BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044048
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis
thaliana GN=IPT5 PE=1 SV=2
Length = 330
Score = 278 bits (711), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/268 (53%), Positives = 188/268 (70%), Gaps = 11/268 (4%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFV-D 59
MGAT TGK++L+IDLA F E +NSDKIQVYKGLDI TNKVT E GVPHHLLG V D
Sbjct: 39 MGATGTGKSRLAIDLATRFPAEIVNSDKIQVYKGLDIVTNKVTPEESLGVPHHLLGTVHD 98
Query: 60 PEADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRANYDCCFIWM 119
D+ E+F A+RA++ I++ +PII GGSN+YIEALV D ++FR Y+CCF+W+
Sbjct: 99 TYEDFTAEDFQREAIRAVESIVQRDRVPIIAGGSNSYIEALVNDC-VDFRLRYNCCFLWV 157
Query: 120 DVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDP-NADYNRGIRRSIGAPELHEYLKLE-S 177
DV VL+ +V RVDKMV+ GLVDEVR +FDP ++DY+ GIRR+IG PEL E+L+ E
Sbjct: 158 DVSRPVLHSFVSERVDKMVDMGLVDEVRRIFDPSSSDYSAGIRRAIGVPELDEFLRSEMR 217
Query: 178 NVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIHRIDATYVLEGR 237
N ETT LL+ AI++IK+NTC L +Q+QKI+RL + W +HR+DAT V
Sbjct: 218 NYPAETTER----LLETAIEKIKENTCLLACRQLQKIQRLYKQWKWNMHRVDATEVF--- 270
Query: 238 MKDAEDAEDAWEEVVLKPGVAIVEDFLN 265
++ E+A++AW+ V P VE FL+
Sbjct: 271 LRRGEEADEAWDNSVAHPSALAVEKFLS 298
>sp|Q93WC9|IPT3_ARATH Adenylate isopentenyltransferase 3, chloroplastic OS=Arabidopsis
thaliana GN=IPT3 PE=1 SV=1
Length = 336
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 178/265 (67%), Gaps = 6/265 (2%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
MGAT TGK++LS+D+A F E INSDKIQV++GLDI TNK+T E GVPHHLLG + P
Sbjct: 47 MGATGTGKSRLSVDIATRFRAEIINSDKIQVHQGLDIVTNKITSEESCGVPHHLLGVLPP 106
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRANYDCCFIWMD 120
EAD +C A +I+ ++ G LPIIVGGSN+Y+EALV+D FR+ YDCCF+W+D
Sbjct: 107 EADLTAANYCHMANLSIESVLNRGKLPIIVGGSNSYVEALVDDKENKFRSRYDCCFLWVD 166
Query: 121 VDPLVLYKYVGIRVDKMVETGLVDEVRDMFD-PNADYNRGIRRSIGAPELHEYLKLESNV 179
V VL+ +V RVDKMVE+G+V+EVR+ FD N+DY+RGI+++IG PE + + E +
Sbjct: 167 VALPVLHGFVSERVDKMVESGMVEEVREFFDFSNSDYSRGIKKAIGFPEFDRFFRNEQFL 226
Query: 180 KNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIHRIDATYVLEGRMK 239
E +++ LL K ++EIK NT +L +Q +KI+RLR W I R+DAT V R +
Sbjct: 227 NVE----DREELLSKVLEEIKRNTFELACRQREKIERLRKVKKWSIQRVDATPVFTKR-R 281
Query: 240 DAEDAEDAWEEVVLKPGVAIVEDFL 264
DA AWE +V P V FL
Sbjct: 282 SKMDANVAWERLVAGPSTDTVSRFL 306
>sp|Q94ID1|IPT7_ARATH Adenylate isopentenyltransferase 7, mitochondrial OS=Arabidopsis
thaliana GN=IPT7 PE=2 SV=2
Length = 329
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/270 (50%), Positives = 181/270 (67%), Gaps = 7/270 (2%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
MGAT +GK++L+IDLA F GE INSDKIQ+YKGLD+ TNKVT E +GVPHHLLG D
Sbjct: 40 MGATGSGKSRLAIDLATRFQGEIINSDKIQLYKGLDVLTNKVTPKECRGVPHHLLGVFDS 99
Query: 61 EA-DYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRANYDCCFIWM 119
EA + ++ A +AI K+ N LPI+ GGSN+YIEALV S NYDCCFIW+
Sbjct: 100 EAGNLTATQYSRLASQAISKLSANNKLPIVAGGSNSYIEALVNHSSGFLLNNYDCCFIWV 159
Query: 120 DVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPELHEYLKLESNV 179
DV VL +V RVD+M+E GL++EVR++F+P A+Y+ GIRR+IG PELHEYL+ ES V
Sbjct: 160 DVSLPVLNSFVSKRVDRMMEAGLLEEVREVFNPKANYSVGIRRAIGVPELHEYLRNESLV 219
Query: 180 KNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIHRIDATYVLEGRMK 239
T K +L A++ IK NT L +Q++KI+RL + +HR+DAT V R
Sbjct: 220 DRAT----KSKMLDVAVKNIKKNTEILACRQLKKIQRLHKKWKMSMHRVDATEVFLKR-- 273
Query: 240 DAEDAEDAWEEVVLKPGVAIVEDFLNKIKQ 269
+ E+ ++AWE +V +P IV+ F N Q
Sbjct: 274 NVEEQDEAWENLVARPSERIVDKFYNNNNQ 303
>sp|Q5GHF7|IPT_HUMLU Adenylate isopentenyltransferase OS=Humulus lupulus PE=1 SV=1
Length = 329
Score = 215 bits (548), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 169/295 (57%), Gaps = 30/295 (10%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
MGAT TGK++LSIDLA HF E INSDK+QVYKGLDI TNK++ +R GVPHHLLG VDP
Sbjct: 36 MGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDP 95
Query: 61 -EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED---------------S 104
+ +F A +A+ +I LP++VGGSN++I AL+ D S
Sbjct: 96 ARGELTPADFRSLAGKAVSEITGRRKLPVLVGGSNSFIHALLVDRFDSSGPGVFEEGSHS 155
Query: 105 IINFRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDP-------NADYN 157
+++ YDCCF+W+DV VL Y+ RVD M+E G+ DE+ + + P ++
Sbjct: 156 VVSSELRYDCCFLWVDVSVKVLTDYLAKRVDDMLELGMFDELAEFYSPEDEDHDEDSATR 215
Query: 158 RGIRRSIGAPELHEYLKLESNVKNETTNNNKDLLLKKAIQE----IKDNTCKLVDKQVQK 213
G+R++IG PE Y + E + +D + + A +E IK+NTC L +Q+ K
Sbjct: 216 TGLRKAIGVPEFDRYFEKFRPGDVEGEDPGRDRVRRGAFEEAVRAIKENTCHLAKRQIGK 275
Query: 214 IKRLRNELGWKIHRIDATYVLEGRMK--DAEDAEDAWEEVVLKPGVAIVEDFLNK 266
I RL+ GW + R+DAT M E + WE+ VL+P V IV FL++
Sbjct: 276 ILRLKGA-GWDLRRLDATESFRAAMTSDSGEKCTEIWEKQVLEPSVKIVSRFLDE 329
>sp|Q9LJL4|IPT8_ARATH Adenylate isopentenyltransferase 8, chloroplastic OS=Arabidopsis
thaliana GN=IPT8 PE=2 SV=1
Length = 330
Score = 207 bits (528), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 170/288 (59%), Gaps = 27/288 (9%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
MGAT +GK+ LSIDLA FSGE +NSDKIQ Y GL + TN+++ ER GVPHHLLG + P
Sbjct: 49 MGATGSGKSCLSIDLATRFSGEIVNSDKIQFYDGLKVTTNQMSILERCGVPHHLLGELPP 108
Query: 61 -EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSI------------IN 107
+++ EF A R+I +I G+LPII GGSN++I AL+ D I+
Sbjct: 109 DDSELTTSEFRSLASRSISEITARGNLPIIAGGSNSFIHALLVDRFDPKTYPFSSETSIS 168
Query: 108 FRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDP----NADYNRGIRRS 163
Y+CCF+W+DV VL++Y+ RVD+M+E+G+ +E+ +DP +A GI ++
Sbjct: 169 SGLRYECCFLWVDVSVSVLFEYLSKRVDQMMESGMFEELAGFYDPRYSGSAIRAHGIHKT 228
Query: 164 IGAPELHEYLKL---ESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNE 220
IG PE Y L E K + + +A+QEIK+NT +L KQ+++I +L++
Sbjct: 229 IGIPEFDRYFSLYPPERKQKMSEWDQARKGAYDEAVQEIKENTWRLAKKQIERIMKLKSS 288
Query: 221 LGWKIHRIDATYVLEGRMKDAEDAEDAWEEVVLKPGVAIVEDFLNKIK 268
GW I R+DAT GR + + W+ VL + +V+ FL K K
Sbjct: 289 -GWDIQRLDATPSF-GR-----SSREIWDNTVLDESIKVVKRFLVKDK 329
>sp|Q94ID3|IPT1_ARATH Adenylate isopentenyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=IPT1 PE=1 SV=2
Length = 357
Score = 201 bits (512), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 167/288 (57%), Gaps = 28/288 (9%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+GAT GK++LS+DLA F E INSDKIQVY+GL+I TN++T +R+GVPHHLLG ++P
Sbjct: 71 LGATGAGKSRLSVDLATRFPSEIINSDKIQVYEGLEITTNQITLQDRRGVPHHLLGVINP 130
Query: 61 E-ADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVE-------------DSII 106
E + EF A + +I +PII GGSN+++ AL+ +I
Sbjct: 131 EHGELTAGEFRSAASNVVKEITSRQKVPIIAGGSNSFVHALLAQRFDPKFDPFSSGSCLI 190
Query: 107 NFRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDP---NADYNRGIRRS 163
+ Y+CCFIW+DV VLY+Y+ RVD+M+++G+ +E+ +DP + GIR++
Sbjct: 191 SSDLRYECCFIWVDVSETVLYEYLLRRVDEMMDSGMFEELSRFYDPVKSGLETRFGIRKA 250
Query: 164 IGAPELHEYLKLESNVKNETTNNNKDLLLK----KAIQEIKDNTCKLVDKQVQKIKRLRN 219
IG PE Y K E D L K KA+ +IK NT L +QV+KI+ L++
Sbjct: 251 IGVPEFDGYFK---EYPPEKKMIKWDALRKAAYDKAVDDIKRNTWTLAKRQVKKIEMLKD 307
Query: 220 ELGWKIHRIDATYVLEGRMKDAEDAE---DAWEEVVLKPGVAIVEDFL 264
GW+I R+DAT + M + + + WEE VL+P V IV+ L
Sbjct: 308 A-GWEIERVDATASFKAVMMKSSSEKKWRENWEEQVLEPSVKIVKRHL 354
>sp|Q9SB60|IPT4_ARATH Adenylate isopentenyltransferase 4 OS=Arabidopsis thaliana GN=IPT4
PE=1 SV=1
Length = 318
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 172/300 (57%), Gaps = 45/300 (15%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
MGAT +GK+ LS+DLA+HF E INSDK+Q Y GL I TN+ T +R+GVPHHLLG ++P
Sbjct: 11 MGATGSGKSSLSVDLALHFKAEIINSDKMQFYDGLKITTNQSTIEDRRGVPHHLLGELNP 70
Query: 61 EA-DYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSI-------------I 106
EA + EF A AI +I + LPI+ GGSN+YI AL+ S I
Sbjct: 71 EAGEVTAAEFRVMAAEAISEITQRKKLPILAGGSNSYIHALLAKSYDPENYPFSDHKGSI 130
Query: 107 NFRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNR-------- 158
YDCCFIW+DVD VL++Y+ +R+D M+++G+ +E+ A+++R
Sbjct: 131 CSELKYDCCFIWIDVDQSVLFEYLSLRLDLMMKSGMFEEI-------AEFHRSKKAPKEP 183
Query: 159 -GIRRSIGAPELHEYLKLESNVKNETTNNNKDLLLK----KAIQEIKDNTCKLVDKQVQK 213
GI ++IG E +YLK+ K + + D + K KA++ IK+NT +L Q+ K
Sbjct: 184 LGIWKAIGVQEFDDYLKM---YKWDNDMDKWDPMRKEAYEKAVRAIKENTFQLTKDQITK 240
Query: 214 IKRLRNELGWKIHRIDATYVLEGRMKDAEDAEDA-------WEEVVLKPGVAIVEDFLNK 266
I +LRN GW I ++DAT ++ A++ E W + VL+P V IV L++
Sbjct: 241 INKLRNA-GWDIKKVDATASFREAIRAAKEGEGVAEMQRKIWNKEVLEPCVKIVRSHLDQ 299
>sp|Q9C6L1|IPT6_ARATH Adenylate isopentenyltransferase 6, chloroplastic OS=Arabidopsis
thaliana GN=IPT6 PE=2 SV=1
Length = 342
Score = 180 bits (457), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 164/292 (56%), Gaps = 33/292 (11%)
Query: 2 GATATGKTKLSIDLAIHF-SGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
G T TGK++LS+DLA F E INSDK+Q+YKG +I TN + E+ GVPHHLLG P
Sbjct: 52 GTTGTGKSRLSVDLATRFFPAEIINSDKMQIYKGFEIVTNLIPLHEQGGVPHHLLGQFHP 111
Query: 61 E-ADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED---------------S 104
+ + EF A +I K+I + LPI+VGGSN++ AL+ + S
Sbjct: 112 QDGELTPAEFRSLATLSISKLISSKKLPIVVGGSNSFNHALLAERFDPDIDPFSPGSSLS 171
Query: 105 IINFRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNR--GIRR 162
I Y CC +W+DV VL++++ RVD+M+E+GLV+++ +++DP D R G+R+
Sbjct: 172 TICSDLRYKCCILWVDVLEPVLFQHLCNRVDQMIESGLVEQLAELYDPVVDSGRRLGVRK 231
Query: 163 SIGAPELHEYLKLESNVKNETTNNNKDLLLKKAIQE----IKDNTCKLVDKQVQKIKRLR 218
+IG E Y ++ E DL K A +E +K+ TC+LV KQ +KI +L
Sbjct: 232 TIGVEEFDRYFRV---YPKEMDKGIWDLARKAAYEETVKGMKERTCRLVKKQKEKIMKLI 288
Query: 219 NELGWKIHRIDATYVLEGRMK------DAEDAEDAWEEVVLKPGVAIVEDFL 264
GW+I R+DAT + + + ++ + WE+ ++ V IV+ FL
Sbjct: 289 RG-GWEIKRLDATAAIMAELNQSTAKGEGKNGREIWEKHIVDESVEIVKKFL 339
>sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2 OS=Arabidopsis thaliana GN=IPT2
PE=1 SV=2
Length = 466
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
MG T +GK+KL++DLA HF E IN+D +Q+Y GLD+ TNKVT E++GVPHHLLG V
Sbjct: 26 MGPTGSGKSKLAVDLASHFPVEIINADAMQIYSGLDVLTNKVTVDEQKGVPHHLLGTVSS 85
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRA--NYDCC 115
+ ++ +F + + I++I+ H+P++VGG++ YI+A+V +++ A +CC
Sbjct: 86 DMEFTARDFRDFTVPLIEEIVSRNHIPVLVGGTHYYIQAVVSKFLLDDAAEDTEECC 142
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 31/179 (17%)
Query: 110 ANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPEL 169
+ +D C I MD + VL +YV RVD MV+ GL+DEV D++ P ADY RG+R+SIG E
Sbjct: 222 SRFDYCLICMDAETAVLDRYVEQRVDAMVDAGLLDEVYDIYKPGADYTRGLRQSIGVREF 281
Query: 170 HEYLKL---ESNVKNETTNNNKD--------------------LLLKKAIQEIKDNTCKL 206
++LK+ E+ + T+ +N D ++L++AI +K NT +L
Sbjct: 282 EDFLKIHLSETCAGHLTSLSNDDKVMKENLRKILNFPKDDKLRIMLEEAIDRVKLNTRRL 341
Query: 207 VDKQVQKIKRLRNELGWKIHRIDAT-YVLEGRMKDAEDAEDAWEEVVLKPGVAIVEDFL 264
+ +Q +++ RL GW IH IDAT Y+L +E++W V+KP I+ FL
Sbjct: 342 LRRQKRRVSRLETVFGWNIHYIDATEYIL-------SKSEESWNAQVVKPASEIIRCFL 393
>sp|B9DPA1|MIAA_STACT tRNA dimethylallyltransferase OS=Staphylococcus carnosus (strain
TM300) GN=miaA PE=3 SV=1
Length = 316
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 71/103 (68%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKT+LSI+LA GE I+ D IQVY+G+DI T KVT+ E QGVPH+L+ +DP
Sbjct: 12 VGPTAVGKTELSIELAKKIGGEIISGDSIQVYRGMDIGTAKVTKEEMQGVPHYLIDILDP 71
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
+ + F E A + I +I E GH+PII GG+ YI++L+ D
Sbjct: 72 DEPFSAFAFKERAQKLITEITERGHIPIIAGGTGLYIQSLIYD 114
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 106 INFRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIG 165
+ F NYD I +++ +LY+ + RVD M+E GL+ EV + + + + ++IG
Sbjct: 189 VQFTENYDTLLIGVEMSREILYQRINCRVDSMLEHGLLQEVEQLMNQGYTSCQSM-QAIG 247
Query: 166 APEL 169
EL
Sbjct: 248 YKEL 251
>sp|B1HRH3|MIAA_LYSSC tRNA dimethylallyltransferase OS=Lysinibacillus sphaericus (strain
C3-41) GN=miaA PE=3 SV=1
Length = 300
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 71/103 (68%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA+GKT LSI+LA ++GE IN D +QVYKGLDI T K+TE E +GVPHHLL F++P
Sbjct: 15 VGPTASGKTALSIELAKKYNGEIINGDSMQVYKGLDIGTAKITEEEMEGVPHHLLSFLEP 74
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
A + V ++ + I I LPIIVGGS Y++A++ D
Sbjct: 75 TASFSVADYQKLVREKIADIQARHKLPIIVGGSGLYVQAVLFD 117
Score = 38.1 bits (87), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 28/114 (24%)
Query: 125 VLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR--RSIGAPELHEYLKLESNVKNE 182
VLY + RVD M+E GL++EV+ ++ N RG++ ++IG EL++YL + +
Sbjct: 210 VLYDRINRRVDLMMENGLLEEVQGLWQQNI---RGVQSIQAIGYKELYDYLDGKCS---- 262
Query: 183 TTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIHRIDATYVLEG 236
L+ AI +K N+ + +Q + RN ++D +V+ G
Sbjct: 263 ---------LEGAIDSLKQNSRRYAKRQ---LTYFRN-------KMDVHFVMTG 297
>sp|A4FAJ5|MIAA_SACEN tRNA dimethylallyltransferase OS=Saccharopolyspora erythraea
(strain NRRL 23338) GN=miaA PE=3 SV=1
Length = 310
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 73/103 (70%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G T TGK++L++DLA GE +N+D +Q+YKG+DI T K+T +ER+GVPHHLL +D
Sbjct: 18 VGPTGTGKSELAVDLAEELGGEVVNADAMQLYKGMDIGTAKLTTAERRGVPHHLLDVLDV 77
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
V + HA A+++++E G P++VGGS Y++A+++D
Sbjct: 78 TETASVAAYQRHARHAVEELLEAGRTPLLVGGSGLYVQAVLDD 120
>sp|B7GIA2|MIAA_ANOFW tRNA dimethylallyltransferase OS=Anoxybacillus flavithermus (strain
DSM 21510 / WK1) GN=miaA PE=3 SV=1
Length = 311
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTK+SI LA +GE IN D +QVYKGLDI T K+ + E +G+PHHLL +P
Sbjct: 9 IGPTAVGKTKMSIQLAKRLNGEIINGDSMQVYKGLDIGTAKIRQEETEGIPHHLLDIKEP 68
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
+ V EF A I I + G LPIIVGG+ YI++++ D
Sbjct: 69 HESFSVAEFQTLARSLIKDITKRGKLPIIVGGTGLYIQSVIYD 111
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 14/99 (14%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPELHE 171
Y+ I + ++ LY + RVD+M++ GL++EV+ +++ + I ++IG EL+
Sbjct: 185 YNVALIGLTMEREKLYARINQRVDQMIDQGLIEEVKRLYEQGLRDCQAI-QAIGYKELYA 243
Query: 172 YLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQ 210
Y + L LK+AI+++K N+ + +Q
Sbjct: 244 YF-------------DGMLTLKEAIEQLKQNSRRYAKRQ 269
>sp|A0Q0M8|MIAA_CLONN tRNA dimethylallyltransferase OS=Clostridium novyi (strain NT)
GN=miaA PE=3 SV=1
Length = 314
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 8/119 (6%)
Query: 2 GATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDPE 61
G TA GKT +SI LA +GE I++D +Q+YK +DI + K+TE+E++G+PHHL+ FV P
Sbjct: 10 GPTAVGKTDISIKLAQKLNGEIISADSMQIYKHMDIGSAKITEAEKEGIPHHLIDFVSPF 69
Query: 62 ADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRANYDCCFIWMD 120
++ V EF E + AI I G LP+IVGG+ YI++L+ NYD + D
Sbjct: 70 DEFSVAEFKEKSKNAIKDIASRGKLPMIVGGTGFYIDSLI--------FNYDFANTYKD 120
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 108 FRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAP 167
F Y+ + +++D LY+ + RVD M+E GL++EV+ + + + + IG
Sbjct: 186 FDIPYNVYYFVLNMDRSKLYERINKRVDIMMEKGLIEEVKSLQNMGCTPDMQSMKGIGYK 245
Query: 168 ELHEYL 173
E+ YL
Sbjct: 246 EILYYL 251
>sp|A3CNS2|MIAA_STRSV tRNA dimethylallyltransferase OS=Streptococcus sanguinis (strain
SK36) GN=miaA PE=3 SV=1
Length = 294
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 86/291 (29%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKT LSI++A F+G+ I+ D QVY+GLDI T K+ E++G+PHHLL +
Sbjct: 9 VGPTAVGKTALSIEVAKRFNGQIISGDSQQVYRGLDIGTAKIRPEEQEGIPHHLLDVREV 68
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVE----------DSIINFRA 110
Y +F A +AI +I LPII GG+ YI++L+E + I+ +RA
Sbjct: 69 GESYSAYDFVTEAAQAIREIAAQDQLPIICGGTGLYIQSLLEGYHLGGSVPHEEILAYRA 128
Query: 111 -----------------------------------------------NYDCCFIWMDVDP 123
+Y+ I +D +
Sbjct: 129 QLDSWSDEDLFRKIAELGIEIPQLNRRRAMRALEIAHLGGSLENSQPDYEALLICLDDER 188
Query: 124 LVLYKYVGIRVDKMVETGLVDEVRDMFD--PNADYNRGIRRSIGAPELHEYLKLESNVKN 181
LY+ + RVD M+E GL++E R +++ P + ++G IG EL Y +
Sbjct: 189 ERLYERINHRVDLMLEAGLLEEARWLYEQAPISQASKG----IGYKELFPYFE------- 237
Query: 182 ETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIHRIDATY 232
+ L++A+ +K NT + +Q L W +R+ T+
Sbjct: 238 ------GRMSLEEAVDTLKQNTRRFAKRQ----------LTWFRNRMSVTF 272
>sp|B1YMH0|MIAA_EXIS2 tRNA dimethylallyltransferase OS=Exiguobacterium sibiricum (strain
DSM 17290 / JCM 13490 / 255-15) GN=miaA PE=3 SV=1
Length = 312
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 70/110 (63%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTK I+LA +GE I+ D +QVYK +DI + KVT+ E +G+PHHLL VDP
Sbjct: 12 VGPTAVGKTKTGIELAKKLNGEIISGDSVQVYKQMDIGSAKVTQEEMEGIPHHLLDLVDP 71
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRA 110
+ + V F A AID+I G LPIIVGG+ YI A++ D +A
Sbjct: 72 DDEMSVARFQTLARTAIDEIAAKGKLPIIVGGTGLYIRAILYDYQFTVQA 121
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 26/142 (18%)
Query: 112 YDCC-FIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPELH 170
YD F+ D LY + RVD M+E GLV EV + + + ++IG E+
Sbjct: 187 YDSLLFVLHMEDREQLYDRIDQRVDLMIEQGLVAEVDRLVAAGYRDTKAM-QAIGYKEIV 245
Query: 171 EYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIHRIDA 230
L+ L+ A++++K NT + +Q L W H+ D
Sbjct: 246 PVLEGAP--------------LEPAVEQLKRNTRRFAKRQ----------LTWFRHQFDG 281
Query: 231 TYVLEGRMKDAEDAEDAWEEVV 252
++ GR+ E+ + ++ V
Sbjct: 282 NWIEMGRLSFEENFKIIYDRTV 303
>sp|A8AWX1|MIAA_STRGC tRNA dimethylallyltransferase OS=Streptococcus gordonii (strain
Challis / ATCC 35105 / CH1 / DL1 / V288) GN=miaA PE=3
SV=1
Length = 294
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 86/291 (29%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKT LSI++A F+G+ I+ D QVY+GL+I T K+ E++G+ H+LL D
Sbjct: 9 VGPTAVGKTALSIEVAKAFNGQIISGDSQQVYRGLNIGTAKIRPEEQEGISHYLLDVRDV 68
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVE----------DSIINFRA 110
Y +F A +AI +I G LPII GG+ YI++L+E + I+ +RA
Sbjct: 69 GESYSAYDFVTEATQAIREIEAQGQLPIICGGTGLYIQSLLEGYHLGGSVPHEEILAYRA 128
Query: 111 -----------------------------------------------NYDCCFIWMDVDP 123
+Y+ I +D
Sbjct: 129 QLDSWSDEDLFGKIAELGIEIPQINRRRAMRALEIAHLGGQLENNLPDYEALLICLDDKR 188
Query: 124 LVLYKYVGIRVDKMVETGLVDEVRDMFD--PNADYNRGIRRSIGAPELHEYLKLESNVKN 181
LY+ + RVD M+E GL++E R +FD P + ++G IG EL Y + +
Sbjct: 189 EKLYERINQRVDLMIEDGLLEEARWLFDKAPTSQASKG----IGYKELFPYFAGQVS--- 241
Query: 182 ETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIHRIDATY 232
L++A+ ++K NT + +Q L W +R+ T+
Sbjct: 242 ----------LEEAVDKLKQNTRRFAKRQ----------LTWFRNRMSVTF 272
>sp|B7ISQ9|MIAA_BACC2 tRNA dimethylallyltransferase OS=Bacillus cereus (strain G9842)
GN=miaA PE=3 SV=1
Length = 317
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 71/103 (68%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT++E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTQAEMDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EDSFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M+E GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDLMMEQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y + ++ L+ A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDYFENRAS-------------LEDAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|Q8DT87|MIAA_STRMU tRNA dimethylallyltransferase OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=miaA PE=3 SV=1
Length = 294
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 76/274 (27%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKT L I LA F GE I+ D QVY+ LDI T K T +E+ VPHHL+ +
Sbjct: 9 LGPTAVGKTALGIKLAQQFHGEIISGDSQQVYRKLDIGTAKATAAEQAAVPHHLIDVREV 68
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVE----------DSIINFR- 109
+ +Y +F + A + I I G+LPIIVGG+ Y+++L+E ++++ +R
Sbjct: 69 DENYSAFDFVQEATKEIANICARGYLPIIVGGTGLYLQSLLEGYHLGGQVDHEAVLAYRR 128
Query: 110 ----------------------------------------------ANYDCCFIWMDVDP 123
+ YD I ++ +
Sbjct: 129 ELETLSDTELSQLVETKQIVMTEPNRRRLMRSLELHKFSQGVQNQGSPYDVLLIGLNDNR 188
Query: 124 LVLYKYVGIRVDKMVETGLVDEVRDMFD--PNADYNRGIRRSIGAPELHEYLKLESNVKN 181
LY+ + RVDKM+ GL+DE + ++D P+A RG IG EL Y
Sbjct: 189 QDLYERINARVDKMMAAGLLDEAKWLYDNYPHAQATRG----IGYKELFPYFA------- 237
Query: 182 ETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIK 215
D+ L++A+++IK NT + +Q+ K
Sbjct: 238 ------GDIGLEEAVEKIKQNTRRFAKRQLTWFK 265
>sp|B7HCI3|MIAA_BACC4 tRNA dimethylallyltransferase OS=Bacillus cereus (strain B4264)
GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 71/103 (68%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT++E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKAEMDGIPHYMIDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EDSFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M+E GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDLMMEQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y + ++ L+ A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDYFENRAS-------------LEDAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|Q812Y4|MIAA_BACCR tRNA dimethylallyltransferase OS=Bacillus cereus (strain ATCC 14579
/ DSM 31) GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 71/103 (68%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT++E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKAEMDGIPHYMIDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EDSFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M+E GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDLMMEQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y + ++ L+ A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDYFENRAS-------------LEDAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|A9VR03|MIAA_BACWK tRNA dimethylallyltransferase OS=Bacillus weihenstephanensis
(strain KBAB4) GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 69/103 (66%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE ++ D +Q+Y+ +DI T KVT E G+PH+++ DP
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIVSGDSMQIYRTMDIGTAKVTTDEMDGIPHYMIDIKDP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EDSFSVAEFQESVRKCIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 62/117 (52%), Gaps = 25/117 (21%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RV+ M+E GL++EV+ + + RG+R ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVNLMIEQGLLEEVKGL------HERGVRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGW 223
E+++Y E+ V L++A+ ++K N+ + +Q+ R + ++GW
Sbjct: 247 KEIYDY--FENRVS-----------LEEAVSQLKTNSRRYAKRQLTWF-RNKMDVGW 289
>sp|Q8R5S5|MIAA_THETN tRNA dimethylallyltransferase OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=miaA PE=3 SV=1
Length = 315
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 72/101 (71%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TATGK++L++D+A F+GE +++D +Q+YK +DI T K+T+ E QG+PHH++ V+P
Sbjct: 9 VGPTATGKSRLAVDVAKRFNGEVVSADSMQIYKYMDIGTAKITKEEMQGIPHHMIDIVEP 68
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALV 101
++ V E+ + A I I E G LPIIVGG+ YI ++V
Sbjct: 69 NEEFSVAEYEKRAKAIIKDIHERGKLPIIVGGTGLYINSIV 109
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 112 YDCCFIWMDV-DPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPELH 170
YD I ++ + +LY+ + RVD+M++ LV+EV ++ + +++G E+
Sbjct: 191 YDPIMIGLNYKNRQLLYEKINRRVDEMIKNNLVEEVVNLLKIGYNKYGTSMQALGYKEIV 250
Query: 171 EYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIK 215
EYL N ++ L++A+++IK T + +Q+ K
Sbjct: 251 EYL-------------NGEISLEEAVEKIKKGTRRYAKRQITWFK 282
>sp|Q6HF97|MIAA_BACHK tRNA dimethylallyltransferase OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|Q636W2|MIAA_BACCZ tRNA dimethylallyltransferase OS=Bacillus cereus (strain ZK / E33L)
GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|C1ENE7|MIAA_BACC3 tRNA dimethylallyltransferase OS=Bacillus cereus (strain 03BB102)
GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|C3L886|MIAA_BACAC tRNA dimethylallyltransferase OS=Bacillus anthracis (strain CDC 684
/ NRRL 3495) GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|C3P4Y4|MIAA_BACAA tRNA dimethylallyltransferase OS=Bacillus anthracis (strain A0248)
GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|Q81JG8|MIAA_BACAN tRNA dimethylallyltransferase OS=Bacillus anthracis GN=miaA PE=3
SV=1
Length = 314
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 10 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 69
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 70 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 112
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 190 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 243
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 244 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 280
Query: 227 RIDATY 232
++D T+
Sbjct: 281 KMDVTW 286
>sp|B7HKR9|MIAA_BACC7 tRNA dimethylallyltransferase OS=Bacillus cereus (strain AH187)
GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|A0RH88|MIAA_BACAH tRNA dimethylallyltransferase OS=Bacillus thuringiensis (strain Al
Hakam) GN=miaA PE=3 SV=1
Length = 320
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 16 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 75
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 76 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 118
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 196 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 249
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 250 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 286
Query: 227 RIDATY 232
++D T+
Sbjct: 287 KMDVTW 292
>sp|B9IUM7|MIAA_BACCQ tRNA dimethylallyltransferase OS=Bacillus cereus (strain Q1)
GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|Q733B9|MIAA_BACC1 tRNA dimethylallyltransferase OS=Bacillus cereus (strain ATCC
10987) GN=miaA PE=3 SV=1
Length = 317
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEMDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|A5D2K7|MIAA_PELTS tRNA dimethylallyltransferase OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=miaA PE=3 SV=1
Length = 314
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 73/102 (71%)
Query: 2 GATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDPE 61
G TATGK+++ + +A GE I++D + +Y+G+DI T K T ++R+G+PHH++ V+P+
Sbjct: 15 GPTATGKSEVGVLVAEKLGGEIISADSMLIYRGMDIGTAKPTSADRRGIPHHMIDIVEPD 74
Query: 62 ADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
DY V + + A+ I K++E G+LPI+VGG+ YIEAL+ +
Sbjct: 75 QDYNVALYRKQAMAVIKKVLERGNLPIVVGGTGLYIEALIRN 116
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDM----FDPNADYNRGIRRSIGAP 167
++ + ++ LY+ + RVD+M+ GL++EV+++ F P + RG +G
Sbjct: 193 FNLLMFGLTMEREALYRRIEKRVDRMIAMGLIEEVQNLLQRGFSPRLNSMRG----LGYK 248
Query: 168 ELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGW 223
E+ YL N L L++A++ +K NT + +Q+ +R + E+ W
Sbjct: 249 EMISYL-------------NGTLSLEEAVEVLKRNTRRFAKRQMTWFRRYK-EIRW 290
>sp|B2GD80|MIAA_LACF3 tRNA dimethylallyltransferase OS=Lactobacillus fermentum (strain
NBRC 3956 / LMG 18251) GN=miaA PE=3 SV=1
Length = 307
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKT LS+ +A F GE I+ D +QVY+GLDI T K T ER VPHHL+ D
Sbjct: 8 VGPTAVGKTALSLRVAQKFGGEVISGDSMQVYRGLDIGTAKATTEERSLVPHHLIDVKDI 67
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
+ V +F A R ID+I + GHLP++VGG+ Y++ALVE+
Sbjct: 68 HDRFSVADFKVAAEREIDQITDRGHLPLVVGGTGFYLQALVEN 110
Score = 35.0 bits (79), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 110 ANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPEL 169
A D I + VLY+ + RVD+MV GL++E + ++D + N + IG EL
Sbjct: 186 AKNDFLIIGLTTQRPVLYQRINQRVDQMVANGLLEEAKWLYDQGGE-NEQAGKGIGYREL 244
Query: 170 HEYL 173
+
Sbjct: 245 FPHF 248
>sp|B7JIE1|MIAA_BACC0 tRNA dimethylallyltransferase OS=Bacillus cereus (strain AH820)
GN=miaA PE=3 SV=1
Length = 317
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSIDLA +GE I+ D +Q+Y+ +DI T KVT+ E G+PH+++ +P
Sbjct: 13 IGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKEEVDGIPHYMVDIKNP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E + I +I E G LPIIVGG+ YI++++ D
Sbjct: 73 EESFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFD 115
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M++ GL++EV + YNRGIR ++IG
Sbjct: 193 YDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEGL------YNRGIRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIH 226
E+++Y E V L++A+ ++K N+ + +Q L W +
Sbjct: 247 KEIYDY--FEDRVS-----------LEEAVSQLKTNSRRYAKRQ----------LTWFRN 283
Query: 227 RIDATY 232
++D T+
Sbjct: 284 KMDVTW 289
>sp|B9L505|MIAA_THERP tRNA dimethylallyltransferase OS=Thermomicrobium roseum (strain
ATCC 27502 / DSM 5159 / P-2) GN=miaA PE=3 SV=1
Length = 329
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G T+ GKT +I+LA+ F GE +++D +Y+G+DI T+K T ER+GVPHHL+ +DP
Sbjct: 11 VGPTSVGKTATAIELALTFGGEVVSADSRYLYRGMDIGTDKPTLEERRGVPHHLIDILDP 70
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVE 102
DY + F A RAI++I G LPI+ GG+ Y+ AL+E
Sbjct: 71 RDDYSLALFQRDAQRAIEEIHARGRLPIVAGGTPLYLRALLE 112
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 126 LYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPELHEYLKLESNVKNETTN 185
LY+ + RVD+ V GLV+EV+ + + + ++G ++ +L
Sbjct: 203 LYRRIDERVDRQVARGLVEEVQRLLEQGVPPDAPAMTALGYRQIVAFL------------ 250
Query: 186 NNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRN 219
L L++AIQ IK +T + Q+ ++R++
Sbjct: 251 -TGQLSLEEAIQRIKYDTHRYARHQLTWLRRMKQ 283
>sp|B1MXL9|MIAA_LEUCK tRNA dimethylallyltransferase OS=Leuconostoc citreum (strain KM20)
GN=miaA PE=3 SV=1
Length = 294
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 75/110 (68%)
Query: 2 GATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDPE 61
G TA+GK+ L+I +A F+GE +++D +Q+Y+GLDI T KVT++ER+ VPHHL+ VD
Sbjct: 9 GPTASGKSDLAISVAQRFNGEIVSADAMQIYRGLDIGTAKVTKAERELVPHHLIDIVDMT 68
Query: 62 ADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRAN 111
+ V EF A + I+ I + G LP+I GG+ Y++AL+ ++F A+
Sbjct: 69 DKFSVAEFVTRADQVINDIAKRGKLPVIAGGTGFYVKALLGQQPLDFVAS 118
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 109 RANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPE 168
R YD + +D +LY+ + R KM++ GL+ EV + + + ++IG E
Sbjct: 175 RPTYDALIVGIDWPREILYERINRRAQKMLDDGLLSEVEHIMSVGGESIQA-GKAIGYKE 233
Query: 169 LHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIHRI 228
Y ++ E T ++A+ ++ ++ + +Q+ ++ L W +H
Sbjct: 234 FFPY------IRGEVTR-------EQALLAVQQDSRRYAKRQLTYLRHQIPGLIW-LHGT 279
Query: 229 DATYVLEGRMK 239
DA L +K
Sbjct: 280 DAATKLTSEVK 290
>sp|B0K1A4|MIAA_THEPX tRNA dimethylallyltransferase OS=Thermoanaerobacter sp. (strain
X514) GN=miaA PE=3 SV=1
Length = 315
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 73/101 (72%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA+GK+KL++D+A F+GE I++D +QVYK +D+ T K+T+ E QG+PH+L+ V+P
Sbjct: 9 VGPTASGKSKLAVDVAKEFNGEIISADSMQVYKYMDVGTAKITKEEMQGIPHYLIDIVEP 68
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALV 101
+ ++ V E+ + A I I + G LPIIVGG+ YI +++
Sbjct: 69 DQEFSVAEYEKRAKEIIKDIYKRGKLPIIVGGTGLYINSII 109
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 55 LGFVDPEADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRANYDC 114
L VDPEA ++ + +R I + +E G +Y + + S + Y
Sbjct: 143 LKSVDPEA---AKKIHPNDIRRIIRALEVYEF---TGKPISYYQKM---SGMRLNPEYQP 193
Query: 115 CFIWMDV-DPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPELHEYL 173
I ++ D +LY + RVD+M++ LV+EV ++ + + +++G E+ EYL
Sbjct: 194 IMIGLNFRDRQILYDRINQRVDEMIKNNLVEEVVNLLKIGYNKDSTAMQALGYKEIVEYL 253
Query: 174 KLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQV 211
K E + L++AI++IK T + +Q+
Sbjct: 254 KGE-------------ISLEEAIEKIKKGTRRYAKRQI 278
>sp|B0K9L7|MIAA_THEP3 tRNA dimethylallyltransferase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=miaA PE=3
SV=1
Length = 315
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 73/101 (72%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA+GK+KL++D+A F+GE I++D +QVYK +D+ T K+T+ E QG+PH+L+ V+P
Sbjct: 9 VGPTASGKSKLAVDVAKEFNGEIISADSMQVYKYMDVGTAKITKEEMQGIPHYLIDIVEP 68
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALV 101
+ ++ V E+ + A I I + G LPIIVGG+ YI +++
Sbjct: 69 DQEFSVAEYEKRAKEIIKDIYKRGKLPIIVGGTGLYINSII 109
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 55 LGFVDPEADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRANYDC 114
L VDPEA ++ + +R I + +E G +Y + + S + Y
Sbjct: 143 LKSVDPEA---AKKIHPNDIRRIIRALEVYEF---TGKPISYYQKM---SGMRLNPEYQP 193
Query: 115 CFIWMDV-DPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPELHEYL 173
I ++ D +LY + RVD+M++ LV+EV ++ + + +++G E+ EYL
Sbjct: 194 IMIGLNFRDRQILYDRINQRVDEMIKNNLVEEVVNLLKIGYNKDSTAMQALGYKEIVEYL 253
Query: 174 KLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQV 211
K E + L++AI++IK T + +Q+
Sbjct: 254 KGE-------------ISLEEAIEKIKKGTRRYAKRQI 278
>sp|B1MD01|MIAA_MYCA9 tRNA dimethylallyltransferase OS=Mycobacterium abscessus (strain
ATCC 19977 / DSM 44196) GN=miaA PE=3 SV=1
Length = 313
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 70/103 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TATGK+ L+++LA GE +N+D +Q+Y+G+DI T KV E ER+G+ HH+L +D
Sbjct: 8 IGPTATGKSALALELAERLGGEIVNADAMQLYRGMDIGTAKVPECERRGLVHHMLDVLDV 67
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
V + E A+ ID I GH+P+IVGGS YI+AL++D
Sbjct: 68 TETATVATYQERAVATIDDIRARGHVPVIVGGSMMYIQALLDD 110
>sp|C4L1B9|MIAA_EXISA tRNA dimethylallyltransferase OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=miaA PE=3 SV=1
Length = 311
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 67/103 (65%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTK I+LA F GE ++ D +QVY+G+DI + KVT+ E +G+PHHL+ DP
Sbjct: 10 VGPTAVGKTKTGIELAKAFDGEIVSGDSVQVYRGMDIGSAKVTKEEAEGIPHHLIDICDP 69
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
+ V F + A AID I G LPIIVGG+ YI +++ D
Sbjct: 70 DDAMSVAMFQQLARAAIDDIYARGKLPIIVGGTGLYIRSILYD 112
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 24/127 (18%)
Query: 111 NYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPELH 170
+YD + D +LY + RVD M+E GLV+EV + + + R+IG E+
Sbjct: 185 HYDYRLFVLHADREILYDRINQRVDAMMEAGLVEEVERLLAQGYRDTQAM-RAIGYKEII 243
Query: 171 EYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIKRLRNELGWKIHRIDA 230
Y V+ + + + LLK+ ++ + +L W H+ D
Sbjct: 244 PY------VEGKISKDRATDLLKQHTRQFA-----------------KRQLTWFRHQFDG 280
Query: 231 TYVLEGR 237
+V GR
Sbjct: 281 IWVDMGR 287
>sp|Q820U0|MIAA_ENTFA tRNA dimethylallyltransferase OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=miaA PE=3 SV=1
Length = 309
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKT LSI LA F+GE I+ D +QVY+ LDI T KVTE+E++G+PH+L+ +
Sbjct: 8 VGPTAVGKTALSIALAKKFNGEIISGDSMQVYRSLDIGTAKVTETEKEGIPHYLIDCREV 67
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFR 109
Y +F + + I +I E G LPIIVGG+ YI++L+ D + R
Sbjct: 68 SETYSAADFQKEGRQKIKEITEKGKLPIIVGGTGLYIQSLLYDFQLGSR 116
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMF-DPNADYNRGIRRSIGAPELH 170
YD + ++ D +LY+ + RVD+M+ GL++E + MF P+A +G IG E
Sbjct: 188 YDYYLLGLETDRALLYERINQRVDQMMTEGLLEEAKQMFQQPHAQAAQG----IGYKEFF 243
Query: 171 EYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQV 211
Y E + L+ A++ +K + + +Q+
Sbjct: 244 PYFSGEQS-------------LEMAVETVKQQSRRYAKRQL 271
>sp|Q8CXG5|MIAA_OCEIH tRNA dimethylallyltransferase OS=Oceanobacillus iheyensis (strain
DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=miaA PE=3
SV=1
Length = 313
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 68/101 (67%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GK+ L I++A F+GE I+ D QVYKG+DI T KVT+ E G+ HH++ + P
Sbjct: 9 VGPTAVGKSLLGIEMAKRFNGEVISGDSTQVYKGMDIGTAKVTKEEMDGIMHHMIDIISP 68
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALV 101
+ + V +F HA + ID ++ G LPI+VGGS YI+A++
Sbjct: 69 DESFSVADFQLHAKKCIDDVLGRGKLPILVGGSGLYIQAVL 109
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 107 NFRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFD 151
+ Y I +D+D VLY + RVD M++TGL++EVRD+ D
Sbjct: 184 QLESPYHLILIGLDMDRDVLYDRINQRVDHMIDTGLIEEVRDLID 228
>sp|Q9CHU2|MIAA_LACLA tRNA dimethylallyltransferase OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=miaA PE=3 SV=1
Length = 294
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 74/113 (65%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKT L IDLAI F+GE I+ D QVY+GLDI T KVT +E+ VPHHL+
Sbjct: 10 VGPTAVGKTALGIDLAIKFNGEIISGDSQQVYQGLDIGTAKVTMAEQAQVPHHLIDVRKW 69
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRANYD 113
++ V +F A + I +I++ G +PIIVGG+ YI++L+E + + N++
Sbjct: 70 TENFSVHDFVIEANQLIKEILDQGKVPIIVGGTGLYIQSLIEGYHLGGQENHE 122
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 107 NFRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGA 166
N ++YD I ++ D VLY + RVD+M+ GL+DE R +++ + + IG
Sbjct: 173 NLGSDYDFLLIGLNADRKVLYDRINQRVDQMMREGLLDEARTLYEQAPEVQAA--KGIGY 230
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQVQKIK 215
E Y + D+ L++A++ +K N+ + +Q+ K
Sbjct: 231 KEFFPYF-------------SGDISLEEAVELVKRNSRRYAKRQLTWFK 266
>sp|O31795|MIAA_BACSU tRNA dimethylallyltransferase OS=Bacillus subtilis (strain 168)
GN=miaA PE=3 SV=2
Length = 314
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKT LSI LA + E I+ D +Q+YKG+DI T K+TE E +GVPHHL+ +DP
Sbjct: 12 VGPTAVGKTNLSIQLAKSLNAEIISGDSMQIYKGMDIGTAKITEQEMEGVPHHLIDILDP 71
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVEDSIINFRANYDCCF 116
+ + ++ I +I G LP+IVGG+ YI++++ D AN D F
Sbjct: 72 QDSFSTADYQSLVRNKISEIANRGKLPMIVGGTGLYIQSVLYDYTFTEEAN-DPVF 126
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGAPELHE 171
Y+ I + +D LY+ + RVD M+++GL+ EV+ ++D N + I ++IG EL+
Sbjct: 192 YNAVLIGLTMDRDTLYERINQRVDLMMQSGLLPEVKRLYDKNVRDCQSI-QAIGYKELYA 250
Query: 172 YLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQV 211
Y + + L A++++K N+ + +Q+
Sbjct: 251 YF-------------DGFVTLSDAVEQLKQNSRRYAKRQL 277
>sp|B2GKG9|MIAA_KOCRD tRNA dimethylallyltransferase OS=Kocuria rhizophila (strain ATCC
9341 / DSM 348 / NBRC 103217 / DC2201) GN=miaA PE=3 SV=1
Length = 313
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 68/102 (66%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G T TGK++L+I LA GE +N+D +Q+Y+G+D+ T K+T ERQGVPHHLL ++
Sbjct: 19 VGPTGTGKSELAIALARELDGEVVNADALQLYRGMDVGTAKLTPEERQGVPHHLLDVLEI 78
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVE 102
+ V F A RA+D+I G +P++VGGS Y+ A ++
Sbjct: 79 HEEASVAAFQRDARRAVDEIRGRGRVPVLVGGSGLYVRAALD 120
>sp|A7GR71|MIAA_BACCN tRNA dimethylallyltransferase OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=miaA PE=3 SV=1
Length = 316
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 69/103 (66%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA GKTKLSI+LA +GE ++ D +Q+Y+ +DI T KVT E +G+PH+++ DP
Sbjct: 13 IGPTAVGKTKLSIELAKALNGEIVSGDSMQIYRTMDIGTAKVTADEMEGIPHYMIDIKDP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALVED 103
E + V EF E I +I + G LPIIVGG+ YI++++ D
Sbjct: 73 EDSFSVAEFQELVRGHIREITKRGKLPIIVGGTGLYIQSVLYD 115
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 24/105 (22%)
Query: 112 YDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIR-----RSIGA 166
YD I + +D +LY + +RVD M+E GL EV+ + Y G+R ++IG
Sbjct: 193 YDVVLIGLTMDRTMLYDRINLRVDLMMEQGLEQEVKRL------YQNGVRDCQSIQAIGY 246
Query: 167 PELHEYLKLESNVKNETTNNNKDLLLKKAIQEIKDNTCKLVDKQV 211
EL+ Y ++ L++AI ++K N+ + +Q+
Sbjct: 247 KELYRYFAGATS-------------LEEAISQLKTNSRRYAKRQL 278
>sp|Q8CQL3|MIAA_STAES tRNA dimethylallyltransferase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=miaA PE=1 SV=1
Length = 332
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 70/101 (69%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA+GKT+LSI++A F+GE I+ D +QVY+G+DI T KVT E +G+PH+++ + P
Sbjct: 13 VGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALV 101
+A + EF + A + I I G +PII GG+ YI++L+
Sbjct: 73 DASFSAYEFKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLL 113
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 107 NFRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGA 166
F NYD I +++ LY + RVD M+ GL +EV+ + + + ++ + ++IG
Sbjct: 191 QFTENYDTLLIGIEMSRETLYLRINKRVDIMLGHGLFNEVQHLVEQGFEASQSM-QAIGY 249
Query: 167 PEL 169
EL
Sbjct: 250 KEL 252
>sp|Q5HPN8|MIAA_STAEQ tRNA dimethylallyltransferase OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=miaA PE=3 SV=1
Length = 332
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 70/101 (69%)
Query: 1 MGATATGKTKLSIDLAIHFSGEAINSDKIQVYKGLDIATNKVTESERQGVPHHLLGFVDP 60
+G TA+GKT+LSI++A F+GE I+ D +QVY+G+DI T KVT E +G+PH+++ + P
Sbjct: 13 VGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPP 72
Query: 61 EADYPVEEFCEHALRAIDKIIENGHLPIIVGGSNTYIEALV 101
+A + EF + A + I I G +PII GG+ YI++L+
Sbjct: 73 DASFSAYEFKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLL 113
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 107 NFRANYDCCFIWMDVDPLVLYKYVGIRVDKMVETGLVDEVRDMFDPNADYNRGIRRSIGA 166
F NYD I +++ LY + RVD M+ GL +EV+ + + + ++ + ++IG
Sbjct: 191 QFTENYDTLLIGIEMSRETLYLRINKRVDIMLGHGLFNEVQHLVEQGFEASQSM-QAIGY 249
Query: 167 PEL 169
EL
Sbjct: 250 KEL 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,971,366
Number of Sequences: 539616
Number of extensions: 4646498
Number of successful extensions: 17138
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 15635
Number of HSP's gapped (non-prelim): 1413
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)