Query 044049
Match_columns 139
No_of_seqs 102 out of 1030
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 19:09:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044049.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044049hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 99.7 3.9E-19 1.3E-23 122.6 3.4 81 39-122 1-90 (93)
2 2rkn_A DIR1 protein, AT5G48485 99.6 4.9E-17 1.7E-21 108.1 1.8 74 39-116 2-75 (77)
3 1afh_A Maize nonspecific lipid 99.6 3.8E-16 1.3E-20 107.4 3.9 78 40-122 2-91 (93)
4 2alg_A Non-specific lipid tran 99.6 3.7E-16 1.3E-20 107.2 2.6 72 40-116 2-80 (92)
5 1siy_A LTP 1, NS-LTP1, nonspec 99.6 8.2E-16 2.8E-20 105.3 4.1 77 40-122 1-89 (91)
6 1t12_A LTP 1, nonspecific lipi 99.6 1.3E-15 4.5E-20 104.4 3.3 76 40-122 2-89 (91)
7 1bwo_A NS-LTP1, nonspecific li 99.5 1.2E-15 3.9E-20 104.4 2.5 71 40-116 1-79 (90)
8 1n89_A Lipid transfer protein; 99.4 4.4E-14 1.5E-18 91.7 2.0 61 47-115 5-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.4 2.9E-14 9.9E-19 93.0 0.1 64 47-121 6-69 (69)
10 1hyp_A Hydrophobic protein fro 97.5 4.5E-05 1.5E-09 50.7 2.4 67 48-121 10-78 (80)
11 3ob4_A Conglutin, maltose ABC 94.2 0.0041 1.4E-07 52.2 -1.8 54 67-123 429-491 (500)
12 1s6d_A Albumin 8; all helix, f 92.6 0.37 1.3E-05 32.9 6.3 73 39-114 8-98 (103)
13 1sm7_A Recombinant IB pronapin 90.1 0.061 2.1E-06 37.0 0.2 75 42-121 5-105 (109)
14 1psy_A 2S albumin, RICC3; albu 88.9 0.27 9.1E-06 34.8 2.8 71 39-112 15-116 (125)
15 1w2q_A Conglutin, ARA H 6; all 85.2 0.88 3E-05 32.2 3.8 82 38-122 12-119 (127)
16 2ds2_B Sweet protein mabinlin- 84.3 0.29 1E-05 31.4 0.9 52 66-122 7-69 (72)
17 1pnb_B Napin BNIB; napin IA an 82.1 0.15 5.2E-06 32.9 -1.2 54 64-122 9-72 (75)
18 2lvf_A 2S albumin; allergen, c 79.5 0.2 7E-06 34.8 -1.4 77 40-122 6-107 (114)
19 1bea_A Bifunctional amylase/se 67.1 2.8 9.6E-05 29.7 2.0 71 48-122 16-117 (127)
20 1hss_A 0.19 alpha-amylase inhi 65.7 1 3.5E-05 31.9 -0.5 68 48-118 16-108 (124)
21 1b1u_A Protein (alpha-amylase/ 64.3 1.6 5.4E-05 30.8 0.3 67 48-117 16-110 (122)
22 1zo0_A ODC-AZ, ornithine decar 23.9 35 0.0012 24.0 1.7 15 125-139 110-124 (126)
23 2cvc_A Cytochrome CC3, high-mo 22.1 19 0.00064 30.7 0.0 17 1-17 1-17 (545)
24 3ucp_A UNDA; beta-barrel, C-ty 21.8 19 0.00066 30.5 0.0 23 1-23 1-23 (874)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.75 E-value=3.9e-19 Score=122.62 Aligned_cols=81 Identities=27% Similarity=0.636 Sum_probs=68.7
Q ss_pred CCCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----CcccccccccccccCCCCCCHHHHHHhhhhcCCC
Q 044049 39 SGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----NFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAIS 113 (139)
Q Consensus 39 ~~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~ 113 (139)
+.+|++++..|.||++|++++ ..|++.||++++++++. |++|+|+++++......+||.+||.+||++||++
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~---~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~ 77 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGG---PGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVN 77 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTS---SCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHhHHHHHcCC---CCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCC
Confidence 368999999999999999985 36999999999999764 6899999999866434479999999999999999
Q ss_pred CCC----CCCCCC
Q 044049 114 APP----LKKCGV 122 (139)
Q Consensus 114 ~p~----~~~C~~ 122 (139)
+|+ .++|+.
T Consensus 78 ~p~~Is~~~dC~~ 90 (93)
T 2ljo_A 78 IPYKISTTTNCNT 90 (93)
T ss_dssp CSSCCSTTCCGGG
T ss_pred CCCCCCCCCCCCC
Confidence 983 346754
No 2
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.63 E-value=4.9e-17 Score=108.09 Aligned_cols=74 Identities=24% Similarity=0.513 Sum_probs=62.5
Q ss_pred CCCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCCC
Q 044049 39 SGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPP 116 (139)
Q Consensus 39 ~~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p~ 116 (139)
..+|++++.+|.||++|++++ ....|+++||++|++ .|+.|||.+++++....++||.++|+.||++||+++|+
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~-~~~~Ps~~CC~~lk~---~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~ 75 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKE-NPTSPSQPCCTALQH---ADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP 75 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSS-SCCCCCHHHHHHHTT---CCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCC
T ss_pred cchHHhHHHhHhhCHHHHcCC-CCCCCCHHHHHHHHh---cCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCC
Confidence 367999999999999999974 246899999999998 47899999988642223479999999999999999875
No 3
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.60 E-value=3.8e-16 Score=107.36 Aligned_cols=78 Identities=27% Similarity=0.661 Sum_probs=61.4
Q ss_pred CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----C--cccccccccccccCCC-CCCHHHHHHhhhhcC
Q 044049 40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----N--FHCICEAIKSSSDLGL-DLNLTRAFTLSSDCA 111 (139)
Q Consensus 40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~--~~CLC~~i~~~~~~~~-~in~~ra~~LP~~Cg 111 (139)
.+|++++..|.||++|+++++ ..|++.||++++++++. | ..|+| ++.... ++ +||.++|++||++||
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC--~~~~~~-~~~~in~~~A~~LP~~C~ 76 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAA-GVSGLNAGNAASIPSKCG 76 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSC--CSCCHHHHHHHHHHHHHCCSSHHHHHHHHH--HHHHHT-TSTTCCHHHHHHHHHHHH
T ss_pred CChHHHHHhccCcHHHHcCCC--CCChHHHHHHHHHHHHhhcCCCCCcccCEe--eccccc-cccCcCHHHHHHHHHHcC
Confidence 579999999999999999863 57999999999999742 3 35666 443322 33 799999999999999
Q ss_pred CCCCC----CCCCCC
Q 044049 112 ISAPP----LKKCGV 122 (139)
Q Consensus 112 v~~p~----~~~C~~ 122 (139)
+++|+ ..+|+.
T Consensus 77 v~~p~~is~~~dC~~ 91 (93)
T 1afh_A 77 VSIPYTISTSTDCSR 91 (93)
T ss_dssp CCCSSCCSTTCCSSS
T ss_pred CCCCCCCCCCCCCcc
Confidence 99885 246754
No 4
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.58 E-value=3.7e-16 Score=107.23 Aligned_cols=72 Identities=26% Similarity=0.547 Sum_probs=59.4
Q ss_pred CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhc-------cCcccccccccccccCCCCCCHHHHHHhhhhcCC
Q 044049 40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIK-------SNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAI 112 (139)
Q Consensus 40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~-------~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv 112 (139)
.+|++++..|.||++|+++++ .|+++||++++++++ .+..|+|....... ++ +||.++|++||++||+
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~---~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~-~~-~in~~~A~~LP~~Cgv 76 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSAS-VP-GVNPNNAAALPGKCGV 76 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCS---CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHH-ST-TCCHHHHHHHHHHTTC
T ss_pred CChHHHHHhccCcHHHHcCCC---CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccc-cC-ccChHHHHHHHHHcCC
Confidence 579999999999999999863 588999999999973 23679997543221 44 8999999999999999
Q ss_pred CCCC
Q 044049 113 SAPP 116 (139)
Q Consensus 113 ~~p~ 116 (139)
++|+
T Consensus 77 ~~p~ 80 (92)
T 2alg_A 77 SIPY 80 (92)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9885
No 5
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.58 E-value=8.2e-16 Score=105.30 Aligned_cols=77 Identities=29% Similarity=0.683 Sum_probs=61.3
Q ss_pred CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----Cc--ccccccccccccCCC-CCCHHHHHHhhhhcC
Q 044049 40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----NF--HCICEAIKSSSDLGL-DLNLTRAFTLSSDCA 111 (139)
Q Consensus 40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~~--~CLC~~i~~~~~~~~-~in~~ra~~LP~~Cg 111 (139)
.+|++++..|.||++|+++++ . |++.||++++++++. |+ .|+| +++.. .++ +||.++|++||++||
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~--~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~-~~~~~in~~~A~~LP~~Cg 74 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGG--V-VPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAA-GAVRGINPNNAEALPGKCG 74 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCS--C-CCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHT-TCCSSCCHHHHHHHHHHHT
T ss_pred CCHHHHHHhccCcHHHHhCCC--C-CcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcc-cccCCcCHHHHHHHHHHcC
Confidence 369999999999999999863 3 999999999999754 44 5777 45543 244 799999999999999
Q ss_pred CCCCC----CCCCCC
Q 044049 112 ISAPP----LKKCGV 122 (139)
Q Consensus 112 v~~p~----~~~C~~ 122 (139)
+++|+ ..+|+.
T Consensus 75 v~~p~~is~~~dC~~ 89 (91)
T 1siy_A 75 VNIPYKISTSTNCNS 89 (91)
T ss_dssp CCCSSCSCTTSCSST
T ss_pred CCCCCCCCCCCCCcc
Confidence 99885 246754
No 6
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.56 E-value=1.3e-15 Score=104.37 Aligned_cols=76 Identities=32% Similarity=0.749 Sum_probs=60.8
Q ss_pred CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-------Cccccccccccccc-CCCCCCHHHHHHhhhhcC
Q 044049 40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-------NFHCICEAIKSSSD-LGLDLNLTRAFTLSSDCA 111 (139)
Q Consensus 40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-------~~~CLC~~i~~~~~-~~~~in~~ra~~LP~~Cg 111 (139)
.+|++++..|.||++|+++++ . |+ .||++++++++. +..|+| +++... ++ +||.++|++||++||
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~ 74 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTG--P-LG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCG 74 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSS--C-CT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHCT-TCCHHHHHHHHHHTT
T ss_pred CChHHHHHhccCcHHHHcCCC--C-hH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccccC-CcChhHHHHHHHHcC
Confidence 579999999999999999863 4 88 999999999764 246777 454432 33 899999999999999
Q ss_pred CCCCC----CCCCCC
Q 044049 112 ISAPP----LKKCGV 122 (139)
Q Consensus 112 v~~p~----~~~C~~ 122 (139)
+++|+ .++|+.
T Consensus 75 v~~p~~is~~~dC~~ 89 (91)
T 1t12_A 75 VNIPYKISPSTDCSK 89 (91)
T ss_dssp CCCSSCSSSSSCCTT
T ss_pred CCCCCCCCCCCCCcc
Confidence 99885 246754
No 7
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.55 E-value=1.2e-15 Score=104.41 Aligned_cols=71 Identities=27% Similarity=0.673 Sum_probs=58.2
Q ss_pred CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----C--cccccccccccccCCC-CCCHHHHHHhhhhcC
Q 044049 40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----N--FHCICEAIKSSSDLGL-DLNLTRAFTLSSDCA 111 (139)
Q Consensus 40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~--~~CLC~~i~~~~~~~~-~in~~ra~~LP~~Cg 111 (139)
.+|++++..|.||++|+++++ . |+++||++++++++. | ..|+| +++... ++ +||.++|++||++||
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~--~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~-~~~~in~~~A~~LP~~C~ 74 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGP--G-PSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIAR-GIHNLNEDNARSIPPKCG 74 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCS--C-CCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHT-TCTTCCHHHHHTHHHHHT
T ss_pred CCHHHHHHhhcccHHHHcCCC--C-CCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchh-ccCCcCHHHHHHHHHHcC
Confidence 369999999999999999863 3 999999999999753 2 35777 555442 34 799999999999999
Q ss_pred CCCCC
Q 044049 112 ISAPP 116 (139)
Q Consensus 112 v~~p~ 116 (139)
+++|+
T Consensus 75 v~~p~ 79 (90)
T 1bwo_A 75 VNLPY 79 (90)
T ss_dssp CCCSS
T ss_pred CCCCC
Confidence 99885
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.41 E-value=4.4e-14 Score=91.67 Aligned_cols=61 Identities=23% Similarity=0.577 Sum_probs=52.7
Q ss_pred hcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCC
Q 044049 47 YNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAP 115 (139)
Q Consensus 47 ~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p 115 (139)
..|.||++|++++ ..|+++||++|++. ..|+|.++++.. ++..||.++|++||++||+++|
T Consensus 5 ~~L~pC~~~v~~~---~~Ps~~CC~~lk~~----~~ClC~~~k~~~-~~~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 5 SQLAVCASAILSG---AKPSGECCGNLRAQ----QGCFCQYAKDPT-YGQYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp STTHHHHHHHTTC---CCCCHHHHHHHHHH----SSHHHHGGGCST-THHHHTCHHHHHHHHHHTSCCS
T ss_pred hhcccCHHHHcCC---CCCCHHHHHhhCCC----CCCCCccccCcc-cccccCHHHHHHHHHHcCCCCC
Confidence 4789999999975 37999999999974 789999998764 3446999999999999999986
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.39 E-value=2.9e-14 Score=93.03 Aligned_cols=64 Identities=28% Similarity=0.607 Sum_probs=54.4
Q ss_pred hcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCCCCCCCC
Q 044049 47 YNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCG 121 (139)
Q Consensus 47 ~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p~~~~C~ 121 (139)
..|.||++|++++ ..|+++||++|++. ..|+|.++++.. +...||.++|++||++||+++| +|+
T Consensus 6 ~~L~pC~~~v~~~---~~Ps~~CC~~lk~~----~~ClC~~~k~~~-~~~~in~~~A~~Lp~~Cgv~~P---~C~ 69 (69)
T 1l6h_A 6 GQLTVCTGAIAGG---ARPTAACCSSLRAQ----QGCFCQFAKDPR-YGRYVNSPNARKAVSSCGIALP---TCH 69 (69)
T ss_dssp TTHHHHHHHHTTC---CSTTHHHHHHHHHH----HHHHHHHTTCSS-HHHHTTTTTGGGCCCCCSSCSC---CCC
T ss_pred hhcccCHHHHcCC---CCCCHHHHHhhCCC----CCCCCccccCcc-cccccCHHHHHHHHHHcCCCCC---CCC
Confidence 4789999999975 36999999999974 689999998754 3446999999999999999986 564
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=97.50 E-value=4.5e-05 Score=50.71 Aligned_cols=67 Identities=30% Similarity=0.628 Sum_probs=53.8
Q ss_pred cccccHHHhhCCCCCCCCChhHHHHHHhhhccCc-ccccccccccccCCCCCCHHHHHHh-hhhcCCCCCCCCCCC
Q 044049 48 NLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNF-HCICEAIKSSSDLGLDLNLTRAFTL-SSDCAISAPPLKKCG 121 (139)
Q Consensus 48 ~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~-~CLC~~i~~~~~~~~~in~~ra~~L-P~~Cgv~~p~~~~C~ 121 (139)
+|.-|.+.+.+. ..|...||+-++.+.+.|. .|||..++- +++ +|....+++ -..||..+|++++|.
T Consensus 10 kLgvCanvL~g~---~~~~~~CC~Ll~GL~dleAAvCLCtaik~---Lgi-lnlpv~L~llln~Cgk~~P~gF~C~ 78 (80)
T 1hyp_A 10 DLSICLNILGGS---LGTVDDCCALIGGLGDIEAIVCLCIQLRA---LGI-LNLNRNLQLILNSCGRSYPSNATCP 78 (80)
T ss_dssp CCGGGGGGGGTC---CTTHHHHHHHHHTSCHHHHHHHHHHHHHH---HTC-SCHHHHHHHHHHHTTCSSCCCCCCS
T ss_pred chhHHHHHhCcC---CCCCCccchhhhCcchhhhhhhhhhhccc---cce-eecChhHHHHHHHhCCcCcCCCCCC
Confidence 688899988542 2467889999999987764 799999982 566 788878884 678999999999995
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=94.25 E-value=0.0041 Score=52.24 Aligned_cols=54 Identities=22% Similarity=0.586 Sum_probs=37.2
Q ss_pred hhHHHHHHhhhccCccccccccccccc--CC-------CCCCHHHHHHhhhhcCCCCCCCCCCCCC
Q 044049 67 SNCCSGFESVIKSNFHCICEAIKSSSD--LG-------LDLNLTRAFTLSSDCAISAPPLKKCGVP 123 (139)
Q Consensus 67 ~~CC~alk~l~~~~~~CLC~~i~~~~~--~~-------~~in~~ra~~LP~~Cgv~~p~~~~C~~~ 123 (139)
.+||+.|+++- .+++|-|..|+.... .+ ...=..+|..||..||+..| ..|..+
T Consensus 429 ~~cc~~l~~~~-~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~--~~c~~~ 491 (500)
T 3ob4_A 429 ERCCNELNEFE-NNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP--QRCDLD 491 (500)
T ss_dssp HHHHHHHGGGT-TCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCC--SCCCCC
T ss_pred HHHHHHHHhCC-cccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCC--ccCCcc
Confidence 78999999982 127999999876432 00 01114559999999999854 368754
No 12
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=92.63 E-value=0.37 Score=32.92 Aligned_cols=73 Identities=21% Similarity=0.451 Sum_probs=50.8
Q ss_pred CCCCHhhhh--c-ccccHHHhhCCC----CC------CCCChhHHHHHHhhhccCccccccccccccc--CC---CCCCH
Q 044049 39 SGDCSEVIY--N-LSDCLDFLSKGS----NH------TKPGSNCCSGFESVIKSNFHCICEAIKSSSD--LG---LDLNL 100 (139)
Q Consensus 39 ~~~C~~~~~--~-L~pCl~yl~~~~----~~------~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~--~~---~~in~ 100 (139)
...|...+. + |.+|..|+.... +. ...-..||+.|+.+ +..|-|..|+.... +. ..-..
T Consensus 8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~ 84 (103)
T 1s6d_A 8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM 84 (103)
T ss_dssp SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHH
Confidence 466988863 4 899999997421 00 12358899999997 78999999976442 11 01234
Q ss_pred HHHHHhhhhcCCCC
Q 044049 101 TRAFTLSSDCAISA 114 (139)
Q Consensus 101 ~ra~~LP~~Cgv~~ 114 (139)
.+|..||..||+..
T Consensus 85 q~A~~LP~~C~i~p 98 (103)
T 1s6d_A 85 SMAHNLPIECNLMS 98 (103)
T ss_dssp HHHHHHHHHTTSSS
T ss_pred HHHHhcHHhcCCCc
Confidence 56788999999973
No 13
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=90.15 E-value=0.061 Score=37.04 Aligned_cols=75 Identities=19% Similarity=0.482 Sum_probs=47.1
Q ss_pred CHhhhhc---ccccHHHhhC----CCCCCC-------C--ChhHHHHHHhhhccCccccccccccccc-------CCC--
Q 044049 42 CSEVIYN---LSDCLDFLSK----GSNHTK-------P--GSNCCSGFESVIKSNFHCICEAIKSSSD-------LGL-- 96 (139)
Q Consensus 42 C~~~~~~---L~pCl~yl~~----~~~~~~-------P--s~~CC~alk~l~~~~~~CLC~~i~~~~~-------~~~-- 96 (139)
|...+.. |.+|..|+.. ++.... + -..||+.|+.+ +..|-|..|+.... ++-
T Consensus 5 C~~q~q~~q~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~ 81 (109)
T 1sm7_A 5 CQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQ 81 (109)
T ss_dssp HHTTHHHHCCCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTH
T ss_pred hHHHHHcCccHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHH
Confidence 4444443 8999999963 111012 1 36899999997 78999999876431 010
Q ss_pred -CCCHHHHHHhhhhcCCCCCCCCCCC
Q 044049 97 -DLNLTRAFTLSSDCAISAPPLKKCG 121 (139)
Q Consensus 97 -~in~~ra~~LP~~Cgv~~p~~~~C~ 121 (139)
.-...+|..||..||+..+ ..|.
T Consensus 82 ~~~~~~~a~~LP~~Cnl~~~--~~C~ 105 (109)
T 1sm7_A 82 STRIYQIAKNLPNVCNMKQI--GTCP 105 (109)
T ss_dssp HHHHHHTTSSHHHHSCCCSS--CSSC
T ss_pred HHHHHHHHHhCHHhcCCCCC--CCCC
Confidence 0123346679999999743 3464
No 14
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=88.93 E-value=0.27 Score=34.81 Aligned_cols=71 Identities=31% Similarity=0.585 Sum_probs=48.9
Q ss_pred CCCCHhhh--hcccccHHHhhCCC-CC-------CCC-----------ChhHHHHHHhhhccCccccccccccccc----
Q 044049 39 SGDCSEVI--YNLSDCLDFLSKGS-NH-------TKP-----------GSNCCSGFESVIKSNFHCICEAIKSSSD---- 93 (139)
Q Consensus 39 ~~~C~~~~--~~L~pCl~yl~~~~-~~-------~~P-----------s~~CC~alk~l~~~~~~CLC~~i~~~~~---- 93 (139)
...|...+ ..|.+|..|+.... .. ..| -..||+.|+.+ ++.|-|..|+....
T Consensus 15 ~q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~---~~~C~C~aL~~~v~~~~q 91 (125)
T 1psy_A 15 SQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQ 91 (125)
T ss_dssp SSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc---CcccccHHHHHHHHHHHH
Confidence 45798887 46999999997521 00 012 26799999987 89999999965441
Q ss_pred ---CC-CC--CCHHHHHHhhhhcCC
Q 044049 94 ---LG-LD--LNLTRAFTLSSDCAI 112 (139)
Q Consensus 94 ---~~-~~--in~~ra~~LP~~Cgv 112 (139)
+. -- =-..+|..||..||+
T Consensus 92 Qgq~~gqq~~~~~q~A~~LP~~C~i 116 (125)
T 1psy_A 92 QGQLHGEESERVAQRAGEIVSSCGV 116 (125)
T ss_dssp HTTCCTTCSHHHHHHHHHHHHHHTC
T ss_pred HhhhhHHHHHHHHHHHHhhHHHcCC
Confidence 11 11 124567789999999
No 15
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=85.24 E-value=0.88 Score=32.22 Aligned_cols=82 Identities=21% Similarity=0.520 Sum_probs=54.2
Q ss_pred CCCCCHhhh--hcccccHHHhhCCCCCC--------CC-------ChhHHHHHHhhhccCccccccccccccc---CCC-
Q 044049 38 PSGDCSEVI--YNLSDCLDFLSKGSNHT--------KP-------GSNCCSGFESVIKSNFHCICEAIKSSSD---LGL- 96 (139)
Q Consensus 38 ~~~~C~~~~--~~L~pCl~yl~~~~~~~--------~P-------s~~CC~alk~l~~~~~~CLC~~i~~~~~---~~~- 96 (139)
....|...+ ..|.+|..|+....... .- -..||+.|+.+. +++.|-|..|+.... ..+
T Consensus 12 ~~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~q~~ 90 (127)
T 1w2q_A 12 DSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQ 90 (127)
T ss_dssp TTCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCTTTT
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHhhhh
Confidence 356798876 46999999997421000 11 267999999963 368999999976541 111
Q ss_pred --CCC---HHHHHHhhhhcCCCCCCCCCCCC
Q 044049 97 --DLN---LTRAFTLSSDCAISAPPLKKCGV 122 (139)
Q Consensus 97 --~in---~~ra~~LP~~Cgv~~p~~~~C~~ 122 (139)
-.. ..+|..||..|++.-| ..|..
T Consensus 91 gqq~~~~~~q~A~~LP~~C~i~~~--~~C~~ 119 (127)
T 1w2q_A 91 DRQMVQQFKRELMSLPQQCNFRAP--QRCDL 119 (127)
T ss_dssp TSTTHHHHHHHHHHHHHHHTCCCS--SCCSC
T ss_pred hHHHHHHHHHHHHHhHHhcCCCCC--CcCCC
Confidence 122 4568889999999533 35764
No 16
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=84.32 E-value=0.29 Score=31.37 Aligned_cols=52 Identities=19% Similarity=0.437 Sum_probs=36.8
Q ss_pred ChhHHHHHHhhhccCccccccccccccc-----CC-C-----CCCHHHHHHhhhhcCCCCCCCCCCCC
Q 044049 66 GSNCCSGFESVIKSNFHCICEAIKSSSD-----LG-L-----DLNLTRAFTLSSDCAISAPPLKKCGV 122 (139)
Q Consensus 66 s~~CC~alk~l~~~~~~CLC~~i~~~~~-----~~-~-----~in~~ra~~LP~~Cgv~~p~~~~C~~ 122 (139)
-..||+.|+.+ +..|-|..|+.... -. . .=...+|..||..||+..+ ..|..
T Consensus 7 ~qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~--~~C~~ 69 (72)
T 2ds2_B 7 LRQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI--GACPF 69 (72)
T ss_dssp HHHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTC--CCCCC
T ss_pred HHHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCC--CcCCC
Confidence 36799999987 89999999876541 00 0 1245678889999999743 35653
No 17
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=82.10 E-value=0.15 Score=32.88 Aligned_cols=54 Identities=19% Similarity=0.399 Sum_probs=36.9
Q ss_pred CCChhHHHHHHhhhccCccccccccccccc-------CCC---CCCHHHHHHhhhhcCCCCCCCCCCCC
Q 044049 64 KPGSNCCSGFESVIKSNFHCICEAIKSSSD-------LGL---DLNLTRAFTLSSDCAISAPPLKKCGV 122 (139)
Q Consensus 64 ~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~-------~~~---~in~~ra~~LP~~Cgv~~p~~~~C~~ 122 (139)
..-..||+.|+.+ +..|-|..|+.... ++- .-...+|..||..||+..+ ..|..
T Consensus 9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~--~~C~~ 72 (75)
T 1pnb_B 9 WLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCPF 72 (75)
T ss_dssp SCTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT--CCCCC
T ss_pred HHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC--CCCCc
Confidence 4457899999997 78999999876431 111 1124556679999999743 35653
No 18
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=79.47 E-value=0.2 Score=34.84 Aligned_cols=77 Identities=25% Similarity=0.531 Sum_probs=48.6
Q ss_pred CCCHhhhh---cccccHHHhhC----CCCCCCCC-------hhHHHHHHhhhccCccccccccccccc-----CC-C-CC
Q 044049 40 GDCSEVIY---NLSDCLDFLSK----GSNHTKPG-------SNCCSGFESVIKSNFHCICEAIKSSSD-----LG-L-DL 98 (139)
Q Consensus 40 ~~C~~~~~---~L~pCl~yl~~----~~~~~~Ps-------~~CC~alk~l~~~~~~CLC~~i~~~~~-----~~-~-~i 98 (139)
..|...+. +|..|..|+.. ++...... ..||+.|+.+ +..|-|..|+.... .+ + +=
T Consensus 6 q~C~~q~q~~~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~~~qq~~~~~~~ 82 (114)
T 2lvf_A 6 EECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGE 82 (114)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHCCCCSH
T ss_pred HhhHHHHHHhHhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHHHHHHHhhhhhh
Confidence 34665532 58899999852 11111111 4599999998 88999998865432 01 1 10
Q ss_pred ----CHHHHHHhhhhcCCCCCCCCCCCC
Q 044049 99 ----NLTRAFTLSSDCAISAPPLKKCGV 122 (139)
Q Consensus 99 ----n~~ra~~LP~~Cgv~~p~~~~C~~ 122 (139)
-..+|..||..||+.. ..|..
T Consensus 83 ~~~~~~q~A~~LP~~C~i~p---~~C~f 107 (114)
T 2lvf_A 83 QMRRMMRLAENIPSRCNLSP---MRCPM 107 (114)
T ss_dssp HHHHHHHHHHHHHHHHCCCC---SCCTT
T ss_pred HHHHHHHHHHhChHhcCCCc---ccCCC
Confidence 1346888999999983 35843
No 19
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=67.13 E-value=2.8 Score=29.67 Aligned_cols=71 Identities=23% Similarity=0.457 Sum_probs=45.3
Q ss_pred cccccHHHhhCC----CCCCCC----ChhHHHHHHhhhccCccccccccccccc--C---------C-CCCC--------
Q 044049 48 NLSDCLDFLSKG----SNHTKP----GSNCCSGFESVIKSNFHCICEAIKSSSD--L---------G-LDLN-------- 99 (139)
Q Consensus 48 ~L~pCl~yl~~~----~~~~~P----s~~CC~alk~l~~~~~~CLC~~i~~~~~--~---------~-~~in-------- 99 (139)
.|..|..|+... +. ..| ...||+.|.++ +..|-|..|..-.. + + ++.-
T Consensus 16 pL~~CR~Yv~~q~C~~g~-~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~ 91 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGP-RLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQ 91 (127)
T ss_dssp CCHHHHHHHHHHHHSCCC-SSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHH
T ss_pred cchHHHHHHHHhhcccCC-CCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHH
Confidence 477899999521 11 122 35699999997 78999988854321 0 1 0111
Q ss_pred HHHHHHh--hhhcCCCCCCC-CCCCC
Q 044049 100 LTRAFTL--SSDCAISAPPL-KKCGV 122 (139)
Q Consensus 100 ~~ra~~L--P~~Cgv~~p~~-~~C~~ 122 (139)
...|..| |..||+..+.+ -.|..
T Consensus 92 ~~~A~~Lv~P~~Cnl~~~~g~~~C~~ 117 (127)
T 1bea_A 92 RGFAATLVTEAECNLATISGVAECPW 117 (127)
T ss_dssp HHHHTTTTSTTTTCCCCTTSSSCCTT
T ss_pred HHHHHhcCCcccCCCCCCCCCCCCCc
Confidence 3357779 99999988743 25754
No 20
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=65.65 E-value=1 Score=31.86 Aligned_cols=68 Identities=22% Similarity=0.419 Sum_probs=42.3
Q ss_pred cccccHHHhhCCCC-CCCC---ChhHHHHHHhhhccCccccccccccccc-----CCC-------C--------CCHHHH
Q 044049 48 NLSDCLDFLSKGSN-HTKP---GSNCCSGFESVIKSNFHCICEAIKSSSD-----LGL-------D--------LNLTRA 103 (139)
Q Consensus 48 ~L~pCl~yl~~~~~-~~~P---s~~CC~alk~l~~~~~~CLC~~i~~~~~-----~~~-------~--------in~~ra 103 (139)
.|..|..|+...-. ...| -..||+.|+++ +..|-|..|..-.. .+. . +-...|
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A 92 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA 92 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence 46678888852100 1112 46799999997 78999998865331 110 0 111257
Q ss_pred HHhhhhcCCCCC-CCC
Q 044049 104 FTLSSDCAISAP-PLK 118 (139)
Q Consensus 104 ~~LP~~Cgv~~p-~~~ 118 (139)
..||..||+..+ .+.
T Consensus 93 ~~LP~~Cnl~~~~~g~ 108 (124)
T 1hss_A 93 ASITAVCRLPIVVDAS 108 (124)
T ss_dssp TTHHHHTTCCEECSTT
T ss_pred HhchhhcCCCCCCCCC
Confidence 779999999887 444
No 21
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=64.28 E-value=1.6 Score=30.75 Aligned_cols=67 Identities=24% Similarity=0.422 Sum_probs=42.8
Q ss_pred cccccHHHhhCC---CCCCCC----ChhHHHHHHhhhccCccccccccccccc--C-------C--CCCC--------HH
Q 044049 48 NLSDCLDFLSKG---SNHTKP----GSNCCSGFESVIKSNFHCICEAIKSSSD--L-------G--LDLN--------LT 101 (139)
Q Consensus 48 ~L~pCl~yl~~~---~~~~~P----s~~CC~alk~l~~~~~~CLC~~i~~~~~--~-------~--~~in--------~~ 101 (139)
.|..|..|+... .....| -..||+.|+++ +..|-|..|..-.. + + +..- ..
T Consensus 16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~ 92 (122)
T 1b1u_A 16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRA 92 (122)
T ss_dssp TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHH
T ss_pred cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHH
Confidence 477899999532 001123 35699999997 78999988865331 0 0 0111 13
Q ss_pred HHHHh--hhhcCCCCCCC
Q 044049 102 RAFTL--SSDCAISAPPL 117 (139)
Q Consensus 102 ra~~L--P~~Cgv~~p~~ 117 (139)
.|..| |..||+..+.+
T Consensus 93 ~A~~Lv~P~~Cnl~~~~g 110 (122)
T 1b1u_A 93 FAPKLVTEVECNLATIHG 110 (122)
T ss_dssp HGGGTTSTTTTCCCCTTS
T ss_pred HHHhcCCcccCCCCCCCC
Confidence 46779 99999988653
No 22
>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} SCOP: d.108.1.7
Probab=23.88 E-value=35 Score=23.95 Aligned_cols=15 Identities=33% Similarity=0.693 Sum_probs=12.2
Q ss_pred CCCCCCCCceeeecC
Q 044049 125 PPAPPSPGTYDMIYN 139 (139)
Q Consensus 125 p~~~~~p~~~~~~~~ 139 (139)
|..+++|+.|.|.|+
T Consensus 110 p~~P~~~d~~~M~Y~ 124 (126)
T 1zo0_A 110 PLVPKRPDACFMVYT 124 (126)
T ss_dssp SSCSSCSCCEEEEEC
T ss_pred CCCCCCCCeEEEEEe
Confidence 345689999999996
No 23
>2cvc_A Cytochrome CC3, high-molecular-weight cytochrome C precursor; electron transport; HET: HEM; 2.00A {Desulfovibrio vulgaris} SCOP: a.138.1.1 PDB: 1gws_A* 1h29_A*
Probab=22.08 E-value=19 Score=30.69 Aligned_cols=17 Identities=29% Similarity=0.216 Sum_probs=0.0
Q ss_pred ChhhhHHHHHHHHHHHH
Q 044049 1 MEKTARVLFIACILVAW 17 (139)
Q Consensus 1 m~~~~~~~~~~~~~vv~ 17 (139)
|++.+|.+.++++++|+
T Consensus 1 m~~~kr~~~~~~~~~~l 17 (545)
T 2cvc_A 1 MRNGRTLLRWAGVLAAT 17 (545)
T ss_dssp -----------------
T ss_pred CCccchhHHHHHHHHHH
Confidence 88777776555444444
No 24
>3ucp_A UNDA; beta-barrel, C-type cytochrome, electron transport, C-type H cell surface, transport protein; HET: HEC; 1.76A {Shewanella SP} PDB: 3ufh_A* 3ufk_A*
Probab=21.84 E-value=19 Score=30.49 Aligned_cols=23 Identities=17% Similarity=0.156 Sum_probs=0.0
Q ss_pred ChhhhHHHHHHHHHHHHHHHhhh
Q 044049 1 MEKTARVLFIACILVAWGGGAVT 23 (139)
Q Consensus 1 m~~~~~~~~~~~~~vv~~~~~~~ 23 (139)
|+|+++++|++..+++|++...+
T Consensus 1 ~~~~~~~~~~~a~~~~~~~~~~~ 23 (874)
T 3ucp_A 1 MSKKLLSVLFGASLAALALSPTA 23 (874)
T ss_dssp -----------------------
T ss_pred CchhHHHHHHHHHHHHHHHHHHh
Confidence 89999998888888888665543
Done!