  +  ++++L  EM    + P V +YNT+  G  E  ++E A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
           L+L +EM+ S  +    T+   ID  CK G + EA    + ++ +  E  +  Y+ LI G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256

Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            C  G+L+    LF  +   G  P  +TYN +I GFC  GQ+ +A ++F  M  +GV PN
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316

Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             T+  L+ G     +T + ++LL+ M E++
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 104/206 (50%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N V+ + L+  Y + +    +  + + ML +G    V  +N L  GL    +   A+ L 
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
            EM+ + +  +  +YNT I G C+   + +A EL   ++   C   +  +  LID  CK 
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           GK++ A    + +  +GL  ++V Y  +I GFC+ G++D+   LF ++  +G +P  +T+
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
           NTL+ G  +  +  +  E+   M ER
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIER 311



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 37/254 (14%)

Query: 1   MDEASRLLDLMIQRG--VRPNAFVYSTLIDGFCL-------------------------- 32
           +DEAS+LL LM++      P+   Y+ LI G C                           
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462

Query: 33  ---------TGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLS 83
                     G++++A EL+  +  +  + N  TY  +I+G+CKT  +  +  L  +M  
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 84  KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
             ++P+V  YN L   L +   ++ A +LF+EMQ  +   +  ++N  IDG  K G I  
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
           A  L   +        +  YS LI+   K+G L+ A   F  +   G  P+    + ++ 
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642

Query: 204 GFCNDGQMDKAHDL 217
              + G+ DK  +L
Sbjct: 643 YCISQGETDKLTEL 656



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 19/236 (8%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTY---------------NTLIN 63
           N  VYS L++ F  T    R+    +  D N  + N V+                N L+ 
Sbjct: 25  NPRVYSKLVNAFSETETKLRS----LCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMA 80

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
              ++++ E + + Y +ML        V+ + L     ++ +   A  +   M     A 
Sbjct: 81  KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               +N  + GLC+N    +A  L R +R       + +Y+ +I G C+  +LE A EL 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   G   ++VT+ I+I  FC  G+MD+A     +M+  G+  + V + +L+ G
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 67/136 (49%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           ++P+ F Y+ L+   C  G +D+A  LF  M  +    +VV++N +I+G  K  D++ + 
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
           +L   M   G+ P + TY+ L +   ++  ++ A+  FD+M  S    +    ++ +   
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644

Query: 136 CKNGYIVEAAELFRTL 151
              G   +  EL + L
Sbjct: 645 ISQGETDKLTELVKKL 660



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 2/153 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A RL + M +    P+   ++ +IDG    G+I  A  L V M   G   ++ TY+ 
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LIN + K   ++E+++ + +M+  G  P     +++        + +   +L  ++   D
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKD 664

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
           +  +     T +D +C +   ++ A+  R LRV
Sbjct: 665 IVLDKELTCTVMDYMCNSSANMDLAK--RLLRV 695


>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 1 [Glycine max]
 gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 522

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 135/253 (53%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+ M+  G+ PN   ++TLI G+C  G    A ++   M  NG   NVVT+NTLING+C
Sbjct: 247 MLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFC 306

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           K + + E+  +++EM    + P+VVTYNTL +G  ++   E  +++++EM  + + A+  
Sbjct: 307 KERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADIL 366

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TYN  I GLCK+G   +AA   R L           +S LI G C     E A+ +++S+
Sbjct: 367 TYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSM 426

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            R G  PN  T+ ++I  FC +   D A  +  DM  + ++P+  T + L  G  R  + 
Sbjct: 427 VRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKN 486

Query: 247 SKVVELLHRMDER 259
              + L   M+ R
Sbjct: 487 QLALALCSEMEVR 499



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 126/241 (52%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PN +  + +I  +C+ GE+ +  ++   M   G   NVV++NTLI+GYC       +L
Sbjct: 221 VSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLAL 280

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            + S M+  G++P VVT+NTL +G  +  ++  A ++F+EM+ ++V     TYNT ++G 
Sbjct: 281 KVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGY 340

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
            + G       ++  +     +  I  Y+ LI GLCK GK + A    + L +  L+PN 
Sbjct: 341 GQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNA 400

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
            T++ +I G C     ++A  ++  M   G +PN  TF  L+    +N +    V++L  
Sbjct: 401 STFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRD 460

Query: 256 M 256
           M
Sbjct: 461 M 461



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 114/226 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++  LM++ GV+PN   ++TLI+GFC   ++  A  +F  M +     +VVTYNTL+N
Sbjct: 279 ALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLN 338

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY +  D E  + +Y EM+  G++  ++TYN L  GL +  + + A     E+   ++  
Sbjct: 339 GYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVP 398

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             ST++  I G C       A  ++R++    C    + +  LI   CK    + A ++ 
Sbjct: 399 NASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVL 458

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           + +    + P++ T + +  G C  G+   A  L  +ME + + P+
Sbjct: 459 RDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +  V+ +L      T +   A  ++  M  +G    V + N  ++   + +  + +L  Y
Sbjct: 153 SPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFY 212

Query: 79  SEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
            E+  +  + P V T N +      + +V+    + ++M    ++    ++NT I G C 
Sbjct: 213 REIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCN 272

Query: 138 NGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
            G    A ++    + L  E G++     ++ LI+G CK  KL  A  +F  +    + P
Sbjct: 273 KGLFGLALKV----KSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDP 328

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VVTYN +++G+   G  +    ++ +M   G+  + +T+N L+LG  ++ +T K    +
Sbjct: 329 SVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFV 388

Query: 254 HRMDERN 260
             +D+ N
Sbjct: 389 RELDKEN 395



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 4/196 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+R+ + M    V P+   Y+TL++G+   G+ +    ++  M  NG   +++TYN 
Sbjct: 311 LHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNA 370

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK    +++     E+  + + P   T++ L  G    +  E A  ++  M  S 
Sbjct: 371 LILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSG 430

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLET 178
            +    T+   I   CKN     A ++ R +  R++  +L   +  C  DGLC+ GK + 
Sbjct: 431 CSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELC--DGLCRCGKNQL 488

Query: 179 AWELFQSLPRVGLMPN 194
           A  L   +    L+P+
Sbjct: 489 ALALCSEMEVRRLLPD 504



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
           L+S  L     P V  +++LF  L   ++  HA  ++  M+    +    + N F+  L 
Sbjct: 143 LFSYRLCNSSSPLV--FDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLL 200

Query: 137 KNGYIVEAAELFRTLRVLKC-ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           +      A   +R +R   C    +   + +I   C +G+++  +++ + +  +GL PNV
Sbjct: 201 RLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNV 260

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           V++N +I G+CN G    A  +   M   GV PN VTFNTL+ G  +  +  +   + + 
Sbjct: 261 VSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNE 320

Query: 256 MDERN 260
           M   N
Sbjct: 321 MKVAN 325


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 133/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           ASRLL L++  G  PN   + TLI+GFC  GE+DRA +LF  M+  G   +++ Y+TLI+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY K   +     L+S+ L KG++  VV +++      +   +  A  ++  M    ++ 
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   I GLC++G I EA  ++  +     E  I  YS LIDG CK G L + + L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + ++G  P+VV Y +++ G    G M  A    + M  + +  N V FN+L+ G  R 
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 244 NETSKVVELLHRM 256
           N   + +++   M
Sbjct: 510 NRFDEALKVFRLM 522



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  L  +M QRG+ P+   YSTLIDG+   G +    +LF      G   +VV +++
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+ Y K+ D+  +  +Y  ML +GI P VVTY  L  GL +  ++  A  ++ ++    
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ IDG CK G +     L+  +  +     +  Y  L+DGL K G +  A 
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +    +  NVV +N +I G+C   + D+A  +F  M   G+ P+  TF T+M   
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541

Query: 241 IRNNETSKVVELLHRM 256
           I      + + L  RM
Sbjct: 542 IMEGRLEEALFLFFRM 557



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 126/260 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A R    M+ + +R N  V+++LIDG+C     D A ++F  M I G   +V T+ T
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++        +EE+L L+  M   G+ P  + Y TL     +  +    L+LFD MQ + 
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++A+ +  N  I  L K   I +A++ F  L   K E  I  Y+ +I G C + +L+ A 
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+ L      PN VT  I+IH  C +  MD A  +F  M  KG  PN VT+  LM   
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716

Query: 241 IRNNETSKVVELLHRMDERN 260
            ++ +     +L   M E+ 
Sbjct: 717 SKSVDIEGSFKLFEEMQEKG 736



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 105/194 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++AS+  + +I+  + P+   Y+T+I G+C    +D A  +F  + +     N VT   
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  D++ ++ ++S M  KG +P  VTY  L     +   +E + KLF+EMQ   
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    +Y+  IDGLCK G + EA  +F      K    + AY+ LI G CK+G+L  A 
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796

Query: 181 ELFQSLPRVGLMPN 194
            L++ + R G+ P+
Sbjct: 797 LLYEHMLRNGVKPD 810



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 121/250 (48%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+ G  P+  +Y  L+DG    G +  A    V M       NVV +N+LI+G+C+   
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +E+L ++  M   GI+P V T+ T+        ++E AL LF  M    +  +   Y T
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK+       +LF  ++  K    I   + +I  L K  ++E A + F +L    
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + P++VTYN MI G+C+  ++D+A  +F  ++     PN VT   L+    +NN+    +
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691

Query: 251 ELLHRMDERN 260
            +   M E+ 
Sbjct: 692 RMFSIMAEKG 701



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 121/254 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA ++  LM   G++P+   ++T++    + G ++ A  LF  M   G   + + Y TL
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK       L L+  M    I   +   N + H LF+ H++E A K F+ +    +
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYNT I G C    + EA  +F  L+V          + LI  LCK   ++ A  
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  +   G  PN VTY  ++  F     ++ +  LF +M+ KG++P+ V+++ ++ G  
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752

Query: 242 RNNETSKVVELLHR 255
           +     +   + H+
Sbjct: 753 KRGRVDEATNIFHQ 766



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 121/239 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  L   M + G+ P+A  Y TLID FC   +     +LF  M  N    ++   N 
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+   K   +E++   ++ ++   + P +VTYNT+  G   + +++ A ++F+ ++ + 
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T T    I  LCKN  +  A  +F  +     +     Y CL+D   K   +E ++
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +LF+ +   G+ P++V+Y+I+I G C  G++D+A ++F       + P+ V +  L+ G
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 37/210 (17%)

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +CK  +V ++L+ +  ++ +G R  +V+ N +  GL  + Q+E A +L   +     A  
Sbjct: 228 FCKG-EVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPN 285

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF- 183
             T+ T I+G CK G +  A +LF+ +     E  + AYS LIDG  K G L    +LF 
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345

Query: 184 QSLPR----------------------------------VGLMPNVVTYNIMIHGFCNDG 209
           Q+L +                                   G+ PNVVTY I+I G C DG
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ +A  ++  +  +G+ P+ VT+++L+ G
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
           G+ A+  ++D L   G++  A +  + +   G    +V+ N ++ G   D Q++ A  L 
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLL 274

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +   G APN VTF TL+ G  +  E  +  +L   M++R 
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 130/257 (50%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++A RL   M  +G  PN + Y+ LI G C++G +  A  LF  M  +G   N VTYN L
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           IN   + + ++ +  + + M   G+   +VTYN +  G   +   + A+ + + M     
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           +A   TYNT I G C +G    A  +   +R   C+    +Y+ LI G CKI K+E+A+ 
Sbjct: 627 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 686

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LF  +   GL PN VTY  +I G+C D ++D A  L   M+  G  PN  T+N L+ G  
Sbjct: 687 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 746

Query: 242 RNNETSKVVELLHRMDE 258
           + N  S   EL   M E
Sbjct: 747 KQNNFSGAEELCKVMIE 763



 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 121/237 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A R+LDLM   G +P+ + Y+ LI GFC   +++ A  LF  M  +G   N VTY  LI
Sbjct: 648 SALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 707

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +GYCK + ++ + +L   M   G RP V TYN L HGL + +    A +L   M    + 
Sbjct: 708 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF 767

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   IDGLCKNG    A E+F  +    C   +  YS LI  L + GK+E A  L
Sbjct: 768 PNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENL 827

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           F  L R GL+P+ +TY  MI  +   G+++ A +    M   G  P   T+  L+ G
Sbjct: 828 FAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 884



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 129/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +++ M+QRG   N   Y+T+I G+C +G    A  +   M   GC  +  +Y  LI
Sbjct: 613 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+CK   +E +  L++EM+  G+ P  VTY  L  G  +  +++ A  L + M+ S   
Sbjct: 673 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TYN  I GL K      A EL + +        +  Y+ +IDGLCK G    A E+
Sbjct: 733 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F  +   G +PN++TY+ +I     +G++++A +LF ++E  G+ P+ +T+  ++   I 
Sbjct: 793 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 852

Query: 243 NNETSKVVELLHRM 256
           + +       L RM
Sbjct: 853 SGKVEHAFNFLGRM 866



 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 120/231 (51%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +L+LM + G+  N   Y+ +I G+C+ G+  +A  +  +M   G   N+VTYNT+I GYC
Sbjct: 582 VLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 641

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
            + +   +L +   M   G +P   +Y  L  G  +I ++E A  LF+EM    +     
Sbjct: 642 DSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEV 701

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   IDG CK+  +  A  L   ++   C   ++ Y+ LI GL K      A EL + +
Sbjct: 702 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 761

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              G+ PNVVTY  MI G C +G    A ++F  M  +G  PN +T+++L+
Sbjct: 762 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 812



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 131/256 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  ++  + +  + P+ F Y+++I G C   ++D A ++F  M   GC  N VTY+TLI
Sbjct: 403 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 462

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG C +  V E+ +L  EM+  GI PT  T       L ++   E A +LF +M++    
Sbjct: 463 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 522

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY   I GLC +G +  A  LF  +           Y+ LI+ L +  +++ A+ +
Sbjct: 523 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 582

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + R GL  N+VTYN MI G+C  G   KA  +  +M  +G + N VT+NT++ G   
Sbjct: 583 LNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 642

Query: 243 NNETSKVVELLHRMDE 258
           +  T+  + +L  M +
Sbjct: 643 SGNTTSALRILDLMRD 658



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 4/239 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M      LD++ Q G+R   F YS L+      G      + +  M   G   N++ YN 
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 390

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +IN  CK  +V ++  +  ++    + P   TY ++  G    H ++ AL++F++M    
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL--IDGLCKIGKLET 178
               T TY+T I+GLC +G + EA +L R + +L   L   A++C   I  LC +G  E 
Sbjct: 451 CEPNTVTYSTLINGLCDSGRVNEAFDLIREM-ILHGILPT-AHTCTGPIIALCDMGCYED 508

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           AW LF  +   G  PNV TY  +I G C  G +  A  LF  M   GV PN VT+N L+
Sbjct: 509 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 567



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 125/249 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  GV+PN  +Y+ +I+  C  G +  A  +   +  +    +  TY ++I G+C+  D
Sbjct: 376 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 435

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           ++ +L ++++M  +G  P  VTY+TL +GL +  +V  A  L  EM    +     T   
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I  LC  G   +A  LF  ++   CE  +  Y+ LI GLC  G L+ A  LF  + R G
Sbjct: 496 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           + PN VTYN +I+    + ++  A  +   M   G+  N VT+N ++ G     +  K +
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615

Query: 251 ELLHRMDER 259
            +++ M +R
Sbjct: 616 LVMNNMLQR 624



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 100/208 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+ A  L + M+  G+ PN   Y+ LIDG+C   ++D A  L   M  +GC  NV TYN 
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K  +   +  L   M+ +GI P VVTY  +  GL +      AL++F++M    
Sbjct: 741 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 800

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY++ I  L + G + EA  LF  L           Y  +I+     GK+E A+
Sbjct: 801 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 860

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCND 208
                + + G  P + TY ++I G  N+
Sbjct: 861 NFLGRMIKAGCQPTLWTYGVLIKGLKNE 888



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 102/210 (48%)

Query: 49  NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEH 108
           +G    +  Y+ L+    +       ++ Y  MLS+G++P ++ YN + + L +   V  
Sbjct: 344 SGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVAD 403

Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
           A  +  ++  S+++ +T TY + I G C+   +  A ++F  +    CE     YS LI+
Sbjct: 404 AETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLIN 463

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
           GLC  G++  A++L + +   G++P   T    I   C+ G  + A  LF+DM+ KG  P
Sbjct: 464 GLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEP 523

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           N  T+  L+ G   +      + L HRM  
Sbjct: 524 NVYTYTALISGLCVSGLLKVAIGLFHRMSR 553



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 59/285 (20%)

Query: 4    ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
            A  + + MI++G  PN   YS+LI      G+++ A  LF  ++ +G + + +TY  +I 
Sbjct: 789  ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 848

Query: 64   GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------------------------ 99
             Y  +  VE + N    M+  G +PT+ TY  L  G                        
Sbjct: 849  AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSF 908

Query: 100  ----------------LFEIH-----QVEHAL--------------KLFDEMQHSDVAAE 124
                            L E+      QV++AL              +L   M    +  +
Sbjct: 909  GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 968

Query: 125  TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
               YN+ +  L +   +  A  +F+ +    CE+ +  Y  LI  LC++ + + A   F+
Sbjct: 969  QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 1028

Query: 185  SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            ++      P+ V   ++I G   DG  D   +    ME +   P+
Sbjct: 1029 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 1073



 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 80/227 (35%), Gaps = 28/227 (12%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--INGCMH----- 53
            ++ A   L  MI+ G +P  + Y  LI G  L  E   A +   ++   +  C       
Sbjct: 856  VEHAFNFLGRMIKAGCQPTLWTYGVLIKG--LKNEYLLADQRLAALPDVVPNCSFGYQTT 913

Query: 54   -------------------NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
                               +V   N L++         E+  L   M+S+G+ P    YN
Sbjct: 914  DQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 973

Query: 95   TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            +L   L  +  V+ A+ +F  M         + Y   I  LC+     EA   F  + + 
Sbjct: 974  SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 1033

Query: 155  KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
                     + LIDGL + G  +   E    +     MP+   Y I+
Sbjct: 1034 TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 139/255 (54%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA    D+M ++G+ PN   Y+TLI G    G I+ A +L  +M+  G      TYN  
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ + K+ +  +++  + +M +KGI P +V  N   + L E+ ++  A  +F+ ++ + +
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           A ++ TYN  +    K G + EA  L   +    CE  +   + LID L K G+++ AW+
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +F  +  + L P VVTYN ++ G   +G++ KA +LF  M  K  +PN ++FNTL+    
Sbjct: 564 MFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFC 623

Query: 242 RNNETSKVVELLHRM 256
           +N+E    +++  +M
Sbjct: 624 KNDEVELALKMFSKM 638



 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 133/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M   G +P+  +Y TL+D F   G++D  +E +  M+ +G M +VVT+  
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++  CK +D +E+   +  M  +GI P + TYNTL  GL    ++E ALKL   M+   
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V     TYN FID   K+G   +A E F  ++       I A +  +  L ++G+L  A 
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F  L   GL P+ VTYN+M+  +   GQ+D+A +L  +M   G  P+ +  N+L+   
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 241 IRNNETSKVVELLHRMDE 258
            +     +  ++  RM +
Sbjct: 553 YKAGRVDEAWQMFDRMKD 570



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 135/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A +LL  M   GV+P A+ Y+  ID F  +GE  +A E F  M   G + N+V  N 
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            +    +   + E+  +++ +   G+ P  VTYN +     ++ QV+ A+ L  EM  + 
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +    N+ ID L K G + EA ++F  ++ +K    +  Y+ L+ GL K G+++ A 
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF+S+      PN +++N ++  FC + +++ A  +F  M      P+ +T+NT++ G 
Sbjct: 598 ELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657

Query: 241 IRNNETSKVVELLHRMDE 258
           I+ N+ +      H++ +
Sbjct: 658 IKENKVNHAFWFFHQLKK 675



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 132/257 (51%), Gaps = 1/257 (0%)

Query: 4    ASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A ++ D   ++ G+ P    Y+ LI         ++A +LF  M   GC  +  T+N L+
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 63   NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              + K+  + E   LY EM+S+  +P  +TYN +   L + + ++ AL  F ++  SD  
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 123  AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
                TY   IDGL K G + EA  LF  +    C+     ++ LI+G  KIG  ETA +L
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950

Query: 183  FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            F+ +   G+ P++ +Y I++   C  G++D+A   F ++++ G+ P+ + +N ++ G  +
Sbjct: 951  FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 243  NNETSKVVELLHRMDER 259
            +    + + L + M  R
Sbjct: 1011 SQRMEEALALYNEMRNR 1027



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 112/229 (48%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           LL  M   G+RPN + ++  I      G+ID A E+F  MD  GC  ++VTY  LI+  C
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC 308

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
               +E +  L+ +M + G +P  V Y TL     +   ++   + + +M+      +  
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVV 368

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T+   +D LCK     EA   F  +R       +  Y+ LI GL + G++E A +L  ++
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM 428

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
             VG+ P   TYNI I  F   G+  KA + F  M+AKG+ PN V  N 
Sbjct: 429 ESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 116/236 (49%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +D+A      ++    RP    Y  LIDG    G ++ A  LF  M   GC  N   +N 
Sbjct: 874  LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933

Query: 61   LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            LINGY K  D E +  L+  M+++GIRP + +Y  L   L    +V+ AL  F+E++ + 
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 121  VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  +   YN  I+GL K+  + EA  L+  +R       +  Y+ L+  L   G +E A 
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 181  ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             +++ L   GL P+V TYN +I G+      + A+ ++ +M   G  PN  T+  L
Sbjct: 1054 RMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 146/296 (49%), Gaps = 38/296 (12%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA ++ D M    + P    Y+TL+ G    G + +A ELF SM    C  N +++NT
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++ +CK  +VE +L ++S+M     +P V+TYNT+ +GL + ++V HA   F +++ S 
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS- 676

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------FRTLR----------VLKCELG-- 159
           +  +  T  T + GL K G I +A  +         FR  R          +++ E+   
Sbjct: 677 MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKA 736

Query: 160 -IEAYSCLIDG--------------LCKIGKLETAWELFQSL-PRVGLMPNVVTYNIMIH 203
            I A   +++G              LCK  +   A+++F     ++G+ P + +YN +I 
Sbjct: 737 IIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIG 796

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
                   +KA DLF DM+  G AP+  TFN L+    ++ + +++ EL   M  R
Sbjct: 797 ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR 852



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 116/229 (50%)

Query: 11   MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
            MI R  +P+A  Y+ +I     +  +D+A + F  +  +       TY  LI+G  K   
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 71   VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +EE++ L+ EM   G +P    +N L +G  +I   E A +LF  M +  +  +  +Y  
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 131  FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
             +D LC  G + EA   F  L+    +    AY+ +I+GL K  ++E A  L+  +   G
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 191  LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            ++P++ TYN ++      G +++A  ++ +++  G+ P+  T+N L+ G
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 116/220 (52%), Gaps = 1/220 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  + + + + G+ P++  Y+ ++  +   G++D A  L   M  NGC  +V+  N+
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K   V+E+  ++  M    + PTVVTYNTL  GL +  +V+ A++LF+ M    
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +  T ++NT +D  CKN  +  A ++F  + V+ C+  +  Y+ +I GL K  K+  A+
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             F  L +  + P+ VT   ++ G    GQ+  A  +  D
Sbjct: 668 WFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARD 706



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 117/237 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++ + + + M ++ +R +   Y T+     + G + +   +   M   G + N  +YN 
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   ++    E+L +Y  M+S+G++P++ TY+ L   L +    E  + L  EM+   
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   I  L + G I EA E+FR +    C   +  Y+ LID LC  G+LE A 
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           ELF  +   G  P+ V Y  ++  F + G +D   + +  MEA G  P+ VTF  L+
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILV 374



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 4/216 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL  MI+ G  P+  V ++LID     G +D A ++F  M        VVTYNT
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G  K   V++++ L+  M+ K   P  +++NTL     +  +VE ALK+F +M   D
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC-LIDGLCKIGKLETA 179
              +  TYNT I GL K   +  A   F  L+  K         C L+ GL K G++  A
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK--KSMHPDHVTICTLLPGLVKCGQIGDA 700

Query: 180 WELFQS-LPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
             + +  + +V    N   +  ++ G   + +MDKA
Sbjct: 701 ISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKA 736



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 1/220 (0%)

Query: 38  RARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           RA   F S+ +    +H   T N ++        VE+   ++  M  K IR  + TY T+
Sbjct: 104 RALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTI 163

Query: 97  FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
           F  L     +     + ++M+ +       +YN  I  L ++G+  EA E++R +     
Sbjct: 164 FKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223

Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
           +  ++ YS L+  L K    E    L + +  +GL PNV T+ I I      G++D+A++
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283

Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
           +F  M+ +G  P+ VT+  L+       +     EL  +M
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 4/175 (2%)

Query: 88  PTVV----TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVE 143
           PTV+    T N +   L    +VE    +F+ MQ   +  +  TY T    L   G + +
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQ 175

Query: 144 AAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIH 203
              +   +R     L   +Y+ LI  L + G    A E+++ +   GL P++ TY+ ++ 
Sbjct: 176 MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMV 235

Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
                   +    L  +ME  G+ PN  TF   +    R  +  +  E+  RMD+
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 37/63 (58%)

Query: 1    MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +++A R+ + +   G+ P+ F Y+ LI G+ L+   + A  ++ +M ++GC  N+ TY  
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQ 1108

Query: 61   LIN 63
            L N
Sbjct: 1109 LPN 1111


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 141/265 (53%), Gaps = 11/265 (4%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A RL   M  RG +P+++ Y TLI+G C  G+I +A+EL   M+  G   +VV+Y +
Sbjct: 172 VESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTS 231

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G C++ +++E++ L  EM+  GI P V TY++L  GL +      A++L + M    
Sbjct: 232 LIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRR 291

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV--LKCELGIEAYSCLIDGLCKIGKLET 178
           +     TY+T I+GLCK G   EA E+   +R+  LK + G+  Y  +I GLC     + 
Sbjct: 292 LLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGM--YGRIISGLCAACNYQE 349

Query: 179 AWELFQSLPRVGLMPNVVTY-------NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           A      +   G+ PN  ++       N+++ G CN+    +A  L+L M  +G++    
Sbjct: 350 AANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIG 409

Query: 232 TFNTLMLGCIRNNETSKVVELLHRM 256
           TF+ L+    +  + +K   +L  M
Sbjct: 410 TFDCLVKCFCKRGDLNKAARILEEM 434



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 130/257 (50%), Gaps = 8/257 (3%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGE-IDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           M ++G+ P     + LI   C   E ++ A  LF  M   GC  +  TY TLING CK  
Sbjct: 146 MREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLG 205

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
            + ++  L  EM  KG+ P+VV+Y +L HGL + + ++ A++L +EM  + +     TY+
Sbjct: 206 KISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYS 265

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           + +DGLCK+G+  +A EL   +   +    +  YS LI+GLCK GK   A E+   +   
Sbjct: 266 SLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQ 325

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF-------NTLMLGCIR 242
           GL P+   Y  +I G C      +A +   +M   G++PN  ++       N ++ G   
Sbjct: 326 GLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCN 385

Query: 243 NNETSKVVELLHRMDER 259
           N + ++  +L   M  R
Sbjct: 386 NVDPTRAFQLYLSMRTR 402



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 1/246 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G R +   +  +I       +   A  +   M    C      + T+  GY +     ++
Sbjct: 45  GFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDA 104

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           + ++ +M    ++PT  +Y T+F  L E + V+ A+  + EM+   +     + N  I  
Sbjct: 105 IRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKA 164

Query: 135 LCKNGYIVEAA-ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           LCKN   VE+A  LFR +    C+     Y  LI+GLCK+GK+  A EL   +   GL P
Sbjct: 165 LCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSP 224

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
           +VV+Y  +IHG C    +D+A +L  +M   G+ PN  T+++LM G  ++  +S+ +ELL
Sbjct: 225 SVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELL 284

Query: 254 HRMDER 259
             M  R
Sbjct: 285 EVMVRR 290



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 7/226 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  LL+ MI  G+ PN F YS+L+DG C +G   +A EL   M     + N+VTY+T
Sbjct: 242 LDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYST 301

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK     E++ +   M  +G++P    Y  +  GL      + A    DEM    
Sbjct: 302 LINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGG 361

Query: 121 VAAETSTY-------NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           ++   +++       N  + GLC N     A +L+ ++R     + I  + CL+   CK 
Sbjct: 362 ISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKR 421

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
           G L  A  + + +   G +P+   +N+++ G  +  ++ +  +L +
Sbjct: 422 GDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLV 467



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 5/206 (2%)

Query: 59  NTLINGYCKT-KDVEESLNLY---SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           N+L+    K  KD+ ++L ++   +E  S G R    T+  + H L  ++Q   A  + +
Sbjct: 15  NSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLE 74

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            M+  D       + T   G  +    ++A  +F  +   + +   ++Y  + D L +  
Sbjct: 75  RMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEEN 134

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCVTF 233
            ++ A   ++ +   G+ P VV+ NI+I   C N+  ++ A  LF +M  +G  P+  T+
Sbjct: 135 HVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTY 194

Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
            TL+ G  +  + S+  ELL  M+E+
Sbjct: 195 GTLINGLCKLGKISQAKELLDEMEEK 220



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYS-------TLIDGFCLTGEIDRARELFVSMDINGCMHN 54
            EA+  +D M   G+ PN   ++        ++ G C   +  RA +L++SM   G    
Sbjct: 348 QEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVE 407

Query: 55  VVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF- 113
           + T++ L+  +CK  D+ ++  +  EM+  G  P    +N L  GL++  +V    +L  
Sbjct: 408 IGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLV 467

Query: 114 DEMQHSDVAAET 125
            E++   V AE+
Sbjct: 468 AELKQKFVEAES 479


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 133/254 (52%), Gaps = 1/254 (0%)

Query: 7   LLDLMIQRGVRPNAFVYS-TLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           LL+++++ G    A  ++  ++ G C  G+++  R+L       GC+ N++ YNTLI+GY
Sbjct: 171 LLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGY 230

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           CK  D+E +  L+ E+  KG  PTV TY  + +G  +    +   +L  EM    +    
Sbjct: 231 CKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNV 290

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
             YNT ID   K+G+IV+A E    +    C+  I  Y+ LI G C+ GK+  A +L + 
Sbjct: 291 QVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQ 350

Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
               GLMPN  +Y  +IH +C  G  D+A +  ++M  +G  P+ VT+  L+ G +   E
Sbjct: 351 ALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGE 410

Query: 246 TSKVVELLHRMDER 259
               + +  +M ER
Sbjct: 411 VDVALTIREKMLER 424



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 125/254 (49%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A   ++ MI+ G +P+   Y+TLI G C  G++  A +L       G M N  +Y  LI
Sbjct: 308 KAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLI 367

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + YCK    + + N   EM  +G +P +VTY  L HGL    +V+ AL + ++M    V 
Sbjct: 368 HAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF 427

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +   YN  + GLCK   +  A  L   +           Y+ L+DG  + G L+ A +L
Sbjct: 428 PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 487

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           F+     G+ P +V YN MI G+C  G M  A      M+ + +AP+  T++T++ G ++
Sbjct: 488 FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVK 547

Query: 243 NNETSKVVELLHRM 256
            ++     ++   M
Sbjct: 548 QHDLDGAQKMFREM 561



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++E  +L++    +G  PN   Y+TLIDG+C  G+++ A  LF+ + + G +  V TY  
Sbjct: 201 LEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGA 260

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING+CK  D +    L  EM S+G+   V  YNT+    ++   +  A++  + M    
Sbjct: 261 IINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECG 320

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  TYNT I G C++G + EA +L              +Y+ LI   CK G  + A 
Sbjct: 321 CKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRAS 380

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +   G  P++VTY  ++HG    G++D A  +   M  +GV P+   +N LM G 
Sbjct: 381 NWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 440

Query: 241 IRNNETSKVVELLHRM 256
            +  +      LL  M
Sbjct: 441 CKKFKLPAAKLLLAEM 456



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 111/229 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +LL+  + +G+ PN F Y+ LI  +C  G  DRA    + M   G   ++VTY  
Sbjct: 341 VSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGA 400

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G     +V+ +L +  +ML +G+ P    YN L  GL +  ++  A  L  EM    
Sbjct: 401 LVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS 460

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   Y T +DG  +NG + EA +LF          GI  Y+ +I G CK G ++ A 
Sbjct: 461 VLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAM 520

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
                + +  L P+  TY+ +I G+     +D A  +F +M      PN
Sbjct: 521 ACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 569



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 8/259 (3%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           RLL  M  RG+  N  VY+T+ID     G I +A E    M   GC  ++VTYNTLI+G 
Sbjct: 276 RLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGS 335

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
           C+   V E+  L  + L KG+ P   +Y  L H   +    + A     EM       + 
Sbjct: 336 CRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDL 395

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKLETAWE 181
            TY   + GL   G +    ++  T+R    E G+      Y+ L+ GLCK  KL  A  
Sbjct: 396 VTYGALVHGLVVAGEV----DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKL 451

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L   +    ++P+   Y  ++ GF  +G +D+A  LF     KG+ P  V +N ++ G  
Sbjct: 452 LLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYC 511

Query: 242 RNNETSKVVELLHRMDERN 260
           +       +  ++RM +R+
Sbjct: 512 KFGMMKDAMACINRMKKRH 530



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 9/151 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA +L +L I++G+ P    Y+ +I G+C  G +  A      M       +  TY+T
Sbjct: 481 LDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYST 540

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+GY K  D++ +  ++ EM+    +P V+       GL  +  +  +L  F  M+ S+
Sbjct: 541 VIDGYVKQHDLDGAQKMFREMVKMKCKPNVM------DGLQGLLLIIPSLFAFANMECSE 594

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           +      Y++ +D     G   EA+ + +T+
Sbjct: 595 L--HCINYSSILDQYLPQG-TSEASVILQTM 622



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 27/199 (13%)

Query: 68  TKDVEESL---NLYSEMLSKGIRPTVVTYNTLFHGLFE-IHQVEHALKLFDEMQHSDVAA 123
            KD+ E L   N + E L      + V  + + H + + I  VE  LK FD +     + 
Sbjct: 31  VKDILEVLHTHNQWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVSRGQYSG 90

Query: 124 ETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +   Y++ +  L ++    E   +   +RV +     EA S +I      G +E A E
Sbjct: 91  PINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALE 150

Query: 182 LFQ-SLPRVGLMPNVVTYN--------------------IMIHGFCNDGQMDKAHDLFLD 220
           L+   L      P+V+  N                    IM+ G C +G++++   L  D
Sbjct: 151 LYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIED 210

Query: 221 MEAKGVAPNCVTFNTLMLG 239
              +G  PN + +NTL+ G
Sbjct: 211 RWGQGCIPNIIFYNTLIDG 229


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 135/256 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ ASRLL L++  G  PN   + TLI+GFC  GE+DRA +LF  M+  G   +++ Y+T
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+GY K   +     L+S+ L KG++  VV +++      +   +  A  ++  M    
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    TY   I GLC++G I EA  ++  +     E  I  YS LIDG CK G L + +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L++ + ++G  P+VV Y +++ G    G M  A    + M  + +  N V FN+L+ G 
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506

Query: 241 IRNNETSKVVELLHRM 256
            R N   + +++   M
Sbjct: 507 CRLNRFDEALKVFRLM 522



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 124/256 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  L  +M QRG+ P+   YSTLIDG+   G +    +LF      G   +VV +++
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+ Y K+ D+  +  +Y  ML +GI P VVTY  L  GL +  ++  A  ++ ++    
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ IDG CK G +     L+  +  +     +  Y  L+DGL K G +  A 
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +    +  NVV +N +I G+C   + D+A  +F  M   G+ P+  TF T+M   
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541

Query: 241 IRNNETSKVVELLHRM 256
           I      + + L  RM
Sbjct: 542 IMEGRLEEALFLFFRM 557



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 3/248 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS +   M+ +G+ PN   Y+ LI G C  G I  A  ++  +   G   ++VTY++LI+
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK  ++     LY +M+  G  P VV Y  L  GL +   + HA++   +M    +  
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               +N+ IDG C+     EA ++FR + +   +  +  ++ ++      G+LE A  LF
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT---LMLGC 240
             + ++GL P+ + Y  +I  FC   +      LF  M+   ++ +    N    L+  C
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614

Query: 241 IRNNETSK 248
            R  + SK
Sbjct: 615 HRIEDASK 622



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 112/227 (49%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+ G  P+  +Y  L+DG    G +  A    V M       NVV +N+LI+G+C+   
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            +E+L ++  M   GI+P V T+ T+        ++E AL LF  M    +  +   Y T
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            ID  CK+       +LF  ++  K    I   + +I  L K  ++E A + F +L    
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + P++VTYN MI G+C+  ++D+A  +F  ++     PN VT   L+
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 3/254 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  +   +++RG+ P+   YS+LIDGFC  G +     L+  M   G   +VV Y  L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   +  ++    +ML + IR  VV +N+L  G   +++ + ALK+F  M    + 
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + +T+ T +      G + EA  LF  +  +  E    AY  LID  CK  K     +L
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI- 241
           F  + R  +  ++   N++IH      +++ A   F ++    + P+ VT+NT++ G   
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648

Query: 242 --RNNETSKVVELL 253
             R +E  ++ ELL
Sbjct: 649 LRRLDEAERIFELL 662



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 102/207 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A R    M+ + +R N  V+++LIDG+C     D A ++F  M I G   +V T+ T
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++        +EE+L L+  M   G+ P  + Y TL     +  +    L+LFD MQ + 
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++A+ +  N  I  L K   I +A++ F  L   K E  I  Y+ +I G C + +L+ A 
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCN 207
            +F+ L      PN VT  I+IH  C 
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCK 683



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 37/210 (17%)

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +CK  +V ++L+ +  ++ +G R  +V+ N +  GL  + Q+E A +L   +     A  
Sbjct: 228 FCKG-EVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPN 285

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF- 183
             T+ T I+G CK G +  A +LF+ +     E  + AYS LIDG  K G L    +LF 
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345

Query: 184 QSLPR----------------------------------VGLMPNVVTYNIMIHGFCNDG 209
           Q+L +                                   G+ PNVVTY I+I G C DG
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ +A  ++  +  +G+ P+ VT+++L+ G
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 81/172 (47%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA ++  LM   G++P+   ++T++    + G ++ A  LF  M   G   + + Y TL
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +CK       L L+  M    I   +   N + H LF+ H++E A K F+ +    +
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
             +  TYNT I G C    + EA  +F  L+V          + LI  LCKI
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKI 684



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
           G+ A+  ++D L   G++  A +  + +   G    +V+ N ++ G   D Q++ A  L 
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLL 274

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +   G APN VTF TL+ G  +  E  +  +L   M++R 
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 133/253 (52%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           ASRLL L++  G  PN   + TLI+GFC  GE+DRA +LF  M+  G   +++ Y+TLI+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GY K   +     L+S+ L KG++  VV +++      +   +  A  ++  M    ++ 
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY   I GLC++G I EA  ++  +     E  I  YS LIDG CK G L + + L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + ++G  P+VV Y +++ G    G M  A    + M  + +  N V FN+L+ G  R 
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 244 NETSKVVELLHRM 256
           N   + +++   M
Sbjct: 510 NRFDEALKVFRLM 522



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 118/237 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD A  L  +M QRG+ P+   YSTLIDG+   G +    +LF      G   +VV +++
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+ Y K+ D+  +  +Y  ML +GI P VVTY  L  GL +  ++  A  ++ ++    
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY++ IDG CK G +     L+  +  +     +  Y  L+DGL K G +  A 
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                +    +  NVV +N +I G+C   + D+A  +F  M   G+ P+  TF T+M
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 6/256 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+ G  P+  +Y  L+DG    G +  A    V M       NVV +N+LI+G+C+   
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFH-GLFEIHQVEH-----ALKLFDEMQHSDVAAE 124
            +E+L ++  M   GI+P V T+ T+    + E    +H      L+LFD MQ + ++A+
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
            +  N  I  L K   I +A++ F  L   K E  I  Y+ +I G C + +L+ A  +F+
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            L      PN VT  I+IH  C +  MD A  +F  M  KG  PN VT+  LM    ++ 
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 691

Query: 245 ETSKVVELLHRMDERN 260
           +     +L   M E+ 
Sbjct: 692 DIEGSFKLFEEMQEKG 707



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 105/194 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++AS+  + +I+  + P+   Y+T+I G+C    +D A  +F  + +     N VT   
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK  D++ ++ ++S M  KG +P  VTY  L     +   +E + KLF+EMQ   
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    +Y+  IDGLCK G + EA  +F      K    + AY+ LI G CK+G+L  A 
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767

Query: 181 ELFQSLPRVGLMPN 194
            L++ + R G+ P+
Sbjct: 768 LLYEHMLRNGVKPD 781



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 6/261 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A R    M+ + +R N  V+++LIDG+C     D A ++F  M I G   +V T+ T
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536

Query: 61  LI------NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD 114
           ++      + +CK       L L+  M    I   +   N + H LF+ H++E A K F+
Sbjct: 537 VMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 596

Query: 115 EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIG 174
            +    +  +  TYNT I G C    + EA  +F  L+V          + LI  LCK  
Sbjct: 597 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 656

Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
            ++ A  +F  +   G  PN VTY  ++  F     ++ +  LF +M+ KG++P+ V+++
Sbjct: 657 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716

Query: 235 TLMLGCIRNNETSKVVELLHR 255
            ++ G  +     +   + H+
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQ 737



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLI------DGFCLTGEIDRARELFVSMDINGCMHNV 55
           DEA ++  LM   G++P+   ++T++      D FC   +     +LF  M  N    ++
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572

Query: 56  VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
              N +I+   K   +E++   ++ ++   + P +VTYNT+  G   + +++ A ++F+ 
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           ++ +     T T    I  LCKN  +  A  +F  +     +     Y CL+D   K   
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
           +E +++LF+ +   G+ P++V+Y+I+I G C  G++D+A ++F       + P+ V +  
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 752

Query: 236 LMLG 239
           L+ G
Sbjct: 753 LIRG 756



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 2/225 (0%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTLING 64
           +L DLM +  +  +  V + +I        I+ A + F ++ I G M  ++VTYNT+I G
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL-IEGKMEPDIVTYNTMICG 616

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           YC  + ++E+  ++  +      P  VT   L H L + + ++ A+++F  M        
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             TY   +D   K+  I  + +LF  ++       I +YS +IDGLCK G+++ A  +F 
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 736

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
                 L+P+VV Y I+I G+C  G++ +A  L+  M   GV P+
Sbjct: 737 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 37/210 (17%)

Query: 65  YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
           +CK  +V ++L+ +  ++ +G R  +V+ N +  GL  + Q+E A +L   +     A  
Sbjct: 228 FCKG-EVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPN 285

Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF- 183
             T+ T I+G CK G +  A +LF+ +     E  + AYS LIDG  K G L    +LF 
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345

Query: 184 QSLPR----------------------------------VGLMPNVVTYNIMIHGFCNDG 209
           Q+L +                                   G+ PNVVTY I+I G C DG
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405

Query: 210 QMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++ +A  ++  +  +G+ P+ VT+++L+ G
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
           G+ A+  ++D L   G++  A +  + +   G    +V+ N ++ G   D Q++ A  L 
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLL 274

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
             +   G APN VTF TL+ G  +  E  +  +L   M++R 
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 125/258 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L++ +   G  P    Y+ L++G C  G ++ A +L   +  NGC  +VVTY +
Sbjct: 275 IQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 334

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  K K   E+  L+ EM S+G+    V Y  L  GL +  ++  A  ++  M    
Sbjct: 335 LIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHG 394

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  T +T IDGL K G I  A  +F+++           YS LI GLCK  K++ A 
Sbjct: 395 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 454

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E+   + +    P+ +TYNI+I G C  G ++ A   F +M   G  P+  T+N L+ G 
Sbjct: 455 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGL 514

Query: 241 IRNNETSKVVELLHRMDE 258
            +   T     +L  M  
Sbjct: 515 CKAGNTDAACGVLDDMSS 532



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 128/258 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  L       G   +   Y+ +++      +I  A  L   +  NGC   + TYN 
Sbjct: 240 MIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNA 299

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG CK   +EE+++L  +++  G  P VVTY +L  GL +  +   A KLF EM    
Sbjct: 300 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRG 359

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A +T  Y   I GL + G I +A+ +++T+    C   +   S +IDGL K G++  A 
Sbjct: 360 LALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 419

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +F+S+   GL PN V Y+ +IHG C   +MD A ++   M+     P+ +T+N L+ G 
Sbjct: 420 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 479

Query: 241 IRNNETSKVVELLHRMDE 258
            ++ +          M E
Sbjct: 480 CKSGDVEAARAFFDEMLE 497



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 134/247 (54%)

Query: 12  IQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           ++R +  +A  +S LI+G    G + +A  L      NGC  ++ TY  ++N   K K +
Sbjct: 216 VRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKI 275

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           +E++ L  ++ + G  PT+ TYN L +GL ++ ++E A+ L  ++  +    +  TY + 
Sbjct: 276 QEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 335

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
           IDGL K     EA +LF+ +      L    Y+ LI GL + GK+  A  +++++   G 
Sbjct: 336 IDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGC 395

Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
           +P+VVT + MI G    G++  A  +F  MEA+G+APN V ++ L+ G  +  +    +E
Sbjct: 396 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 455

Query: 252 LLHRMDE 258
           +L +M +
Sbjct: 456 MLAQMKK 462



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 121/262 (46%), Gaps = 47/262 (17%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A R+   M  RG+ PN  VYS LI G C   ++D A E+   M    C  + +TYN LI+
Sbjct: 418 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 477

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CK+ DVE +   + EML  G +P V TYN L  GL +    + A  + D+M  S    
Sbjct: 478 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-- 535

Query: 124 ETSTYNTFIDGLCKNG----------------------------------YIVEAAELFR 149
               Y++ +DGLCK+G                                   + EA  LF 
Sbjct: 536 ---VYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFN 592

Query: 150 TLRVLKCELGIE---AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
            +R    + G+    AY+ +I  L K GK+     ++Q + R    P+ VTYN +++G  
Sbjct: 593 AIR----KEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALLNGMI 647

Query: 207 NDGQMDKAHDLFLDMEAKGVAP 228
              +MD+AH  +L+M  +G  P
Sbjct: 648 GANRMDRAHYYYLEMTGRGYVP 669



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 35/286 (12%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +L   M  RG+  +   Y+ LI G   TG+I +A  ++ +M  +GC+ +VVT +T+I
Sbjct: 347 EAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 406

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   +  ++ ++  M ++G+ P  V Y+ L HGL +  +++ AL++  +M+ +   
Sbjct: 407 DGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 466

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY------------------- 163
            +T TYN  IDGLCK+G +  A   F  +    C+  +  Y                   
Sbjct: 467 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGV 526

Query: 164 -----------SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
                      S L+DGLCK GKLE    LF  + R G+  N  T   +I   C   ++D
Sbjct: 527 LDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVD 585

Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN---NETSKVVELLHR 255
           +A  LF  +  +G+ P+   +N+++   I++   NE   V + + R
Sbjct: 586 EAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR 630



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 129/255 (50%), Gaps = 2/255 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYNTL 61
           EA  LL   +    RP+   ++ LI G+CL  E + A  +   M+ + G   ++ T+N +
Sbjct: 137 EAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLV 196

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ++G CK+  V  +++ + E + + +  +  T++ L +GL +   +  A  L  E   +  
Sbjct: 197 LHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGC 255

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TY   ++ L KN  I EA  L   +    C   I  Y+ L++GLCK+G+LE A +
Sbjct: 256 TIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAID 315

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           L + +   G  P+VVTY  +I G   + +  +A+ LF +M ++G+A + V +  L+ G +
Sbjct: 316 LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLL 375

Query: 242 RNNETSKVVELLHRM 256
           +  +  +   +   M
Sbjct: 376 QTGKIPQASSVYKTM 390



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 124/245 (50%), Gaps = 1/245 (0%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           GV P+   ++ ++ G C +G++  A + F ++  +  + +  T++ LING  K   + ++
Sbjct: 185 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPV-SAATFSILINGLVKAGMMIQA 243

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
            +L  E  + G    + TY  + + L +  +++ A+ L +++  +      +TYN  ++G
Sbjct: 244 HSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNG 303

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK G + EA +L R +    C   +  Y+ LIDGL K  +   A++LF+ +   GL  +
Sbjct: 304 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALD 363

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
            V Y  +I G    G++ +A  ++  M + G  P+ VT +T++ G  +       V +  
Sbjct: 364 TVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 423

Query: 255 RMDER 259
            M+ R
Sbjct: 424 SMEAR 428



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 37/262 (14%)

Query: 35  EIDRARELF--VSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVT 92
           + D A ELF  +S    G  H+V T N L++ + +TK   E+ NL    L+   RP V T
Sbjct: 97  DADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVET 156

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHS-DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
           +N L  G     + E A  +  EM+    VA    T+N  + GLCK+G ++ A + F  +
Sbjct: 157 WNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAV 216

Query: 152 R----------------VLK------------------CELGIEAYSCLIDGLCKIGKLE 177
           R                ++K                  C + I  Y+ +++ L K  K++
Sbjct: 217 RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQ 276

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  L + +   G  P + TYN +++G C  G++++A DL   +   G  P+ VT+ +L+
Sbjct: 277 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 336

Query: 238 LGCIRNNETSKVVELLHRMDER 259
            G  +   + +  +L   M  R
Sbjct: 337 DGLGKEKRSFEAYKLFKEMASR 358



 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL--PRVGLMPNVVTYN 199
           +EAA L R  R +  +  ++ + CL D        + AWELFQ L  PR G   +V T N
Sbjct: 72  IEAA-LDRLRREISTDAVVKIFQCLKDA-------DLAWELFQCLSSPRFGFQHSVHTGN 123

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
            ++  F    +  +A +L  +  A    P+  T+N L+ G     E  +   ++  M+E
Sbjct: 124 ALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEE 182



 Score = 41.6 bits (96), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  L + + + G+ P+ + Y+++I     +G+++  + ++  M       + VTYN 
Sbjct: 584 VDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNA 641

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
           L+NG      ++ +   Y EM  +G  P V   + L
Sbjct: 642 LLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKL 677


>gi|449467965|ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
 gi|449468117|ref|XP_004151768.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
 gi|449532400|ref|XP_004173169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 125/227 (55%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A  ++   I+ GV P+   Y+TLIDG+C    +D A  +   M   G   +V+TYN+
Sbjct: 23  MQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITYNS 82

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +   +E+SL+L+ EML  GI P + +YNTL H  F + + + A ++F ++   D
Sbjct: 83  LIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKD 142

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++    T+NT I+GLCK+GY   A  LFR L+       +  Y+ LI+GLCK+ +L  A 
Sbjct: 143 LSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAI 202

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            +       GL PN VTY  ++       Q ++  ++F  M+ KG A
Sbjct: 203 RMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYA 249



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 124/233 (53%)

Query: 27  IDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
           +  FC + ++ +A  + +     G + +VVTYNTLI+GYC+   ++ + ++   M   GI
Sbjct: 14  VASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGI 73

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P V+TYN+L  G      +E +L LF+EM  S +  +  +YNT +      G   EA  
Sbjct: 74  SPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYR 133

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +F+ + +         ++ +I+GLCK G    A  LF++L R G +P +VTYNI+I+G C
Sbjct: 134 VFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLC 193

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
              ++  A  +  +    G+ PN VT+ TLM  C R+ +  +  E+  +M  +
Sbjct: 194 KVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNK 246



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 4/261 (1%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DEA R+   +I + + P+   ++T+I+G C  G    A  LF ++  +G +  +VTYN L
Sbjct: 129 DEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNIL 188

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING CK   +  ++ + +E +  G+ P  VTY TL    F   Q E   ++F +M++   
Sbjct: 189 INGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGY 248

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLETA 179
           A +   Y T      K G   EA   F   +++K ++GI+   Y+  I+  CK GKLE A
Sbjct: 249 AFDGFAYCTVSGAFLKLGRFEEAK--FCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAA 306

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           ++LF  +   GL  +V T++I+ +G C  G ++ A      +   G A N V  N L+  
Sbjct: 307 YKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDR 366

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +  +  + + L   M+ R+
Sbjct: 367 LCKAGQIDRAIRLFESMETRD 387



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 14/187 (7%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            +EA   ++ MI+  V  +   Y+T I+ +C  G+++ A +LF  ++  G   +V T++ 
Sbjct: 268 FEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLFDEIEPRGLECDVYTHSI 327

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           + NG C+  ++E ++   + + + G    +V  N L   L +  Q++ A++LF+ M+  D
Sbjct: 328 ITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLFESMETRD 387

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRT-----LRVLKCELGIEAYSCLIDGLCKIGK 175
               + TY + +  LCK      A++L  +     ++VLK          +IDGLC  G 
Sbjct: 388 ----SFTYTSLVHNLCKARRFRCASKLLISCSRDGMKVLK-----ATRRAVIDGLCSSGF 438

Query: 176 LETAWEL 182
              A +L
Sbjct: 439 TSEARKL 445



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 55/101 (54%)

Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
           C+   +  +  +   CK  +++ A  +     R+G++P+VVTYN +I G+C    MD A+
Sbjct: 3   CKYSTKFLNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAY 62

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            +   M   G++P+ +T+N+L+ G  RN    + ++L   M
Sbjct: 63  SVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEM 103



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 4/155 (2%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +L D +  RG+  + + +S + +G C  G I+ A +    +   G   N+V  N 
Sbjct: 303 LEAAYKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNC 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+  CK   ++ ++ L+  M ++       TY +L H L +  +   A KL        
Sbjct: 363 LIDRLCKAGQIDRAIRLFESMETR----DSFTYTSLVHNLCKARRFRCASKLLISCSRDG 418

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
           +    +T    IDGLC +G+  EA +L   LR+ +
Sbjct: 419 MKVLKATRRAVIDGLCSSGFTSEARKLKFKLRLAR 453



 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%)

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           NI +  FC   QM KA  + +D    GV P+ VT+NTL+ G  R +       +L+RM E
Sbjct: 11  NICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMRE 70


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 2/253 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A R L  M   G+ P+   Y+ ++ G+C  G + RA   F  M    C  NV TYNT+I
Sbjct: 97  RAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMG-KTCKPNVATYNTVI 155

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           NG CK   ++ +++L++ +    + P   TY+TL HGL +  ++E A+K++D M  ++  
Sbjct: 156 NGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYD 215

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI-GKLETAWE 181
            +   YN   DG CK   + EA E+ +T+   +C+  +  Y+C+I+G+C+   ++E A+ 
Sbjct: 216 GDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYR 275

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           LFQ +      PN VTY  MI G     ++ +  +LF  M   G++P+   +++L+   +
Sbjct: 276 LFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFV 335

Query: 242 RNNETSKVVELLH 254
           +  +  +   +L 
Sbjct: 336 KVRKLDEAKSILQ 348



 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 138/259 (53%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A ++ D+M++     +A  Y+ + DGFC    +D A E+  +M    C  +VVTYN 
Sbjct: 199 LEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNC 258

Query: 61  LINGYCKTKD-VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           +ING C+ K+ +EE+  L+ +M+     P  VTY T+  GL +I++V+  L+LF  M  +
Sbjct: 259 IINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKA 318

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK--LE 177
            ++ +   Y++ I    K   + EA  + +          +  Y+ LI G C+  K  ++
Sbjct: 319 GLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVD 378

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A  LFQ++    + PNV+TYNI++ G C  G+ D+A+ +F +M     +PN +TF  + 
Sbjct: 379 EALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMT 438

Query: 238 LGCIRNNETSKVVELLHRM 256
           +G I   +T K   +   M
Sbjct: 439 MGMIHCRKTDKFERIFMDM 457



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 3/228 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFC-LTGEIDRARELFVSMDINGCMHNVVTYN 59
           +DEA  +L  MIQR  +P+   Y+ +I+G C     I+ A  LF  M  + C  N VTY 
Sbjct: 234 VDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYG 293

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           T+I G  K  +V+  L L+  M   G+ P    Y++L +   ++ +++ A  +  +   +
Sbjct: 294 TMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARN 353

Query: 120 DVAAETSTYNTFIDGLC--KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
            V  +   Y T I G C  +   + EA  LF+ ++  +    +  Y+ ++ GLCK G+ +
Sbjct: 354 HVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFD 413

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
            A+++FQ + +V   PN +T+ +M  G  +  + DK   +F+DM  KG
Sbjct: 414 EAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVYKG 461



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA R     +    RP+ + ++ +I  FC      RA      M   G   +V  YN ++
Sbjct: 62  EAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVL 121

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYC    V  +L  + +M  K  +P V TYNT+ +GL +  +++ A+ LF  + H  V 
Sbjct: 122 KGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVD 180

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY+T + GLC+   +  A +++  +     +    AY+ + DG CK  +++ A E+
Sbjct: 181 PDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEV 240

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            +++ +    P+VVTYN +I+G C    ++++A+ LF  M      PN VT+ T++LG  
Sbjct: 241 LKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLS 300

Query: 242 RNNETSKVVELLHRMDE 258
           +  E  + +EL   M +
Sbjct: 301 KIYEVQRCLELFKGMSK 317



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 129/259 (49%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L   +    V P+ F YSTL+ G C    ++ A +++  M       +   YN 
Sbjct: 164 IDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNA 223

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEI-HQVEHALKLFDEMQHS 119
           + +G+CK + V+E+L +   M+ +  +P+VVTYN + +G+ +  +++E A +LF +M  S
Sbjct: 224 MADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGS 283

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
           D      TY T I GL K   +    ELF+ +          AY  LI    K+ KL+ A
Sbjct: 284 DCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEA 343

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCN--DGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
             + Q   R  + P+V  Y  +I G+C     ++D+A  LF +M+ + V PN +T+N ++
Sbjct: 344 KSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVL 403

Query: 238 LGCIRNNETSKVVELLHRM 256
            G  +     +  ++   M
Sbjct: 404 RGLCKTGRFDEAYQIFQEM 422



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 8/226 (3%)

Query: 39  ARELF-VSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF 97
           AR+ F  S    G  H+V  Y  L++   + +   E++  +   L    RP++ ++  + 
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 98  HGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
                +     A +    M+   +  + + YN  + G C  G +  A   F  +    C+
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGK-TCK 145

Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD---KA 214
             +  Y+ +I+GLCK GK++ A  LF  LP   + P+  TY+ ++HG C   +++   K 
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           +D+ L+    G A     +N +  G  +     + +E+L  M +R 
Sbjct: 206 YDMMLEANYDGDAG---AYNAMADGFCKERRVDEALEVLKTMIQRR 248


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 133/258 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+E   L + M   G+ P+   YST+I+     G ++ A  +   M + GC  NV T+ +
Sbjct: 259 MEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTS 318

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GY     + E+L+L++ M+ +G  P  V YNTL HGL    ++  A+ +  +M+ + 
Sbjct: 319 LMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNG 378

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V    +TY+T IDG  K G +V A+E++  +    C   +  Y+C++D LC+      A 
Sbjct: 379 VFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHAL 438

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L +++      PN +T+N  I G C  G+ + A  +   M   G APN  T+N ++ G 
Sbjct: 439 HLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGL 498

Query: 241 IRNNETSKVVELLHRMDE 258
                T + ++++  ++E
Sbjct: 499 FNAKRTREALQIVGEIEE 516



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 131/257 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA  L + MIQ G  PN   Y+TLI G C  G++  A  +   M+ NG   N  TY+TLI
Sbjct: 331 EALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLI 390

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G+ K  D+  +  ++++M++ G  P VV Y  +   L       HAL L + M + +  
Sbjct: 391 DGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCP 450

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             T T+NTFI GLC +G    A ++   +R   C   +  Y+ ++DGL    +   A ++
Sbjct: 451 PNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQI 510

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +  + +  N+VTYN ++ GFC+ G    A  +   +   G  P+ +T+NT++    +
Sbjct: 511 VGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCK 570

Query: 243 NNETSKVVELLHRMDER 259
             E    ++L+ R+ ++
Sbjct: 571 QGEVKTAIQLVDRLTKK 587



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 134/260 (51%), Gaps = 5/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A +LL  M  +G  P+A  Y+T++   C  G+++ AREL  SM I      V  YN 
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSF---VPVYNA 248

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C+   +EE   L++EM  +GI P V+TY+T+ + L E+  VE AL +  +M    
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    T+ + + G    G + EA +L+  +     E    AY+ LI GLC  GK+  A 
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAV 368

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            + Q + R G+ PN  TY+ +I GF   G +  A +++  M   G  PN V +  ++   
Sbjct: 369 SVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVL 428

Query: 241 IRNNETSKVVELLHRMDERN 260
            RN+  +  + L+  M   N
Sbjct: 429 CRNSMFNHALHLIENMANGN 448



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M EA  +   M + GV PN   YSTLIDGF   G++  A E++  M  NGC+ NVV Y  
Sbjct: 364 MVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTC 423

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++  C+      +L+L   M +    P  +T+NT   GL    + E A+K+ ++M+   
Sbjct: 424 MVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYG 483

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            A   +TYN  +DGL       EA ++   +  ++ +  +  Y+ ++ G C  G  + A 
Sbjct: 484 CAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGAL 543

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA-PNCVTFNTLMLG 239
           ++   L   G  P+ +TYN +I+ +C  G++  A  L   +  KG   P+  T+ +L+ G
Sbjct: 544 QIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWG 603



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 1/237 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           AS + + MI  G  PN  VY+ ++D  C     + A  L  +M    C  N +T+NT I 
Sbjct: 402 ASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIK 461

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G C +   E ++ + ++M   G  P V TYN +  GLF   +   AL++  E++  ++ +
Sbjct: 462 GLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKS 521

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TYNT + G C  G    A ++   L V   +     Y+ +I   CK G+++TA +L 
Sbjct: 522 NLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLV 581

Query: 184 QSLPRVGL-MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L + G   P+V TY  ++ G CN   +D+A      M  +G+ PN  T+N L+ G
Sbjct: 582 DRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRG 638



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 5/256 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D    LL LM   G+  N  ++  +I+ +   G  ++A + F  +   GC  +V  YN 
Sbjct: 89  IDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNH 148

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++        +    +Y+ M   GI   V TYN L   L +  +V+ A KL  EM +  
Sbjct: 149 VLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG 208

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +  +Y T +  +C+ G + EA EL   ++       +  Y+ LI+G C+  K+E  +
Sbjct: 209 CIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCREHKMEEVF 263

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ELF  +   G+ P+V+TY+ +I+     G ++ A  +   M  +G +PN  TF +LM G 
Sbjct: 264 ELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGY 323

Query: 241 IRNNETSKVVELLHRM 256
                  + ++L +RM
Sbjct: 324 FMGGRLCEALDLWNRM 339



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 5/218 (2%)

Query: 20  AFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYS 79
              Y+T+I       +ID  + L   M + G   N   +  +IN Y +    E++L  + 
Sbjct: 73  PLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFY 132

Query: 80  EMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
            +   G +P+V  YN +   L   ++ +    +++ M+   +     TYN  +  LCKN 
Sbjct: 133 RIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKND 192

Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
            +  A +L   +    C     +Y+ ++  +C++GK+E A EL   +        V  YN
Sbjct: 193 RVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYN 247

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            +I+GFC + +M++  +LF +M  +G+ P+ +T++T++
Sbjct: 248 ALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVI 285



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 1/134 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA +++  + +  ++ N   Y+T++ GFC  G    A ++   + + G   + +TYNT+I
Sbjct: 506 EALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVI 565

Query: 63  NGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
             YCK  +V+ ++ L   +  KG   P V TY +L  G+     V+ A+   D+M +  +
Sbjct: 566 YAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGI 625

Query: 122 AAETSTYNTFIDGL 135
               +T+N  + GL
Sbjct: 626 CPNRATWNALVRGL 639



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 8/104 (7%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH-NVVTYNTLINGYCKTKDVEE 73
           G +P++  Y+T+I  +C  GE+  A +L   +   G  + +V TY +L+ G C    V+E
Sbjct: 553 GTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDE 612

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFE-------IHQVEHAL 110
           ++    +M+++GI P   T+N L  GLF        IH V++ L
Sbjct: 613 AVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNIL 656


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 128/247 (51%), Gaps = 4/247 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A + L  M++RG+RP+   Y+ LID  C  G ++ A  LF  M   G + +VV+YNT
Sbjct: 374 ISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNT 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NGY K   ++++  L S M S G+ P +VTYN L HGL +   V  A  + DE+    
Sbjct: 434 LMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRG 493

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  T+   I G    G   EA  LF  +     E  +   S L++G C+   +  A 
Sbjct: 494 FSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEAN 553

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
            LF  +   GL  +V+ YN +IHGFC+ G +D A  L   M   G+ PN +T + L+LG 
Sbjct: 554 VLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGY 613

Query: 240 ---CIRN 243
              C+ N
Sbjct: 614 EKKCVEN 620



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 130/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           ++   +D++    + PN FV+++ I   C  G + +A ++F  M   G + +  +Y T++
Sbjct: 306 KSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMM 365

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            GYCK KD+  +L    +ML +GIRP+V TY  L     +   +E A  LF  M    + 
Sbjct: 366 AGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLV 425

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  +YNT ++G  K G++ +A EL   +R       +  Y+ LI GL K G +  A ++
Sbjct: 426 PDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDI 485

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              L R G  P+VVT+  +I GF N G  ++A  LF  M    + P+ VT + L+ G  R
Sbjct: 486 LDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCR 545

Query: 243 NNETSKVVELLHRM 256
               ++   L H+M
Sbjct: 546 TRCMAEANVLFHKM 559



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 133/260 (51%), Gaps = 3/260 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA+ +L  M Q GV  ++   S+++DG+C  G+ + A ++    +++    N+  +N+
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSP---NIFVFNS 328

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            I+  C   ++ ++  ++ +M   G+ P   +Y T+  G  ++  + +ALK   +M    
Sbjct: 329 FISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRG 388

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +TY   ID  CK G +  A  LF+ +        + +Y+ L++G  K G L+ A+
Sbjct: 389 IRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAF 448

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           EL   +   G+ P++VTYNI+IHG    G +++A D+  ++  +G +P+ VTF  ++ G 
Sbjct: 449 ELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGF 508

Query: 241 IRNNETSKVVELLHRMDERN 260
                  +   L   M E +
Sbjct: 509 SNKGNFEEAFLLFFYMSEHH 528



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 3/259 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   +LL  M   G++P+   Y+ +ID  C    +  A  +   M   G   + V+ ++
Sbjct: 237 IDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSS 296

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++GYCK    EE++++        + P +  +N+    L     +  A K+F +M    
Sbjct: 297 VVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMG 353

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y T + G CK   I  A +    +        +  Y+ LID  CK G +E A 
Sbjct: 354 LIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAE 413

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LFQ +   GL+P+VV+YN +++G+   G + KA +L   M + GV+P+ VT+N L+ G 
Sbjct: 414 YLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGL 473

Query: 241 IRNNETSKVVELLHRMDER 259
           I+    ++  ++L  +  R
Sbjct: 474 IKRGLVNEAKDILDELTRR 492



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 40/289 (13%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +L+  M    + P   V ++L+     + +++ A +    M   G   N    +  I+
Sbjct: 170 ALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFIS 229

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV-- 121
           GYC   +++    L  EM   GI+P VV Y  +   L ++  ++ A  +  +M    V  
Sbjct: 230 GYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFL 289

Query: 122 ------------------------------AAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
                                         +     +N+FI  LC +G +++AA++F+ +
Sbjct: 290 DSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDM 349

Query: 152 RVLKCELGI----EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
               CE+G+     +Y+ ++ G CK+  +  A +    + + G+ P+V TY ++I   C 
Sbjct: 350 ----CEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCK 405

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
            G M+ A  LF  M  +G+ P+ V++NTLM G  +     K  ELL  M
Sbjct: 406 PGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMM 454



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 32/235 (13%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            Y  L+N Y K    + +L L  +M    I P +   N+L   L E  Q+  A     EM
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           +   +    S  + FI G C  G I    +L   ++ L  +  + AY+ +ID LCK+  L
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 177 ETAWELFQSLPRVG--------------------------------LMPNVVTYNIMIHG 204
           + A  +   + ++G                                L PN+  +N  I  
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISK 332

Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            C DG M KA  +F DM   G+ P+C ++ T+M G  +  + S  ++ L +M +R
Sbjct: 333 LCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKR 387


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 141/258 (54%), Gaps = 1/258 (0%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           DE+  + + M +     + F YS+LI G C  G ID A  ++  +  +  + + VT+N +
Sbjct: 274 DESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAM 333

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +NG+C+   ++ES  L+  M  +  + TVV+YN L  GLFE  +VE A+ +++ +     
Sbjct: 334 LNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGC 392

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             E++TY   I GLCKNG + +A ++F+       +L   AYS ++DGLCK G+++ A  
Sbjct: 393 RPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAIS 452

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +   + + G   +    N +I+GF    +++ A + F +ME KG +P  V++NTL+ G  
Sbjct: 453 IVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLC 512

Query: 242 RNNETSKVVELLHRMDER 259
           +    S+    +  M E+
Sbjct: 513 KAERFSEAYSFVKEMLEK 530



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 144/258 (55%), Gaps = 4/258 (1%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGC--MHNVVTYNTL 61
           A ++ D M  RGV  +   Y+ LIDGF   G+ D+ +E++  + +  C    NVVTYN +
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERL-VKDCSVYPNVVTYNIM 263

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           ING CK    +ESL ++  M        + TY++L HGL E   ++ A++++ E+  S +
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T+N  ++G C+ G I E+ EL+  +    C+  + +Y+ LI GL + GK+E A  
Sbjct: 324 VVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAIS 382

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
           +++ L + G  P   TY ++IHG C +G+++KA  +F + E      +   +++++ G  
Sbjct: 383 IWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLC 442

Query: 242 RNNETSKVVELLHRMDER 259
           +     + + ++++MD+R
Sbjct: 443 KEGRMDEAISIVNQMDKR 460



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 134/250 (53%), Gaps = 1/250 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  +++ M +RG + +  V + LI+GF    +++ A   F  M+  GC   +V+YNT
Sbjct: 447 MDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNT 506

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G CK +   E+ +   EML K  +P ++T + L  GL +  ++E AL L+ +     
Sbjct: 507 LIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKG 566

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              + + YN  + GLC    + +A +L+  ++   C   +   + L++GL K+   E A 
Sbjct: 567 FKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKAS 626

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           E++  + + GL P++++YNI I G C+  ++  A +   D   +G+ P  VT+N L+   
Sbjct: 627 EIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAA 686

Query: 241 IRNNETSKVV 250
           + N  TS V+
Sbjct: 687 V-NFRTSSVL 695



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 131/252 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA  + +L+ ++G RP +  Y  LI G C  G +++A ++F   +      +   Y++
Sbjct: 377 VEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSS 436

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK   ++E++++ ++M  +G +      N L +G     ++E A+  F EM+   
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    +YNT I GLCK     EA    + +   + +  +   S L+DGLC+  K+E A 
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+Q     G  P++  YNI++HG C+  +++ A  L+  M+     PN VT NTLM G 
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616

Query: 241 IRNNETSKVVEL 252
            +  +  K  E+
Sbjct: 617 YKVRDYEKASEI 628



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 136/251 (54%), Gaps = 9/251 (3%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRAREL---FVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           G +P    Y+TL++ F    E DRA      F SMD++    N+ TYN LI   CK + +
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVS---PNLQTYNILIKISCKKQQI 167

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
           E++++L   M S+ ++P V +Y TL +G+ ++  +  ALK+FDEM    V A+ + YN  
Sbjct: 168 EKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNML 227

Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCEL--GIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
           IDG  K+G   +  E++  L V  C +   +  Y+ +I+GLCK G+ + + E+++ + + 
Sbjct: 228 IDGFFKHGDYDKGKEIWERL-VKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKN 286

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
               ++ TY+ +IHG C  G +D A  ++ ++    +  + VT N ++ G  R  +  + 
Sbjct: 287 EREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKES 346

Query: 250 VELLHRMDERN 260
            EL   M + N
Sbjct: 347 FELWMVMGKEN 357



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A R+   +++  +  +A  ++ +++GFC  G+I  + EL++ M    C   VV+YN 
Sbjct: 308 IDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNI 366

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G  +   VEE+++++  +  KG RP   TY  L HGL +  ++  ALK+F E +   
Sbjct: 367 LIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGP 426

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y++ +DGLCK G + EA  +   +     +L     + LI+G  +  KLE A 
Sbjct: 427 GKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAI 486

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
             F+ +   G  P +V+YN +I G C   +  +A+    +M  K   P+ +T + LM G 
Sbjct: 487 NFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGL 546

Query: 241 IRNNETSKVVELLHR 255
            +  +    + L  +
Sbjct: 547 CQEKKIEMALNLWQQ 561



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 121/236 (51%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           +A+ YS+++DG C  G +D A  +   MD  G   +    N LING+ +   +E+++N +
Sbjct: 430 DAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFF 489

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            EM  KG  PT+V+YNTL  GL +  +   A     EM   +   +  T +  +DGLC+ 
Sbjct: 490 REMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQE 549

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
             I  A  L++       +  I  Y+ L+ GLC + KLE A +L+  + R   +PN+VT 
Sbjct: 550 KKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTR 609

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           N ++ G       +KA +++  +   G+ P+ +++N  + G    +  S  +E L+
Sbjct: 610 NTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLN 665


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 135/271 (49%), Gaps = 16/271 (5%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM----DINGC-------- 51
           A+ L +LMI +G  PN   Y+ LIDG+C +G I++A +++  M    DI           
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKN 637

Query: 52  ----MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE 107
                 NVVTY  L++G CK   V+++ +L   M   G  P  + Y+ L  G  +  +++
Sbjct: 638 NVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLD 697

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            A ++F +M          TY++ ID L K+  +    ++   +    C   I  Y+ +I
Sbjct: 698 EAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMI 757

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           DGL K+ K + A++L   +   G  PNVVTY  MI GF   G++DK  +LF +M +KG A
Sbjct: 758 DGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCA 817

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           PN VT+  L+  C       +   LL  M +
Sbjct: 818 PNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848



 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 129/275 (46%), Gaps = 16/275 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A   LD M++ G  P    Y+TLI  +    ++  A ELF  M   GC  NV+TY  
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI----------------RPTVVTYNTLFHGLFEIH 104
           LI+GYCK+ ++E++  +Y+ M                     +P VVTY  L  GL + H
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659

Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
           +V+ A  L + M        T  Y+  IDG CK   + EA E+F  +        +  YS
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYS 719

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LID L K  +L+   ++   +      PN+V Y  MI G     + D+A+ L L ME K
Sbjct: 720 SLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEK 779

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           G  PN VT+  ++ G  +  +  K +EL   M  +
Sbjct: 780 GCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 133/275 (48%), Gaps = 16/275 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  L   M   GV P+ + Y+ LID F   G I +A      M  +GC   VVTY T
Sbjct: 505 VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTT 564

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ--- 117
           LI+ Y K K V  +  L+  M++KG  P V+TY  L  G  +   +E A +++  M+   
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDA 624

Query: 118 -----------HSDVAAETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
                       ++VA + +  TY   +DGLCK   + +A +L  T+ V  CE     Y 
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYD 684

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            LIDG CK  KL+ A E+F  +   G  PNV TY+ +I     D ++D    +   M   
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 744

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             APN V +  ++ G  +  +T +  +L+  M+E+
Sbjct: 745 SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEK 779



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 137/276 (49%), Gaps = 16/276 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
            ++A +++  M+  G  P+   YS +I   C    ++ A  LF  M   G + +V TY  
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ + K   ++++ N   EM+  G  PTVVTY TL H   +  +V  A +LF+ M    
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV----------------LKCELGIEAYS 164
                 TY   IDG CK+G I +A +++  +R                 +  +  +  Y 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
            L+DGLCK  K++ A +L +++   G  PN + Y+ +I GFC   ++D+A ++F  M   
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEH 709

Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
           G  PN  T+++L+    ++     V+++L +M E +
Sbjct: 710 GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 4/254 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D   ++L  M++    PN  +Y+ +IDG     + D A +L + M+  GC  NVVTY  
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTA 790

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G+ K   V++ L L+ EM SKG  P  VTY  L +       ++ A  L +EM+ + 
Sbjct: 791 MIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTY 850

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                S+Y   I+G  K  +I+    L    +     + I  Y  LID   K G+LE A 
Sbjct: 851 WPKHVSSYCKVIEGY-KREFILSLGLLEEVEKNGSAPI-ILLYKVLIDNFVKAGRLEVAL 908

Query: 181 ELFQSL--PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           EL + +    + +      Y  +I+ F    ++  A +LF DM   GV P+  TF  L++
Sbjct: 909 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968

Query: 239 GCIRNNETSKVVEL 252
           G IR     + ++L
Sbjct: 969 GLIRVRRWEEALQL 982



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 2/252 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL+ M   G  PN  VY  LIDGFC   ++D A+E+F  M  +G   NV TY++
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSS 720

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K K ++  L + S+ML     P +V Y  +  GL ++ + + A KL   M+   
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                 TY   IDG  K G + +  ELFR +    C      Y+ LI+  C  G L+ A+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L + + +     +V +Y  +I G+  +  +     L  ++E  G AP  + +  L+   
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLG--LLEEVEKNGSAPIILLYKVLIDNF 898

Query: 241 IRNNETSKVVEL 252
           ++       +EL
Sbjct: 899 VKAGRLEVALEL 910



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 114/271 (42%), Gaps = 16/271 (5%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +  + M+  G   N     +     C  G+ ++A ++   M  NG + +  TY+ +I 
Sbjct: 438 AEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
             C    VE +  L+ EM   G+ P V TY  L     +   ++ A    DEM       
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              TY T I    K   +  A ELF  +    C   +  Y+ LIDG CK G +E A +++
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIY 617

Query: 184 ------QSLPRVGLM----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
                   +P V +           PNVVTY  ++ G C   ++  A DL   M   G  
Sbjct: 618 ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCE 677

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           PN + ++ L+ G  +  +  +  E+ H+M E
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 116/290 (40%), Gaps = 41/290 (14%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L L+ +    PN  +Y+ +I G C     + A +    M    C+ NV TY  L+ G   
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            K +     + S M+++G  P+   +N+L H   +     +A KL  +M+  +       
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415

Query: 128 YNTFIDGLCKNGYI----------------VEAAELFRTLRVLK-----CELG------- 159
           YN  I  +C  G +                + A  +   + V+      C  G       
Sbjct: 416 YNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYK 475

Query: 160 -------------IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
                           YS +I  LC   ++E A+ LF+ +   G++P+V TY I+I  F 
Sbjct: 476 VIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFS 535

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G + +AH+   +M   G  P  VT+ TL+   ++  + S   EL   M
Sbjct: 536 KAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELM 585



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 108/282 (38%), Gaps = 45/282 (15%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M + G+  + F         C  G+   A  L    D    + N + YN 
Sbjct: 257 LDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDF---VPNTILYNK 313

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G C+    EE+++  + M S    P V TY  L  G     Q+    ++   M    
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG----------- 169
                + +N+ +   CK+     A +L + +   +C+ G   Y+ LI             
Sbjct: 374 CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV 433

Query: 170 ------------------------------LCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
                                         LC  GK E A+++   +   G +P+  TY+
Sbjct: 434 TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYS 493

Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
            +I   CN  +++ A  LF +M+  GV P+  T+ T+++ C 
Sbjct: 494 EVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY-TILIDCF 534



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 7/248 (2%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVV--TYNTLINGYCKTKD 70
           Q G      VY  L+D F   G  DR  E F+  +I G    V+    N LI   C+   
Sbjct: 164 QIGYDHTPAVYIALLDVF-ERGSYDRVPEEFLR-EIRGDDKEVLGKLLNVLIRKCCRNGL 221

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
              +L     +   G +PT +TYN L        +++ A  +  EM    ++ +  T   
Sbjct: 222 WNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGF 281

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
           F   LCK G   EA  L      +   +    Y+ +I GLC+    E A +    +    
Sbjct: 282 FAQALCKVGKWREALSLIEKEDFVPNTI---LYNKMISGLCEASFFEEAMDFLNRMRSTS 338

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
            +PNV TY I++ G  N  Q+ +   +   M A+G  P+   FN+L+    ++++ S   
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 251 ELLHRMDE 258
           +LL +M++
Sbjct: 399 KLLKKMEK 406



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 39/195 (20%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA--------------------- 39
           +D+   L   M  +G  PN   Y+ LI+  C TG +D A                     
Sbjct: 801 VDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCK 860

Query: 40  ------RELFVSMDI------NGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
                 RE  +S+ +      NG    ++ Y  LI+ + K   +E +L L+ E++S  + 
Sbjct: 861 VIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMS 920

Query: 88  PTVVT--YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
                  Y +L +      ++ HA +LF +M    V  +  T+   + GL +     EA 
Sbjct: 921 MAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEAL 980

Query: 146 ELFRTLRVLKCELGI 160
           +L  +L    C++ I
Sbjct: 981 QLSDSL----CQMDI 991


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 134/254 (52%), Gaps = 1/254 (0%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +LD M++    PN    + +I+  C  G + +       M  +GC  NVVTYN +I
Sbjct: 286 DADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVI 345

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G C+  +V+ +L L S M S G +P +VTYNT+  GL    + E A +L  +M  +D  
Sbjct: 346 SGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 405

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            + ST+NT I   C+ G I++A E+F+ +    C      YS +I GL K GK+E A EL
Sbjct: 406 PDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALEL 465

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              +   G   + + Y ++      + ++++   +   ++  G++P  V +NT++LG  R
Sbjct: 466 LNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCR 524

Query: 243 NNETSKVVELLHRM 256
           N +T   +++L  M
Sbjct: 525 NGKTDYAIDVLADM 538



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+D M   G  PN   Y+ +ID  C  G++D+AREL  S+   GC  N V YNT++
Sbjct: 216 QALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVL 275

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G+C  +   ++  +  EM+ +   P   T N + + L     ++      ++M      
Sbjct: 276 KGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCT 335

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
           A   TYN  I G+C+ G +  A EL   ++   C+  I  Y+ ++ GLC   + E A EL
Sbjct: 336 ANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEEL 395

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
              + +   +P+  T+N +I  +C  G + +A ++F  M  KG  PN  T++T++ G  +
Sbjct: 396 MIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTK 455

Query: 243 NNETSKVVELLHRM 256
             +  + +ELL+ M
Sbjct: 456 AGKMEQALELLNEM 469



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 126/253 (49%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           +LD M+ RG  P+   Y+ L+   C      +A EL   M   GC  N VTYN +I+  C
Sbjct: 185 VLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMC 244

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
           +  DV+++  L + + S+G +P  V YNT+  G   I +   A ++ DEM   +     +
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           T N  I+ LC+ G + +       +    C   +  Y+ +I G+C+ G +++A EL  ++
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
              G  P++VTYN ++ G C+  + + A +L + M      P+  TFNT++    +    
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424

Query: 247 SKVVELLHRMDER 259
            +  E+  +M E+
Sbjct: 425 LQAFEVFKQMPEK 437



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 123/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A R++  M       +A+ ++ LI   C  G +  A  +   M   GC  +VVTYN 
Sbjct: 144 LEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNI 203

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK +   ++L L   M ++G  P  VTYN +   +     V+ A +L + +    
Sbjct: 204 LLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRG 263

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               T  YNT + G C     V+A E+   +    C       + +I+ LC+ G L+   
Sbjct: 264 CKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVT 323

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + + + G   NVVTYN +I G C  G +D A +L  +M++ G  P+ VT+NT++ G 
Sbjct: 324 LYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGL 383

Query: 241 IRNNETSKVVELLHRMDERN 260
              +      EL+ +M + +
Sbjct: 384 CSADRWEDAEELMIKMSQND 403



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 120/253 (47%), Gaps = 1/253 (0%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           L+ M + G   N   Y+ +I G C  G +D A EL  +M   GC  ++VTYNT++ G C 
Sbjct: 326 LEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCS 385

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
               E++  L  +M      P   T+NT+     +   +  A ++F +M        ++T
Sbjct: 386 ADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTT 445

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y+T I GL K G + +A EL   +   K     + Y  L + L K  K+E   ++   L 
Sbjct: 446 YSTIIGGLTKAGKMEQALELLNEM-ANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQ 504

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
             G+ P  V YN ++ G C +G+ D A D+  DM + G  P+  T+  L+ G      + 
Sbjct: 505 DSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSK 564

Query: 248 KVVELLHRMDERN 260
           +  ELL R+  R+
Sbjct: 565 EARELLSRLCSRD 577



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 16/268 (5%)

Query: 4   ASRLLDLMIQRG-------------VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING 50
           A R L  +I RG               P+  + + L+   C  G   R  +    ++  G
Sbjct: 67  ADRRLSALIHRGDLDAALRLVGSSPRPPDVPLANRLVRDLCRRG---RPADAARVVEACG 123

Query: 51  CMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
                 TY  L++GYC+   +E++  +   M +     +   +N L H L E  +V  AL
Sbjct: 124 PEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADAL 183

Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
            + D M     A +  TYN  +   CK     +A EL   +R   CE     Y+ +ID +
Sbjct: 184 VVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAM 243

Query: 171 CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
           C+ G ++ A EL  SLP  G  PN V YN ++ GFC+  +   A ++  +M  +   PN 
Sbjct: 244 CREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNE 303

Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDE 258
            T N ++    R     KV   L +M +
Sbjct: 304 ATLNVIINTLCRKGLLQKVTLYLEKMSK 331



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 1/238 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  LL  M   G +P+   Y+T++ G C     + A EL + M  N  + +  T+NT
Sbjct: 354 VDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNT 413

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ +C+   + ++  ++ +M  KG  P   TY+T+  GL +  ++E AL+L +EM +  
Sbjct: 414 IISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG 473

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y    + L K   I E  ++   L+          Y+ ++ GLC+ GK + A 
Sbjct: 474 FNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAI 532

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
           ++   +   G MP+  TY I+I G   +G   +A +L   + ++ V  N +  N  +L
Sbjct: 533 DVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEALL 590


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 139/272 (51%), Gaps = 17/272 (6%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  LL  MI   + P  + +S LID FC  G++  A+ +F  M       N+VTYN+
Sbjct: 203 LKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNS 262

Query: 61  LINGY--------------CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQV 106
           L++G+                 K V+E++NL+ EM  K I P +V YN+L  GL +  + 
Sbjct: 263 LMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRT 322

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
            +ALK   EM +     +  TYN+ +D LCKN ++ +A EL   L+    +  +  Y+ L
Sbjct: 323 PYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNIL 382

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           I+GLCK G+L+ A ++F+ L   G   +V TYN MI GFC  G  D+   +   M+  G 
Sbjct: 383 INGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGC 442

Query: 227 AP---NCVTFNTLMLGCIRNNETSKVVELLHR 255
           +P   NC      +     N++  K  E++ R
Sbjct: 443 SPDAKNCEIIIRSLFDKGENDKAGKFREMIVR 474



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 138/271 (50%), Gaps = 14/271 (5%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A    D ++ +G + N   Y TLI+G C  G+   A E    +D      +VV YNT+I
Sbjct: 100 KALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTII 159

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK K V ++ NLY EM++K I P+VVTYNTL  GL  + Q++ A+ L  +M   D+ 
Sbjct: 160 DGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDIN 219

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG-----LCKIGK-- 175
               T++  ID  CK G + EA  +F  +     +  I  Y+ L+DG     + K  K  
Sbjct: 220 PTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSI 279

Query: 176 -------LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
                  ++ A  LF+ +    + P++V YN +I G C  G+   A     +M  +G  P
Sbjct: 280 FNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPP 339

Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +  T+N+L+    +N    K +ELL ++ ++
Sbjct: 340 DIFTYNSLLDALCKNYHVDKAIELLTKLKDQ 370



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 139/272 (51%), Gaps = 14/272 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++A  L   M+ + + P+   Y+TLI G C+  ++  A  L   M +      V T++ 
Sbjct: 168 VNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSI 227

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------------LFE--IHQV 106
           LI+ +CK   ++E+ N+++ M+ + ++P +VTYN+L  G            +F   I  V
Sbjct: 228 LIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMV 287

Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
           + A+ LF+EM    +  +   YN+ IDGLCK+G    A +    +        I  Y+ L
Sbjct: 288 DEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSL 347

Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
           +D LCK   ++ A EL   L   G+ P+V TYNI+I+G C  G++  A  +F D+  KG 
Sbjct: 348 LDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGY 407

Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             +  T+N ++ G  +     + + ++ +M +
Sbjct: 408 NTDVYTYNAMIKGFCKKGLFDETLAMVSKMKD 439



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 126/242 (52%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
           G+  N    S LI+ +   G+   +  +F ++   G   + +T+ TLI G C   ++ ++
Sbjct: 42  GLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKA 101

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
           L+ + +++++G +   V+Y TL +GL ++ Q   AL+    +    V  +   YNT IDG
Sbjct: 102 LHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDG 161

Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           LCK+  + +A  L+  +   +    +  Y+ LI GLC + +L+ A  L   +    + P 
Sbjct: 162 LCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPT 221

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           V T++I+I  FC +G+M +A ++F  M  + V PN VT+N+LM G    N   K   + +
Sbjct: 222 VYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFN 281

Query: 255 RM 256
            M
Sbjct: 282 TM 283



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 35/247 (14%)

Query: 10  LMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
           L+  +   P+ F +  ++              L   M+ NG   N+VT + LIN Y +  
Sbjct: 2   LLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLG 61

Query: 70  DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
               S ++++ +L KG     +T+ TL                                 
Sbjct: 62  QNALSFSVFANILKKGYGSDAITFTTL--------------------------------- 88

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
             I GLC  G I +A      +     +L   +Y  LI+GLCK+G+   A E  + +   
Sbjct: 89  --IKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGK 146

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
            + P+VV YN +I G C D  ++ A +L+ +M AK + P+ VT+NTL+ G     +    
Sbjct: 147 LVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDA 206

Query: 250 VELLHRM 256
           + LLH+M
Sbjct: 207 IGLLHKM 213



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 63/144 (43%)

Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
           + H +       +   +  L K  +      L R +        +   S LI+   ++G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
              ++ +F ++ + G   + +T+  +I G C  G++ KA      + A+G   N V++ T
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           L+ G  +  +T   +E L R+D +
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGK 146


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 131/258 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M  A  +++ M  +GV  +   Y++L+ GF  +G+ D A E+   M  +G   NVVTY  
Sbjct: 203 MAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTA 262

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  YCK K ++E+ +LY  M+  G+ P VVT + L  GL    Q   A  LF EM    
Sbjct: 263 LIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIG 322

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           VA    TY T ID L K     E+  L   +      + +  Y+ L+D L K GK+E A 
Sbjct: 323 VAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAK 382

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++ +      + PN VTY +++   C  G +D A  + L ME K V PN VTF++++ G 
Sbjct: 383 DVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGL 442

Query: 241 IRNNETSKVVELLHRMDE 258
           ++     K  + + +M +
Sbjct: 443 VKRGCLGKAADYMRKMKD 460



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 124/260 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MDEA  L + M++ GV P+    S L+DG C  G+   A  LF  MD  G   N VTY T
Sbjct: 273 MDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCT 332

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+   K +   ESL L  EM+S+G+   +V Y  L   L +  ++E A  +    Q  +
Sbjct: 333 LIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDN 392

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY   +D  C+ G I  A ++   +        +  +S +I+GL K G L  A 
Sbjct: 393 ITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAA 452

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +  + +   G+ PNVVTY  +I GF      + A D++ DM  +GV  N    ++L+ G 
Sbjct: 453 DYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGL 512

Query: 241 IRNNETSKVVELLHRMDERN 260
            +N        L   MDER 
Sbjct: 513 RKNGNIEGAEALFKDMDERG 532



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 130/256 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++L  M ++ V PN   +S++I+G    G + +A +    M  +G   NVVTY T
Sbjct: 413 IDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K +  E +L++Y +ML +G+       ++L +GL +   +E A  LF +M    
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y T +DGL K G +  A ++ + L           Y+  I+ LC +GK   A 
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
              + +   GL P+  TYN MI   C +G+  KA  L  +M+   + PN +T+ TL++G 
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652

Query: 241 IRNNETSKVVELLHRM 256
           +      K   LL+ M
Sbjct: 653 LEAGVVKKAKFLLNEM 668



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 120/252 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A+  +  M   G+ PN   Y TLIDGF      + A +++  M   G   N    ++
Sbjct: 448 LGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDS 507

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+NG  K  ++E +  L+ +M  +G+    V Y TL  GLF+   +  A K+  E+   +
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++ +   YN FI+ LC  G   EA    + +R    E     Y+ +I   C+ GK   A 
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L + + R  + PN++TY  ++ G    G + KA  L  +M + G AP  +T   ++  C
Sbjct: 628 KLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQAC 687

Query: 241 IRNNETSKVVEL 252
             +     ++E+
Sbjct: 688 SGSRRPDVILEI 699



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 118/238 (49%), Gaps = 6/238 (2%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRA---RELFV-SMDINGCMHNVVTYN 59
           A  +L  M +RGV  +    ST + G C TG +  A    E+ V    I+G   +VV +N
Sbjct: 134 APPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGL--DVVGWN 191

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI+GYCK +D+  +L +   M ++G+   VV YN+L  G F     + AL++ + M+  
Sbjct: 192 ALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKAD 251

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V     TY   I   CK   + EA  L+  +        +   S L+DGLC+ G+   A
Sbjct: 252 GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEA 311

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           + LF+ + ++G+ PN VTY  +I       +  ++  L  +M ++GV  + V +  LM
Sbjct: 312 YALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALM 369



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 134/329 (40%), Gaps = 71/329 (21%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLT---------------------------- 33
            EA  L   M + GV PN   Y TLID                                 
Sbjct: 309 SEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTAL 368

Query: 34  -------GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE-------------- 72
                  G+I+ A+++      +    N VTY  L++ +C+  +++              
Sbjct: 369 MDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSV 428

Query: 73  ---------------------ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK 111
                                ++ +   +M   GI P VVTY TL  G F+    E AL 
Sbjct: 429 IPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALD 488

Query: 112 LFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLC 171
           ++ +M H  V A     ++ ++GL KNG I  A  LF+ +      L    Y+ L+DGL 
Sbjct: 489 VYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLF 548

Query: 172 KIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
           K G +  A+++ Q L    L P+ V YN+ I+  C  G+  +A     +M   G+ P+  
Sbjct: 549 KTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQA 608

Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
           T+NT++    R  +TSK ++LL  M +RN
Sbjct: 609 TYNTMIAARCREGKTSKALKLLKEM-KRN 636



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 35/294 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
            EA   L  M   G+ P+   Y+T+I   C  G+  +A +L   M  N    N++TY TL
Sbjct: 589 SEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTL 648

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVT----------------------------- 92
           + G  +   V+++  L +EM S G  PT +T                             
Sbjct: 649 VVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGL 708

Query: 93  ------YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
                 YNTL H L       +A  + DEM    +A +T T+N  I G CK+ ++  A  
Sbjct: 709 HADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFA 768

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           ++  +        I  ++ L+ GL   G++  A  +   + +VGL PN +TY+I++ G+ 
Sbjct: 769 IYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYA 828

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
                 +A  L+ +M +KG  P   T+N+LM    +    ++  EL   M  R 
Sbjct: 829 KKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRG 882



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 39/284 (13%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M+  GV  N FV  +L++G    G I+ A  LF  MD  G + + V Y TL++G  KT +
Sbjct: 493 MLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGN 552

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           +  +  +  E++ K + P  V YN   + L  + +   A     EM+++ +  + +TYNT
Sbjct: 553 MPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNT 612

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I   C+ G   +A +L + ++    +  +  Y+ L+ GL + G ++ A  L   +   G
Sbjct: 613 MIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAG 672

Query: 191 LMPNVVT-----------------------------------YNIMIHGFCNDGQMDKAH 215
             P  +T                                   YN ++H  C  G    A 
Sbjct: 673 FAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNAT 732

Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIR----NNETSKVVELLHR 255
            +  +M  +G+AP+ +TFN L+LG  +    +N  +   ++LH+
Sbjct: 733 VVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ 776



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 35/292 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF------------------ 43
            +A +LL  M +  ++PN   Y+TL+ G    G + +A+ L                   
Sbjct: 624 SKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRV 683

Query: 44  -----------VSMDIN------GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
                      V ++I+      G   ++  YNTL++  C       +  +  EML++GI
Sbjct: 684 LQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGI 743

Query: 87  RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
            P  +T+N L  G  +   +++A  ++ +M H  ++   +T+NT + GL   G I EA  
Sbjct: 744 APDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADT 803

Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
           +   ++ +  E     Y  L+ G  K      A  L+  +   G +P   TYN ++  F 
Sbjct: 804 VLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFA 863

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             G M++A +LF +M+ +GV     T++ L+ G  +     +V  LL  M E
Sbjct: 864 KAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKE 915



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 89/189 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  +   M+ +G+ PN   ++TL+ G    G I  A  +   M   G   N +TY+ 
Sbjct: 763 LDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDI 822

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ GY K  +  E+L LY EM+SKG  P   TYN+L     +   +  A +LF EM+   
Sbjct: 823 LVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRG 882

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V   +STY+  ++G  K    +E   L + ++ L  +      S +     + G    A 
Sbjct: 883 VLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEAR 942

Query: 181 ELFQSLPRV 189
            L ++L +V
Sbjct: 943 RLLKTLFKV 951



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 6/190 (3%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLY----SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA 109
           + +T N++I  YC  + +  +L+L            +    V+YN     L E      A
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 110 LKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYSCLI 167
             +  EM    V+ +  T +T + GLC+ G + EAA L   L   +   G++   ++ LI
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
           DG CK+  +  A  + + +   G+  +VV YN ++ GF + G  D A ++   M+A GV 
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVE 254

Query: 228 PNCVTFNTLM 237
           PN VT+  L+
Sbjct: 255 PNVVTYTALI 264


>gi|242051268|ref|XP_002463378.1| hypothetical protein SORBIDRAFT_02g042720 [Sorghum bicolor]
 gi|241926755|gb|EER99899.1| hypothetical protein SORBIDRAFT_02g042720 [Sorghum bicolor]
          Length = 782

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 126/229 (55%), Gaps = 4/229 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING--CMHNVVTYNTLINGYCKT 68
           M+Q G +P+    +T+I GFC +G    AR +   M ++G  C  +VVT+ TLI+GY   
Sbjct: 405 MLQAGCKPDVITMNTVIHGFCKSGRTQEARRIMDDM-LSGKFCAPDVVTFTTLISGYLGA 463

Query: 69  KDVEESLN-LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            D  E+L+ L++ M  +   PTVVTYN +  GLF I QV+ A+++ +EM  + + A++ T
Sbjct: 464 GDHAEALDVLHNLMPRRRCSPTVVTYNCVLKGLFGIGQVDTAMQVLEEMSANKIVADSVT 523

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y   I GLC  G + +A E +  +           YS +  GLCK  KLE A +    L 
Sbjct: 524 YTVVIKGLCDAGLLEKAKEFWDNVVWPSGIHDDYVYSAIFKGLCKQKKLEQACDFLYELV 583

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             G+ P+VV YNI+I   C  G    A+ L  +M+  G+AP+ VT+  L
Sbjct: 584 DCGVAPSVVCYNILIDAACKQGSNKLAYQLVKEMKRNGLAPDAVTWRIL 632



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 23/251 (9%)

Query: 26  LIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
           L+   C  G +  A  L + M   G   + V+Y  L++GY +  D   +  L  EM ++G
Sbjct: 95  LLAHLCRAGHVLLAHRLLLRM---GAAPDAVSYAALLDGYARVPDPRAARRLLDEMPARG 151

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFD----------------EMQHSDVAAETSTYN 129
           + PT +  + L   L     V+ A++L D                     D     + + 
Sbjct: 152 VVPTSLARSFLAKALLRARDVDAAMRLVDTALWPPNGVAGGDRLGGGGEEDQEVTNAAFA 211

Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIGKLETAWELFQSLPR 188
             +  LC  G+      +   +   +C +G + AYS +ID LC+ G+   A  +   + +
Sbjct: 212 NLVQCLCAEGFFHVVFRVAEEMPQRRCGVGDDFAYSQMIDSLCRAGQHHGASRIVYIMRK 271

Query: 189 VGLMPNVVTYNIMIHGFCND---GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
            G+ P+ V+YN ++HG C     G   +AH L ++  + G     VT+  L+    R NE
Sbjct: 272 RGMRPSDVSYNCIVHGLCTSPKPGACLRAHQLVMEGTSFGYRLREVTYKVLVDELCRENE 331

Query: 246 TSKVVELLHRM 256
            +K  ++L  M
Sbjct: 332 LAKAKDVLELM 342



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 4/220 (1%)

Query: 3   EASRLLDLMIQ-RGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYNT 60
           EA R++D M+  +   P+   ++TLI G+   G+   A ++  + M    C   VVTYN 
Sbjct: 432 EARRIMDDMLSGKFCAPDVVTFTTLISGYLGAGDHAEALDVLHNLMPRRRCSPTVVTYNC 491

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           ++ G      V+ ++ +  EM +  I    VTY  +  GL +   +E A + +D +    
Sbjct: 492 VLKGLFGIGQVDTAMQVLEEMSANKIVADSVTYTVVIKGLCDAGLLEKAKEFWDNVVWPS 551

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   Y+    GLCK   + +A +    L        +  Y+ LID  CK G  + A+
Sbjct: 552 GIHDDYVYSAIFKGLCKQKKLEQACDFLYELVDCGVAPSVVCYNILIDAACKQGSNKLAY 611

Query: 181 ELFQSLPRVGLMPNVVTYNIM--IHGFCNDGQMDKAHDLF 218
           +L + + R GL P+ VT+ I+  +H +  + Q    H  F
Sbjct: 612 QLVKEMKRNGLAPDAVTWRILSKLHHYDKEEQEGNQHQTF 651



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 9/218 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +L+LM+Q  V+          D     GE  R R   V +   G       YN  +
Sbjct: 334 KAKDVLELMLQPTVQCGQ-------DSSGDAGEETRTRLYNVFLGALGEETRTRIYNVFL 386

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV- 121
                  +  E L +   ML  G +P V+T NT+ HG  +  + + A ++ D+M      
Sbjct: 387 GALRVVDNPSEQLGVLVSMLQAGCKPDVITMNTVIHGFCKSGRTQEARRIMDDMLSGKFC 446

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRV-LKCELGIEAYSCLIDGLCKIGKLETAW 180
           A +  T+ T I G    G   EA ++   L    +C   +  Y+C++ GL  IG+++TA 
Sbjct: 447 APDVVTFTTLISGYLGAGDHAEALDVLHNLMPRRRCSPTVVTYNCVLKGLFGIGQVDTAM 506

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
           ++ + +    ++ + VTY ++I G C+ G ++KA + +
Sbjct: 507 QVLEEMSANKIVADSVTYTVVIKGLCDAGLLEKAKEFW 544



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 109/269 (40%), Gaps = 33/269 (12%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLT---GEIDRARELFVSMDINGCMHNVVTYNT 60
           ASR++ +M +RG+RP+   Y+ ++ G C +   G   RA +L +     G     VTY  
Sbjct: 262 ASRIVYIMRKRGMRPSDVSYNCIVHGLCTSPKPGACLRAHQLVMEGTSFGYRLREVTYKV 321

Query: 61  LINGYC------KTKDV---------------------EESLNLYSEMLSK-GIRPTVVT 92
           L++  C      K KDV                     E    LY+  L   G       
Sbjct: 322 LVDELCRENELAKAKDVLELMLQPTVQCGQDSSGDAGEETRTRLYNVFLGALGEETRTRI 381

Query: 93  YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
           YN     L  +      L +   M  +    +  T NT I G CK+G   EA  +   + 
Sbjct: 382 YNVFLGALRVVDNPSEQLGVLVSMLQAGCKPDVITMNTVIHGFCKSGRTQEARRIMDDML 441

Query: 153 VLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQ 210
             K C   +  ++ LI G    G    A ++  +L PR    P VVTYN ++ G    GQ
Sbjct: 442 SGKFCAPDVVTFTTLISGYLGAGDHAEALDVLHNLMPRRRCSPTVVTYNCVLKGLFGIGQ 501

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +D A  +  +M A  +  + VT+  ++ G
Sbjct: 502 VDTAMQVLEEMSANKIVADSVTYTVVIKG 530



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 114/272 (41%), Gaps = 38/272 (13%)

Query: 6   RLLDLMIQR--GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           R+ + M QR  GV  + F YS +ID  C  G+   A  +   M   G   + V+YN +++
Sbjct: 228 RVAEEMPQRRCGVG-DDFAYSQMIDSLCRAGQHHGASRIVYIMRKRGMRPSDVSYNCIVH 286

Query: 64  GYCKTKDVEESL---NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
           G C +      L    L  E  S G R   VTY  L   L   +++  A  + + M    
Sbjct: 287 GLCTSPKPGACLRAHQLVMEGTSFGYRLREVTYKVLVDELCRENELAKAKDVLELMLQPT 346

Query: 117 ------QHSDVAAETST--YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
                    D   ET T  YN F+  L          E  RT            Y+  + 
Sbjct: 347 VQCGQDSSGDAGEETRTRLYNVFLGAL---------GEETRT----------RIYNVFLG 387

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVA 227
            L  +        +  S+ + G  P+V+T N +IHGFC  G+  +A  +  DM   K  A
Sbjct: 388 ALRVVDNPSEQLGVLVSMLQAGCKPDVITMNTVIHGFCKSGRTQEARRIMDDMLSGKFCA 447

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           P+ VTF TL+ G +   + ++ +++LH +  R
Sbjct: 448 PDVVTFTTLISGYLGAGDHAEALDVLHNLMPR 479



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 68/128 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A ++L+ M    +  ++  Y+ +I G C  G +++A+E + ++     +H+   Y+ 
Sbjct: 502 VDTAMQVLEEMSANKIVADSVTYTVVIKGLCDAGLLEKAKEFWDNVVWPSGIHDDYVYSA 561

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +  G CK K +E++ +   E++  G+ P+VV YN L     +    + A +L  EM+ + 
Sbjct: 562 IFKGLCKQKKLEQACDFLYELVDCGVAPSVVCYNILIDAACKQGSNKLAYQLVKEMKRNG 621

Query: 121 VAAETSTY 128
           +A +  T+
Sbjct: 622 LAPDAVTW 629


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 129/244 (52%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           E  +L   M ++G+  +   Y+T+IDGFC +G++D+A +L   M   G    VVTY +++
Sbjct: 605 ETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVV 664

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G  K   ++E+  L+ E  S G+   VV Y++L  G  ++ +++ A  + +E+    + 
Sbjct: 665 DGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 724

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
             + T+N  +D L K   I EA   F+ ++ LKC      YS +I+GLC I K   A+  
Sbjct: 725 PNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVF 784

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +Q + + GL PN +TY  MI G    G + +A  LF   +A G  P+   +N ++ G   
Sbjct: 785 WQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSS 844

Query: 243 NNET 246
            N+ 
Sbjct: 845 ANKA 848



 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 133/245 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L + M+     PN  VY++LI  F   G  +   +++  M   GC  +++  N+
Sbjct: 498 VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNS 557

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
            ++   K  +VE+   L+ E+ ++G+ P V +Y+ L HGL +        KLF EM+   
Sbjct: 558 YMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQG 617

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   YNT IDG CK+G + +A +L   ++    +  +  Y  ++DGL KI +L+ A+
Sbjct: 618 LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAY 677

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+    +G+  NVV Y+ +I GF   G++D+A+ +  ++  KG+ PN  T+N L+   
Sbjct: 678 MLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDAL 737

Query: 241 IRNNE 245
           ++  E
Sbjct: 738 VKAEE 742



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 127/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A ++ D M + G+ PN    + +ID  C   ++D A  +F+ +D   C  +  T+ +
Sbjct: 428 LEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCS 487

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G  +   V+++ +LY +ML     P VV Y +L    F+  + E   K++ EM H  
Sbjct: 488 LIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRG 547

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +    N+++D + K G + +   LF  ++       + +YS LI GL K G     +
Sbjct: 548 CSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETY 607

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +LF  +   GL  +V+ YN +I GFC  G++DKA+ L  +M+ KG+ P  VT+ +++ G
Sbjct: 608 KLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDG 666



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 129/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +   +  +   P++  + +LIDG    G +D A  L+  M  +  + NVV Y +
Sbjct: 463 LDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTS 522

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI  + K    E+   +Y EM+ +G  P ++  N+    +F+  +VE    LF+E++   
Sbjct: 523 LIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQG 582

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  +Y+  I GL K G+  E  +LF  ++     L + AY+ +IDG CK GK++ A+
Sbjct: 583 LVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAY 642

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +L + +   GL P VVTY  ++ G     ++D+A+ LF + ++ GV  N V +++L+ G
Sbjct: 643 QLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 128/238 (53%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           ++  ++   M+ RG  P+  + ++ +D     GE+++ R LF  +   G + +V +Y+ L
Sbjct: 534 EDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSIL 593

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+G  K     E+  L+ EM  +G+   V+ YNT+  G  +  +V+ A +L +EM+   +
Sbjct: 594 IHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGL 653

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
                TY + +DGL K   + EA  LF   + +  +L +  YS LIDG  K+G+++ A+ 
Sbjct: 654 QPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYL 713

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + + L + GL PN  T+N ++       ++D+A   F +M+    +PN +T++ ++ G
Sbjct: 714 ILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMING 771



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 133/259 (51%), Gaps = 1/259 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA R+ D M Q    PN   Y+ LID  C  GE++ A ++  +M   G   N++T N 
Sbjct: 394 VEEALRIHDEMRQDAA-PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNI 452

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+  CK + ++E+ +++  +  K   P   T+ +L  GL    +V+ A  L+++M  SD
Sbjct: 453 MIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSD 512

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
                  Y + I    K G   +  ++++ +    C   +   +  +D + K G++E   
Sbjct: 513 QIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGR 572

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF+ +   GL+P+V +Y+I+IHG    G   + + LF +M+ +G+  + + +NT++ G 
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGF 632

Query: 241 IRNNETSKVVELLHRMDER 259
            ++ +  K  +LL  M  +
Sbjct: 633 CKSGKVDKAYQLLEEMKTK 651



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 15/258 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +LL+ M  +G++P    Y +++DG      +D A  LF      G   NVV Y++
Sbjct: 638 VDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSS 697

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+ K   ++E+  +  E++ KG+ P   T+N L   L +  +++ A   F  M++  
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK 757

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TY+  I+GLC      +A   ++ ++    +     Y+ +I GL K G +  A 
Sbjct: 758 CSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEAR 817

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            LF      G +P+   YN MI G  +    +KA D ++  E            T + GC
Sbjct: 818 GLFDRFKASGGVPDSACYNAMIEGLSS---ANKAMDAYIVFE-----------ETRLKGC 863

Query: 241 IRNNETSKV-VELLHRMD 257
             N++T  V ++ LH+ D
Sbjct: 864 RVNSKTCVVLLDALHKAD 881



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 1/258 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  ++++M +   RP    Y+TLI         D    LF  M   G   NV  + T
Sbjct: 184 LKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTT 243

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+  + +   ++ +L+L  EM S      +V YN       ++ +V+ A K F EM+   
Sbjct: 244 LVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQG 303

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TY T I  LCK   + EA ELF  L + +    + AY+ +I G    GK + A+
Sbjct: 304 LVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAY 363

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L +   R G +P+V+ YN ++      G++++A  +  +M  +  APN  T+N L+   
Sbjct: 364 SLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDML 422

Query: 241 IRNNETSKVVELLHRMDE 258
            +  E    +++   M E
Sbjct: 423 CKAGELEAALKVQDTMKE 440



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 94/179 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA  +L+ ++Q+G+ PN++ ++ L+D      EID A+  F +M    C  N +TY+ 
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSI 767

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C  +   ++   + EM  +G++P  +TY T+  GL +   V  A  LFD  + S 
Sbjct: 768 MINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASG 827

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
              +++ YN  I+GL      ++A  +F   R+  C +  +    L+D L K   LE A
Sbjct: 828 GVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 2/239 (0%)

Query: 22  VYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
           VY+  +     T  +D   ++   M + G  + N V+   L+  + K+  ++E+  +   
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVE-LVASFVKSHKLKEAFGVIEM 193

Query: 81  MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
           M     RP    Y TL   L   ++ +  L LF +MQ     A    + T +    + G 
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253

Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
           I  A  L   ++       +  Y+  ID   K+GK++ AW+ F  +   GL+P+ VTY  
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           +I   C   ++D+A +LF +++     P    +NT+++G     +  +   LL R   +
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRK 372



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 67/152 (44%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DEA      M      PNA  YS +I+G C+  + ++A   +  M   G   N +TY T
Sbjct: 743 IDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTT 802

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G  K  +V E+  L+    + G  P    YN +  GL   ++   A  +F+E +   
Sbjct: 803 MIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKG 862

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
               + T    +D L K   + +AA +   LR
Sbjct: 863 CRVNSKTCVVLLDALHKADCLEQAAIVGAVLR 894


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 139/258 (53%), Gaps = 4/258 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L+D M++RG++ + F  +T++   C     + A+ L  S    G M + V+Y T++
Sbjct: 433 KAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVM 492

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
             Y K  + E +L L+ EM+ K + P++ TYNTL  GL  + +++ A+   +E+    + 
Sbjct: 493 AAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLV 552

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAW 180
            + +TYN  I   CK G +  A +     ++++     +  +C  L++GLC  GKL+ A 
Sbjct: 553 PDDTTYNIIIHAYCKEGDLENAFQFHN--KMVENSFKPDVVTCNTLMNGLCLNGKLDKAL 610

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+S    G   +V+TYN +I   C DG +D A   F DMEA+G+ P+  T+N ++   
Sbjct: 611 KLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 670

Query: 241 IRNNETSKVVELLHRMDE 258
                T +   +LH++ E
Sbjct: 671 SEAGRTEEAQNMLHKLAE 688



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A   L  M   G+ P+A  Y+TL++  C  G +  AR L   M  +G      TYNT
Sbjct: 220 LADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNT 279

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH-S 119
           L++ Y +   ++++  +   M + G  P + TYN L  GL +  +V+ A +L DEM+   
Sbjct: 280 LVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLG 339

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +  +  TYNT  D   K     +A  L   +R    +  +  ++ +I GLCK G+LE A
Sbjct: 340 TLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGA 399

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
                 +   GL P+V+TYN +IH  C  G + KA+ L  +M  +G+  +  T NT++  
Sbjct: 400 LGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYN 459

Query: 240 CIRNNETSKVVELLHRMDER 259
             +     +   LL    +R
Sbjct: 460 LCKEKRYEEAQGLLQSPPQR 479



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 1/260 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM-HNVVTYN 59
           + +A+++++ M   G  P+ + Y+ L  G C  G++D A  L   M+  G +  +VVTYN
Sbjct: 290 IKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYN 349

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           TL +   K +   ++L L  EM  KG++ T+VT+N +  GL +  ++E AL   ++M   
Sbjct: 350 TLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADD 409

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +A +  TYNT I   CK G I +A  L   +     +L     + ++  LCK  + E A
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             L QS P+ G MP+ V+Y  ++  +  +   + A  L+ +M  K + P+  T+NTL+ G
Sbjct: 470 QGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKG 529

Query: 240 CIRNNETSKVVELLHRMDER 259
             R     + ++ L+ + E+
Sbjct: 530 LSRMGRLKEAIDKLNELMEK 549



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 1/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  LL  M + GV P    Y+TL+  +   G I +A ++  +M  NG   ++ TYN 
Sbjct: 255 LGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNV 314

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           L  G C+   V+E+  L  EM   G + P VVTYNTL    F+      AL+L +EM+  
Sbjct: 315 LAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREK 374

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V A   T+N  I GLCK+G +  A      +        +  Y+ LI   CK G +  A
Sbjct: 375 GVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKA 434

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L   + R GL  +  T N +++  C + + ++A  L      +G  P+ V++ T+M  
Sbjct: 435 YTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAA 494

Query: 240 CIRNNETSKVVELLHRMDERN 260
             +   +   + L   M E+ 
Sbjct: 495 YFKEYNSEPALRLWDEMIEKK 515



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 1/245 (0%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           + PN + ++ L+   C  G +  A     +M   G   + VTYNTL+N +C+   + E+ 
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L + M   G+ PT  TYNTL      +  ++ A K+ + M  +    +  TYN    GL
Sbjct: 260 ALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGL 319

Query: 136 CKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
           C+ G + EA  L   +  L   L  +  Y+ L D   K      A  L + +   G+   
Sbjct: 320 CQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKAT 379

Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
           +VT+NI+I G C DG+++ A      M   G+AP+ +T+NTL+    +    +K   L+ 
Sbjct: 380 LVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMD 439

Query: 255 RMDER 259
            M  R
Sbjct: 440 EMVRR 444



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 35/279 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           + A RL D MI++ + P+   Y+TLI G    G +  A +    +   G + +  TYN +
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ YCK  D+E +   +++M+    +P VVT NTL +GL    +++ ALKLF+       
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYNT I  +CK+G +  A   F  +     +     Y+ ++  L + G+ E A  
Sbjct: 622 KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQN 681

Query: 182 LFQSLPRVG----------LMPNVV-------------------------TYNIMIHGFC 206
           +   L   G          L P+ V                          Y  +++G C
Sbjct: 682 MLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLC 741

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
             GQ  +A  +  +M  KG++ +  T+ TLM G ++  +
Sbjct: 742 TSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 3/204 (1%)

Query: 59  NTLINGYCKTKDV--EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
           N +++   ++     + SL+ +  +++  + P   T+N L H       +  AL     M
Sbjct: 171 NAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTM 230

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
           Q   ++ +  TYNT ++  C+ G + EA  L   ++          Y+ L+    ++G +
Sbjct: 231 QGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWI 290

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNT 235
           + A ++ +++   G  P++ TYN++  G C  G++D+A  L  +ME  G + P+ VT+NT
Sbjct: 291 KQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNT 350

Query: 236 LMLGCIRNNETSKVVELLHRMDER 259
           L   C +   +S  + LL  M E+
Sbjct: 351 LADACFKCRCSSDALRLLEEMREK 374



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 35/172 (20%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +L +  +++G + +   Y+TLI   C  G++D A   F  M+  G   +  TYN 
Sbjct: 606 LDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNV 665

Query: 61  LINGYCKTKDVEESLNLYSEMLSKG----------IRPTVV------------------- 91
           +++   +    EE+ N+  ++   G          ++P+ V                   
Sbjct: 666 VLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENP 725

Query: 92  ------TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
                  Y  L +GL    Q + A  + DEM    ++ ++STY T ++GL K
Sbjct: 726 QDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 3/118 (2%)

Query: 144 AAELFRTLRV-LKCELGIEAYSCLIDGLCKIGKL--ETAWELFQSLPRVGLMPNVVTYNI 200
           AA+L  +LR  ++    ++A + ++  L +      + + + F+S+  + L PN  T+N+
Sbjct: 150 AAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNL 209

Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           ++H  C+ G +  A      M+  G++P+ VT+NTL+    R     +   LL RM +
Sbjct: 210 LVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKK 267


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 121/255 (47%), Gaps = 35/255 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  L D M QRG+ P+AF Y  +I G C +  +D A  LF  M  +G   + VT N L+
Sbjct: 214 DALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALL 273

Query: 63  NGYCKTKDVEESLNL-----------------------------------YSEMLSKGIR 87
           NG+C    V+E+ +L                                   Y +M+   ++
Sbjct: 274 NGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVK 333

Query: 88  PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
           P V  Y  +  GL E  +V  AL+L +EM  S V  +T  YN  I G C  G + EA  L
Sbjct: 334 PDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSL 393

Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
              +    C   ++ YS LI G+C+ G    A E+F  + ++G  P+ VT+N +I G C 
Sbjct: 394 QLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCK 453

Query: 208 DGQMDKAHDLFLDME 222
            GQ++KAH LF  ME
Sbjct: 454 TGQLEKAHLLFYKME 468



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 132/261 (50%), Gaps = 13/261 (4%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MI+  V+P+ ++Y+ ++ G    G++  A EL   M  +G + + V YN LI G+C    
Sbjct: 327 MIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGL 386

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           + E+ +L  E+      P V TY+ L  G+        A ++F+EM+         T+N+
Sbjct: 387 LSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNS 446

Query: 131 FIDGLCKNGYIVEAAELFRTLRV-------LKCELGIE------AYSCLIDGLCKIGKLE 177
            IDGLCK G + +A  LF  + +       L+   G        +   +++ LC  G + 
Sbjct: 447 LIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIH 506

Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
            A+ +   L   G  P + TYNI+++GFC  G  + A+ LF +M+ KG++P+ VT+ TL+
Sbjct: 507 KAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLI 566

Query: 238 LGCIRNNETSKVVELLHRMDE 258
            G +R        ++  +M++
Sbjct: 567 NGLLRFQREEDAYKVFDQMEK 587



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 124/248 (50%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           M++    PN   +S LIDG C +G +  A  LF  M   G + +  TY  +I+G C++K 
Sbjct: 187 MMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKR 246

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
           V+++  L+ +M   G+ P  VT N L +G   + +V+ A  L    +      +   Y+ 
Sbjct: 247 VDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSC 306

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
            I GL +     +   L+R +     +  +  Y+ ++ GL + GK+  A EL   +   G
Sbjct: 307 LIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESG 366

Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
           ++P+ V YN++I GFC+ G + +A  L L++      PN  T++ L+ G  RN  T    
Sbjct: 367 VVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQ 426

Query: 251 ELLHRMDE 258
           E+ + M++
Sbjct: 427 EIFNEMEK 434



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 127/292 (43%), Gaps = 62/292 (21%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-------------- 48
           +A  + + M + G  P+A  +++LIDG C TG++++A  LF  M+I              
Sbjct: 424 DAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGP 483

Query: 49  ------------------NGCMHN----------------VVTYNTLINGYCKTKDVEES 74
                             +G +H                 + TYN L+NG+CK  +   +
Sbjct: 484 SHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGA 543

Query: 75  LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
             L+ EM  KG+ P  VTY TL +GL    + E A K+FD+M+ +    + + Y T +  
Sbjct: 544 YKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTW 603

Query: 135 LCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETA----WELFQSLPRV 189
           +C+   +  A  L+ + LR ++ +   EA    I+G  +  ++E A     E+   L   
Sbjct: 604 MCRRMELPRAFSLWLKYLRNIRSQED-EAIKA-IEGYFEKQEVEKAVRGLLEMDFKLNDF 661

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV---APNCVTFNTLML 238
            L P    Y I + G C   ++ +A  +FL +E   V    P CV     +L
Sbjct: 662 DLGP----YAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLL 709



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 94/204 (46%)

Query: 57  TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
            +  LI  Y K    ++++  +  M      P V TYN +   L + + +  AL ++  M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
              +     +T++  IDGLCK+G + +A  LF  +           Y  +I GLC+  ++
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247

Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
           + A+ LF  +   G+ P+ VT N +++GFC   ++D+A  L    E  G   +   ++ L
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307

Query: 237 MLGCIRNNETSKVVELLHRMDERN 260
           + G  R      V  L  +M E N
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDN 331



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 35/260 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A R+L  +   G  P  + Y+ L++GFC  G  + A +LF  M   G   + VTY TLI
Sbjct: 507 KAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLI 566

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
           NG  + +  E++  ++ +M   G  P    Y T+                          
Sbjct: 567 NGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRS 626

Query: 97  --------FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                     G FE  +VE A++   EM       +   Y  ++ GLC+   + EA ++F
Sbjct: 627 QEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIF 686

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF-QSLPRVGLMPNVVTYNIMIHGFCN 207
             L   K  +       LI  L K G L+ A ++F  ++ +  L+   V   I+      
Sbjct: 687 LILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVRR 746

Query: 208 DGQMDKAHDLFLDMEAKGVA 227
            G+M K   ++L    K V 
Sbjct: 747 KGEMGKDRAIYLLCRMKSVG 766



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 9/151 (5%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN-- 59
           ++A ++ D M + G  P+A VY T++   C   E+ RA  L++       + N+ +    
Sbjct: 576 EDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKY-----LRNIRSQEDE 630

Query: 60  --TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
               I GY + ++VE+++    EM  K     +  Y     GL +  +V  ALK+F  ++
Sbjct: 631 AIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILE 690

Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
              V          I  L K G +  A ++F
Sbjct: 691 EYKVVITPPCCVKLIYFLLKEGDLDRAIDVF 721


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 127/239 (53%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L   M    +  N   YS LID FC  G +D A   F  M  +G    +  YN+
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNS 433

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+CK  D+  +  LY++M+++G+ PT  T+ TL  G  +  QVE A KL+ EM   +
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +A    T+   I GLC    + EA++LF  +   K +     Y+ +I+G CK   ++ A+
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           EL + +   GL+P+  TY  +I G C+ G++  A D   D+  K +  N + ++ L+ G
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHG 612



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 134/260 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  L+  + + G  PN FVY+ LI+  C   ++D+A  L+ +M       N VTY+ 
Sbjct: 339 IDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSI 398

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+ +CK   ++ + + +  M+  GIR T+  YN+L +G  +   +  A  L+ +M +  
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +    +T+ T I G CK+  + +A +L+R +   +    +  ++ LI GLC   ++  A 
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF  +    + P  VTYN+MI G+C    MDKA +L  DM   G+ P+  T+  L+ G 
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578

Query: 241 IRNNETSKVVELLHRMDERN 260
                 S   + +  + ++N
Sbjct: 579 CSTGRVSAAKDFIDDLHKKN 598



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 130/250 (52%), Gaps = 3/250 (1%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
           MIQRG+  +   ++ LIDG     ++ R   L   M   G   + V Y ++I+ Y K   
Sbjct: 629 MIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGS 688

Query: 71  VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
            ++S      M+++   P VVTY    +GL ++ +++ A  LF++M  ++++  + TY  
Sbjct: 689 FKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGC 748

Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-YSCLIDGLCKIGKLETAWELFQSLPRV 189
           F+D L K G + EA +L   +  LK  L   A Y+ LI G CK+G+L  A ++   +   
Sbjct: 749 FLDSLTKEGNMKEATDLHHEM--LKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTEN 806

Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
           G+ P+ +TY+ +I+  C  G +  A +L+  M  KGV P+ V FN L+ GC  N    K 
Sbjct: 807 GIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKA 866

Query: 250 VELLHRMDER 259
            EL + M  R
Sbjct: 867 FELRNDMLSR 876



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 34/290 (11%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           MD+A  LL+ M+  G+ P+ + Y  LI G C TG +  A++    +       N + Y+ 
Sbjct: 549 MDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSA 608

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++GYC    + E+L+   EM+ +GI   +V +  L  G  +   ++    L  +M    
Sbjct: 609 LLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQG 668

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  ++  Y + ID   K G   ++ E    +   KC   +  Y+  ++GLCK+G+++ A 
Sbjct: 669 LRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAG 728

Query: 181 ELFQSLPRV----------------------------------GLMPNVVTYNIMIHGFC 206
            LF+ +                                     GL+ N  TYNI+I GFC
Sbjct: 729 HLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFC 788

Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
             G++ +A  +  +M   G+ P+C+T++T++    R+ +    VEL   M
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTM 838



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 120/237 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +  A  L   MI  G+ P A  ++TLI G+C   ++++A +L+  M+      +V T+  
Sbjct: 444 LSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTA 503

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G C T ++ E+  L+ EM+ + I+PT VTYN +  G  + H ++ A +L ++M H+ 
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG 563

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +T TY   I GLC  G +  A +    L     +L    YS L+ G C  G+L  A 
Sbjct: 564 LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
                + + G+  ++V + ++I G      M +   L   M  +G+ P+ V + +++
Sbjct: 624 SASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMI 680



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 35/288 (12%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
           + D  +  GV+P+ +  S +I   C   +  RA+E  + M+ N    ++VTYN LI+G C
Sbjct: 205 VFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLC 264

Query: 67  KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAET 125
           K   V E+L +   +  KG++  VVTY TL  G   + Q +  + L +EM +   V  E 
Sbjct: 265 KGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEA 324

Query: 126 S----------------------------------TYNTFIDGLCKNGYIVEAAELFRTL 151
           +                                   YN  I+ LCK   + +A  L++ +
Sbjct: 325 AVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNM 384

Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
             +   L    YS LID  CK G L+ A   F  +   G+   +  YN +I+G C  G +
Sbjct: 385 HSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDL 444

Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
             A  L+  M  +G+ P   TF TL+ G  ++ +  K  +L   M+E+
Sbjct: 445 SAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEK 492



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 123/256 (48%), Gaps = 13/256 (5%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LDLM+     PN   Y+  ++G C  GEIDRA  LF  M       N VTY   ++   K
Sbjct: 696 LDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
             +++E+ +L+ EML KG+     TYN L  G  ++ ++  A K+  EM  + +  +  T
Sbjct: 756 EGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCIT 814

Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
           Y+T I   C++G +  A EL+ T+     E    A++ LI G C  G L+ A+EL   + 
Sbjct: 815 YSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDML 874

Query: 188 RVGLMPNVVTY---------NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
             GL P  +           N ++HG C  G++D A  L+  M  + V  +   +  L L
Sbjct: 875 SRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLYL 934

Query: 239 ---GCIRNNETSKVVE 251
              G I  +E  +V E
Sbjct: 935 LSYGVISKSEELEVNE 950



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 108/235 (45%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  +L LM+   + P     S +++G     +     E+F      G   +  T + +I
Sbjct: 166 DAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVI 225

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
              C+ KD   +      M S     ++VTYN L HGL +   V  AL++   ++   + 
Sbjct: 226 RSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLK 285

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +  TY T + G C+     +   L   +  L       A S L+DGL K G +++A++L
Sbjct: 286 EDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDL 345

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
              L R G +PN+  YN +I+  C    +DKA  L+ +M +  +  N VT++ L+
Sbjct: 346 VVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILI 400



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 94/203 (46%)

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           + + ++ L++ Y +   V +++ +   ML   + P V T + + +GL  I +     ++F
Sbjct: 147 STLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVF 206

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           DE  ++ V  +  T +  I  LC+      A E    +   + +L I  Y+ LI GLCK 
Sbjct: 207 DESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKG 266

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G +  A E+ +SL   GL  +VVTY  ++ GFC   Q D    L  +M   G  P     
Sbjct: 267 GGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAV 326

Query: 234 NTLMLGCIRNNETSKVVELLHRM 256
           + L+ G  +        +L+ ++
Sbjct: 327 SGLVDGLRKKGNIDSAYDLVVKL 349



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 9/123 (7%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+++L  M + G+ P+   YST+I   C +G++  A EL+ +M   G   + V +N LI
Sbjct: 795 EATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLI 854

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTY---------NTLFHGLFEIHQVEHALKLF 113
            G C    ++++  L ++MLS+G++P  +           N L HG     +V+ AL+L+
Sbjct: 855 YGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLY 914

Query: 114 DEM 116
             M
Sbjct: 915 HSM 917


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 130/244 (53%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PN+  +S +I+G   TG++D A  LF  M   GC  +++ YN LI+G C +  ++ES 
Sbjct: 320 VPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESC 379

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
            L  EM   GI PT  T N +F  L   H +  AL L  +M+            + +  L
Sbjct: 380 GLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKEL 439

Query: 136 CKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNV 195
           CK+G  VEA +    +     +  I AYS  +DGL KI +++ A +LFQ +   G  P+V
Sbjct: 440 CKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDV 499

Query: 196 VTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHR 255
           + YNI+I G C   ++ +A +L  +ME KG+ P+ VT+NTL+ G  + +   + +  L  
Sbjct: 500 IAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSM 559

Query: 256 MDER 259
           M E+
Sbjct: 560 MIEK 563



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 24/275 (8%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  L++ M ++ VR N   + +LI GF     +D+A  LF  M  +G   ++  Y+ 
Sbjct: 151 VDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDV 210

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I G C  KDV+++L LYSEM    I+P V     L     +    E  L  F E  H D
Sbjct: 211 IIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSK----EEELTCFFEEMHED 266

Query: 121 VAAETST--YNTFIDGLCKNGYIVEAAELFRTLRVLKC----ELG------------IEA 162
           +  + ST  YN+ ++ L  NG + +A  L + + +  C    E+G               
Sbjct: 267 MDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTT 326

Query: 163 YSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDME 222
           +S +I+GL K G L+ A  LF+ + R+G  P+++ YN +I G C   ++ ++  L  +ME
Sbjct: 327 FSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEME 386

Query: 223 AKGVAPNCVTFNTLMLGCI-RNNETSKVVELLHRM 256
             G+ P   T N  + GC+ R ++ S  + LL +M
Sbjct: 387 ESGIEPTSFT-NNCIFGCLCRRHDISGALHLLKKM 420



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 119/259 (45%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E+  LL  M + G+ P +F  + +    C   +I  A  L   M I+G +  +    +
Sbjct: 375 LQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTS 434

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK     E+     +M  +G +P +V Y+    GL +I +V+ ALKLF ++    
Sbjct: 435 LVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQG 494

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   YN  I GLCK   I EA  L   +           Y+ LIDGLCK   LE A 
Sbjct: 495 YCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAM 554

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
                +      PNV+TY+ +I+G CN G+ D A  L+ +M  KG  P+ + +   + G 
Sbjct: 555 LFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGL 614

Query: 241 IRNNETSKVVELLHRMDER 259
                 ++ +  L  M+ER
Sbjct: 615 SNCGRPNEALVYLREMEER 633



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 2/257 (0%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A  LL  M   G  P     ++L+   C  G+   A +  V M   G   ++V Y+  ++
Sbjct: 413 ALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLD 472

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G  K ++V+++L L+ ++ ++G  P V+ YN L  GL +  ++  A  L  EM+   +  
Sbjct: 473 GLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVP 532

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWEL 182
              TYNT IDGLCK  ++ E A LF ++ + K  E  +  YS LI+GLC  G+ + A  L
Sbjct: 533 SAVTYNTLIDGLCKTDHL-EEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVL 591

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
           +  + R G  P+ + Y   IHG  N G+ ++A     +ME + + P+   +  L+   + 
Sbjct: 592 WNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLV 651

Query: 243 NNETSKVVELLHRMDER 259
           ++      E+L  M ++
Sbjct: 652 DSNQPLAFEILQEMVDK 668



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 108/227 (47%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA + L  M + G +P+   YS  +DG     E+D+A +LF  +   G   +V+ YN LI
Sbjct: 447 EACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILI 506

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
            G CKT+ + E+ NL  EM  KG+ P+ VTYNTL  GL +   +E A+     M   +  
Sbjct: 507 KGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKERE 566

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               TY+T I+GLC  G   +A  L+  +    C     AY   I GL   G+   A   
Sbjct: 567 PNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVY 626

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
            + +    + P+   Y  +++ F  D     A ++  +M  KG  P+
Sbjct: 627 LREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPD 673



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 8/234 (3%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A +L   +  +G  P+   Y+ LI G C T  I  A+ L   M+  G + + VTYNT
Sbjct: 480 VDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNT 539

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G CKT  +EE++   S M+ K   P V+TY+TL +GL    + + AL L++EM    
Sbjct: 540 LIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKG 599

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
               +  Y  FI GL   G   EA    R +   + +     Y  L++          A+
Sbjct: 600 CTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAF 659

Query: 181 ELFQSLPRVGLMP-----NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           E+ Q +   G  P     N ++    I  F  D +   +     ++ AKG  P+
Sbjct: 660 EILQEMVDKGKFPDLHDKNHISVRNAILKFSEDARTSSS---IKNLLAKGSIPS 710



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 139 GYIVEAAELFRTLRVLK-CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
           G +VEA  LF  ++ +  C     +Y+CL++ L K   ++      + +   G   +  T
Sbjct: 44  GLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYT 103

Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
              ++  +CN  + DKA D+F ++  +G     V F+ L+L   +  +  K  EL+  M+
Sbjct: 104 LTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKACELIETME 162

Query: 258 ERN 260
           E+N
Sbjct: 163 EKN 165


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 136/258 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A    + + + G+ P+  +Y+ LI G+C  G I  A  L   M   GC  +VVTYNT
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +++G CK K + E+  L++EM  + + P   T   L  G  ++  +++A++LF +M+   
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +  TYNT +DG  K G I  A E++  +   +      +YS L++ LC  G L  A+
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            ++  +    + P V+  N MI G+C  G           M ++G  P+C+++NTL+ G 
Sbjct: 571 RVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630

Query: 241 IRNNETSKVVELLHRMDE 258
           +R    SK   L+ +M+E
Sbjct: 631 VREENMSKAFGLVKKMEE 648



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 130/247 (52%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           + GV  N +  + +++  C  G++++       +   G   ++VTYNTLI+ Y     +E
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287

Query: 73  ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
           E+  L + M  KG  P V TYNT+ +GL +  + E A ++F EM  S ++ +++TY + +
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347

Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
              CK G +VE  ++F  +R       +  +S ++    + G L+ A   F S+   GL+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407

Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
           P+ V Y I+I G+C  G +  A +L  +M  +G A + VT+NT++ G  +     +  +L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467

Query: 253 LHRMDER 259
            + M ER
Sbjct: 468 FNEMTER 474



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 125/239 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M+EA  L++ M  +G  P  + Y+T+I+G C  G+ +RA+E+F  M  +G   +  TY +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+   CK  DV E+  ++S+M S+ + P +V ++++         ++ AL  F+ ++ + 
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +  +   Y   I G C+ G I  A  L   +    C + +  Y+ ++ GLCK   L  A 
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +LF  +    L P+  T  I+I G C  G +  A +LF  M+ K +  + VT+NTL+ G
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 135/261 (51%), Gaps = 2/261 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA +L + M +R + P+++  + LIDG C  G +  A ELF  M       +VVTYNT
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+ K  D++ +  ++++M+SK I PT ++Y+ L + L     +  A +++DEM   +
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +       N+ I G C++G   +       +          +Y+ LI G  +   +  A+
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640

Query: 181 ELFQSLP--RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
            L + +   + GL+P+V TYN ++HGFC   QM +A  +   M  +GV P+  T+  ++ 
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700

Query: 239 GCIRNNETSKVVELLHRMDER 259
           G +  +  ++   +   M +R
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQR 721



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 125/259 (48%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++    L  + ++GV P+   Y+TLI  +   G ++ A EL  +M   G    V TYNT
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK    E +  +++EML  G+ P   TY +L     +   V    K+F +M+  D
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           V  +   +++ +    ++G + +A   F +++          Y+ LI G C+ G +  A 
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L   + + G   +VVTYN ++HG C    + +A  LF +M  + + P+  T   L+ G 
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490

Query: 241 IRNNETSKVVELLHRMDER 259
            +       +EL  +M E+
Sbjct: 491 CKLGNLQNAMELFQKMKEK 509



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 2/222 (0%)

Query: 41  ELFVSMD--INGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
           E+  S+D   + C  N   ++ LI  Y + + + E+   ++ + SKG   ++   N L  
Sbjct: 149 EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208

Query: 99  GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL 158
            L  I  VE A  ++ E+  S V     T N  ++ LCK+G + +       ++      
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268

Query: 159 GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLF 218
            I  Y+ LI      G +E A+EL  ++P  G  P V TYN +I+G C  G+ ++A ++F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328

Query: 219 LDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
            +M   G++P+  T+ +L++   +  +  +  ++   M  R+
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 109/240 (45%)

Query: 19  NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
           N  V+  LI  +    ++  A E F  +   G   ++   N LI    +   VE +  +Y
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 79  SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
            E+   G+   V T N + + L +  ++E       ++Q   V  +  TYNT I      
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283

Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
           G + EA EL   +       G+  Y+ +I+GLCK GK E A E+F  + R GL P+  TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
             ++   C  G + +   +F DM ++ V P+ V F+++M    R+    K +   + + E
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 40/76 (52%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
           Q G+ P+ F Y++++ GFC   ++  A  +   M   G   +  TY  +ING+    ++ 
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709

Query: 73  ESLNLYSEMLSKGIRP 88
           E+  ++ EML +G  P
Sbjct: 710 EAFRIHDEMLQRGFSP 725


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 130/246 (52%), Gaps = 13/246 (5%)

Query: 15  GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDING-CMHNVVTYNTLINGYCKTKDVEE 73
           G+ P+ + Y+TLI G+C  G ++ A ++F  M   G    + V YN LI GYC    ++ 
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDV 237

Query: 74  SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
           +L    +M+ +G+  TV TYN L H LF   +   A  + +EMQ + ++ +  TYN  I+
Sbjct: 238 ALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILIN 297

Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
           G CK G   +A E+F  +           Y+ LI    + G+++    LF+   + G+ P
Sbjct: 298 GYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRP 357

Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRNNETSKVVEL 252
           +VV YN +I+  C  G M++A ++  +ME K + P+ VT+NTL+ G C           L
Sbjct: 358 DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFC-----------L 406

Query: 253 LHRMDE 258
           L R+DE
Sbjct: 407 LGRLDE 412



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 134/257 (52%), Gaps = 3/257 (1%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTLING 64
           R L+L+ Q   RPNA  Y+T+I GFC  G +  A E+   M +  G   +  TY TLI+G
Sbjct: 134 RALELLRQMP-RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISG 192

Query: 65  YCKTKDVEESLNLYSEMLSKG-IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           +CK   +E++  ++ EML++G + P+ V YN L  G  +  +++ AL+  ++M    VA 
Sbjct: 193 WCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAM 252

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
             +TYN  +  L  +G   +A  +   ++       +  Y+ LI+G CK G  + A E+F
Sbjct: 253 TVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVF 312

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           + + R G+    VTY  +I+ F   GQ+ +   LF     KG+ P+ V +N L+      
Sbjct: 313 EEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAG 372

Query: 244 NETSKVVELLHRMDERN 260
            +  +  E++  M+++ 
Sbjct: 373 GDMERAFEIMAEMEKKR 389



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 9/257 (3%)

Query: 1   MDEASRLLDLMIQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           M++A+++ D M+ +G V P+A +Y+ LI G+C  G++D A +    M   G    V TYN
Sbjct: 199 MEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYN 258

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            L++         ++  +  EM   G+ P V TYN L +G  +    + AL++F+EM   
Sbjct: 259 LLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRK 318

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V A   TY + I    + G + E   LF+          +  Y+ LI+  C  G +E A
Sbjct: 319 GVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERA 378

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           +E+   + +  + P+ VTYN +I GFC  G++D+A  L  +M  +G+ P+        LG
Sbjct: 379 FEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD--------LG 430

Query: 240 CIRNNETSKVVELLHRM 256
             +N +      L+  M
Sbjct: 431 LCKNGQGDDAENLMKEM 447



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + E  RL  + +++G+RP+  +Y+ LI+  C  G+++RA E+   M+      + VTYNT
Sbjct: 340 VQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNT 399

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI G+C    ++E+  L  EM  +GI+P +        GL +  Q + A  L  EM    
Sbjct: 400 LIRGFCLLGRLDEARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKG 451

Query: 121 VAAETSTYNTFIDGL 135
           +  + STY + I+GL
Sbjct: 452 ITPDDSTYISLIEGL 466



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 10/181 (5%)

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+      +    SL  Y+++ S  +   V +     H L        A  LF ++    
Sbjct: 56  LLTASAAARPHATSLRFYAQLKSLSVPIPVAS----LHPLLSSLPSAPAFALFADIYRLR 111

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +   T+T+N  +  LC  G  V A EL R +           Y+ +I G C  G+++ A 
Sbjct: 112 LPLCTTTFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAAL 167

Query: 181 ELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG-VAPNCVTFNTLML 238
           E+ + +  R G+ P+  TY  +I G+C  G+M+ A  +F +M  +G VAP+ V +N L+ 
Sbjct: 168 EVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIG 227

Query: 239 G 239
           G
Sbjct: 228 G 228


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 127/240 (52%), Gaps = 1/240 (0%)

Query: 1   MDEASRLLDLMI-QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA R+ + M  +   RPN+  YS LI G C  G ++ A +L   M   GC  +  TY 
Sbjct: 179 LGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 238

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI   C     ++++ +  EM +K   P V TY  L   L    ++E A  +F +M   
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     T+N  I+G CK G++V A +L   +    C+  I  Y+ L++GLC++ K   A
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L + +   GL+P+ VTYNI++ GFC +GQ++ A ++F  M + G+ P+  TF  L+ G
Sbjct: 359 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 418



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 136/292 (46%), Gaps = 35/292 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++LD M  +   PN   Y+ LID  C  G+I+ A  +F  M  +G    ++T+N L
Sbjct: 251 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 310

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           INGYCK   V  +  L S M     +P + TYN L  GL  + +   A  L   +  + +
Sbjct: 311 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 370

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  +DG CK G +  A  +F ++     E     ++ LIDGLCK+G+LE A  
Sbjct: 371 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 430

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQ----------------MDKAH--DLFLDMEA 223
           +  S+ + G+  + VT+  +I G C  G+                +  AH  + FLD   
Sbjct: 431 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 490

Query: 224 K-----------------GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           K                 G+ P+ VT   L+ G  R  ET+  +++L RM +
Sbjct: 491 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 542



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 132/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  ++  G+ P+   Y+ L+DGFC  G+++ A  +F SM+  G   +  T+  LI
Sbjct: 357 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 416

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +E++  +   M+ KGI    VT+  L  G  +I + +    LF+ M  +   
Sbjct: 417 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 476

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N F+D L K+  + EA  +   +        +  ++ LI+G C+ G+   + ++
Sbjct: 477 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 536

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + G  PNV TY I+I+G CN+G++++A  +   M + GV+PN  T+  L+   ++
Sbjct: 537 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 596

Query: 243 NNETSKVVELLHRM 256
                +  +++  M
Sbjct: 597 AGRLDRAFQIVSTM 610



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 125/254 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL +M +   +PN   Y+ L++G C   +  +A  L   +  NG + + VTYN L++
Sbjct: 323 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 382

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK   +  + N+++ M S G+ P   T+  L  GL ++ ++E A  +   M    ++ 
Sbjct: 383 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 442

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+   IDG CK G   +   LF  +   +C      ++C +D L K  KL  A  + 
Sbjct: 443 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 502

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + GL+P+VVT+ I+I G C  G+   +  +   M+  G +PN  T+  ++ G   N
Sbjct: 503 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 562

Query: 244 NETSKVVELLHRMD 257
               +   +L  M 
Sbjct: 563 GRVEEAETILFSMS 576



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 7/250 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTYNTLINGYCK 67
           M+  G       Y T+++  C  G + +A E+F    +    G   +V T   L N  C+
Sbjct: 119 MVNEGFVLGGIDYRTVVNALCKNGFV-QAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CR 175

Query: 68  TKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             D+ E+  ++ +M  +   RP  VTY+ L HGL E  ++E A +L  EM        T 
Sbjct: 176 RDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 235

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   I   C  G   +A ++   +    C   +  Y+ LID LC+ GK+E A  +F+ +
Sbjct: 236 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 295

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL P ++T+N +I+G+C +G +  A  L   ME     PN  T+N LM G  R +++
Sbjct: 296 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 355

Query: 247 SKVVELLHRM 256
            K   LL R+
Sbjct: 356 YKAFLLLRRV 365



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 117/244 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  + + M   G+ P+ F ++ LIDG C  G +++A  +  SM   G   + VT+  
Sbjct: 390 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 449

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK    ++   L+  M+      T  T+N     L + +++  A  +  +M    
Sbjct: 450 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 509

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   I+G C+ G    + ++   ++   C   +  Y+ +I+GLC  G++E A 
Sbjct: 510 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 569

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +  S+   G+ PN  TY +++      G++D+A  +   M   G  PN   ++ L+ G 
Sbjct: 570 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629

Query: 241 IRNN 244
           + +N
Sbjct: 630 VLSN 633



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 39/253 (15%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++L+ M Q G  PN + Y+ +I+G C  G ++ A  +  SM   G   N  TY  L+  +
Sbjct: 535 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 594

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG-------------------------- 99
            K   ++ +  + S M+  G +P    Y+ L  G                          
Sbjct: 595 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 654

Query: 100 -----------LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                      +F +  V+HALK+ DE++   V  E   YN  + GLCK G I+EA +L 
Sbjct: 655 EENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLT 713

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           + + V       +A S +I+  CK  K +   E  + +     +P+  +Y  +IHG  N+
Sbjct: 714 QDM-VKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNE 772

Query: 209 GQMDKAHDLFLDM 221
           G++ +A  L  D+
Sbjct: 773 GRVQEAQKLVSDL 785



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 1/254 (0%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LD M + G R +   YSTL+           A  ++  M   G +   + Y T++N  CK
Sbjct: 81  LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS- 126
              V+ +     ++L  G         +L         +  A ++F++M   +     S 
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSV 200

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY+  I GLC+ G + EA +L + +    C+     Y+ LI   C IG  + A ++   +
Sbjct: 201 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 260

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
                +PNV TY I+I   C +G++++A+ +F  M   G+ P  +TFN L+ G  +    
Sbjct: 261 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 320

Query: 247 SKVVELLHRMDERN 260
               +LL  M++ N
Sbjct: 321 VSAFQLLSVMEKGN 334



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 3/231 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ +L  M++ G+ P+   ++ LI+G C  GE   + ++   M   GC  NV TY  
Sbjct: 495 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 554

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C    VEE+  +   M S G+ P   TY  L     +  +++ A ++   M  + 
Sbjct: 555 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 614

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLET 178
               +  Y+  + G   +   + A  L  T  +    L  E    +CL   + ++  ++ 
Sbjct: 615 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDH 674

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           A ++   + + G+ P    YN ++ G C +G++ +A  L  DM   G+ P+
Sbjct: 675 ALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 724


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 127/240 (52%), Gaps = 1/240 (0%)

Query: 1   MDEASRLLDLMI-QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA R+ + M  +   RPN+  YS LI G C  G ++ A +L   M   GC  +  TY 
Sbjct: 245 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 304

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI   C     ++++ +  EM +K   P V TY  L   L    ++E A  +F +M   
Sbjct: 305 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     T+N  I+G CK G++V A +L   +    C+  I  Y+ L++GLC++ K   A
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 424

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L + +   GL+P+ VTYNI++ GFC +GQ++ A ++F  M + G+ P+  TF  L+ G
Sbjct: 425 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 484



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 136/292 (46%), Gaps = 35/292 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++LD M  +   PN   Y+ LID  C  G+I+ A  +F  M  +G    ++T+N L
Sbjct: 317 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 376

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           INGYCK   V  +  L S M     +P + TYN L  GL  + +   A  L   +  + +
Sbjct: 377 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 436

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  +DG CK G +  A  +F ++     E     ++ LIDGLCK+G+LE A  
Sbjct: 437 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 496

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQ----------------MDKAH--DLFLDMEA 223
           +  S+ + G+  + VT+  +I G C  G+                +  AH  + FLD   
Sbjct: 497 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 556

Query: 224 K-----------------GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           K                 G+ P+ VT   L+ G  R  ET+  +++L RM +
Sbjct: 557 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 608



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 132/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  ++  G+ P+   Y+ L+DGFC  G+++ A  +F SM+  G   +  T+  LI
Sbjct: 423 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 482

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +E++  +   M+ KGI    VT+  L  G  +I + +    LF+ M  +   
Sbjct: 483 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 542

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N F+D L K+  + EA  +   +        +  ++ LI+G C+ G+   + ++
Sbjct: 543 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 602

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + G  PNV TY I+I+G CN+G++++A  +   M + GV+PN  T+  L+   ++
Sbjct: 603 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 662

Query: 243 NNETSKVVELLHRM 256
                +  +++  M
Sbjct: 663 AGRLDRAFQIVSTM 676



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 125/254 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL +M +   +PN   Y+ L++G C   +  +A  L   +  NG + + VTYN L++
Sbjct: 389 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 448

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK   +  + N+++ M S G+ P   T+  L  GL ++ ++E A  +   M    ++ 
Sbjct: 449 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 508

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+   IDG CK G   +   LF  +   +C      ++C +D L K  KL  A  + 
Sbjct: 509 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 568

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + GL+P+VVT+ I+I G C  G+   +  +   M+  G +PN  T+  ++ G   N
Sbjct: 569 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 628

Query: 244 NETSKVVELLHRMD 257
               +   +L  M 
Sbjct: 629 GRVEEAETILFSMS 642



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 7/250 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTYNTLINGYCK 67
           M+  G       Y T+++  C  G + +A E+F    +    G   +V T   L N  C+
Sbjct: 185 MVNEGFVLGGIDYRTVVNALCKNGFV-QAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CR 241

Query: 68  TKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             D+ E+  ++ +M  +   RP  VTY+ L HGL E  ++E A +L  EM        T 
Sbjct: 242 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 301

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   I   C  G   +A ++   +    C   +  Y+ LID LC+ GK+E A  +F+ +
Sbjct: 302 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 361

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL P ++T+N +I+G+C +G +  A  L   ME     PN  T+N LM G  R +++
Sbjct: 362 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 421

Query: 247 SKVVELLHRM 256
            K   LL R+
Sbjct: 422 YKAFLLLRRV 431



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 117/244 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  + + M   G+ P+ F ++ LIDG C  G +++A  +  SM   G   + VT+  
Sbjct: 456 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 515

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK    ++   L+  M+      T  T+N     L + +++  A  +  +M    
Sbjct: 516 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 575

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   I+G C+ G    + ++   ++   C   +  Y+ +I+GLC  G++E A 
Sbjct: 576 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 635

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +  S+   G+ PN  TY +++      G++D+A  +   M   G  PN   ++ L+ G 
Sbjct: 636 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695

Query: 241 IRNN 244
           + +N
Sbjct: 696 VLSN 699



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 1/254 (0%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LD M + G R +   YSTL+           A  ++  M   G +   + Y T++N  CK
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS- 126
              V+ +     ++L  G         +L         +  A ++F++M   +     S 
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 266

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY+  I GLC+ G + EA +L + +    C+     Y+ LI   C IG  + A ++   +
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
                +PNV TY I+I   C +G++++A+ +F  M   G+ P  +TFN L+ G  +    
Sbjct: 327 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 386

Query: 247 SKVVELLHRMDERN 260
               +LL  M++ N
Sbjct: 387 VSAFQLLSVMEKGN 400



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 23/237 (9%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++L+ M Q G  PN + Y+ +I+G C  G ++ A  +  SM   G   N  TY  L+  +
Sbjct: 601 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 660

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF------------ 113
            K   ++ +  + S M+  G +P    Y+ L  G    +    A  L             
Sbjct: 661 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 720

Query: 114 ---------DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
                    +E++   V  E   YN  + GLCK G I+EA +L + + V       +A S
Sbjct: 721 EENDNNCLSNEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDM-VKHGLFPDKAIS 778

Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
            +I+  CK  K +   E  + +     +P+  +Y  +IHG  N+G++ +A  L  D+
Sbjct: 779 SIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 835



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 21/232 (9%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ +L  M++ G+ P+   ++ LI+G C  GE   + ++   M   GC  NV TY  
Sbjct: 561 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 620

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C    VEE+  +   M S G+ P   TY  L     +  +++ A ++   M  + 
Sbjct: 621 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 680

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL-------FRTL------------RVLKCELGIE 161
               +  Y+  + G   +   + A  L        R+L             + KC +  E
Sbjct: 681 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTE 740

Query: 162 -AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
             Y+ L+ GLCK G++  A +L Q + + GL P+    +I+ H +C   + D
Sbjct: 741 DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH-YCKTCKYD 791


>gi|255661002|gb|ACU25670.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 376

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 134/255 (52%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +DE   + +LM +     ++  +  L+ GFC  G I+++  +    +  G + +   Y+ 
Sbjct: 75  VDEVISIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLEMAZXKGGVLDAFAYSA 134

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING CK  ++++++ + ++M+  G +P    YNTL +GL    + E A+++F EM    
Sbjct: 135 MINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGXVR 194

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            +    TYNT I+GLCKN    EA +L + +        +  YS L+ GLC   K+E A 
Sbjct: 195 CSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSMLMKGLCLDHKVERAL 254

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +L+  +   G  P+V  +NI+IHG C+ G+   A  L+ DM     APN VT NTLM G 
Sbjct: 255 QLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWKCAPNLVTHNTLMEGF 314

Query: 241 IRNNETSKVVELLHR 255
            ++ +    + +  R
Sbjct: 315 YKDGDIRNALVIWAR 329



 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 126/232 (54%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D+A  +L+ MI+ G +PNA VY+TLI+G     + + A  +F  M    C   ++TYNT
Sbjct: 145 LDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGXVRCSPTIITYNT 204

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING CK +   E+ +L  +ML KG+ P+V+TY+ L  GL   H+VE AL+L++++    
Sbjct: 205 LINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKG 264

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
              +   +N  I GLC  G    A  L+  +   KC   +  ++ L++G  K G +  A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWKCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
            ++    R GL P++++YNI + G C+  ++  A     D   K + P  +T
Sbjct: 325 VIWARXLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRKKIVPTKIT 376



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 127/254 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++++  +L++   +G   +AF YS +I+G C    +D+A  +   M  +GC  N   YNT
Sbjct: 110 INKSLHVLEMAZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNT 169

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING       E+++ ++ EM      PT++TYNTL +GL +      A  L  +M    
Sbjct: 170 LINGLVGASKFEDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKG 229

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     TY+  + GLC +  +  A +L+  +     +  ++ ++ LI GLC +GK + A 
Sbjct: 230 LNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLAL 289

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            L+  + R    PN+VT+N ++ GF  DG +  A  ++      G+ P+ +++N  + G 
Sbjct: 290 SLYFDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYNITLKGL 349

Query: 241 IRNNETSKVVELLH 254
              N     +  LH
Sbjct: 350 CSCNRICDAILFLH 363



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 118/229 (51%), Gaps = 1/229 (0%)

Query: 31  CLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTV 90
           C +G+ID    ++  +  +    + V +N ++NGY +   +++   L+  M ++G R +V
Sbjct: 1   CESGDIDGPERVYKEIVESKVSPDAVVHNAMLNGYFRVAKIKDCFELWEMMGNEGNR-SV 59

Query: 91  VTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRT 150
            ++N +  GLF+  +V+  + +++ M+ SD   ++ T+   + G CKNGYI ++  +   
Sbjct: 60  SSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLEM 119

Query: 151 LRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
                  L   AYS +I+GLCK   L+ A  +   + + G  PN   YN +I+G     +
Sbjct: 120 AZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 211 MDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
            + A  +F +M     +P  +T+NTL+ G  +N    +  +L+  M E+
Sbjct: 180 FEDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEK 228


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 127/240 (52%), Gaps = 1/240 (0%)

Query: 1   MDEASRLLDLMI-QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
           + EA R+ + M  +   RPN+  YS LI G C  G ++ A +L   M   GC  +  TY 
Sbjct: 222 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 281

Query: 60  TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
            LI   C     ++++ +  EM +K   P V TY  L   L    ++E A  +F +M   
Sbjct: 282 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            +     T+N  I+G CK G++V A +L   +    C+  I  Y+ L++GLC++ K   A
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 401

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
           + L + +   GL+P+ VTYNI++ GFC +GQ++ A ++F  M + G+ P+  TF  L+ G
Sbjct: 402 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 461



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 136/292 (46%), Gaps = 35/292 (11%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D+A ++LD M  +   PN   Y+ LID  C  G+I+ A  +F  M  +G    ++T+N L
Sbjct: 294 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 353

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           INGYCK   V  +  L S M     +P + TYN L  GL  + +   A  L   +  + +
Sbjct: 354 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 413

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  TYN  +DG CK G +  A  +F ++     E     ++ LIDGLCK+G+LE A  
Sbjct: 414 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 473

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQ----------------MDKAH--DLFLDMEA 223
           +  S+ + G+  + VT+  +I G C  G+                +  AH  + FLD   
Sbjct: 474 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 533

Query: 224 K-----------------GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           K                 G+ P+ VT   L+ G  R  ET+  +++L RM +
Sbjct: 534 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 585



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 132/254 (51%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A  LL  ++  G+ P+   Y+ L+DGFC  G+++ A  +F SM+  G   +  T+  LI
Sbjct: 400 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 459

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G CK   +E++  +   M+ KGI    VT+  L  G  +I + +    LF+ M  +   
Sbjct: 460 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 519

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
               T+N F+D L K+  + EA  +   +        +  ++ LI+G C+ G+   + ++
Sbjct: 520 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 579

Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
            + + + G  PNV TY I+I+G CN+G++++A  +   M + GV+PN  T+  L+   ++
Sbjct: 580 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 639

Query: 243 NNETSKVVELLHRM 256
                +  +++  M
Sbjct: 640 AGRLDRAFQIVSTM 653



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 125/254 (49%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A +LL +M +   +PN   Y+ L++G C   +  +A  L   +  NG + + VTYN L++
Sbjct: 366 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 425

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G+CK   +  + N+++ M S G+ P   T+  L  GL ++ ++E A  +   M    ++ 
Sbjct: 426 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 485

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
           +  T+   IDG CK G   +   LF  +   +C      ++C +D L K  KL  A  + 
Sbjct: 486 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 545

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
             + + GL+P+VVT+ I+I G C  G+   +  +   M+  G +PN  T+  ++ G   N
Sbjct: 546 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 605

Query: 244 NETSKVVELLHRMD 257
               +   +L  M 
Sbjct: 606 GRVEEAETILFSMS 619



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 7/250 (2%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTYNTLINGYCK 67
           M+  G       Y T+++  C  G + +A E+F    +    G   +V T   L N  C+
Sbjct: 162 MVNEGFVLGGIDYRTVVNALCKNGFV-QAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CR 218

Query: 68  TKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
             D+ E+  ++ +M  +   RP  VTY+ L HGL E  ++E A +L  EM        T 
Sbjct: 219 RDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTR 278

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY   I   C  G   +A ++   +    C   +  Y+ LID LC+ GK+E A  +F+ +
Sbjct: 279 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 338

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
            + GL P ++T+N +I+G+C +G +  A  L   ME     PN  T+N LM G  R +++
Sbjct: 339 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 398

Query: 247 SKVVELLHRM 256
            K   LL R+
Sbjct: 399 YKAFLLLRRV 408



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 117/244 (47%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A  + + M   G+ P+ F ++ LIDG C  G +++A  +  SM   G   + VT+  
Sbjct: 433 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 492

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK    ++   L+  M+      T  T+N     L + +++  A  +  +M    
Sbjct: 493 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 552

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           +     T+   I+G C+ G    + ++   ++   C   +  Y+ +I+GLC  G++E A 
Sbjct: 553 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 612

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            +  S+   G+ PN  TY +++      G++D+A  +   M   G  PN   ++ L+ G 
Sbjct: 613 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672

Query: 241 IRNN 244
           + +N
Sbjct: 673 VLSN 676



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 39/253 (15%)

Query: 6   RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
           ++L+ M Q G  PN + Y+ +I+G C  G ++ A  +  SM   G   N  TY  L+  +
Sbjct: 578 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 637

Query: 66  CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG-------------------------- 99
            K   ++ +  + S M+  G +P    Y+ L  G                          
Sbjct: 638 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 697

Query: 100 -----------LFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
                      +F +  V+HALK+ DE++   V  E   YN  + GLCK G I+EA +L 
Sbjct: 698 EENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLT 756

Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
           + + V       +A S +I+  CK  K +   E  + +     +P+  +Y  +IHG  N+
Sbjct: 757 QDM-VKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNE 815

Query: 209 GQMDKAHDLFLDM 221
           G++ +A  L  D+
Sbjct: 816 GRVQEAQKLVSDL 828



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 1/254 (0%)

Query: 8   LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
           LD M + G R +   YSTL+           A  ++  M   G +   + Y T++N  CK
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183

Query: 68  TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHSDVAAETS 126
              V+ +     ++L  G         +L         +  A ++F++M +  +    + 
Sbjct: 184 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 243

Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
           TY+  I GLC+ G + EA +L + +    C+     Y+ LI   C IG  + A ++   +
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 303

Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
                +PNV TY I+I   C +G++++A+ +F  M   G+ P  +TFN L+ G  +    
Sbjct: 304 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 363

Query: 247 SKVVELLHRMDERN 260
               +LL  M++ N
Sbjct: 364 VSAFQLLSVMEKGN 377



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 3/231 (1%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ +L  M++ G+ P+   ++ LI+G C  GE   + ++   M   GC  NV TY  
Sbjct: 538 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 597

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +ING C    VEE+  +   M S G+ P   TY  L     +  +++ A ++   M  + 
Sbjct: 598 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 657

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA--YSCLIDGLCKIGKLET 178
               +  Y+  + G   +   + A  L  T  +    L  E    +CL   + ++  ++ 
Sbjct: 658 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDH 717

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
           A ++   + + G+ P    YN ++ G C +G++ +A  L  DM   G+ P+
Sbjct: 718 ALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 767


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A ++ D M+ R    + +    ++ G C  G+++   +L       GCM N+V YNTLI+
Sbjct: 156 ACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLID 215

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           GYCK  D E +  L+ E+  KG  PTV TY  + +G  +  + E   KL  EM    +  
Sbjct: 216 GYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDV 275

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
               YN  ID   K+G  +EAA+    +    C+  +  Y+ LI G C  G++  A +L 
Sbjct: 276 SIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLL 335

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
           +   + GL+PN V+Y  +IH +C  G+  +A DL + M  +G  P+ VT+  L+ G I  
Sbjct: 336 EQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVA 395

Query: 244 NETSKVVELLHRMDER 259
            E    + + ++M E+
Sbjct: 396 GEVDVALTVRNKMVEK 411



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 130/256 (50%), Gaps = 4/256 (1%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           EA+  +  MI+ G  P+   Y+ LI G C  GE+ +A +L       G + N V+Y  LI
Sbjct: 295 EAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLI 354

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + YCK  +   +L+L  +M  +G +P +VTY  L HGL    +V+ AL + ++M    V 
Sbjct: 355 HNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVL 414

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY--SCLIDGLCKIGKLETAW 180
            + + YN  + GLCK G +  A  L   +  L   +  +A+  + L+DG  + G  E A 
Sbjct: 415 PDANIYNVLMSGLCKKGRLPAAKVLLAEM--LDQNVAPDAFITATLVDGFIRHGDFEEAK 472

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           +LF+     G+ P VV YN MI G+C  G M  A   F  M     +P+  T++T++ G 
Sbjct: 473 KLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGY 532

Query: 241 IRNNETSKVVELLHRM 256
           I+ N+    + +   M
Sbjct: 533 IKMNDLHGALRMFGLM 548



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 133/273 (48%), Gaps = 36/273 (13%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
           +A +LL+  I+RG+ PN   Y+ LI  +C  GE  RA +L + M   G   ++VTY  LI
Sbjct: 330 KAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALI 389

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           +G     +V+ +L + ++M+ KG+ P    YN L  GL +  ++  A  L  EM   +VA
Sbjct: 390 HGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVA 449

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
            +     T +DG  ++G   EA +LF        + G+  Y+ +I G CK G ++ A   
Sbjct: 450 PDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLC 509

Query: 183 FQ-----------------------------SLPRVGLM------PNVVTYNIMIHGFCN 207
           F+                             +L   GLM      PNVVTY ++I+GFC 
Sbjct: 510 FKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCL 569

Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
            G +++A   F  M +  + PN VT+ T+++GC
Sbjct: 570 SGDINRAEKTFKQMLSLRLKPNVVTY-TILIGC 601



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 120/243 (49%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +D A  + + M+++GV P+A +Y+ L+ G C  G +  A+ L   M       +     T
Sbjct: 398 VDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITAT 457

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L++G+ +  D EE+  L+   + KGI P VV YN +  G  +   ++ AL  F  M    
Sbjct: 458 LVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGL 517

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
            + +  TY+T IDG  K   +  A  +F  +    C+  +  Y+ LI+G C  G +  A 
Sbjct: 518 HSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAE 577

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           + F+ +  + L PNVVTY I+I  FC    + KA   F  M  +   PN VT+N LM G 
Sbjct: 578 KTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637

Query: 241 IRN 243
             N
Sbjct: 638 TNN 640



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 38/290 (13%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           +++  +L++    RG  PN   Y+TLIDG+C  G+ +RA  LF  + + G +  V TY  
Sbjct: 188 VEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGA 247

Query: 61  LINGYCKT---------------KDVEESLNLYSE--------------------MLSKG 85
           +ING+CK                + ++ S+++Y+                     M+  G
Sbjct: 248 IINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSG 307

Query: 86  IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
             P + TYN L  G     +V  A +L ++     +     +Y   I   CK G  + A 
Sbjct: 308 CDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRAL 367

Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
           +L   +     +  +  Y+ LI GL   G+++ A  +   +   G++P+   YN+++ G 
Sbjct: 368 DLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGL 427

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN---ETSKVVEL 252
           C  G++  A  L  +M  + VAP+     TL+ G IR+    E  K+ EL
Sbjct: 428 CKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFEL 477



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 36/236 (15%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVS-MDINGCMHNVVTYNTL 61
           E   LL +M  + + P    +S +I  F   G +DRA E + + + I+ C+ +V + N+L
Sbjct: 84  EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSL 143

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           +N   K                              HG     +VE A K++DEM   + 
Sbjct: 144 LNVLVK------------------------------HG-----KVEIACKVYDEMVDRNG 168

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
             +  T    + GLCK G + +  +L        C   I  Y+ LIDG CK G  E A  
Sbjct: 169 EVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANV 228

Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           LF+ L   G +P V TY  +I+GFC  G+ +    L ++M  +G+  +   +N ++
Sbjct: 229 LFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNII 284



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 12/222 (5%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M +A      MIQ    P+ F YST+IDG+    ++  A  +F  M    C  NVVTY  
Sbjct: 503 MKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTL 562

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LING+C + D+  +   + +MLS  ++P VVTY  L     +   +  A   F++M    
Sbjct: 563 LINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEK 622

Query: 121 VAAETSTYNTFIDGLCKN-GYIVEAAELFRTLRVLKCE-LGI----------EAYSCLID 168
                 TYN  ++GL  N  +++      +T   L  E  G+           +Y+ ++ 
Sbjct: 623 CLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILI 682

Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
            LC+   ++ A  L   +   G +P+ V+   ++HG C +G+
Sbjct: 683 CLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGR 724


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 130/259 (50%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + EA  L   + + G+ P    Y+  IDG+C  G+++ AR L   M   GC+ NV TY  
Sbjct: 361 LKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 420

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           L+ G      +  +   + EMLSKG++P    YNT       +  +  AL+L + +    
Sbjct: 421 LMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEG 480

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
           ++++T TYN  I GLCK G + +A EL   +     +     Y+CLI   C+ G L  A 
Sbjct: 481 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 540

Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
           ++F ++   GL+P+ VT+ ++IH +C  G +  A+  F  M  +GV PN +T+N L+   
Sbjct: 541 KIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 600

Query: 241 IRNNETSKVVELLHRMDER 259
            R   T       H M ER
Sbjct: 601 CRMGRTQLASHHFHEMLER 619



 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 135/278 (48%), Gaps = 36/278 (12%)

Query: 11  MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI--NGCMHNVVTYNTLINGYCKT 68
           M+Q G+ P+   Y+TL+D F   G  D+   L   M+   +GC+ N VTYN +I G  + 
Sbjct: 195 MLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 254

Query: 69  KDVEESLNLYS----------------------------------EMLSKGIRPTVVTYN 94
            D+EE+  L                                    EM ++GI PTVVTYN
Sbjct: 255 GDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 314

Query: 95  TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
            + HGL +   VE A   F EM+   +  +  TYN+ ++G CK G + EA  LF  LR  
Sbjct: 315 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 374

Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
                +  Y+  IDG C++G LE A  L + +   G +PNV TY I++ G  N   +  A
Sbjct: 375 GLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMA 434

Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
            + F +M +KG+ P+C  +NT +   +   + ++ +EL
Sbjct: 435 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARALEL 472



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 118/236 (50%)

Query: 4   ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
           A    D M+ +G++P+ F Y+T I    + G+I RA EL   + + G   + VTYN LI+
Sbjct: 434 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIH 493

Query: 64  GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
           G CKT +++++  L  +M+S G++P  +TY  L H   E   +  A K+F+ M    +  
Sbjct: 494 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 553

Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
              T+   I   C+ G +  A   FR +     E     Y+ LI  LC++G+ + A   F
Sbjct: 554 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 613

Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
             +   GL+ N  TY ++I G C  G  + A   + +M   G+ P+ +T   L+ G
Sbjct: 614 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKG 669



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 50/279 (17%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++EA+ L++ M +   + ++F Y+ LI G    G + +  +L + M+  G M  VVTYN 
Sbjct: 257 LEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNA 315

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+G  ++  VE +   ++EM + G+ P V+TYN+L +G  +   ++ AL LF +++ + 
Sbjct: 316 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 375

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA-------YSCLIDGLCKI 173
           +A    TYN  IDG C+ G + EA       R+LK E+G +        Y+ L+ G   +
Sbjct: 376 LAPTVLTYNIRIDGYCRLGDLEEA-------RILKEEMGEQGCLPNVCTYTILMKGSLNV 428

Query: 174 GKLETAWELFQSLPRVGLMP-----------------------------------NVVTY 198
             L  A E F  +   GL P                                   + VTY
Sbjct: 429 CSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTY 488

Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
           NI+IHG C  G +  A +L + M + G+ P+C+T+  L+
Sbjct: 489 NILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLI 527



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 10/213 (4%)

Query: 3   EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
            A  L ++++  G+  +   Y+ LI G C TG +  A+EL + M  NG   + +TY  LI
Sbjct: 468 RALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLI 527

Query: 63  NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
           + +C+   + E+  +++ M+S G+ P+ VT+  + H       +  A   F +M    V 
Sbjct: 528 HAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVE 587

Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLET 178
               TYN  I  LC+ G    A+  F  +     E G+ A    Y+ LIDG CK+G  E 
Sbjct: 588 PNEITYNVLIHALCRMGRTQLASHHFHEM----LERGLVANKYTYTLLIDGNCKVGNWED 643

Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
           A   +  + + G+ P+ +T+  ++ GF  DG +
Sbjct: 644 AMRFYFEMHQNGIHPDYLTHKALVKGF--DGHV 674



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 3/199 (1%)

Query: 43  FVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFE 102
           F  M  +G   +V   N ++         ++   ++ EML  GI P++VTYNTL     +
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 103 IHQVEHALKLFDEMQ--HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI 160
             + +    L  EM+   S       TYN  I GL + G + EAAEL   +R+ K +   
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASS 275

Query: 161 EAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD 220
             Y+ LI GL   G ++  ++L   +   G+MP VVTYN MIHG    G ++ A   F +
Sbjct: 276 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 335

Query: 221 MEAKGVAPNCVTFNTLMLG 239
           M A G+ P+ +T+N+L+ G
Sbjct: 336 MRAMGLLPDVITYNSLLNG 354



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 3/212 (1%)

Query: 50  GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG--IRPTVVTYNTLFHGLFEIHQVE 107
           G   ++VTYNTL++ + K    ++   L  EM ++G    P  VTYN +  GL     +E
Sbjct: 199 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 258

Query: 108 HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
            A +L + M+ S   A + TYN  I GL   G + +  +L   +        +  Y+ +I
Sbjct: 259 EAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMI 317

Query: 168 DGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA 227
            GL + G +E A   F  +  +GL+P+V+TYN +++G+C  G + +A  LF D+   G+A
Sbjct: 318 HGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLA 377

Query: 228 PNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
           P  +T+N  + G  R  +  +   L   M E+
Sbjct: 378 PTVLTYNIRIDGYCRLGDLEEARILKEEMGEQ 409



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           + +A  L   M+  G++P+   Y+ LI   C  G +  AR++F +M  +G + + VT+  
Sbjct: 501 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 560

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           +I+ YC+  ++  +   + +ML +G+ P  +TYN L H L  + + + A   F EM    
Sbjct: 561 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 620

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF 148
           + A   TY   IDG CK G   +A   +
Sbjct: 621 LVANKYTYTLLIDGNCKVGNWEDAMRFY 648



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVA--PNCVTFNTLMLGCIRNNE 245
           ++G+ P++VTYN ++  F  +G+ DK   L  +ME +G    PN VT+N ++ G  R  +
Sbjct: 197 QLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGD 256

Query: 246 TSKVVELLHRM 256
             +  EL+  M
Sbjct: 257 LEEAAELVEGM 267


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 130/276 (47%), Gaps = 36/276 (13%)

Query: 17  RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
           RPN   Y+ LIDGF   G  DRA ELF  M+  G   NV+T NTL++G CK   V  ++ 
Sbjct: 390 RPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVE 449

Query: 77  LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
            ++EM  KG++    TY  L      ++ +  A++ F+EM  S  + +   Y + I GLC
Sbjct: 450 FFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLC 509

Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL-------------- 182
             G + +A+ +   L++    L    Y+ LI G CK  KLE  +EL              
Sbjct: 510 IAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTI 569

Query: 183 --------------FQSLPRV-------GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
                         F +  +V       GL P+VVTY  +IH +C+   +D+   +F +M
Sbjct: 570 TYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEM 629

Query: 222 -EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
                V PN V +N L+    RNN+  + + L+  M
Sbjct: 630 CSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDM 665



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 7/244 (2%)

Query: 1   MDEASRLLDLMIQRG------VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDI-NGCMH 53
           +DEA ++ D +  +G      V P+  +++TLIDG C  G+ +    L   M + N    
Sbjct: 332 IDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRP 391

Query: 54  NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
           N VTYN LI+G+ K  + + +  L+ +M  +G++P V+T NTL  GL +  +V  A++ F
Sbjct: 392 NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFF 451

Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
           +EM+   +    +TY   I   C    I  A + F  +    C      Y  LI GLC  
Sbjct: 452 NEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIA 511

Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
           G++  A  +   L   G   +   YN++I GFC   ++++ ++L  +ME  GV P+ +T+
Sbjct: 512 GRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITY 571

Query: 234 NTLM 237
           NTL+
Sbjct: 572 NTLI 575



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 7/259 (2%)

Query: 7   LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM------DINGCMHNVVTYNT 60
           LL  M +R +RP+   +  L++  C    ID A ++F  +      +  G   +VV +NT
Sbjct: 303 LLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNT 362

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGI-RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
           LI+G CK    E+ L+L  EM    I RP  VTYN L  G F+    + A +LF +M   
Sbjct: 363 LIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEE 422

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V     T NT +DGLCK+G +  A E F  ++    +     Y+ LI   C +  +  A
Sbjct: 423 GVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRA 482

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
            + F+ +   G  P+ V Y  +I G C  G+M+ A  +   ++  G + +   +N L+ G
Sbjct: 483 MQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISG 542

Query: 240 CIRNNETSKVVELLHRMDE 258
             +  +  +V ELL  M+E
Sbjct: 543 FCKKKKLERVYELLTEMEE 561



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 125/293 (42%), Gaps = 36/293 (12%)

Query: 2   DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
           D A  L   M + GV+PN    +TL+DG C  G + RA E F  M   G   N  TY  L
Sbjct: 410 DRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTAL 469

Query: 62  INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
           I+ +C   ++  ++  + EMLS G  P  V Y +L  GL    ++  A  +  +++ +  
Sbjct: 470 ISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGF 529

Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
           + + S YN  I G CK   +    EL   +     +     Y+ LI  L K G   TA +
Sbjct: 530 SLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASK 589

Query: 182 LFQSLPRVGLMPNVVTY------------------------------------NIMIHGF 205
           + + + + GL P+VVTY                                    NI+I   
Sbjct: 590 VMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDAL 649

Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
           C +  +D+A  L  DM+ K V PN  T+N ++ G        K  EL+ RM E
Sbjct: 650 CRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVE 702



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 9/252 (3%)

Query: 13  QRGVRPNAFVYSTLIDGFCLTGEIDRARE-LFVSMDINGCMHNVVTYNTLINGYCKTKDV 71
           +RGV P+ F  + L+   C   +   A E L   M + G + +  + N L+    + +D+
Sbjct: 239 ERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAV-DAASCNALLTWLGRGRDI 297

Query: 72  EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS------DVAAET 125
           +    L +EM  + IRP+VVT+  L + L +  +++ AL++FD ++         V  + 
Sbjct: 298 KRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDV 357

Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKC-ELGIEAYSCLIDGLCKIGKLETAWELFQ 184
             +NT IDGLCK G   +   L   +++          Y+CLIDG  K G  + A ELF+
Sbjct: 358 VLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFR 417

Query: 185 SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
            +   G+ PNV+T N ++ G C  G++ +A + F +M+ KG+  N  T+  L+      N
Sbjct: 418 QMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVN 477

Query: 245 ETSKVVELLHRM 256
             ++ ++    M
Sbjct: 478 NINRAMQCFEEM 489



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 1/237 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           ++ A +  + M+  G  P+A VY +LI G C+ G ++ A  +   + + G   +   YN 
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
           LI+G+CK K +E    L +EM   G++P  +TYNTL   L +      A K+ ++M    
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598

Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
           +     TY   I   C    + E  ++F  +    K       Y+ LID LC+   ++ A
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
             L + +    + PN  TYN ++ G  +   + KA +L   M  +   P+ +T   L
Sbjct: 659 ISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVL 715



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 1/214 (0%)

Query: 1   MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
           M++AS ++  +   G   +   Y+ LI GFC   +++R  EL   M+  G   + +TYNT
Sbjct: 514 MNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNT 573

Query: 61  LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM-QHS 119
           LI+   KT D   +  +  +M+ +G+RP+VVTY  + H       V+  +K+F EM   S
Sbjct: 574 LISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTS 633

Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
            V   T  YN  ID LC+N  +  A  L   ++V +       Y+ ++ G+     L  A
Sbjct: 634 KVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKA 693

Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
           +EL   +      P+ +T  ++       G+++K
Sbjct: 694 FELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 49/112 (43%)

Query: 16  VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESL 75
           V PN  +Y+ LID  C   ++DRA  L   M +     N  TYN ++ G    K + ++ 
Sbjct: 635 VPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAF 694

Query: 76  NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
            L   M+ +  RP  +T   L   L  + ++E      +  Q S   A + T
Sbjct: 695 ELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSSYPASSQT 746


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.139    0.418 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,829,599,829
Number of Sequences: 23463169
Number of extensions: 147915591
Number of successful extensions: 506276
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8433
Number of HSP's successfully gapped in prelim test: 4247
Number of HSP's that attempted gapping in prelim test: 324576
Number of HSP's gapped (non-prelim): 81116
length of query: 260
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 121
effective length of database: 9,097,814,876
effective search space: 1100835599996
effective search space used: 1100835599996
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 75 (33.5 bits)