BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044047
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 153/254 (60%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L D MI+R + P+ F YS+LI+GFC+ +D A+ +F M C NVVTYNTLI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G+CK K VEE + L+ EM +G+ VTYNTL GLF+ + A K+F +M V
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TY+ +DGLCK G + +A +F L+ K E I Y+ +I+G+CK GK+E W+L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F SL G+ PNV+ Y MI GFC G ++A LF +M+ G PN T+NTL+ +R
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 243 NNETSKVVELLHRM 256
+ + + EL+ M
Sbjct: 583 DGDKAASAELIKEM 596
Score = 181 bits (460), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 142/256 (55%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+ASRLL MI+R + PN +S LID F G++ A +L+ M ++ TY++LI
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+C ++E+ +++ M+SK P VVTYNTL G + +VE ++LF EM +
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T TYNT I GL + G A ++F+ + I YS L+DGLCK GKLE A +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ L + + P++ TYNIMI G C G+++ DLF + KGV PN + + T++ G R
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 243 NNETSKVVELLHRMDE 258
+ L M E
Sbjct: 548 KGLKEEADALFREMKE 563
Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 141/254 (55%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M+ RG +P+ F Y T+++G C G+ID A L M+ +VV Y T+I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ C K+V ++LNL++EM +KGIRP VVTYN+L L + A +L +M +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T++ ID K G +VEA +L+ + + I YS LI+G C +L+ A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ + PNVVTYN +I GFC ++++ +LF +M +G+ N VT+NTL+ G +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 243 NNETSKVVELLHRM 256
+ ++ +M
Sbjct: 443 AGDCDMAQKIFKKM 456
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 129/237 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA + +LMI + PN Y+TLI GFC ++ ELF M G + N VTYNT
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G + D + + ++ +M+S G+ P ++TY+ L GL + ++E AL +F+ +Q S
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TYN I+G+CK G + + +LF +L + + + Y+ +I G C+ G E A
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
LF+ + G +PN TYN +I DG + +L +M + G + T + ++
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 130/259 (50%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA L+D M +PN ++TLI G L + A L M GC ++ TY T
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++NG CK D++ +L+L +M I VV Y T+ L V AL LF EM +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TYN+ I LC G +A+ L + K + +S LID K GKL A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L+ + + + P++ TY+ +I+GFC ++D+A +F M +K PN VT+NTL+ G
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 241 IRNNETSKVVELLHRMDER 259
+ + +EL M +R
Sbjct: 406 CKAKRVEEGMELFREMSQR 424
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 7/260 (2%)
Query: 8 LDLMIQRGVRP-------NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
DL+I G R + + Y+ LI+ FC ++ A + M G ++VT ++
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+NGYC K + E++ L +M +P VT+NTL HGLF ++ A+ L D M
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY T ++GLCK G I A L + + K E + Y+ +ID LC + A
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
LF + G+ PNVVTYN +I CN G+ A L DM + + PN VTF+ L+
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 241 IRNNETSKVVELLHRMDERN 260
++ + + +L M +R+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRS 355
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A L M+Q P+ ++ L+ + D L M +++ +YN
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LIN +C+ + +L + +M+ G P +VT ++L +G ++ A+ L D+M +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
T T+NT I GL + EA L + C+ + Y +++GLCK G ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + + + +VV Y +I CN ++ A +LF +M+ KG+ PN VT+N+L+
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 241 IRNNETSKVVELLHRMDERN 260
S LL M ER
Sbjct: 301 CNYGRWSDASRLLSDMIERK 320
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A + + + + + P+ + Y+ +I+G C G+++ +LF S+ + G NV+ Y T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+G+C+ EE+ L+ EM G P TYNTL + +L EM+
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 121 VAAETSTYNTFI----DGLCKNGYI 141
+ ST + I DG + Y+
Sbjct: 601 FVGDASTISMVINMLHDGRLEKSYL 625
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 155/254 (61%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L D MIQR + PN Y++LI+GFC+ +D A+++F M C+ +VVTYNTLI
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+CK K V + + L+ +M +G+ VTY TL HG F+ ++A +F +M V
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYNT +DGLCKNG + +A +F L+ K E I Y+ + +G+CK GK+E W+L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F SL G+ P+V+ YN MI GFC G ++A+ LF+ M+ G P+ T+NTL+ +R
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 243 NNETSKVVELLHRM 256
+ + + EL+ M
Sbjct: 568 DGDKAASAELIKEM 581
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 141/256 (55%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+ASRLL M++R + PN +++LID F G++ A +LF M N+VTYN+LI
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+C ++E+ +++ M+SK P VVTYNTL +G + +V ++LF +M +
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T TY T I G + A +F+ + I Y+ L+DGLCK GKLE A +
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ L + + P++ TYNIM G C G+++ DLF + KGV P+ + +NT++ G +
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 243 NNETSKVVELLHRMDE 258
+ L +M E
Sbjct: 533 KGLKEEAYTLFIKMKE 548
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 142/283 (50%), Gaps = 35/283 (12%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L++ M+ +G +P+ Y +I+G C GE D A L M+ +VV Y+T+I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
+ CK + V+++LNL++EM +KGIRP V TY++L
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 97 -----FHGLFEIHQVEHAL----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
F+ L + E L KLFDEM + TYN+ I+G C + + EA ++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
F + C + Y+ LI+G CK K+ ELF+ + R GL+ N VTY +IHGF
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
D A +F M + GV PN +T+NTL+ G +N + K +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 137/259 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA L+D M++ G +P+ ++TL+ G + A L M + GC ++VTY
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+ING CK + + +LNL ++M I VV Y+T+ L + V+ AL LF EM +
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TY++ I LC G +A+ L + K + ++ LID K GKL A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+LF + + + PN+VTYN +I+GFC ++D+A +F M +K P+ VT+NTL+ G
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 241 IRNNETSKVVELLHRMDER 259
+ + +EL M R
Sbjct: 391 CKAKKVVDGMELFRDMSRR 409
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
GV N + Y+ +I+ C ++ A + M G ++VT N+L+NG+C + E+
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
+ L +M+ G +P VT+ TL HGLF+ ++ A+ L + M + TY I+G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LCK G A L + K E + YS +ID LCK ++ A LF + G+ P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
V TY+ +I CN G+ A L DM + + PN VTFN+L+ + + + +L
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 255 RMDERN 260
M +R+
Sbjct: 335 EMIQRS 340
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 3/257 (1%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A +L M++ G P+ ++L++GFC I A L M G + VT+ TL++
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G + E++ L M+ KG +P +VTY + +GL + + + AL L ++M+ + A
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ Y+T ID LCK ++ +A LF + + YS LI LC G+ A L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI- 241
+ + PNVVT+N +I F +G++ +A LF +M + + PN VT+N+L+ G C+
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 242 -RNNETSKVVELLHRMD 257
R +E ++ L+ D
Sbjct: 359 DRLDEAQQIFTLMVSKD 375
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D A + M+ GV PN Y+TL+DG C G++++A +F + + ++ TYN +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
G CK VE+ +L+ + KG++P V+ YNT+ G + E A LF +M+
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
++ TYNT I ++G +AEL + +R + Y + D L
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 35/259 (13%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA L M++ P+ +S L+ + D M+I G HN+ TYN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+IN C+ + +L + +M+ G P++VT N+L +G +++ A+ L D+M
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+T T+ T + GL ++ EA L + V
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVV--------------------------- 198
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
G P++VTY +I+G C G+ D A +L ME + + V ++T++
Sbjct: 199 --------KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 241 IRNNETSKVVELLHRMDER 259
+ + L MD +
Sbjct: 251 CKYRHVDDALNLFTEMDNK 269
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A + + + + + P+ + Y+ + +G C G+++ +LF S+ + G +V+ YNT
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+G+CK EE+ L+ +M G P TYNTL + +L EM+
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Query: 121 VAAETSTYNTFIDGL 135
A + STY D L
Sbjct: 586 FAGDASTYGLVTDML 600
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 149/254 (58%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L D MI+R + P+ F YS+LI+GFC+ +D A+ +F M C NVVTY+TLI
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G+CK K VEE + L+ EM +G+ VTY TL HG F+ ++A +F +M V
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYN +DGLCKNG + +A +F L+ E I Y+ +I+G+CK GK+E WEL
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F +L G+ PNV+ YN MI GFC G ++A L M+ G PN T+NTL+ +R
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 243 NNETSKVVELLHRM 256
+ + EL+ M
Sbjct: 586 DGDREASAELIKEM 599
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 143/256 (55%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+ASRLL MI+R + PN +S LID F G++ A +L+ M ++ TY++LI
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+C ++E+ +++ M+SK P VVTY+TL G + +VE ++LF EM +
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T TY T I G + A +F+ + + I Y+ L+DGLCK GKL A +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ L R + P++ TYNIMI G C G+++ +LF ++ KGV+PN + +NT++ G R
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 243 NNETSKVVELLHRMDE 258
+ LL +M E
Sbjct: 551 KGSKEEADSLLKKMKE 566
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 148/291 (50%), Gaps = 38/291 (13%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M+QRG +P+ Y T+++G C G+ID A L M+ +VV YNT+I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
+G CK K ++++LNL++EM +KGIRP V TY++L
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 97 -----FHGLFEIHQVEHAL----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
F L + E L KL+DEM + + TY++ I+G C + + EA +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
F + C + YS LI G CK ++E ELF+ + + GL+ N VTY +IHGF
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK---VVELLHR 255
D A +F M + GV PN +T+N L+ G +N + +K V E L R
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Score = 154 bits (390), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 140/259 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+D M++ G +P+ F ++TLI G L + A L M GC ++VTY T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++NG CK D++ +L+L +M I VV YNT+ GL + ++ AL LF EM +
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TY++ I LC G +A+ L + K + +S LID K GKL A
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L+ + + + P++ TY+ +I+GFC ++D+A +F M +K PN VT++TL+ G
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 241 IRNNETSKVVELLHRMDER 259
+ + +EL M +R
Sbjct: 409 CKAKRVEEGMELFREMSQR 427
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ + + YS I+ FC ++ A + M G ++VT ++L+NGYC +K + ++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
+ L +M+ G +P T+ TL HGLF ++ A+ L D+M + TY T ++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LCK G I A L + + K E + Y+ +IDGLCK ++ A LF + G+ P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
V TY+ +I CN G+ A L DM + + PN VTF+ L+ ++ + + +L
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 255 RMDERN 260
M +R+
Sbjct: 353 EMIKRS 358
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A L M++ P+ ++ L+ + + L M G H++ TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
IN +C+ + +L + ++M+ G P +VT ++L +G ++ A+ L D+M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+T T+ T I GL + EA L + C+ + Y +++GLCK G ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + + + +VV YN +I G C MD A +LF +M+ KG+ P+ T+++L + C
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL-ISC 302
Query: 241 IRN-NETSKVVELLHRMDERN 260
+ N S LL M ER
Sbjct: 303 LCNYGRWSDASRLLSDMIERK 323
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 39 ARELFVSMDINGCMH--NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
A+ LFV ++ G + V ++ L C + + Y E+L
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR------------- 55
Query: 97 FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
+ L +I +V+ A+ LF +M S +N + + K L ++ L
Sbjct: 56 -NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
+ YS I+ C+ +L A + + ++G P++VT + +++G+C+ ++ A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
L M G P+ TF TL+ G +N+ S+ V L+ +M +R
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 154/254 (60%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L D MI+R + P+ F YS+LI+GFC+ +D A+ +F M C NVVTYNTLI
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G+CK K V+E + L+ EM +G+ VTY TL HG F+ + ++A +F +M V
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TY+ +DGLC NG + A +F L+ K E I Y+ +I+G+CK GK+E W+L
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F SL G+ PNVVTY M+ GFC G ++A LF +M+ +G P+ T+NTL+ +R
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 243 NNETSKVVELLHRM 256
+ + + EL+ M
Sbjct: 584 DGDKAASAELIREM 597
Score = 174 bits (440), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 139/256 (54%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+ASRLL MI+R + PN +S LID F G++ A +L+ M ++ TY++LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+C ++E+ +++ M+SK P VVTYNTL G + +V+ ++LF EM +
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T TY T I G + A +F+ + I YS L+DGLC GK+ETA +
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ L R + P++ TYNIMI G C G+++ DLF + KGV PN VT+ T+M G R
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 243 NNETSKVVELLHRMDE 258
+ L M E
Sbjct: 549 KGLKEEADALFREMKE 564
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 134/243 (55%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M+ +G +P+ Y +++G C G+ID A L M+ VV YNT+I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ C K+V ++LNL++EM +KGIRP VVTYN+L L + A +L +M +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T++ ID K G +VEA +L+ + + I YS LI+G C +L+ A +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ + PNVVTYN +I GFC ++D+ +LF +M +G+ N VT+ TL+ G +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 243 NNE 245
E
Sbjct: 444 ARE 446
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 135/259 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+ M++ G +P++F ++TLI G A L M + GC ++VTY
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++NG CK D++ +L+L +M I P VV YNT+ L V AL LF EM +
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TYN+ I LC G +A+ L + K + +S LID K GKL A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L+ + + + P++ TY+ +I+GFC ++D+A +F M +K PN VT+NTL+ G
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 241 IRNNETSKVVELLHRMDER 259
+ + +EL M +R
Sbjct: 407 CKAKRVDEGMELFREMSQR 425
Score = 147 bits (371), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 127/246 (51%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ N + YS LI+ FC ++ A + M G ++VT N+L+NG+C + ++
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
++L +M+ G +P T+NTL HGLF ++ A+ L D M + TY ++G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LCK G I A L + + K E G+ Y+ +ID LC + A LF + G+ PN
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
VVTYN +I CN G+ A L DM + + PN VTF+ L+ ++ + + +L
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 255 RMDERN 260
M +R+
Sbjct: 351 EMIKRS 356
Score = 131 bits (329), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 129/259 (49%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A L M++ P+ +S L+ + D L M G HN+ TY+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LIN +C+ + +L + ++M+ G P +VT N+L +G +++ A+ L +M
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
++ T+NT I GL ++ EA L + V C+ + Y +++GLCK G ++ A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + + + P VV YN +I CN ++ A +LF +M+ KG+ PN VT+N+L+
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 241 IRNNETSKVVELLHRMDER 259
S LL M ER
Sbjct: 302 CNYGRWSDASRLLSDMIER 320
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 19 NAFVYSTLI-DGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
N FV+ +L+ G C T + F D +G ++ Y + +++++NL
Sbjct: 12 NRFVHRSLLGKGKCGTAPPSFSHCSFWVRDFSGVRYD---YRKISINRLNDLKLDDAVNL 68
Query: 78 YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
+ +M+ P++V ++ L + ++++ + + L ++MQ+ G+
Sbjct: 69 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL--------------GISH 114
Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
N Y YS LI+ C+ +L A + + ++G P++VT
Sbjct: 115 NLY---------------------TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 153
Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
N +++GFC+ ++ A L M G P+ TFNTL+ G R+N S+ V L+ RM
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 12 IQRG-VRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
+QR + P+ + Y+ +I+G C G+++ +LF S+ + G NVVTY T+++G+C+
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
EE+ L+ EM +G P TYNTL + +L EM+ + ST
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 152/254 (59%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L D M++R + P+ YS+LI+GFC+ +D A+++F M C +VVTYNTLI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G+CK K VEE + ++ EM +G+ VTYN L GLF+ + A ++F EM V
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYNT +DGLCKNG + +A +F L+ K E I Y+ +I+G+CK GK+E W+L
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F +L G+ P+VV YN MI GFC G ++A LF +M+ G PN +NTL+ +R
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583
Query: 243 NNETSKVVELLHRM 256
+ + EL+ M
Sbjct: 584 DGDREASAELIKEM 597
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 143/256 (55%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+ASRLL MI+R + P+ F +S LID F G++ A +L+ M ++VTY++LI
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+C ++E+ ++ M+SK P VVTYNTL G + +VE +++F EM +
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T TYN I GL + G A E+F+ + I Y+ L+DGLCK GKLE A +
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ L R + P + TYNIMI G C G+++ DLF ++ KGV P+ V +NT++ G R
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 243 NNETSKVVELLHRMDE 258
+ L M E
Sbjct: 549 KGSKEEADALFKEMKE 564
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 147/291 (50%), Gaps = 38/291 (13%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M+ +G +P+ Y +++G C G+ D A L M+ V+ YNT+I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
+G CK K ++++LNL+ EM +KGIRP VVTY++L
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 97 -----FHGLFEIHQVEHAL----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
F L + E L KL+DEM + TY++ I+G C + + EA ++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
F + C + Y+ LI G CK ++E E+F+ + + GL+ N VTYNI+I G
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK---VVELLHR 255
G D A ++F +M + GV PN +T+NTL+ G +N + K V E L R
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 136/259 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA L+D M G +PN ++TLI G L + A L M GC ++VTY
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++NG CK D + + NL ++M + P V+ YNT+ GL + ++ AL LF EM+
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY++ I LC G +A+ L + K + +S LID K GKL A
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L+ + + + P++VTY+ +I+GFC ++D+A +F M +K P+ VT+NTL+ G
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 241 IRNNETSKVVELLHRMDER 259
+ + +E+ M +R
Sbjct: 407 CKYKRVEEGMEVFREMSQR 425
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 129/246 (52%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ N + YS LI+ FC ++ A + M G N+VT ++L+NGYC +K + E+
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
+ L +M G +P VT+NTL HGLF ++ A+ L D M + TY ++G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LCK G A L + K E G+ Y+ +IDGLCK ++ A LF+ + G+ PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
VVTY+ +I CN G+ A L DM + + P+ TF+ L+ ++ + + +L
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 255 RMDERN 260
M +R+
Sbjct: 351 EMVKRS 356
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A L M++ P+ +S L+ + D L M G HN TY+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LIN +C+ + +L + +M+ G P +VT ++L +G ++ A+ L D+M +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
T T+NT I GL + EA L + C+ + Y +++GLCK G + A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + L P V+ YN +I G C MD A +LF +ME KG+ PN VT+++L + C
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL-ISC 300
Query: 241 IRN-NETSKVVELLHRMDERN 260
+ N S LL M ER
Sbjct: 301 LCNYGRWSDASRLLSDMIERK 321
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 156/254 (61%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L D MI+R + P+ F Y++L++GFC+ +D+A+++F M C +VVTYNTLI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G+CK+K VE+ L+ EM +G+ VTY TL GLF ++A K+F +M V
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TY+ +DGLC NG + +A E+F ++ + +L I Y+ +I+G+CK GK++ W+L
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F SL G+ PNVVTYN MI G C+ + +A+ L M+ G PN T+NTL+ +R
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Query: 243 NNETSKVVELLHRM 256
+ + + EL+ M
Sbjct: 588 DGDKAASAELIREM 601
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 138/256 (53%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+AS+LL MI++ + PN ++ LID F G+ A +L+ M ++ TYN+L+
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+C ++++ ++ M+SK P VVTYNTL G + +VE +LF EM H +
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+T TY T I GL +G A ++F+ + I YS L+DGLC GKLE A E+
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F + + + ++ Y MI G C G++D DLF + KGV PN VT+NT++ G
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Query: 243 NNETSKVVELLHRMDE 258
+ LL +M E
Sbjct: 553 KRLLQEAYALLKKMKE 568
Score = 161 bits (407), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 138/254 (54%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M+QRG +PN Y +++G C G+ D A L M+ +VV +NT+I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ CK + V+++LNL+ EM +KGIRP VVTY++L L + A +L +M +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T+N ID K G VEA +L+ + + I Y+ L++G C +L+ A ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ + P+VVTYN +I GFC +++ +LF +M +G+ + VT+ TL+ G
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 243 NNETSKVVELLHRM 256
+ + ++ +M
Sbjct: 448 DGDCDNAQKVFKQM 461
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 135/259 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+D M++ G RP+ ++TLI G L + A L M GC N+VTY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++NG CK D + +LNL ++M + I VV +NT+ L + V+ AL LF EM+
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY++ I LC G +A++L + K + ++ LID K GK A
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L+ + + + P++ TYN +++GFC ++DKA +F M +K P+ VT+NTL+ G
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 241 IRNNETSKVVELLHRMDER 259
++ EL M R
Sbjct: 411 CKSKRVEDGTELFREMSHR 429
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 122/223 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A ++ + M+ + P+ Y+TLI GFC + ++ ELF M G + + VTY T
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G D + + ++ +M+S G+ P ++TY+ L GL ++E AL++FD MQ S+
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + Y T I+G+CK G + + +LF +L + + + Y+ +I GLC L+ A+
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
L + + G +PN TYN +I DG + +L +M +
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 123/240 (51%)
Query: 21 FVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSE 80
+ Y+ LI+ FC +I A L M G ++VT ++L+NGYC K + +++ L +
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 81 MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
M+ G RP +T+ TL HGLF ++ A+ L D M TY ++GLCK G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
A L + K E + ++ +ID LCK ++ A LF+ + G+ PNVVTY+
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
+I C+ G+ A L DM K + PN VTFN L+ ++ + + +L M +R+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 130/257 (50%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A LL M++ G P+ S+L++G+C I A L M G + +T+ TLI+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G E++ L M+ +G +P +VTY + +GL + + AL L ++M+ + + A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ +NT ID LCK ++ +A LF+ + + YS LI LC G+ A +L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ + PN+VT+N +I F +G+ +A L+ DM + + P+ T+N+L+ G +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 244 NETSKVVELLHRMDERN 260
+ K ++ M ++
Sbjct: 379 DRLDKAKQMFEFMVSKD 395
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 90/187 (48%)
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
+++++ L+ M+ P++V +N L + ++ + + + L ++MQ ++ TYN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
I+ C+ I A L + L E I S L++G C ++ A L + +G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
P+ +T+ +IHG + +A L M +G PN VT+ ++ G + +T +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 251 ELLHRMD 257
LL++M+
Sbjct: 246 NLLNKME 252
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A + D M + ++ + ++Y+T+I+G C G++D +LF S+ + G NVVTYNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+G C + ++E+ L +M G P TYNTL + +L EM+
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605
Query: 121 VAAETST 127
+ ST
Sbjct: 606 FVGDAST 612
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 96 LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
L +GL ++ +++ A+ LF M S +N + + K L ++ L+
Sbjct: 57 LRNGLHDM-KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
G+ Y+ LI+ C+ ++ A L + ++G P++VT + +++G+C+ ++ A
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
L M G P+ +TF TL+ G +N+ S+ V L+ RM +R
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 204 bits (518), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 139/230 (60%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L D MI+R + P+ F YS+LI+GFC+ +D A+ +F M C NVVTYNTLI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+CK K ++E + L+ EM +G+ VTY TL HG F+ ++A +F +M V
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYNT +DGLCKNG + +A +F L+ K E I Y+ +I+G+CK GK+E W+L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
F SL G+ P+V+ YN MI GFC G ++A LF M G P+ T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 140/256 (54%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+ASRLL MI+R + PN ++ LID F G++ A +L+ M ++ TY++LI
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+C ++E+ +++ M+SK P VVTYNTL +G + +++ ++LF EM +
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T TY T I G + A +F+ + I Y+ L+DGLCK GKLE A +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ L R + P + TYNIMI G C G+++ DLF + KGV P+ + +NT++ G R
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Query: 243 NNETSKVVELLHRMDE 258
+ L +M E
Sbjct: 553 KGLKEEADALFRKMRE 568
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 135/237 (56%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M+QRG +PN Y +++G C G+ID A L M+ NVV Y+T+I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ CK + +++LNL++EM +KG+RP V+TY++L L + A +L +M +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T+N ID K G +VEA +L+ + + I YS LI+G C +L+ A +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
F+ + PNVVTYN +I+GFC ++D+ +LF +M +G+ N VT+ TL+ G
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Score = 147 bits (371), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 136/259 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+D M++ G RP+ ++TLI G L + A L M GC N+VTY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++NG CK D++ + NL ++M + I VV Y+T+ L + + AL LF EM++
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V TY++ I LC +A+ L + K + ++ LID K GKL A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L+ + + + P++ TY+ +I+GFC ++D+A +F M +K PN VT+NTL+ G
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 241 IRNNETSKVVELLHRMDER 259
+ + VEL M +R
Sbjct: 411 CKAKRIDEGVELFREMSQR 429
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 126/250 (50%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M + G+ N + Y+ LI+ FC +I A L M G ++VT ++L+NGYC K
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
+ +++ L +M+ G RP +T+ TL HGLF ++ A+ L D M TY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
++GLCK G I A L + K E + YS +ID LCK + A LF + G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
+ PNV+TY+ +I CN + A L DM + + PN VTFN L+ ++ + +
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 251 ELLHRMDERN 260
+L M +R+
Sbjct: 351 KLYDEMIKRS 360
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D A + M+ GV PN Y+TL+DG C G++++A +F + + + TYN +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I G CK VE+ +L+ + KG++P V+ YNT+ G E A LF +M+
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 122 AAETST 127
++ T
Sbjct: 572 LPDSGT 577
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 91/200 (45%)
Query: 58 YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
Y ++ + +++++ L+ M+ P++ +N L + ++ + + + L ++MQ
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
++ TYN I+ C+ I A L + L E I S L++G C ++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
A L + +G P+ +T+ +IHG + +A L M +G PN VT+ ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 238 LGCIRNNETSKVVELLHRMD 257
G + + LL++M+
Sbjct: 233 NGLCKRGDIDLAFNLLNKME 252
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 155/254 (61%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L D MI+R + P+ F Y++LI+GFC+ +D+A+++F M C ++ TYNTLI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G+CK+K VE+ L+ EM +G+ VTY TL GLF ++A K+F +M V
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TY+ +DGLC NG + +A E+F ++ + +L I Y+ +I+G+CK GK++ W+L
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F SL G+ PNVVTYN MI G C+ + +A+ L M+ G P+ T+NTL+ +R
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Query: 243 NNETSKVVELLHRM 256
+ + + EL+ M
Sbjct: 513 DGDKAASAELIREM 526
Score = 164 bits (414), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 136/256 (53%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+AS+LL MI++ + PN ++ LID F G+ A +L M ++ TYN+LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+C ++++ ++ M+SK P + TYNTL G + +VE +LF EM H +
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+T TY T I GL +G A ++F+ + I YS L+DGLC GKLE A E+
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F + + + ++ Y MI G C G++D DLF + KGV PN VT+NT++ G
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 243 NNETSKVVELLHRMDE 258
+ LL +M E
Sbjct: 478 KRLLQEAYALLKKMKE 493
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 35/291 (12%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M+QRG +PN Y +++G C G+ID A L M+ +VV +NT+I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL-------------------------- 96
+ CK + V+++LNL+ EM +KGIRP VVTY++L
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 97 -----FHGLFEIHQVE----HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
F+ L + E A KL D+M + + TYN+ I+G C + + +A ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
F + C ++ Y+ LI G CK ++E ELF+ + GL+ + VTY +I G +
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
DG D A +F M + GV P+ +T++ L+ G N + K +E+ M +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 133/259 (51%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+D M++ G RP+ ++TLI G L + A L M GC N+VTY
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++NG CK D++ + NL ++M + I VV +NT+ L + V+ AL LF EM+
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY++ I LC G +A++L + K + ++ LID K GK A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L + + + P++ TYN +I+GFC ++DKA +F M +K P+ T+NTL+ G
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 241 IRNNETSKVVELLHRMDER 259
++ EL M R
Sbjct: 336 CKSKRVEDGTELFREMSHR 354
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 129/250 (51%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M + G+ N + Y+ LI+ FC +I A L M G ++VT ++L+NGYC K
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
+ +++ L +M+ G RP +T+ TL HGLF ++ A+ L D M TY
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
++GLCK G I A L + K E + ++ +ID LCK ++ A LF+ + G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
+ PNVVTY+ +I C+ G+ A L DM K + PN VTFN L+ ++ + +
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 251 ELLHRMDERN 260
+L M +R+
Sbjct: 276 KLHDDMIKRS 285
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 122/223 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A ++ + M+ + P+ Y+TLI GFC + ++ ELF M G + + VTY T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G D + + ++ +M+S G+ P ++TY+ L GL ++E AL++FD MQ S+
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + Y T I+G+CK G + + +LF +L + + + Y+ +I GLC L+ A+
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
L + + G +P+ TYN +I DG + +L +M +
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 129/257 (50%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A LL M++ G P+ S+L++G+C I A L M G + +T+ TLI+
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G E++ L M+ +G +P +VTY + +GL + ++ A L ++M+ + + A
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ +NT ID LCK ++ +A LF+ + + YS LI LC G+ A +L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ + PN+VT+N +I F +G+ +A L DM + + P+ T+N+L+ G +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 244 NETSKVVELLHRMDERN 260
+ K ++ M ++
Sbjct: 304 DRLDKAKQMFEFMVSKD 320
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A + D M + ++ + ++Y+T+I+G C G++D +LF S+ + G NVVTYNT
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+G C + ++E+ L +M G P TYNTL + +L EM+
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530
Query: 121 VAAETST 127
+ ST
Sbjct: 531 FVGDAST 537
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 148/256 (57%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA L MIQRG+ P+ Y++LIDGFC ++D+A + M GC N+ T+N
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LINGYCK +++ L L+ +M +G+ VTYNTL G E+ ++E A +LF EM
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V + +Y +DGLC NG +A E+F + K EL I Y+ +I G+C K++ AW
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+LF SLP G+ P+V TYNIMI G C G + +A LF ME G +PN T+N L+
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 241 IRNNETSKVVELLHRM 256
+ + +K +L+ +
Sbjct: 573 LGEGDATKSAKLIEEI 588
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 147/257 (57%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+ ++LL MI+R + P+ +S LID F G++ A EL M G + VTY +L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G+CK ++++ ++ M+SKG P + T+N L +G + + ++ L+LF +M V
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
A+T TYNT I G C+ G + A ELF+ + + I +Y L+DGLC G+ E A E
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
+F+ + + + ++ YNI+IHG CN ++D A DLF + KGV P+ T+N ++ G
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 242 RNNETSKVVELLHRMDE 258
+ S+ L +M+E
Sbjct: 539 KKGSLSEADLLFRKMEE 555
Score = 154 bits (390), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 137/255 (53%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A LL M +R ++ +A YS +IDG C G +D A LF M+I G +++ Y TLI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G+C ++ L +M+ + I P VV ++ L + ++ A +L EM ++
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+T TY + IDG CK + +A + + C I ++ LI+G CK ++ ELF
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ + G++ + VTYN +I GFC G+++ A +LF +M ++ V P+ V++ L+ G N
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 244 NETSKVVELLHRMDE 258
E K +E+ ++++
Sbjct: 471 GEPEKALEIFEKIEK 485
Score = 154 bits (389), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 133/232 (57%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A+ +LDLM+ +G PN ++ LI+G+C ID ELF M + G + + VTYNT
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G+C+ +E + L+ EM+S+ +RP +V+Y L GL + + E AL++F++++ S
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + YN I G+C + +A +LF +L + + ++ Y+ +I GLCK G L A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
LF+ + G PN TYNI+I +G K+ L +++ G + + T
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 132/260 (50%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA L+D M++ G +P + L++G CL G++ A L M G N VTY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++ CK+ ++ L +M + I+ V Y+ + GL + +++A LF+EM+
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
A+ Y T I G C G + A+L R + K + A+S LID K GKL A
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
EL + + + G+ P+ VTY +I GFC + Q+DKA+ + M +KG PN TFN L+ G
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 241 IRNNETSKVVELLHRMDERN 260
+ N +EL +M R
Sbjct: 398 CKANLIDDGLELFRKMSLRG 417
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 125/259 (48%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+D M++ G +PN Y ++ C +G+ A EL M+ + V Y+
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+G CK ++ + NL++EM KG + ++ Y TL G + + KL +M
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + ++ ID K G + EA EL + + Y+ LIDG CK +L+ A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+ + G PN+ T+NI+I+G+C +D +LF M +GV + VT+NTL+ G
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 241 IRNNETSKVVELLHRMDER 259
+ EL M R
Sbjct: 433 CELGKLEVAKELFQEMVSR 451
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 3/257 (1%)
Query: 7 LLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
+LDL Q +G+ N + S +I+ C ++ A + G + VT++TLIN
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G C V E+L L M+ G +PT++T N L +GL +V A+ L D M +
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
TY + +CK+G A EL R + K +L YS +IDGLCK G L+ A+ LF
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ G +++ Y +I GFC G+ D L DM + + P+ V F+ L+ ++
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330
Query: 244 NETSKVVELLHRMDERN 260
+ + EL M +R
Sbjct: 331 GKLREAEELHKEMIQRG 347
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 35/170 (20%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE------------------------- 35
++ A L M+ R VRP+ Y L+DG C GE
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 36 ----------IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
+D A +LF S+ + G +V TYN +I G CK + E+ L+ +M G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 86 IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
P TYN L + KL +E++ + + ST +D L
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
K + A +LFQ + R P ++ ++ + Q D DL ME KG+A N T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 235 TLMLGCIRNNETS 247
++ C R + S
Sbjct: 112 IMINCCCRCRKLS 124
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 146/256 (57%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA L MI RG+ P+ Y++LIDGFC +D+A ++ M GC N+ T+N
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LINGYCK +++ L L+ +M +G+ VTYNTL G E+ ++ A +LF EM
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V TY +DGLC NG +A E+F + K EL I Y+ +I G+C K++ AW
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+LF SLP G+ P V TYNIMI G C G + +A LF ME G AP+ T+N L+
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 241 IRNNETSKVVELLHRM 256
+ + + +K V+L+ +
Sbjct: 589 LGDGDATKSVKLIEEL 604
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 145/257 (56%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+ ++LL MI+R + PN +S LID F G++ A EL M G + +TY +L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G+CK ++++ + M+SKG P + T+N L +G + ++++ L+LF +M V
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
A+T TYNT I G C+ G + A ELF+ + K I Y L+DGLC G+ E A E
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
+F+ + + + ++ YNI+IHG CN ++D A DLF + KGV P T+N ++ G
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 242 RNNETSKVVELLHRMDE 258
+ S+ L +M+E
Sbjct: 555 KKGPLSEAELLFRKMEE 571
Score = 174 bits (440), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 145/255 (56%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A LL M +R ++ +A YS +IDG C G +D A LF M++ G N++TYN LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G+C ++ L +M+ + I P VVT++ L + ++ A +L EM H +A
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+T TY + IDG CK ++ +A ++ + C+ I ++ LI+G CK +++ ELF
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ + G++ + VTYN +I GFC G+++ A +LF +M ++ V PN VT+ L+ G N
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 244 NETSKVVELLHRMDE 258
E+ K +E+ ++++
Sbjct: 487 GESEKALEIFEKIEK 501
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 135/237 (56%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A++++DLM+ +G PN ++ LI+G+C ID ELF M + G + + VTYNT
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G+C+ + + L+ EM+S+ + P +VTY L GL + + E AL++F++++ S
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + YN I G+C + +A +LF +L + + G++ Y+ +I GLCK G L A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
LF+ + G P+ TYNI+I DG K+ L +++ G + + T ++
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 133/259 (51%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA L+D M++ G +P+ +TL++G CL+G+ A L M GC N VTY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++N CK+ ++ L +M + I+ V Y+ + GL + +++A LF+EM+
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TYN I G C G + A+L R + K + +S LID K GKL A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
EL + + G+ P+ +TY +I GFC + +DKA+ + M +KG PN TFN L+ G
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 241 IRNNETSKVVELLHRMDER 259
+ N +EL +M R
Sbjct: 414 CKANRIDDGLELFRKMSLR 432
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 135/246 (54%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
+I+ G PN +STLI+G CL G + A EL M G +++T NTL+NG C +
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
E++ L +M+ G +P VTY + + + + Q A++L +M+ ++ + Y+
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
IDGLCK+G + A LF + + I Y+ LI G C G+ + +L + + +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
+ PNVVT++++I F +G++ +A +L +M +G+AP+ +T+ +L+ G + N K
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 251 ELLHRM 256
+++ M
Sbjct: 389 QMVDLM 394
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 14 RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM------HNVVTYNTLINGYCK 67
+G+ N + S +I+ FC R R+L ++ G + N +T++TLING C
Sbjct: 117 KGIAHNLYTLSIMINCFC------RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 170
Query: 68 TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
V E+L L M+ G +P ++T NTL +GL + A+ L D+M T
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
Y ++ +CK+G A EL R + +L YS +IDGLCK G L+ A+ LF +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
G+ N++TYNI+I GFCN G+ D L DM + + PN VTF+ L+ ++ +
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 248 KVVELLHRMDER 259
+ EL M R
Sbjct: 351 EAEELHKEMIHR 362
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M++ G +PNA Y +++ C +G+ A EL M+ + V Y+ +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G CK ++ + NL++EM KGI ++TYN L G + + KL +M +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T++ ID K G + EA EL + + Y+ LIDG CK L+ A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ G PN+ T+NI+I+G+C ++D +LF M +GV + VT+NTL+ G
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 243 NNETSKVVELLHRMDERN 260
+ + EL M R
Sbjct: 451 LGKLNVAKELFQEMVSRK 468
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 97/190 (51%)
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
+++++L+ +M+ PTV+ ++ LF + + Q + L L +M+ +A T +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
I+ C+ + A + L E +S LI+GLC G++ A EL + +G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
P+++T N +++G C G+ +A L M G PN VT+ ++ ++ +T+ +
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 251 ELLHRMDERN 260
ELL +M+ERN
Sbjct: 249 ELLRKMEERN 258
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 35/170 (20%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE------------------------- 35
++ A L M+ R V PN Y L+DG C GE
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 36 ----------IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG 85
+D A +LF S+ + G V TYN +I G CK + E+ L+ +M G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 86 IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGL 135
P TYN L ++KL +E++ + + ST ID L
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 34.3 bits (77), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 53/146 (36%), Gaps = 44/146 (30%)
Query: 156 CELGIEAYS--------CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
CE G A+S L GL I K + A +LF+ + +P V+ ++ +
Sbjct: 42 CERGFSAFSDRNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAK 100
Query: 208 DGQMDKAHDLFLDMEAKGVA-----------------------------------PNCVT 232
Q D L ME KG+A PN +T
Sbjct: 101 TKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160
Query: 233 FNTLMLGCIRNNETSKVVELLHRMDE 258
F+TL+ G S+ +EL+ RM E
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVE 186
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 197 bits (501), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 150/256 (58%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA+ L MI RG+ PN Y+TL+DG+C+ + A + M N C ++VT+ +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI GYC K V++ + ++ + +G+ VTY+ L G + +++ A +LF EM
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V + TY +DGLC NG + +A E+F L+ K +LGI Y+ +I+G+CK GK+E AW
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
LF SLP G+ PNV+TY +MI G C G + +A+ L ME G APN T+NTL+
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 241 IRNNETSKVVELLHRM 256
+R+ + + +L+ M
Sbjct: 554 LRDGDLTASAKLIEEM 569
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 139/252 (55%)
Query: 7 LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
LL M +R V+ + F YST+ID C G ID A LF M+ G +VVTYN+L+ G C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 67 KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
K + L +M+S+ I P V+T+N L + +++ A +L+ EM ++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
TYNT +DG C + EA + + KC I ++ LI G C + +++ ++F+++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
+ GL+ N VTY+I++ GFC G++ A +LF +M + GV P+ +T+ L+ G N +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 247 SKVVELLHRMDE 258
K +E+ + +
Sbjct: 455 EKALEIFEDLQK 466
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 137/257 (53%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
++ + LL M+ R + PN ++ L+D F G++ A EL+ M G N++TYNTL
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
++GYC + E+ N+ M+ P +VT+ +L G + +V+ +K+F + +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
A TY+ + G C++G I A ELF+ + + Y L+DGLC GKLE A E
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
+F+ L + + +V Y +I G C G+++ A +LF + KGV PN +T+ ++ G
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 242 RNNETSKVVELLHRMDE 258
+ S+ LL +M+E
Sbjct: 520 KKGSLSEANILLRKMEE 536
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 129/229 (56%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA+ +LDLM++ P+ +++LI G+C+ +D ++F ++ G + N VTY+
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+ G+C++ ++ + L+ EM+S G+ P V+TY L GL + ++E AL++F+++Q S
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ Y T I+G+CK G + +A LF +L + + Y+ +I GLCK G L A
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
L + + G PN TYN +I DG + + L +M++ G + +
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 132/236 (55%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A +L +++ G P+ ++TLI G L G++ A L M NGC +VVTYN+++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G C++ D +L+L +M + ++ V TY+T+ L ++ A+ LF EM+ + +
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
TYN+ + GLCK G + A L + + + + ++ L+D K GKL+ A EL+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+ + G+ PN++TYN ++ G+C ++ +A+++ M +P+ VTF +L+ G
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Score = 137 bits (344), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 137/244 (56%), Gaps = 3/244 (1%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ N + + +I+ FC + A + + G + T+NTLI G V E+
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
+ L M+ G +P VVTYN++ +G+ AL L +M+ +V A+ TY+T ID
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LC++G I A LF+ + + + Y+ L+ GLCK GK L + + ++PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVE 251
V+T+N+++ F +G++ +A++L+ +M +G++PN +T+NTLM G C++N +E + +++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 252 LLHR 255
L+ R
Sbjct: 358 LMVR 361
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+A L MI+ P+ +S T + + + +++NG HN+ T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
IN +C+ + ++ +++ G P T+NTL GLF +V A+ L D M +
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+ TYN+ ++G+C++G A +L R + + + YS +ID LC+ G ++ A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
LF+ + G+ +VVTYN ++ G C G+ + L DM ++ + PN +TFN L+ +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 242 RNNETSKVVELLHRMDER 259
+ + + EL M R
Sbjct: 310 KEGKLQEANELYKEMITR 327
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A L M+ GV P+ Y L+DG C G++++A E+F + + +V Y T+I
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G CK VE++ NL+ + KG++P V+TY + GL + + A L +M+ A
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
TYNT I ++G + +A+L ++ C +A S
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMK--SCGFSADASS 580
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 96 LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
L G+ +I + + A+ LF EM S ++ F + + + + L +
Sbjct: 60 LRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118
Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
I + +I+ C+ K A+ + + ++G P+ T+N +I G +G++ +A
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
L M G P+ VT+N+++ G R+ +TS ++LL +M+ERN
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 194 bits (492), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 145/254 (57%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L + MI RG+ P+ Y++LIDGFC + A ++F M GC ++VTY+ LI
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
N YCK K V++ + L+ E+ SKG+ P +TYNTL G + ++ A +LF EM V
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TY +DGLC NG + +A E+F ++ + LGI Y+ +I G+C K++ AW L
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F SL G+ P+VVTYN+MI G C G + +A LF M+ G P+ T+N L+ +
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572
Query: 243 NNETSKVVELLHRM 256
+ VEL+ M
Sbjct: 573 GSGLISSVELIEEM 586
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 140/248 (56%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M +R ++ + YS +ID C G D A LF M++ G +VVTY++LI G C
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
++ + EM+ + I P VVT++ L + ++ A +L++EM +A +T TYN+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
IDG CK + EA ++F + CE I YS LI+ CK +++ LF+ + G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
L+PN +TYN ++ GFC G+++ A +LF +M ++GV P+ VT+ L+ G N E +K +
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 251 ELLHRMDE 258
E+ +M +
Sbjct: 476 EIFEKMQK 483
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 143/257 (55%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+ +++L MI R + P+ +S LID F G++ A+EL+ M G + +TYN+L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G+CK + E+ ++ M+SKG P +VTY+ L + + +V+ ++LF E+ +
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
T TYNT + G C++G + A ELF+ + + Y L+DGLC G+L A E
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
+F+ + + + + YNI+IHG CN ++D A LF + KGV P+ VT+N ++ G
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 242 RNNETSKVVELLHRMDE 258
+ S+ L +M E
Sbjct: 537 KKGSLSEADMLFRKMKE 553
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 141/259 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA L+D M++ G +P+ Y +++ C +G A +LF M+ +VV Y+
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+ CK +++L+L++EM KGI+ VVTY++L GL + + K+ EM +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + T++ ID K G ++EA EL+ + Y+ LIDG CK L A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
++F + G P++VTY+I+I+ +C ++D LF ++ +KG+ PN +T+NTL+LG
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 241 IRNNETSKVVELLHRMDER 259
++ + + EL M R
Sbjct: 431 CQSGKLNAAKELFQEMVSR 449
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 126/235 (53%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA+++ DLM+ +G P+ YS LI+ +C +D LF + G + N +TYNTL+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G+C++ + + L+ EM+S+G+ P+VVTY L GL + ++ AL++F++MQ S +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
YN I G+C + +A LF +L + + Y+ +I GLCK G L A L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
F+ + G P+ TYNI+I + + +L +M+ G + + T ++
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 126/230 (54%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G P+ +STL++GFCL G + A L M ++VT +TLING C V E+
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
L L M+ G +P VTY + + L + AL LF +M+ ++ A Y+ ID
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LCK+G +A LF + + + + YS LI GLC GK + ++ + + ++P+
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNN 244
VVT++ +I F +G++ +A +L+ +M +G+AP+ +T+N+L+ G + N
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 12/251 (4%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCM------HNVVTYNTLINGYCKT 68
G+ + + + +I+ +C R ++L + + G + +T++TL+NG+C
Sbjct: 100 GIEHDMYTMTIMINCYC------RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153
Query: 69 KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
V E++ L M+ RP +VT +TL +GL +V AL L D M + TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
++ LCK+G A +LFR + + + YS +ID LCK G + A LF +
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
G+ +VVTY+ +I G CNDG+ D + +M + + P+ VTF+ L+ ++ + +
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 249 VVELLHRMDER 259
EL + M R
Sbjct: 334 AKELYNEMITR 344
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A L + MIQ P ++ L T + D M++NG H++ T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+IN YC+ K + + ++ G P +T++TL +G +V A+ L D M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ T +T I+GLC G + EA L + + Y +++ LCK G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+LF+ + + +VV Y+I+I C DG D A LF +ME KG+ + VT+++L+ G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 241 IRNNETSKVVELLHRMDERN 260
+ + ++L M RN
Sbjct: 291 CNDGKWDDGAKMLREMIGRN 310
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++ A L M+ RGV P+ Y L+DG C GE+++A E+F M + + YN
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+G C V+++ +L+ + KG++P VVTYN + GL + + A LF +M+
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
+ TYN I ++ + EL ++V
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 150/254 (59%), Gaps = 3/254 (1%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L + MIQR + P+ Y+ LI+GFC+ +D A+++F M C+ N+ TYNTLI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+CK K VE+ + L+ EM +G+ VTY T+ G F+ + A +F +M + V
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TY+ + GLC G + A +F+ L+ + EL I Y+ +I+G+CK GK+ AW+L
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F SL + P+VVTYN MI G C+ + +A DLF M+ G PN T+NTL+ +R
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Query: 243 NNETSKVVELLHRM 256
+ + + EL+ M
Sbjct: 583 DCDRAASAELIKEM 596
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 134/237 (56%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M+QRG +P+ Y T+++G C G+ID A L M+ NVV +NT+I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ CK + VE +++L++EM +KGIRP VVTYN+L + L + A +L M +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T+N ID K G +VEA +L + + Y+ LI+G C +L+ A ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
F+ + +PN+ TYN +I+GFC +++ +LF +M +G+ N VT+ T++ G
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 141/259 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+D M++ G +P+ F ++TLI G L + A L M GC ++VTY T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++NG CK D++ +LNL ++M + I+ VV +NT+ L + VE A+ LF EM+
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TYN+ I+ LC G +A+ L + K + ++ LID K GKL A
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L + + + + P+ +TYN++I+GFC ++D+A +F M +K PN T+NTL+ G
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 241 IRNNETSKVVELLHRMDER 259
+ VEL M +R
Sbjct: 409 CKCKRVEDGVELFREMSQR 427
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 129/246 (52%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ + + YS I+ FC ++ A + M G ++VT ++L+NGYC +K + ++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
+ L +M+ G +P T+ TL HGLF ++ A+ L D+M + TY T ++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LCK G I A L + + + + ++ +ID LCK +E A +LF + G+ PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
VVTYN +I+ CN G+ A L +M K + PN VTFN L+ + + + +L
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 255 RMDERN 260
M +R+
Sbjct: 353 EMIQRS 358
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 132/257 (51%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A +L M++ G P+ S+L++G+C + I A L M G + T+ TLI+
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G E++ L +M+ +G +P +VTY T+ +GL + ++ AL L ++M+ + + A
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+NT ID LCK ++ A +LF + + Y+ LI+ LC G+ A L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
++ + PNVVT+N +I F +G++ +A L +M + + P+ +T+N L+ G +
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 244 NETSKVVELLHRMDERN 260
N + ++ M ++
Sbjct: 377 NRLDEAKQMFKFMVSKD 393
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 2/260 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A L M++ P+ ++ L+ + + L M G H++ TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
IN +C+ + +L + ++M+ G P +VT ++L +G ++ A+ L D+M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+T T+ T I GL + EA L + C+ + Y +++GLCK G ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + NVV +N +I C ++ A DLF +ME KG+ PN VT+N+L + C
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL-INC 302
Query: 241 IRN-NETSKVVELLHRMDER 259
+ N S LL M E+
Sbjct: 303 LCNYGRWSDASRLLSNMLEK 322
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 39 ARELFVSMDINGCMH--NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTL 96
A+ LFV ++ G + V ++ L C + + Y E+L
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR------------- 55
Query: 97 FHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKC 156
+ L +I +V+ A+ LF +M S +N + + K L ++ L
Sbjct: 56 -NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
+ YS I+ C+ +L A + + ++G P++VT + +++G+C+ ++ A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
L M G P+ TF TL+ G +N+ S+ V L+ +M +R
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 148/255 (58%), Gaps = 1/255 (0%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNTL 61
+ASRLL M+++ + P+ ++ LID F G++ A +L+ M C +VV YNTL
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I G+CK K VEE + ++ EM +G+ VTY TL HG F+ ++A +F +M V
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+ TYN +DGLC NG + A +F ++ +L I Y+ +I+ LCK GK+E W+
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
LF SL G+ PNVVTY M+ GFC G ++A LF++M+ G PN T+NTL+ +
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Query: 242 RNNETSKVVELLHRM 256
R+ + + EL+ M
Sbjct: 543 RDGDEAASAELIKEM 557
Score = 157 bits (396), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 139/259 (53%), Gaps = 1/259 (0%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L++ M+ +G +P+ Y +I+G C GE D A L M+ +VV YNT+I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G CK K ++++ +L+++M +KGI+P V TYN L L + A +L +M ++
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELF-RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+ +N ID K G +VEA +L+ ++ C + AY+ LI G CK ++E E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
+F+ + + GL+ N VTY +IHGF D A +F M + GV P+ +T+N L+ G
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 242 RNNETSKVVELLHRMDERN 260
N + + M +R+
Sbjct: 438 NNGNVETALVVFEYMQKRD 456
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 125/232 (53%), Gaps = 1/232 (0%)
Query: 3 EASRLLDLMIQ-RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
EA +L D M++ + P+ Y+TLI GFC ++ E+F M G + N VTY TL
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G+ + +D + + ++ +M+S G+ P ++TYN L GL VE AL +F+ MQ D+
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+ TY T I+ LCK G + + +LF +L + + + Y+ ++ G C+ G E A
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
LF + G +PN TYN +I DG + +L +M + G A + TF
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M G+ N + YS I+ FC ++ A + M G ++VT N+L+NG+C
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
+ E++ L +M+ G +P VT+ TL HGLF+ ++ A+ L + M + TY
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
I+GLCK G A L + K E + Y+ +IDGLCK ++ A++LF + G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
+ P+V TYN +I CN G+ A L DM K + P+ V FN L+ ++ + +
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 251 ELLHRM 256
+L M
Sbjct: 341 KLYDEM 346
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 2/261 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A L M++ P+ +S L+ + D L M G HN+ TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
IN +C+ + +L + +M+ G P++VT N+L +G +++ A+ L D+M
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+T T+ T + GL ++ EA L + V C+ + Y +I+GLCK G+ + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + + +VV YN +I G C MD A DLF ME KG+ P+ T+N L + C
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL-ISC 294
Query: 241 IRN-NETSKVVELLHRMDERN 260
+ N S LL M E+N
Sbjct: 295 LCNYGRWSDASRLLSDMLEKN 315
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 1/257 (0%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A +L M++ G P+ ++L++GFC I A L M G + VT+ TL++
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G + E++ L M+ KG +P +VTY + +GL + + + AL L ++M+ + A
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ YNT IDGLCK ++ +A +LF + + + Y+ LI LC G+ A L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGCIR 242
+ + P++V +N +I F +G++ +A L+ +M ++K P+ V +NTL+ G +
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 243 NNETSKVVELLHRMDER 259
+ +E+ M +R
Sbjct: 369 YKRVEEGMEVFREMSQR 385
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 4/221 (1%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++E + M QRG+ N Y+TLI GF + D A+ +F M +G +++TYN
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L++G C +VE +L ++ M + ++ +VTY T+ L + +VE LF +
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V TY T + G C+ G EA LF ++ Y+ LI + G +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
EL + + G + T+ ++ +DG++DK+ FLDM
Sbjct: 552 ELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKS---FLDM 588
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 190 bits (482), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 138/227 (60%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L ++MIQ V P+ F Y +LI+G C+ G +D AR++F M+ NGC N V Y TLI
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G+CK+K VE+ + ++ EM KG+ +TY L G + + + A ++F++M
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TYN +DGLC NG + +A +F +R + ++ I Y+ +I G+CK+GK+E A++L
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
F SL G+ PNV+TY MI GFC G + +A LF M+ G PN
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 135/256 (52%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A+ LL M++R + PN ++ LID F G++ A+EL+ M +V TY +LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG C ++E+ ++ M G P V Y TL HG + +VE +K+F EM V
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
A T TY I G C G A E+F + + I Y+ L+DGLC GK+E A +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ + + + N+VTY I+I G C G+++ A DLF + +KG+ PN +T+ T++ G R
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 243 NNETSKVVELLHRMDE 258
+ L +M E
Sbjct: 481 RGLIHEADSLFKKMKE 496
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 130/257 (50%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
AS L M++ G P+ +++L++G+C I+ A LF + G NVVTY TLI
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
CK + + ++ L+++M + G RP VVTYN L GL EI + A L +M +
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T+ ID K G ++EA EL+ + + + Y LI+GLC G L+ A ++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F + R G PN V Y +IHGFC +++ +F +M KGV N +T+ L+ G
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 243 NNETSKVVELLHRMDER 259
E+ ++M R
Sbjct: 376 VGRPDVAQEVFNQMSSR 392
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 135/259 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A L D ++ G +PN Y+TLI C ++ A ELF M NG NVVTYN
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+ G C+ ++ L +M+ + I P V+T+ L ++ ++ A +L++ M
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V + TY + I+GLC G + EA ++F + C Y+ LI G CK ++E
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
++F + + G++ N +TY ++I G+C G+ D A ++F M ++ P+ T+N L+ G
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 241 IRNNETSKVVELLHRMDER 259
N + K + + M +R
Sbjct: 409 CCNGKVEKALMIFEYMRKR 427
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 135/258 (52%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D L + M G+ P + ++ CL+ + RA M G ++VT+ +L
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
+NGYC +E+++ L+ ++L G +P VVTY TL L + + HA++LF++M +
Sbjct: 160 LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
TYN + GLC+ G +AA L R + + E + ++ LID K+GKL A E
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE 279
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
L+ + ++ + P+V TY +I+G C G +D+A +F ME G PN V + TL+ G
Sbjct: 280 LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC 339
Query: 242 RNNETSKVVELLHRMDER 259
++ +++ + M ++
Sbjct: 340 KSKRVEDGMKIFYEMSQK 357
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA ++ LM + G PN +Y+TLI GFC + ++ ++F M G + N +TY
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI GYC + + ++++M S+ P + TYN L GL +VE AL +F+ M+ +
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY I G+CK G + +A +LF +L + + Y+ +I G C+ G + A
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488
Query: 181 ELFQSLPRVGLMPNVVTYN 199
LF+ + G +PN Y
Sbjct: 489 SLFKKMKEDGFLPNESVYK 507
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%)
Query: 73 ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
++L+L++ M+ P+++ + L + ++++ + + LF++MQ + T N +
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
+C + A+ + L E + ++ L++G C ++E A LF + +G
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
PNVVTY +I C + ++ A +LF M G PN VT+N L+ G L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 253 LHRMDER 259
L M +R
Sbjct: 246 LRDMMKR 252
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 145/254 (57%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +LL M+QRG+ PN Y++LIDGFC ++ A ++ M GC +++T+N LI
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NGYCK +++ L L+ EM +G+ VTYNTL G + ++E A KLF EM V
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ +Y +DGLC NG + +A E+F + K EL I Y +I G+C K++ AW+L
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F SLP G+ + YNIMI C + KA LF M +G AP+ +T+N L+ +
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Query: 243 NNETSKVVELLHRM 256
+++ + EL+ M
Sbjct: 591 DDDATTAAELIEEM 604
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 146/257 (56%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+ ++LL MI+R + PN +S LID F G++ A +L M G N +TYN+L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G+CK +EE++ + M+SKG P ++T+N L +G + ++++ L+LF EM V
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
A T TYNT + G C++G + A +LF+ + + I +Y L+DGLC G+LE A E
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
+F + + + ++ Y I+IHG CN ++D A DLF + KGV + +N ++
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 242 RNNETSKVVELLHRMDE 258
R + SK L +M E
Sbjct: 555 RKDSLSKADILFRKMTE 571
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 142/255 (55%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A LL M +R ++ +A YS +IDG C G +D A LF M+I G +++TYNTLI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G+C ++ L +M+ + I P VVT++ L + ++ A +L EM +A
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
T TYN+ IDG CK + EA ++ + C+ I ++ LI+G CK +++ ELF
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ + G++ N VTYN ++ GFC G+++ A LF +M ++ V P+ V++ L+ G N
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 244 NETSKVVELLHRMDE 258
E K +E+ ++++
Sbjct: 487 GELEKALEIFGKIEK 501
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 133/237 (56%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA +++DLMI +G P+ ++ LI+G+C ID ELF M + G + N VTYNT
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+ G+C++ +E + L+ EM+S+ +RP +V+Y L GL + ++E AL++F +++ S
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + Y I G+C + +A +LF +L + +L AY+ +I LC+ L A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
LF+ + G P+ +TYNI+I D A +L +M++ G + T ++
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 134/257 (52%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M++ G +P +TL++G CL G++ A L M G N VTY ++
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
N CK+ ++ L +M + I+ V Y+ + GL + +++A LF+EM+
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
A+ TYNT I G C G + A+L R + K + +S LID K GKL A +L
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ + + G+ PN +TYN +I GFC + ++++A + M +KG P+ +TFN L+ G +
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 243 NNETSKVVELLHRMDER 259
N +EL M R
Sbjct: 416 ANRIDDGLELFREMSLR 432
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 134/257 (52%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A L+D M++ G +PN Y +++ C +G+ A EL M+ + V Y+ +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G CK ++ + NL++EM KG + ++TYNTL G + + KL +M ++
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T++ ID K G + EA +L + + Y+ LIDG CK +LE A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ G P+++T+NI+I+G+C ++D +LF +M +GV N VT+NTL+ G +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 243 NNETSKVVELLHRMDER 259
+ + +L M R
Sbjct: 451 SGKLEVAKKLFQEMVSR 467
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 135/246 (54%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
+++ G P+ +++TL++G CL + A EL M G ++T NTL+NG C
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
V +++ L M+ G +P VTY + + + + Q A++L +M+ ++ + Y+
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
IDGLCK+G + A LF + + + I Y+ LI G C G+ + +L + + +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
+ PNVVT++++I F +G++ +A L +M +G+APN +T+N+L+ G + N + +
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 251 ELLHRM 256
+++ M
Sbjct: 389 QMVDLM 394
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 128/249 (51%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M +G+ + + S +I+ FC ++ A + G + V +NTL+NG C
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
V E+L L M+ G +PT++T NTL +GL +V A+ L D M + TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
++ +CK+G A EL R + +L YS +IDGLCK G L+ A+ LF + G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
+++TYN +I GFCN G+ D L DM + ++PN VTF+ L+ ++ + +
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 251 ELLHRMDER 259
+LL M +R
Sbjct: 354 QLLKEMMQR 362
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 53 HNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL 112
N+ + L +G K +++++L+ +M+ PTV+ +N LF + + Q E L L
Sbjct: 52 RNLSYRDKLSSGLVGIK-ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLAL 110
Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
+M+ +A T + I+ C+ + A + L E ++ L++GLC
Sbjct: 111 CKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCL 170
Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
++ A EL + +G P ++T N +++G C +G++ A L M G PN VT
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230
Query: 233 FNTLMLGCIRNNETSKVVELLHRMDERN 260
+ ++ ++ +T+ +ELL +M+ERN
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERN 258
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 53/146 (36%), Gaps = 44/146 (30%)
Query: 156 CELGIEAYS--------CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
CE G +S L GL I K + A +LF+ + + +P V+ +N +
Sbjct: 42 CERGFSTFSDRNLSYRDKLSSGLVGI-KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAK 100
Query: 208 DGQMDKAHDLFLDMEAKGVA-----------------------------------PNCVT 232
Q + L ME+KG+A P+ V
Sbjct: 101 TKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160
Query: 233 FNTLMLGCIRNNETSKVVELLHRMDE 258
FNTL+ G S+ +EL+ RM E
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVE 186
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 147/254 (57%), Gaps = 4/254 (1%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L D M+ R + P+ Y+++I GFC D A+ +F M +VVT+NT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 439
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ YC+ K V+E + L E+ +G+ TYNTL HG E+ + A LF EM V
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+T T N + G C+N + EA ELF +++ K +L AY+ +I G+CK K++ AW+L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F SLP G+ P+V TYN+MI GFC + A+ LF M+ G P+ T+NTL+ GC++
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 243 NNETSKVVELLHRM 256
E K +EL+ M
Sbjct: 620 AGEIDKSIELISEM 633
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 4/231 (1%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+A + DLM P+ ++T+ID +C +D +L + G + N TYNTL
Sbjct: 418 DDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G+C+ ++ + +L+ EM+S G+ P +T N L +G E ++E AL+LF+ +Q S +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+T YN I G+CK + EA +LF +L + E ++ Y+ +I G C + A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVT 232
LF + G P+ TYN +I G G++DK+ +L +M + G + + T
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 129/257 (50%), Gaps = 4/257 (1%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L D M++ G+ P ++TLI+G CL G + A L M G +VVTY T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG CK D + +LNL S+M I+P VV Y+ + L + A LF EM +A
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYN IDG C G +A L R + + + ++ LI K GKL A +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ + P+ VTYN MI+GFC + D A +F D+ A +P+ VTFNT++ R
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCR 444
Query: 243 NNETSKVVELLHRMDER 259
+ ++LL + R
Sbjct: 445 AKRVDEGMQLLREISRR 461
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 39/291 (13%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A L M+++G+ PN F Y+ +IDGFC G A+ L M +V+T+N LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ K + E+ L EML + I P VTYN++ +G + ++ + A +FD M DV
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T+NT ID C+ + E +L R + Y+ LI G C++ L A +L
Sbjct: 434 ----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 183 FQSLPRVGLMPNVVT-----------------------------------YNIMIHGFCN 207
FQ + G+ P+ +T YNI+IHG C
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
++D+A DLF + GV P+ T+N ++ G + S L H+M +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 15/274 (5%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A D M++ A + +I F D A L+ M+I N+ ++N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL---------- 110
LI +C + SL+ + ++ G +P VVT+NTL HGL ++ AL
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 111 -----KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
LFD+M + T+NT I+GLC G ++EAA L + + + Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
+++G+CK+G ++A L + + P+VV Y+ +I C DG A LF +M KG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 226 VAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
+APN T+N ++ G S LL M ER
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 131/273 (47%), Gaps = 19/273 (6%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D A L M R + N + ++ LI FC ++ + F + G +VVT+NTL
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 62 INGYCKTKDVEESLNLYS---------------EMLSKGIRPTVVTYNTLFHGLFEIHQV 106
++G C + E+L L+ +M+ G+ P V+T+NTL +GL +V
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCL 166
A L ++M + + TY T ++G+CK G A L + + + YS +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 167 IDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
ID LCK G A LF + G+ PNV TYN MI GFC+ G+ A L DM + +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 227 APNCVTFNTLMLGCIRNN---ETSKVV-ELLHR 255
P+ +TFN L+ ++ E K+ E+LHR
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DE +LL + +RG+ N Y+TLI GFC ++ A++LF M +G + +T N
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+ G+C+ + +EE+L L+ + I V YN + HG+ + +V+ A LF +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V + TYN I G C I +A LF ++ E Y+ LI G K G+++ +
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
EL + G + T M+ DG++DK+ F DM
Sbjct: 628 ELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 664
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 187 bits (476), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 137/232 (59%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L + M++ + P+ YS+LI+G CL ID A ++F M GC+ +VV+YNTLI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+CK K VE+ + L+ EM +G+ VTYNTL G F+ V+ A + F +M ++
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TYN + GLC NG + +A +F ++ + +L I Y+ +I G+CK GK+E AW L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
F SL GL P++VTY M+ G C G + + L+ M+ +G+ N T +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 171 bits (434), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 144/259 (55%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+D M++ G +P+ Y+ +ID C T ++ A + F ++ G NVVTY
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+NG C + ++ L S+M+ K I P V+TY+ L + +V A +LF+EM
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TY++ I+GLC + I EA ++F + C + +Y+ LI+G CK ++E
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+LF+ + + GL+ N VTYN +I GF G +DKA + F M+ G++P+ T+N L+ G
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 241 IRNNETSKVVELLHRMDER 259
N E K + + M +R
Sbjct: 411 CDNGELEKALVIFEDMQKR 429
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 136/237 (57%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A+RLL MI++ + PN YS L+D F G++ A+ELF M ++VTY++LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG C ++E+ ++ M+SKG VV+YNTL +G + +VE +KLF EM +
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ T TYNT I G + G + +A E F + I Y+ L+ GLC G+LE A +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
F+ + + + ++VTY +I G C G++++A LF + KG+ P+ VT+ T+M G
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 160 bits (405), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 135/254 (53%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A +L M++ G P+ +L++GFC + A L M G ++V YN +I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
CKTK V ++ + + E+ KGIRP VVTY L +GL + A +L +M +
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
TY+ +D KNG ++EA ELF + + + I YS LI+GLC +++ A ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ G + +VV+YN +I+GFC +++ LF +M +G+ N VT+NTL+ G +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 244 NETSKVVELLHRMD 257
+ K E +MD
Sbjct: 379 GDVDKAQEFFSQMD 392
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 126/229 (55%), Gaps = 8/229 (3%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA+++ DLM+ +G + Y+TLI+GFC ++ +LF M G + N VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G+ + DV+++ +S+M GI P + TYN L GL + ++E AL +F++MQ +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TY T I G+CK G + EA LF +L + + I Y+ ++ GLC G L
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
L+ + + GLM N T +DG + + +L M + G AP+
Sbjct: 491 ALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCGYAPS 531
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 130/256 (50%), Gaps = 3/256 (1%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A L M++ P+ ++ L+ + D L M++ G +++ T+N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+IN +C V +L++ +ML G P VT +L +G ++V A+ L D+M
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ YN ID LCK + +A + F+ + + Y+ L++GLC + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
L + + + PNV+TY+ ++ F +G++ +A +LF +M + P+ VT+++L+ G
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 240 CI--RNNETSKVVELL 253
C+ R +E +++ +L+
Sbjct: 306 CLHDRIDEANQMFDLM 321
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 112/222 (50%)
Query: 35 EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYN 94
+++ A +LF M + ++V +N L++ K K + ++L +M GIR + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 95 TLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVL 154
+ + QV AL + +M + T + ++G C+ + +A L + +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 155 KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA 214
+ I AY+ +ID LCK ++ A++ F+ + R G+ PNVVTY +++G CN + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 215 HDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
L DM K + PN +T++ L+ ++N + + EL M
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
+A +LF + + I ++ L+ + K+ K + L + + +G+ ++ T+NI+I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
+ FC Q+ A + M G P+ VT +L+ G R N S V L+ +M E
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 187 bits (475), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 138/226 (61%), Gaps = 3/226 (1%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L + M +R V P+ F Y++LI+G C+ G +D A+++ M GC+ +VVTYNTLI
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+CK+K V+E L+ EM +G+ +TYNT+ G F+ + + A ++F M D
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSR 378
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TY+ + GLC N + +A LF ++ + EL I Y+ +I G+CKIG +E AW+L
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
F+SL GL P+VV+Y MI GFC Q DK+ L+ M+ G+ P
Sbjct: 439 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 138/256 (53%), Gaps = 3/256 (1%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A+RL+ M+ R + PN ++ +ID F G+ A +L+ M +V TYN+LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG C V+E+ + M++KG P VVTYNTL +G + +V+ KLF EM +
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+T TYNT I G + G A E+F + I YS L+ GLC ++E A L
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVL 403
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+++ + + ++ TYNI+IHG C G ++ A DLF + KG+ P+ V++ T++ G R
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Query: 243 NNETSKVVELLHRMDE 258
+ K L +M E
Sbjct: 464 KRQWDKSDLLYRKMQE 479
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 140/256 (54%), Gaps = 3/256 (1%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A L+ M + G RP+ +Y+T+IDG C G ++ A ELF M+ +G + VTYN+L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G C + ++ L +M+ + I P V+T+ + + + A+KL++EM V
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TYN+ I+GLC +G + EA ++ + C + Y+ LI+G CK +++ +L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+ + + GL+ + +TYN +I G+ G+ D A ++F M+++ PN T++ L+ G
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 393
Query: 243 NNETSKVVELLHRMDE 258
N K + L M +
Sbjct: 394 NWRVEKALVLFENMQK 409
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 131/249 (52%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M++ G P+ S+LI+GFC + A +L M+ G +VV YNT+I+G CK
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
V +++ L+ M G+R VTYN+L GL + A +L +M D+ T+
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
ID K G EA +L+ + + + Y+ LI+GLC G+++ A ++ + G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
+P+VVTYN +I+GFC ++D+ LF +M +G+ + +T+NT++ G +
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 251 ELLHRMDER 259
E+ RMD R
Sbjct: 370 EIFSRMDSR 378
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 133/245 (54%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ + + Y+ +I+ C A + M G +VVT ++LING+C+ V ++
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
++L S+M G RP VV YNT+ G +I V A++LFD M+ V A+ TYN+ + G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LC +G +AA L R + + + ++ +ID K GK A +L++ + R + P+
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
V TYN +I+G C G++D+A + M KG P+ VT+NTL+ G ++ + +L
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 255 RMDER 259
M +R
Sbjct: 339 EMAQR 343
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 4/237 (1%)
Query: 23 YSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
+ST L EID LF M + + ++V ++ +++ K+K+ + ++L+ M
Sbjct: 41 FSTKRSSMNLEEEID----LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 83 SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
GI + +YN + + L + AL + +M + T ++ I+G C+ +
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
+A +L + + + Y+ +IDG CKIG + A ELF + R G+ + VTYN ++
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
G C G+ A L DM + + PN +TF ++ ++ + S+ ++L M R
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%)
Query: 70 DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
++EE ++L+ +M+ P++V ++ + + + + + LF M+ + + +YN
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
I+ LC+ V A + + E + S LI+G C+ ++ A +L + +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
G P+VV YN +I G C G ++ A +LF ME GV + VT+N+L+ G + S
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 250 VELLHRMDERN 260
L+ M R+
Sbjct: 229 ARLMRDMVMRD 239
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A L + M + + + Y+ +I G C G ++ A +LF S+ G +VV+Y T
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRP 88
+I+G+C+ + ++S LY +M G+ P
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 180 bits (456), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 148/258 (57%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
E+ +L +LM++ GV+PN Y+TLI+G+CL G++D A +L M G N VTY+TLI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NGYCK +E++L L+ EM S G+ P ++TYN + GLF+ + A +L+ + S
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
E STYN + GLCKN +A ++F+ L ++ +L ++ +ID L K+G+ + A +L
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F + GL+PN TY +M G +++ LFL ME G + N ++ ++
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733
Query: 243 NNETSKVVELLHRMDERN 260
E ++ L +DE++
Sbjct: 734 RGEITRAGTYLSMIDEKH 751
Score = 174 bits (441), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 148/256 (57%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
E LLDLM++ G+ P+ +V+S LI + G++D+A +F M G N VTY +I
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
CK+ VE+++ + +M+ +G+ P + YN+L HGL ++ E A +L EM +
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T +N+ ID CK G ++E+ +LF + + + + Y+ LI+G C GK++ A +L
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ VGL PN VTY+ +I+G+C +M+ A LF +ME+ GV+P+ +T+N ++ G +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 243 NNETSKVVELLHRMDE 258
T+ EL R+ E
Sbjct: 594 TRRTAAAKELYVRITE 609
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 132/235 (56%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
+ A L+ M+ RG+ N ++++ID C G + + +LF M G NV+TYNTL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
INGYC ++E++ L S M+S G++P VTY+TL +G +I ++E AL LF EM+ S V
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+ + TYN + GL + A EL+ + ++ + Y+ ++ GLCK + A +
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
+FQ+L + L T+NIMI G+ D+A DLF+ + G+ PN T+ +
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 3/261 (1%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN---GCMHNVVTY 58
D +L M + G PN F Y+ L+ G C A EL M + G +VV+Y
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 59 NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
T+ING+ K D +++ + Y EML +GI P VVTYN++ L + ++ A+++ + M
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
+ V + TYN+ + G C +G EA + +R E + YS L+D LCK G+
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
A ++F S+ + GL P + TY ++ G+ G + + H L M G+ P+ F+ L+
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 239 GCIRNNETSKVVELLHRMDER 259
+ + + + + +M ++
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQ 400
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 131/258 (50%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+A M+ RG+ P+ Y+++I C +D+A E+ +M NG M + +TYN++
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 272
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
++GYC + +E++ +M S G+ P VVTY+ L L + + A K+FD M +
Sbjct: 273 LHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
E +TY T + G G +VE L + +S LI K GK++ A
Sbjct: 333 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
+F + + GL PN VTY +I C G+++ A F M +G++P + +N+L+ G
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452
Query: 242 RNNETSKVVELLHRMDER 259
N+ + EL+ M +R
Sbjct: 453 TCNKWERAEELILEMLDR 470
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 144/328 (43%), Gaps = 70/328 (21%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
MD+A +L+ M++ GV P+ Y++++ G+C +G+ A M +G +VVTY+
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG------LFEIH---------- 104
L++ CK E+ ++ M +G++P + TY TL G L E+H
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 105 -------------------QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
+V+ A+ +F +M+ + TY I LCK+G + +A
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE------------------------ 181
F + G Y+ LI GLC K E A E
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 182 -----------LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
LF+ + R+G+ PNV+TYN +I+G+C G+MD+A L M + G+ PN
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546
Query: 231 VTFNTLMLGCIRNNETSKVVELLHRMDE 258
VT++TL+ G + + + L M+
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMES 574
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 7/240 (2%)
Query: 3 EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
EA LL +M G P+ Y+T+I+GF G+ D+A + M G + +VVTYN
Sbjct: 176 EALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYN 235
Query: 60 TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
++I CK + +++++ + + M+ G+ P +TYN++ HG Q + A+ +M+
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD 295
Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTL--RVLKCELGIEAYSCLIDGLCKIGKLE 177
V + TY+ +D LCKNG +EA ++F ++ R LK E I Y L+ G G L
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE--ITTYGTLLQGYATKGALV 353
Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
L + R G+ P+ ++I+I + G++D+A +F M +G+ PN VT+ ++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 127/249 (51%), Gaps = 3/249 (1%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A + MI G+ P VY++LI G C + +RA EL + M G N + +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+ +CK V ES L+ M+ G++P V+TYNTL +G +++ A+KL M
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ T TY+T I+G CK + +A LF+ + I Y+ ++ GL + + A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL---M 237
EL+ + G + TYNI++HG C + D A +F ++ + TFN + +
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 238 LGCIRNNET 246
L RN+E
Sbjct: 662 LKVGRNDEA 670
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 54 NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKL- 112
++ TY LI C+ ++ ++ KG R + + L GL + A+ +
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL---RVLKCELGIEAYSCLIDG 169
M +YN + GLC EA EL + R + +Y+ +I+G
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
K G + A+ + + G++P+VVTYN +I C MDKA ++ M GV P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265
Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRM 256
C+T+N+++ G + + + + L +M
Sbjct: 266 CMTYNSILHGYCSSGQPKEAIGFLKKM 292
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 107 EHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE--AYS 164
E A +FDE+ A N + + ++ + R R E+ + Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL-DMEA 223
LI C+ G+L+ + ++ + G + + + ++ G C D + A D+ L M
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 224 KGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM-DER 259
G PN ++N L+ G N + + +ELLH M D+R
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDR 188
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 91/257 (35%), Gaps = 74/257 (28%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEID----------------------- 37
MDEA +LL M+ G++PN YSTLI+G+C ++
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 38 ------------RARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML--- 82
A+EL+V + +G + TYN +++G CK K +++L ++ +
Sbjct: 587 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646
Query: 83 --------------------------------SKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
S G+ P TY + + +E
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706
Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGL 170
+LF M+ + ++ N + L + G I A + L S ID L
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-L 765
Query: 171 CKIGKLETAWELFQSLP 187
GK + E ++ LP
Sbjct: 766 LSGGKYQ---EYYRFLP 779
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 5/164 (3%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+A ++ + ++ A ++ +ID G D A++LFV+ NG + N TY +
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
+EE L+ M G N + L + ++ A +
Sbjct: 693 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 752
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
+ E ST + FID L Y E +R L K + IE+ SC
Sbjct: 753 SLEASTASLFIDLLSGGKY----QEYYRFLPE-KYKSFIESLSC 791
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 144/256 (56%), Gaps = 4/256 (1%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L MI+R V PN F Y++LI+GFC+ G + A+ +F M GC +VVTYNTLI
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G+CK+K VE+ + L+ EM +G+ TYNTL HG + ++ A K+F+ M V+
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TYN +D LC NG I +A + L+ + ++ I Y+ +I GLC+ KL+ AW L
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+SL R G+ P+ + Y MI G C G +A L M+ G P+ ++ + R
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL----R 507
Query: 243 NNETSKVVELLHRMDE 258
++ TS EL+ E
Sbjct: 508 DHYTSLSAELIKAAHE 523
Score = 160 bits (406), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 4/258 (1%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A+RLL M++R + PN ++ LID F G + AR L+ M + NV TYN+LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+C + ++ ++ M+SKG P VVTYNTL G + +VE +KLF EM + +
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG--IEAYSCLIDGLCKIGKLETAW 180
+ TYNT I G C+ G + A ++F R++ C + I Y+ L+D LC GK+E A
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+ + L + + +++TYNI+I G C ++ +A LF + KGV P+ + + T++ G
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 241 IRNNETSKVVELLHRMDE 258
R + +L RM E
Sbjct: 475 CRKGLQREADKLCRRMKE 492
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 1/242 (0%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D M G PN +Y+T+I+G C +++ A E+F M+ G + VTYNTLI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G + ++ L +M+ + I P V+ + L + + A L+ EM V
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYN+ I+G C +G + +A +F + C + Y+ LI G CK ++E +L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F + GL+ + TYN +IHG+C G+++ A +F M GV+P+ VT+N ++L C+
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN-ILLDCLC 405
Query: 243 NN 244
NN
Sbjct: 406 NN 407
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 126/246 (51%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M++ G RP+ +L++GFC A L SMD G + NVV YNT+ING CK +D
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
+ +L ++ M KGIR VTYNTL GL + A +L +M + +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
ID K G ++EA L++ + + Y+ LI+G C G L A +F + G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
P+VVTYN +I GFC +++ LF +M +G+ + T+NTL+ G + + +
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 251 ELLHRM 256
++ +RM
Sbjct: 380 KVFNRM 385
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 129/242 (53%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ + + ++ LI FC + A L M G ++VT +L+NG+C+ +E+
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
++L M G P VV YNT+ +GL + + +AL++F M+ + A+ TYNT I G
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
L +G +AA L R + K + + ++ LID K G L A L++ + R ++PN
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
V TYN +I+GFC G + A +F M +KG P+ VT+NTL+ G ++ ++L
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 255 RM 256
M
Sbjct: 349 EM 350
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A + DLM+ +G P+ Y+TLI GFC + ++ +LF M G + + TYNT
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+GYC+ + + +++ M+ G+ P +VTYN L L ++E AL + +++Q S+
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TYN I GLC+ + EA LFR+L + AY +I GLC+ G A
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 181 ELFQSLPRVGLMPNVVTYN 199
+L + + G MP+ Y+
Sbjct: 485 KLCRRMKEDGFMPSERIYD 503
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 95/188 (50%)
Query: 72 EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTF 131
+++ +L+ EML P++V + + + ++++ + + L+ +M++ ++ + ++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 132 IDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGL 191
I C+ + A L + L I L++G C+ + + A L S+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 192 MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVE 251
+PNVV YN +I+G C + ++ A ++F ME KG+ + VT+NTL+ G + +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 252 LLHRMDER 259
LL M +R
Sbjct: 241 LLRDMVKR 248
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 35/236 (14%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+A L M+Q P+ ++ ++ + D L+ M+ G H++ ++ L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+ +C+ + +L L +M+ G RP++VT +L +G + ++ + A+ L D M
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM----- 175
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
DG G++ + Y+ +I+GLCK L A E
Sbjct: 176 -----------DGF---GFVPN----------------VVIYNTVINGLCKNRDLNNALE 205
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
+F + + G+ + VTYN +I G N G+ A L DM + + PN + F L+
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 174 bits (442), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 153/286 (53%), Gaps = 39/286 (13%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK--- 67
MI+R ++PN F ++ +I+ C TG++++AR++ M + GC NVV+YNTLI+GYCK
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 68 -----------------------------------TKDVEESLNLYSEMLSKGIRPTVVT 92
++ S+ ++ EML + ++P V++
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 93 YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLR 152
YN+L +GL ++ A+ + D+M + V TYN I+G CKN + EA ++F +++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 153 VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD 212
Y+ LID CK+GK++ + L + + R G++P+V TYN +I G C +G ++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 213 KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
A LF + +KG+ P+ VTF+ LM G R E+ K LL M +
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 135/258 (52%), Gaps = 1/258 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M +A +L M++ V PN ++ LIDGF + + ++F M NV++YN+
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LING C + E++++ +M+S G++P ++TYN L +G + ++ AL +F ++
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
T YN ID CK G I + L + + Y+CLI GLC+ G +E A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+LF L GL P++VT++I++ G+C G+ KA L +M G+ P +T+N +M G
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 241 IRNNETSKVVELLHRMDE 258
+ + +M++
Sbjct: 516 CKEGNLKAATNMRTQMEK 533
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 136/255 (53%), Gaps = 2/255 (0%)
Query: 6 RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
++ M+ + V+PN Y++LI+G C G+I A + M G N++TYN LING+
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 66 CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
CK ++E+L+++ + +G PT YN L ++ +++ L +EM+ + +
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
TYN I GLC+NG I A +LF L K + + L++G C+ G+ A L +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQL-TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLMLGCIRNN 244
+ ++GL P +TYNI++ G+C +G + A ++ ME + + N ++N L+ G +
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 245 ETSKVVELLHRMDER 259
+ LL+ M E+
Sbjct: 556 KLEDANMLLNEMLEK 570
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 108/245 (44%), Gaps = 37/245 (15%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA + D M+ GV+PN Y+ LI+GFC + A ++F S+ G + YN
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFD------ 114
LI+ YCK +++ L EM +GI P V TYN L GL +E A KLFD
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 115 ----------------------------EMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
EM + TYN + G CK G + +AA
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL-KAAT 525
Query: 147 LFRTL--RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
RT + + + + +Y+ L+ G + GKLE A L + GL+PN +TY I+
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEE 585
Query: 205 FCNDG 209
+ G
Sbjct: 586 MVDQG 590
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 9/246 (3%)
Query: 19 NAFVYS---TLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNTLINGYCKTKDVEE 73
NA YS + +DGF G + +F +SM N C+++++ + L+ Y E
Sbjct: 113 NAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFEL 171
Query: 74 SLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFID 133
+ G + + ++ L L + ++ ++ EM + T+N I+
Sbjct: 172 GFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVIN 231
Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI---GKLETAWELFQSLPRVG 190
LCK G + +A ++ ++V C + +Y+ LIDG CK+ GK+ A + + +
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND 291
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
+ PN+ T+NI+I GF D + + +F +M + V PN +++N+L+ G + S+ +
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 251 ELLHRM 256
+ +M
Sbjct: 352 SMRDKM 357
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++ A +L D + +G+ P+ + L++G+C GE +A L M G +TYN
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 61 LINGYCKTKDVEESLNLYSEM-LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
++ GYCK +++ + N+ ++M + +R V +YN L G + ++E A L +EM
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 120 DVAAETSTYNTFIDGLCKNGYIVE 143
+ TY + + G++ +
Sbjct: 571 GLVPNRITYEIVKEEMVDQGFVPD 594
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 39/200 (19%)
Query: 77 LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET-STYNTFIDGL 135
L+ +++S + P + + L + + +L+L ++ HS A+ S +F+DG
Sbjct: 70 LFRQLISSELDPDLCL--RYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGF 127
Query: 136 CKNGYIVEAAELFRTLRVL---------------------KCELGIEAY----------- 163
+NG + +F + + + ELG EA+
Sbjct: 128 VRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLS 187
Query: 164 --SC--LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
SC L+ L K + +++ + R + PNV T+N++I+ C G+M+KA D+
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 220 DMEAKGVAPNCVTFNTLMLG 239
DM+ G +PN V++NTL+ G
Sbjct: 248 DMKVYGCSPNVVSYNTLIDG 267
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 130/226 (57%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA L MIQ V PN Y+++I+G C+ G + A++ F M GC NVVTYNT
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G+CK + V+E + L+ M +G + TYNTL HG ++ ++ AL +F M
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V + T+ + GLC NG I A F +R + +GI AY+ +I GLCK K+E AW
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
ELF LP G+ P+ TY IMI G C +G +A +L M+ +G+
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 137/257 (53%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
+A+R+L M++R + P+ ++ LID F G +D A+EL+ M + N VTYN++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
ING C + ++ + M SKG P VVTYNTL G + V+ +KLF M
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
A+ TYNT I G C+ G + A ++F + + I + L+ GLC G++E+A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
F + +V YNIMIHG C +++KA +LF + +GV P+ T+ ++LG
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 242 RNNETSKVVELLHRMDE 258
+N + EL+ RM E
Sbjct: 468 KNGPRREADELIRRMKE 484
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 136/258 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+ LM++ G PN VY+TLIDG C GE++ A EL M+ G +VVTYNT
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+ G C + ++ + +M+ + I P VVT+ L + ++ A +L+ EM S
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V TYN+ I+GLC +G + +A + F + C + Y+ LI G CK ++
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+LFQ + G ++ TYN +IHG+C G++ A D+F M ++ V P+ +T L+ G
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 241 IRNNETSKVVELLHRMDE 258
N E + M E
Sbjct: 397 CVNGEIESALVKFDDMRE 414
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 123/236 (52%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A +L M++ G P+ + +L+ GFCL I A L + M +G NVV YNTLI+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G CK ++ +L L +EM KG+ VVTYNTL GL + A ++ +M +
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ T+ ID K G + EA EL++ + + Y+ +I+GLC G+L A + F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+ G PNVVTYN +I GFC +D+ LF M +G + T+NTL+ G
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 129/243 (53%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ + + ++ LI FC + A + M G ++VT+ +L++G+C + ++
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
+L M+ G P VV YNTL GL + ++ AL+L +EM+ + A+ TYNT + G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LC +G +AA + R + + ++ LID K G L+ A EL++ + + + PN
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
VTYN +I+G C G++ A F M +KG PN VT+NTL+ G + + ++L
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 255 RMD 257
RM
Sbjct: 341 RMS 343
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A + DLM +G PN Y+TLI GFC +D +LF M G ++ TYNTLI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+GYC+ + +L+++ M+S+ + P ++T+ L HGL ++E AL FD+M+ S+
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
YN I GLCK + +A ELF L V + Y+ +I GLCK G A EL
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 183 FQSLPRVGLM 192
+ + G++
Sbjct: 479 IRRMKEEGII 488
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 104/194 (53%)
Query: 46 MDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQ 105
M++ G H++ ++ LI+ +C+ + +L++ +M+ G P++VT+ +L HG +++
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 106 VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
+ A L M S YNT IDGLCKNG + A EL + + Y+
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
L+ GLC G+ A + + + + + P+VVT+ +I F G +D+A +L+ +M
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 226 VAPNCVTFNTLMLG 239
V PN VT+N+++ G
Sbjct: 277 VDPNNVTYNSIING 290
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%)
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L G+ + E++ L+ EM+ P++V + L + + E + +M+
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
++ + ++ I C+ + A + + L E I + L+ G C + ++ A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + G PNVV YN +I G C +G+++ A +L +ME KG+ + VT+NTL+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 241 IRNNETSKVVELLHRMDERN 260
+ S +L M +R+
Sbjct: 222 CYSGRWSDAARMLRDMMKRS 241
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 171 bits (432), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 145/256 (56%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+ +L+++M ++G++PN+++Y ++I C ++ A E F M G + + V Y T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G+CK D+ + + EM S+ I P V+TY + G +I + A KLF EM
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ ++ T+ I+G CK G++ +A + + C + Y+ LIDGLCK G L++A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
EL + ++GL PN+ TYN +++G C G +++A L + EA G+ + VT+ TLM
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 241 IRNNETSKVVELLHRM 256
++ E K E+L M
Sbjct: 537 CKSGEMDKAQEILKEM 552
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 132/239 (55%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA MI++G+ P+ VY+TLIDGFC G+I A + F M +V+TY
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+G+C+ D+ E+ L+ EM KG+ P VT+ L +G + ++ A ++ + M +
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY T IDGLCK G + A EL + + + I Y+ +++GLCK G +E A
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+L GL + VTY ++ +C G+MDKA ++ +M KG+ P VTFN LM G
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
AS+ M R + P+ Y+ +I GFC G++ A +LF M G + VT+ LIN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
GYCK ++++ +++ M+ G P VVTY TL GL + ++ A +L EM +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
TYN+ ++GLCK+G I EA +L Y+ L+D CK G+++ A E+
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIR 242
+ + GL P +VT+N++++GFC G ++ L M AKG+APN TFN+L+ CIR
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 243 NN 244
NN
Sbjct: 610 NN 611
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 134/253 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA LL LM +G P+ YST+++G+C GE+D+ +L M G N Y +
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I C+ + E+ +SEM+ +GI P V Y TL G + + A K F EM D
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TY I G C+ G +VEA +LF + E ++ LI+G CK G ++ A+
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+ + + G PNVVTY +I G C +G +D A++L +M G+ PN T+N+++ G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 241 IRNNETSKVVELL 253
++ + V+L+
Sbjct: 502 CKSGNIEEAVKLV 514
Score = 147 bits (371), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 136/256 (53%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M EA +L M +G+ P++ ++ LI+G+C G + A + M GC NVVTY T
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G CK D++ + L EM G++P + TYN++ +GL + +E A+KL E + +
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ A+T TY T +D CK+G + +A E+ + + + I ++ L++G C G LE
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L + G+ PN T+N ++ +C + A ++ DM ++GV P+ T+ L+ G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 241 IRNNETSKVVELLHRM 256
+ + L M
Sbjct: 642 CKARNMKEAWFLFQEM 657
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 123/242 (50%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
GV N Y+ +I C G I A L + M++ G +V++Y+T++NGYC+ ++++
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
L M KG++P Y ++ L I ++ A + F EM + +T Y T IDG
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
CK G I A++ F + + Y+ +I G C+IG + A +LF + GL P+
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
VT+ +I+G+C G M A + M G +PN VT+ TL+ G + + ELLH
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 255 RM 256
M
Sbjct: 481 EM 482
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 130/238 (54%), Gaps = 8/238 (3%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D A+ LL M + G++PN F Y+++++G C +G I+ A +L + G + VTY T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L++ YCK+ +++++ + EML KG++PT+VT+N L +G +E KL + M
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKL 176
+A +T+N+ + C + A +++ + C G+ + Y L+ G CK +
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDM----CSRGVGPDGKTYENLVKGHCKARNM 647
Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
+ AW LFQ + G +V TY+++I GF + +A ++F M +G+A + F+
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA +L+ G+ + Y+TL+D +C +GE+D+A+E+ M G +VT+N
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+NG+C +E+ L + ML+KGI P T+N+L + ++ A ++ +M
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V + TY + G CK + EA LF+ ++ + + YS LI G K K A
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
E+F + R GL + + D F D + KG P+ +
Sbjct: 687 EVFDQMRREGLAAD-----------------KEIFDFFSDTKYKGKRPDTI 720
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLF-EIHQVEHALKLFDEMQHSDVAAETSTYN 129
+ E+ ++ +ML+ G+ +V + N L + ++ A+ +F E V ++YN
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
I +C+ G I EA L + + + +YS +++G C+ G+L+ W+L + + R
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
GL PN Y +I C ++ +A + F +M +G+ P+ V + TL+ G + +
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 250 VELLHRMDERN 260
+ + M R+
Sbjct: 371 SKFFYEMHSRD 381
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 137/239 (57%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A +L M +G +PN + Y+ L+DGFC G+ID A + M +G N V +N LI+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
+CK + E++ ++ EM KG +P V T+N+L GL E+ +++HAL L +M V A
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
T TYNT I+ + G I EA +L + L Y+ LI GLC+ G+++ A LF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ + R G P+ ++ NI+I+G C G +++A + +M +G P+ VTFN+L+ G R
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 138/239 (57%), Gaps = 4/239 (1%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA +L+ M G++PN ++ LI FC I A E+F M GC +V T+N+
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G C+ +++ +L L +M+S+G+ VTYNTL + +++ A KL +EM
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLET 178
+ TYN+ I GLC+ G + +A LF ++L+ SC LI+GLC+ G +E
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFE--KMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
A E + + G P++VT+N +I+G C G+++ +F ++A+G+ P+ VTFNTLM
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D A LL M + G PN+ +Y TLI ++ A +L M + GC+ + T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF------- 113
+I G CK + E+ + + ML +G P +TY L +GL +I +V+ A LF
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 114 -------------------------DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
D + + + TYN+ I G K G + A E+
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
+R C+ + +Y+ L+DG CK+GK++ A+ + + GL PN V +N +I FC +
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
++ +A ++F +M KG P+ TFN+L+ G +E + LL M
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 32/288 (11%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN----------- 49
++EA+++++ M+ RG P+ Y L++G C G +D A++LF +
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 50 ---------------------GCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRP 88
G + +V TYN+LI GY K V +L + +M +KG +P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 89 TVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
V +Y L G ++ +++ A + +EM + T +N I CK I EA E+F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
R + C+ + ++ LI GLC++ +++ A L + + G++ N VTYN +I+ F
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
G++ +A L +M +G + +T+N+L+ G R E K L +M
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 127/241 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA + M ++G +P+ + +++LI G C EI A L M G + N VTYNT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LIN + + +++E+ L +EM+ +G +TYN+L GL +V+ A LF++M
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
A + N I+GLC++G + EA E + + + I ++ LI+GLC+ G++E
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+F+ L G+ P+ VT+N ++ C G + A L + G PN T++ L+
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Query: 241 I 241
I
Sbjct: 715 I 715
Score = 130 bits (328), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M+ R + P F + ++ FC EID A L M +GC+ N V Y TLI+ K
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
V E+L L EM G P T+N + GL + ++ A K+ + M A + TY
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIE----------------------------- 161
++GLCK G + A +LF R+ K E+ I
Sbjct: 328 LMNGLCKIGRVDAAKDLF--YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 162 -----AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
Y+ LI G K G + A E+ + G PNV +Y I++ GFC G++D+A++
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
+ +M A G+ PN V FN L+ + + + VE+ M +
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ A LL MI GV N Y+TLI+ F GEI AR+L M G + +TYN+
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G C+ +V+++ +L+ +ML G P+ ++ N L +GL VE A++ EM
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ T+N+ I+GLC+ G I + +FR L+ ++ L+ LCK G + A
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
L G +PN T++I++ +D+
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 13/256 (5%)
Query: 6 RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-DINGCMHNVVTYNT---- 60
RLL M G+ ++ +++ + G + L + M ++ C +YN
Sbjct: 132 RLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 191
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L++G C + + N++ +MLS+ I PT+ T+ + +++++ AL L +M
Sbjct: 192 LVSGNCH----KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG 247
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ Y T I L K + EA +L + ++ C E ++ +I GLCK ++ A
Sbjct: 248 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 307
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
++ + G P+ +TY +++G C G++D A DLF + P V FNTL+ G
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGF 363
Query: 241 IRNNETSKVVELLHRM 256
+ + +L M
Sbjct: 364 VTHGRLDDAKAVLSDM 379
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 142/259 (54%), Gaps = 3/259 (1%)
Query: 3 EASRLLDLMIQR---GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
E + DL+I+ G PN +Y+TLIDG C GEI++A++LF M G + N TY
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 60 TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
LING K ++ +Y +M G+ P + TYN + + L + + + A ++FDEM+
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
V+ TYNT I GLC+ + EA ++ ++ + Y+ LIDG C +GKL A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
L + L GL P++VTYNI++ GFC G A + +ME +G+ P+ VT+ L+
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 240 CIRNNETSKVVELLHRMDE 258
R++ K ++L M+E
Sbjct: 418 FARSDNMEKAIQLRLSMEE 436
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 139/253 (54%)
Query: 7 LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
+ + M + GV PN + Y+ +++ C G A ++F M G N+VTYNTLI G C
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 67 KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
+ + E+ + +M S GI P ++TYNTL G + ++ AL L +++ ++
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
TYN + G C+ G AA++ + + + Y+ LID + +E A +L S+
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
+GL+P+V TY+++IHGFC GQM++A LF M K PN V +NT++LG + +
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 247 SKVVELLHRMDER 259
+ ++LL M+E+
Sbjct: 495 YRALKLLKEMEEK 507
Score = 154 bits (389), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 138/241 (57%)
Query: 19 NAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLY 78
+ + + LI G C GEI+++ +L + + G NVV Y TLI+G CK ++E++ +L+
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 79 SEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKN 138
EM G+ TY L +GLF+ + +++++MQ V TYN ++ LCK+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
G +A ++F +R I Y+ LI GLC+ KL A ++ + G+ PN++TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
N +I GFC G++ KA L D++++G++P+ VT+N L+ G R +TS +++ M+E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 259 R 259
R
Sbjct: 402 R 402
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 133/254 (52%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A ++ D M +RGV N Y+TLI G C +++ A ++ M +G N++TYNTLI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G+C + ++L+L ++ S+G+ P++VTYN L G A K+ EM+ +
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TY ID ++ + +A +L ++ L + YS LI G C G++ A L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F+S+ PN V YN MI G+C +G +A L +ME K +APN ++ ++ +
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 243 NNETSKVVELLHRM 256
++ + L+ +M
Sbjct: 526 ERKSKEAERLVEKM 539
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 119/229 (51%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA++++D M G+ PN Y+TLIDGFC G++ +A L + G ++VTYN
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L++G+C+ D + + EM +GI+P+ VTY L +E A++L M+
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TY+ I G C G + EA+ LF+++ CE Y+ +I G CK G A
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
+L + + L PNV +Y MI C + + +A L M G+ P+
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 58 YNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
Y +IN Y +++ + S++ ++EM+ G P +N L + F+E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
S V + ++ I G C+ G I ++ +L L + Y+ LIDG CK G++E
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
A +LF + ++GL+ N TY ++I+G +G + +++ M+ GV PN T+N +M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 238 LGCIRNNETSKVVELLHRMDER 259
++ T ++ M ER
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRER 297
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M++A +L M + G+ P+ YS LI GFC+ G+++ A LF SM C N V YNT
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I GYCK +L L EM K + P V +Y + L + + + A +L ++M S
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 121 VAAETS 126
+ TS
Sbjct: 544 IDPSTS 549
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 132/253 (52%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A ++D+M+Q G P+ + Y+++I G C GE+ A E+ M C N VTYNTLI+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
CK VEE+ L + SKGI P V T+N+L GL A++LF+EM+
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ TYN ID LC G + EA + + + + C + Y+ LIDG CK K A E+F
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ G+ N VTYN +I G C +++ A L M +G P+ T+N+L+ R
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 244 NETSKVVELLHRM 256
+ K +++ M
Sbjct: 554 GDIKKAADIVQAM 566
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 129/254 (50%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +LD MI R PN Y+TLI C +++ A EL + G + +V T+N+LI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G C T++ ++ L+ EM SKG P TYN L L +++ AL + +M+ S A
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYNT IDG CK EA E+F + V Y+ LIDGLCK ++E A +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ G P+ TYN ++ FC G + KA D+ M + G P+ VT+ TL+ G +
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 243 NNETSKVVELLHRM 256
+LL +
Sbjct: 588 AGRVEVASKLLRSI 601
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 143/260 (55%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA+ L ++ +G+ P+ +++LI G CLT A ELF M GC + TYN
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+ C ++E+LN+ +M G +V+TYNTL G + ++ A ++FDEM+
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V+ + TYNT IDGLCK+ + +AA+L + + + Y+ L+ C+ G ++ A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
++ Q++ G P++VTY +I G C G+++ A L ++ KG+ +N ++ G
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Query: 241 IRNNETSKVVELLHRMDERN 260
R +T++ + L M E+N
Sbjct: 621 FRKRKTTEAINLFREMLEQN 640
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 134/244 (54%)
Query: 13 QRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVE 72
Q G P+ + ++TL++G C G + A E+ M G +V TYN++I+G CK +V+
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 73 ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
E++ + +M+++ P VTYNTL L + +QVE A +L + + + T+N+ I
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
GLC A ELF +R CE Y+ LID LC GKL+ A + + + G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVEL 252
+V+TYN +I GFC + +A ++F +ME GV+ N VT+NTL+ G ++ +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 253 LHRM 256
+ +M
Sbjct: 528 MDQM 531
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 127/237 (53%), Gaps = 1/237 (0%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A L + M +G P+ F Y+ LID C G++D A + M+++GC +V+TYNTLI+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G+CK E+ ++ EM G+ VTYNTL GL + +VE A +L D+M
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ TYN+ + C+ G I +AA++ + + CE I Y LI GLCK G++E A +L
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLG 239
+S+ G+ YN +I G + +A +LF +M E P+ V++ + G
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 135/252 (53%), Gaps = 1/252 (0%)
Query: 7 LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
+L+ M G+ P+ ++T++ G+ G++D A + M GC + V+ N +++G+C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 67 KTKDVEESLNLYSEMLSK-GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
K VE++LN EM ++ G P T+NTL +GL + V+HA+++ D M +
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
TYN+ I GLCK G + EA E+ + C Y+ LI LCK ++E A EL +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
L G++P+V T+N +I G C A +LF +M +KG P+ T+N L+ +
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 246 TSKVVELLHRMD 257
+ + +L +M+
Sbjct: 451 LDEALNMLKQME 462
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 133/256 (51%), Gaps = 2/256 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA +L M G + Y+TLIDGFC + A E+F M+++G N VTYNT
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G CK++ VE++ L +M+ +G +P TYN+L ++ A + M +
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY T I GLCK G + A++L R++++ L AY+ +I GL + K A
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 181 ELFQS-LPRVGLMPNVVTYNIMIHGFCN-DGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
LF+ L + P+ V+Y I+ G CN G + +A D +++ KG P + L
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690
Query: 239 GCIRNNETSKVVELLH 254
G + + +V+L++
Sbjct: 691 GLLTLSMEETLVKLVN 706
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 126/246 (51%), Gaps = 1/246 (0%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G++P+ ++ LI C ++ A + M G + + T+ T++ GY + D++ +
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD-VAAETSTYNTFID 133
L + +M+ G + V+ N + HG + +VE AL EM + D + T+NT ++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 134 GLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMP 193
GLCK G++ A E+ + + + Y+ +I GLCK+G+++ A E+ + P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 194 NVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELL 253
N VTYN +I C + Q+++A +L + +KG+ P+ TFN+L+ G +EL
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 254 HRMDER 259
M +
Sbjct: 424 EEMRSK 429
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 12/258 (4%)
Query: 2 DEASRLLDLMIQR-GVRPNAFVYST----LIDGFCLT-GEIDRARELFVSMDINGCMHNV 55
DE ++D MI G++P+ Y+ L+DG L EI A+ M + G +V
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK-----MSVWGIKPDV 189
Query: 56 VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
T+N LI C+ + ++ + +M S G+ P T+ T+ G E ++ AL++ ++
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-AYSCLIDGLCKIG 174
M + + N + G CK G + +A + + + ++ L++GLCK G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
++ A E+ + + G P+V TYN +I G C G++ +A ++ M + +PN VT+N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 235 TLMLGCIRNNETSKVVEL 252
TL+ + N+ + EL
Sbjct: 370 TLISTLCKENQVEEATEL 387
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 125/295 (42%), Gaps = 38/295 (12%)
Query: 4 ASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
A RL +L ++ P +Y ++ +G D +++ M + C T+ LI
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 63 NGYCKTKDVEESLNL----------------YSEMLS--------------------KGI 86
Y + + +E L++ Y+ ML+ GI
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 87 RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
+P V T+N L L HQ+ A+ + ++M + + T+ T + G + G + A
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 147 LFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP-RVGLMPNVVTYNIMIHGF 205
+ + C + + ++ G CK G++E A Q + + G P+ T+N +++G
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
C G + A ++ M +G P+ T+N+++ G + E + VE+L +M R+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 141/249 (56%), Gaps = 2/249 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
MD A L D M +RG+ PN +++TLI G GEID +E + M G ++V YNT
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+NG+CK D+ + N+ M+ +G+RP +TY TL G VE AL++ EM +
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + ++ + G+CK G +++A R + + Y+ ++D CK G +T +
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLD-MEAKGVAPNCVTFNTLMLG 239
+L + + G +P+VVTYN++++G C GQM A D+ LD M GV P+ +T+NTL+ G
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA-DMLLDAMLNIGVVPDDITYNTLLEG 564
Query: 240 CIRNNETSK 248
R+ +SK
Sbjct: 565 HHRHANSSK 573
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 130/256 (50%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DE RL M + RP+ F YS LI+ C ++D A LF M G + N V + T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G+ + +++ Y +MLSKG++P +V YNTL +G + + A + D M
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TY T IDG C+ G + A E+ + + EL +S L+ G+CK G++ A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+ + R G+ P+ VTY +M+ FC G L +M++ G P+ VT+N L+ G
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 241 IRNNETSKVVELLHRM 256
+ + LL M
Sbjct: 531 CKLGQMKNADMLLDAM 546
Score = 127 bits (319), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 120/229 (52%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
++ G N +V++ L++ FC G I A+++F + VV++NTLINGYCK +
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
++E L +M RP V TY+ L + L + ++++ A LFDEM + + T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
I G +NG I E ++ + + I Y+ L++G CK G L A + + R G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
L P+ +TY +I GFC G ++ A ++ +M+ G+ + V F+ L+ G
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A ++ D + +R ++P ++TLI+G+C G +D L M+ + +V TY+
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LIN CK ++ + L+ EM +G+ P V + TL HG +++ + + +M
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF-----RTLRVLKCELGIEAYSCLIDGLCKIGK 175
+ + YNT ++G CKNG +V A + R LR K Y+ LIDG C+ G
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI-----TYTTLIDGFCRGGD 430
Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
+ETA E+ + + + G+ + V ++ ++ G C +G++ A +M G+ P+ VT+
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 236 LMLGCIRNNETSKVVELLHRM 256
+M + + +LL M
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEM 511
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 115/209 (55%), Gaps = 8/209 (3%)
Query: 54 NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
NV +N L+N +CK ++ ++ ++ E+ + ++PTVV++NTL +G ++ ++ +L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDG 169
+M+ S + TY+ I+ LCK + A LF + C+ G+ ++ LI G
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM----CKRGLIPNDVIFTTLIHG 354
Query: 170 LCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
+ G+++ E +Q + GL P++V YN +++GFC +G + A ++ M +G+ P+
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 230 CVTFNTLMLGCIRNNETSKVVELLHRMDE 258
+T+ TL+ G R + +E+ MD+
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQ 443
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%)
Query: 77 LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
Y E+L G V +N L + + + A K+FDE+ + ++NT I+G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
K G + E L + + + YS LI+ LCK K++ A LF + + GL+PN V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
+ +IHG +G++D + + M +KG+ P+ V +NTL+ G +N +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A R L M++ G++P+ Y+ ++D FC G+ +L M +G + +VVTYN L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG CK ++ + L ML+ G+ P +TYNTL G H+ ++ K + + +
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH---HRHANSSKRYIQKPEIGIV 584
Query: 123 AETSTYNTFIDGL 135
A+ ++Y + ++ L
Sbjct: 585 ADLASYKSIVNEL 597
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 139 GYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTY 198
G+I +A + FR R + ++ I L+D + K+ T W + + G NV +
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243
Query: 199 NIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
NI+++ FC +G + A +F ++ + + P V+FNTL+ G + + L H+M++
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 35/134 (26%)
Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDG-------- 209
L + ++ L++ CK G + A ++F + + L P VV++N +I+G+C G
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 210 ---------------------------QMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+MD AH LF +M +G+ PN V F TL+ G R
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 243 NNETSKVVELLHRM 256
N E + E +M
Sbjct: 358 NGEIDLMKESYQKM 371
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 164 bits (415), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 144/263 (54%), Gaps = 38/263 (14%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A L + MI+ + PN F Y++LI+GFC+ G +D AR++F M+ GC +VV Y +LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 63 NGYCKTKDVEESLNLY-----------------------------------SEMLSKGIR 87
NG+CK K V++++ ++ S M+S+G+
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 88 PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD---VAAETSTYNTFIDGLCKNGYIVEA 144
P + TYN L H L +V+ AL +F++MQ + VA TYN + GLC NG + +A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
+F +R + ++GI Y+ +I G+CK GK++ A LF SLP G+ PNVVTY MI G
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 205 FCNDGQMDKAHDLFLDMEAKGVA 227
+G +AH LF M+ GV+
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGVS 527
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 141/259 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M+EA +++ M++ G++P+ +Y+T+ID C G ++ A LF M+ G +VV Y +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+NG C + ++ +L M + I+P V+T+N L + + A +L++EM
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+A TY + I+G C G + EA ++F + C + AY+ LI+G CK K++ A
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
++F + + GL N +TY +I GF G+ + A ++F M ++GV PN T+N L+
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 241 IRNNETSKVVELLHRMDER 259
N + K + + M +R
Sbjct: 398 CYNGKVKKALMIFEDMQKR 416
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 135/245 (55%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
GV + + + L++ FC + + A M G ++VT+ +LING+C +EE+
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
+++ ++M+ GI+P VV Y T+ L + V +AL LFD+M++ + + Y + ++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LC +G +A L R + K + + ++ LID K GK A EL+ + R+ + PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
+ TY +I+GFC +G +D+A +F ME KG P+ V + +L+ G + + +++ +
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 255 RMDER 259
M ++
Sbjct: 342 EMSQK 346
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 131/256 (51%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
AS L M++ G P+ +++LI+GFCL ++ A + M G +VV Y T+I+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
CK V +L+L+ +M + GIRP VV Y +L +GL + A L M +
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ T+N ID K G ++A EL+ + + I Y+ LI+G C G ++ A ++F
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ G P+VV Y +I+GFC ++D A +F +M KG+ N +T+ TL+ G +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 244 NETSKVVELLHRMDER 259
+ + E+ M R
Sbjct: 366 GKPNVAQEVFSHMVSR 381
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 19/272 (6%)
Query: 4 ASRLLDLMIQRGVRPN---AFVYSTLID------GFCLTGEIDR----------ARELFV 44
A R L R V+ N A +S L+D FC EI R A +LF
Sbjct: 2 AMRFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFT 61
Query: 45 SMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
M + + +++ + L+N K K + +NL + G+ + T N L + +
Sbjct: 62 HMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSS 121
Query: 105 QVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
Q A +M + T+ + I+G C + EA + + + + + Y+
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
+ID LCK G + A LF + G+ P+VV Y +++G CN G+ A L M +
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
+ P+ +TFN L+ ++ + EL + M
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 104/228 (45%)
Query: 32 LTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVV 91
+ G +A +D++ + Y ++ + E+L+L++ M+ P+++
Sbjct: 14 VKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSII 73
Query: 92 TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
+ L + + ++ + + + L D +Q V+ + T N ++ C++ A+ +
Sbjct: 74 DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133
Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
L E I ++ LI+G C ++E A + + +G+ P+VV Y +I C +G +
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
+ A LF ME G+ P+ V + +L+ G + LL M +R
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 164 bits (414), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 136/238 (57%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
EA L+D M+QRG +P+ Y +++G C G+ D A L M+ NVV Y+T+
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+ CK + +++LNL++EM +KG+RP V+TY++L L + A +L +M +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
T++ ID K G +V+A +L+ + + I YS LI+G C + +L A +
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+ + + R +PNVVTYN +I+GFC ++DK +LF +M +G+ N VT+ TL+ G
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Score = 147 bits (371), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 108/180 (60%), Gaps = 4/180 (2%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A +L + MI+R + PN F YS+LI+GFC+ + A+++ M C+ NVVTYNTLI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+CK K V++ + L+ EM +G+ VTY TL HG F+ ++A +F +M V
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYN +DGLCKNG + +A +F L+ E I Y+ +I+G+CK GK W++
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK----WKM 516
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 135/259 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+D M++ G +P+ ++TLI G L + A L M GC ++VTY
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++NG CK D + +LNL ++M + I VV Y+T+ L + + AL LF EM++
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V TY++ I LC G +A+ L + K + +S LID K GKL A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L++ + + + PN+ TY+ +I+GFC ++ +A + M K PN VT+NTL+ G
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 241 IRNNETSKVVELLHRMDER 259
+ K +EL M +R
Sbjct: 404 CKAKRVDKGMELFREMSQR 422
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 114/209 (54%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
+ASRLL MI+R + PN +S LID F G++ +A +L+ M N+ TY++L
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
ING+C + E+ + M+ K P VVTYNTL +G + +V+ ++LF EM +
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
T TY T I G + A +F+ + + I Y+ L+DGLCK GKL A
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQ 210
+F+ L R + P++ TYNIMI G C G+
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ N + Y+ LI+ FC + A L M G ++VT N+L+NG+C + ++
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
+ L +M+ G +P VT+ TL HGLF ++ A+ L D M + TY ++G
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
LCK G A L + K E + YS +ID LCK + A LF + G+ PN
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLH 254
V+TY+ +I CN G+ A L DM + + PN VTF+ L+ ++ + K +L
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 255 RMDERN 260
M +R+
Sbjct: 348 EMIKRS 353
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 122/238 (51%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+A L M +GVRPN YS+LI C G A L M N+VT++ L
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+ + K + ++ LY EM+ + I P + TY++L +G + ++ A ++ + M D
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
TYNT I+G CK + + ELFR + Y+ LI G + + A
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+F+ + VG+ PN++TYNI++ G C +G++ KA +F ++ + P+ T+N ++ G
Sbjct: 450 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 3/250 (1%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M++ G P+ ++L++GFC I A L M G + VT+ TLI+G
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
E++ L M+ +G +P +VTY + +GL + + AL L ++M+ + + A Y+T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
ID LCK + +A LF + + YS LI LC G+ A L +
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CI--RNNETS 247
+ PN+VT++ +I F G++ KA L+ +M + + PN T+++L+ G C+ R E
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 248 KVVELLHRMD 257
+++EL+ R D
Sbjct: 379 QMLELMIRKD 388
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 87/139 (62%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA ++L+LMI++ PN Y+TLI+GFC +D+ ELF M G + N VTY T
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G+ + +D + + ++ +M+S G+ P ++TYN L GL + ++ A+ +F+ +Q S
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 121 VAAETSTYNTFIDGLCKNG 139
+ + TYN I+G+CK G
Sbjct: 494 MEPDIYTYNIMIEGMCKAG 512
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 90/188 (47%)
Query: 70 DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
++++++ L+ M P+++ ++ L + ++++ + + ++M+ ++ TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
I+ C+ + A L + L E I + L++G C ++ A L + +
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
G P+ VT+ +IHG + +A L M +G P+ VT+ ++ G + +T
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 250 VELLHRMD 257
+ LL++M+
Sbjct: 238 LNLLNKME 245
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 160 bits (405), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 136/256 (53%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A+R++ M +R + P+ F ++ LID G + A E + M ++VTY+ LI
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G C ++E+ ++ M+SKG P VVTY+ L +G + +VEH +KLF EM V
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T TY I G C+ G + A E+FR + I Y+ L+ GLC GK+E A +
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ + G+ ++VTYNI+I G C G++ A D++ + +G+ P+ T+ T+MLG +
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 243 NNETSKVVELLHRMDE 258
+ L +M E
Sbjct: 479 KGLRREADALFRKMKE 494
Score = 157 bits (397), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 140/256 (54%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A + D M+ G +PN +Y+T+IDG C + ++D A +L M+ +G +VVTYN+LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G C + ++ + S M + I P V T+N L + +V A + ++EM +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TY+ I GLC + EA E+F + C + YS LI+G CK K+E +L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F + + G++ N VTY I+I G+C G+++ A ++F M GV PN +T+N L+ G
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 243 NNETSKVVELLHRMDE 258
N + K + +L M +
Sbjct: 409 NGKIEKALVILADMQK 424
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 122/229 (53%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA + MI+R + P+ YS LI G C+ +D A E+F M GC +VVTY+
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LINGYCK+K VE + L+ EM +G+ VTY L G ++ A ++F M
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V TYN + GLC NG I +A + ++ + I Y+ +I G+CK G++ AW
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPN 229
+++ SL GLMP++ TY M+ G G +A LF M+ G+ PN
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 133/253 (52%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A L MI+ G P+ + +L++GFC + A +F M G NVV YNT+I+
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G CK+K V+ +L+L + M GI P VVTYN+L GL + A ++ M ++
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ T+N ID K G + EA E + + + I YS LI GLC +L+ A E+F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ G P+VVTY+I+I+G+C +++ LF +M +GV N VT+ L+ G R
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 244 NETSKVVELLHRM 256
+ + E+ RM
Sbjct: 375 GKLNVAEEIFRRM 387
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 138/253 (54%)
Query: 7 LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
L + M G+ N + L++ FC ++ A M G ++VT+ +L+NG+C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 67 KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
+ V ++L ++ +M+ G +P VV YNT+ GL + QV++AL L + M+ + +
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
TYN+ I GLC +G +A + + + + ++ LID K G++ A E ++ +
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
R L P++VTY+++I+G C ++D+A ++F M +KG P+ VT++ L+ G ++ +
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 247 SKVVELLHRMDER 259
++L M +R
Sbjct: 343 EHGMKLFCEMSQR 355
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 35/260 (13%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D++ L M+Q P+ +S L+ + D L+ M + G HN+ T N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+N +C+ + +L+ +M+ G P++VT+ +L
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL------------------------ 157
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
++G C+ + +A +F + + + + Y+ +IDGLCK +++ A
Sbjct: 158 -----------LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L + + G+ P+VVTYN +I G C+ G+ A + M + + P+ TFN L+ C
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 241 IRNNETSKVVELLHRMDERN 260
++ S+ E M R+
Sbjct: 267 VKEGRVSEAEEFYEEMIRRS 286
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 20/218 (9%)
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIR--------------------PTVVTYNTLFHGLF 101
I G+C ++ + + Y EML GIR P++ ++ L +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 102 EIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE 161
++ + + + L+++MQ + T N ++ C+ + A + L E I
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 162 AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
+ L++G C+ ++ A +F + +G PNVV YN +I G C Q+D A DL M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 222 EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
E G+ P+ VT+N+L+ G + S ++ M +R
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 139/256 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+ +LL M +G+ PN Y+ +I+G C G + + M+ G + VTYNT
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI GYCK + ++L +++EML G+ P+V+TY +L H + + + A++ D+M+
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY T +DG + GY+ EA + R + + Y+ LI+G C GK+E A
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+ + + GL P+VV+Y+ ++ GFC +D+A + +M KG+ P+ +T+++L+ G
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 241 IRNNETSKVVELLHRM 256
T + +L M
Sbjct: 496 CEQRRTKEACDLYEEM 511
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 139/253 (54%), Gaps = 1/253 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M+ A LD M RG+ PN Y+TL+DGF G ++ A + M+ NG +VVTYN
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LING+C T +E+++ + +M KG+ P VV+Y+T+ G + V+ AL++ EM
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ +T TY++ I G C+ EA +L+ + + Y+ LI+ C G LE A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L + G++P+VVTY+++I+G + +A L L + + P+ VT++TL+ C
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 241 IRNNETSKVVELL 253
N E VV L+
Sbjct: 601 -SNIEFKSVVSLI 612
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 138/250 (55%), Gaps = 8/250 (3%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M++ G+ P+ Y++LI C G ++RA E M + G N TY TL++G+ +
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
+ E+ + EM G P+VVTYN L +G ++E A+ + ++M+ ++ + +Y+T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLETAWELFQSL 186
+ G C++ + EA + R + E GI+ YS LI G C+ + + A +L++ +
Sbjct: 456 VLSGFCRSYDVDEALRVKREM----VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
RVGL P+ TY +I+ +C +G ++KA L +M KGV P+ VT++ L+ G + + T
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 247 SKVVELLHRM 256
+ LL ++
Sbjct: 572 REAKRLLLKL 581
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 1/259 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE-IDRARELFVSMDINGCMHNVVTYN 59
+D+A ++ L G P Y+ ++D + I A +F M + NV TYN
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 60 TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
LI G+C +++ +L L+ +M +KG P VVTYNTL G ++ +++ KL M
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
+ +YN I+GLC+ G + E + + + L Y+ LI G CK G A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+ + R GL P+V+TY +IH C G M++A + M +G+ PN T+ TL+ G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 240 CIRNNETSKVVELLHRMDE 258
+ ++ +L M++
Sbjct: 390 FSQKGYMNEAYRVLREMND 408
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 15/252 (5%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M++A +L+ M ++G+ P+ YST++ GFC + ++D A + M G + +TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G+C+ + +E+ +LY EML G+ P TY L + +E AL+L +EM
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKCELGIEAYSC 165
V + TY+ I+GL K EA L + TL + ++
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
LI G C G + A ++F+S+ P+ YNIMIHG C G + KA+ L+ +M G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 226 VAPNCVTFNTLM 237
+ VT L+
Sbjct: 671 FLLHTVTVIALV 682
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 124/239 (51%), Gaps = 1/239 (0%)
Query: 22 VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK-DVEESLNLYSE 80
V+ ++ + ID+A + +G M V++YN +++ ++K ++ + N++ E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 81 MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGY 140
ML + P V TYN L G ++ AL LFD+M+ TYNT IDG CK
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 141 IVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNI 200
I + +L R++ + E + +Y+ +I+GLC+ G+++ + + R G + VTYN
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 201 MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
+I G+C +G +A + +M G+ P+ +T+ +L+ + ++ +E L +M R
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 120/228 (52%), Gaps = 15/228 (6%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA R+ M+++G++P+ YS+LI GFC A +L+ M G + TY
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHA----LKLF-DE 115
LIN YC D+E++L L++EM+ KG+ P VVTY+ L +GL + + A LKLF +E
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 116 MQHSDVAAETSTYN----------TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC 165
SDV T N + I G C G + EA ++F ++ + AY+
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
+I G C+ G + A+ L++ + + G + + VT ++ +G++++
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 54/247 (21%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L + M++ G+ P+ F Y+ LI+ +C+ G++++A +L M G + +VVTY+ LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 63 NG--------------------------------------------------YCKTKDVE 72
NG +C +
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 73 ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
E+ ++ ML K +P YN + HG + A L+ EM S T T +
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 133 DGLCKNGYIVEAAELFRTLRVLK-CELG-IEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
L K G + E + + VL+ CEL E L++ + G ++ ++ + + G
Sbjct: 683 KALHKEGKVNELNSVI--VHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
Query: 191 LMPNVVT 197
+PN ++
Sbjct: 741 FLPNGIS 747
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 142/258 (55%), Gaps = 3/258 (1%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++E + L+ M+ G P+ +TLI GFC G+ +A ++ ++ +G + +V+TYN
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+GYCK ++ +L++ M + P VVTYNT+ L + +++ A+++ D M D
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY I+ C++ + A +L +R C + Y+ L++G+CK G+L+ A
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+ +P G PNV+T+NI++ C+ G+ A L DM KG +P+ VTFN L+
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 241 IRNNETSKVVELLHRMDE 258
R + +++L +M +
Sbjct: 355 CRKGLLGRAIDILEKMPQ 372
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 139/254 (54%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A +LL M+++G P+ ++ LI+ C G + RA ++ M +GC N ++YN L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G+CK K ++ ++ M+S+G P +VTYNT+ L + +VE A+++ +++ +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYNT IDGL K G +A +L +R + YS L+ GL + GK++ A +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F R+G+ PN VT+N ++ G C Q D+A D + M +G PN ++ L+ G
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 243 NNETSKVVELLHRM 256
+ +ELL+ +
Sbjct: 567 EGMAKEALELLNEL 580
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 138/260 (53%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A +LD M+QR P+ Y+ LI+ C + A +L M GC +VVTYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+NG CK ++E++ ++M S G +P V+T+N + + + A KL +M
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ T+N I+ LC+ G + A ++ + C+ +Y+ L+ G CK K++ A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
E + + G P++VTYN M+ C DG+++ A ++ + +KG +P +T+NT++ G
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 241 IRNNETSKVVELLHRMDERN 260
+ +T K ++LL M ++
Sbjct: 460 AKAGKTGKAIKLLDEMRAKD 479
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 35/291 (12%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A +LLD M RG P+ Y+ L++G C G +D A + M +GC NV+T+N ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVT------------------------------- 92
C T ++ L ++ML KG P+VVT
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 93 ----YNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELF 148
YN L HG + +++ A++ + M + TYNT + LCK+G + +A E+
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 149 RTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
L C + Y+ +IDGL K GK A +L + L P+ +TY+ ++ G +
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
G++D+A F + E G+ PN VTFN++MLG ++ +T + ++ L M R
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 144/292 (49%), Gaps = 38/292 (13%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A+++L+++ G P+ Y+ +I G+C GEI+ A + M ++ +VVTYNT++
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTIL 211
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
C + +++++ + ML + P V+TY L V HA+KL DEM+
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCEL------------------------ 158
+ TYN ++G+CK G + EA + + C+
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 159 -----------GIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
+ ++ LI+ LC+ G L A ++ + +P+ G PN ++YN ++HGFC
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
+ +MD+A + M ++G P+ VT+NT++ ++ + VE+L+++ +
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 35/227 (15%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ A +L+ M Q G +PN+ Y+ L+ GFC ++DRA E M GC ++VTYNT
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++ CK VE+++ + +++ SKG P ++TYNT+ GL + + A+KL DEM+ D
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF--------------------------RTLRVL 154
+ +T TY++ + GL + G + EA + F +T R +
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 155 K---------CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
C+ +Y+ LI+GL G + A EL L GLM
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 56 VTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDE 115
V N + +T ++EE M+ G P ++ TL G + + A K+ +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK 175
++ S + TYN I G CK G I A + + V + Y+ ++ LC GK
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGK 219
Query: 176 LETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
L+ A E+ + + P+V+TY I+I C D + A L +M +G P+ VT+N
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 236 LMLGCIRNNETSKVVELLHRM 256
L+ G + + ++ L+ M
Sbjct: 280 LVNGICKEGRLDEAIKFLNDM 300
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 69/125 (55%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A +LLD M + ++P+ YS+L+ G G++D A + F + G N VT+N+++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G CK++ + +++ M+++G +P +Y L GL + AL+L +E+ + +
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Query: 123 AETST 127
++S
Sbjct: 587 KKSSA 591
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 24 STLIDGFCLTG----EIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYS 79
S+ +GFCL E R +L VS +G + + + + + ++ ++ S
Sbjct: 8 SSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGS------RKRNRLVLVSAAS 61
Query: 80 EMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
++ S G+ + TL G + H + +S A E N + + + G
Sbjct: 62 KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSV-----NSSFALEDVESNNHLRQMVRTG 116
Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
+ E + + I + LI G C++GK A ++ + L G +P+V+TYN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
+MI G+C G+++ A + M V+P+ VT+NT++ + + + +E+L RM +R
Sbjct: 177 VMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 260 N 260
+
Sbjct: 234 D 234
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 131/238 (55%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
+ +LLD M G++PN ++Y+ I C +++ A ++F M +G + N+ TY+ +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+GYCKT +V ++ LY E+L + P VV + TL G + ++ A LF M V
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
YN I G CK+G ++EA L + L + Y+ LI+GLC ++ A
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
LFQ + + P+ TYN +IHG+C + M++A DL +M A GV PN +TF+TL+ G
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 141/258 (54%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M+EA ++ +LM + GV PN + YS +IDG+C TG + +A L+ + + + NVV + T
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L++G+CK +++ + +L+ M+ G+ P + YN L HG + + A+ L EM+ +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
++ + TY I+GLC + EA LF+ ++ + Y+ LI G CK +E A
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L + G+ PN++T++ +I G+CN + A L+ +M KG+ P+ VT+ L+
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 241 IRNNETSKVVELLHRMDE 258
+ + + L M E
Sbjct: 490 FKEANMKEALRLYSDMLE 507
Score = 144 bits (362), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 129/242 (53%)
Query: 18 PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
PN V+ TL+DGFC E+ AR LFV M G N+ YN LI+G+CK+ ++ E++ L
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 78 YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
SEM S + P V TY L +GL QV A +LF +M++ + ++TYN+ I G CK
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
+ +A +L + E I +S LIDG C + ++ A L+ + G++P+VVT
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
Y +I + M +A L+ DM G+ PN TF L+ G + S ++ +
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Query: 258 ER 259
++
Sbjct: 542 QQ 543
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 128/252 (50%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M EA LL M + P+ F Y+ LI+G C+ ++ A LF M + TYN+
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+GYCK ++E++L+L SEM + G+ P ++T++TL G + ++ A+ L+ EM
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TY ID K + EA L+ + ++CL+DG K G+L A
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAI 534
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+ +Q + N V + +I G C +G + +A F DM + G+ P+ ++ +++ G
Sbjct: 535 DFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH 594
Query: 241 IRNNETSKVVEL 252
++ + + L
Sbjct: 595 LQEKRITDTMML 606
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 117/240 (48%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A L M++ GV PN +VY+ LI G C +G + A L M+ +V TY LIN
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G C V E+ L+ +M ++ I P+ TYN+L HG + + +E AL L EM S V
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
T++T IDG C I A L+ + + + Y+ LID K ++ A L+
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRN 243
+ G+ PN T+ ++ GF +G++ A D + + + N V F L+ G +N
Sbjct: 503 SDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQN 562
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 117/248 (47%)
Query: 9 DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
LMI RG+ P+ +Y L G + +L M G NV Y I C+
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 69 KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
+EE+ ++ M G+ P + TY+ + G + V A L+ E+ +++ +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
T +DG CK +V A LF + + + Y+CLI G CK G + A L +
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
+ L P+V TY I+I+G C + Q+ +A+ LF M+ + + P+ T+N+L+ G + +
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 249 VVELLHRM 256
++L M
Sbjct: 428 ALDLCSEM 435
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M++A L M GV PN +STLIDG+C +I A L+ M I G + +VVTY
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+ + K +++E+L LYS+ML GI P T+ L G ++ ++ A+ + E
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ I+GLC+NGYI+ A+ F +R I +Y ++ G + ++
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC 230
L + + G++PN++ ++ + +G + A L K V+ +C
Sbjct: 605 MLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTVSNSC 654
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 11/243 (4%)
Query: 22 VYSTLIDGFCLTGEIDRA----RELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
V+S LI F G + A RE+ S D C+ +++NG + + +
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACL-------SILNGLVRRRRFDSVWVD 186
Query: 78 YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
Y M+S+G+ P V Y LF F+ KL DEM + Y +I LC+
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
+ + EA ++F ++ + YS +IDG CK G + A+ L++ + L+PNVV
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
+ ++ GFC ++ A LF+ M GV PN +N L+ G ++ + V LL M+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 258 ERN 260
N
Sbjct: 367 SLN 369
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Query: 18 PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
P++ ++++G D + M G + +V Y L K + L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 78 YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
EM S GI+P V Y L +++E A K+F+ M+ V TY+ IDG CK
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
G + +A L++ + V + + + L+DG CK +L TA LF + + G+ PN+
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM- 256
YN +IHG C G M +A L +ME+ ++P+ T+ L+ G ++ ++ L +M
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 257 DER 259
+ER
Sbjct: 402 NER 404
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 128/258 (49%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D A + M +R P+ + Y TL+DG C ID A L M GC + V YN
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G CK D+ L M KG P VTYNTL HGL +++ A+ L + M S
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
TY T I+GL K +A L ++ L YS LI GL K GK E A
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L++ + G PN+V Y++++ G C +G+ ++A ++ M A G PN T+++LM G
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 241 IRNNETSKVVELLHRMDE 258
+ + V++ MD+
Sbjct: 443 FKTGLCEEAVQVWKEMDK 460
Score = 150 bits (379), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 128/239 (53%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA LLD M G P+ +Y+ LIDG C G++ R +L +M + GC+ N VTYNT
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G C ++++++L M+S P VTY TL +GL + + A++L M+
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
Y+ I GL K G EA L+R + C+ I YS L+DGLC+ GK A
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
E+ + G +PN TY+ ++ GF G ++A ++ +M+ G + N ++ L+ G
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 38/297 (12%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ ++L+D M +G PN Y+TLI G CL G++D+A L M + C+ N VTY T
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 61 LINGYCKTK-----------------------------------DVEESLNLYSEMLSKG 85
LING K + EE+++L+ +M KG
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 86 IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
+P +V Y+ L GL + A ++ + M S TY++ + G K G EA
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
++++ + C YS LIDGLC +G+++ A ++ + +G+ P+ V Y+ +I G
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 206 CNDGQMDKAHDLFLDM---EAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
C G MD A L+ +M E P+ VT+N L+ G + S+ V+LL+ M +R
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 7/240 (2%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A RLL M +RG N +YS LI G G+ + A L+ M GC N+V Y+ L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G C+ E+ + + M++ G P TY++L G F+ E A++++ EM + +
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
Y+ IDGLC G + EA ++ + + + AYS +I GLC IG ++ A +L
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 183 F-----QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
+ Q P+ P+VVTYNI++ G C + +A DL M +G P+ +T NT +
Sbjct: 525 YHEMLCQEEPKS--QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Query: 37 DRARELFVSM-DINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKG----IRPTVV 91
D+A +LF M D C +V ++N+++N L Y +++ I P +
Sbjct: 129 DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188
Query: 92 TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTL 151
++N + L ++ V+ A+++F M + TY T +DGLCK I EA L +
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 152 RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQM 211
+ C Y+ LIDGLCK G L +L ++ G +PN VTYN +IHG C G++
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 212 DKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
DKA L M + PN VT+ TL+ G ++ + V LL M+ER
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%)
Query: 54 NVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLF 113
N +++N +I CK + V+ ++ ++ M + P TY TL GL + +++ A+ L
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
DEMQ + YN IDGLCK G + +L + + C Y+ LI GLC
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
GKL+ A L + + +PN VTY +I+G + A L ME +G N +
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 234 NTLMLGCIRNNETSKVVELLHRMDER 259
+ L+ G + + + + L +M E+
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEK 391
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 17/218 (7%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
+EA ++ M + G N F YS LIDG C G + A ++ M G + V Y+++
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 62 INGYCKTKDVEESLNLYSEMLSK---GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
I G C ++ +L LY EML + +P VVTYN L GL + A+ L + M
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
+ T NTF++ L + C+ G L+ L K ++
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSN--------------SCDKGRSFLEELVVRLLKRQRVSG 614
Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
A + + + L P T+ +++ C +++ A D
Sbjct: 615 ACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 141/260 (54%), Gaps = 1/260 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DE ++ M++ V PN + Y+ +++G+C G ++ A + + G + TY +
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI GYC+ KD++ + +++EM KG R V Y L HGL +++ A+ LF +M+ +
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
TY I LC + EA L + + + I Y+ LID LC K E A
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
EL + GLMPNV+TYN +I+G+C G ++ A D+ ME++ ++PN T+N L+ G
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 241 IRNNETSKVVELLHRMDERN 260
++N K + +L++M ER
Sbjct: 439 CKSN-VHKAMGVLNKMLERK 457
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 133/254 (52%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A +L+ M++R V P+ Y++LIDG C +G D A L M+ G + + TY ++I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ CK+K VEE+ +L+ + KG+ P VV Y L G + +V+ A + ++M +
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ T+N I GLC +G + EA L + + + + + LI L K G + A+
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
FQ + G P+ TY I +C +G++ A D+ M GV+P+ T+++L+ G
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 243 NNETSKVVELLHRM 256
+T+ ++L RM
Sbjct: 685 LGQTNFAFDVLKRM 698
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D A ++ + M +G R N Y+ LI G C+ ID A +LFV M + C V TY
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI C ++ E+LNL EM GI+P + TY L L + E A +L +M
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK---------------CELGIE---- 161
+ TYN I+G CK G I +A ++ + K C+ +
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG 448
Query: 162 ---------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC 206
Y+ LIDG C+ G ++A+ L + GL+P+ TY MI C
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 207 NDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
++++A DLF +E KGV PN V + L+ G + + + +L +M +N
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 1/258 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A +++LM R + PN Y+ LI G+C + +A + M + +VVTYN+
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G C++ + + + L S M +G+ P TY ++ L + +VE A LFD ++
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V Y IDG CK G + EA + + C ++ LI GLC GKL+ A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + ++GL P V T I+IH DG D A+ F M + G P+ T+ T +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 241 IRNNETSKVVELLHRMDE 258
R +++ +M E
Sbjct: 648 CREGRLLDAEDMMAKMRE 665
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 122/236 (51%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D A RLL LM RG+ P+ + Y+++ID C + ++ A +LF S++ G NVV Y L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+GYCK V+E+ + +MLSK P +T+N L HGL +++ A L ++M +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
ST I L K+G A F+ + + Y+ I C+ G+L A +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
+ + G+ P++ TY+ +I G+ + GQ + A D+ M G P+ TF +L+
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 57/308 (18%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA L D + Q+GV PN +Y+ LIDG+C G++D A + M C+ N +T+N
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G C ++E+ L +M+ G++PTV T L H L + +HA F +M S
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGK----- 175
+ TY TFI C+ G +++A ++ +R + YS LI G +G+
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 176 ------------------------------------------------LETAWELFQSLP 187
+T EL + +
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA-KGVAPNCVTFNTLMLGCI---RN 243
+ PN +Y +I G C G + A +F M+ +G++P+ + FN L+ C ++
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 244 NETSKVVE 251
NE +KVV+
Sbjct: 813 NEAAKVVD 820
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 19/256 (7%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A ++ M + GV P+ F YS+LI G+ G+ + A ++ M GC + T+ +LI
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 63 N-----GYCKTKDVEESL-------------NLYSEMLSKGIRPTVVTYNTLFHGLFEIH 104
Y K K E L L +M+ + P +Y L G+ E+
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Query: 105 QVEHALKLFDEMQHSD-VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAY 163
+ A K+FD MQ ++ ++ +N + CK EAA++ + + +E+
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
LI GL K G+ E +FQ+L + G + + + I+I G G ++ ++LF ME
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Query: 224 KGVAPNCVTFNTLMLG 239
G + T++ L+ G
Sbjct: 895 NGCKFSSQTYSLLIEG 910
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYNT 60
D LL+ M++ V PNA Y LI G C G + A ++F M N G + + +N
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L++ CK K E+ + +M+ G P + + L GL++ + E +F +
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDG 169
+ + IDG+ K G + ELF + C+ + YS LI+G
Sbjct: 862 YYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 56/103 (54%)
Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
LK +L I Y+ L++ L + G ++ +++ + + PN+ TYN M++G+C G +++
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236
Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
A+ + G+ P+ T+ +L++G + + ++ + M
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 135/244 (55%), Gaps = 1/244 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
MD A + M+++G+ PN F YS LIDGF + A ++ M+ + N V YNT
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNT 559
Query: 61 LINGYCKTKDVEESLNLYSEMLS-KGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
+ING CK ++ + ++ K + +YN++ G ++ + A++ + EM +
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619
Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
+ T+ + I+G CK+ + A E+ ++ ++ +L + AY LIDG CK ++TA
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679
Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+ LF LP +GLMPNV YN +I GF N G+MD A DL+ M G++ + T+ T++ G
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 240 CIRN 243
+++
Sbjct: 740 LLKD 743
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 124/230 (53%), Gaps = 1/230 (0%)
Query: 30 FCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPT 89
FC G++D A M+ G NVV YN ++ +C+ K+++ + +++SEML KG+ P
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 90 VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
TY+ L G F+ ++A + ++M S+ A YNT I+GLCK G +A E+ +
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 150 TL-RVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCND 208
L + + + +Y+ +IDG K+G ++A E ++ + G PNVVT+ +I+GFC
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Query: 209 GQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
+MD A ++ +M++ + + + L+ G + N+ L + E
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 136/263 (51%), Gaps = 8/263 (3%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D A M + G PN +++LI+GFC + +D A E+ M ++ Y L
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G+CK D++ + L+SE+ G+ P V YN+L G + +++ A+ L+ +M + +
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEA----YSCLIDGLCKIGKLE 177
+ + TY T IDGL K+G I A++L+ L +LGI + L++GL K G+
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSEL----LDLGIVPDEILHMVLVNGLSKKGQFL 782
Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
A ++ + + + + PNV+ Y+ +I G +G +++A L +M KG+ + FN L+
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Query: 238 LGCIRNNETSKVVELLHRMDERN 260
G + + + L + R+
Sbjct: 843 SGRVEKPPAASKISSLASPEMRS 865
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 128/256 (50%), Gaps = 1/256 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M+EA R++D M+ G+ + ++L++G+C E+ +A +LF M+ G + V ++
Sbjct: 326 MEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++ +CK ++E+++ Y M S I P+ V +T+ G + E AL++F++ S
Sbjct: 386 MVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESW 445
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+A F+ CK G + A + + E + Y+ ++ C++ ++ A
Sbjct: 446 IAHGFMCNKIFL-LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLAR 504
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+F + GL PN TY+I+I GF + A D+ M A N V +NT++ G
Sbjct: 505 SIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564
Query: 241 IRNNETSKVVELLHRM 256
+ +TSK E+L +
Sbjct: 565 CKVGQTSKAKEMLQNL 580
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 124/255 (48%), Gaps = 1/255 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
MD A LM+ R V P + ++ + ID A+E++ M + G + VT
Sbjct: 185 MDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQL 244
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
L+ + + EE++ ++ ++S+G P + ++ + + AL L EM+
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304
Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
V A TY + I K G + EA + + + + A + L++G CK +L A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+LF + GL P+ V +++M+ FC + +M+KA + ++ M++ +AP+ V +T++ G
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 240 CIRNNETSKVVELLH 254
C++ +E+ +
Sbjct: 425 CLKAESPEAALEIFN 439
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 18 PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
P AF Y L++ + +D A + F M + V N +++ ++ ++E+ +
Sbjct: 169 PRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEI 226
Query: 78 YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
Y++M+ G+ VT L + E A+K+F + + ++ + CK
Sbjct: 227 YNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACK 286
Query: 138 NGYIVEAAELFRTLR-VLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
+V A +L R +R L E Y+ +I K G +E A + + G+ +V+
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVI 346
Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
+++G+C ++ KA DLF ME +G+AP+ V F+ ++ +N E K +E RM
Sbjct: 347 AATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406
Score = 34.7 bits (78), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 157 ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHD 216
EL A++ L++ + +++ A + F + ++P V N ++ +D+A +
Sbjct: 166 ELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKE 225
Query: 217 LFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
++ M GVA + VT LM +R + + V++ R+ R
Sbjct: 226 IYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSR 268
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 132/253 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
MDEA L M++ G++PNAF Y I G+ E A + M G + N V
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LIN YCK V E+ + Y M+ +GI TY L +GLF+ +V+ A ++F EM+
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+A + +Y I+G K G + +A+ +F + + Y+ L+ G C+ G++E A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
EL + GL PN VTY +I G+C G + +A LF +M+ KG+ P+ + TL+ GC
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 241 IRNNETSKVVELL 253
R N+ + + +
Sbjct: 743 CRLNDVERAITIF 755
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 144/266 (54%), Gaps = 9/266 (3%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M +AS + D M++ G+ PN +Y+ L+ GFC +GEI++A+EL M + G N VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+GYCK+ D+ E+ L+ EM KG+ P Y TL G ++ VE A+ +F +
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG- 761
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL------RVLKCELGIEAYSCLIDGLCKIG 174
A+ T+ +N I+ + K G E+ L R K Y+ +ID LCK G
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN--DVTYNIMIDYLCKEG 819
Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
LE A ELF + LMP V+TY +++G+ G+ + +F + A G+ P+ + ++
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 235 TLMLGCIRNNETSKVVELLHRMDERN 260
++ ++ T+K + L+ +M +N
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKN 905
Score = 144 bits (364), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 129/254 (50%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A R+L M ++G+ P+ F Y++LI G +D AR V M NG N TY I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+GY + + + EM G+ P V L + + +V A + M +
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ TY ++GL KN + +A E+FR +R + +Y LI+G K+G ++ A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F + GL PNV+ YN+++ GFC G+++KA +L +M KG+ PN VT+ T++ G +
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 243 NNETSKVVELLHRM 256
+ + ++ L M
Sbjct: 710 SGDLAEAFRLFDEM 723
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 130/257 (50%), Gaps = 2/257 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D A ++ MI G RPN +Y+TLI F A + M G ++ YN+
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G K K ++E+ + EM+ G++P TY G E + A K EM+
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELG-IEAYSCLIDGLCKIGKLETA 179
V I+ CK G ++EA +R++ V + LG + Y+ L++GL K K++ A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
E+F+ + G+ P+V +Y ++I+GF G M KA +F +M +G+ PN + +N L+ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 240 CIRNNETSKVVELLHRM 256
R+ E K ELL M
Sbjct: 672 FCRSGEIEKAKELLDEM 688
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 7/244 (2%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A + M +G+ P+ F Y LI+GF G + +A +F M G NV+ YN
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+ G+C++ ++E++ L EM KG+ P VTY T+ G + + A +LFDEM+
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ ++ Y T +DG C+ + A +F T + C ++ LI+ + K GK E
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKT 786
Query: 181 ELFQ-----SLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
E+ S R G PN VTYNIMI C +G ++ A +LF M+ + P +T+ +
Sbjct: 787 EVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 236 LMLG 239
L+ G
Sbjct: 846 LLNG 849
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 37/294 (12%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M++A L D MI G+ P A Y++LI+G+C + + EL V M + + TY T
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++ G C + D++ + N+ EM++ G RP VV Y TL + + A+++ EM+
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 121 VAAETSTYNTFIDGLCK------------------------------NGYIVEAAELFRT 150
+A + YN+ I GL K +GYI EA+E
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI-EASEFASA 541
Query: 151 LRVLK--CELGIEAYSCLIDGL----CKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
+ +K E G+ L GL CK GK+ A ++S+ G++ + TY ++++G
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 205 FCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
+ ++D A ++F +M KG+AP+ ++ L+ G + K + M E
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 124/258 (48%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D A +L + MI +G+ P + Y LIDG C ++ A+ L V MD G + TY+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G K ++ + + L EM+S GI Y+ + + +E A LFD M S
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + Y + I+G C+ + + EL ++ + Y ++ G+C G L+ A+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+ + + G PNVV Y +I F + + A + +M+ +G+AP+ +N+L++G
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 241 IRNNETSKVVELLHRMDE 258
+ + L M E
Sbjct: 498 SKAKRMDEARSFLVEMVE 515
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%)
Query: 36 IDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
+D A +L SM G + TY+ LI+G CK K +E++ +L EM S G+ TY+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 96 LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
L GL + + A L EM + + Y+ I + K G + +A LF +
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
+AY+ LI+G C+ + +EL + + ++ + TY ++ G C+ G +D A+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
++ +M A G PN V + TL+ ++N+ + +L M E+
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 45/250 (18%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMH------- 53
+ EA RL D M +G+ P++FVY+TL+DG C +++RA +F + GC
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNA 771
Query: 54 --------------------------------NVVTYNTLINGYCKTKDVEESLNLYSEM 81
N VTYN +I+ CK ++E + L+ +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 82 LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
+ + PTV+TY +L +G ++ + +FDE + + + Y+ I+ K G
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 142 VEAAELFRTLRVLK-----CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
+A L + C+L I L+ G K+G++E A ++ +++ R+ +P+
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Query: 197 TYNIMIHGFC 206
T +I+ C
Sbjct: 952 TVIELINESC 961
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 21/267 (7%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G + ++ L DG+ G I+ A +F S + + L++ + ++
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHG-------------LFEIHQ--------VEHALKLF 113
++Y M+ + + V TY+ L LF+ + V+ ALKL
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 114 DEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKI 173
+ M + TY+ IDGLCK + +A L + L L YS LIDGL K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 174 GKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTF 233
+ A L + G+ Y+ I +G M+KA LF M A G+ P +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 234 NTLMLGCIRNNETSKVVELLHRMDERN 260
+L+ G R + ELL M +RN
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRN 412
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 154 bits (388), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 136/251 (54%), Gaps = 3/251 (1%)
Query: 3 EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
EA+R L + M RG+ P+ Y+++IDGF G +D F M C +V+TYN L
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
IN +CK + L Y EM G++P VV+Y+TL + ++ A+K + +M+ +
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
TY + ID CK G + +A L + + E + Y+ LIDGLC +++ A E
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-- 239
LF + G++PN+ +YN +IHGF MD+A +L +++ +G+ P+ + + T + G
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 240 CIRNNETSKVV 250
+ E +KVV
Sbjct: 519 SLEKIEAAKVV 529
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 134/259 (51%), Gaps = 1/259 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A RL + M+Q GV N Y+ LIDG C + A ELF MD G + N+ +YN
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G+ K K+++ +L L +E+ +GI+P ++ Y T GL + ++E A + +EM+
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ A + Y T +D K+G E L ++ L E+ + + LIDGLCK + A
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 181 ELFQSLPR-VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+ F + GL N + MI G C D Q++ A LF M KG+ P+ + +LM G
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 240 CIRNNETSKVVELLHRMDE 258
+ + + L +M E
Sbjct: 658 NFKQGNVLEALALRDKMAE 676
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 35/294 (11%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA + M + V P + L+ F G+ D + F M G V TYN
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+ CK DVE + L+ EM +G+ P VTYN++ G ++ +++ + F+EM+
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TYN I+ CK G + E +R ++ + + +YS L+D CK G ++ A
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 181 ELFQSLPRVGLMP-----------------------------------NVVTYNIMIHGF 205
+ + + RVGL+P NVVTY +I G
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
C+ +M +A +LF M+ GV PN ++N L+ G ++ + +ELL+ + R
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 119/241 (49%)
Query: 18 PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
P+ Y+ LI+ FC G++ E + M NG NVV+Y+TL++ +CK +++++
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 78 YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
Y +M G+ P TY +L +I + A +L +EM V TY IDGLC
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
+ EA ELF + + +Y+ LI G K ++ A EL L G+ P+++
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMD 257
Y I G C+ +++ A + +M+ G+ N + + TLM ++ ++ + LL M
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 258 E 258
E
Sbjct: 570 E 570
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 120/246 (48%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M G++PN YSTL+D FC G + +A + +V M G + N TY +LI+ CK +
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
+ ++ L +EML G+ VVTY L GL + +++ A +LF +M + V ++YN
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
I G K + A EL L+ + + Y I GLC + K+E A + + G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
+ N + Y ++ + G + L +M+ + VTF L+ G +N SK V
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 251 ELLHRM 256
+ +R+
Sbjct: 598 DYFNRI 603
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
MD A LL+ + RG++P+ +Y T I G C +I+ A+ + M G N + Y T
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTY--------------------------- 93
L++ Y K+ + E L+L EM I TVVT+
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 94 ---------NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
+ GL + +QVE A LF++M + + + Y + +DG K G ++EA
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
L + + +L + AY+ L+ GL +L+ A + + G+ P+ V
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%)
Query: 88 PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
P ++ LF L ++ +E A++ F +M+ V +T + N + K G +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 148 FRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
F+ + + Y+ +ID +CK G +E A LF+ + GL+P+ VTYN MI GF
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
G++D F +M+ P+ +T+N L+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 81 MLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET-----STYNTFIDG- 134
M G + +V +Y + H LF A + EM S + ST N + G
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 135 ---------LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
L G + EA + F ++ + + + L+ K+GK + F+
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+ G P V TYNIMI C +G ++ A LF +M+ +G+ P+ VT+N+++ G
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G++ NA +++ +IDG C +++ A LF M G + + Y +L++G K +V E+
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
L L +M G++ ++ Y +L GL +Q++ A +EM + + + +
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 135 LCKNGYIVEAAEL 147
+ G I EA EL
Sbjct: 728 HYELGCIDEAVEL 740
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 125/227 (55%), Gaps = 1/227 (0%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA + + MIQR V PN Y++LI+G C+ G +D A+++ + G N VTYNTLI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NGYCK K V++ + + M G+ TYNTL+ G + + A K+ M V
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ T+N +DGLC +G I +A L+ K +GI Y+ +I GLCK K+E AW L
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK-GVAP 228
F SL G+ P+V+TY M+ G +AH+L+ M+ + G+ P
Sbjct: 452 FCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 141/259 (54%), Gaps = 4/259 (1%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
++R+L M++ G+ P+ +S LID + G++ A++ + M N+VTYN+LIN
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G C ++E+ + + ++SKG P VTYNTL +G + +V+ +K+ M V
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS--CLIDGLCKIGKLETAWE 181
+T TYNT G C+ G A ++ R++ C + + Y+ L+DGLC GK+ A
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLG--RMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
+ L + + ++TYNI+I G C +++ A LF + KGV+P+ +T+ T+M+G
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 242 RNNETSKVVELLHRMDERN 260
R + EL +M + +
Sbjct: 476 RKRLWREAHELYRKMQKED 494
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%)
Query: 8 LDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCK 67
L M++ G P+ + +L++GFC A L + G NVV YNT+I+ C+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 68 TKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETST 127
V +L++ M GIRP VVTYN+L LF + ++ +M ++ + T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 128 YNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLP 187
++ ID K G ++EA + + + I Y+ LI+GLC G L+ A ++ L
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 188 RVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETS 247
G PN VTYN +I+G+C ++D + M GV + T+NTL G + + S
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 248 KVVELLHRM 256
++L RM
Sbjct: 377 AAEKVLGRM 385
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L+D ++ G PN +Y+T+ID C G+++ A ++ M G +VVTYN+LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ S + S+M+ GI P V+T++ L + Q+ A K ++EM V
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TYN+ I+GLC +G + EA ++ L Y+ LI+G CK +++ ++
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ R G+ + TYN + G+C G+ A + M + GV P+ TFN L+ G
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 243 NNETSKVVELLHRMDE 258
+ + K + L + +
Sbjct: 407 HGKIGKALVRLEDLQK 422
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEES 74
G+ + + ++TLID FC + A M G ++VT+ +L+NG+C E+
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 75 LNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDG 134
++L +++ G P VV YNT+ L E QV AL + M+ + + TYN+ I
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 135 LCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPN 194
L +G +A + + + + +S LID K G+L A + + + + + PN
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 195 VVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+VTYN +I+G C G +D+A + + +KG PN VT+NTL+ G
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 124/239 (51%), Gaps = 3/239 (1%)
Query: 18 PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
P+ +S L+ + + LF +++ G H++ ++ TLI+ +C+ + +L+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 78 YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
+M+ G P++VT+ +L +G +++ A+ L D++ YNT ID LC+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
G + A ++ + ++ + + Y+ LI L G + + + R+G+ P+V+T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG-CIRN--NETSKVVELL 253
++ +I + +GQ+ +A + +M + V PN VT+N+L+ G CI +E KV+ +L
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 83/165 (50%)
Query: 73 ESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFI 132
++L L+ +M P++V ++ L + ++++ E + LF ++ ++ + ++ T I
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 133 DGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLM 192
D C+ + A + L E I + L++G C + + A L + +G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 193 PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
PNVV YN +I C GQ++ A D+ M+ G+ P+ VT+N+L+
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 96 LFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLK 155
L GL I + AL LF +M S ++ + + K LFR L +L
Sbjct: 51 LRSGLHSI-KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG 109
Query: 156 CELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH 215
+ +++ LID C+ +L A + ++G P++VT+ +++GFC+ + +A
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 216 DLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
L + G PN V +NT++ + + +++L M +
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA LD M++RG++P+ + YS LI G +++ A + + NG + +V TY+
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I+G CK + EE + EM+SK ++P V YN L ++ AL+L ++M+H
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
++ ++TY + I G+ + EA LF +R+ E + Y+ LIDG K+G++
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + + PN +TY +MI G+ DG + +A L +M KG+ P+ +T+ + G
Sbjct: 749 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808
Query: 241 IRNNETSKVVELLHRMDERN 260
++ V+E DE N
Sbjct: 809 LKQG---GVLEAFKGSDEEN 825
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 133/259 (51%), Gaps = 3/259 (1%)
Query: 5 SRLLDLMIQ---RGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
S+ L+L Q +G + + L+ G C G++D A + + GC+ + V+YNTL
Sbjct: 500 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 559
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G C K ++E+ EM+ +G++P TY+ L GLF +++VE A++ +D+ + + +
Sbjct: 560 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 619
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+ TY+ IDG CK E E F + + Y+ LI C+ G+L A E
Sbjct: 620 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 679
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
L + + G+ PN TY +I G ++++A LF +M +G+ PN + L+ G
Sbjct: 680 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 739
Query: 242 RNNETSKVVELLHRMDERN 260
+ + KV LL M +N
Sbjct: 740 KLGQMVKVECLLREMHSKN 758
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 124/259 (47%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA R+ ++ RG + Y+TLI G C ++D A M G + TY+
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 593
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI G VEE++ + + G+ P V TY+ + G + + E + FDEM +
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V T YN I C++G + A EL ++ Y+ LI G+ I ++E A
Sbjct: 654 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 713
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
LF+ + GL PNV Y +I G+ GQM K L +M +K V PN +T+ ++ G
Sbjct: 714 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 773
Query: 241 IRNNETSKVVELLHRMDER 259
R+ ++ LL+ M E+
Sbjct: 774 ARDGNVTEASRLLNEMREK 792
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 35/294 (11%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA +L M + GV PN ++T+IDG + G D A M G ++TY+
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+ G + K + ++ + EM KG P V+ YN L E + A+++ D M
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAEL---------------FRTLRVLKC--------- 156
++ +STYNT I G CKNG A L F ++ L C
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468
Query: 157 -----------ELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
G + LI GLCK GK A EL+ G + + T N ++HG
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
C G++D+A + ++ +G + V++NTL+ GC + + L M +R
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 35/294 (11%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM-----DIN-GCMHN 54
+++A + DLM+ +G+ + Y+TLI G+C G+ D A L M ++N G +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 55 VVT-----------------------------YNTLINGYCKTKDVEESLNLYSEMLSKG 85
V+ TLI+G CK ++L L+ + L+KG
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 86 IRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
T N L HGL E +++ A ++ E+ + +YNT I G C + EA
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
+ + YS LI GL + K+E A + + R G++P+V TY++MI G
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633
Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
C + ++ + F +M +K V PN V +N L+ R+ S +EL M +
Sbjct: 634 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 4/234 (1%)
Query: 26 LIDGFCLTGEIDR---ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEML 82
LI+ +C + D A ++F + G + T N L+ + + ++ + +++
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVV 265
Query: 83 SKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIV 142
KG+ P V + T + + +VE A+KLF +M+ + VA T+NT IDGL G
Sbjct: 266 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 325
Query: 143 EAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMI 202
EA + E + YS L+ GL + ++ A+ + + + + G PNV+ YN +I
Sbjct: 326 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 385
Query: 203 HGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
F G ++KA ++ M +KG++ T+NTL+ G +N + LL M
Sbjct: 386 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 439
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA L + M G+ PN F Y+ LIDG+ G++ + L M N +TY
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 768
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I GY + +V E+ L +EM KGI P +TY +G + V A K DE ++
Sbjct: 769 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 828
Query: 121 V 121
+
Sbjct: 829 I 829
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 109 ALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLID 168
AL +F + + + +T N + L + + E F + + ++ I+
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAIN 281
Query: 169 GLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAP 228
CK GK+E A +LF + G+ PNVVT+N +I G G+ D+A M +G+ P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 229 NCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
+T++ L+ G R +L M ++
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKK 372
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 130/256 (50%), Gaps = 8/256 (3%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
MD A +L M + + PN YST+IDGF G D A LF M G + V+YNT
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L++ Y K EE+L++ EM S GI+ VVTYN L G + + + K+F EM+
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V TY+T IDG K G EA E+FR + + YS LID LCK G + +A
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + G+ PNVVTYN +I F MD++ D G P F++ L
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS----ADYSNGGSLP----FSSSALSA 621
Query: 241 IRNNETSKVVELLHRM 256
+ E ++V++L ++
Sbjct: 622 LTETEGNRVIQLFGQL 637
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 1/236 (0%)
Query: 3 EASR-LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
EA+R L D M R + + F Y+TL+D C G++D A E+ M + M NVV+Y+T+
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G+ K +E+LNL+ EM GI V+YNTL ++ + E AL + EM +
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+ TYN + G K G E ++F ++ + YS LIDG K G + A E
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
+F+ GL +VV Y+ +I C +G + A L +M +G++PN VT+N+++
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 143/262 (54%), Gaps = 11/262 (4%)
Query: 2 DEASRLLDLMIQRGVRPN--AFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
D+A + ++R R N + S +I G++ A+ +F + G + V ++
Sbjct: 213 DKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFS 272
Query: 60 TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLF----HGLFEIHQVEHALKLFDE 115
LI+ Y ++ EE++++++ M G+RP +VTYN + G E QV K FDE
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA---KFFDE 329
Query: 116 MQHSDVAAETSTYNTFIDGLCKNGYIVEAAE-LFRTLRVLKCELGIEAYSCLIDGLCKIG 174
MQ + V + T+N+ + +C G + EAA LF + + E + +Y+ L+D +CK G
Sbjct: 330 MQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 175 KLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
+++ A+E+ +P +MPNVV+Y+ +I GF G+ D+A +LF +M G+A + V++N
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 235 TLMLGCIRNNETSKVVELLHRM 256
TL+ + + + +++L M
Sbjct: 449 TLLSIYTKVGRSEEALDILREM 470
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 132/254 (51%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+ ++ D M + GV+P+ +++L+ G + AR LF M +V +YNTL+
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+ CK ++ + + ++M K I P VV+Y+T+ G + + + AL LF EM++ +A
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ +YNT + K G EA ++ R + + + + Y+ L+ G K GK + ++
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
F + R ++PN++TY+ +I G+ G +A ++F + ++ G+ + V ++ L+ +
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 243 NNETSKVVELLHRM 256
N V L+ M
Sbjct: 562 NGLVGSAVSLIDEM 575
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
+ I L + G + A +F T + A+S LI + G E A +F S+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 189 VGLMPNVVTYNIMIHGFCNDGQMD--KAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
GL PN+VTYN +I C G M+ + F +M+ GV P+ +TFN+L+ C R
Sbjct: 297 YGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 247 SKVVELLHRMDER 259
L M R
Sbjct: 356 EAARNLFDEMTNR 368
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 164 SCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEA 223
S +I L + GK+ A +F++ G V ++ +I + G ++A +F M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 224 KGVAPNCVTFNTLMLGCIRNN-ETSKVVELLHRMDERN 260
G+ PN VT+N ++ C + E +V + M +RN
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRN 333
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 131/236 (55%)
Query: 4 ASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLIN 63
A L + M+ G+RP+ ++Y+ +I C ++ RA+E+ M+ GC N+V YN LI+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 64 GYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAA 123
G CK + V E++ + ++ K ++P VVTY TL +GL ++ + E L++ DEM +
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 124 ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELF 183
+ ++ ++GL K G I EA L + + + Y+ LID LCK K A LF
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 184 QSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+ ++GL PN VTY+I+I FC G++D A +M G+ + +N+L+ G
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L D M + G+RPN YS LID FC G++D A M G +V YN+LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+CK D+ + +EM++K + PTVVTY +L G ++ AL+L+ EM +A
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
T+ T + GL + G I +A +LF + + Y+ +I+G C+ G + A+E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNC----VTFNTLML 238
+ + G++P+ +Y +IHG C GQ +A +F+D KG NC + + L+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKG---NCELNEICYTGLLH 620
Query: 239 GCIRNNETSKVVELLHRMDER 259
G R + + + + M +R
Sbjct: 621 GFCREGKLEEALSVCQEMVQR 641
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 132/258 (51%), Gaps = 3/258 (1%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA L+ ++ GV PN FVY+ LID C + A LF M G N VTY+
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+ +C+ ++ +L+ EM+ G++ +V YN+L +G + + A EM +
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ TY + + G C G I +A L+ + I ++ L+ GL + G + A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG- 239
+LF + + PN VTYN+MI G+C +G M KA + +M KG+ P+ ++ L+ G
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 240 CI--RNNETSKVVELLHR 255
C+ + +E V+ LH+
Sbjct: 588 CLTGQASEAKVFVDGLHK 605
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 142/296 (47%), Gaps = 39/296 (13%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M +A L M ++G+ P+ + Y LI G CLTG+ A+ + C N + Y
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHG-------------LFEIHQ-- 105
L++G+C+ +EE+L++ EM+ +G+ +V Y L G L E+H
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 106 --------------------VEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
+ A ++D M + TY I+GLCK G++ EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGK--LETAWELFQSLPRVGLMPNVVTYNIMIH 203
L ++ + Y C +D L K G+ ++ A EL ++ + GL+ N TYN++I
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILK-GLLANTATYNMLIR 795
Query: 204 GFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
GFC G++++A +L M GV+P+C+T+ T++ R N+ K +EL + M E+
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 35/272 (12%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D A L M+ G++ + + Y++LI+G C G+I A M VVTY +
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+ GYC + ++L LY EM KGI P++ T+ TL GLF + A+KLF+EM +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL------------RVL-------------- 154
V TYN I+G C+ G + +A E + + R L
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 155 ---------KCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
CEL Y+ L+ G C+ GKLE A + Q + + G+ ++V Y ++I G
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
L +M +G+ P+ V + +++
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 120/230 (52%), Gaps = 2/230 (0%)
Query: 7 LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
LL M RG++P+ +Y+++ID TG+ A ++ M GC+ N VTY +ING C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 67 KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHSDVAAET 125
K V E+ L S+M P VTY L + ++ A++L + + + A T
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG-LLANT 787
Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQS 185
+TYN I G C+ G I EA+EL + Y+ +I+ LC+ ++ A EL+ S
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNT 235
+ G+ P+ V YN +IHG C G+M KA +L +M +G+ PN T T
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 117/253 (46%)
Query: 7 LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
++D M+ P+ S+L++G G+I+ A L + G N+ YN LI+ C
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 67 KTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS 126
K + E+ L+ M G+RP VTY+ L +++ AL EM + +
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
YN+ I+G CK G I A + K E + Y+ L+ G C GK+ A L+ +
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
G+ P++ T+ ++ G G + A LF +M V PN VT+N ++ G +
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 247 SKVVELLHRMDER 259
SK E L M E+
Sbjct: 559 SKAFEFLKEMTEK 571
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 108/239 (45%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A RL M +G+ P+ + ++TL+ G G I A +LF M N VTYN
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I GYC+ D+ ++ EM KGI P +Y L HGL Q A D + +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
Y + G C+ G + EA + + + +L + Y LIDG K + +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
L + + GL P+ V Y MI G +A ++ M +G PN VT+ ++ G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 105/239 (43%)
Query: 18 PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNL 77
P S L+ G A ELF M G +V Y +I C+ KD+ + +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 78 YSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCK 137
+ M + G +V YN L GL + +V A+ + ++ D+ + TY T + GLCK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 138 NGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVT 197
E+ + L+ A S L++GL K GK+E A L + + G+ PN+
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 198 YNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
YN +I C + +A LF M G+ PN VT++ L+ R + + L M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 35/180 (19%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMD--------------- 47
EA + DLMI G PN Y+ +I+G C G ++ A L M
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 48 --------------------INGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIR 87
+ G + N TYN LI G+C+ +EE+ L + M+ G+
Sbjct: 760 DILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819
Query: 88 PTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAEL 147
P +TY T+ + L + V+ A++L++ M + + YNT I G C G + +A EL
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EAS L+ MI GV P+ Y+T+I+ C ++ +A EL+ SM G + V YNT
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNT 95
LI+G C ++ ++ L +EML +G+ P T T
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 186 LPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNE 245
+ +V L+P V T + ++HG A +LF DM + G+ P+ + ++ +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 246 TSKVVELLHRMD 257
S+ E++ M+
Sbjct: 243 LSRAKEMIAHME 254
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 143/310 (46%), Gaps = 51/310 (16%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M+ A L + M + G+ + + Y+ ++D FC G I++AR+ F M GC NVVTY
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM---- 116
LI+ Y K K V + L+ MLS+G P +VTY+ L G + QVE A ++F+ M
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 117 ----------QHSDVAAETS--TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS 164
Q+ D + + TY +DG CK+ + EA +L + + CE Y
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 165 CLIDGLCKIGKLETAWELFQSLPRVGL--------------------------------- 191
LIDGLCK+GKL+ A E+ + G
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 192 --MPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKV 249
PNVV Y MI G C G+ D+A+ L ME KG PN VT+ ++ G +
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 250 VELLHRMDER 259
+ELL RM +
Sbjct: 799 LELLERMGSK 808
Score = 147 bits (371), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 115/206 (55%)
Query: 17 RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
RPN Y L+DGFC + ++ AR+L +M + GC N + Y+ LI+G CK ++E+
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 77 LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
+ +EM G T+ TY++L F++ + + A K+ +M + A Y IDGLC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
K G EA +L + + C+ + Y+ +IDG IGK+ET EL + + G+ PN V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDME 222
TY ++I C +G +D AH+L +M+
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D AS++L M++ PN +Y+ +IDG C G+ D A +L M+ GC NVVTY +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I+G+ +E L L M SKG+ P VTY L + ++ A L +EM+ +
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
T+ Y I+G N +E+ L + + Y LID L K +LE A
Sbjct: 846 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 182 LFQSLPRVG--LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
L + + L+ TYN +I C +++ A LF +M KGV P +F +L+ G
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963
Query: 240 CIRNNETSKVVELL 253
RN++ S+ + LL
Sbjct: 964 LFRNSKISEALLLL 977
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 57/308 (18%)
Query: 6 RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
R+L++M+ G P+ ++++L+ +C +G+ A +L M G M V YN LI
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 66 CKTKD-----------------------------------------VEESLNLYSEMLSK 84
C KD E++ ++ EM+ +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 85 GIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEA 144
G P TY+ + + L ++E A LF+EM+ + A+ TY +D CK G I +A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 145 AELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHG 204
+ F +R + C + Y+ LI K K+ A ELF+++ G +PN+VTY+ +I G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 205 FCNDGQMDKAHDLF-----------LDMEAK-----GVAPNCVTFNTLMLGCIRNNETSK 248
C GQ++KA +F +DM K PN VT+ L+ G +++ +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 249 VVELLHRM 256
+LL M
Sbjct: 658 ARKLLDAM 665
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 19/268 (7%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
++A ++ MI +G P+ YS +++ C +++ A LF M G + +V TY +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
++ +CK +E++ ++EM G P VVTY L H + +V +A +LF+ M
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTL----RVLKCEL------------GIEAYSC 165
TY+ IDG CK G + +A ++F + V ++ + Y
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 166 LIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
L+DG CK ++E A +L ++ G PN + Y+ +I G C G++D+A ++ +M G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 226 VAPNCVTFNTLM---LGCIRNNETSKVV 250
T+++L+ R + SKV+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVL 732
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 16/274 (5%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D A + M+ GV N S+ C G+ ++A + M G + + TY+
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++N C +E + L+ EM G+ V TY + + +E A K F+EM+
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
TY I K + A ELF T+ C I YS LIDG CK G++E A
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 181 ELFQSL------PRVGLM----------PNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAK 224
++F+ + P V + PNVVTY ++ GFC ++++A L M +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 225 GVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
G PN + ++ L+ G + + + E+ M E
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 93/242 (38%), Gaps = 13/242 (5%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++E RL D RP+ Y+ LI F +D A + M + + T
Sbjct: 220 LEELGRLKDFRF----RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
CK E+L L ++ P V Y L GL E E A+ + M+ +
Sbjct: 276 FAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
TY+T + G + + + + C + ++ L+ C G A+
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQ------MDKAHDLFLDMEAKGVAPNCVTFN 234
+L + + + G MP V YNI+I C D +D A + +M A GV N + +
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452
Query: 235 TL 236
+
Sbjct: 453 SF 454
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 3/198 (1%)
Query: 59 NTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
N L+ +C+ +L + RP+ TYN L + +++ A + EM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 119 SDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
+++ + T F LCK G EA L T + + Y+ LI GLC+ E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTV---FYTKLISGLCEASLFEE 320
Query: 179 AWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
A + + +PNVVTY+ ++ G N Q+ + + M +G P+ FN+L+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 239 GCIRNNETSKVVELLHRM 256
+ + S +LL +M
Sbjct: 381 AYCTSGDHSYAYKLLKKM 398
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 4/197 (2%)
Query: 57 TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
TYN LI + K ++ + ++ EM +R T + L ++ + AL L +
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---V 293
Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
+ + +T Y I GLC+ EA + +R C + YS L+ G +L
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTL 236
+ + G P+ +N ++H +C G A+ L M G P V +N +
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN-I 412
Query: 237 MLGCIRNNETSKVVELL 253
++G I ++ S +LL
Sbjct: 413 LIGSICGDKDSLNCDLL 429
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 72/189 (38%), Gaps = 39/189 (20%)
Query: 7 LLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYC 66
LL+ M +GV PN Y LID C G +D A L M + Y +I G+
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF- 859
Query: 67 KTKDVEESLNLYSEMLSKGIRP---------------------------------TVV-- 91
K+ ESL L E+ P T+V
Sbjct: 860 -NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 92 --TYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFR 149
TYN+L L ++VE A +LF EM V E ++ + I GL +N I EA L
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Query: 150 TLRVLKCEL 158
+ + C L
Sbjct: 979 FISHMVCPL 987
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELF--VSMDINGCMHNVVTYNT 60
E+ LLD + Q P VY LID ++ A L V+ + TYN+
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQH 118
LI C VE + L+SEM KG+ P + ++ +L GLF ++ AL L D + H
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 135/262 (51%), Gaps = 12/262 (4%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D ++ M +RG P+++ Y TLI G C G ID A++LF M C VVTY +
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LING C +K+V+E++ EM SKGI P V TY++L GL + + A++LF+ M
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELF--RTLRVLKCELGIEAYSCLIDGLCKIGKLET 178
TY T I GLCK I EA EL L+ LK + G+ Y +I G C I K
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL--YGKVISGFCAISKFRE 350
Query: 179 AWELFQSLPRVGLMPNVVTYNI-------MIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
A + G+ PN +T+NI ++ G C + +A L+L M ++G++
Sbjct: 351 AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSRGISVEVE 409
Query: 232 TFNTLMLGCIRNNETSKVVELL 253
T +L+ + E K V+L+
Sbjct: 410 TLESLVKCLCKKGEFQKAVQLV 431
Score = 144 bits (362), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 1/225 (0%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLT-GEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTK 69
M + G+ P + LI C G +D ++F+ M GC + TY TLI+G C+
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 70 DVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYN 129
++E+ L++EM+ K PTVVTY +L +GL V+ A++ +EM+ + TY+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 130 TFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRV 189
+ +DGLCK+G ++A ELF + C + Y+ LI GLCK K++ A EL +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 190 GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFN 234
GL P+ Y +I GFC + +A + +M G+ PN +T+N
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 1/223 (0%)
Query: 18 PNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD-VEESLN 76
P+ Y T++ +++ A + + +M G V + N LI C+ V+ L
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 77 LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
++ EM +G P TY TL GL +++ A KLF EM D A TY + I+GLC
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVV 196
+ + EA ++ E + YS L+DGLCK G+ A ELF+ + G PN+V
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 197 TYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
TY +I G C + ++ +A +L M +G+ P+ + ++ G
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 72 EESLNL----YSEMLSKGIRPTVVTYNTLFHGLFEIH-QVEHALKLFDEMQHSDVAAETS 126
E LNL Y M G+ PTV + N L L V+ LK+F EM ++
Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 193
Query: 127 TYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSL 186
TY T I GLC+ G I EA +LF + C + Y+ LI+GLC ++ A + +
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
Query: 187 PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNET 246
G+ PNV TY+ ++ G C DG+ +A +LF M A+G PN VT+ TL+ G + +
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 247 SKVVELLHRMD 257
+ VELL RM+
Sbjct: 314 QEAVELLDRMN 324
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 1/222 (0%)
Query: 39 ARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFH 98
A +L V M I C+ + ++ GY + +SL ++ +M P+ Y T+
Sbjct: 70 AEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129
Query: 99 GLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA-ELFRTLRVLKCE 157
L E +Q+ A K + M+ + ++ N I LC+N V+A ++F + C+
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
Y LI GLC+ G+++ A +LF + P VVTY +I+G C +D+A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
+M++KG+ PN T+++LM G ++ + + +EL M R
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 95/209 (45%), Gaps = 4/209 (1%)
Query: 56 VTYNTLINGYCKTKDVEESLNLYSEMLSK---GIRPTVVTYNTLFHGLFEIHQVEHALKL 112
+T + +I KDVE+S+ ++ ++ G ++ + L ++ + A L
Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73
Query: 113 FDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCK 172
M+ + + G + ++ +F ++ C+ +AY ++ L +
Sbjct: 74 IVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVE 133
Query: 173 IGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFC-NDGQMDKAHDLFLDMEAKGVAPNCV 231
+L A++ ++++ +GL P V + N++I C NDG +D +FL+M +G P+
Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 193
Query: 232 TFNTLMLGCIRNNETSKVVELLHRMDERN 260
T+ TL+ G R + +L M E++
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 42/193 (21%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A L ++M+ RG RPN Y+TLI G C +I A EL M++ G + Y +I
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 63 NGYCKTKDVEESLN-----------------------------------------LYSEM 81
+G+C E+ N LY M
Sbjct: 340 SGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSM 399
Query: 82 LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
S+GI V T +L L + + + A++L DE+ T+ I +
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIV 459
Query: 142 VEAAE-LFRTLRV 153
EA++ L R L +
Sbjct: 460 GEASDTLLRDLDI 472
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 150 bits (379), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 141/291 (48%), Gaps = 35/291 (12%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L M+ G+ P+++ Y+TLI G+C G + A + NG + + TY +LI
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+G C + +L L++E L KGI+P V+ YNTL GL + A +L +EM +
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTL--------------------RVLKCELGIE- 161
E T+N ++GLCK G + +A L + + LK E +E
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 162 --------------AYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCN 207
Y+ L++GLCK K E E ++++ G PN+ T+NI++ C
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 208 DGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDE 258
++D+A L +M+ K V P+ VTF TL+ G +N + L +M+E
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 135/259 (52%), Gaps = 1/259 (0%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
+ A L + + +G++PN +Y+TLI G G I A +L M G + V T+N L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
+NG CK V ++ L M+SKG P + T+N L HG ++E+AL++ D M + V
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+ TYN+ ++GLCK + E ++T+ C + ++ L++ LC+ KL+ A
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGC 240
L + + + P+ VT+ +I GFC +G +D A+ LF M EA V+ + T+N ++
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 241 IRNNETSKVVELLHRMDER 259
+ +L M +R
Sbjct: 613 TEKLNVTMAEKLFQEMVDR 631
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 1/260 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A L+ +MI +G P+ F ++ LI G+ +++ A E+ M NG +V TYN+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+NG CKT E+ + Y M+ KG P + T+N L L +++ AL L +EM++
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTL-RVLKCELGIEAYSCLIDGLCKIGKLETA 179
V + T+ T IDG CKNG + A LFR + K Y+ +I + + A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621
Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+LFQ + L P+ TY +M+ GFC G ++ + L+M G P+ T ++
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 240 CIRNNETSKVVELLHRMDER 259
+ + ++HRM ++
Sbjct: 682 LCVEDRVYEAAGIIHRMVQK 701
Score = 137 bits (346), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 35/294 (11%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ E +LLD +I+RGV PN F Y+ I G C GE+D A + + G +V+TYN
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVE------------- 107
LI G CK +E+ +M+++G+ P TYNTL G + V+
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 108 ----------------------HALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAA 145
AL LF+E + YNT I GL G I+EAA
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 146 ELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGF 205
+L + ++ ++ L++GLCK+G + A L + + G P++ T+NI+IHG+
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 206 CNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
+M+ A ++ M GV P+ T+N+L+ G + ++ V+E M E+
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 126/234 (53%), Gaps = 5/234 (2%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
M+ A +LD+M+ GV P+ + Y++L++G C T + + E + +M GC N+ T+N
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS- 119
L+ C+ + ++E+L L EM +K + P VT+ TL G + ++ A LF +M+ +
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYS--CLIDGLCKIGKLE 177
V++ T TYN I + + A +LF+ + V +C LG + Y+ ++DG CK G +
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM-VDRC-LGPDGYTYRLMVDGFCKTGNVN 654
Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCV 231
++ + G +P++ T +I+ C + ++ +A + M KG+ P V
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+A ++ M RG+ P+ + ++ + FC T A L +M GC NVV Y T+
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
+ G+ + E L+ +ML+ G+ + T+N L L + V+ KL D++ V
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
TYN FI GLC+ G + A + L + + Y+ LI GLCK K + A
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
+ GL P+ TYN +I G+C G + A + D G P+ T+ +L+ G
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 242 RNNETSKVVELLH 254
ET++ + L +
Sbjct: 368 HEGETNRALALFN 380
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ EA + + M P F Y+ ++ +G D+A ++++ M G +V ++
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+ +CKT +L L + M S+G VV Y T+ G +E + +LF +M S
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
V+ ST+N + LCK G + E +L + + Y+ I GLC+ G+L+ A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
+ L G P+V+TYN +I+G C + + +A M +G+ P+ T+NTL+ G
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 108/235 (45%)
Query: 22 VYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
VY + + G++ A +F MD C V +YN +++ + +++ +Y M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 82 LSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYI 141
+GI P V ++ + + AL+L + M Y T + G + +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 142 VEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIM 201
E ELF + L + ++ L+ LCK G ++ +L + + G++PN+ TYN+
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 202 IHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
I G C G++D A + + +G P+ +T+N L+ G +N++ + L +M
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 6/226 (2%)
Query: 38 RARELFVSMDIN-GCMHNVVTYNTLING---YCKTKDVEESLNLYSEMLSKGIRPTVVTY 93
+A E+F SM G H + TY ++I Y K + +EE L E + + V
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 94 NTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRV 153
+G +V+ A+ +F+ M D +YN + L +GY +A +++ +R
Sbjct: 82 AMKNYG--RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 154 LKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDK 213
+ +++ + CK + A L ++ G NVV Y ++ GF + +
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199
Query: 214 AHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
++LF M A GV+ TFN L+ + + + +LL ++ +R
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 134/256 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+DEA +L+D M+ RG++P+ F Y+T+I G C G +DRA E+ ++++ GC +V++YN
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L+ EE L ++M S+ P VVTY+ L L ++E A+ L M+
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + +Y+ I C+ G + A E T+ C I Y+ ++ LCK GK + A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
E+F L VG PN +YN M + G +A + L+M + G+ P+ +T+N+++
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 241 IRNNETSKVVELLHRM 256
R + ELL M
Sbjct: 484 CREGMVDEAFELLVDM 499
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 134/256 (52%), Gaps = 1/256 (0%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A R+++++ + G +P+ F Y+ LI+GFC ID A + M + VTYN
Sbjct: 140 IPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
+I C ++ +L + +++LS +PTV+TY L V+ ALKL DEM
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TYNT I G+CK G + A E+ R L + CE + +Y+ L+ L GK E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L + PNVVTY+I+I C DG++++A +L M+ KG+ P+ +++ L+
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 241 IRNNETSKVVELLHRM 256
R +E L M
Sbjct: 379 CREGRLDVAIEFLETM 394
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 134/258 (51%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A+R+LD M + P+ Y+ +I C G++D A ++ + + C V+TY
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI V+E+L L EMLS+G++P + TYNT+ G+ + V+ A ++ ++
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ +YN + L G E +L + KC+ + YS LI LC+ GK+E A
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
L + + GL P+ +Y+ +I FC +G++D A + M + G P+ V +NT++
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 241 IRNNETSKVVELLHRMDE 258
+N + + +E+ ++ E
Sbjct: 414 CKNGKADQALEIFGKLGE 431
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 117/221 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA LL LM ++G+ P+A+ Y LI FC G +D A E +M +GC+ ++V YNT
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
++ CK +++L ++ ++ G P +YNT+F L+ AL + EM +
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ + TYN+ I LC+ G + EA EL +R + + Y+ ++ G CK ++E A
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM 221
+ +S+ G PN TY ++I G G +A +L D+
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 131/257 (50%), Gaps = 1/257 (0%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
E+ LL+ M+++G P+ + + LI GF I +A + ++ G +V YN LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
NG+CK ++++ + M SK P VTYN + L +++ ALK+ +++ +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
TY I+ G + EA +L + + + Y+ +I G+CK G ++ A+E+
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
++L G P+V++YNI++ N G+ ++ L M ++ PN VT++ L+ R
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 243 NNETSKVVELLHRMDER 259
+ + + + LL M E+
Sbjct: 346 DGKIEEAMNLLKLMKEK 362
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 66 CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALK---LFDEMQHSDVA 122
C++ + ESL+L M+ KG P V+ L G F + + A++ + ++ DV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
A YN I+G CK I +A + +R Y+ +I LC GKL+ A ++
Sbjct: 160 A----YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
L P V+TY I+I +G +D+A L +M ++G+ P+ T+NT++ G +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 243 NNETSKVVELLHRMD 257
+ E++ ++
Sbjct: 276 EGMVDRAFEMVRNLE 290
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M+ G+ P+ Y+++I C G +D A EL V M +VVTYN ++ G+CK
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGL-FEIHQVEHALKLFDEMQHSDVAAETS 126
+E+++N+ M+ G RP TY L G+ F ++ E A++L +++ D +E S
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELANDLVRIDAISEYS 579
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 126/238 (52%), Gaps = 1/238 (0%)
Query: 1 MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
+ +A ++ D+M + PN+ YS LI G C G ++ A L M GC + TY
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 60 TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
LI C ++++ NL+ EM+ +G +P V TY L GL ++E A + +M
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
+ TYN I+G CK+G +V A EL + C+ + ++ L++GLC++GK A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
L + + GL P++V+YN++I G C +G M+ A+ L M + P+C+TF ++
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 134/256 (52%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
++EA L D M ++G +P+ Y+ LI C G ID+A LF M GC NV TY
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G C+ +EE+ + +M+ I P+V+TYN L +G + +V A +L M+
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
T+N ++GLC+ G +A L + + I +Y+ LIDGLC+ G + TA+
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
+L S+ + P+ +T+ +I+ FC G+ D A M KG++ + VT TL+ G
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 241 IRNNETSKVVELLHRM 256
+ +T + +L +
Sbjct: 522 CKVGKTRDALFILETL 537
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 131/237 (55%), Gaps = 5/237 (2%)
Query: 23 YSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYNTLINGYCKTKDVEESLNLYSEM 81
Y T+++ C G + A E+F+S + G + + +L+ G+C+ ++ ++L ++ ++
Sbjct: 198 YRTIVNALCKNGYTEAA-EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-DV 255
Query: 82 LSKGI--RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNG 139
+SK + P V+Y+ L HGL E+ ++E A L D+M T TY I LC G
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 140 YIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYN 199
I +A LF + C+ + Y+ LIDGLC+ GK+E A + + + + + P+V+TYN
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 200 IMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
+I+G+C DG++ A +L ME + PN TFN LM G R + K V LL RM
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 135/291 (46%), Gaps = 35/291 (12%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+D+A L D MI RG +PN Y+ LIDG C G+I+ A + M + +V+TYN
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LINGYCK V + L + M + +P V T+N L GL + + A+ L M +
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
++ + +YN IDGLC+ G++ A +L ++ E ++ +I+ CK GK + A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKA----------------HDL--FLDME 222
+ R G+ + VT +I G C G+ A H L LDM
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 223 AK-----------------GVAPNCVTFNTLMLGCIRNNETSKVVELLHRM 256
+K G+ P+ VT+ TL+ G IR+ + + +L M
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 130/257 (50%), Gaps = 1/257 (0%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDIN-GCMHNVVTYNT 60
+ A + +++ G ++ + ++L+ GFC + A ++F M C N V+Y+
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSI 271
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
LI+G C+ +EE+ L +M KG +P+ TY L L + ++ A LFDEM
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
TY IDGLC++G I EA + R + + + Y+ LI+G CK G++ A+
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGC 240
EL + + PNV T+N ++ G C G+ KA L M G++P+ V++N L+ G
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 241 IRNNETSKVVELLHRMD 257
R + +LL M+
Sbjct: 452 CREGHMNTAYKLLSSMN 468
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 127/257 (49%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
+A LL M+ G+ P+ Y+ LIDG C G ++ A +L SM+ + +T+ +I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
N +CK + + ML KGI VT TL G+ ++ + AL + + + +
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
+ N +D L K + E + + L + Y+ L+DGL + G + ++ +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIR 242
+ + G +PNV Y I+I+G C G++++A L M+ GV+PN VT+ ++ G +
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 243 NNETSKVVELLHRMDER 259
N + + +E + M ER
Sbjct: 664 NGKLDRALETVRAMVER 680
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 7/249 (2%)
Query: 15 GVRPNAFVYSTLIDGFCLTGEIDRARELFVS---MDINGCMHNVVTYNTLINGYCKTKDV 71
G R N YS+L+ ++D +V+ M+ +G + ++ Y T++N CK
Sbjct: 155 GFRLNYPCYSSLLMSL---AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYT 211
Query: 72 EESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETS-TYNT 130
E + S++L G +L G + ALK+FD M A S +Y+
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSI 271
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPRVG 190
I GLC+ G + EA L + C+ Y+ LI LC G ++ A+ LF + G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 191 LMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVV 250
PNV TY ++I G C DG++++A+ + M + P+ +T+N L+ G ++
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 251 ELLHRMDER 259
ELL M++R
Sbjct: 392 ELLTVMEKR 400
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 112/280 (40%), Gaps = 57/280 (20%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRAR---ELFVSMDI---------- 48
D AS L LM+++G+ + +TLIDG C G+ A E V M I
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 49 -----NGC-----------------MHNVVTYNTLINGYCKTKDVEESLNLYSEMLSKGI 86
GC + +VVTY TL++G ++ D+ S + M G
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 87 RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
P V Y + +GL + +VE A KL MQ S V+ TY + G NG + A E
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 147 LFRTLRVLKCELGIEAYSCLIDG---------------LCKIGKLETAWELFQSLPRV-- 189
R + EL YS L+ G + I ET E L V
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732
Query: 190 ---GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
G + + + ++ C +G+ D+++DL ++ +GV
Sbjct: 733 QLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGV 770
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 52/209 (24%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGE-IDRARELFVS-------------- 45
+D A + M++RG N +YS+L+ GF L+ + ID + E VS
Sbjct: 667 LDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINE 726
Query: 46 -----MDINGCMHNVVTY--------------------------------NTLINGYCKT 68
+ GC+ + + + ++ YC
Sbjct: 727 LISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSK 786
Query: 69 KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
K + + L + +L G P+ ++ + GL + E A +L E+ S+ E S
Sbjct: 787 KKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGV 846
Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
T+++ L + + +E+ + L C
Sbjct: 847 LTYVECLMEGDETGDCSEVIDLVDQLHCR 875
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 142/262 (54%), Gaps = 4/262 (1%)
Query: 2 DEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTL 61
D+ LL+ M GV PN +Y+T++ FC G D + ++ M G + ++VT+N+
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 62 INGYCKTKDVEESLNLYSEM-LSKGI---RPTVVTYNTLFHGLFEIHQVEHALKLFDEMQ 117
I+ CK V ++ ++S+M L + + RP +TYN + G ++ +E A LF+ ++
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
Query: 118 HSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLE 177
+D A +YN ++ GL ++G +EA + + + I +Y+ L+DGLCK+G L
Sbjct: 319 ENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLS 378
Query: 178 TAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLM 237
A + + R G+ P+ VTY ++HG+C+ G++D A L +M PN T N L+
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438
Query: 238 LGCIRNNETSKVVELLHRMDER 259
+ S+ ELL +M+E+
Sbjct: 439 HSLWKMGRISEAEELLRKMNEK 460
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 136/280 (48%), Gaps = 23/280 (8%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA +L M +G+ P+ + Y+ L+DG C G + A+ + M NG + VTY L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
+GYC V+ + +L EM+ P T N L H L+++ ++ A +L +M
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVL-----------------------KCELG 159
+T T N +DGLC +G + +A E+ + +RV C
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 160 IEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFL 219
+ YS L++GLCK G+ A LF + L P+ V YNI IH FC G++ A +
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Query: 220 DMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDER 259
DME KG + T+N+L+LG N+ ++ L+ M E+
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 123/240 (51%), Gaps = 6/240 (2%)
Query: 5 SRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLING 64
S L M+ G+ P + ++ LI C + +D ARELF M GC N T+ L+ G
Sbjct: 132 SWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRG 191
Query: 65 YCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAE 124
YCK ++ L L + M S G+ P V YNT+ + + + K+ ++M+ + +
Sbjct: 192 YCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD 251
Query: 125 TSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIE-----AYSCLIDGLCKIGKLETA 179
T+N+ I LCK G +++A+ +F + L LG+ Y+ ++ G CK+G LE A
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDME-LDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 180 WELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLG 239
LF+S+ + ++ +YNI + G G+ +A + M KG+ P+ ++N LM G
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 23/283 (8%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ +A ++ LM + GV P+A Y L+ G+C G++D A+ L M N C+ N T N
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
L++ K + E+ L +M KG VT N + GL +++ A+++ M+
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 121 VAA-----------------------ETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCE 157
AA + TY+T ++GLCK G EA LF + K +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 158 LGIEAYSCLIDGLCKIGKLETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDL 217
AY+ I CK GK+ +A+ + + + + G ++ TYN +I G Q+ + H L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 218 FLDMEAKGVAPNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
+M+ KG++PN T+NT + + LL M ++N
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 9 DLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKT 68
D +I+ P+ YSTL++G C G A+ LF M + V YN I+ +CK
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 69 KDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTY 128
+ + + +M KG ++ TYN+L GL +Q+ L DEM+ ++ TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 129 NTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQSLPR 188
NT I LC+ + +A L + + ++ LI+ CK+ + A E+F++
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS 692
Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
+ + Y++M + GQ+ KA +L + +G + L+ + +E
Sbjct: 693 ICGQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEV 751
Query: 249 VVELLHRMDER 259
+LH+M +R
Sbjct: 752 ASGILHKMIDR 762
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLI 62
EA L M+ ++P++ Y+ I FC G+I A + M+ GC ++ TYN+LI
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Query: 63 NGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVA 122
G + E L EM KGI P + TYNT L E +VE A L DEM ++A
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 661
Query: 123 AETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWEL 182
++ I+ CK A E+F T V C YS + + L G+L A EL
Sbjct: 662 PNVFSFKYLIEAFCKVPDFDMAQEVFET-AVSICGQKEGLYSLMFNELLAAGQLLKATEL 720
Query: 183 FQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKG 225
+++ G Y ++ C +++ A + M +G
Sbjct: 721 LEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 12/251 (4%)
Query: 17 RPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKDVEESLN 76
+P+ ++Y+ L++ ++ L+ M + G T+N LI C + V+ +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 77 LYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLC 136
L+ EM KG +P T+ L G + + L+L + M+ V YNT + C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 137 KNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWELFQ--------SLPR 188
+ G ++ ++ +R I ++ I LCK GK+ A +F LPR
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
PN +TYN+M+ GFC G ++ A LF + + ++N + G +R+ + +
Sbjct: 289 ----PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 249 VVELLHRMDER 259
+L +M ++
Sbjct: 345 AETVLKQMTDK 355
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 6/262 (2%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+ A R+L M ++G + Y++LI G + +I L M G N+ TYNT
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSD 120
I C+ + VE++ NL EM+ K I P V ++ L ++ + A ++F E S
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSI 693
Query: 121 VAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAW 180
+ Y+ + L G +++A EL + ELG Y L++ LCK +LE A
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753
Query: 181 ELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAH---DLFLDMEAKGVAPNCVTFNTLM 237
+ + G + +I G G +A+ D ++M + G N V N
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARD 813
Query: 238 LGCIRNNET--SKVVELLHRMD 257
+ ++N+ + +LHR D
Sbjct: 814 IHQKKHNKNGGNNWQNILHRDD 835
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 147 bits (372), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 138/247 (55%), Gaps = 5/247 (2%)
Query: 11 MIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGYCKTKD 70
M Q+G++ N +T++D C ++D A L S G + + VTY TLI G+ + +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 71 VEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNT 130
VE++L ++ EM I PTV T+N+L GL + E A++ FDE+ S + + ST+N+
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 131 FIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSC--LIDGLCKIGKLETAWELFQSLPR 188
I G CK G + +A E + +K + Y+C L++GLCK G E A F +L
Sbjct: 562 IILGYCKEGRVEKAFEFYN--ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 189 VGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCIRNNETSK 248
+ + VTYN MI FC D ++ +A+DL +ME KG+ P+ T+N+ + + + + S+
Sbjct: 620 EREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678
Query: 249 VVELLHR 255
ELL +
Sbjct: 679 TDELLKK 685
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 135/259 (52%), Gaps = 11/259 (4%)
Query: 6 RLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNTLINGY 65
++ +L+ G P+ Y TLI + G++ A E+ M G N +T NT+++
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 66 CKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAET 125
CK + ++E+ NL + +G VTY TL G F +VE AL+++DEM+ +
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Query: 126 STYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGI----EAYSCLIDGLCKIGKLETAWE 181
ST+N+ I GLC +G A E F L E G+ ++ +I G CK G++E A+E
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDEL----AESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDM-EAKGVAPNCVTFNTLMLGC 240
+ + P+ T NI+++G C +G +KA + F + E + V + VT+NT++
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAF 635
Query: 241 IRNNETSKVVELLHRMDER 259
++ + + +LL M+E+
Sbjct: 636 CKDKKLKEAYDLLSEMEEK 654
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
Query: 3 EASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDR-ARELFVSMDINGCMHNVVTYNTL 61
EA +L++ M GV+ N ++ + C + + R++ +D++G ++VTY+TL
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 62 INGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHSDV 121
I Y K D+ +L + EM KGI+ +T NT+ L + +++ A L +
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 122 AAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETAWE 181
+ TY T I G + + +A E++ ++ +K + ++ LI GLC GK E A E
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 182 LFQSLPRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLMLGCI 241
F L GL+P+ T+N +I G+C +G+++KA + + + P+ T N L+ G
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 242 RNNETSKVVELLHRMDE 258
+ T K + + + E
Sbjct: 603 KEGMTEKALNFFNTLIE 619
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 140/267 (52%), Gaps = 14/267 (5%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSM----DINGCMHNVV 56
+ A + D M++ GV N ++ L++G+CL G+++ A + M +N + V
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP---DNV 241
Query: 57 TYNTLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEM 116
TYNT++ K + + L +M G+ P VTYN L +G ++ ++ A ++ + M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 117 QHSDVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKL 176
+ ++V + TYN I+GLC G + E EL ++ LK + + Y+ LIDG ++G
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 177 ETAWELFQSLPRVGLMPNVVTYNIMIHGFCNDGQMD----KAHDLFLDMEAKGVAPNCVT 232
A +L + + G+ N VT+NI + C + + + K +L +DM G +P+ VT
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL-VDMH--GFSPDIVT 418
Query: 233 FNTLMLGCIRNNETSKVVELLHRMDER 259
++TL+ ++ + S +E++ M ++
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQK 445
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 2/261 (0%)
Query: 1 MDEASRLLDLMIQR-GVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYN 59
+++A +L+ M+ V P+ Y+T++ G + +EL + M NG + N VTYN
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 60 TLINGYCKTKDVEESLNLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHALKLFDEMQHS 119
L+ GYCK ++E+ + M + P + TYN L +GL + L+L D M+
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 120 DVAAETSTYNTFIDGLCKNGYIVEAAELFRTLRVLKCELGIEAYSCLIDGLCKIGKLETA 179
+ + TYNT IDG + G +EA +L + + ++ + LCK K E
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 180 WELFQSLPRV-GLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGVAPNCVTFNTLML 238
+ L + G P++VTY+ +I + G + A ++ +M KG+ N +T NT++
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459
Query: 239 GCIRNNETSKVVELLHRMDER 259
+ + + LL+ +R
Sbjct: 460 ALCKERKLDEAHNLLNSAHKR 480
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 57/234 (24%)
Query: 1 MDEASRLLDLMIQRGVRPNAFVYSTLIDGFCLTGEIDRARELFVSMDINGCMHNVVTYNT 60
+++A + D M + + P +++LI G C G+ + A E F + +G + + T+N+
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 61 LINGYCKTKDVEESLNLYSEMLSKGIRPT------------------------------- 89
+I GYCK VE++ Y+E + +P
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 90 ---VVTYNTLFHGLFEIHQVEHALKLFDEMQHSDVAAETSTYNTFIDGLCKNGYIVEAAE 146
VTYNT+ + +++ A L EM+ + + TYN+FI L ++G + E E
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681
Query: 147 LFRTLR----VLKCELGIE-------------------AYSCLIDGLCKIGKLE 177
L + +K +L +E AYS +ID LC G+L+
Sbjct: 682 LLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLK 735
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 6/214 (2%)
Query: 53 HNVVTYNTLINGYCKTKDVEESL--NLYSEMLSKGIRPTVVTYNTLFHGLFEIHQVEHAL 110
H +L+ Y +T D SL +L L P+ ++ + AL
Sbjct: 92 HKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVAL 151
Query: 111 KLFDEMQHSDVAAETSTYNTFIDGLCK---NGYIVEAAELFRTLRVLKCELGIEAYSCLI 167
++F +M + T NT + GL + + I A E+F + + L ++ ++ L+
Sbjct: 152 QIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLV 211
Query: 168 DGLCKIGKLETAWELFQSL-PRVGLMPNVVTYNIMIHGFCNDGQMDKAHDLFLDMEAKGV 226
+G C GKLE A + + + + P+ VTYN ++ G++ +L LDM+ G+
Sbjct: 212 NGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGL 271
Query: 227 APNCVTFNTLMLGCIRNNETSKVVELLHRMDERN 260
PN VT+N L+ G + + +++ M + N
Sbjct: 272 VPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,408,921
Number of Sequences: 539616
Number of extensions: 3649686
Number of successful extensions: 17122
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 9002
Number of HSP's gapped (non-prelim): 3365
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)