Query 044053
Match_columns 327
No_of_seqs 253 out of 1487
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 19:11:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h7u_A Aldo-keto reductase; st 100.0 9E-72 3.1E-76 518.6 32.7 314 6-327 19-333 (335)
2 3h7r_A Aldo-keto reductase; st 100.0 1.8E-71 6.2E-76 515.6 28.9 311 5-327 18-329 (331)
3 1zgd_A Chalcone reductase; pol 100.0 1.4E-70 4.7E-75 506.4 30.6 306 11-327 5-312 (312)
4 3ln3_A Dihydrodiol dehydrogena 100.0 1.9E-68 6.6E-73 494.8 35.5 305 10-319 4-321 (324)
5 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 1.8E-67 6E-72 487.9 33.7 305 10-319 3-320 (323)
6 3buv_A 3-OXO-5-beta-steroid 4- 100.0 1.3E-66 4.3E-71 482.8 34.8 300 11-315 6-317 (326)
7 1qwk_A Aldose reductase, aldo- 100.0 7.2E-67 2.5E-71 482.6 32.4 295 12-320 5-314 (317)
8 1s1p_A Aldo-keto reductase fam 100.0 1.3E-66 4.3E-71 483.6 33.7 305 10-319 3-320 (331)
9 4gie_A Prostaglandin F synthas 100.0 1.1E-66 3.8E-71 475.4 32.1 269 8-306 9-277 (290)
10 2wzm_A Aldo-keto reductase; ox 100.0 5.2E-67 1.8E-71 475.6 29.5 273 1-306 1-273 (283)
11 3f7j_A YVGN protein; aldo-keto 100.0 1.7E-66 5.9E-71 470.9 32.1 263 11-306 5-267 (276)
12 2bgs_A Aldose reductase; holoe 100.0 1.5E-66 5E-71 484.3 31.0 305 8-326 32-341 (344)
13 3up8_A Putative 2,5-diketo-D-g 100.0 1.9E-66 6.6E-71 474.5 30.7 265 8-306 20-286 (298)
14 1us0_A Aldose reductase; oxido 100.0 8.3E-66 2.8E-70 475.4 34.8 301 12-319 2-313 (316)
15 3o3r_A Aldo-keto reductase fam 100.0 8.7E-66 3E-70 475.3 34.7 301 12-319 2-313 (316)
16 3o0k_A Aldo/keto reductase; ss 100.0 9.5E-67 3.3E-71 473.7 27.7 262 7-300 21-282 (283)
17 3b3e_A YVGN protein; aldo-keto 100.0 4E-66 1.4E-70 474.9 31.1 263 11-306 39-301 (310)
18 1mi3_A Xylose reductase, XR; a 100.0 4E-66 1.4E-70 478.8 31.2 293 10-309 3-312 (322)
19 1hw6_A 2,5-diketo-D-gluconic a 100.0 2.4E-66 8.1E-71 470.5 28.9 265 10-304 1-265 (278)
20 1vbj_A Prostaglandin F synthas 100.0 5E-66 1.7E-70 468.7 29.5 265 9-306 6-270 (281)
21 4f40_A Prostaglandin F2-alpha 100.0 2.2E-65 7.6E-70 466.5 30.0 271 11-306 9-279 (288)
22 1mzr_A 2,5-diketo-D-gluconate 100.0 9.1E-65 3.1E-69 463.0 30.3 266 9-306 22-287 (296)
23 4gac_A Alcohol dehydrogenase [ 100.0 1.4E-64 4.7E-69 469.1 32.0 290 12-307 2-298 (324)
24 3eau_A Voltage-gated potassium 100.0 9.4E-65 3.2E-69 470.8 28.6 273 10-306 1-326 (327)
25 3b3d_A YTBE protein, putative 100.0 2.7E-64 9.1E-69 464.4 30.2 266 12-307 40-306 (314)
26 3v0s_A Perakine reductase; AKR 100.0 2E-65 6.9E-70 476.8 22.6 274 12-313 1-321 (337)
27 1vp5_A 2,5-diketo-D-gluconic a 100.0 4.7E-64 1.6E-68 458.7 30.6 264 13-304 15-278 (298)
28 3krb_A Aldose reductase; ssgci 100.0 2.1E-64 7.2E-69 469.1 28.4 289 9-304 9-317 (334)
29 3lut_A Voltage-gated potassium 100.0 1.3E-64 4.4E-69 476.6 27.1 278 10-312 36-366 (367)
30 1ur3_M Hypothetical oxidoreduc 100.0 9.3E-65 3.2E-69 468.5 24.4 271 12-306 23-318 (319)
31 3n2t_A Putative oxidoreductase 100.0 1.3E-64 4.5E-69 473.1 25.3 277 9-314 16-344 (348)
32 1pz1_A GSP69, general stress p 100.0 1.1E-64 3.9E-69 471.0 24.3 273 12-311 1-322 (333)
33 1pyf_A IOLS protein; beta-alph 100.0 1.7E-64 5.7E-69 466.1 24.7 263 12-302 1-310 (312)
34 3erp_A Putative oxidoreductase 100.0 1.7E-63 5.7E-68 466.5 27.6 272 7-301 29-349 (353)
35 3n6q_A YGHZ aldo-keto reductas 100.0 5.4E-63 1.8E-67 462.2 29.5 275 6-303 7-334 (346)
36 1lqa_A TAS protein; TIM barrel 100.0 3.8E-63 1.3E-67 463.4 26.9 282 12-303 1-340 (346)
37 1ynp_A Oxidoreductase, AKR11C1 100.0 2.4E-63 8.1E-68 458.9 24.6 267 9-306 18-312 (317)
38 4exb_A Putative uncharacterize 100.0 1.3E-61 4.4E-66 442.0 20.9 240 9-292 27-292 (292)
39 1gve_A Aflatoxin B1 aldehyde r 100.0 1.7E-60 6E-65 442.0 21.5 262 25-308 4-322 (327)
40 2bp1_A Aflatoxin B1 aldehyde r 100.0 4.3E-60 1.5E-64 444.3 21.3 266 17-306 31-353 (360)
41 3cf4_A Acetyl-COA decarboxylas 98.1 1.4E-06 4.9E-11 88.5 3.9 131 109-278 231-384 (807)
42 3gd6_A Muconate cycloisomerase 82.7 27 0.00093 31.9 14.0 153 39-226 142-300 (391)
43 2og9_A Mandelate racemase/muco 82.4 29 0.001 31.7 14.1 146 39-221 162-315 (393)
44 2pp0_A L-talarate/galactarate 79.5 19 0.00065 33.0 11.7 146 39-221 175-328 (398)
45 3q45_A Mandelate racemase/muco 79.1 35 0.0012 30.8 13.3 151 39-225 140-296 (368)
46 2qde_A Mandelate racemase/muco 77.4 43 0.0015 30.6 14.0 151 39-226 145-302 (397)
47 2poz_A Putative dehydratase; o 76.2 31 0.0011 31.4 12.1 151 38-224 136-310 (392)
48 2ox4_A Putative mandelate race 75.8 41 0.0014 30.7 12.9 150 39-224 146-320 (403)
49 1r0m_A N-acylamino acid racema 73.7 51 0.0018 29.7 13.7 147 39-224 148-299 (375)
50 2hxt_A L-fuconate dehydratase; 73.7 42 0.0014 31.2 12.5 145 38-220 197-350 (441)
51 3mwc_A Mandelate racemase/muco 72.8 58 0.002 29.8 14.2 148 40-225 164-316 (400)
52 2rdx_A Mandelate racemase/muco 72.6 52 0.0018 29.7 12.6 150 39-225 145-298 (379)
53 4djd_D C/Fe-SP, corrinoid/iron 72.4 32 0.0011 30.8 10.6 101 105-224 82-189 (323)
54 2qq6_A Mandelate racemase/muco 72.3 52 0.0018 30.1 12.7 149 39-224 149-321 (410)
55 2ovl_A Putative racemase; stru 71.1 59 0.002 29.3 15.2 146 39-221 146-299 (371)
56 2zc8_A N-acylamino acid racema 70.9 59 0.002 29.2 12.8 147 39-224 141-292 (369)
57 1nu5_A Chloromuconate cycloiso 69.6 63 0.0022 29.0 15.0 151 39-225 142-300 (370)
58 1ydn_A Hydroxymethylglutaryl-C 68.4 16 0.00053 32.1 7.8 101 104-222 26-140 (295)
59 2gl5_A Putative dehydratase pr 67.2 75 0.0026 29.0 15.6 149 39-223 150-328 (410)
60 2nql_A AGR_PAT_674P, isomerase 66.9 74 0.0025 28.8 14.4 150 39-225 164-319 (388)
61 2p8b_A Mandelate racemase/muco 64.4 80 0.0027 28.3 15.0 150 39-225 141-298 (369)
62 1mdl_A Mandelate racemase; iso 64.0 80 0.0027 28.1 16.9 146 39-221 144-297 (359)
63 1uwk_A Urocanate hydratase; hy 63.0 20 0.0007 33.8 7.5 127 46-200 117-269 (557)
64 3i6e_A Muconate cycloisomerase 62.7 90 0.0031 28.3 15.7 150 39-225 148-304 (385)
65 4dwd_A Mandelate racemase/muco 62.1 84 0.0029 28.6 11.7 148 39-223 139-300 (393)
66 3stp_A Galactonate dehydratase 62.0 58 0.002 30.0 10.7 149 38-222 178-339 (412)
67 3rr1_A GALD, putative D-galact 61.5 98 0.0034 28.3 15.2 150 38-223 124-288 (405)
68 3eez_A Putative mandelate race 61.4 75 0.0026 28.7 11.2 152 38-226 144-299 (378)
69 3v7e_A Ribosome-associated pro 60.9 11 0.00036 26.3 4.2 58 158-222 3-60 (82)
70 2pgw_A Muconate cycloisomerase 60.2 98 0.0034 27.9 14.9 150 39-224 147-301 (384)
71 2q5c_A NTRC family transcripti 60.2 32 0.0011 28.1 7.7 66 150-220 79-147 (196)
72 1tkk_A Similar to chloromucona 59.6 97 0.0033 27.7 13.9 152 39-225 140-299 (366)
73 2o56_A Putative mandelate race 59.6 1E+02 0.0035 28.0 17.4 149 39-224 152-326 (407)
74 1x87_A Urocanase protein; stru 59.4 20 0.0007 33.8 6.8 128 47-200 113-264 (551)
75 3ro6_B Putative chloromuconate 58.8 77 0.0026 28.4 10.7 151 39-225 140-297 (356)
76 2fkn_A Urocanate hydratase; ro 57.8 20 0.00069 33.8 6.5 127 46-200 113-265 (552)
77 2qgy_A Enolase from the enviro 57.1 1.1E+02 0.0038 27.6 16.7 149 38-223 148-304 (391)
78 3dg3_A Muconate cycloisomerase 55.8 1.1E+02 0.0039 27.3 13.6 152 39-226 139-297 (367)
79 3ozy_A Putative mandelate race 55.8 1.2E+02 0.0041 27.5 15.4 149 38-222 150-305 (389)
80 3j21_Z 50S ribosomal protein L 55.0 52 0.0018 23.5 7.3 61 154-221 3-63 (99)
81 3i4k_A Muconate lactonizing en 54.9 1.2E+02 0.0042 27.3 16.5 152 39-226 148-307 (383)
82 1nvm_A HOA, 4-hydroxy-2-oxoval 54.6 45 0.0015 29.9 8.4 104 105-221 31-139 (345)
83 3r0u_A Enzyme of enolase super 54.4 1.2E+02 0.0043 27.3 16.2 153 39-226 142-301 (379)
84 2hzg_A Mandelate racemase/muco 54.1 1.3E+02 0.0044 27.3 14.7 146 39-221 145-304 (401)
85 4e5t_A Mandelate racemase / mu 54.0 1.3E+02 0.0045 27.4 12.7 148 39-222 151-317 (404)
86 2oz8_A MLL7089 protein; struct 53.8 1.3E+02 0.0044 27.2 15.1 149 39-221 145-296 (389)
87 3vtf_A UDP-glucose 6-dehydroge 53.7 10 0.00034 35.6 3.9 56 68-135 125-180 (444)
88 3my9_A Muconate cycloisomerase 53.4 1.3E+02 0.0043 27.1 12.2 151 39-225 146-303 (377)
89 1sjd_A N-acylamino acid racema 53.0 1.3E+02 0.0043 26.9 15.1 148 39-224 141-293 (368)
90 2ftp_A Hydroxymethylglutaryl-C 52.7 54 0.0018 28.7 8.4 101 103-221 29-143 (302)
91 3pdi_B Nitrogenase MOFE cofact 51.2 1.3E+02 0.0044 28.0 11.2 110 63-192 73-200 (458)
92 4a35_A Mitochondrial enolase s 51.2 1.5E+02 0.0052 27.4 13.8 148 38-221 200-356 (441)
93 2pju_A Propionate catabolism o 50.6 37 0.0013 28.5 6.6 68 150-220 91-159 (225)
94 2h9a_B CO dehydrogenase/acetyl 50.1 1.3E+02 0.0046 26.4 11.7 98 105-223 76-181 (310)
95 3qy7_A Tyrosine-protein phosph 50.0 1.2E+02 0.0041 25.8 11.6 184 39-256 18-223 (262)
96 3ddm_A Putative mandelate race 48.6 1.1E+02 0.0039 27.7 10.2 148 40-222 156-309 (392)
97 2xvc_A ESCRT-III, SSO0910; cel 48.3 14 0.00048 23.9 2.7 20 149-168 37-56 (59)
98 3bjs_A Mandelate racemase/muco 48.0 1.7E+02 0.0057 26.9 13.5 146 39-221 184-338 (428)
99 3l8a_A METC, putative aminotra 46.3 1.6E+02 0.0056 26.3 13.7 145 39-225 75-237 (421)
100 2ps2_A Putative mandelate race 46.2 1.3E+02 0.0043 27.0 10.1 151 39-226 146-301 (371)
101 2zad_A Muconate cycloisomerase 46.1 1.6E+02 0.0054 26.0 15.6 151 39-225 139-295 (345)
102 3fv9_G Mandelate racemase/muco 45.3 1.7E+02 0.006 26.3 11.5 153 38-226 144-305 (386)
103 1wue_A Mandelate racemase/muco 45.1 1.7E+02 0.0059 26.3 10.9 148 39-226 161-314 (386)
104 2lbw_A H/ACA ribonucleoprotein 44.7 78 0.0027 23.6 7.0 64 152-221 6-69 (121)
105 3jva_A Dipeptide epimerase; en 44.5 1.7E+02 0.0058 26.0 16.0 150 39-224 139-294 (354)
106 3tji_A Mandelate racemase/muco 44.5 1.8E+02 0.006 26.7 10.9 151 38-224 153-333 (422)
107 2gdq_A YITF; mandelate racemas 44.1 1.8E+02 0.0061 26.1 12.4 145 41-221 141-293 (382)
108 3cpq_A 50S ribosomal protein L 43.9 58 0.002 23.8 6.1 63 152-221 7-69 (110)
109 3v7q_A Probable ribosomal prot 43.9 86 0.003 22.4 7.0 62 153-221 6-67 (101)
110 3szu_A ISPH, 4-hydroxy-3-methy 43.5 23 0.00079 31.7 4.3 107 165-282 171-290 (328)
111 4djd_C C/Fe-SP, corrinoid/iron 42.8 1.3E+02 0.0045 28.0 9.5 82 120-223 127-209 (446)
112 1wuf_A Hypothetical protein LI 42.1 2E+02 0.0067 26.0 13.4 148 39-226 161-314 (393)
113 1wv2_A Thiazole moeity, thiazo 42.0 1.7E+02 0.0057 25.2 11.4 141 14-186 10-155 (265)
114 3r4e_A Mandelate racemase/muco 41.6 2.1E+02 0.0071 26.2 12.1 151 38-224 142-331 (418)
115 2r14_A Morphinone reductase; H 41.5 2E+02 0.0068 26.0 11.3 66 107-190 258-323 (377)
116 3iz5_f 60S ribosomal protein L 41.4 51 0.0017 24.4 5.4 64 151-221 11-74 (112)
117 3iix_A Biotin synthetase, puta 41.3 1E+02 0.0035 27.1 8.5 120 149-283 84-215 (348)
118 1ydo_A HMG-COA lyase; TIM-barr 41.2 96 0.0033 27.2 8.1 101 103-221 27-141 (307)
119 3qld_A Mandelate racemase/muco 41.2 2E+02 0.0069 25.9 16.4 148 39-225 149-301 (388)
120 2ale_A SNU13, NHP2/L7AE family 39.5 85 0.0029 24.0 6.6 64 152-221 18-81 (134)
121 3fcp_A L-Ala-D/L-Glu epimerase 39.3 2.1E+02 0.0073 25.6 11.5 152 39-226 147-306 (381)
122 3ugv_A Enolase; enzyme functio 39.1 1.5E+02 0.0052 26.8 9.4 146 39-220 171-326 (390)
123 2yci_X 5-methyltetrahydrofolat 38.9 1.9E+02 0.0064 24.9 11.7 99 102-223 33-133 (271)
124 3sjn_A Mandelate racemase/muco 38.7 2.2E+02 0.0074 25.5 12.8 147 41-223 148-304 (374)
125 3sbf_A Mandelate racemase / mu 38.7 2.2E+02 0.0077 25.7 12.6 151 38-224 132-312 (401)
126 4ggi_A UDP-2,3-diacylglucosami 38.5 36 0.0012 29.7 4.8 20 103-122 108-127 (283)
127 1tzz_A Hypothetical protein L1 38.4 2.2E+02 0.0076 25.6 14.6 148 39-221 165-325 (392)
128 1t57_A Conserved protein MTH16 37.8 1.7E+02 0.0058 24.1 8.4 71 151-224 36-114 (206)
129 3o85_A Ribosomal protein L7AE; 37.7 1E+02 0.0034 23.1 6.7 64 151-220 16-79 (122)
130 1w41_A 50S ribosomal protein L 37.4 80 0.0028 22.5 5.9 61 154-221 4-64 (101)
131 1vq8_F 50S ribosomal protein L 37.2 1E+02 0.0035 22.8 6.7 62 152-219 15-76 (120)
132 3k13_A 5-methyltetrahydrofolat 37.1 1.5E+02 0.0052 25.9 8.7 101 102-223 36-141 (300)
133 1v77_A PH1877P, hypothetical p 35.8 1.8E+02 0.0061 23.7 10.4 90 157-256 88-195 (212)
134 3rfa_A Ribosomal RNA large sub 34.7 2.5E+02 0.0085 25.7 10.1 78 149-226 252-349 (404)
135 3mkc_A Racemase; metabolic pro 34.4 2.6E+02 0.0089 25.2 12.7 145 42-222 160-315 (394)
136 1rvk_A Isomerase/lactonizing e 34.4 2.5E+02 0.0086 25.0 15.2 146 39-221 149-309 (382)
137 3toy_A Mandelate racemase/muco 34.3 2.6E+02 0.0089 25.2 14.2 146 39-220 167-320 (383)
138 1tx2_A DHPS, dihydropteroate s 33.7 2.3E+02 0.0078 24.7 9.3 64 154-223 103-167 (297)
139 2aif_A Ribosomal protein L7A; 32.4 1.1E+02 0.0037 23.3 6.2 65 151-221 26-90 (135)
140 2fc3_A 50S ribosomal protein L 32.4 1E+02 0.0035 23.0 5.9 63 152-220 14-76 (124)
141 3dgb_A Muconate cycloisomerase 31.9 2.8E+02 0.0096 24.9 11.7 152 39-226 148-307 (382)
142 1vpq_A Hypothetical protein TM 31.8 1.9E+02 0.0066 24.8 8.4 69 54-131 49-130 (273)
143 3t6c_A RSPA, putative MAND fam 31.8 3.1E+02 0.011 25.3 13.4 67 155-223 280-350 (440)
144 1wa3_A 2-keto-3-deoxy-6-phosph 31.7 1E+02 0.0035 24.8 6.4 56 158-220 52-109 (205)
145 3ewb_X 2-isopropylmalate synth 31.4 2.6E+02 0.0088 24.2 10.2 95 105-221 28-140 (293)
146 2cw6_A Hydroxymethylglutaryl-C 31.3 1.2E+02 0.004 26.4 7.1 103 100-221 24-140 (298)
147 1eye_A DHPS 1, dihydropteroate 30.9 2.6E+02 0.0089 24.1 11.2 104 102-223 28-132 (280)
148 3rjz_A N-type ATP pyrophosphat 30.9 1.8E+02 0.0061 24.5 7.8 146 156-315 19-196 (237)
149 3vnd_A TSA, tryptophan synthas 30.2 2.4E+02 0.0083 24.1 8.7 94 148-251 28-149 (267)
150 3ks6_A Glycerophosphoryl diest 30.1 1.7E+02 0.0057 24.5 7.7 30 158-187 123-152 (250)
151 2ph5_A Homospermidine synthase 30.1 25 0.00087 33.2 2.5 22 41-62 94-115 (480)
152 3fvs_A Kynurenine--oxoglutarat 29.5 2.9E+02 0.01 24.3 10.9 50 175-225 162-217 (422)
153 4h62_V Mediator of RNA polymer 29.5 24 0.00081 18.9 1.3 18 170-187 4-21 (31)
154 4h1z_A Enolase Q92ZS5; dehydra 29.4 3.2E+02 0.011 24.8 14.4 151 39-226 188-344 (412)
155 2ozt_A TLR1174 protein; struct 29.3 2.9E+02 0.0099 24.2 15.2 154 39-225 116-275 (332)
156 2xzm_U Ribosomal protein L7AE 29.3 1.8E+02 0.0062 21.8 7.5 62 154-221 8-73 (126)
157 3tha_A Tryptophan synthase alp 29.2 1.9E+02 0.0064 24.7 7.7 92 150-251 26-142 (252)
158 1rlg_A 50S ribosomal protein L 29.2 1.1E+02 0.0036 22.7 5.5 63 151-219 12-74 (119)
159 3ff4_A Uncharacterized protein 29.2 1.3E+02 0.0046 22.3 6.1 17 204-220 94-110 (122)
160 4a18_G RPL30; ribosome, eukary 28.8 1.6E+02 0.0055 21.1 6.3 64 151-221 7-70 (104)
161 3p6l_A Sugar phosphate isomera 28.7 1.8E+02 0.0062 24.0 7.7 85 155-251 25-129 (262)
162 3b46_A Aminotransferase BNA3; 28.4 2.7E+02 0.0093 25.1 9.4 21 205-225 224-244 (447)
163 4dye_A Isomerase; enolase fami 28.4 3.3E+02 0.011 24.6 12.7 144 40-222 169-319 (398)
164 3no3_A Glycerophosphodiester p 28.3 98 0.0033 25.8 5.8 66 157-222 120-203 (238)
165 3rcy_A Mandelate racemase/muco 27.6 3.6E+02 0.012 24.7 13.4 149 39-223 146-313 (433)
166 3l5l_A Xenobiotic reductase A; 27.4 3.3E+02 0.011 24.2 11.8 34 157-190 286-320 (363)
167 3u7q_A Nitrogenase molybdenum- 26.9 2.4E+02 0.0082 26.5 8.8 143 64-225 125-301 (492)
168 1r30_A Biotin synthase; SAM ra 26.7 2.7E+02 0.0091 24.7 8.8 120 148-283 98-230 (369)
169 3u5e_c L32, RP73, YL38, 60S ri 26.7 1.3E+02 0.0045 21.6 5.5 64 151-221 7-70 (105)
170 4e4u_A Mandalate racemase/muco 26.6 3.6E+02 0.012 24.4 15.7 148 39-222 144-310 (412)
171 3u9i_A Mandelate racemase/muco 26.5 1.7E+02 0.0059 26.5 7.5 69 156-226 260-331 (393)
172 3ik4_A Mandelate racemase/muco 26.3 3.5E+02 0.012 24.1 15.3 153 39-226 143-301 (365)
173 3dzz_A Putative pyridoxal 5'-p 24.5 3.4E+02 0.012 23.4 14.6 155 28-225 31-203 (391)
174 3ju3_A Probable 2-oxoacid ferr 24.4 2.1E+02 0.0072 20.9 7.4 54 15-75 7-63 (118)
175 4had_A Probable oxidoreductase 24.4 3.5E+02 0.012 23.4 9.6 99 158-265 40-162 (350)
176 3t7v_A Methylornithine synthas 24.3 3.6E+02 0.012 23.5 10.1 120 149-283 91-224 (350)
177 2chr_A Chloromuconate cycloiso 24.0 3.8E+02 0.013 23.7 13.3 152 39-226 143-301 (370)
178 2akz_A Gamma enolase, neural; 23.9 4.3E+02 0.015 24.3 11.6 93 101-220 271-368 (439)
179 3dxi_A Putative aldolase; TIM 23.6 3.4E+02 0.012 23.8 8.7 104 103-221 23-133 (320)
180 3dnf_A ISPH, LYTB, 4-hydroxy-3 23.5 26 0.0009 30.9 1.2 107 164-282 156-274 (297)
181 3on1_A BH2414 protein; structu 23.5 2E+02 0.0068 20.3 7.0 62 153-221 5-66 (101)
182 1q7z_A 5-methyltetrahydrofolat 23.3 4.9E+02 0.017 24.8 10.4 88 115-224 351-440 (566)
183 3lmz_A Putative sugar isomeras 23.3 1.9E+02 0.0065 23.8 6.8 98 105-225 32-135 (257)
184 1ps9_A 2,4-dienoyl-COA reducta 23.1 4.7E+02 0.016 25.3 10.5 36 87-123 207-247 (671)
185 1z41_A YQJM, probable NADH-dep 22.7 3.9E+02 0.013 23.4 13.1 88 88-190 209-302 (338)
186 3ihk_A Thiamin pyrophosphokina 22.7 2.3E+02 0.0077 23.4 6.9 58 205-286 51-113 (218)
187 3epo_A Thiamine biosynthesis p 22.6 5.2E+02 0.018 24.8 13.8 187 38-283 227-428 (612)
188 3p3b_A Mandelate racemase/muco 22.5 4.2E+02 0.014 23.7 12.1 65 155-221 240-311 (392)
189 3eeg_A 2-isopropylmalate synth 22.2 4E+02 0.014 23.3 11.8 99 105-225 29-145 (325)
190 3ch0_A Glycerophosphodiester p 21.9 2.3E+02 0.0078 23.8 7.1 20 40-59 22-41 (272)
191 4h3d_A 3-dehydroquinate dehydr 21.8 3.6E+02 0.012 22.7 18.6 131 11-175 9-147 (258)
192 4e8g_A Enolase, mandelate race 21.7 4.4E+02 0.015 23.7 15.0 150 39-226 164-320 (391)
193 2ztj_A Homocitrate synthase; ( 21.7 4.4E+02 0.015 23.6 9.5 93 105-220 26-134 (382)
194 1aj0_A DHPS, dihydropteroate s 21.6 3.9E+02 0.013 23.0 10.7 66 151-223 75-141 (282)
195 1s5l_U Photosystem II 12 kDa e 21.5 30 0.001 26.6 1.1 37 288-325 56-92 (134)
196 2dqw_A Dihydropteroate synthas 21.5 3.8E+02 0.013 23.3 8.4 66 151-223 89-154 (294)
197 3tj4_A Mandelate racemase; eno 21.5 4.3E+02 0.015 23.5 16.0 149 38-222 150-306 (372)
198 3p6l_A Sugar phosphate isomera 21.3 2.2E+02 0.0074 23.5 6.7 33 28-62 11-43 (262)
199 2qgq_A Protein TM_1862; alpha- 21.2 3.9E+02 0.013 22.9 12.9 121 149-284 33-179 (304)
200 3mz2_A Glycerophosphoryl diest 21.1 2.8E+02 0.0097 23.8 7.6 107 158-284 148-277 (292)
201 1kko_A 3-methylaspartate ammon 20.9 4.7E+02 0.016 23.7 10.8 71 152-224 282-361 (413)
202 1g0y_I Antagonist peptide AF10 20.9 21 0.00072 18.3 0.0 6 317-323 3-8 (26)
203 3aek_B Light-independent proto 20.8 2.1E+02 0.007 27.2 7.1 135 66-225 69-238 (525)
204 2kqv_A Non-structural protein 20.5 3.3E+02 0.011 21.8 7.9 126 156-309 13-150 (198)
205 2vef_A Dihydropteroate synthas 20.4 2.9E+02 0.0099 24.2 7.5 67 151-222 70-136 (314)
206 2h9a_A Carbon monoxide dehydro 20.4 4.5E+02 0.015 24.3 9.1 67 151-223 140-208 (445)
207 3c01_E Surface presentation of 20.2 61 0.0021 23.4 2.4 49 205-263 30-80 (98)
208 1mio_A Nitrogenase molybdenum 20.2 5.6E+02 0.019 24.2 10.8 143 64-225 116-287 (533)
No 1
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=9e-72 Score=518.65 Aligned_cols=314 Identities=43% Similarity=0.758 Sum_probs=276.7
Q ss_pred cccccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCC
Q 044053 6 QSTVFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSS 85 (327)
Q Consensus 6 ~~~~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~ 85 (327)
+++.+.|+|++|+ | | ++||+||||||+ .+.+++.++|+.|+++|||+||||+.||||+.+|++|++.++.|.. +
T Consensus 19 ~~~~~~m~~~~L~-t-g-~~v~~lglGt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~-~ 92 (335)
T 3h7u_A 19 SHMANAITFFKLN-T-G-AKFPSVGLGTWQ--ASPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVV-K 92 (335)
T ss_dssp -----CCCEEECT-T-S-CEEESBCEECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSC-C
T ss_pred hhhccCCceEEcC-C-C-CEecceeEeCCc--CCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHHHHhcCCC-C
Confidence 3466789999998 4 9 999999999998 5678899999999999999999999999999999999987766643 7
Q ss_pred CCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 044053 86 REQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLG 165 (327)
Q Consensus 86 R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G 165 (327)
|+++||+||+|..+.+++.+++++++||+|||+||||+|++|||+...++. .++ ..+.......+++|++|++|+++|
T Consensus 93 R~~v~I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~-~~~-~~~~~~~~~~~e~~~aL~~l~~~G 170 (335)
T 3h7u_A 93 REDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGS-VGI-KPENLLPVDIPSTWKAMEALYDSG 170 (335)
T ss_dssp GGGCEEEEEECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSC-SSC-CGGGEECCCHHHHHHHHHHHHHTT
T ss_pred cceeEEEeeeCCCCCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCcccccc-ccc-cccccccCCHHHHHHHHHHHHHcC
Confidence 999999999998888899999999999999999999999999997654321 111 111112346899999999999999
Q ss_pred CccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHH
Q 044053 166 LTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEI 245 (327)
Q Consensus 166 kir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~i 245 (327)
|||+||||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||+++|..++....+..+.+.++
T Consensus 171 kir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~sPL~~g~~~~~~~~~~~~~~l~~i 250 (335)
T 3h7u_A 171 KARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLKNPILNMV 250 (335)
T ss_dssp SBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCCTTCTTSCCCGGGCHHHHHH
T ss_pred CccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCCHHHHHHHHHCCCEEEEeccCcCCCCCCCCccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999873445555566677999999
Q ss_pred HHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccCCC-CCccccccc
Q 044053 246 AKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ-GPFKTLEEL 324 (327)
Q Consensus 246 a~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 324 (327)
|+++|+|++|+||+|++++|++||||+++++|+++|+++++++|+++|+++|+++.+..++.+.+|.++. .||++++++
T Consensus 251 A~~~g~t~aqvaL~w~l~~~~~vI~g~~~~~~l~enl~a~~~~L~~e~~~~i~~l~~~~~~~~~~~~~~~~~p~~~~~~~ 330 (335)
T 3h7u_A 251 AEKLGKSPAQVALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQARLVTGSFLVHETLSPYKSIEEL 330 (335)
T ss_dssp HHHHTCCHHHHHHHHHHHTTCEECCBCSCHHHHHHHHCCSSCCCCHHHHHHGGGSCCCCSCCCGGGBCTTTSSBSSHHHH
T ss_pred HHHHCcCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhHhhcCccccceeccCCCCCccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999888887775554 899999999
Q ss_pred cCC
Q 044053 325 WDD 327 (327)
Q Consensus 325 ~~~ 327 (327)
||.
T Consensus 331 ~~~ 333 (335)
T 3h7u_A 331 WDG 333 (335)
T ss_dssp TTT
T ss_pred ccc
Confidence 985
No 2
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=1.8e-71 Score=515.56 Aligned_cols=311 Identities=41% Similarity=0.722 Sum_probs=269.9
Q ss_pred ccccccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCC
Q 044053 5 TQSTVFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVS 84 (327)
Q Consensus 5 ~~~~~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~ 84 (327)
++++.+.|+|++|+ | | ++||+||||||. ++.++|+.|+++|||+||||+.||||+.||++|++.+.+|.+
T Consensus 18 ~~~~~~~m~~~~L~-t-g-~~vs~lglGt~~------~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~- 87 (331)
T 3h7r_A 18 GSHMAAPIRFFELN-T-G-AKLPCVGLGTYA------MVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFV- 87 (331)
T ss_dssp -------CCEEECT-T-S-CEEESBEEECTT------CCHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSS-
T ss_pred ceecccCCcEEECC-C-C-CEecCEeeccHH------HHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHhhcCCC-
Confidence 45577789999996 5 9 999999999997 467889999999999999999999999999999987666643
Q ss_pred CCCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 044053 85 SREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQML 164 (327)
Q Consensus 85 ~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 164 (327)
+|+++||+||+|..+.+++.+++++++||+|||+||||+|++|||+...++. .++ ..++......+++|++|++|+++
T Consensus 88 ~R~~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~-~~~-~~~~~~~~~~~e~~~aL~~l~~~ 165 (331)
T 3h7r_A 88 KREELFITSKLWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKES-LMP-TPEMLTKPDITSTWKAMEALYDS 165 (331)
T ss_dssp CGGGCEEEEEECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTC-SSC-CGGGEECCCHHHHHHHHHHHHHT
T ss_pred CchhEEEEEeeCCCCCCHHHHHHHHHHHHHHcCCCeeEEEEEecCccccccc-ccc-cccccccCCHHHHHHHHHHHHHc
Confidence 7999999999998888899999999999999999999999999997644321 111 11112234689999999999999
Q ss_pred CCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHH
Q 044053 165 GLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKE 244 (327)
Q Consensus 165 Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ 244 (327)
||||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||+++|..+++...+..+.+.+
T Consensus 166 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~g~~~~~~~~~~~~~~l~~ 245 (331)
T 3h7r_A 166 GKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQQGLHELCKSKGVHLSGYSPLGSQSKGEVRLKVLQNPIVTE 245 (331)
T ss_dssp TSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSCSCTTTTTHHHHTCHHHHH
T ss_pred CCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCCHHHHHHHHHCCCEEEEeCCCCCCCCCCCccchhcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987344444445566789999
Q ss_pred HHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccC-CCCCcccccc
Q 044053 245 IAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVS-PQGPFKTLEE 323 (327)
Q Consensus 245 ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~ 323 (327)
+|+++|+|++|+||+|++++|++||||+++++|+++|+++++++||++|++.|+++.++.++.|..|+. +.+||+|+|+
T Consensus 246 iA~~~g~t~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 325 (331)
T 3h7r_A 246 VAEKLGKTTAQVALRWGLQTGHSVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQEKFCRATEFAHETHGFYKTIEE 325 (331)
T ss_dssp HHHHHTCCHHHHHHHHHHHTTCEECCCCSCHHHHHHHTCCSSCCCCHHHHGGGGGSCCCCSCCCGGGCCTTTCSSCSHHH
T ss_pred HHHHHCcCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHHhhhcCcccCcccccCCCCccccchh
Confidence 999999999999999999999999999999999999999999999999999999999998888855544 4599999999
Q ss_pred ccCC
Q 044053 324 LWDD 327 (327)
Q Consensus 324 ~~~~ 327 (327)
+||.
T Consensus 326 ~~~~ 329 (331)
T 3h7r_A 326 LWDG 329 (331)
T ss_dssp HTTT
T ss_pred hccc
Confidence 9995
No 3
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=1.4e-70 Score=506.44 Aligned_cols=306 Identities=58% Similarity=0.969 Sum_probs=268.7
Q ss_pred ccCeee-cCC-CCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCc
Q 044053 11 NVPKLK-LSS-SSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQ 88 (327)
Q Consensus 11 ~m~~~~-Lg~-t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~ 88 (327)
.|+|++ ||+ | | ++||+|||||+.++.+.+++.++|+.|++.|||+||||+.||||+.||++|++.++.|.+ +|++
T Consensus 5 ~m~~~~~l~~~t-g-~~v~~lglGt~~~~~~~~~~~~~v~~Al~~G~~~iDTA~~YgsE~~vG~al~~~~~~g~~-~R~~ 81 (312)
T 1zgd_A 5 EIPTKVLTNTSS-Q-LKMPVVGMGSAPDFTCKKDTKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLV-TRDD 81 (312)
T ss_dssp CCCEEECTTSTT-C-CEEESBCBCCSCCTTCCSCHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGG
T ss_pred CCchhhhcCCCC-C-CCCCceeEcCcccCCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCC-cchh
Confidence 489999 999 8 9 999999999944445567889999999999999999999999999999999986655632 7999
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc
Q 044053 89 LFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK 168 (327)
Q Consensus 89 v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir 168 (327)
+||+||+|..+.+++.+++++++||+|||+||||+|++|||+...++...++...++......+++|++|++|+++||||
T Consensus 82 ~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir 161 (312)
T 1zgd_A 82 LFVTSKLWVTENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTK 161 (312)
T ss_dssp CEEEEEECGGGCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHHHHHTTSBS
T ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHHHHHHHHHHHHcCCCC
Confidence 99999999888889999999999999999999999999999754322111111111111235889999999999999999
Q ss_pred EEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHH
Q 044053 169 SIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKA 248 (327)
Q Consensus 169 ~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~ 248 (327)
+||||||+.++++++++.+.++|+++|++||+++++.+++++|+++||++++|+||++ |.+++.+..+..+.+.++|++
T Consensus 162 ~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~~~~~~~~~~~~~l~~ia~~ 240 (312)
T 1zgd_A 162 AIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQKKLREFCNAHGIVLTAFSPVRK-GASRGPNEVMENDMLKEIADA 240 (312)
T ss_dssp CEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TTTTSSCTTTTCHHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCCHHHHHHHHHcCCEEEEecCCCC-CCCCCCccccccHHHHHHHHH
Confidence 9999999999999999988889999999999999999999999999999999999997 877665556677999999999
Q ss_pred cCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccCCCCCccccccccCC
Q 044053 249 HGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQGPFKTLEELWDD 327 (327)
Q Consensus 249 ~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (327)
+|+|++|+||+|++++++++|||+++++|+++|+++++++||+++++.|+++..+.++.|.++ | +|+++|||
T Consensus 241 ~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~~-----~--~~~~~~~~ 312 (312)
T 1zgd_A 241 HGKSVAQISLRWLYEQGVTFVPKSYDKERMNQNLRIFDWSLTKEDHEKIAQIKQNRLIPGPTK-----P--GLNDLYDD 312 (312)
T ss_dssp HTSCHHHHHHHHHHHTTCEECCCCCSHHHHHHTTCCSSCCCCHHHHHHHTTSCCCCSCCCSEE-----S--CCTTTTCC
T ss_pred cCCCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHhccCccCCCCC-----C--ChHHhccC
Confidence 999999999999999999999999999999999999999999999999999998877777664 2 78999997
No 4
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=1.9e-68 Score=494.80 Aligned_cols=305 Identities=32% Similarity=0.589 Sum_probs=266.4
Q ss_pred cccCeeecCCCCCCcccCcceeeccccC-CChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCc
Q 044053 10 FNVPKLKLSSSSGHLNMPVIGLGCAVDK-SDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQ 88 (327)
Q Consensus 10 ~~m~~~~Lg~t~g~~~vs~lglG~~~~~-~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~ 88 (327)
+.|+|++| +| | ++||+||||||+++ .+.+++.++|+.|+++|||+||||+.||+|+.||++|++.++.|.. +|++
T Consensus 4 ~~m~~~~L-~t-g-~~v~~lglGt~~~~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~-~R~~ 79 (324)
T 3ln3_A 4 SXQHCVXL-ND-G-HLIPALGFGTYXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSXIXAGVV-XRED 79 (324)
T ss_dssp --CCEEEC-TT-S-CEEESSEEECCCCTTSCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGG
T ss_pred cCCceEEC-CC-C-CCcCCeeecCCcccCCChHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHhhccCCc-ccce
Confidence 46999999 66 9 99999999999976 6788999999999999999999999999999999999987766532 7999
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHcC
Q 044053 89 LFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKE---DLLPMDYRGVWEAMEESQMLG 165 (327)
Q Consensus 89 v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~G 165 (327)
+||+||+|..+.+++.+++++++||+|||+||||+|++|||+...++...++.+.+ ........++|++|++|+++|
T Consensus 80 ~~I~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~G 159 (324)
T 3ln3_A 80 LFVTTKLWCTCFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAG 159 (324)
T ss_dssp CEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTT
T ss_pred eEEEeeeCCccCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCHHHHHHHHHHHHhcC
Confidence 99999999888899999999999999999999999999999875443222221111 112356899999999999999
Q ss_pred CccEEEeccccHHHHHHHHHhCCCC--CeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCC-----CCcccC
Q 044053 166 LTKSIGLSNFSCKKIETILTFATIP--PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG-----SNQVLE 238 (327)
Q Consensus 166 kir~iGvS~~~~~~l~~~~~~~~~~--~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~-----~~~~~~ 238 (327)
|||+||||||++++++++++.+.++ |+++|++||++.++.+++++|+++||++++|+||++ |.+.. .+..+.
T Consensus 160 kir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-g~~~~~~~~~~~~~~~ 238 (324)
T 3ln3_A 160 LVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQRXLLDYCESXDIVLVAYGALGT-QRYXEWVDQNSPVLLN 238 (324)
T ss_dssp SEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSCTTSCCGGG
T ss_pred CeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccchHHHHHHHHHcCCEEEEecCCCC-CCcccccccCCcchhc
Confidence 9999999999999999999988776 999999999999999999999999999999999997 76421 122455
Q ss_pred hHHHHHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccCCC--C
Q 044053 239 NEALKEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ--G 316 (327)
Q Consensus 239 ~~~l~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~--~ 316 (327)
.+.+.++|+++|+|++|+||+|++++|++||||+++++|+++|+++++++||++|++.|+++..+.|+....++..| .
T Consensus 239 ~~~l~~ia~~~g~t~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~l~~~~r~~~~~~~~~~~~~ 318 (324)
T 3ln3_A 239 DPVLCDVAXXNXRSPALIALRYLIQRGIVPLAQSFXENEMRENLQVFGFQLSPEDMXTLDGLNXNFRYLPAEFLVDHPEY 318 (324)
T ss_dssp CHHHHHHHHHHTSCHHHHHHHHHHHTTCEEEECCSSHHHHHHHGGGGGCCCCHHHHHHHHTTCCCCCSCCCGGGCSSTTC
T ss_pred CHHHHHHHHhhCCCHHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhcccCCcccCchhhhcCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999888766665544 7
Q ss_pred Ccc
Q 044053 317 PFK 319 (327)
Q Consensus 317 ~~~ 319 (327)
||+
T Consensus 319 p~~ 321 (324)
T 3ln3_A 319 PFV 321 (324)
T ss_dssp TTS
T ss_pred CCC
Confidence 884
No 5
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=1.8e-67 Score=487.93 Aligned_cols=305 Identities=34% Similarity=0.611 Sum_probs=261.4
Q ss_pred cccCeeecCCCCCCcccCcceeeccccC-CChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCc
Q 044053 10 FNVPKLKLSSSSGHLNMPVIGLGCAVDK-SDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQ 88 (327)
Q Consensus 10 ~~m~~~~Lg~t~g~~~vs~lglG~~~~~-~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~ 88 (327)
+.|++++|+ | | ++||+||||||.++ .+.+++.++|+.|+++|||+||||+.||+|+.||++|++.+++|.. +|++
T Consensus 3 ~~~~~~~L~-t-g-~~v~~lglGt~~~g~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~ 78 (323)
T 1afs_A 3 SISLRVALN-D-G-NFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTV-KRED 78 (323)
T ss_dssp GGGCEEECT-T-S-CEEESSEEECCCCTTSCTTHHHHHHHHHHHTTCCEEECCTTTTCHHHHHHHHHHHHHTTSC-CGGG
T ss_pred CCCceEECC-C-C-CeECCeeEecccCCCCCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHHhcCCC-ChHH
Confidence 568999995 5 9 99999999999776 5678899999999999999999999999999999999986655622 7999
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHcC
Q 044053 89 LFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKED---LLPMDYRGVWEAMEESQMLG 165 (327)
Q Consensus 89 v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~G 165 (327)
+||+||+|....+++.+++++++||+|||+||||+|++|||+...++...++.+.+. .......++|++|++|+++|
T Consensus 79 ~~I~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~G 158 (323)
T 1afs_A 79 IFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAG 158 (323)
T ss_dssp CEEEEEECGGGCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHTT
T ss_pred eEEEEecCCCcCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHcC
Confidence 999999988778899999999999999999999999999996432211111100000 00235789999999999999
Q ss_pred CccEEEeccccHHHHHHHHHhCCC--CCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCC-----CCcccC
Q 044053 166 LTKSIGLSNFSCKKIETILTFATI--PPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG-----SNQVLE 238 (327)
Q Consensus 166 kir~iGvS~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~-----~~~~~~ 238 (327)
|||+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+++ .+..+.
T Consensus 159 kir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~ 237 (323)
T 1afs_A 159 LAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGS-SRDKTWVDQKSPVLLD 237 (323)
T ss_dssp SEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSC-CCCTTTSCTTSCCGGG
T ss_pred CcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccchHHHHHHHHHcCCEEEEecCccC-CccccccccCCcchhc
Confidence 999999999999999999998888 8999999999999999999999999999999999998 88752 123456
Q ss_pred hHHHHHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccCCC--C
Q 044053 239 NEALKEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ--G 316 (327)
Q Consensus 239 ~~~l~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~--~ 316 (327)
.+.+.++|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++..+.+.....+..++ -
T Consensus 238 ~~~l~~ia~~~g~s~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (323)
T 1afs_A 238 DPVLCAIAKKYKQTPALVALRYQLQRGVVPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLNRNFRYNNAKYFDDHPNH 317 (323)
T ss_dssp CHHHHHHHHHTTCCHHHHHHHHHHHTTCEEEECCSCHHHHHHHTTTTSCCCCHHHHHHHHTTCCCCCSCCCGGGTTCTTC
T ss_pred CHHHHHHHHHhCCCHHHHHHHHHHhCCCEEeeCCCCHHHHHHHHhhccCCCCHHHHHHHHhhcccCCccchhhccCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999987666544444444 3
Q ss_pred Ccc
Q 044053 317 PFK 319 (327)
Q Consensus 317 ~~~ 319 (327)
||+
T Consensus 318 ~~~ 320 (323)
T 1afs_A 318 PFT 320 (323)
T ss_dssp CC-
T ss_pred CCC
Confidence 554
No 6
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=1.3e-66 Score=482.78 Aligned_cols=300 Identities=37% Similarity=0.638 Sum_probs=259.4
Q ss_pred ccCeeecCCCCCCcccCcceeeccccC--CChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCc
Q 044053 11 NVPKLKLSSSSGHLNMPVIGLGCAVDK--SDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQ 88 (327)
Q Consensus 11 ~m~~~~Lg~t~g~~~vs~lglG~~~~~--~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~ 88 (327)
.|++++| +| | ++||+||||||.++ .+.+++.++|+.|++.|||+||||+.||+|+.||++|++.+.+|.. +|++
T Consensus 6 ~~~~~~L-~t-g-~~v~~lglGt~~~g~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~ 81 (326)
T 3buv_A 6 ASHRIPL-SD-G-NSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKV-RRED 81 (326)
T ss_dssp SCCEEEC-TT-S-CEEESBCEECCCCGGGCCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGG
T ss_pred CCCeEEC-CC-C-CeeCCeeEcccCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCC-ChhH
Confidence 4689999 55 9 99999999999976 6778899999999999999999999999999999999986655622 7999
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHcC
Q 044053 89 LFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKE---DLLPMDYRGVWEAMEESQMLG 165 (327)
Q Consensus 89 v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~G 165 (327)
+||+||+|..+.+++.+++++++||+|||+||||+|++|||+...++...++.+.+ ........++|++|++|+++|
T Consensus 82 ~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~G 161 (326)
T 3buv_A 82 IFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAG 161 (326)
T ss_dssp CEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTT
T ss_pred eEEEeeeCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccHHHHHHHHHHHHHcC
Confidence 99999999888889999999999999999999999999999764322111110000 001235789999999999999
Q ss_pred CccEEEeccccHHHHHHHHHhCCCC--CeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCC-----CCcccC
Q 044053 166 LTKSIGLSNFSCKKIETILTFATIP--PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG-----SNQVLE 238 (327)
Q Consensus 166 kir~iGvS~~~~~~l~~~~~~~~~~--~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~-----~~~~~~ 238 (327)
|||+||||||+.++++++++.+.++ |+++|++||++.++.+++++|+++||++++|+||++ |.++. .+..+.
T Consensus 162 kir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~ 240 (326)
T 3buv_A 162 LVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGT-SRNPIWVNVSSPPLLK 240 (326)
T ss_dssp SEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-CCCTTTSCTTSCCGGG
T ss_pred CccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCcHHHHHHHHHcCCEEEEeccccC-CccccccccCCccccc
Confidence 9999999999999999999988888 999999999999999999999999999999999998 87641 123455
Q ss_pred hHHHHHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccCCC
Q 044053 239 NEALKEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ 315 (327)
Q Consensus 239 ~~~l~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~ 315 (327)
.+.+.++|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++..+.+.+...+..+|
T Consensus 241 ~~~l~~ia~~~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~~~~~~ 317 (326)
T 3buv_A 241 DALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRFVELLMWRDH 317 (326)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHHTTCEECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCSCCSCCCGGGTTS
T ss_pred cHHHHHHHHHhCCCHHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhccCCccccchhccCC
Confidence 78999999999999999999999999999999999999999999999999999999999999987666543344444
No 7
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=7.2e-67 Score=482.62 Aligned_cols=295 Identities=34% Similarity=0.580 Sum_probs=256.9
Q ss_pred cCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEE
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFI 91 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I 91 (327)
+++++|+ | | ++||+||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.||++|++.++.|.. +|+++||
T Consensus 5 ~~~~~l~-~-g-~~vs~lglGt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~-~R~~~~i 78 (317)
T 1qwk_A 5 TASIKLS-N-G-VEMPVIGLGTWQ--SSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVV-KREELFI 78 (317)
T ss_dssp CCEEECT-T-S-CEEESBCEECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHTSC-CGGGCEE
T ss_pred cceEECC-C-C-CEeCCeeEECCc--CCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCC-ChhheEE
Confidence 4789995 5 9 999999999998 5688899999999999999999999999999999999985544522 7999999
Q ss_pred EeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE
Q 044053 92 TSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIG 171 (327)
Q Consensus 92 ~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iG 171 (327)
+||+|..+.+++.+++++++||+|||+||||+|++|||+...++.. .+......++|++|++|+++||||+||
T Consensus 79 ~TK~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~-------~~~~~~~~e~~~al~~l~~~Gkir~iG 151 (317)
T 1qwk_A 79 TTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMS-------EHIASPVEDVWRQFDAVYKAGLAKAVG 151 (317)
T ss_dssp EEEECTTTSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSC-------SEECCCHHHHHHHHHHHHHTTSBSSEE
T ss_pred EeeeCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccc-------cccCCCHHHHHHHHHHHHHcCCeeEEE
Confidence 9999988888999999999999999999999999999975322100 011234889999999999999999999
Q ss_pred eccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccC--C-----------CCcccC
Q 044053 172 LSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIY--G-----------SNQVLE 238 (327)
Q Consensus 172 vS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~--~-----------~~~~~~ 238 (327)
||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.++ . .+..+.
T Consensus 152 vSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~~~~~~~ 230 (317)
T 1qwk_A 152 VSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGS-PGRVNFTLPTGQKLDWAPAPSDLQ 230 (317)
T ss_dssp EESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-CCEECCBCTTCCBCCCEECSSGGG
T ss_pred ecCCCHHHHHHHHHhcCCccceecceeccccCcHHHHHHHHHcCCEEEEecCccC-CCcccccccccccccccccchhhc
Confidence 9999999999999998888999999999999999999999999999999999998 8653 0 122445
Q ss_pred hHHHHHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccCCC--C
Q 044053 239 NEALKEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ--G 316 (327)
Q Consensus 239 ~~~l~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~--~ 316 (327)
.+.+.++|+++|+|++|+||+|++++|++||||+++++|+++|+++++++||+++++.|+++..+.+.....+...| .
T Consensus 231 ~~~l~~ia~~~g~s~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~~~~~~~~~~~~~ 310 (317)
T 1qwk_A 231 DQNVLALAEKTHKTPAQVLLRYALDRGCAILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLFLQDFMTGHPED 310 (317)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHHTTCEEECCCCSHHHHHHHHCCSSCCCCHHHHHHHTTTCCCCCSCCCGGGTTCTTC
T ss_pred cHHHHHHHHHHCcCHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHHhhcCccccchhccCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999987665443333444 4
Q ss_pred Cccc
Q 044053 317 PFKT 320 (327)
Q Consensus 317 ~~~~ 320 (327)
||++
T Consensus 311 ~~~~ 314 (317)
T 1qwk_A 311 AFAA 314 (317)
T ss_dssp TTGG
T ss_pred CCCc
Confidence 6754
No 8
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=1.3e-66 Score=483.62 Aligned_cols=305 Identities=37% Similarity=0.589 Sum_probs=259.0
Q ss_pred cccCeeecCCCCCCcccCcceeeccccC-CChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCc
Q 044053 10 FNVPKLKLSSSSGHLNMPVIGLGCAVDK-SDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQ 88 (327)
Q Consensus 10 ~~m~~~~Lg~t~g~~~vs~lglG~~~~~-~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~ 88 (327)
+.+++++| +| | ++||+||||||.++ .+.+++.++|+.|++.|||+||||+.||+|+.||++|++.++.|.. +|++
T Consensus 3 ~~~~~~~L-~t-g-~~v~~lglGt~~~~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~~~~-~R~~ 78 (331)
T 1s1p_A 3 SKQQCVKL-ND-G-HFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSV-KRED 78 (331)
T ss_dssp ---CEEEC-TT-S-CEEESEEEECCCCTTSCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGG
T ss_pred CCCCeEEC-CC-C-CEeCCeeEcCccCCCCCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHHhcCCC-Cchh
Confidence 46789999 45 9 99999999999765 5678899999999999999999999999999999999986655622 7999
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHcC
Q 044053 89 LFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKE---DLLPMDYRGVWEAMEESQMLG 165 (327)
Q Consensus 89 v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~G 165 (327)
+||+||+|....+++.+++++++||+|||+||||+|++|||....++...+|.+.+ ........++|++|++|+++|
T Consensus 79 ~~I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~G 158 (331)
T 1s1p_A 79 IFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAG 158 (331)
T ss_dssp CEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTT
T ss_pred eEEEeccCCccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHHHHHHHHHHHHHcC
Confidence 99999999878889999999999999999999999999999654322111111100 001235789999999999999
Q ss_pred CccEEEeccccHHHHHHHHHhCCC--CCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCC-----CCcccC
Q 044053 166 LTKSIGLSNFSCKKIETILTFATI--PPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG-----SNQVLE 238 (327)
Q Consensus 166 kir~iGvS~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~-----~~~~~~ 238 (327)
|||+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+++ .+..+.
T Consensus 159 kir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~ 237 (331)
T 1s1p_A 159 LAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGS-QRDKRWVDPNSPVLLE 237 (331)
T ss_dssp SEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSCTTSCCGGG
T ss_pred CccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcChHHHHHHHHHcCCEEEEeccccC-CcccccccCCCccccc
Confidence 999999999999999999998888 8999999999999999999999999999999999998 88742 123455
Q ss_pred hHHHHHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccCCC--C
Q 044053 239 NEALKEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ--G 316 (327)
Q Consensus 239 ~~~l~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~--~ 316 (327)
.+.+.++|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++..+.+.....+..++ -
T Consensus 238 ~~~l~~ia~~~g~s~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (331)
T 1s1p_A 238 DPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNSDSFASHPNY 317 (331)
T ss_dssp CHHHHHHHHHHTSCHHHHHHHHHHHTTCEEEEECCSHHHHHHHGGGGGCCCCHHHHHHHHTTCCCCCSCCCHHHHTSTTC
T ss_pred CHHHHHHHHHhCCCHHHHHHHHHHhCCCEEeeCCCCHHHHHHHhhhcCCCcCHHHHHHHHHHhcCCcccchhhccCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999887665433333334 3
Q ss_pred Ccc
Q 044053 317 PFK 319 (327)
Q Consensus 317 ~~~ 319 (327)
||+
T Consensus 318 ~~~ 320 (331)
T 1s1p_A 318 PYS 320 (331)
T ss_dssp CCC
T ss_pred CCc
Confidence 553
No 9
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=1.1e-66 Score=475.39 Aligned_cols=269 Identities=37% Similarity=0.680 Sum_probs=251.4
Q ss_pred cccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCC
Q 044053 8 TVFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSRE 87 (327)
Q Consensus 8 ~~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~ 87 (327)
|...|+|++|++ | ++||.||||||+++ +.+++.++|+.|+++|||+||||+.||||+.+|++|+.. +. +|+
T Consensus 9 m~~~~~~v~Ln~--G-~~ip~lGlGtw~~~-d~~e~~~~v~~Al~~Gin~~DTA~~YgsE~~vG~~l~~~---~~--~r~ 79 (290)
T 4gie_A 9 MNCNYNCVTLHN--S-VRMPQLGLGVWRAQ-DGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRES---GV--PRE 79 (290)
T ss_dssp CSSSSCEEECTT--S-CEEESBCEECTTCC-TTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHH---CC--CGG
T ss_pred cCCCCCEEEcCC--C-CCccceeEECCCCC-CHHHHHHHHHHHHHcCCCEEecccccCCHHHHHHHHHhc---CC--cch
Confidence 445799999976 9 99999999999874 667899999999999999999999999999999999986 65 899
Q ss_pred cEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 044053 88 QLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLT 167 (327)
Q Consensus 88 ~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gki 167 (327)
+++|+||++....+++.+++++++||+|||+||||+|++|||+.. ...++|++|++|+++|||
T Consensus 80 ~~~i~tk~~~~~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~-----------------~~~e~~~al~~l~~~Gki 142 (290)
T 4gie_A 80 EVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK-----------------KFVDTWKALEKLYEEKKV 142 (290)
T ss_dssp GSEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSS-----------------SHHHHHHHHHHHHHTTSE
T ss_pred hccccccccccCCChHHHHHHHHHHHHHhCCCceeeEEecCCCCC-----------------cchHHHHHHHHHHHCCCc
Confidence 999999999988899999999999999999999999999998642 378999999999999999
Q ss_pred cEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHH
Q 044053 168 KSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAK 247 (327)
Q Consensus 168 r~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~ 247 (327)
|+||||||+++++.++.+.+.+++.++|+++++..++.+++++|+++||++++|+||++ |.+.+ ....+.+.++|+
T Consensus 143 r~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spl~~-G~l~~---~~~~~~l~~iA~ 218 (290)
T 4gie_A 143 RAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGS-GEEAG---ILKNHVLGEIAK 218 (290)
T ss_dssp EEEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-SGGGC---GGGCHHHHHHHH
T ss_pred ceeeecCCCHHHHHHHHHhccCCCceeeEeccccchhHHHHHHHHHcCceEeeeccccc-ccccc---cchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 88754 344678999999
Q ss_pred HcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCcc
Q 044053 248 AHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 248 ~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 306 (327)
++|+|++|+||+|++++|+++|||+++++|+++|+++++++||++|+++|+++.++.|+
T Consensus 219 ~~g~t~aqvaL~w~l~~~~v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~ 277 (290)
T 4gie_A 219 KHNKSPAQVVIRWDIQHGIVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRI 277 (290)
T ss_dssp HHTCCHHHHHHHHHHHTTCEECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred HhCCCHHHHHHHHHHhCCCEEEECCCCHHHHHHHHhhcCCCCCHHHHHHHhccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999988776
No 10
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=5.2e-67 Score=475.63 Aligned_cols=273 Identities=35% Similarity=0.641 Sum_probs=244.9
Q ss_pred CCCcccccccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhc
Q 044053 1 MDSSTQSTVFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRL 80 (327)
Q Consensus 1 ~~~~~~~~~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~ 80 (327)
|+++... +..|++++| +| | ++||+||||||+++ .+++.++|+.|++.|||+||||+.||+|+.||++|++.
T Consensus 1 ~~~~~~~-~~~m~~~~l-~~-g-~~v~~lglGt~~~~--~~~~~~~v~~Al~~Gi~~iDTA~~Yg~E~~lG~al~~~--- 71 (283)
T 2wzm_A 1 MTASHGQ-AAAIPTVTL-ND-D-NTLPVVGIGVGELS--DSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAAS--- 71 (283)
T ss_dssp ----------CCCEEEC-TT-S-CEEESEEEECTTCC--HHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHT---
T ss_pred CCCCCCC-CCCCceEEC-CC-C-CEEcceeEECCCCC--hHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHhc---
Confidence 6666664 467999999 66 9 99999999999954 57899999999999999999999999999999999974
Q ss_pred CCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 044053 81 GLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEE 160 (327)
Q Consensus 81 g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 160 (327)
++ +|+++||+||+|..+.+++.+++++++||+|||+||||+|++|||+... ....++|++|++
T Consensus 72 ~~--~R~~v~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~---------------~~~~e~~~al~~ 134 (283)
T 2wzm_A 72 GI--PRDEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDT---------------SKYVDSWGGLMK 134 (283)
T ss_dssp CC--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCH---------------HHHHHHHHHHHH
T ss_pred CC--CcccEEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCC---------------CCHHHHHHHHHH
Confidence 54 7999999999998888899999999999999999999999999996421 136899999999
Q ss_pred HHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChH
Q 044053 161 SQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENE 240 (327)
Q Consensus 161 l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~ 240 (327)
|+++||||+||||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+ +..+
T Consensus 135 l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l------~~~~ 207 (283)
T 2wzm_A 135 VKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPLGV-GRL------LDHP 207 (283)
T ss_dssp HHHTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-TGG------GGCH
T ss_pred HHHcCCccEEEEcCCCHHHHHHHHHhcCCCcccccccCCcccCCHHHHHHHHHCCCEEEEecCCCC-Ccc------cchH
Confidence 999999999999999999999999998888999999999999999999999999999999999997 743 4467
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCcc
Q 044053 241 ALKEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 241 ~l~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 306 (327)
.+.++|+++|+|++|+||+|++++|+++|+|+++++|+++|+++++++|++++++.|+++.+..+.
T Consensus 208 ~l~~ia~~~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~~~ 273 (283)
T 2wzm_A 208 AVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETLNGLDDGTRF 273 (283)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHTTCEEEECCSSHHHHHHHHCCSSCCCCHHHHHHHHTCCCCCCS
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCCc
Confidence 899999999999999999999999999999999999999999999999999999999999877543
No 11
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=1.7e-66 Score=470.88 Aligned_cols=263 Identities=41% Similarity=0.717 Sum_probs=247.1
Q ss_pred ccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEE
Q 044053 11 NVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLF 90 (327)
Q Consensus 11 ~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~ 90 (327)
.|+|++|| | | ++||+||||||+++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|+++|
T Consensus 5 ~m~~~~L~-~-g-~~v~~lglGt~~~~-~~~~~~~~l~~Al~~G~~~~DTA~~Yg~E~~lG~al~~~---~~--~R~~~~ 75 (276)
T 3f7j_A 5 LKDTVKLH-N-G-VEMPWFGLGVFKVE-NGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GV--AREELF 75 (276)
T ss_dssp TTCEEECT-T-S-CEEESBCEECTTCC-TTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHH---CS--CGGGCE
T ss_pred CcceEECC-C-C-CEecceeecCCcCC-CHHHHHHHHHHHHHcCCCEEECcCcccCHHHHHHHHhhc---CC--CcccEE
Confidence 48999998 5 9 99999999999974 568899999999999999999999999999999999976 65 799999
Q ss_pred EEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE
Q 044053 91 ITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI 170 (327)
Q Consensus 91 I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i 170 (327)
|+||++..+.+++.+++++++||+|||+||||+|++|||+.. ...++|++|++|+++||||+|
T Consensus 76 i~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~-----------------~~~~~~~~l~~l~~~Gkir~i 138 (276)
T 3f7j_A 76 ITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD-----------------KYKDTWRALEKLYKDGKIRAI 138 (276)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS-----------------SHHHHHHHHHHHHHTTSEEEE
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCC-----------------cHHHHHHHHHHHHHcCCccEE
Confidence 999999888899999999999999999999999999999642 278999999999999999999
Q ss_pred EeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcC
Q 044053 171 GLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHG 250 (327)
Q Consensus 171 GvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~ 250 (327)
|||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+. .++.+.++|+++|
T Consensus 139 GvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l~------~~~~l~~ia~~~g 211 (276)
T 3f7j_A 139 GVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQLL------DNEVLTQIAEKHN 211 (276)
T ss_dssp EEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTTT------TCHHHHHHHHHHT
T ss_pred EeccCCHHHHHHHHHhcCCCceeeeeeeccccCCHHHHHHHHHCCCEEEEecCCCC-CccC------CCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999998 8653 3578999999999
Q ss_pred CCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCcc
Q 044053 251 KTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 251 ~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 306 (327)
+|++|+||+|++++|.++|||+++++|+++|+++++++||++|++.|+++.++.++
T Consensus 212 ~t~aqval~w~l~~~~v~i~g~~~~~~l~en~~a~~~~L~~e~~~~l~~l~~~~r~ 267 (276)
T 3f7j_A 212 KSVAQVILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 267 (276)
T ss_dssp CCHHHHHHHHHHHTTCEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred CCHHHHHHHHHHhCCCEEeeCCCCHHHHHHHHhhCCCCCCHHHHHHHHhhccCCcc
Confidence 99999999999999999999999999999999999999999999999999987665
No 12
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=1.5e-66 Score=484.33 Aligned_cols=305 Identities=37% Similarity=0.727 Sum_probs=260.7
Q ss_pred ccccc-CeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHH-cCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCC
Q 044053 8 TVFNV-PKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIK-LGYRHFDTAAMYGTEKALGEAIAEALRLGLVSS 85 (327)
Q Consensus 8 ~~~~m-~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~-~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~ 85 (327)
+.+.| ++++|+ | | ++||+||||||+ .+ +++.++|+.|++ .|||+||||+.||+|+.||++|++.+..|+ +
T Consensus 32 ~~~~m~~~~~L~-t-g-~~vp~lglGt~~--~~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg~E~~vG~al~~~~~~g~--~ 103 (344)
T 2bgs_A 32 MGQGEQDHFVLK-S-G-HAMPAVGLGTWR--AG-SDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGI--D 103 (344)
T ss_dssp -----CCEEECT-T-S-CEEESBCEECTT--CG-GGHHHHHHHHHHTTCCCEEECCGGGTCHHHHHHHHHHHHHTTC--C
T ss_pred hcccCCceEECC-C-C-CccCCeeEeCCC--Cc-HHHHHHHHHHHHhcCCCEEECCCccCCHHHHHHHHHHhhhcCC--C
Confidence 33446 488995 5 9 999999999998 45 788999999999 999999999999999999999998666665 8
Q ss_pred CCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 044053 86 REQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLG 165 (327)
Q Consensus 86 R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G 165 (327)
|+++||+||+|..+.+++.+++++++||+|||+||||+|++|||+...++...+|. .+........++|++|++|+++|
T Consensus 104 R~~v~I~TK~~~~~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~-~~~~~~~~~~e~~~aLe~l~~~G 182 (344)
T 2bgs_A 104 RKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPE-AGEVLEFDMEGVWKEMENLVKDG 182 (344)
T ss_dssp GGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCC-TTCEECCCHHHHHHHHHHHHHTT
T ss_pred cccEEEEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccc-cccccCCCHHHHHHHHHHHHHcC
Confidence 99999999999878889999999999999999999999999999653221111110 00001235889999999999999
Q ss_pred CccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHH
Q 044053 166 LTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEI 245 (327)
Q Consensus 166 kir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~i 245 (327)
|||+||||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |- +..+..+.+.++
T Consensus 183 kIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~~~ll~~~~~~gI~v~a~spL~~-G~----~~~~~~~~l~~i 257 (344)
T 2bgs_A 183 LVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHITAYSPLGS-SE----KNLAHDPVVEKV 257 (344)
T ss_dssp SEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCT-TT----TCCTTCHHHHHH
T ss_pred CccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCcHHHHHHHHHCCCEEEEeCcccC-CC----chhhccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997 61 234557899999
Q ss_pred HHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCc--cccCCC-CCccccc
Q 044053 246 AKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSD--FWVSPQ-GPFKTLE 322 (327)
Q Consensus 246 a~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~--~~~~~~-~~~~~~~ 322 (327)
|+++|+|++|+||+|++++|++||||+++++||++|+++++++||+++++.|+++..+.+.+.. .+..|. .||++.+
T Consensus 258 A~~~g~s~aqvaL~w~l~~~~~vI~gs~~~~~l~eNl~a~~~~Ls~ee~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (344)
T 2bgs_A 258 ANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVLTGEELFVNKTHGPYRSAR 337 (344)
T ss_dssp HHHHTCCHHHHHHHHHHHHTCEECCBCSSHHHHHHTTCCSSCCCCHHHHHHHHHSCTTCCSCCCHHHHBCTTTCSBCSHH
T ss_pred HHHhCCCHHHHHHHHHHhCCCeEEECCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCCccchhhhhcCCcCCCCCchh
Confidence 9999999999999999999999999999999999999999999999999999999987665432 334444 5898888
Q ss_pred cccC
Q 044053 323 ELWD 326 (327)
Q Consensus 323 ~~~~ 326 (327)
++||
T Consensus 338 ~~~~ 341 (344)
T 2bgs_A 338 DVWD 341 (344)
T ss_dssp HHTT
T ss_pred hccc
Confidence 8997
No 13
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-66 Score=474.50 Aligned_cols=265 Identities=33% Similarity=0.575 Sum_probs=245.4
Q ss_pred cccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCC
Q 044053 8 TVFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSRE 87 (327)
Q Consensus 8 ~~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~ 87 (327)
..+.|+|++|| | ++||.||||||++ +.+++.++|+.|++.|||+||||+.||||+.||++|++. ++ +|+
T Consensus 20 ~~~~m~~~~l~---g-~~v~~lglGt~~~--~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~--~R~ 88 (298)
T 3up8_A 20 FQSMMHAVSSN---G-ANIPALGFGTFRM--SGAEVLRILPQALKLGFRHVDTAQIYGNEAEVGEAIQKS---GI--PRA 88 (298)
T ss_dssp GGGSCCEECCT---T-CCEESEEEECTTC--CHHHHHHHHHHHHHHTCCEEECCTTTTCHHHHHHHHHHH---TC--CGG
T ss_pred hhccCceEEeC---C-eecCCeeEECCcC--CHHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHc---CC--ChH
Confidence 34468999998 5 8999999999995 478899999999999999999999999999999999986 65 799
Q ss_pred cEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 044053 88 QLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLT 167 (327)
Q Consensus 88 ~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gki 167 (327)
++||+||++..+.+++.+++++++||+|||+||||+|++|||+... ..+++|++|++|+++|||
T Consensus 89 ~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~----------------~~~e~~~al~~l~~~Gki 152 (298)
T 3up8_A 89 DVFLTTKVWVDNYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDV----------------PMAERIGALNEVRNAGKV 152 (298)
T ss_dssp GCEEEEEECGGGCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSS----------------CHHHHHHHHHHHHHTTSE
T ss_pred HEEEEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCC----------------CHHHHHHHHHHHHHcCCc
Confidence 9999999998888999999999999999999999999999997642 388999999999999999
Q ss_pred cEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHH
Q 044053 168 KSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAK 247 (327)
Q Consensus 168 r~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~ 247 (327)
|+||||||++++++++++.++++|+++|++||++.++.+++++|+++||++++|+||++ |.+ +.++.+.++|+
T Consensus 153 r~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l------~~~~~l~~ia~ 225 (298)
T 3up8_A 153 RHIGISNFNTTQMEEAARLSDAPIATNQVEYHPYLDQTKVLQTARRLGMSLTSYYAMAN-GKV------PADPLLTEIGG 225 (298)
T ss_dssp EEEEEESCCHHHHHHHHHHCSSCEEEEEEECBTTBCCHHHHHHHHHHTCEEEEECTTGG-GHH------HHCHHHHHHHH
T ss_pred cEEEEcCCCHHHHHHHHHhCCCCceEEEEecccccccHHHHHHHHHCCCEEEEECCCcC-Ccc------cccchHHHHHH
Confidence 99999999999999999998889999999999999999999999999999999999997 764 34578999999
Q ss_pred HcCCCHHHHHHHHHHhcC-CEEeecCCCHHHHHHhhcccccccCHHHHHHHhcC-CCCCcc
Q 044053 248 AHGKTVAQVSLRWIVEQG-ATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQI-PQHRLI 306 (327)
Q Consensus 248 ~~~~s~aq~al~w~l~~~-~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~-~~~~~~ 306 (327)
++|+|++|+||+|++++| +++|||+++++|+++|+++++++||++|++.|+++ .++.|+
T Consensus 226 ~~g~s~aqvaL~w~l~~p~v~~I~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~r~ 286 (298)
T 3up8_A 226 RHGKTAAQVALRWLVQQQDVIVLSKTATEARLKENFAIFDFALTREEMAAVRELARPNGRI 286 (298)
T ss_dssp HHTCCHHHHHHHHHHTSTTEEEEECCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCTTCCC
T ss_pred HcCCCHHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHhCCCCCCHHHHHHHHHHhccCCcc
Confidence 999999999999999995 78999999999999999999999999999999999 554443
No 14
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=8.3e-66 Score=475.45 Aligned_cols=301 Identities=39% Similarity=0.651 Sum_probs=258.4
Q ss_pred cCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEE
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFI 91 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I 91 (327)
+++++| +| | ++||+||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.||++|++.+..|.. +|+++||
T Consensus 2 ~~~~~l-~t-g-~~v~~lglGt~~--~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~~~I 75 (316)
T 1us0_A 2 ASRILL-NN-G-AKMPILGLGTWK--SPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVV-KREELFI 75 (316)
T ss_dssp CSEEEC-TT-S-CEEESBCEECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSS-CGGGCEE
T ss_pred CceEEC-CC-C-CEECCEeEECCc--CCHHHHHHHHHHHHHcCCCEEEcccccCCHHHHHHHHHHHHhcCCC-ChhHeEE
Confidence 357889 45 9 999999999998 5688899999999999999999999999999999999986655622 7999999
Q ss_pred EeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHcCCcc
Q 044053 92 TSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKED---LLPMDYRGVWEAMEESQMLGLTK 168 (327)
Q Consensus 92 ~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~Gkir 168 (327)
+||+|..+.+++.+++++++||+|||+||||+|++|||+...++...+|.+.+. .......++|++|++|+++||||
T Consensus 76 ~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir 155 (316)
T 1us0_A 76 VSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVK 155 (316)
T ss_dssp EEEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBS
T ss_pred EEeeCCCcCCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHHHHHHHHHHHCCCcc
Confidence 999998888899999999999999999999999999997643221111111100 01235789999999999999999
Q ss_pred EEEeccccHHHHHHHHHhCCC--CCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccC-C---CCcccChHHH
Q 044053 169 SIGLSNFSCKKIETILTFATI--PPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIY-G---SNQVLENEAL 242 (327)
Q Consensus 169 ~iGvS~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~-~---~~~~~~~~~l 242 (327)
+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+. . .+..+..+.+
T Consensus 156 ~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~l 234 (316)
T 1us0_A 156 AIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGS-PDRPWAKPEDPSLLEDPRI 234 (316)
T ss_dssp CEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-TTCTTCCTTSCCTTTCHHH
T ss_pred EEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCCHHHHHHHHHcCCEEEEeccccc-CccccccCCCcccccCHHH
Confidence 999999999999999998888 8999999999999999999999999999999999998 8652 1 1234567899
Q ss_pred HHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccCCC--CCcc
Q 044053 243 KEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ--GPFK 319 (327)
Q Consensus 243 ~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~ 319 (327)
.++|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++..+.+.+...+..++ .||+
T Consensus 235 ~~ia~~~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 313 (316)
T 1us0_A 235 KAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALLSCTSHKDYPFH 313 (316)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHTTCEECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCSCCCGGGTTSTTCCCC
T ss_pred HHHHHHhCCCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhccCCccccchhccCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999988776554444444 3553
No 15
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=8.7e-66 Score=475.31 Aligned_cols=301 Identities=40% Similarity=0.634 Sum_probs=258.7
Q ss_pred cCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEE
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFI 91 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I 91 (327)
|++++|++ | ++||.||||||+ .+.+++.++|+.|+++|||+||||+.||+|+.||++|++.+..+.. +|+++||
T Consensus 2 ~~~~~l~t--g-~~v~~lglGt~~--~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~-~R~~v~I 75 (316)
T 3o3r_A 2 TTFVKLRT--K-AKMPLVGLGTWK--SPPGQVKEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAV-RREDLFI 75 (316)
T ss_dssp CCEEECTT--S-CEEESBEEBCTT--CCTTHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSC-CGGGCEE
T ss_pred CCeEECCC--C-CEeCCeeeECCc--CCcHHHHHHHHHHHHcCCCEEEccCccCCHHHHHHHHHHHHhhCCC-ChHHcEE
Confidence 46788876 9 999999999998 4678899999999999999999999999999999999987665532 7999999
Q ss_pred EeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHcCCcc
Q 044053 92 TSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKED---LLPMDYRGVWEAMEESQMLGLTK 168 (327)
Q Consensus 92 ~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~Gkir 168 (327)
+||+|....+++.+++++++||+|||+||||+|++|||+...++...++.+... ......+++|++|++|+++||||
T Consensus 76 ~TK~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir 155 (316)
T 3o3r_A 76 VSKLWSTFFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVK 155 (316)
T ss_dssp EEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSEE
T ss_pred EeeeCCCcCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHcCCCc
Confidence 999998888899999999999999999999999999998654433222211110 12356899999999999999999
Q ss_pred EEEeccccHHHHHHHHHhCCC--CCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCcc-CC---CCcccChHHH
Q 044053 169 SIGLSNFSCKKIETILTFATI--PPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKI-YG---SNQVLENEAL 242 (327)
Q Consensus 169 ~iGvS~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l-~~---~~~~~~~~~l 242 (327)
+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.. +. ....+..+.+
T Consensus 156 ~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~~~~~~~~~~~~~~~l 234 (316)
T 3o3r_A 156 ALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGIAVIAYSPLGS-PDRPYAKPEDPVVLEIPKI 234 (316)
T ss_dssp EEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHTTTCEEEEECTTCC-TTCTTCCTTSCCSTTCHHH
T ss_pred EEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccchHHHHHHHHHcCCEEEEecccCC-CCCccccccchhhhcCHHH
Confidence 999999999999999987765 5899999999999999999999999999999999998 632 11 1234556899
Q ss_pred HHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCccccCCC--CCcc
Q 044053 243 KEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ--GPFK 319 (327)
Q Consensus 243 ~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~ 319 (327)
.++|+++|+|++|+||+|++++|++||||+++++|+++|+++++++||++|++.|+++.++.+.....+...| -||+
T Consensus 235 ~~ia~~~g~t~aqvaL~w~l~~~~~vi~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~r~~~~~~~~~~~~~pf~ 313 (316)
T 3o3r_A 235 KEIAAKHKKTIAQVLIRFHVQRNVAVIPKSVTLSHIKENIQVFDFQLSEEDMAAILSLNRNWRACGLFVTSDEEDFPFH 313 (316)
T ss_dssp HHHHHHHTCCHHHHHHHHHHTTTCEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCCCSCGGGTTSTTCGGG
T ss_pred HHHHHHhCCCHHHHHHHHHHhCCCEEeCCCCCHHHHHHHHhhCCCCcCHHHHHHHHccccCCccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998887665544433 5553
No 16
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=9.5e-67 Score=473.68 Aligned_cols=262 Identities=40% Similarity=0.712 Sum_probs=242.6
Q ss_pred ccccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCC
Q 044053 7 STVFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSR 86 (327)
Q Consensus 7 ~~~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R 86 (327)
++.++|+|++|+ | | ++||+||||||++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|
T Consensus 21 ~~~~~m~~~~L~-~-g-~~v~~lglGt~~~--~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~--~R 90 (283)
T 3o0k_A 21 SMIMTVPTVKLN-D-G-NHIPQLGYGVWQI--SNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGKAINGS---GI--AR 90 (283)
T ss_dssp CEECCCCEEECT-T-S-CEEESBCEECCSC--CHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHTS---SS--CG
T ss_pred cccCCCceEECC-C-C-CEECCeeEECccC--CHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---CC--Cc
Confidence 355679999995 4 9 9999999999994 578899999999999999999999999999999999964 54 79
Q ss_pred CcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 044053 87 EQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGL 166 (327)
Q Consensus 87 ~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk 166 (327)
+++||+||++..+.+++.+++++++||+|||+||||+|++|||++.. ....++|++|++|+++||
T Consensus 91 ~~~~i~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~---------------~~~~e~~~al~~l~~~Gk 155 (283)
T 3o0k_A 91 ADIFLTTKLWNSDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSK---------------DLFMETWRAFIKLKEEGR 155 (283)
T ss_dssp GGCEEEEEECGGGCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCH---------------HHHHHHHHHHHHHHHTTS
T ss_pred ccEEEEEccCCCCCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCc---------------ccHHHHHHHHHHHHHCCC
Confidence 99999999998888899999999999999999999999999996531 136899999999999999
Q ss_pred ccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHH
Q 044053 167 TKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIA 246 (327)
Q Consensus 167 ir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia 246 (327)
||+||||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+ +.++.+.++|
T Consensus 156 ir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l------~~~~~l~~ia 228 (283)
T 3o0k_A 156 VKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQDELRLFHGKHDIATEAWSPLGQ-GKL------LEDPTLKSIA 228 (283)
T ss_dssp EEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-C-C------TTCHHHHHHH
T ss_pred cceEEeccCcHHHHHHHHHhCCCCeEEEEeecCcccCcHHHHHHHHHCCcEEEEecCCCC-Ccc------ccchHHHHHH
Confidence 999999999999999999988888999999999999999999999999999999999997 765 3457999999
Q ss_pred HHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcC
Q 044053 247 KAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQI 300 (327)
Q Consensus 247 ~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~ 300 (327)
+++|+|++|+||+|++++|.++|||+++++|+++|+++++++||++|++.|+++
T Consensus 229 ~~~g~t~aqvaL~w~l~~~~v~I~g~~~~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 229 EKHAKSVAQIILRWHIETGNIVIPKSITPARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp HHHTSCHHHHHHHHHHHHTCEECCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred HHhCCCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 999999999999999999988999999999999999999999999999999986
No 17
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=4e-66 Score=474.87 Aligned_cols=263 Identities=41% Similarity=0.717 Sum_probs=246.8
Q ss_pred ccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEE
Q 044053 11 NVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLF 90 (327)
Q Consensus 11 ~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~ 90 (327)
.|+|++|| | | ++||+||||||+++ +.+++.++|+.|++.|||+||||+.||+|+.||++|++. ++ +|+++|
T Consensus 39 ~m~~~~L~-~-g-~~v~~lglGt~~~~-~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~--~R~~v~ 109 (310)
T 3b3e_A 39 LKDTVKLH-N-G-VEMPWFGLGVFKVE-NGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GV--AREELF 109 (310)
T ss_dssp TTCEEECT-T-S-CEEESBCEECTTCC-TTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHS---SS--CGGGCE
T ss_pred ccceEECC-C-C-CeeCceeeeCCcCC-CHHHHHHHHHHHHHcCCCEEECCCccCCHHHHHHHHHhc---CC--CcceEE
Confidence 49999998 4 9 99999999999974 568899999999999999999999999999999999974 55 799999
Q ss_pred EEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE
Q 044053 91 ITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI 170 (327)
Q Consensus 91 I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i 170 (327)
|+||+|..+.+++.+++++++||+|||+||||+|++|||+.. ..+++|++|++|+++||||+|
T Consensus 110 I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~-----------------~~~e~~~al~~l~~~Gkir~i 172 (310)
T 3b3e_A 110 ITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD-----------------KYKDTWRALEKLYKDGKIRAI 172 (310)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS-----------------CHHHHHHHHHHHHHTTSEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCcc-----------------cHHHHHHHHHHHHHcCCcceE
Confidence 999999888889999999999999999999999999999642 278999999999999999999
Q ss_pred EeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcC
Q 044053 171 GLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHG 250 (327)
Q Consensus 171 GvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~ 250 (327)
|||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.|. .++.+.++|+++|
T Consensus 173 GvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l~------~~~~l~~iA~~~g 245 (310)
T 3b3e_A 173 GVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQLL------DNEVLTQIAEKHN 245 (310)
T ss_dssp EEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTTT------TCHHHHHHHHHHT
T ss_pred eecCCCHHHHHHHHHhcCCCcceeeeeccCccCCHHHHHHHHHcCCEEEEeccccC-CCcC------CCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999998 8653 3578999999999
Q ss_pred CCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCcc
Q 044053 251 KTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 251 ~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 306 (327)
+|++|+||+|++++|.++|||+++++|+++|+++++++||++|++.|+++.++.++
T Consensus 246 ~t~aqvaL~w~l~~~~v~I~gs~~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~r~ 301 (310)
T 3b3e_A 246 KSVAQVILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 301 (310)
T ss_dssp CCHHHHHHHHHHHTTCEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred CCHHHHHHHHHHcCCCeEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHhhhhCCcc
Confidence 99999999999999999999999999999999999999999999999999987665
No 18
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=4e-66 Score=478.79 Aligned_cols=293 Identities=38% Similarity=0.606 Sum_probs=253.9
Q ss_pred cccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcE
Q 044053 10 FNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQL 89 (327)
Q Consensus 10 ~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v 89 (327)
..|++++|+ | | ++||+||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.||++|++.+..|.. +|+++
T Consensus 3 ~~m~~~~L~-t-g-~~v~~lglGt~~--~~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~~ 76 (322)
T 1mi3_A 3 ASIPDIKLS-S-G-HLMPSIGFGCWK--LANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLV-KREEI 76 (322)
T ss_dssp -CCCEEECT-T-S-CEEESBCEECTT--CCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSC-CGGGC
T ss_pred CCCceEECC-C-C-CEECCeeeeCCc--CCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCC-ChhhE
Confidence 468999995 5 9 999999999998 5788999999999999999999999999999999999986655622 79999
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCC--CCCCCCCCCC----C-C--CCCCCHHHHHHHHHH
Q 044053 90 FITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSK--PGEVGFPVPK----E-D--LLPMDYRGVWEAMEE 160 (327)
Q Consensus 90 ~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~--~~~~~~~~~~----~-~--~~~~~~~~~~~~l~~ 160 (327)
||+||+|....+++.+++++++||+|||+||||+|++|||+... ++...+|.+. + . ......+++|++|++
T Consensus 77 ~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~ 156 (322)
T 1mi3_A 77 FLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEK 156 (322)
T ss_dssp EEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHH
T ss_pred EEEEeeCCCCCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCCHHHHHHHHHH
Confidence 99999998888899999999999999999999999999996532 1111111100 0 0 002357899999999
Q ss_pred HHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccC--------C
Q 044053 161 SQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIY--------G 232 (327)
Q Consensus 161 l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~--------~ 232 (327)
|+++||||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+. +
T Consensus 157 l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~~~~~~~~~~ 235 (322)
T 1mi3_A 157 LVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGP-QSFVEMNQGRALN 235 (322)
T ss_dssp HHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-HHHHTTTCHHHHT
T ss_pred HHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCcHHHHHHHHHcCCEEEEECCCCC-CCccccccccccc
Confidence 999999999999999999999999999889999999999999999999999999999999999997 7332 1
Q ss_pred CCcccChHHHHHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccCCc
Q 044053 233 SNQVLENEALKEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSD 309 (327)
Q Consensus 233 ~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~ 309 (327)
.+..+..+.+.++|+++|+|++|+||+|++++|+++|||+++++|+++|+++++++||++|++.|+++..+.++.+.
T Consensus 236 ~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~ 312 (322)
T 1mi3_A 236 TPTLFAHDTIKAIAAKYNKTPAEVLLRWAAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKLDIGLRFNDP 312 (322)
T ss_dssp SCCTTSCHHHHHHHHHHTCCHHHHHHHHHHTTTCEECCCCCSHHHHHHTTSCCSSCCCHHHHHHHHTTCCCCCSSCT
T ss_pred CcccccCHHHHHHHHHcCCCHHHHHHHHHHhCCCEEEcCCCCHHHHHHHHhhcCCCcCHHHHHHHHhhcccCccCCc
Confidence 23345678999999999999999999999999999999999999999999999999999999999999877665443
No 19
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=2.4e-66 Score=470.48 Aligned_cols=265 Identities=39% Similarity=0.699 Sum_probs=239.1
Q ss_pred cccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcE
Q 044053 10 FNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQL 89 (327)
Q Consensus 10 ~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v 89 (327)
|+|+|++| +| | ++||+||||||+++ .+++.++|+.|++.|||+||||+.||+|+.||++|++. |+ +|+++
T Consensus 1 m~M~~~~l-~~-g-~~v~~lglGt~~~~--~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~~--~R~~~ 70 (278)
T 1hw6_A 1 MTVPSIVL-ND-G-NSIPQLGYGVFKVP--PADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS---GI--ARDDL 70 (278)
T ss_dssp -CCCEEEC-TT-S-CEEESBCEECCSCC--GGGHHHHHHHHHHHTCCEEECGGGTTCCHHHHHHHHHH---CC--CGGGC
T ss_pred CCCceEEC-CC-C-CccCCeeEECCcCC--hHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---CC--ChhhE
Confidence 35899999 66 9 99999999999964 57889999999999999999999999999999999975 65 79999
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccE
Q 044053 90 FITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKS 169 (327)
Q Consensus 90 ~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~ 169 (327)
||+||+|..+.+++.+++++++||+|||+||||+|++|||+... ....++|++|++|+++||||+
T Consensus 71 ~i~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~---------------~~~~e~~~al~~l~~~Gkir~ 135 (278)
T 1hw6_A 71 FITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAA---------------DNYVHAWEKMIELRAAGLTRS 135 (278)
T ss_dssp EEEEEECCC-----CHHHHHHHHHHHHTCSCEEEEEECCCCTTC---------------SSHHHHHHHHHHHHHTTSEEE
T ss_pred EEEEeeCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCC---------------CCHHHHHHHHHHHHHcCCccE
Confidence 99999998888899999999999999999999999999996521 237899999999999999999
Q ss_pred EEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHc
Q 044053 170 IGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAH 249 (327)
Q Consensus 170 iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~ 249 (327)
||||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |. ..++.++.+.++|+++
T Consensus 136 iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~----~~~~~~~~l~~ia~~~ 210 (278)
T 1hw6_A 136 IGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQ-GK----YDLFGAEPVTAAAAAH 210 (278)
T ss_dssp EEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GS----SCCTTSHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHhcCCCceeEEEEeCcccCCHHHHHHHHHcCCEEEEeccccC-CC----ccccccHHHHHHHHHh
Confidence 999999999999999998888999999999999999999999999999999999997 63 1245568999999999
Q ss_pred CCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCC
Q 044053 250 GKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHR 304 (327)
Q Consensus 250 ~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~ 304 (327)
|+|++|+||+|++++++++|+|+++++|+++|+++++++||++|++.|+++..+.
T Consensus 211 g~s~aqvaL~w~l~~~v~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~ 265 (278)
T 1hw6_A 211 GKTPAQAVLRWHLQKGFVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDPGD 265 (278)
T ss_dssp TCCHHHHHHHHHHHTTCBBCCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCC--
T ss_pred CCCHHHHHHHHHHHCCCEEEcCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999999999998764
No 20
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=5e-66 Score=468.70 Aligned_cols=265 Identities=41% Similarity=0.687 Sum_probs=245.6
Q ss_pred ccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCc
Q 044053 9 VFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQ 88 (327)
Q Consensus 9 ~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~ 88 (327)
+..|+|++| +| | ++||+||||||+++ +.+++.++|+.|++.|||+||||+.||+|+.||++|++. ++ +|++
T Consensus 6 ~~~m~~~~l-~~-g-~~v~~lglGt~~~~-~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~~--~R~~ 76 (281)
T 1vbj_A 6 MALTQSLKL-SN-G-VMMPVLGFGMWKLQ-DGNEAETATMWAIKSGYRHIDTAAIYKNEESAGRAIASC---GV--PREE 76 (281)
T ss_dssp TCCCCEEEC-TT-S-CEEESBCEECTTCC-TTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---SS--CGGG
T ss_pred CCCCceEEC-CC-C-CeecCeeEECCcCC-CHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhc---CC--ChhH
Confidence 446999999 56 9 99999999999975 557899999999999999999999999999999999964 54 7999
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc
Q 044053 89 LFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK 168 (327)
Q Consensus 89 v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir 168 (327)
+||+||++..+.+++.+++++++||+|||+||||+|++|||+ . ....++|++|++|+++||||
T Consensus 77 ~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~----------------~~~~~~~~al~~l~~~Gkir 139 (281)
T 1vbj_A 77 LFVTTKLWNSDQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-K----------------DKFIDTWKAFEKLYADKKVR 139 (281)
T ss_dssp CEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-S----------------SCHHHHHHHHHHHHHTTSBS
T ss_pred EEEEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-C----------------CCHHHHHHHHHHHHHCCCcc
Confidence 999999998888899999999999999999999999999996 2 13789999999999999999
Q ss_pred EEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHH
Q 044053 169 SIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKA 248 (327)
Q Consensus 169 ~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~ 248 (327)
+||||||++++++++++.++++|+++|++||++.++.+++++|+++||++++|+||++ |.+ +..+.+.++|++
T Consensus 140 ~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~------~~~~~l~~ia~~ 212 (281)
T 1vbj_A 140 AIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQKALCEYCKSKNIAVTAWSPLGQ-GHL------VEDARLKAIGGK 212 (281)
T ss_dssp CEEEESCCHHHHHHHHTSCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GTT------TTCHHHHHHHHT
T ss_pred EEEeeCCCHHHHHHHHHhCCCCceeeeEEeccccCCHHHHHHHHHcCCEEEEecCCcC-CCC------CCCHHHHHHHHH
Confidence 9999999999999999988889999999999999999999999999999999999997 743 346789999999
Q ss_pred cCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCcc
Q 044053 249 HGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 249 ~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 306 (327)
+|+|++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++..+.+.
T Consensus 213 ~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~ 270 (281)
T 1vbj_A 213 YGKTAAQVMLRWEIQAGVITIPKSGNEARIKENGNIFDFELTAEDIQVIDGMNAGHRY 270 (281)
T ss_dssp TTCCHHHHHHHHHHHTTCEECCBCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred hCCCHHHHHHHHHHHCCCEEecCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccCCc
Confidence 9999999999999999999999999999999999999999999999999999887554
No 21
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=2.2e-65 Score=466.48 Aligned_cols=271 Identities=36% Similarity=0.605 Sum_probs=244.9
Q ss_pred ccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEE
Q 044053 11 NVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLF 90 (327)
Q Consensus 11 ~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~ 90 (327)
.+++++|.+ | ++||+||||||+++. .+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|+++|
T Consensus 9 ~~~~~~l~~--g-~~v~~lglGt~~~~~-~~~~~~~v~~Al~~G~~~~DTA~~Yg~E~~vG~al~~~---~~--~R~~~~ 79 (288)
T 4f40_A 9 DKAMVTLSN--G-VKMPQFGLGVWQSPA-GEVTENAVKWALCAGYRHIDTAAIYKNEESVGAGLRAS---GV--PREDVF 79 (288)
T ss_dssp TTCEEECTT--S-CEEESBCEECTTCCT-THHHHHHHHHHHHTTCCEEECCGGGTCHHHHHHHHHHH---TC--CGGGCE
T ss_pred cCCeEECCC--C-CeecceeEECCcCCC-cHHHHHHHHHHHHcCCCeEECcccccCHHHHHHHHHhc---CC--ChhhEE
Confidence 357889976 9 999999999999763 57899999999999999999999999999999999976 65 799999
Q ss_pred EEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE
Q 044053 91 ITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI 170 (327)
Q Consensus 91 I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i 170 (327)
|+||++..+.+++.+++++++||+|||+||||+|++|||+...+.. .......++|++|++|+++||||+|
T Consensus 80 I~TK~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~---------~~~~~~~e~~~al~~l~~~Gkir~i 150 (288)
T 4f40_A 80 ITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILS---------KEGKKYLDSWRAFEQLYKEKKVRAI 150 (288)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHH---------HHCCHHHHHHHHHHHHHHTTSEEEE
T ss_pred EEEecCCCcCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccc---------cccccHHHHHHHHHHHHHcCCccEE
Confidence 9999998888999999999999999999999999999996421000 0012378999999999999999999
Q ss_pred EeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcC
Q 044053 171 GLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHG 250 (327)
Q Consensus 171 GvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~ 250 (327)
|||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+. ..+.+.++|+++|
T Consensus 151 GvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l~------~~~~l~~ia~~~g 223 (288)
T 4f40_A 151 GVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLRAFCDAKQIKVEAWSPLGQ-GKLL------SNPILSAIGAKYN 223 (288)
T ss_dssp EEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTC---CGG------GCHHHHHHHHHHT
T ss_pred EeccCCHHHHHHHHHhCCCCCeEEeccCccccCCHHHHHHHHHCCCEEEEecCCCC-Cccc------ccHHHHHHHHHhC
Confidence 99999999999999988889999999999999999999999999999999999997 7664 3578999999999
Q ss_pred CCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCcc
Q 044053 251 KTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 251 ~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 306 (327)
+|++|+||+|++++|+++|||+++++|+++|+++++++||++|++.|+++.++.++
T Consensus 224 ~t~aqvaL~w~l~~~~~~i~g~~~~~~l~en~~~~~~~L~~ee~~~i~~l~~~~r~ 279 (288)
T 4f40_A 224 KTAAQVILRWNIQKNLITIPKSVHRERIEENADIFDFELGAEDVMSIDALNTNSRY 279 (288)
T ss_dssp CCHHHHHHHHHHHTTCEECCBCSSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred CCHHHHHHHHHHhCCCeEeeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhccCCcc
Confidence 99999999999999999999999999999999999999999999999999987665
No 22
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=9.1e-65 Score=463.01 Aligned_cols=266 Identities=35% Similarity=0.650 Sum_probs=243.2
Q ss_pred ccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCc
Q 044053 9 VFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQ 88 (327)
Q Consensus 9 ~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~ 88 (327)
...|++++|+ | | ++||+||||||++ +.+++.++|+.|++.|||+||||+.||+|+.||++|++. ++ +|++
T Consensus 22 ~~~~~~~~L~-t-g-~~vs~lglGt~~~--~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~---~~--~R~~ 91 (296)
T 1mzr_A 22 LANPTVIKLQ-D-G-NVMPQLGLGVWQA--SNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNA---SV--NREE 91 (296)
T ss_dssp -CCCCEEECT-T-S-CEEESBCEECCSC--CHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---CS--CGGG
T ss_pred CCCCceEECC-C-C-CeeCCEeEECCCC--CHHHHHHHHHHHHHcCCCEEECCccccCHHHHHHHHHhc---CC--Cccc
Confidence 3478999995 5 9 9999999999995 478899999999999999999999999999999999974 54 7999
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc
Q 044053 89 LFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK 168 (327)
Q Consensus 89 v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir 168 (327)
+||+||++..+. +.+++++++||+|||+||||+|++|||+... ....++|++|++|+++||||
T Consensus 92 v~I~TK~~~~~~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~---------------~~~~e~~~al~~l~~~Gkir 154 (296)
T 1mzr_A 92 LFITTKLWNDDH--KRPREALLDSLKKLQLDYIDLYLMHWPVPAI---------------DHYVEAWKGMIELQKEGLIK 154 (296)
T ss_dssp CEEEEEECGGGT--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTT---------------CCHHHHHHHHHHHHHTTSEE
T ss_pred EEEEeccCCCcH--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCc---------------CCHHHHHHHHHHHHHCCCcC
Confidence 999999987654 8999999999999999999999999996521 23789999999999999999
Q ss_pred EEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHH
Q 044053 169 SIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKA 248 (327)
Q Consensus 169 ~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~ 248 (327)
+||||||++++++++++.++++|+++|++||++.++.+++++|+++||++++|+||++ |.+ ..+..+.+.++|++
T Consensus 155 ~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~~----~~l~~~~l~~ia~~ 229 (296)
T 1mzr_A 155 SIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQ-GGK----GVFDQKVIRDLADK 229 (296)
T ss_dssp EEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TCT----TTTTSHHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHhcCCCceEEeeecccccCCHHHHHHHHHCCCeEEEeccccC-Ccc----hhcChHHHHHHHHH
Confidence 9999999999999999988888999999999999999999999999999999999997 743 23456899999999
Q ss_pred cCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCcc
Q 044053 249 HGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 249 ~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 306 (327)
+|+|++|+||+|+++++++||||+++++|+++|+++++++||++|++.|+++....+.
T Consensus 230 ~g~s~aqvaL~w~l~~~v~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~~~ 287 (296)
T 1mzr_A 230 YGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRL 287 (296)
T ss_dssp HTCCHHHHHHHHHHHTTCEECCBCCCHHHHHHTTCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred hCCCHHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhhcCCc
Confidence 9999999999999999999999999999999999999999999999999999887553
No 23
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=1.4e-64 Score=469.14 Aligned_cols=290 Identities=38% Similarity=0.687 Sum_probs=256.4
Q ss_pred cCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEE
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFI 91 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I 91 (327)
.+++.|++ | ++||.||||||+ .+++++.++|++|+++|||+||||+.||||+.||++|++...++....|+++++
T Consensus 2 ~~~v~Lnt--G-~~vp~iGlGtw~--~~~~~a~~~i~~Al~~Gin~~DTA~~YgsE~~vG~al~~~~~~~~~~~r~~~~~ 76 (324)
T 4gac_A 2 ASSVLLHT--G-QKMPLIGLGTWK--SEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFV 76 (324)
T ss_dssp CCEEECTT--S-CEEESBCEECTT--CCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHBSTTSSBCGGGCEE
T ss_pred CCeEECCC--C-CEeccceeECCC--CCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhhhcccceeccccccc
Confidence 45778866 9 999999999998 578899999999999999999999999999999999998754432227999999
Q ss_pred EeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHcCCcc
Q 044053 92 TSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKE---DLLPMDYRGVWEAMEESQMLGLTK 168 (327)
Q Consensus 92 ~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~Gkir 168 (327)
++|.+..+.+++.+++++++||+|||+||||||++|||+....+....+...+ .......+++|++|++|+++||||
T Consensus 77 ~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir 156 (324)
T 4gac_A 77 TSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVK 156 (324)
T ss_dssp EEEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHHHHHHHHHHHHTTSBS
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHCCCee
Confidence 99999988999999999999999999999999999999765433222221111 112356899999999999999999
Q ss_pred EEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCC----CcccChHHHHH
Q 044053 169 SIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGS----NQVLENEALKE 244 (327)
Q Consensus 169 ~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~----~~~~~~~~l~~ 244 (327)
+||||||++++++++...+.+.+.++|++++++.++.+++++|+++||++++|+||++ |.+.+. +.....+.+.+
T Consensus 157 ~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spL~~-g~~~~~~~~~~~~~~~~~l~~ 235 (324)
T 4gac_A 157 ALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAYSPLGS-SDRAWRHPDEPVLLEEPVVLA 235 (324)
T ss_dssp CEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCC-GGGGGGSTTSCCGGGCHHHHH
T ss_pred EecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhHHHHHHHHHHhceeeeecCCccc-CccccCCCCCcchhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998 887643 23455689999
Q ss_pred HHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccC
Q 044053 245 IAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIP 307 (327)
Q Consensus 245 ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~ 307 (327)
+|+++|+|++|+||+|++++|+++|||+++++|++||++++++.||++|+++|+++.++.|+.
T Consensus 236 iA~~~g~t~aqvaL~w~l~~~~v~I~G~~~~~~l~eN~~a~~~~Ls~ee~~~id~l~~~~R~~ 298 (324)
T 4gac_A 236 LAEKHGRSPAQILLRWQVQRKVICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNKNWRYI 298 (324)
T ss_dssp HHHHHTCCHHHHHHHHHHHTTCEECCBCCCHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCCC
T ss_pred HHHHhCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHhhCCCCCCHHHHHHHhccCcCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999887653
No 24
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=9.4e-65 Score=470.76 Aligned_cols=273 Identities=27% Similarity=0.400 Sum_probs=242.9
Q ss_pred cccCeeecCCCCCCcccCcceeecc-ccC--CChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCC
Q 044053 10 FNVPKLKLSSSSGHLNMPVIGLGCA-VDK--SDTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLV 83 (327)
Q Consensus 10 ~~m~~~~Lg~t~g~~~vs~lglG~~-~~~--~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~ 83 (327)
|.|+||+||+| | ++||+|||||| .+| .+.+++.++|+.|+++|||+||||+.|| ||+.||++|++. ++
T Consensus 1 ~~m~yr~lG~t-g-~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~- 74 (327)
T 3eau_A 1 MLQFYRNLGKS-G-LRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---GW- 74 (327)
T ss_dssp CCCSEEESTTS-S-CEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---TC-
T ss_pred CcchhcccCCC-C-CcccceeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhc---CC-
Confidence 46999999999 9 99999999998 454 5778899999999999999999999997 699999999986 65
Q ss_pred CCCCcEEEEeccCCC-------CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 044053 84 SSREQLFITSKLWCQ-------NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWE 156 (327)
Q Consensus 84 ~~R~~v~I~tK~~~~-------~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (327)
+|+++||+||++.. +.+++.+++++++||+|||+||||+|++|||+... ..+++|+
T Consensus 75 -~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~----------------~~~e~~~ 137 (327)
T 3eau_A 75 -RRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNT----------------PMEETVR 137 (327)
T ss_dssp -CGGGCEEEEEESBCCSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTS----------------CHHHHHH
T ss_pred -ccCeEEEEEeecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCC----------------CHHHHHH
Confidence 79999999998532 34789999999999999999999999999997643 3889999
Q ss_pred HHHHHHHcCCccEEEeccccHHHHHHHHHhC----CCCCeeeecccCccccc---HHHHHHHHHcCCEEEEecCCCCCCc
Q 044053 157 AMEESQMLGLTKSIGLSNFSCKKIETILTFA----TIPPSINQVEMHPVWQQ---RKLIEFCKAKGIIVTAYSPLGAVGK 229 (327)
Q Consensus 157 ~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~----~~~~~~~q~~~~~~~~~---~~ll~~~~~~gi~v~a~~pl~~~G~ 229 (327)
+|++|+++||||+||||||++++++++++.+ .++|+++|++||++.++ .+++++|+++||++++|+||++ |+
T Consensus 138 al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~ 216 (327)
T 3eau_A 138 AMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLAC-GI 216 (327)
T ss_dssp HHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGG-GG
T ss_pred HHHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccC-ce
Confidence 9999999999999999999999999987754 26899999999999886 3689999999999999999998 99
Q ss_pred cCCCCcc-----------------------------cChHHHHHHHHHcCCCHHHHHHHHHHhcC--CEEeecCCCHHHH
Q 044053 230 IYGSNQV-----------------------------LENEALKEIAKAHGKTVAQVSLRWIVEQG--ATVVVKSLNLERM 278 (327)
Q Consensus 230 l~~~~~~-----------------------------~~~~~l~~ia~~~~~s~aq~al~w~l~~~--~~vi~g~~~~~~l 278 (327)
|+++... ...+.+.++|+++|+|++|+||+|++++| ++||||+++++|+
T Consensus 217 Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l 296 (327)
T 3eau_A 217 VSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQL 296 (327)
T ss_dssp GGTTTTTSCCTTSGGGSTTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHSSTTCCEEEECCSSHHHH
T ss_pred ecCcccCCCCCCcccccccccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCceEEeCCCCHHHH
Confidence 9764210 01267899999999999999999999996 4799999999999
Q ss_pred HHhhccccc--ccCHHHHHHHhcCCCCCcc
Q 044053 279 KQNLGIFDW--KLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 279 ~enl~a~~~--~L~~~~~~~l~~~~~~~~~ 306 (327)
++|++++++ +||++++++|+++.++.++
T Consensus 297 ~en~~a~~~~~~L~~e~~~~i~~~~~~~p~ 326 (327)
T 3eau_A 297 MENIGAIQVLPKLSSSIVHEIDSILGNKPY 326 (327)
T ss_dssp HHHHGGGGGGGGCCHHHHHHHHHHHCCCCC
T ss_pred HHHHHHhccCCCCCHHHHHHHHHHhhccCC
Confidence 999999998 9999999999999887654
No 25
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=2.7e-64 Score=464.43 Aligned_cols=266 Identities=41% Similarity=0.708 Sum_probs=247.1
Q ss_pred cCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhc-CCCCCCCcEE
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRL-GLVSSREQLF 90 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~-g~~~~R~~v~ 90 (327)
-.+++|++ | ++||.||||||+++ +.+++.++|+.|+++|||+||||+.||+|+.+|++|++.+.. ++ .|+++|
T Consensus 40 ~~~~TLn~--G-~~ip~lGlGt~~~~-d~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i--~r~~~~ 113 (314)
T 3b3d_A 40 QAKATLHN--G-VEMPWFGLGVFQVE-EGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGI--SREDLF 113 (314)
T ss_dssp TCEEECTT--S-CEEESBCEECCSCC-CSHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTC--CGGGCE
T ss_pred CCcEECCC--c-CcccceeEECCCCC-CHHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCC--Cccccc
Confidence 35788987 9 99999999999975 568899999999999999999999999999999999876544 44 899999
Q ss_pred EEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE
Q 044053 91 ITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI 170 (327)
Q Consensus 91 I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i 170 (327)
|+||++..+.+++.+++++++||+|||+||||||++|||+.. ...++|++|++|+++||||+|
T Consensus 114 i~~k~~~~~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~~-----------------~~~e~~~al~~l~~~Gkir~i 176 (314)
T 3b3d_A 114 ITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEG-----------------KYKEAWRALETLYKEGRIKAI 176 (314)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT-----------------THHHHHHHHHHHHHTTSEEEE
T ss_pred ccccCcCCCCCHHHHHHHHHHHHHHhCCCccccccccccccc-----------------chhHHHHHHHHHHHCCCEeEE
Confidence 999999999999999999999999999999999999999642 378999999999999999999
Q ss_pred EeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcC
Q 044053 171 GLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHG 250 (327)
Q Consensus 171 GvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~ 250 (327)
|||||+.++++++++.+.++|+++|+++++...+.+++++|+++||++++|+||++ |.|++ .+.+.++|+++|
T Consensus 177 GvSn~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~-G~L~~------~~~~~~ia~~~g 249 (314)
T 3b3d_A 177 GVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQ-GQLLD------HPVLADIAQTYN 249 (314)
T ss_dssp EEESCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTTTT------CHHHHHHHHHTT
T ss_pred EecCCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccC-CcccC------chhhHHHHHHcC
Confidence 99999999999999999999999999999998889999999999999999999998 88755 467889999999
Q ss_pred CCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCccC
Q 044053 251 KTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIP 307 (327)
Q Consensus 251 ~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~ 307 (327)
+|++|+||+|++++|+++|||+++++||+||+++++++||++|+++|+++.++.|+.
T Consensus 250 ~t~aqvaL~w~l~~~~v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~~ 306 (314)
T 3b3d_A 250 KSVAQIILRWDLQHGIITIPKSTKEHRIKENASVFDFELTQDDMNRIDALNENLRVG 306 (314)
T ss_dssp CCHHHHHHHHHHHTTCEECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCCS
T ss_pred CCHHHHHHHHHHhCCCEEEECCCCHHHHHHHHHhcCCCCCHHHHHHHhccCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999887763
No 26
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=2e-65 Score=476.76 Aligned_cols=274 Identities=23% Similarity=0.406 Sum_probs=238.6
Q ss_pred cCeeecCCCCCCcccCcceeeccccC------CChHHHHHHHHHHHHcCCCEEeCCCCcC----CHHHHHHHHHHHHhcC
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDK------SDTDALKLAVLEAIKLGYRHFDTAAMYG----TEKALGEAIAEALRLG 81 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~------~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg----sE~~lG~~L~~~~~~g 81 (327)
|+||+||+| | ++||+||||||+++ .+.+++.++|+.|+++|||+||||+.|| ||+.||++|++.
T Consensus 1 M~~~~lg~t-g-~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~---- 74 (337)
T 3v0s_A 1 MPRVKLGTQ-G-LEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQL---- 74 (337)
T ss_dssp CCEEECSSS-S-CEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTS----
T ss_pred CCeeecCCC-C-ceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhc----
Confidence 889999999 9 99999999999875 3678899999999999999999999998 899999999852
Q ss_pred CCCCCCcEEEEeccCCC---------CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHH
Q 044053 82 LVSSREQLFITSKLWCQ---------NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYR 152 (327)
Q Consensus 82 ~~~~R~~v~I~tK~~~~---------~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~ 152 (327)
+|+++||+||++.. +.+++.+++++++||+|||+||||+|++|||+... ..+
T Consensus 75 ---~R~~~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~----------------~~~ 135 (337)
T 3v0s_A 75 ---PREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTV----------------PIE 135 (337)
T ss_dssp ---CGGGCEEEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTS----------------CHH
T ss_pred ---CCcceEEEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCC----------------CHH
Confidence 79999999999754 46789999999999999999999999999997643 388
Q ss_pred HHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCccccc--HHHHHHHHHcCCEEEEecCCCCCCcc
Q 044053 153 GVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPLGAVGKI 230 (327)
Q Consensus 153 ~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~v~a~~pl~~~G~l 230 (327)
++|++|++|+++||||+||||||++++++++++.. +++++|++||++.++ .+++++|+++||++++|+||++ |+|
T Consensus 136 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~L 212 (337)
T 3v0s_A 136 ITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVH--PVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGR-GLF 212 (337)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHH-HHH
T ss_pred HHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhccC--CceEEEeeccccccchhHHHHHHHHHcCceEEEeccccC-ccc
Confidence 99999999999999999999999999999998875 567999999999987 6799999999999999999998 887
Q ss_pred CCCCc------------------------ccChHHHHHHHHHcCCCHHHHHHHHHHhcC--CEEeecCCCHHHHHHhhcc
Q 044053 231 YGSNQ------------------------VLENEALKEIAKAHGKTVAQVSLRWIVEQG--ATVVVKSLNLERMKQNLGI 284 (327)
Q Consensus 231 ~~~~~------------------------~~~~~~l~~ia~~~~~s~aq~al~w~l~~~--~~vi~g~~~~~~l~enl~a 284 (327)
+++.. ....+.+.++|+++|+|++|+||+|++++| ++||||+++++|+++|+++
T Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a 292 (337)
T 3v0s_A 213 WGKAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGA 292 (337)
T ss_dssp HHHHHHC-------------------------CHHHHHHHHHTTSCHHHHHHHHHHTTCTTBCCCCCCSCHHHHHHHHHG
T ss_pred CCCCCCCCCCCcchhhcccccchhhhhhHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCeEEEcCCCCHHHHHHHHHH
Confidence 64200 011268999999999999999999999999 7899999999999999999
Q ss_pred cccccCHHHHHHHhcCCCCCccCCccccC
Q 044053 285 FDWKLTDDDYDKINQIPQHRLIPSDFWVS 313 (327)
Q Consensus 285 ~~~~L~~~~~~~l~~~~~~~~~~~~~~~~ 313 (327)
++++||+++++.|+++....++.|.+|..
T Consensus 293 ~~~~L~~e~~~~l~~~~~~~~~~g~~~~~ 321 (337)
T 3v0s_A 293 LKVXLTKEDLKEISDAVPLDEVAGESIHE 321 (337)
T ss_dssp GGCCCCHHHHHHHHHTCC-----------
T ss_pred hccCCCHHHHHHHHHhhcccCCCCCCchH
Confidence 99999999999999999999999999876
No 27
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=4.7e-64 Score=458.73 Aligned_cols=264 Identities=39% Similarity=0.700 Sum_probs=242.5
Q ss_pred CeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEEE
Q 044053 13 PKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFIT 92 (327)
Q Consensus 13 ~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I~ 92 (327)
+.+.+|+| | ++||+||||||++ +.+++.++|+.|++.|||+||||+.||+|+.||++|++.++.+.. +|+++||+
T Consensus 15 ~~~~~~~t-g-~~v~~lglGt~~~--~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~-~R~~v~I~ 89 (298)
T 1vp5_A 15 VPKVTLNN-G-VEMPILGYGVFQI--PPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIV-RREELFVT 89 (298)
T ss_dssp CCEEECTT-S-CEEESBCEECTTC--CHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGGCEEE
T ss_pred CceEeCCC-C-CCccCeeEeCCcC--ChHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHhhhccCC-ChhhEEEE
Confidence 35667888 9 9999999999995 467899999999999999999999999999999999975544322 79999999
Q ss_pred eccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 044053 93 SKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL 172 (327)
Q Consensus 93 tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv 172 (327)
||++..+.+++.+++++++||+|||+||||+|++|||+. ...++|++|++|+++||||+|||
T Consensus 90 TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~------------------~~~e~~~al~~l~~~Gkir~iGv 151 (298)
T 1vp5_A 90 TKLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG------------------DVHCAWKAMEEMYKDGLVRAIGV 151 (298)
T ss_dssp EEECGGGCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS------------------CHHHHHHHHHHHHHTTSEEEEEE
T ss_pred eccCCCCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC------------------CHHHHHHHHHHHHHcCCccEEEe
Confidence 999887788999999999999999999999999999953 27899999999999999999999
Q ss_pred ccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcCCC
Q 044053 173 SNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHGKT 252 (327)
Q Consensus 173 S~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s 252 (327)
|||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |. ..++..+.+.++|+++|+|
T Consensus 152 Sn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~----~~~l~~~~l~~ia~~~g~s 226 (298)
T 1vp5_A 152 SNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAE-GR----KNIFQNGVLRSIAEKYGKT 226 (298)
T ss_dssp ESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GG----GGGGGCHHHHHHHHHHTCC
T ss_pred cCCCHHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHCCCEEEEeccccc-CC----ccccCcHHHHHHHHHhCCC
Confidence 999999999999999899999999999999999999999999999999999997 63 1234568999999999999
Q ss_pred HHHHHHHHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCC
Q 044053 253 VAQVSLRWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHR 304 (327)
Q Consensus 253 ~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~ 304 (327)
++|+||+|++++|+++|||+++++|+++|+++++++||+++++.|+++....
T Consensus 227 ~aqvaL~w~l~~~v~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 278 (298)
T 1vp5_A 227 VAQVILRWLTQKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQ 278 (298)
T ss_dssp HHHHHHHHHHHTTCEECCCCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999998764
No 28
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=2.1e-64 Score=469.07 Aligned_cols=289 Identities=36% Similarity=0.550 Sum_probs=245.0
Q ss_pred ccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhc---CCCCC
Q 044053 9 VFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRL---GLVSS 85 (327)
Q Consensus 9 ~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~---g~~~~ 85 (327)
+.+++..++|..+| .+||.||||||. .+.+++.++|+.|++.|||+||||+.||||+.||++|++.++. |+ +
T Consensus 9 ~~~~~~~~~~~~tg-~~vp~lGlGt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~vG~al~~~~~~~~~g~--~ 83 (334)
T 3krb_A 9 MGTLEAQTQGPGSM-QYPPRLGFGTWQ--APPEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSGI--K 83 (334)
T ss_dssp ------------CC-SSCCSBCEECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHCTTSSC--C
T ss_pred ccceecCCcCCCCC-CccCCeeeeCCC--CCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHhhhccCCC--C
Confidence 44667777776658 999999999999 5688999999999999999999999999999999999987766 65 8
Q ss_pred CCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCC--CCCCCCCCCCC---CCCCCCHHHHHHHHHH
Q 044053 86 REQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSK--PGEVGFPVPKE---DLLPMDYRGVWEAMEE 160 (327)
Q Consensus 86 R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~l~~ 160 (327)
|+++||+||++..+.+++.+++++++||+|||+||||+|++|||.... ++....|.+.+ ........++|++|++
T Consensus 84 R~~v~I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~ 163 (334)
T 3krb_A 84 REDVWITSKLWNYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQ 163 (334)
T ss_dssp GGGCEEEEEECGGGCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHH
T ss_pred hhhEEEEeeeCCCCCCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHH
Confidence 999999999998888999999999999999999999999999996643 11111111110 1112568999999999
Q ss_pred HHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCC-------
Q 044053 161 SQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGS------- 233 (327)
Q Consensus 161 l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~------- 233 (327)
|+++||||+||||||++++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |+|+++
T Consensus 164 l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~c~~~gI~v~ayspL~~-G~L~~~~~~~~~~ 242 (334)
T 3krb_A 164 LVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGG-SYADPRDPSGTQK 242 (334)
T ss_dssp HHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-SBC-------CCB
T ss_pred HHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCcccccHHHHHHHHHcCCEEEEEecCCC-CcccCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999998 988753
Q ss_pred CcccChHHHHHHHHHcCCCHHHHHH-----HHHHhcCCEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCC
Q 044053 234 NQVLENEALKEIAKAHGKTVAQVSL-----RWIVEQGATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHR 304 (327)
Q Consensus 234 ~~~~~~~~l~~ia~~~~~s~aq~al-----~w~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~ 304 (327)
+..+..+.+.++|+++|+|++|+|| +|+++ +++||||+++++|+++|+++++++||++|++.|+++.++.
T Consensus 243 ~~~~~~~~l~~iA~~~g~s~aqvaLaw~~~~w~l~-~~~vI~gs~~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~ 317 (334)
T 3krb_A 243 NVILECKTLKAIADAKGTSPHCVALAWHVKKWNTS-MYSVIPKSQTPARIEANFKCTEVQLSDDDMDAINNIHLNK 317 (334)
T ss_dssp CGGGGCHHHHHHHHHHTSCHHHHHHHHHHHHSCST-TEEECCBCSSHHHHHHHGGGGGCCCCHHHHHHHHHHHHHC
T ss_pred cchhccHHHHHHHHHhCcCHHHhHHhhHhhhhhcC-CeEEeeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhcCC
Confidence 2355678999999999999999999 77888 8899999999999999999999999999999999998765
No 29
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-64 Score=476.56 Aligned_cols=278 Identities=27% Similarity=0.415 Sum_probs=244.4
Q ss_pred cccCeeecCCCCCCcccCcceeecc-ccC--CChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCC
Q 044053 10 FNVPKLKLSSSSGHLNMPVIGLGCA-VDK--SDTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLV 83 (327)
Q Consensus 10 ~~m~~~~Lg~t~g~~~vs~lglG~~-~~~--~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~ 83 (327)
..| ||+||+| | ++||+|||||| .+| .+.+++.++|+.|+++|||+||||+.|| ||+.||++|++. ++
T Consensus 36 ~~m-yr~lG~t-g-~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~- 108 (367)
T 3lut_A 36 LQF-YRNLGKS-G-LRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---GW- 108 (367)
T ss_dssp CCS-EEESTTS-S-CEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---TC-
T ss_pred hhc-eeecCCC-C-CcccceeECCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhC---CC-
Confidence 358 9999999 9 99999999998 454 5778899999999999999999999997 599999999986 65
Q ss_pred CCCCcEEEEeccCCC-------CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 044053 84 SSREQLFITSKLWCQ-------NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWE 156 (327)
Q Consensus 84 ~~R~~v~I~tK~~~~-------~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (327)
+|+++||+||++.. +.+++.++++|++||+|||+||||+|++|||+... ..+++|+
T Consensus 109 -~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~----------------~~~e~~~ 171 (367)
T 3lut_A 109 -RRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNT----------------PMEETVR 171 (367)
T ss_dssp -CGGGCEEEEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTS----------------CHHHHHH
T ss_pred -CCceEEEEeccccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCC----------------CHHHHHH
Confidence 79999999998532 35689999999999999999999999999997643 3899999
Q ss_pred HHHHHHHcCCccEEEeccccHHHHHHHHHhC----CCCCeeeecccCcccccH---HHHHHHHHcCCEEEEecCCCCCCc
Q 044053 157 AMEESQMLGLTKSIGLSNFSCKKIETILTFA----TIPPSINQVEMHPVWQQR---KLIEFCKAKGIIVTAYSPLGAVGK 229 (327)
Q Consensus 157 ~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~----~~~~~~~q~~~~~~~~~~---~ll~~~~~~gi~v~a~~pl~~~G~ 229 (327)
+|++|+++||||+||||||++.++++++..+ .++|+++|++||+++++. +++++|+++||++++|+||++ |+
T Consensus 172 al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~ 250 (367)
T 3lut_A 172 AMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLAC-GI 250 (367)
T ss_dssp HHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGG-GG
T ss_pred HHHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEeccccc-cc
Confidence 9999999999999999999999999987754 378999999999999875 899999999999999999998 99
Q ss_pred cCCCCcc--------------------c---------ChHHHHHHHHHcCCCHHHHHHHHHHhcC--CEEeecCCCHHHH
Q 044053 230 IYGSNQV--------------------L---------ENEALKEIAKAHGKTVAQVSLRWIVEQG--ATVVVKSLNLERM 278 (327)
Q Consensus 230 l~~~~~~--------------------~---------~~~~l~~ia~~~~~s~aq~al~w~l~~~--~~vi~g~~~~~~l 278 (327)
|+++... + ..+.+.++|+++|+|++|+||+|+++++ ++||||+++++||
T Consensus 251 Ltgk~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l 330 (367)
T 3lut_A 251 VSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQL 330 (367)
T ss_dssp GGTTTTTSCCTTSGGGSTTCHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTSTTEEEEEECCSSHHHH
T ss_pred ccCCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEecCCCCHHHH
Confidence 9764210 0 1257899999999999999999999987 4799999999999
Q ss_pred HHhhccccc--ccCHHHHHHHhcCCCCCccCCcccc
Q 044053 279 KQNLGIFDW--KLTDDDYDKINQIPQHRLIPSDFWV 312 (327)
Q Consensus 279 ~enl~a~~~--~L~~~~~~~l~~~~~~~~~~~~~~~ 312 (327)
++|++++++ +|++++++.|+++.++.++++.+|-
T Consensus 331 ~en~~a~~~~~~Ls~e~~~~i~~~~~~~~~~~~~~~ 366 (367)
T 3lut_A 331 MENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYR 366 (367)
T ss_dssp HHHHTHHHHGGGCCHHHHHHHHHHHCCCCCC-----
T ss_pred HHHHHhhcccCCCCHHHHHHHHHHHhcCCCcccccC
Confidence 999999986 8999999999999999988887763
No 30
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=9.3e-65 Score=468.46 Aligned_cols=271 Identities=24% Similarity=0.325 Sum_probs=244.5
Q ss_pred cCeeecCCCCCCcccCcceeeccccC---CChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCC
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDK---SDTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSS 85 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~---~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~ 85 (327)
|+|++||+| | ++||+||||||+++ .+++++.++|+.|++.|||+||||+.|| ||+.||++|++. +. +
T Consensus 23 M~~~~Lg~~-~-~~vs~lglGt~~~g~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~--~ 95 (319)
T 1ur3_M 23 VQRITIAPQ-G-PEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLA---PH--L 95 (319)
T ss_dssp CCEEECSTT-C-CEEESSEEECTTTTTTTCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHC---GG--G
T ss_pred CceEECCCC-C-cccccccEeccccCCCCCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhC---CC--C
Confidence 899999998 8 99999999999986 4778899999999999999999999999 999999999973 33 6
Q ss_pred CCcEEEEeccCCC------------CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHH
Q 044053 86 REQLFITSKLWCQ------------NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRG 153 (327)
Q Consensus 86 R~~v~I~tK~~~~------------~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~ 153 (327)
|+++||+||++.. +.+++.+++++++||+|||+||||+|++|||+... ..++
T Consensus 96 R~~v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~----------------~~~e 159 (319)
T 1ur3_M 96 RERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLM----------------DADE 159 (319)
T ss_dssp TTTCEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTC----------------CHHH
T ss_pred CCeEEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCC----------------CHHH
Confidence 9999999999641 46789999999999999999999999999997532 3789
Q ss_pred HHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccH---HHHHHHHHcCCEEEEecCCCCCCcc
Q 044053 154 VWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQR---KLIEFCKAKGIIVTAYSPLGAVGKI 230 (327)
Q Consensus 154 ~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~---~ll~~~~~~gi~v~a~~pl~~~G~l 230 (327)
+|++|++|+++||||+||||||++++++++++.++.+|+++|++||+++++. +++++|+++||++++|+||++ |.|
T Consensus 160 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~-G~L 238 (319)
T 1ur3_M 160 VADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGG-GRL 238 (319)
T ss_dssp HHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTT-TCS
T ss_pred HHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccC-ccc
Confidence 9999999999999999999999999999999988888999999999999873 499999999999999999998 887
Q ss_pred CCCCc-ccChHHHHHHHHHcCCCH-HHHHHHHHHhcC--CEEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCCCcc
Q 044053 231 YGSNQ-VLENEALKEIAKAHGKTV-AQVSLRWIVEQG--ATVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 231 ~~~~~-~~~~~~l~~ia~~~~~s~-aq~al~w~l~~~--~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 306 (327)
+..+. ....+.+.++|+++|+|+ +|+||+|++++| ++||+|+++++|+++|+++++++||++|+++|+++.++.++
T Consensus 239 ~~~~~~~~~~~~l~~ia~~~g~t~~aqvaL~w~l~~~~~~~~I~G~~~~~~l~en~~a~~~~Ls~ee~~~l~~~~~~~~~ 318 (319)
T 1ur3_M 239 FNDDYFQPLRDELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYDV 318 (319)
T ss_dssp SSCGGGHHHHHHHHHHHHHTTCSCHHHHHHHHHHTSTTCCEEEECCSCHHHHHHHHGGGGCCCCHHHHHHHHHHHHSSCC
T ss_pred cCCchhHHHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHhcCCCC
Confidence 54211 112478999999999999 999999999997 69999999999999999999999999999999998776554
No 31
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=1.3e-64 Score=473.09 Aligned_cols=277 Identities=20% Similarity=0.373 Sum_probs=245.9
Q ss_pred ccccCeeecCCCCCCcccCcceeeccccC------CChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHh
Q 044053 9 VFNVPKLKLSSSSGHLNMPVIGLGCAVDK------SDTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALR 79 (327)
Q Consensus 9 ~~~m~~~~Lg~t~g~~~vs~lglG~~~~~------~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~ 79 (327)
+|.|+|++||+| | ++||+||||||+++ .+.+++.++|+.|+++|||+||||+.|| ||+.||++|+.
T Consensus 16 ~m~M~~~~lg~t-g-~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~--- 90 (348)
T 3n2t_A 16 HMASDTIRIPGI-D-TPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE--- 90 (348)
T ss_dssp -CTTSEECCTTC-S-SCEESEEEECTTSSCSSSCSTTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH---
T ss_pred CCCceeeecCCC-C-CccCCEeEeCccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh---
Confidence 446999999999 9 99999999999976 3578899999999999999999999998 99999999983
Q ss_pred cCCCCCCCcEEEEeccCC-----C--------CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCC
Q 044053 80 LGLVSSREQLFITSKLWC-----Q--------NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDL 146 (327)
Q Consensus 80 ~g~~~~R~~v~I~tK~~~-----~--------~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~ 146 (327)
.|+++||+||++. . +.+++.+++++++||+|||+||||+|++|||+...
T Consensus 91 -----~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~------------- 152 (348)
T 3n2t_A 91 -----KPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKT------------- 152 (348)
T ss_dssp -----SCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTS-------------
T ss_pred -----CCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCC-------------
Confidence 7999999999932 1 25789999999999999999999999999997643
Q ss_pred CCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCccccc--HHHHHHHHHcCCEEEEecCC
Q 044053 147 LPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 147 ~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~v~a~~pl 224 (327)
..+++|++|++|+++||||+||||||++++++++++.+ +|+++|++||+++++ .+++++|+++||++++|+||
T Consensus 153 ---~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL 227 (348)
T 3n2t_A 153 ---PIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVA--PLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGAL 227 (348)
T ss_dssp ---CHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTT
T ss_pred ---CHHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHhC--CccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecc
Confidence 38999999999999999999999999999999999987 678999999999986 68999999999999999999
Q ss_pred CCCCccCCCCcc---------------cC----------hHHHHHHHHHcCCCHHHHHHHHHHhcCC-EEeecCCCHHHH
Q 044053 225 GAVGKIYGSNQV---------------LE----------NEALKEIAKAHGKTVAQVSLRWIVEQGA-TVVVKSLNLERM 278 (327)
Q Consensus 225 ~~~G~l~~~~~~---------------~~----------~~~l~~ia~~~~~s~aq~al~w~l~~~~-~vi~g~~~~~~l 278 (327)
++ |+|+++... +. .+.+.++|+++|+|++|+||+|++++++ ++|+|+++++||
T Consensus 228 ~~-G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~v~~~I~g~~~~~~l 306 (348)
T 3n2t_A 228 CR-GLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQGPVIALWGARKPGQV 306 (348)
T ss_dssp GG-GGGGTCCCTTCCCCTTSGGGGCGGGSTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTTTTEEEEEECSSGGGG
T ss_pred cC-ccccCCccCCCCCCCcchhhcccccchhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHCCCcEEEeCCCCHHHH
Confidence 98 998764210 11 1589999999999999999999999984 999999999999
Q ss_pred HHhhcccccccCHHHHHHHhcCCCCC--ccCCccccCC
Q 044053 279 KQNLGIFDWKLTDDDYDKINQIPQHR--LIPSDFWVSP 314 (327)
Q Consensus 279 ~enl~a~~~~L~~~~~~~l~~~~~~~--~~~~~~~~~~ 314 (327)
++|+++++++|++++++.|+++.... ...|.+|..|
T Consensus 307 ~enl~a~~~~L~~e~~~~l~~~~~~~~~~~~g~~~~~~ 344 (348)
T 3n2t_A 307 SGVKDVFGWSLTDEEKKAVDDILARHVPNPIDPTFMAP 344 (348)
T ss_dssp TTHHHHSSCCCCHHHHHHHHHHHHHHSCCCCCSSCCC-
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhccCCCCccccCC
Confidence 99999999999999999999998754 3445555544
No 32
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=1.1e-64 Score=470.96 Aligned_cols=273 Identities=25% Similarity=0.381 Sum_probs=247.1
Q ss_pred cCeeecCCCCCCcccCcceeeccccCC------ChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCC
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDKS------DTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGL 82 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~~------~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~ 82 (327)
|+|++||+| | ++||+||||||+++. +.+++.++|+.|+++|||+||||+.|| ||+.||++|++. |
T Consensus 1 M~~~~lg~t-g-~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~- 74 (333)
T 1pz1_A 1 MEYTSIADT-G-IEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEY---M- 74 (333)
T ss_dssp CCEEECTTS-S-CEEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHH---T-
T ss_pred CCceecCCC-C-CcccCEeEechhhcCCcCCCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcC---C-
Confidence 789999998 9 999999999999862 578899999999999999999999999 999999999975 5
Q ss_pred CCCCCcEEEEeccC---CC-----CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHH
Q 044053 83 VSSREQLFITSKLW---CQ-----NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGV 154 (327)
Q Consensus 83 ~~~R~~v~I~tK~~---~~-----~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (327)
.|+++||+||++ .. +.+++.+++++++||+|||+||||+|++|||+... ..+++
T Consensus 75 --~R~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~----------------~~~e~ 136 (333)
T 1pz1_A 75 --KRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLV----------------PIEET 136 (333)
T ss_dssp --CGGGCEEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTS----------------CHHHH
T ss_pred --CcCeEEEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCC----------------CHHHH
Confidence 699999999996 21 46789999999999999999999999999997532 37899
Q ss_pred HHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCccccc--HHHHHHHHHcCCEEEEecCCCCCCccCC
Q 044053 155 WEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPLGAVGKIYG 232 (327)
Q Consensus 155 ~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~v~a~~pl~~~G~l~~ 232 (327)
|++|++|+++||||+||||||++++++++++. .+|+++|++||+++++ .+++++|+++||++++|+||++ |+|++
T Consensus 137 ~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg 213 (333)
T 1pz1_A 137 AEVMKELYDAGKIRAIGVSNFSIEQMDTFRAV--APLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCR-GLLTG 213 (333)
T ss_dssp HHHHHHHHHTTSBSCEEECSCCHHHHHHHHTT--SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGG-GTTSS
T ss_pred HHHHHHHHHCCcCCEEEecCCCHHHHHHHHhc--CCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccC-CccCC
Confidence 99999999999999999999999999999986 5789999999999987 6899999999999999999998 99876
Q ss_pred CCc---------------ccCh----------HHHHHHHHHcCC-CHHHHHHHHHHhcC--CEEeecCCCHHHHHHhhcc
Q 044053 233 SNQ---------------VLEN----------EALKEIAKAHGK-TVAQVSLRWIVEQG--ATVVVKSLNLERMKQNLGI 284 (327)
Q Consensus 233 ~~~---------------~~~~----------~~l~~ia~~~~~-s~aq~al~w~l~~~--~~vi~g~~~~~~l~enl~a 284 (327)
+.. .+.. +.+.++|+++|+ |++|+||+|++++| ++||+|+++++|+++|+++
T Consensus 214 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a 293 (333)
T 1pz1_A 214 KMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWGARKPGQLEALSEI 293 (333)
T ss_dssp CCCTTCCCCTTCGGGSCGGGSTTTHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTSTTCCEEEEECCSGGGGTTCTTS
T ss_pred CccccccCCCccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 421 1222 789999999999 99999999999999 7999999999999999999
Q ss_pred cccccCHHHHHHHhcCCCCC--ccCCccc
Q 044053 285 FDWKLTDDDYDKINQIPQHR--LIPSDFW 311 (327)
Q Consensus 285 ~~~~L~~~~~~~l~~~~~~~--~~~~~~~ 311 (327)
++++||+++++.|+++.... .+.|.+|
T Consensus 294 ~~~~L~~e~~~~l~~~~~~~~~~~~g~~~ 322 (333)
T 1pz1_A 294 TGWTLNSEDQKDINTILENTISDPVGPEF 322 (333)
T ss_dssp SSCCCCHHHHHHHHHHHHHHCSSCCCSGG
T ss_pred cCCCCCHHHHHHHHHHHhhcccCCccccc
Confidence 99999999999999988766 6677776
No 33
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=1.7e-64 Score=466.13 Aligned_cols=263 Identities=25% Similarity=0.387 Sum_probs=236.6
Q ss_pred cCeeecCCCCCCcccCcceeeccccC-------CChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcC
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDK-------SDTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLG 81 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~-------~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g 81 (327)
|+|++||+| | ++||+||||||+++ .+++++.++|+.|+++|||+||||+.|| ||+.||++|+..
T Consensus 1 M~~~~lg~t-g-~~vs~lglGt~~~g~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---- 74 (312)
T 1pyf_A 1 MKKAKLGKS-D-LQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREF---- 74 (312)
T ss_dssp -CCEECTTS-C-CEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTS----
T ss_pred CCeeecCCC-C-CcccCEeEeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhc----
Confidence 789999998 9 99999999999987 3578899999999999999999999999 899999999842
Q ss_pred CCCCCCcEEEEeccC--C------CCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHH
Q 044053 82 LVSSREQLFITSKLW--C------QNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRG 153 (327)
Q Consensus 82 ~~~~R~~v~I~tK~~--~------~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~ 153 (327)
+|+++||+||++ + .+.+++.+++++++||+|||+||||+|++|||+... ..++
T Consensus 75 ---~R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~----------------~~~e 135 (312)
T 1pyf_A 75 ---NREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT----------------PKDE 135 (312)
T ss_dssp ---CGGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSS----------------CHHH
T ss_pred ---CCCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCC----------------CHHH
Confidence 699999999963 3 357899999999999999999999999999996532 3899
Q ss_pred HHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccH--HHHHHHHHcCCEEEEecCCCCCCccC
Q 044053 154 VWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQR--KLIEFCKAKGIIVTAYSPLGAVGKIY 231 (327)
Q Consensus 154 ~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~--~ll~~~~~~gi~v~a~~pl~~~G~l~ 231 (327)
+|++|++|+++||||+||||||++++++++++.. +|+++|++||+++++. +++++|+++||++++|+||++ |+|+
T Consensus 136 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~L~ 212 (312)
T 1pyf_A 136 AVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDG--LVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVS-GLLA 212 (312)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTTS--CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTT-TGGG
T ss_pred HHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhhC--CceEEeccCCccccchHHHHHHHHHHcCCeEEEeccccc-cccc
Confidence 9999999999999999999999999999998754 6889999999999874 599999999999999999998 9887
Q ss_pred CCCc---cc----------------------ChHHHHHHHHHcCCCHHHHHHHHHHhcC--CEEeecCCCHHHHHHhhcc
Q 044053 232 GSNQ---VL----------------------ENEALKEIAKAHGKTVAQVSLRWIVEQG--ATVVVKSLNLERMKQNLGI 284 (327)
Q Consensus 232 ~~~~---~~----------------------~~~~l~~ia~~~~~s~aq~al~w~l~~~--~~vi~g~~~~~~l~enl~a 284 (327)
++.. .+ ..+.+.++|+++|+|++|+||+|++++| ++||+|+++++|+++|+++
T Consensus 213 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a 292 (312)
T 1pyf_A 213 GKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKT 292 (312)
T ss_dssp TCCCTTCCCCTTCGGGGSGGGSHHHHHHHHHHHHTTHHHHHHTTSCHHHHHHHHHHHSTTCCCBCCCCSSHHHHHHHHGG
T ss_pred CCCCCCCCCCCcccccccccccchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHhh
Confidence 6421 00 1256889999999999999999999999 7899999999999999999
Q ss_pred cccccCHHHHHHHhcCCC
Q 044053 285 FDWKLTDDDYDKINQIPQ 302 (327)
Q Consensus 285 ~~~~L~~~~~~~l~~~~~ 302 (327)
++++||+++++.|+++..
T Consensus 293 ~~~~L~~~~~~~l~~~~~ 310 (312)
T 1pyf_A 293 ADVTLSQEDISFIDKLFA 310 (312)
T ss_dssp GGCCCCHHHHHHHHHHTC
T ss_pred ccCCCCHHHHHHHHHHhc
Confidence 999999999999998764
No 34
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=1.7e-63 Score=466.53 Aligned_cols=272 Identities=22% Similarity=0.395 Sum_probs=238.9
Q ss_pred ccccccCeeecCCCCCCcccCcceeecc-ccC--CChHHHHHHHHHHHHcCCCEEeCCCCcCC-----HHHHHHHHHHHH
Q 044053 7 STVFNVPKLKLSSSSGHLNMPVIGLGCA-VDK--SDTDALKLAVLEAIKLGYRHFDTAAMYGT-----EKALGEAIAEAL 78 (327)
Q Consensus 7 ~~~~~m~~~~Lg~t~g~~~vs~lglG~~-~~~--~~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs-----E~~lG~~L~~~~ 78 (327)
.....|+||+||+| | ++||+|||||| .+| .+.+++.++|+.|++.|||+||||+.||+ |+.||++|++.+
T Consensus 29 ~~~~~M~~r~lg~t-g-~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~ 106 (353)
T 3erp_A 29 NRYHTMEYRRCGRS-G-VKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDF 106 (353)
T ss_dssp TTTTSCCEEECSSS-S-CEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHT
T ss_pred CccccceeeecCCC-C-CccCCeeecChhhcCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhc
Confidence 34456999999999 9 99999999998 565 57889999999999999999999999986 999999998631
Q ss_pred hcCCCCCCCcEEEEeccCCC--------CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCC
Q 044053 79 RLGLVSSREQLFITSKLWCQ--------NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMD 150 (327)
Q Consensus 79 ~~g~~~~R~~v~I~tK~~~~--------~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~ 150 (327)
. + .|+++||+||++.. ..+++.++++|++||+|||+||||+|++|||+... .
T Consensus 107 ~-~---~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~----------------~ 166 (353)
T 3erp_A 107 L-P---WRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPET----------------P 166 (353)
T ss_dssp G-G---GGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTS----------------C
T ss_pred c-C---CCCeEEEEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCC----------------C
Confidence 1 1 49999999998432 13689999999999999999999999999997643 3
Q ss_pred HHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhC---CCCCeeeecccCccccc--HHHHHHHHHcCCEEEEecCCC
Q 044053 151 YRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFA---TIPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 151 ~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~---~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~v~a~~pl~ 225 (327)
.+++|++|++|+++||||+||||||++++++++++.+ +++|+++|++||++++. .+++++|+++||++++|+||+
T Consensus 167 ~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~ 246 (353)
T 3erp_A 167 LKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLA 246 (353)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTG
T ss_pred HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEecccc
Confidence 8999999999999999999999999999999987754 37899999999999885 579999999999999999999
Q ss_pred CCCccCCCCc--------------ccC-----------hHHHHHHHHHcCCCHHHHHHHHHHhcC--CEEeecCCCHHHH
Q 044053 226 AVGKIYGSNQ--------------VLE-----------NEALKEIAKAHGKTVAQVSLRWIVEQG--ATVVVKSLNLERM 278 (327)
Q Consensus 226 ~~G~l~~~~~--------------~~~-----------~~~l~~ia~~~~~s~aq~al~w~l~~~--~~vi~g~~~~~~l 278 (327)
+ |+|+++.. .+. .+.+.++|+++|+|++|+||+|++++| ++||||+++++|+
T Consensus 247 ~-G~Ltg~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~G~~~~~~l 325 (353)
T 3erp_A 247 G-GQLTDRYLNGIPEDSRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQI 325 (353)
T ss_dssp G-GTSSGGGTC-------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTSCCCEEEECCSSHHHH
T ss_pred c-cccCCCccCCCCCcccccccccccccccccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEEeCCCCHHHH
Confidence 8 99875310 011 138999999999999999999999999 5799999999999
Q ss_pred HHhhccc-ccccCHHHHHHHhcCC
Q 044053 279 KQNLGIF-DWKLTDDDYDKINQIP 301 (327)
Q Consensus 279 ~enl~a~-~~~L~~~~~~~l~~~~ 301 (327)
++|++++ +++||++|++.|+++.
T Consensus 326 ~enl~a~~~~~Ls~ee~~~i~~~~ 349 (353)
T 3erp_A 326 EDAVGMLANRRFSAAECAEIDAIL 349 (353)
T ss_dssp HHHHHGGGGCCCCHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCHHHHHHHHHHH
Confidence 9999999 7899999999999875
No 35
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=5.4e-63 Score=462.23 Aligned_cols=275 Identities=22% Similarity=0.382 Sum_probs=239.8
Q ss_pred cccccccCeeecCCCCCCcccCcceeeccc-cC--CChHHHHHHHHHHHHcCCCEEeCCCCcCC-----HHHHHHHHHHH
Q 044053 6 QSTVFNVPKLKLSSSSGHLNMPVIGLGCAV-DK--SDTDALKLAVLEAIKLGYRHFDTAAMYGT-----EKALGEAIAEA 77 (327)
Q Consensus 6 ~~~~~~m~~~~Lg~t~g~~~vs~lglG~~~-~~--~~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs-----E~~lG~~L~~~ 77 (327)
+.....|+||+||+| | ++||+||||||. ++ .+.+++.++|+.|++.|||+||||+.||+ |+.||++|++.
T Consensus 7 ~~~~~~M~~r~lg~t-g-~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~ 84 (346)
T 3n6q_A 7 PERYGQMQYRYCGKS-G-LRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLRED 84 (346)
T ss_dssp TTTTSSCCEEECTTS-S-CEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHH
T ss_pred CCcccCceeEecCCC-C-CeecCeeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhh
Confidence 344456999999999 9 999999999985 44 46788999999999999999999999996 99999999975
Q ss_pred HhcCCCCCCCcEEEEeccCC----C----CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCC
Q 044053 78 LRLGLVSSREQLFITSKLWC----Q----NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPM 149 (327)
Q Consensus 78 ~~~g~~~~R~~v~I~tK~~~----~----~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~ 149 (327)
+.. .|+++||+||++. . +.+++.++++|++||+|||+||||+|++|||+...
T Consensus 85 ---~~~-~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~---------------- 144 (346)
T 3n6q_A 85 ---FAA-YRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENT---------------- 144 (346)
T ss_dssp ---CTT-TGGGCEEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTS----------------
T ss_pred ---ccc-ccccEEEEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCC----------------
Confidence 331 4999999999632 1 22789999999999999999999999999997643
Q ss_pred CHHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHh---CCCCCeeeecccCccccc--H-HHHHHHHHcCCEEEEecC
Q 044053 150 DYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTF---ATIPPSINQVEMHPVWQQ--R-KLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 150 ~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~---~~~~~~~~q~~~~~~~~~--~-~ll~~~~~~gi~v~a~~p 223 (327)
..+++|++|++|+++||||+||||||++++++++++. .+++++++|++||+++++ . +++++|+++||++++|+|
T Consensus 145 ~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~sp 224 (346)
T 3n6q_A 145 PMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTP 224 (346)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBST
T ss_pred CHHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEecc
Confidence 3899999999999999999999999999999887654 447889999999999986 3 699999999999999999
Q ss_pred CCCCCccCCCCcc-----------------cCh-----------HHHHHHHHHcCCCHHHHHHHHHHhcC--CEEeecCC
Q 044053 224 LGAVGKIYGSNQV-----------------LEN-----------EALKEIAKAHGKTVAQVSLRWIVEQG--ATVVVKSL 273 (327)
Q Consensus 224 l~~~G~l~~~~~~-----------------~~~-----------~~l~~ia~~~~~s~aq~al~w~l~~~--~~vi~g~~ 273 (327)
|++ |+|+++... +.. +.+.++|+++|+|++|+||+|++++| ++||||++
T Consensus 225 L~~-G~L~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~~I~g~~ 303 (346)
T 3n6q_A 225 LAQ-GLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGAS 303 (346)
T ss_dssp TGG-GGGGTSCC-----------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSSTTCSEEEECCS
T ss_pred ccC-eecCCCccCCCCCccccccccccccccchhhhhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCcEEEcCCC
Confidence 998 998764100 111 38999999999999999999999999 78999999
Q ss_pred CHHHHHHhhccc-ccccCHHHHHHHhcCCCC
Q 044053 274 NLERMKQNLGIF-DWKLTDDDYDKINQIPQH 303 (327)
Q Consensus 274 ~~~~l~enl~a~-~~~L~~~~~~~l~~~~~~ 303 (327)
+++||++|++++ +++||+++++.|+++.+.
T Consensus 304 ~~~~l~en~~a~~~~~Ls~e~~~~i~~~~~~ 334 (346)
T 3n6q_A 304 RAEQLEENVQALNNLTFSTKELAQIDQHIAD 334 (346)
T ss_dssp SHHHHHHHHGGGGCCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhccCCCCCHHHHHHHHHHHhc
Confidence 999999999997 689999999999998764
No 36
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=3.8e-63 Score=463.41 Aligned_cols=282 Identities=27% Similarity=0.380 Sum_probs=239.9
Q ss_pred cCeeecCCCCCCcccCcceeeccccC--CChHHHHHHHHHHHHcCCCEEeCCCCc---------C-CHHHHHHHHHHHHh
Q 044053 12 VPKLKLSSSSGHLNMPVIGLGCAVDK--SDTDALKLAVLEAIKLGYRHFDTAAMY---------G-TEKALGEAIAEALR 79 (327)
Q Consensus 12 m~~~~Lg~t~g~~~vs~lglG~~~~~--~~~~~~~~~l~~A~~~Gi~~~DTA~~Y---------g-sE~~lG~~L~~~~~ 79 (327)
|+|++||+| | ++||+||||||.|+ .+.+++.++|+.|+++|||+||||+.| | ||+.||++|++.
T Consensus 1 M~~~~lg~t-g-~~vs~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~-- 76 (346)
T 1lqa_A 1 MQYHRIPHS-S-LEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH-- 76 (346)
T ss_dssp CCEEECTTS-S-CEEESEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH--
T ss_pred CCeeecCCC-C-CeecCeeEEccccCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc--
Confidence 789999998 9 99999999999887 467889999999999999999999999 3 899999999975
Q ss_pred cCCCCCCCcEEEEeccCCC------------CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCC--CCCCCCCCCC
Q 044053 80 LGLVSSREQLFITSKLWCQ------------NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPG--EVGFPVPKED 145 (327)
Q Consensus 80 ~g~~~~R~~v~I~tK~~~~------------~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~--~~~~~~~~~~ 145 (327)
+ +|+++||+||++.. +.+++.+++++++||+|||+||||+|++|||....+. ...++.. +.
T Consensus 77 -~---~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~-d~ 151 (346)
T 1lqa_A 77 -G---SREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWT-DS 151 (346)
T ss_dssp -C---CGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCC-SS
T ss_pred -C---CCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCcccccccccccccccc-cc
Confidence 5 79999999999642 2578999999999999999999999999999543210 0000000 00
Q ss_pred CCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhC---C-CCCeeeecccCccccc--HHHHHHHHHcCCEEE
Q 044053 146 LLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFA---T-IPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVT 219 (327)
Q Consensus 146 ~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~---~-~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~v~ 219 (327)
......+++|++|++|+++||||+||||||+.++++++++.+ + .+|+++|++||+++++ .+++++|+++||+++
T Consensus 152 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~ 231 (346)
T 1lqa_A 152 APAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELL 231 (346)
T ss_dssp CCSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEE
T ss_pred ccCCCHHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEE
Confidence 002357899999999999999999999999999988877654 2 4689999999999986 689999999999999
Q ss_pred EecCCCCCCccCCCCcc-----------------cCh-------HHHHHHHHHcCCCHHHHHHHHHHhcC--CEEeecCC
Q 044053 220 AYSPLGAVGKIYGSNQV-----------------LEN-------EALKEIAKAHGKTVAQVSLRWIVEQG--ATVVVKSL 273 (327)
Q Consensus 220 a~~pl~~~G~l~~~~~~-----------------~~~-------~~l~~ia~~~~~s~aq~al~w~l~~~--~~vi~g~~ 273 (327)
+|+||++ |+|+++... ... +.+.++|+++|+|++|+||+|++++| ++||+|++
T Consensus 232 a~spL~~-G~L~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~ 310 (346)
T 1lqa_A 232 AYSCLGF-GTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGAT 310 (346)
T ss_dssp EECTTGG-GGGGTTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEECCS
T ss_pred Eecchhh-hhhcCccccccCCCcchhhcchhhcccccHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeCCC
Confidence 9999998 998764100 011 37899999999999999999999999 47999999
Q ss_pred CHHHHHHhhcccccccCHHHHHHHhcCCCC
Q 044053 274 NLERMKQNLGIFDWKLTDDDYDKINQIPQH 303 (327)
Q Consensus 274 ~~~~l~enl~a~~~~L~~~~~~~l~~~~~~ 303 (327)
+++||++|+++++++||+++++.|+++...
T Consensus 311 ~~~~l~enl~a~~~~L~~e~~~~l~~~~~~ 340 (346)
T 1lqa_A 311 TMDQLKTNIESLHLELSEDVLAEIEAVHQV 340 (346)
T ss_dssp SHHHHHHHHGGGGCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhccCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999988654
No 37
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=2.4e-63 Score=458.86 Aligned_cols=267 Identities=20% Similarity=0.335 Sum_probs=235.3
Q ss_pred ccccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCC
Q 044053 9 VFNVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSS 85 (327)
Q Consensus 9 ~~~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~ 85 (327)
...|+|++||+| | ++||+||||||+++.+.+++.++|+.|++.|||+||||+.|| ||+.||++|+. +
T Consensus 18 ~~~M~~r~lg~t-g-~~vs~lglGt~~~g~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~--------~ 87 (317)
T 1ynp_A 18 GSHMKKRQLGTS-D-LHVSELGFGCMSLGTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG--------R 87 (317)
T ss_dssp --CCCEEECTTS-S-CEEESBCBCSCCCCSCHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT--------C
T ss_pred cCCcceeecCCC-C-CcccCEeEcCcccCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc--------C
Confidence 446999999999 9 999999999999876668899999999999999999999998 99999999983 7
Q ss_pred CCcEEEEeccCCC----------CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 044053 86 REQLFITSKLWCQ----------NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVW 155 (327)
Q Consensus 86 R~~v~I~tK~~~~----------~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (327)
|+++||+||++.. +.+++.+++++++||+|||+||||+|++|||+... ..+++|
T Consensus 88 R~~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~----------------~~~e~~ 151 (317)
T 1ynp_A 88 RQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDD----------------PIDETI 151 (317)
T ss_dssp GGGCEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTS----------------CHHHHH
T ss_pred CCeEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCC----------------ChHHHH
Confidence 9999999999642 46789999999999999999999999999997532 378999
Q ss_pred HHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccH-HHHHHHHHcCCEEEEecCCCCCCccCCCC
Q 044053 156 EAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQR-KLIEFCKAKGIIVTAYSPLGAVGKIYGSN 234 (327)
Q Consensus 156 ~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~-~ll~~~~~~gi~v~a~~pl~~~G~l~~~~ 234 (327)
++|++|+++||||+||||||++++++++++.+. ++++|++||++.++. .++++|+++||++++|+||++ |.|+++.
T Consensus 152 ~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~--~~~~Q~~~nl~~~~~e~l~~~~~~~gI~v~a~spL~~-G~L~~~~ 228 (317)
T 1ynp_A 152 EAFEELKQEGVIRYYGISSIRPNVIKEYLKRSN--IVSIMMQYSILDRRPEEWFPLIQEHGVSVVVRGPVAR-GLLSRRP 228 (317)
T ss_dssp HHHHHHHHHTSEEEEEEECCCHHHHHHHHHHSC--CCEEEEECBTTBCGGGGGHHHHHHTTCEEEEECTTGG-GTTSSSC
T ss_pred HHHHHHHhCCceEEEEecCCCHHHHHHHHhcCC--CEEEeccCCchhCCHHHHHHHHHHcCCeEEEecCccC-cccCCCC
Confidence 999999999999999999999999999999864 679999999999874 399999999999999999998 9887640
Q ss_pred -----ccc------ChHHHHHHHHHcCCCHHHHHHHHHHhcC--CEEeecCCCHHHHHHhhcccc-cccCHHHHHHHhcC
Q 044053 235 -----QVL------ENEALKEIAKAHGKTVAQVSLRWIVEQG--ATVVVKSLNLERMKQNLGIFD-WKLTDDDYDKINQI 300 (327)
Q Consensus 235 -----~~~------~~~~l~~ia~~~~~s~aq~al~w~l~~~--~~vi~g~~~~~~l~enl~a~~-~~L~~~~~~~l~~~ 300 (327)
... ..+.+.++|+ |+|++|+||+|++++| ++||||+++++|+++|+++++ ++||+++++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~l~~ia~--g~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~~Ls~ee~~~l~~~ 306 (317)
T 1ynp_A 229 LPEGEGYLNYRYDELKLLRESLPT--DRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKL 306 (317)
T ss_dssp CCTTCCBTTBCHHHHHHHHHHSCS--SSCHHHHHHHHHHTSTTEEEEECCCSSHHHHHHHHHHHTSCCCCHHHHHHHHHH
T ss_pred CccccccccccHHHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 000 1256778887 9999999999999999 689999999999999999998 89999999999999
Q ss_pred CCCCcc
Q 044053 301 PQHRLI 306 (327)
Q Consensus 301 ~~~~~~ 306 (327)
....++
T Consensus 307 ~~~~~~ 312 (317)
T 1ynp_A 307 AKAAVY 312 (317)
T ss_dssp SCCCCC
T ss_pred Hhhhcc
Confidence 876543
No 38
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=1.3e-61 Score=441.99 Aligned_cols=240 Identities=22% Similarity=0.252 Sum_probs=210.5
Q ss_pred ccccCeeecCCCCCCcccCcceeeccccC-------------CChHHHHHHHHHHHHcCCCEEeCCCCcC-CHHHHHHHH
Q 044053 9 VFNVPKLKLSSSSGHLNMPVIGLGCAVDK-------------SDTDALKLAVLEAIKLGYRHFDTAAMYG-TEKALGEAI 74 (327)
Q Consensus 9 ~~~m~~~~Lg~t~g~~~vs~lglG~~~~~-------------~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-sE~~lG~~L 74 (327)
...|+||+||+| | ++||+||||||+++ .+++++.++|+.|++.|||+||||+.|| ||+.||++|
T Consensus 27 ~~~m~~r~Lg~t-g-~~vs~lglGt~~~g~~~~~~~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~sE~~lG~al 104 (292)
T 4exb_A 27 TLHDLHRPLGDT-G-LAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGRSEERLGPLL 104 (292)
T ss_dssp CSTTCCEECTTS-S-CEECSEEEECSTTTCC---------CCCCHHHHHHHHHHHHHTTCCEEECCTTSTTHHHHHHHHH
T ss_pred CCCceeeecCCC-C-CccCCEeEcccccCCCcccccccccCCCCHHHHHHHHHHHHHcCCCEEEcCCccchHHHHHHHHh
Confidence 346999999999 9 99999999999876 3568899999999999999999999999 999999999
Q ss_pred HHHHhcCCCCCCCcEEEEeccCC--------CCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCC
Q 044053 75 AEALRLGLVSSREQLFITSKLWC--------QNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDL 146 (327)
Q Consensus 75 ~~~~~~g~~~~R~~v~I~tK~~~--------~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~ 146 (327)
+. +|+++||+||++. .+.+++.+++++++||+|||+||||+|++|||....
T Consensus 105 ~~--------~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~------------- 163 (292)
T 4exb_A 105 RG--------QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDL------------- 163 (292)
T ss_dssp TT--------TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHH-------------
T ss_pred cc--------CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCc-------------
Confidence 83 7999999999973 256889999999999999999999999999993210
Q ss_pred CCCCHH-HHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccH-HHHHHHHHcCCEEEEecCC
Q 044053 147 LPMDYR-GVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQR-KLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 147 ~~~~~~-~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~-~ll~~~~~~gi~v~a~~pl 224 (327)
..... ++|++|++|+++||||+||||||++++++++++. |+++|++||+++++. +++++|+++||++++|+||
T Consensus 164 -~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~----~~~~Q~~~~~~~~~~~~l~~~~~~~gi~v~a~spL 238 (292)
T 4exb_A 164 -DILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE----GDCAMVTYNLNERAERPVIEYAAAHAKGILVKKAL 238 (292)
T ss_dssp -HHHHHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH----SSEEEEECSSSCCTTHHHHHHHHHTTCEEEEECCS
T ss_pred -cccchHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh----hcEEeeccccccCCHHHHHHHHHHCCcEEEEeccc
Confidence 01133 8999999999999999999999999999999987 789999999999985 9999999999999999999
Q ss_pred CCCCccCCCCcccChHHHHHHHHHcCCCHHHHHHHHHHhcC--CEEeecCCCHHHHHHhhcccccccCHH
Q 044053 225 GAVGKIYGSNQVLENEALKEIAKAHGKTVAQVSLRWIVEQG--ATVVVKSLNLERMKQNLGIFDWKLTDD 292 (327)
Q Consensus 225 ~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~~~--~~vi~g~~~~~~l~enl~a~~~~L~~~ 292 (327)
++ |+|.+ ++|+|++|+||+|++++| ++||||+++++|++||++++++.||+|
T Consensus 239 ~~-G~L~~---------------~~g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 239 AS-GHACL---------------GAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp CC------------------------CCHHHHHHHHHHHSTTCCEEEECCCCHHHHHHHHHHHHHHHC--
T ss_pred cC-CccCC---------------CCCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHHhhccCCCC
Confidence 98 87632 389999999999999999 799999999999999999999999875
No 39
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=1.7e-60 Score=442.01 Aligned_cols=262 Identities=22% Similarity=0.283 Sum_probs=231.3
Q ss_pred ccCcceeeccccC--CChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCC-
Q 044053 25 NMPVIGLGCAVDK--SDTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQ- 98 (327)
Q Consensus 25 ~vs~lglG~~~~~--~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~- 98 (327)
.+|+||||||+++ .+.+++.++|+.|+++|||+||||+.|| ||+.||++|++. +. .|+++||+||+++.
T Consensus 4 ~~~~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~--~r~~~~i~TK~~~~~ 78 (327)
T 1gve_A 4 ARPATVLGAMEMGRRMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGL---GR--SGCKVKIATKAAPMF 78 (327)
T ss_dssp CCCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCT---TS--TTCCSEEEEEECSCT
T ss_pred CCCCeEEcccccCCCCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhc---CC--CCCeEEEEEEECCCC
Confidence 4799999999987 3778999999999999999999999994 999999999743 32 47889999999765
Q ss_pred --CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecccc
Q 044053 99 --NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFS 176 (327)
Q Consensus 99 --~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~ 176 (327)
+.+++.+++++++||+|||+||||+|++|||+... ..+++|++|++|+++||||+||||||+
T Consensus 79 ~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~----------------~~~e~~~al~~l~~~Gkir~iGvSn~~ 142 (327)
T 1gve_A 79 GKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGT----------------PIEETLQACHQLHQEGKFVELGLSNYV 142 (327)
T ss_dssp TCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTS----------------CHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCC----------------CHHHHHHHHHHHHhCCceeEEEecCCC
Confidence 67899999999999999999999999999997543 378999999999999999999999999
Q ss_pred HHHHHHHHHhCC----CCCeeeecccCccccc--HHHHHHHHHcCCEEEEecCCCCCCccCCCCc-----------ccC-
Q 044053 177 CKKIETILTFAT----IPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQ-----------VLE- 238 (327)
Q Consensus 177 ~~~l~~~~~~~~----~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~-----------~~~- 238 (327)
.++++++++.+. ++|+++|++||+++++ .+++++|+++||++++|+||++ |+|+++.. .+.
T Consensus 143 ~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~~~~~~~~~~~ 221 (327)
T 1gve_A 143 SWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAG-GLLTGRYKYQDKDGKNPESRFFG 221 (327)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGGSCCCSSSSSS
T ss_pred HHHHHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEeccccc-ccccCcccCCCccccCCCccccc
Confidence 999999887654 7899999999999987 6899999999999999999998 99876421 111
Q ss_pred -------------------hHHHHHHHHH----cCCCHHHHHHHHHHhcC-------CEEeecCCCHHHHHHhhccccc-
Q 044053 239 -------------------NEALKEIAKA----HGKTVAQVSLRWIVEQG-------ATVVVKSLNLERMKQNLGIFDW- 287 (327)
Q Consensus 239 -------------------~~~l~~ia~~----~~~s~aq~al~w~l~~~-------~~vi~g~~~~~~l~enl~a~~~- 287 (327)
.+.+.++|++ +|+|++|+||+|++++| ++||+|+++++|+++|++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~~I~g~~~~~~l~en~~a~~~~ 301 (327)
T 1gve_A 222 NPFSQLYMDRYWKEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQNLALVEEG 301 (327)
T ss_dssp CTTHHHHHHHHCSHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTSSCCGGGTCEEEECCSSHHHHHHHHHHTTCC
T ss_pred cccchhhhhcccChHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHhCCCccccCCCeEEECCCCHHHHHHHHHhcCCC
Confidence 1688999999 99999999999999976 5899999999999999999986
Q ss_pred ccCHHHHHHHhcCCCCCccCC
Q 044053 288 KLTDDDYDKINQIPQHRLIPS 308 (327)
Q Consensus 288 ~L~~~~~~~l~~~~~~~~~~~ 308 (327)
+|++++++.|+++....+...
T Consensus 302 ~L~~e~~~~l~~~~~~~~~~~ 322 (327)
T 1gve_A 302 PLEPAVVDAFDQAWNLVAHEC 322 (327)
T ss_dssp CCCHHHHHHHHHHHHHHGGGC
T ss_pred CCCHHHHHHHHHHHHhccCCC
Confidence 899999999999876544433
No 40
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=4.3e-60 Score=444.33 Aligned_cols=266 Identities=24% Similarity=0.272 Sum_probs=229.2
Q ss_pred cCCCCCCcccCcceeeccccC--CChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCCcEEE
Q 044053 17 LSSSSGHLNMPVIGLGCAVDK--SDTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFI 91 (327)
Q Consensus 17 Lg~t~g~~~vs~lglG~~~~~--~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~R~~v~I 91 (327)
.+.+ + ..||+||||||++| .+.+++.++|+.|+++|||+||||+.|| ||+.||++|++. .+ .|+++||
T Consensus 31 ~~~~-~-~~ip~lglGt~~~g~~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~--~~---~r~~v~I 103 (360)
T 2bp1_A 31 MSRP-P-PPRVASVLGTMEMGRRMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGL--GG---GDCRVKI 103 (360)
T ss_dssp ---------CCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCT--TS---TTCCCEE
T ss_pred cCCC-C-CCCCCEEECchhhCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhc--cC---CCCeEEE
Confidence 3444 6 78999999999987 3778999999999999999999999994 999999999631 12 4667999
Q ss_pred EeccCCC---CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc
Q 044053 92 TSKLWCQ---NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK 168 (327)
Q Consensus 92 ~tK~~~~---~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir 168 (327)
+||+++. +.+++.+++++++||+|||+||||+|++|||+... ..+++|++|++|+++||||
T Consensus 104 ~TK~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~----------------~~~e~~~aL~~l~~~Gkir 167 (360)
T 2bp1_A 104 ATKANPWDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGT----------------PVEETLHACQRLHQEGKFV 167 (360)
T ss_dssp EEEECCCTTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTS----------------CHHHHHHHHHHHHHTTSEE
T ss_pred EeeecCCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCC----------------CHHHHHHHHHHHHHCCCcc
Confidence 9999765 67899999999999999999999999999997542 3789999999999999999
Q ss_pred EEEeccccHHHHHHHHHhCC----CCCeeeecccCccccc--HHHHHHHHHcCCEEEEecCCCCCCccCCCCc-------
Q 044053 169 SIGLSNFSCKKIETILTFAT----IPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQ------- 235 (327)
Q Consensus 169 ~iGvS~~~~~~l~~~~~~~~----~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~------- 235 (327)
+||||||+.++++++++.+. ++|+++|++||+++++ .+++++|+++||++++|+||++ |+|+++..
T Consensus 168 ~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~~~ 246 (360)
T 2bp1_A 168 ELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAG-GLLTGKYKYEDKDGK 246 (360)
T ss_dssp EEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGTTT
T ss_pred EEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEeccccc-CcccCCccCcCcccc
Confidence 99999999999999887654 7899999999999987 6899999999999999999998 99876421
Q ss_pred ----ccC--------------------hHHHHHHHHH----cCCCHHHHHHHHHHhcC-------CEEeecCCCHHHHHH
Q 044053 236 ----VLE--------------------NEALKEIAKA----HGKTVAQVSLRWIVEQG-------ATVVVKSLNLERMKQ 280 (327)
Q Consensus 236 ----~~~--------------------~~~l~~ia~~----~~~s~aq~al~w~l~~~-------~~vi~g~~~~~~l~e 280 (327)
.+. .+.+.++|++ +|+|++|+||+|++++| +++|+|+++++||++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~vI~G~~~~~~l~e 326 (360)
T 2bp1_A 247 QPVGRFFGNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQ 326 (360)
T ss_dssp CCSBTTBSSTTHHHHHHHHCCHHHHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHSSCCGGGTCEEEECCSSHHHHHH
T ss_pred cccccccccccchhhhhcccchhHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCcccccCCCeEEECCCCHHHHHH
Confidence 111 1678999999 99999999999999876 589999999999999
Q ss_pred hhccccc-ccCHHHHHHHhcCCCCCcc
Q 044053 281 NLGIFDW-KLTDDDYDKINQIPQHRLI 306 (327)
Q Consensus 281 nl~a~~~-~L~~~~~~~l~~~~~~~~~ 306 (327)
|++++++ +|++++++.|+++....+.
T Consensus 327 nl~a~~~~~L~~e~~~~l~~~~~~~~~ 353 (360)
T 2bp1_A 327 NLAATEEGPLEPAVVDAFNQAWHLVAH 353 (360)
T ss_dssp HHHHHTSCCCCHHHHHHHHHHHHHHGG
T ss_pred HHHhcCCCCCCHHHHHHHHHHHHhccC
Confidence 9999987 8999999999998765443
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.09 E-value=1.4e-06 Score=88.50 Aligned_cols=131 Identities=14% Similarity=0.086 Sum_probs=93.0
Q ss_pred HHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe--ccccH---H-----
Q 044053 109 LKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL--SNFSC---K----- 178 (327)
Q Consensus 109 le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv--S~~~~---~----- 178 (327)
++.||++|++||+|+ ++|.-+. ....++++++++++.+|+|+++|+ |++.. .
T Consensus 231 ~e~sL~~L~~d~vdI-~I~Ghn~-----------------~~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~ 292 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFL-CVIGHNV-----------------AGVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRR 292 (807)
T ss_dssp EEESGGGSCTTSCEE-EEESSCC-----------------HHHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCC
T ss_pred eeccccccCCCCceE-EEECCcC-----------------ccHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccc
Confidence 567889999999999 5775422 124688999999999999999954 44443 1
Q ss_pred -----------HHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHH
Q 044053 179 -----------KIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAK 247 (327)
Q Consensus 179 -----------~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~ 247 (327)
...+.++.. .+.+.+++|+... .++++.|.++|++|++++|.++.|.+...
T Consensus 293 ~~~~pv~G~~~~~~~~i~tG--a~dv~vV~~n~i~--~~ll~~a~~~Gm~Vit~sp~~~~Grpd~~-------------- 354 (807)
T 3cf4_A 293 PPYAKVIGSMSKELKVIRSG--MPDVIVVDEQCVR--GDIVPEAQKLKIPVIASNPKIMYGLPNRT-------------- 354 (807)
T ss_dssp CCCSEEEESGGGHHHHHHHT--CCSEEEECSSSCC--TTHHHHHHHTTCCEEECSTTCCTTCCBCT--------------
T ss_pred cccccccccHHHHHHHhhcC--CCeEEEEEecCCC--hHHHHHHHHCCCEEEEechhhhcCCCccc--------------
Confidence 234445544 3567777887765 36889999999999999999864554221
Q ss_pred HcCCCHHHHHHHHHHhcC--CEEeecCCCHHHH
Q 044053 248 AHGKTVAQVSLRWIVEQG--ATVVVKSLNLERM 278 (327)
Q Consensus 248 ~~~~s~aq~al~w~l~~~--~~vi~g~~~~~~l 278 (327)
+ .+++.+++|+++++ .++++|..++.++
T Consensus 355 --d-~~~~~~le~LLs~~~~~~l~~g~~~~~el 384 (807)
T 3cf4_A 355 --D-ADVDETMEELKSGKIPGCVMLDYDKLGEL 384 (807)
T ss_dssp --T-SCHHHHHHHHHTTSSSEEECCCHHHHHHH
T ss_pred --c-chHHHHHHHHHhCCCCCceeeCCccHHHH
Confidence 1 22788999999987 3566676666654
No 42
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=82.67 E-value=27 Score=31.91 Aligned_cols=153 Identities=10% Similarity=0.063 Sum_probs=91.8
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCCHHH--HHHHHHHHHhcCCCCCCCcEEEE-eccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGTEKA--LGEAIAEALRLGLVSSREQLFIT-SKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~--lG~~L~~~~~~g~~~~R~~v~I~-tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+..+.+++.|++.|..=-...-+.. .=+++++.+ -+++-|. .... ...+.+...+ +-+.|+.
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~-------g~~~~l~~vDan-~~~~~~~A~~-~~~~l~~ 212 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEF-------GSRVRIKSYDFS-HLLNWKDAHR-AIKRLTK 212 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH-------GGGCEEEEEECT-TCSCHHHHHH-HHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHc-------CCCCcEEEecCC-CCcCHHHHHH-HHHHHHh
Confidence 4567777788889999999874322121111 224555432 2344555 5542 2334443332 2234455
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQ 195 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q 195 (327)
+++ ++.++..|... +-++.+.++++.-.|.= |=+.++...++++++.... +++|
T Consensus 213 ~~i---~~~~iEqP~~~--------------------~d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~--d~v~ 266 (391)
T 3gd6_A 213 YDL---GLEMIESPAPR--------------------NDFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAI--DIFN 266 (391)
T ss_dssp CCS---SCCEEECCSCT--------------------TCHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCC--SEEE
T ss_pred cCC---CcceecCCCCh--------------------hhHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCC--CEEE
Confidence 543 23556665321 12466777877766654 8889999999999987654 4676
Q ss_pred cccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 196 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 196 ~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+..+-+ ..-.++...|+++|+.++..+.+.+
T Consensus 267 ~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 300 (391)
T 3gd6_A 267 ISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQEL 300 (391)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred ECchhcCCHHHHHHHHHHHHHcCCEEEecCCCcc
Confidence 665443 2226789999999999988765543
No 43
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=82.39 E-value=29 Score=31.67 Aligned_cols=146 Identities=11% Similarity=0.070 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC----HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs----E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+....+.+.|++.|..--.-++ .+.+ +++++.+ | +++-|.... +..++.+...+-++. |+
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~av--g-----~d~~l~vDa-n~~~~~~~a~~~~~~-l~ 231 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARV-TAVRKHL--G-----DAVPLMVDA-NQQWDRPTAQRMCRI-FE 231 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHH-HHHHHHH--C-----TTSCEEEEC-TTCCCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHc--C-----CCCEEEEEC-CCCCCHHHHHHHHHH-HH
Confidence 5677777888889999998874211122 2333 4555532 2 233344444 234556666655544 78
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-eccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++|. .|.+ .+-++.+.+++++-.|-=++ =+.++...++++++.... ++
T Consensus 232 ~~~i~~iE-----~P~~--------------------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~ 284 (393)
T 2og9_A 232 PFNLVWIE-----EPLD--------------------AYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAA--DY 284 (393)
T ss_dssp GGCCSCEE-----CCSC--------------------TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SE
T ss_pred hhCCCEEE-----CCCC--------------------cccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCC--CE
Confidence 88877664 3321 01246667777765555443 345678999999886543 46
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEe
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~ 221 (327)
+|+..+-. ..-.++...|+++|+.++..
T Consensus 285 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h 315 (393)
T 2og9_A 285 LMPDAPRVGGITPFLKIASLAEHAGLMLAPH 315 (393)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCC
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCEEecc
Confidence 66654432 22267899999999998743
No 44
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=79.45 E-value=19 Score=33.02 Aligned_cols=146 Identities=15% Similarity=0.103 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC----HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs----E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+....+.+.|++.|..--.-++ .+.+ +++++.+ | +++-|..+.. ..++.+...+-++. |+
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v-~avR~av--G-----~d~~l~vDan-~~~~~~~ai~~~~~-l~ 244 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRL-TAVREAL--G-----DEFPLMVDAN-QQWDRETAIRMGRK-ME 244 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHH-HHHHHHH--C-----SSSCEEEECT-TCSCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHH-HHHHHHc--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HH
Confidence 5677777788889999998875211112 2333 4555432 2 2344444542 33456666555554 78
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-eccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++|. .|.+. +-++.+.+++++-.|-=++ =+.++...++++++.... ++
T Consensus 245 ~~~i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~ 297 (398)
T 2pp0_A 245 QFNLIWIE-----EPLDA--------------------YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNAS--DF 297 (398)
T ss_dssp GGTCSCEE-----CCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SE
T ss_pred HcCCceee-----CCCCh--------------------hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC--CE
Confidence 88776653 44211 1256667777765555443 345678899999886543 46
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEe
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~ 221 (327)
+|+..+-. ..-.++...|+++|+.++..
T Consensus 298 v~ik~~~~GGite~~~i~~~A~~~gi~~~~h 328 (398)
T 2pp0_A 298 VQPDAPRVGGISPFLKIMDLAAKHGRKLAPH 328 (398)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 66654432 22267899999999998743
No 45
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=79.10 E-value=35 Score=30.82 Aligned_cols=151 Identities=11% Similarity=0.093 Sum_probs=90.4
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHh
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 116 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg--sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL 116 (327)
+.++..+.++.+++.|++.|-.=-... .+...=+++++.+ .+++-|.... +...+.+...+ +-+.|+.+
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~-------g~~~~l~vDa-N~~~~~~~A~~-~~~~l~~~ 210 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAA-------GDSITLRIDA-NQGWSVETAIE-TLTLLEPY 210 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-------CSSSEEEEEC-TTCBCHHHHHH-HHHHHGGG
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHHh-------CCCCeEEEEC-CCCCChHHHHH-HHHHHhhc
Confidence 567777778888899999986432221 1222224555432 2344455554 23344444332 33456667
Q ss_pred CCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeee
Q 044053 117 QMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQ 195 (327)
Q Consensus 117 ~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q 195 (327)
++++|. .|.+ .+-++.+.+++++-.|. ..|=+-++...+.++++.... +++|
T Consensus 211 ~i~~iE-----qP~~--------------------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--d~v~ 263 (368)
T 3q45_A 211 NIQHCE-----EPVS--------------------RNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQAC--DSFN 263 (368)
T ss_dssp CCSCEE-----CCBC--------------------GGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCC--SEEE
T ss_pred CCCEEE-----CCCC--------------------hhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC--CeEE
Confidence 766664 4421 11245667777765554 344466789999999886544 4777
Q ss_pred cccCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 196 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 196 ~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
+...-. ..-.++...|+++|+.++..+.+.
T Consensus 264 ~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~e 296 (368)
T 3q45_A 264 LKLSKSAGITNALNIIRLAEQAHMPVQVGGFLE 296 (368)
T ss_dssp ECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSC
T ss_pred echhhcCCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 776554 222679999999999998866654
No 46
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=77.44 E-value=43 Score=30.56 Aligned_cols=151 Identities=10% Similarity=0.142 Sum_probs=90.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+....+.+.|++.|..--.-. ..+.+ +++++.+ | +++-|..... ...+.+...+-++ .|+.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avR~a~--g-----~d~~l~vDan-~~~~~~~a~~~~~-~l~~ 214 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMV-AEVRRAV--G-----DDVDLFIDIN-GAWTYDQALTTIR-ALEK 214 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHH-HHHHHHH--C-----TTSCEEEECT-TCCCHHHHHHHHH-HHGG
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHH-HHHHHhh--C-----CCCEEEEECC-CCCCHHHHHHHHH-HHHh
Confidence 456677777888899999886421111 12233 4455432 2 2344444442 3345565555443 5777
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-EeccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
+++++|. .|.+. +-++.+.+++++-.|-=. |=+.++...++++++.... +++
T Consensus 215 ~~i~~iE-----qP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v 267 (397)
T 2qde_A 215 YNLSKIE-----QPLPA--------------------WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAA--DGL 267 (397)
T ss_dssp GCCSCEE-----CCSCT--------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCC--SEE
T ss_pred CCCCEEE-----CCCCh--------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEE
Confidence 7777654 44211 125677777776555533 3345678899999887644 466
Q ss_pred ecccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 195 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 195 q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
|+..+-. ..-.++...|+++|+.++..+.+.+
T Consensus 268 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 302 (397)
T 2qde_A 268 MIKTQKAGGLLKAQRWLTLARLANLPVICGCMVGS 302 (397)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCC
T ss_pred EEeccccCCHHHHHHHHHHHHHcCCeEEEecCccc
Confidence 6655432 2226789999999999998765543
No 47
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=76.19 E-value=31 Score=31.44 Aligned_cols=151 Identities=15% Similarity=0.120 Sum_probs=88.1
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCC------------CcC--CHHHHH------HHHHHHHhcCCCCCCCcEEEEeccCC
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAA------------MYG--TEKALG------EAIAEALRLGLVSSREQLFITSKLWC 97 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~------------~Yg--sE~~lG------~~L~~~~~~g~~~~R~~v~I~tK~~~ 97 (327)
.+.++..+....+.+.|++.|..-. .|| .+..+. +++++. --+++-|.....
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a-------~G~d~~l~vD~n- 207 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDA-------AGPEIELMVDLS- 207 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHH-------HCTTSEEEEECT-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHh-------cCCCCEEEEECC-
Confidence 3567777778888999999886322 243 122222 233332 123555555653
Q ss_pred CCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-cccc
Q 044053 98 QNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFS 176 (327)
Q Consensus 98 ~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv-S~~~ 176 (327)
...+.+...+-++. |+.++ +.++..|.+. +-++.+.+++++-.|-=++- +.++
T Consensus 208 ~~~~~~~a~~~~~~-l~~~~-----i~~iE~P~~~--------------------~~~~~~~~l~~~~~ipIa~dE~~~~ 261 (392)
T 2poz_A 208 GGLTTDETIRFCRK-IGELD-----ICFVEEPCDP--------------------FDNGALKVISEQIPLPIAVGERVYT 261 (392)
T ss_dssp TCSCHHHHHHHHHH-HGGGC-----EEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCH
T ss_pred CCCCHHHHHHHHHH-HHhcC-----CCEEECCCCc--------------------ccHHHHHHHHhhCCCCEEecCCcCC
Confidence 23455554444433 55554 4455555321 12566777777666654443 3456
Q ss_pred HHHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 177 CKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
...++++++... .+++|+..+-. ..-.++..+|+++|+.++..+..
T Consensus 262 ~~~~~~~i~~~~--~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 262 RFGFRKIFELQA--CGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHHHHTTTC--CSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHHcCC--CCEEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 788888887654 34777765543 22367999999999999876554
No 48
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=75.81 E-value=41 Score=30.71 Aligned_cols=150 Identities=13% Similarity=0.050 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCC------Cc------C---CHHHH------HHHHHHHHhcCCCCCCCcEEEEeccCC
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAA------MY------G---TEKAL------GEAIAEALRLGLVSSREQLFITSKLWC 97 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~------~Y------g---sE~~l------G~~L~~~~~~g~~~~R~~v~I~tK~~~ 97 (327)
+.++..+....+.+.|++.|..-. .| + ++..+ =+++++. --+++-|.....
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~a-------vG~d~~l~vDan- 217 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNA-------VGPDVDIIVENH- 217 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHH-------HCTTSEEEEECT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHH-------hCCCCeEEEECC-
Confidence 567777778888899999987432 22 0 11111 1233332 123556666653
Q ss_pred CCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-cccc
Q 044053 98 QNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFS 176 (327)
Q Consensus 98 ~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv-S~~~ 176 (327)
..++.+...+-++. |+.++ +.++..|.+. +-++.+.+++++-.|-=++- +.++
T Consensus 218 ~~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~ 271 (403)
T 2ox4_A 218 GHTDLVSAIQFAKA-IEEFN-----IFFYEEINTP--------------------LNPRLLKEAKKKIDIPLASGERIYS 271 (403)
T ss_dssp TCSCHHHHHHHHHH-HGGGC-----EEEEECCSCT--------------------TSTHHHHHHHHTCCSCEEECTTCCH
T ss_pred CCCCHHHHHHHHHH-HHhhC-----CCEEeCCCCh--------------------hhHHHHHHHHHhCCCCEEecCCcCC
Confidence 33455555444443 56554 4455555321 12467777887766664443 3456
Q ss_pred HHHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 177 CKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
...++++++.... +++|+..+-. ..-.++...|+++|+.++..+..
T Consensus 272 ~~~~~~~i~~~~~--d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 272 RWGFLPFLEDRSI--DVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp HHHHHHHHHTTCC--SEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred HHHHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 7889998876543 4666655432 22267899999999999876554
No 49
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=73.71 E-value=51 Score=29.69 Aligned_cols=147 Identities=17% Similarity=0.151 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC-CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhC
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 117 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~ 117 (327)
+.++..+....+.+.|++.|..--.-. ..+.+ +++++. - +++-|.... +...+.+. .+-++ .|+.++
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v-~avr~a-------~-~~~~l~vDa-n~~~~~~~-~~~~~-~l~~~~ 215 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPV-RATREA-------F-PDIRLTVDA-NSAYTLAD-AGRLR-QLDEYD 215 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHH-HHHHHH-------C-TTSCEEEEC-TTCCCGGG-HHHHH-TTGGGC
T ss_pred CHHHHHHHHHHHHHhcccEEEEecChHHHHHHH-HHHHHH-------c-CCCeEEEeC-CCCCCHHH-HHHHH-HHHhCC
Confidence 456677778888899999876421101 33334 566654 3 444455554 23345566 44433 377777
Q ss_pred CCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeeec
Q 044053 118 MEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQV 196 (327)
Q Consensus 118 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q~ 196 (327)
+++|+ .|.+. +-++.+.+++++-.|- ..|=+.++...+.++++.... +++|+
T Consensus 216 i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~i 268 (375)
T 1r0m_A 216 LTYIE-----QPLAW--------------------DDLVDHAELARRIRTPLCLDESVASASDARKALALGAG--GVINL 268 (375)
T ss_dssp CSCEE-----CCSCT--------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSC--SEEEE
T ss_pred CcEEE-----CCCCc--------------------ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCC--CEEEE
Confidence 66665 44221 1135566666654444 334455778999999887644 47777
Q ss_pred ccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 197 EMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 197 ~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
..+-. ..-.++...|+++|+.++.-+-+
T Consensus 269 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 269 KVARVGGHAESRRVHDVAQSFGAPVWCGGML 299 (375)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred CcchhcCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 66543 22267899999999997654444
No 50
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=73.69 E-value=42 Score=31.18 Aligned_cols=145 Identities=13% Similarity=0.134 Sum_probs=85.3
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCCCcCC----HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSL 113 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs----E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL 113 (327)
.+.++..+....+.+.|++.|-.--. ++ .+.+ +++++.+ | +++-|.-... ...+.+...+-++. |
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g-~~~~~d~e~v-~avR~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~~-l 265 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVG-ANVQDDIRRC-RLARAAI--G-----PDIAMAVDAN-QRWDVGPAIDWMRQ-L 265 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECC-SCHHHHHHHH-HHHHHHH--C-----SSSEEEEECT-TCCCHHHHHHHHHT-T
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC-CCHHHHHHHH-HHHHHhc--C-----CCCeEEEECC-CCCCHHHHHHHHHH-H
Confidence 35677777788889999998874211 12 2223 4455431 2 3444444442 33455555544444 6
Q ss_pred HHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCcc-EEEeccccHHHHHHHHHhCCCCC
Q 044053 114 SALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQML-GLTK-SIGLSNFSCKKIETILTFATIPP 191 (327)
Q Consensus 114 ~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-Gkir-~iGvS~~~~~~l~~~~~~~~~~~ 191 (327)
+.+++++| ..|... +-++.+.++++. +.|- ..|=+.++...++++++....
T Consensus 266 ~~~~i~~i-----EqP~~~--------------------~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~-- 318 (441)
T 2hxt_A 266 AEFDIAWI-----EEPTSP--------------------DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAV-- 318 (441)
T ss_dssp GGGCCSCE-----ECCSCT--------------------TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCC--
T ss_pred HhcCCCee-----eCCCCH--------------------HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCC--
Confidence 76776654 344221 124556666665 2333 444566788999999887644
Q ss_pred eeeecccCcc---cccHHHHHHHHHcCCEEEE
Q 044053 192 SINQVEMHPV---WQQRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 192 ~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a 220 (327)
+++|+..+-. ..-..+...|+++|+.++.
T Consensus 319 d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~ 350 (441)
T 2hxt_A 319 DLIQIDAARVGGVNENLAILLLAAKFGVRVFP 350 (441)
T ss_dssp SEECCCTTTSSHHHHHHHHHHHHHHTTCEECC
T ss_pred CEEEeCcceeCCHHHHHHHHHHHHHcCCeEEE
Confidence 4777765543 2226789999999999853
No 51
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=72.76 E-value=58 Score=29.83 Aligned_cols=148 Identities=16% Similarity=0.171 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHHcCCCEEeCCCCcC-CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhCC
Q 044053 40 TDALKLAVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 118 (327)
Q Consensus 40 ~~~~~~~l~~A~~~Gi~~~DTA~~Yg-sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~ 118 (327)
.++..+.++.+++.|++.|..=-.-. ..+.+ +++++.+ | + ++-|.... +...+.+. .+ +-+.|+.+++
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~~~~d~~~v-~avR~a~--G---~--~~~L~vDa-N~~w~~~~-~~-~~~~l~~~~i 232 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIKPGWDVEPL-QETRRAV--G---D--HFPLWTDA-NSSFELDQ-WE-TFKAMDAAKC 232 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECBTTBSHHHH-HHHHHHH--C---T--TSCEEEEC-TTCCCGGG-HH-HHHHHGGGCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCcchHHHHH-HHHHHhc--C---C--CCEEEEeC-CCCCCHHH-HH-HHHHHHhcCC
Confidence 67777888889999999886422112 23333 4565542 2 2 33334443 23345566 33 3456777776
Q ss_pred CceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeeecc
Q 044053 119 EYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQVE 197 (327)
Q Consensus 119 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q~~ 197 (327)
++|. .|... +-++.+.++++.-.|. ..|=+.++...+.++++.... +++|+.
T Consensus 233 ~~iE-----qP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--d~v~~k 285 (400)
T 3mwc_A 233 LFHE-----QPLHY--------------------EALLDLKELGERIETPICLDESLISSRVAEFVAKLGIS--NIWNIK 285 (400)
T ss_dssp SCEE-----SCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCC--SEEEEC
T ss_pred CEEe-----CCCCh--------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCC--CEEEEc
Confidence 6664 44221 1246677777765554 455567789999999886544 467766
Q ss_pred cCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 198 MHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 198 ~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
..-+ ..-.++...|+++|+.++..+.+.
T Consensus 286 ~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 316 (400)
T 3mwc_A 286 IQRVGGLLEAIKIYKIATDNGIKLWGGTMPE 316 (400)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred chhhCCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence 5443 222678999999999998766553
No 52
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=72.61 E-value=52 Score=29.73 Aligned_cols=150 Identities=12% Similarity=0.054 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhCC
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 118 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~ 118 (327)
+.++..+....+.+.|++.|..--.- +-+..-+.++.. ++. -.+++-|..+.. ...+.+...+-+ +.|+.++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~av-r~a---~g~d~~l~vDan-~~~~~~~a~~~~-~~l~~~~- 216 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRAC-LPL---LEPGEKAMADAN-QGWRVDNAIRLA-RATRDLD- 216 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHH-GGG---SCTTCEEEEECT-TCSCHHHHHHHH-HHTTTSC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHH-HHh---cCCCCEEEEECC-CCCCHHHHHHHH-HHHHhCC-
Confidence 45667777888899999998752111 212222233321 111 224566666653 234444443332 2244443
Q ss_pred CceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-ccccHHHHHHHHHhCCCCCeeeecc
Q 044053 119 EYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSCKKIETILTFATIPPSINQVE 197 (327)
Q Consensus 119 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~~~q~~ 197 (327)
+ ++..|. . -++.+.++++.-.|-=++. +.++.+.++++++.... +++|+.
T Consensus 217 ----i-~iE~P~-------------------~---~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~--d~v~ik 267 (379)
T 2rdx_A 217 ----Y-ILEQPC-------------------R---SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGA--EICCLK 267 (379)
T ss_dssp ----C-EEECCS-------------------S---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCC--SEEEEE
T ss_pred ----e-EEeCCc-------------------C---CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEEEe
Confidence 3 444441 1 3577788887766654443 44678899999887654 467766
Q ss_pred cCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 198 MHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 198 ~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
.+.. ..-.++...|+++|+.++..+.+.
T Consensus 268 ~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (379)
T 2rdx_A 268 ISNLGGLSKARRTRDFLIDNRMPVVAEDSWG 298 (379)
T ss_dssp TTTTTSHHHHHHHHHHHHHTTCCEEEECSBC
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEEeeccC
Confidence 6553 223678999999999999876443
No 53
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=72.37 E-value=32 Score=30.77 Aligned_cols=101 Identities=14% Similarity=0.065 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhCCCceeEEEe-ecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEec-----cccHH
Q 044053 105 VIPALKKSLSALQMEYLDLYLV-HLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLS-----NFSCK 178 (327)
Q Consensus 105 i~~~le~SL~rL~~d~iDl~~l-H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS-----~~~~~ 178 (327)
+.+...+..+..|.|.||+-.- -+|+.. ..+.++..+.++.+++.-.+ -|-|- +++++
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~---------------~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~e 145 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGA---------------NHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHE 145 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTT---------------CCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCC---------------CCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHH
Confidence 3333333347789999997432 222211 23466677777777765322 25555 66789
Q ss_pred HHHHHHHhCC-CCCeeeecccCcccccHHHHHHHHHcCCEEEEecCC
Q 044053 179 KIETILTFAT-IPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 179 ~l~~~~~~~~-~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
.++++++.+. ..+.+|-+... +..++++.|+++|..++++.|.
T Consensus 146 V~eaAleagag~~~lINsv~~~---~~~~m~~laa~~g~~vVlmh~~ 189 (323)
T 4djd_D 146 VLEAVAEAAAGENLLLGNAEQE---NYKSLTAACMVHKHNIIARSPL 189 (323)
T ss_dssp HHHHHHHHTTTSCCEEEEEBTT---BCHHHHHHHHHHTCEEEEECSS
T ss_pred HHHHHHHhcCCCCCeEEECCcc---cHHHHHHHHHHhCCeEEEEccc
Confidence 9999999874 34567655442 2378999999999999999864
No 54
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=72.30 E-value=52 Score=30.12 Aligned_cols=149 Identities=10% Similarity=0.144 Sum_probs=88.2
Q ss_pred ChHHHHHHHHHHHHcCCCEEeC--CCCcCC------------------HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCC
Q 044053 39 DTDALKLAVLEAIKLGYRHFDT--AAMYGT------------------EKALGEAIAEALRLGLVSSREQLFITSKLWCQ 98 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DT--A~~Ygs------------------E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~ 98 (327)
+.++..+....+.+.|++.|-. ++.||. .+.+ +++++.+ | +++-|..... .
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v-~avRea~--G-----~d~~l~vDan-~ 219 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARV-AAVREAV--G-----PEVEVAIDMH-G 219 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHH-HHHHHHH--C-----SSSEEEEECT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHH-HHHHHhc--C-----CCCEEEEECC-C
Confidence 4566667778888999998763 222331 1122 2334321 2 3555555653 3
Q ss_pred CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-eccccH
Q 044053 99 NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSC 177 (327)
Q Consensus 99 ~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iG-vS~~~~ 177 (327)
.++.+...+-++. |+.+++++| ..|... +-++.+.+++++-.|-=++ =+.++.
T Consensus 220 ~~~~~~a~~~~~~-l~~~~i~~i-----EeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~ 273 (410)
T 2qq6_A 220 RFDIPSSIRFARA-MEPFGLLWL-----EEPTPP--------------------ENLDALAEVRRSTSTPICAGENVYTR 273 (410)
T ss_dssp CCCHHHHHHHHHH-HGGGCCSEE-----ECCSCT--------------------TCHHHHHHHHTTCSSCEEECTTCCSH
T ss_pred CCCHHHHHHHHHH-HhhcCCCeE-----ECCCCh--------------------hhHHHHHHHHhhCCCCEEeCCCcCCH
Confidence 3455665555443 777776544 444221 1256777787765555443 344578
Q ss_pred HHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 178 KKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 178 ~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
..++++++.... +++|+..+-. ..-.++...|+++|+.++..+..
T Consensus 274 ~~~~~~i~~~~~--d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 274 FDFRELFAKRAV--DYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp HHHHHHHHTTCC--SEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred HHHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 999999886543 4676655432 22267889999999998876553
No 55
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=71.13 E-value=59 Score=29.26 Aligned_cols=146 Identities=12% Similarity=0.141 Sum_probs=87.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC----HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs----E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+....+.+.|++.|..--.-++ .+.+ +++++.+ | +++-|..+.. ...+.+...+-++ .|+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~-~l~ 215 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRV-SALREHL--G-----DSFPLMVDAN-MKWTVDGAIRAAR-ALA 215 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHH-HHHHHHH--C-----TTSCEEEECT-TCSCHHHHHHHHH-HHG
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH-HHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHHHH-HHH
Confidence 5677777788889999999874322222 2223 3445432 2 2344555543 3345565555444 377
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-eccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++| ..|... +-++.+.++++.-.|-=++ =+.++...++++++.... ++
T Consensus 216 ~~~i~~i-----EqP~~~--------------------~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~ 268 (371)
T 2ovl_A 216 PFDLHWI-----EEPTIP--------------------DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSL--TL 268 (371)
T ss_dssp GGCCSEE-----ECCSCT--------------------TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCC--SE
T ss_pred hcCCCEE-----ECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC--CE
Confidence 7776654 344211 1246666666654555443 345678999999887654 47
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEe
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~ 221 (327)
+|+..+-. ..-.++..+|+++|+.++..
T Consensus 269 v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 269 PEPDVSNIGGYTTFRKVAALAEANNMLLTSH 299 (371)
T ss_dssp ECCCTTTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCeEccc
Confidence 77665543 22267899999999998874
No 56
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=70.93 E-value=59 Score=29.18 Aligned_cols=147 Identities=16% Similarity=0.149 Sum_probs=86.5
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC-CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhC
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 117 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~ 117 (327)
+.++..+....+.+.|++.|..--.-. ..+.+ +++++. - +++-|.... +...+.+. .+ +-+.|+.++
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v-~avr~a-------~-~~~~l~vDa-n~~~~~~~-~~-~~~~l~~~~ 208 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKIKPGWDYEVL-KAVREA-------F-PEATLTADA-NSAYSLAN-LA-QLKRLDELR 208 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHH-HHHHHH-------C-TTSCEEEEC-TTCCCGGG-HH-HHHGGGGGC
T ss_pred CHHHHHHHHHHHHHhhhheeeeecChhHHHHHH-HHHHHH-------c-CCCeEEEec-CCCCCHHH-HH-HHHHHHhCC
Confidence 456677777888899999876421101 33334 566654 3 343344443 23345566 44 333477777
Q ss_pred CCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeeec
Q 044053 118 MEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQV 196 (327)
Q Consensus 118 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q~ 196 (327)
+++|+ .|.+. +-++.+.+++++-.|. ..|=+-++...+.++++.... +++|+
T Consensus 209 i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~i 261 (369)
T 2zc8_A 209 LDYIE-----QPLAY--------------------DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAG--RVFNV 261 (369)
T ss_dssp CSCEE-----CCSCT--------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC--SEEEE
T ss_pred CcEEE-----CCCCc--------------------ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCC--CEEEE
Confidence 66665 44221 1135566666655554 334455778999999887644 36766
Q ss_pred ccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 197 EMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 197 ~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
..+-. ..-.++...|+++|+.++.-+-+
T Consensus 262 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 262 KPARLGGHGESLRVHALAESAGIPLWMGGML 292 (369)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred chhhhCCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 55432 22267899999999997654444
No 57
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=69.57 E-value=63 Score=28.99 Aligned_cols=151 Identities=14% Similarity=0.048 Sum_probs=90.2
Q ss_pred ChHHHHHHHHHHHH-cCCCEEeCCCCcCC-H--HHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIK-LGYRHFDTAAMYGT-E--KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gi~~~DTA~~Ygs-E--~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+....+.+ .|++.|..--.-++ + ..+=+++++.+ .+++-|..+.. ...+.+...+-++ .|+
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~~-~l~ 212 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV-------GDRASVRVDVN-QGWDEQTASIWIP-RLE 212 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH-------GGGCEEEEECT-TCCCHHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc-------CCCCEEEEECC-CCCCHHHHHHHHH-HHH
Confidence 45666777788888 99999875322222 1 11223444432 23455655643 3345565555444 578
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-EeccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++| ..|.+. +-++.+.+++++-.|-=+ |=+.++...++++++.... ++
T Consensus 213 ~~~i~~i-----EqP~~~--------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~ 265 (370)
T 1nu5_A 213 EAGVELV-----EQPVPR--------------------ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAV--DA 265 (370)
T ss_dssp HHTCCEE-----ECCSCT--------------------TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCC--SE
T ss_pred hcCcceE-----eCCCCc--------------------ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCC--CE
Confidence 8876654 344211 124667777776555433 3345678899999886543 46
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
+|+..+-. ..-.++...|+++|+.++..+.+.
T Consensus 266 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 300 (370)
T 1nu5_A 266 FSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLD 300 (370)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSC
T ss_pred EEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcc
Confidence 76655432 222678999999999999877654
No 58
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=68.44 E-value=16 Score=32.08 Aligned_cols=101 Identities=14% Similarity=0.006 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHHH
Q 044053 104 HVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETI 183 (327)
Q Consensus 104 ~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~ 183 (327)
.-+..+-+.|.++|+++|.+-..-.+... | ...+.++.+..+++...++...+. -+...++++
T Consensus 26 e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p---------------~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a 88 (295)
T 1ydn_A 26 ADKIALINRLSDCGYARIEATSFVSPKWV-P---------------QLADSREVMAGIRRADGVRYSVLV-PNMKGYEAA 88 (295)
T ss_dssp HHHHHHHHHHTTTTCSEEEEEECSCTTTC-G---------------GGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHH
T ss_pred HHHHHHHHHHHHcCcCEEEEccCcCcccc-c---------------cccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHH
Confidence 44556667778899999998754332110 0 012456667777665567766665 456778877
Q ss_pred HHhCCCCCeeeecccCcc--------------cccHHHHHHHHHcCCEEEEec
Q 044053 184 LTFATIPPSINQVEMHPV--------------WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 184 ~~~~~~~~~~~q~~~~~~--------------~~~~~ll~~~~~~gi~v~a~~ 222 (327)
++. +++.+.+-+..|.. ..-.+.+++|+++|+.|.++-
T Consensus 89 ~~~-G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l 140 (295)
T 1ydn_A 89 AAA-HADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYV 140 (295)
T ss_dssp HHT-TCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHC-CCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 774 44422222222211 111567999999999997543
No 59
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=67.18 E-value=75 Score=28.96 Aligned_cols=149 Identities=14% Similarity=0.151 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCC------C-----------cC--C-HHH------HHHHHHHHHhcCCCCCCCcEEEE
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAA------M-----------YG--T-EKA------LGEAIAEALRLGLVSSREQLFIT 92 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~------~-----------Yg--s-E~~------lG~~L~~~~~~g~~~~R~~v~I~ 92 (327)
+.++..+....+.+.|++.|..-. . || . +.. +=+++++.+ | +++-|.
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~--G-----~d~~l~ 222 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAM--G-----DDADII 222 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHH--C-----SSSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhc--C-----CCCEEE
Confidence 567777778888999999987432 2 33 1 111 112333321 2 355555
Q ss_pred eccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 044053 93 SKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL 172 (327)
Q Consensus 93 tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv 172 (327)
.... ..++.+...+-++. |+.++ +.++..|.+. +-++.+.+++++-.|-=++-
T Consensus 223 vDan-~~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~--------------------~~~~~~~~l~~~~~iPIa~d 275 (410)
T 2gl5_A 223 VEIH-SLLGTNSAIQFAKA-IEKYR-----IFLYEEPIHP--------------------LNSDNMQKVSRSTTIPIATG 275 (410)
T ss_dssp EECT-TCSCHHHHHHHHHH-HGGGC-----EEEEECSSCS--------------------SCHHHHHHHHHHCSSCEEEC
T ss_pred EECC-CCCCHHHHHHHHHH-HHhcC-----CCeEECCCCh--------------------hhHHHHHHHHhhCCCCEEec
Confidence 5653 33455555444433 56554 4455655321 12566777777655654433
Q ss_pred -ccccHHHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecC
Q 044053 173 -SNFSCKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 173 -S~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~p 223 (327)
+.++...++++++.... +++|+..+-. ..-.++..+|+++|+.++..+.
T Consensus 276 E~~~~~~~~~~~i~~~~~--d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 276 ERSYTRWGYRELLEKQSI--AVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp TTCCTTHHHHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred CCcCCHHHHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 44568889998876543 4777766543 2236789999999999987655
No 60
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=66.90 E-value=74 Score=28.80 Aligned_cols=150 Identities=13% Similarity=0.096 Sum_probs=90.5
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCc-C-C-HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMY-G-T-EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Y-g-s-E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+....+.+.|++.|..--.- . . .+.+ +++++.+ | +++-|..+.. ..++.+...+-++. |+.
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avr~a~--g-----~d~~l~vDan-~~~~~~~a~~~~~~-l~~ 233 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEI-ANLRQVL--G-----PQAKIAADMH-WNQTPERALELIAE-MQP 233 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHH-HHHHHHH--C-----TTSEEEEECC-SCSCHHHHHHHHHH-HGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHH-HHHHHHh--C-----CCCEEEEECC-CCCCHHHHHHHHHH-Hhh
Confidence 56777777888899999998742110 0 1 2223 3444431 2 3455555653 34455665555544 788
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-ccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~~~ 194 (327)
+++++|. .|.. .+-++.+.++++.-.|-=++- +.++.+.++++++.... +++
T Consensus 234 ~~i~~iE-----qP~~--------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v 286 (388)
T 2nql_A 234 FDPWFAE-----APVW--------------------TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRI--AIV 286 (388)
T ss_dssp GCCSCEE-----CCSC--------------------TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCC--SEE
T ss_pred cCCCEEE-----CCCC--------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEE
Confidence 8877663 3321 113577788887766664444 34578899999876543 466
Q ss_pred ecccCc--ccccHHHHHHHHHcCCEEEEecCCC
Q 044053 195 QVEMHP--VWQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 195 q~~~~~--~~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
|+..+- +..-.++..+|+++|+.++..+.+.
T Consensus 287 ~ik~~~GGit~~~~i~~~A~~~g~~~~~h~~~e 319 (388)
T 2nql_A 287 QPEMGHKGITNFIRIGALAAEHGIDVIPHATVG 319 (388)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHTCEECCCCCSS
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCeEEeecCCC
Confidence 665443 1112678899999999998765443
No 61
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=64.37 E-value=80 Score=28.27 Aligned_cols=150 Identities=18% Similarity=0.229 Sum_probs=86.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHH-HHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVI-PALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~-~~le~SL~ 114 (327)
+.++..+....+.+.|++.|..--.-. ..+.+ +++++.+ | +++-|.-+.. ..++.+... +-++ .|+
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~--g-----~~~~l~vDan-~~~~~~~a~~~~~~-~l~ 210 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRI-EAVRERV--G-----NDIAIRVDVN-QGWKNSANTLTALR-SLG 210 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHHHH--C-----TTSEEEEECT-TTTBSHHHHHHHHH-TST
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHH-HHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HHH
Confidence 456677777888899999988521111 12223 3444431 2 3455555542 233444444 3333 355
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-eccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++| ..|.+ .+-++.+.++++.-.|-=++ =+.++...++++++.... ++
T Consensus 211 ~~~i~~i-----EqP~~--------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~ 263 (369)
T 2p8b_A 211 HLNIDWI-----EQPVI--------------------ADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAA--DK 263 (369)
T ss_dssp TSCCSCE-----ECCBC--------------------TTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCC--SE
T ss_pred hCCCcEE-----ECCCC--------------------cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCC--CE
Confidence 5555544 34421 11256777888776665443 344678899999887644 36
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
+|+..+-. ..-.++...|+++|+.++..+.+.
T Consensus 264 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 264 VNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred EEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCc
Confidence 66654432 122678999999999998776553
No 62
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=63.97 E-value=80 Score=28.14 Aligned_cols=146 Identities=13% Similarity=0.107 Sum_probs=89.5
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC----HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs----E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+....+.+.|++.|..--.-++ .+.+ +++++.+ | +++-|..+.. ...+.+...+-++. |+
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~--g-----~~~~l~vDan-~~~~~~~a~~~~~~-l~ 213 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVV-RSIRQAV--G-----DDFGIMVDYN-QSLDVPAAIKRSQA-LQ 213 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHH-HHHHHHH--C-----SSSEEEEECT-TCSCHHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHh--C-----CCCEEEEECC-CCCCHHHHHHHHHH-HH
Confidence 4566667778888999999885221122 2222 3444431 2 3455666653 33455665555444 78
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-ccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++|. .|.+ .+-++.+.++++.-.|-=++- +.++...++++++.... ++
T Consensus 214 ~~~i~~iE-----~P~~--------------------~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~--d~ 266 (359)
T 1mdl_A 214 QEGVTWIE-----EPTL--------------------QHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGAC--RL 266 (359)
T ss_dssp HHTCSCEE-----CCSC--------------------TTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCC--SE
T ss_pred HhCCCeEE-----CCCC--------------------hhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC--CE
Confidence 88887663 3321 012577778887766664443 44578899999886543 47
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEe
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~ 221 (327)
+|+..+-. ..-.++..+|+++|+.++..
T Consensus 267 v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 267 AMPDAMKIGGVTGWIRASALAQQFGIPMSSH 297 (359)
T ss_dssp ECCBTTTTTHHHHHHHHHHHHHHTTCCBCCB
T ss_pred EeecchhhCCHHHHHHHHHHHHHcCCeEeec
Confidence 77766553 22267899999999987764
No 63
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=63.01 E-value=20 Score=33.81 Aligned_cols=127 Identities=15% Similarity=0.083 Sum_probs=83.7
Q ss_pred HHHHHHHcCCCEEe--CCCCcC----------CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHH-------
Q 044053 46 AVLEAIKLGYRHFD--TAAMYG----------TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVI------- 106 (327)
Q Consensus 46 ~l~~A~~~Gi~~~D--TA~~Yg----------sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~------- 106 (327)
-++..-+.|+..+= ||..|- .-+.+..+-++.+... -+.++||++-++.-.. .+-.
T Consensus 117 ~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~---L~G~~~lTaGLGGMgG--AQplA~~mag~ 191 (557)
T 1uwk_A 117 HFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGGS---LKGKWVLTAGLGGMGG--AQPLAATLAGA 191 (557)
T ss_dssp HHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSSC---CTTCEEEEECCSTTTT--HHHHHHHHTTC
T ss_pred HHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCC---CCceEEEEecCCccch--hhHHHHHHcCc
Confidence 46777788988653 555542 2233444444543322 5788999999865321 1100
Q ss_pred ----H--HHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHH
Q 044053 107 ----P--ALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKI 180 (327)
Q Consensus 107 ----~--~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l 180 (327)
. .-.+.-+|+.+.|+|.+ ..+++++++..++.+++|+..+||+-..-++.+
T Consensus 192 v~i~~Evd~~ri~~R~~~gyld~~-----------------------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~ 248 (557)
T 1uwk_A 192 CSLNIESQQSRIDFRLETRYVDEQ-----------------------ATDLDDALVRIAKYTAEGKAISIALHGNAAEIL 248 (557)
T ss_dssp EEEEEESCHHHHHHHHHTTSCCEE-----------------------CSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHH
T ss_pred eEEEEEECHHHHHHHHhCCCceeE-----------------------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHH
Confidence 0 11233467888999965 224899999999999999999999999989999
Q ss_pred HHHHHhC-CCCCeeeecccCc
Q 044053 181 ETILTFA-TIPPSINQVEMHP 200 (327)
Q Consensus 181 ~~~~~~~-~~~~~~~q~~~~~ 200 (327)
+++++.. .+++..-|...|-
T Consensus 249 ~~l~~~~i~~DlvtDQTSaHd 269 (557)
T 1uwk_A 249 PELVKRGVRPDMVTDQTSAHD 269 (557)
T ss_dssp HHHHHHTCCCSEECCCSCTTC
T ss_pred HHHHHCCCCCCCCCCCccccC
Confidence 9998874 2344456777653
No 64
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=62.74 E-value=90 Score=28.29 Aligned_cols=150 Identities=12% Similarity=0.073 Sum_probs=90.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC-H--HHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT-E--KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs-E--~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+.++.+++.|++.|-.=-.-.. + ...=+++++. - +++-|..... ...+.+...+ +-+.|+.
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-------~-~~~~l~vDan-~~~~~~~A~~-~~~~L~~ 217 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARD-------F-PEFRVRVDYN-QGLEIDEAVP-RVLDVAQ 217 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHH-------C-TTSEEEEECT-TCCCGGGHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHh-------C-CCCeEEEECC-CCCCHHHHHH-HHHHHHh
Confidence 4556666677888899998864322211 1 1222455554 4 5556666643 2344555443 3346677
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
+++++|. .|.+. +-++.+.+++++-.|. ..|=+.++...+.++++.... +++
T Consensus 218 ~~i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--d~v 270 (385)
T 3i6e_A 218 FQPDFIE-----QPVRA--------------------HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGIC--DGV 270 (385)
T ss_dssp TCCSCEE-----CCSCT--------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCC--SEE
T ss_pred cCCCEEE-----CCCCc--------------------ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEE
Confidence 7766664 44221 1246777787765554 455567889999999887644 367
Q ss_pred ecccCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 195 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 195 q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
|+...-. ..-.++...|+++|+.++..+.+.
T Consensus 271 ~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~e 304 (385)
T 3i6e_A 271 SIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFE 304 (385)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSC
T ss_pred EecccccCCHHHHHHHHHHHHHcCCEEEeCCCCc
Confidence 6665433 222678999999999997755554
No 65
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=62.13 E-value=84 Score=28.65 Aligned_cols=148 Identities=13% Similarity=0.081 Sum_probs=87.9
Q ss_pred ChHHHHHHH-HHHHHcCCCEEeCCCCc-------CCHHH--HHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHH
Q 044053 39 DTDALKLAV-LEAIKLGYRHFDTAAMY-------GTEKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPA 108 (327)
Q Consensus 39 ~~~~~~~~l-~~A~~~Gi~~~DTA~~Y-------gsE~~--lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~ 108 (327)
+.++..+.+ +.+++.|++.|-.=-.. .-+.. .=+++++.+ | +++-|..... ...+.+...+
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~--g-----~~~~l~vDaN-~~~~~~~A~~- 209 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELL--G-----PDAVIGFDAN-NGYSVGGAIR- 209 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHH--C-----TTCCEEEECT-TCCCHHHHHH-
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCCHHHHHH-
Confidence 466777777 88889999998643211 11111 223455432 2 3344444542 2344444333
Q ss_pred HHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhC
Q 044053 109 LKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFA 187 (327)
Q Consensus 109 le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~ 187 (327)
+-+.|+.+++++|. .|.+. +-++.+.+++++-.|. ..|=+.++...++++++..
T Consensus 210 ~~~~L~~~~i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 264 (393)
T 4dwd_A 210 VGRALEDLGYSWFE-----EPVQH--------------------YHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG 264 (393)
T ss_dssp HHHHHHHTTCSEEE-----CCSCT--------------------TCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT
T ss_pred HHHHHHhhCCCEEE-----CCCCc--------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC
Confidence 23456777766554 44221 1246677777765554 3344567888999988876
Q ss_pred CCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecC
Q 044053 188 TIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 188 ~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~p 223 (327)
. +++|+...-+ ..-.++...|+++|+.++..+.
T Consensus 265 -~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 265 -V--RMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp -C--CEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred -C--CEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 4 4777776554 2236789999999999987665
No 66
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=61.97 E-value=58 Score=29.98 Aligned_cols=149 Identities=19% Similarity=0.203 Sum_probs=89.2
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCCCcCC-------HHH--HHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHH
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAAMYGT-------EKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPA 108 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs-------E~~--lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~ 108 (327)
.+.++..+..+.+.+.|++.|..--..|. +.. +=+++++. --+++-|..... ...+.+...+-
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avRea-------vG~d~~L~vDaN-~~~~~~~Ai~~ 249 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREV-------IGYDNDLMLECY-MGWNLDYAKRM 249 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHH-------HCSSSEEEEECT-TCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHH-------cCCCCeEEEECC-CCCCHHHHHHH
Confidence 35677788888899999999875433320 111 12344443 123455555643 23444444332
Q ss_pred HHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhC
Q 044053 109 LKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFA 187 (327)
Q Consensus 109 le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~ 187 (327)
-+.|+.+++++| ..|.+. +-++.+.+++++-.|. ..|=+.++...++++++..
T Consensus 250 -~~~Le~~~i~~i-----EeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~ 303 (412)
T 3stp_A 250 -LPKLAPYEPRWL-----EEPVIA--------------------DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRK 303 (412)
T ss_dssp -HHHHGGGCCSEE-----ECCSCT--------------------TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred -HHHHHhcCCCEE-----ECCCCc--------------------ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcC
Confidence 345666766555 444321 1246778888876665 3445667899999998865
Q ss_pred CCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEec
Q 044053 188 TIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 188 ~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~ 222 (327)
.. +++|+...-+ ..-.++...|+++|+.++..+
T Consensus 304 a~--D~v~ik~~~~GGit~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 304 AV--SVLQYDTNRVGGITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp CC--SEECCCHHHHTHHHHHHHHHHHHHHHTCCBCCSS
T ss_pred CC--CEEecChhhcCCHHHHHHHHHHHHHcCCEEEecc
Confidence 44 4777665443 122678999999999987654
No 67
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=61.45 E-value=98 Score=28.31 Aligned_cols=150 Identities=15% Similarity=0.133 Sum_probs=90.6
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCCCc--C---CHH------HHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHH
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAAMY--G---TEK------ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVI 106 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Y--g---sE~------~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~ 106 (327)
.+.++..+.++.+++.|++.|-.-... + ... .+=+++++. --+++-|..... ...+.+...
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~a-------vG~d~~L~vDaN-~~~~~~~A~ 195 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSA-------FGNTVEFGLDFH-GRVSAPMAK 195 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHT-------TGGGSEEEEECC-SCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHH-------hCCCceEEEECC-CCCCHHHHH
Confidence 456778888889999999999761110 0 111 112344432 224555555542 233444433
Q ss_pred HHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccE-EEeccccHHHHHHHHH
Q 044053 107 PALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKS-IGLSNFSCKKIETILT 185 (327)
Q Consensus 107 ~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~-iGvS~~~~~~l~~~~~ 185 (327)
+ +-+.|+.+++++|. .|.+. +-++.+.++++.-.|-= .|=+.++...++++++
T Consensus 196 ~-~~~~L~~~~i~~iE-----eP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~ 249 (405)
T 3rr1_A 196 V-LIKELEPYRPLFIE-----EPVLA--------------------EQAETYARLAAHTHLPIAAGERMFSRFDFKRVLE 249 (405)
T ss_dssp H-HHHHHGGGCCSCEE-----CSSCC--------------------SSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHH
T ss_pred H-HHHHHHhcCCCEEE-----CCCCc--------------------ccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHH
Confidence 3 23456777766554 45321 11366778887766653 3446678899999988
Q ss_pred hCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecC
Q 044053 186 FATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 186 ~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~p 223 (327)
.... +++|+...-+ ..-..+...|+++|+.++..+.
T Consensus 250 ~~a~--d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 250 AGGV--SILQPDLSHAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp HCCC--SEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred HhCC--CeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 7654 4777766554 2236799999999999987654
No 68
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=61.36 E-value=75 Score=28.75 Aligned_cols=152 Identities=9% Similarity=0.102 Sum_probs=89.3
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhC
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 117 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~ 117 (327)
.+.++..+.++.+.+.|++.|..--.-.-+..+ +.++.. ++. --+++-|..+.. ...+.+...+- -+.|+.++
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~iKiK~G~~~~~d~-~~v~av-R~a---~g~~~~l~vDan-~~~~~~~a~~~-~~~l~~~~ 216 (378)
T 3eez_A 144 KSVEETRAVIDRYRQRGYVAHSVKIGGDVERDI-ARIRDV-EDI---REPGEIVLYDVN-RGWTRQQALRV-MRATEDLH 216 (378)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSCHHHHH-HHHHHH-TTS---CCTTCEEEEECT-TCCCHHHHHHH-HHHTGGGT
T ss_pred CCHHHHHHHHHHHHhCCCCEEEeccCCCHHHHH-HHHHHH-HHH---cCCCceEEEECC-CCCCHHHHHHH-HHHhccCC
Confidence 456777778888899999999853221112222 222221 111 224566777753 23444433322 23344444
Q ss_pred CCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeeec
Q 044053 118 MEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQV 196 (327)
Q Consensus 118 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q~ 196 (327)
+ ++..|.+ -++.+.++++.-.|. ..|=+.++...++++++.... +++|+
T Consensus 217 -----i-~iEqP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~i 266 (378)
T 3eez_A 217 -----V-MFEQPGE----------------------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLA--EVFGI 266 (378)
T ss_dssp -----C-CEECCSS----------------------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCC--SEEEE
T ss_pred -----e-EEecCCC----------------------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCC--CEEEe
Confidence 4 4454421 246677777776655 344566788999999886544 46766
Q ss_pred ccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 197 EMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 197 ~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
...-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 267 k~~~~GGit~~~~ia~~A~~~g~~~~~~~~~es 299 (378)
T 3eez_A 267 KLNRVGGLTRAARMRDIALTHGIDMFVMATGGS 299 (378)
T ss_dssp EHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CchhcCCHHHHHHHHHHHHHcCCEEEcCCCCCC
Confidence 65433 2226789999999999998776654
No 69
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=60.89 E-value=11 Score=26.35 Aligned_cols=58 Identities=10% Similarity=0.167 Sum_probs=41.1
Q ss_pred HHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEec
Q 044053 158 MEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 158 l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~ 222 (327)
++.+++.||+. ....+..++++......+++--..++ .....+..+|+++||+++-+.
T Consensus 3 ~~~~~kagk~~------~G~~~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSII------IGTKQTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEE------ESHHHHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCee------EcHHHHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 56788888865 23567777777766666666656665 334678889999999998764
No 70
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=60.21 E-value=98 Score=27.90 Aligned_cols=150 Identities=15% Similarity=0.083 Sum_probs=88.9
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC-CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhC
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 117 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~ 117 (327)
+.++..+....+.+.|++.|..- .| .-+..-+.++.. ++.+ . ++-|..+.. ...+.+...+-+ +.|+.++
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~e~v~av-r~a~--g--d~~l~vD~n-~~~~~~~a~~~~-~~l~~~~ 217 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLK--VGRGEKLDLEITAAV-RGEI--G--DARLRLDAN-EGWSVHDAINMC-RKLEKYD 217 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE--CCSCHHHHHHHHHHH-HTTS--T--TCEEEEECT-TCCCHHHHHHHH-HHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--cCCCHHHHHHHHHHH-HHHc--C--CcEEEEecC-CCCCHHHHHHHH-HHHHhcC
Confidence 45667777788889999999852 22 211111222221 1121 2 555655642 344555554443 3677777
Q ss_pred CCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEec-cccHHHHHHHHHhCCCCCeeeec
Q 044053 118 MEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLS-NFSCKKIETILTFATIPPSINQV 196 (327)
Q Consensus 118 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS-~~~~~~l~~~~~~~~~~~~~~q~ 196 (327)
+++|. .|.+ .+-|+.+.++++.-.|-=++-- .++...++++++.... +++|+
T Consensus 218 i~~iE-----qP~~--------------------~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~--d~v~i 270 (384)
T 2pgw_A 218 IEFIE-----QPTV--------------------SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAA--DMICI 270 (384)
T ss_dssp CSEEE-----CCSC--------------------TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCC--SEEEE
T ss_pred CCEEe-----CCCC--------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEEE
Confidence 76654 3321 1125667777776566555443 4578899999886544 46666
Q ss_pred ccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 197 EMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 197 ~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
..+-. ..-.++..+|+++|+.++..+.+
T Consensus 271 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 301 (384)
T 2pgw_A 271 GPREIGGIQPMMKAAAVAEAAGLKICIHSSF 301 (384)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCCEEECCCS
T ss_pred cchhhCCHHHHHHHHHHHHHCCCeEeeccCc
Confidence 55432 22267899999999999887544
No 71
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=60.19 E-value=32 Score=28.10 Aligned_cols=66 Identities=17% Similarity=0.155 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHHcC-CccEEEecccc--HHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEE
Q 044053 150 DYRGVWEAMEESQMLG-LTKSIGLSNFS--CKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 150 ~~~~~~~~l~~l~~~G-kir~iGvS~~~--~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a 220 (327)
+..+++++|..+++.+ ||--+|..|.. ...+.+++. . .+.+..|+-...-...+..+++.|+.++.
T Consensus 79 s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~---~--~i~~~~~~~~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 79 TRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLG---V--KIKEFLFSSEDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp CHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHT---C--EEEEEEECSGGGHHHHHHHHHHTTCCEEE
T ss_pred CHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhC---C--ceEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 4788999999999974 57777777764 445555553 2 36666666555557899999999999976
No 72
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=59.61 E-value=97 Score=27.66 Aligned_cols=152 Identities=13% Similarity=0.160 Sum_probs=89.1
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC----HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs----E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+....+.+.|++.|..--.-++ .+.+ +++++.+ | +++-|..+.. ..++.+...+-++. |+
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v-~avr~a~--g-----~~~~l~vDan-~~~~~~~a~~~~~~-l~ 209 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARI-QEIRKRV--G-----SAVKLRLDAN-QGWRPKEAVTAIRK-ME 209 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHH-HHHHHHH--C-----SSSEEEEECT-TCSCHHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHH-HHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHHHHH-Hh
Confidence 4566677778888999999875221112 2223 3444431 2 3455666653 33455555544443 66
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-EeccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
..+ .++.++..|.+. +-++.+.+++++-.|-=. |=+.++...+.++++.... ++
T Consensus 210 ~~~---~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~ 264 (366)
T 1tkk_A 210 DAG---LGIELVEQPVHK--------------------DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSA--DL 264 (366)
T ss_dssp HTT---CCEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCC--SE
T ss_pred hcC---CCceEEECCCCc--------------------ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCC--CE
Confidence 611 244455655321 124666777766555433 4455778899999886644 46
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
+|+..+-. ..-.++...|+++|+.++..+.+.
T Consensus 265 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 265 INIKLMKAGGISGAEKINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSC
T ss_pred EEeehhhhcCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 66655432 222678999999999998876653
No 73
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=59.59 E-value=1e+02 Score=27.97 Aligned_cols=149 Identities=14% Similarity=0.104 Sum_probs=90.2
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCC------Cc------C---C-------HHHHHHHHHHHHhcCCCCCCCcEEEEeccC
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAA------MY------G---T-------EKALGEAIAEALRLGLVSSREQLFITSKLW 96 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~------~Y------g---s-------E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~ 96 (327)
+.++..+....+.+.|++.|-.-. .| + + .+.| +++++.+ | +++-|.....
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v-~avR~a~--G-----~d~~l~vDan 223 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRM-AAIRDAV--G-----PDVDIIAEMH 223 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHH-HHHHHHH--C-----TTSEEEEECT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHH-HHHHHhc--C-----CCCEEEEECC
Confidence 567777778888999999987432 23 0 1 1112 2333321 2 3555666653
Q ss_pred CCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-ccc
Q 044053 97 CQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNF 175 (327)
Q Consensus 97 ~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv-S~~ 175 (327)
...+.+...+-++. |+.+++++|. .|... +-++.+.++++.-.|-=++- +.+
T Consensus 224 -~~~~~~~a~~~~~~-l~~~~i~~iE-----~P~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~ 276 (407)
T 2o56_A 224 -AFTDTTSAIQFGRM-IEELGIFYYE-----EPVMP--------------------LNPAQMKQVADKVNIPLAAGERIY 276 (407)
T ss_dssp -TCSCHHHHHHHHHH-HGGGCCSCEE-----CSSCS--------------------SSHHHHHHHHHHCCSCEEECTTCC
T ss_pred -CCCCHHHHHHHHHH-HHhcCCCEEe-----CCCCh--------------------hhHHHHHHHHHhCCCCEEeCCCcC
Confidence 34456666555554 7777776654 44211 12566777777655654443 345
Q ss_pred cHHHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 176 SCKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 176 ~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
+...++++++.... +++|+..+-. ..-.++..+|+++|+.++..+..
T Consensus 277 ~~~~~~~~i~~~~~--d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 277 WRWGYRPFLENGSL--SVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred CHHHHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 68888988876543 4777766543 22367899999999999876554
No 74
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=59.43 E-value=20 Score=33.78 Aligned_cols=128 Identities=15% Similarity=0.088 Sum_probs=72.0
Q ss_pred HHHHHHcCCCEEe--CCCCcC----------CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCC-hh--------h-
Q 044053 47 VLEAIKLGYRHFD--TAAMYG----------TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAH-RD--------H- 104 (327)
Q Consensus 47 l~~A~~~Gi~~~D--TA~~Yg----------sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~-~~--------~- 104 (327)
+++.-+.|+..+= ||..|- .-+.+..+-++.+... -+.++||++-++.-... |. .
T Consensus 113 f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~---L~G~~~lTaGLGGMgGAQplA~~mag~v~i 189 (551)
T 1x87_A 113 FHELDKKGLIMYGQMTAGSWIYIGSQGIVQGTYETFAEVARQHFGGT---LAGTITLTAGLGGMGGAQPLAVTMNGGVCL 189 (551)
T ss_dssp -----------------CCSCCCTTHHHHHHHHHHHHHHHHHHSTTC---CTTCEEEEECCSTTGGGHHHHHHHTTCEEE
T ss_pred HHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCC---CCceEEEEecCCccchhhHHHHHHcCceEE
Confidence 3444555666442 454442 2333444444443322 57889999988643210 00 0
Q ss_pred -HHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHHH
Q 044053 105 -VIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETI 183 (327)
Q Consensus 105 -i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~ 183 (327)
++-.-.+.-+|+.+.|+|.+ ..+++++++..++.+++|+..+||+-..-++.++++
T Consensus 190 ~~Evd~~ri~~R~~~gyld~~-----------------------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l 246 (551)
T 1x87_A 190 AIEVDPARIQRRIDTNYLDTM-----------------------TDSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRL 246 (551)
T ss_dssp EEESCHHHHHHHHHTTSCSEE-----------------------ESCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHH
T ss_pred EEEECHHHHHHHHhCCCceeE-----------------------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHH
Confidence 00011233467888999975 124889999999999999999999999989999999
Q ss_pred HHhCC-CCCeeeecccCc
Q 044053 184 LTFAT-IPPSINQVEMHP 200 (327)
Q Consensus 184 ~~~~~-~~~~~~q~~~~~ 200 (327)
++..- +++..-|...|-
T Consensus 247 ~~~~i~~DlvtDQTSaHd 264 (551)
T 1x87_A 247 VETGFVPDVLTDQTSAHD 264 (551)
T ss_dssp HHTTCCCSEECCCSCTTC
T ss_pred HHCCCCCCCCCCCccccC
Confidence 88632 344455777653
No 75
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=58.79 E-value=77 Score=28.36 Aligned_cols=151 Identities=13% Similarity=0.127 Sum_probs=87.5
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHh
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 116 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg--sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL 116 (327)
+.++..+..+.+++.|++.|..=-.-. .+...=+++++.+ | +++-|..... ...+.+...+ +-+.|+.+
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~~~~d~~~v~avR~~~--g-----~~~~l~vDan-~~~~~~~a~~-~~~~l~~~ 210 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGDEEQDFERLRRLHETL--A-----GRAVVRVDPN-QSYDRDGLLR-LDRLVQEL 210 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH--T-----TSSEEEEECT-TCCCHHHHHH-HHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHHh--C-----CCCEEEEeCC-CCCCHHHHHH-HHHHHHhc
Confidence 567777778888999999987532211 1111223555432 2 3445555542 2344444332 33567777
Q ss_pred CCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhC-CCCCeee
Q 044053 117 QMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFA-TIPPSIN 194 (327)
Q Consensus 117 ~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~-~~~~~~~ 194 (327)
++++|. .|.+. +-++.+.+++++-.|. ..|=+.++...+.++++.. .. +++
T Consensus 211 ~i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~--d~v 263 (356)
T 3ro6_B 211 GIEFIE-----QPFPA--------------------GRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAAC--GIF 263 (356)
T ss_dssp TCCCEE-----CCSCT--------------------TCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSC--SEE
T ss_pred CCCEEE-----CCCCC--------------------CcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcC--CEE
Confidence 777765 34221 1234555555443333 4455667888888888754 33 467
Q ss_pred ecccCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 195 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 195 q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
|+..+-. ..-.++...|+++|+.++..+.+.
T Consensus 264 ~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~e 297 (356)
T 3ro6_B 264 NIKLMKCGGLAPARRIATIAETAGIDLMWGCMDE 297 (356)
T ss_dssp EECHHHHCSHHHHHHHHHHHHHHTCEEEECCCSC
T ss_pred EEcccccCCHHHHHHHHHHHHHcCCEEEecCCcc
Confidence 6665433 222678999999999998866554
No 76
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=57.76 E-value=20 Score=33.81 Aligned_cols=127 Identities=19% Similarity=0.148 Sum_probs=83.3
Q ss_pred HHHHHHHcCCCEEe--CCCCcC----------CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHH-------
Q 044053 46 AVLEAIKLGYRHFD--TAAMYG----------TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVI------- 106 (327)
Q Consensus 46 ~l~~A~~~Gi~~~D--TA~~Yg----------sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~------- 106 (327)
-+++.-+.|+..+= ||..|- .-+.+..+-++.+... -+.++||++-++.-.. .+-.
T Consensus 113 ~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~---L~G~~~lTaGLGGMgG--AQplA~~mag~ 187 (552)
T 2fkn_A 113 HFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGS---LKGTLTLTAGLGGMGG--AQPLSVTMNEG 187 (552)
T ss_dssp HHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSSC---CTTCEEEEECCSTTTT--HHHHHHHHTTC
T ss_pred HHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCC---CCceEEEEecCCccch--hhHHHHHHcCc
Confidence 46777788988653 555542 2233444444443222 5788999999865321 1100
Q ss_pred ----H--HHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHH
Q 044053 107 ----P--ALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKI 180 (327)
Q Consensus 107 ----~--~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l 180 (327)
. .-.+.-+|+.+.|+|.+ ..+++++++..++.+++|+..+||+-..-++.+
T Consensus 188 v~i~~Evd~~ri~~R~~~gyld~~-----------------------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~ 244 (552)
T 2fkn_A 188 VVIAVEVDEKRIDKRIETKYCDRK-----------------------TASIEEALAWAEEAKLAGKPLSIALLGNAAEVH 244 (552)
T ss_dssp EEEEEESCHHHHHHHHHTTSCSEE-----------------------ESCHHHHHHHHHHHHHTTCCEEEEEESCHHHHH
T ss_pred eEEEEEECHHHHHHHHhCCcceeE-----------------------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHH
Confidence 0 11233477888999975 124889999999999999999999999889999
Q ss_pred HHHHHhCC-CCCeeeecccCc
Q 044053 181 ETILTFAT-IPPSINQVEMHP 200 (327)
Q Consensus 181 ~~~~~~~~-~~~~~~q~~~~~ 200 (327)
+++++..- +++..-|...|-
T Consensus 245 ~~l~~~~i~~DlvtDQTSaHd 265 (552)
T 2fkn_A 245 HTLLNRGVKIDIVTDQTSAHD 265 (552)
T ss_dssp HHHHTTTCCCSEECCCSCTTC
T ss_pred HHHHHCCCCCCCCCCCccccC
Confidence 99988632 344455777653
No 77
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=57.14 E-value=1.1e+02 Score=27.62 Aligned_cols=149 Identities=13% Similarity=0.136 Sum_probs=89.4
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCCCcCC-H---HHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAAMYGT-E---KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSL 113 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs-E---~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL 113 (327)
.+.++..+....+.+.|++.|..-....+ + +.| +++++.+ | +++-|..+.. ..++.+...+-++. |
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~~-l 217 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFV-EKVREIV--G-----DELPLMLDLA-VPEDLDQTKSFLKE-V 217 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHH-HHHHHHH--C-----SSSCEEEECC-CCSCHHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHH-HHHHHHh--C-----CCCEEEEEcC-CCCCHHHHHHHHHH-H
Confidence 35677777788889999998874321111 2 222 2344421 2 2444555543 33455665555444 7
Q ss_pred HHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-eccccHHHHHHHHHhCCCCCe
Q 044053 114 SALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSCKKIETILTFATIPPS 192 (327)
Q Consensus 114 ~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~~~~~ 192 (327)
+.+++++|. .|.+. +-++.+.++++.-.|-=++ =+.++...++++++.... +
T Consensus 218 ~~~~i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d 270 (391)
T 2qgy_A 218 SSFNPYWIE-----EPVDG--------------------ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAA--D 270 (391)
T ss_dssp GGGCCSEEE-----CSSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--S
T ss_pred HhcCCCeEe-----CCCCh--------------------hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC--C
Confidence 777776543 44210 1256677777765555443 344678899999886543 4
Q ss_pred eeecccCcc---cccHHHHHHHHHcCCEEEEecC
Q 044053 193 INQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 193 ~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~p 223 (327)
++|+..+-. ..-.++..+|+++|+.++..+.
T Consensus 271 ~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 271 IFNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp EECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred EEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 777665543 2226789999999999987654
No 78
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=55.84 E-value=1.1e+02 Score=27.31 Aligned_cols=152 Identities=6% Similarity=-0.041 Sum_probs=87.8
Q ss_pred ChHHHHHHHHHHHHc-CCCEEeCCCCcCCH---HHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKL-GYRHFDTAAMYGTE---KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gi~~~DTA~~YgsE---~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+..+.+++. |++.|-.=-....+ ...=+++++.+ -+++-|.... +...+.+...+ +-+.|+
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~-------g~~~~l~vDa-n~~~~~~~a~~-~~~~l~ 209 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERF-------GDAIELYVDG-NRGWSAAESLR-AMREMA 209 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHH-------GGGSEEEEEC-TTCSCHHHHHH-HHHHTT
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHh-------CCCCEEEEEC-CCCCCHHHHHH-HHHHHH
Confidence 567777778888888 99988543221111 11224555532 2344455554 23334433322 223444
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++ +..|.+. +-++.+.++++.-.|. ..|=+.++...+.++++....+ +
T Consensus 210 ~~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~ 262 (367)
T 3dg3_A 210 DLDLLF-----AEELCPA--------------------DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSAT--A 262 (367)
T ss_dssp TSCCSC-----EESCSCT--------------------TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCS--E
T ss_pred HhCCCE-----EECCCCc--------------------ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCC--E
Confidence 455444 4455321 1246667777765555 3455667889999988876544 6
Q ss_pred eecccCcc--cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 194 NQVEMHPV--WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 194 ~q~~~~~~--~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+|+...-. ..-.++...|+++|+.++..+.+.+
T Consensus 263 v~~k~~~~Git~~~~ia~~A~~~gi~~~~~~~~es 297 (367)
T 3dg3_A 263 ISIKTARTGFTGSTRVHHLAEGLGLDMVMGNQIDG 297 (367)
T ss_dssp EEECHHHHTTHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EEeehhhhhHHHHHHHHHHHHHcCCeEEECCcCCc
Confidence 77665543 1226789999999999988765543
No 79
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=55.81 E-value=1.2e+02 Score=27.50 Aligned_cols=149 Identities=10% Similarity=0.058 Sum_probs=89.7
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCCCcCCHH--HHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAAMYGTEK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~--~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
.+.++..+.++.+.+.|++.|..=-.-.-+. .+=+++++.+ -+++-|..+.. ...+.+...+ +-+.|+.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~-------g~d~~l~vDan-~~~~~~~A~~-~~~~l~~ 220 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRV-------GADVEILVDAN-QSLGRHDALA-MLRILDE 220 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCCCHHHHHH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHc-------CCCceEEEECC-CCcCHHHHHH-HHHHHHh
Confidence 4677788888899999999998532112111 1223455431 23455565643 2344444433 3345677
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HcCCcc-EEEeccccHHHHHHHHHhCCCCCee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQ-MLGLTK-SIGLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
+++++|. .|.+. +-++.+.+++ +.-.|- ..|=+-++...++++++.... ++
T Consensus 221 ~~i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~--d~ 273 (389)
T 3ozy_A 221 AGCYWFE-----EPLSI--------------------DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAI--DV 273 (389)
T ss_dssp TTCSEEE-----SCSCT--------------------TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCC--SE
T ss_pred cCCCEEE-----CCCCc--------------------ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCC--CE
Confidence 7766653 44221 1246677787 665554 333455678888888886544 47
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEec
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~ 222 (327)
+|+....+ ..-.++..+|+++|+.++..+
T Consensus 274 v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 274 LQADASRAGGITEALAISASAASAHLAWNPHT 305 (389)
T ss_dssp ECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 77766554 222679999999999998763
No 80
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=55.02 E-value=52 Score=23.50 Aligned_cols=61 Identities=10% Similarity=0.054 Sum_probs=42.9
Q ss_pred HHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 154 VWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 154 ~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
+..+|....+.|++. ....+..++++......+++--.. +-.....+..+|++++|+++.|
T Consensus 3 i~~~L~la~kagk~v------~G~~~v~kai~~gka~lViiA~D~-~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 3 LAFELRKAMETGKVV------LGSNETIRLAKTGGAKLIIVAKNA-PKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHHSSCEE------ESHHHHHHHHHHTCCSEEEEECCC-CHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCEe------ECHHHHHHHHHcCCccEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEe
Confidence 456778888888865 245677778887776666655442 3233367888999999998777
No 81
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=54.88 E-value=1.2e+02 Score=27.34 Aligned_cols=152 Identities=12% Similarity=0.122 Sum_probs=89.6
Q ss_pred ChHHHHHHHHHHHHc-CCCEEeCCCCc-CCHHH--HHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKL-GYRHFDTAAMY-GTEKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gi~~~DTA~~Y-gsE~~--lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+....+++. |++.|-.=-.- .-+.. +=+++++. -.+++-|..... ...+.+...+ +-+.|+
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-------~g~~~~l~vDan-~~~~~~~A~~-~~~~l~ 218 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELARE-------VGDRVSLRIDIN-ARWDRRTALH-YLPILA 218 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHT-------TTTTSEEEEECT-TCSCHHHHHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHH-------cCCCCEEEEECC-CCCCHHHHHH-HHHHHH
Confidence 456666667777887 99998643221 11221 22345542 234556666653 2344444432 335677
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++|. .|.+. +-++.+.++++.-.|. ..|=+.++...+.++++.... ++
T Consensus 219 ~~~i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~ 271 (383)
T 3i4k_A 219 EAGVELFE-----QPTPA--------------------DDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAA--DV 271 (383)
T ss_dssp HTTCCEEE-----SCSCT--------------------TCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCC--SE
T ss_pred hcCCCEEE-----CCCCh--------------------hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCC--CE
Confidence 77766554 44221 1235566666653443 345566788999999887644 47
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+|+....+ ..-.++...|+++|+.++..+.+.+
T Consensus 272 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 307 (383)
T 3i4k_A 272 IALKTTKHGGLLESKKIAAIAEAGGLACHGATSLEG 307 (383)
T ss_dssp EEECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCC
T ss_pred EEEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCcc
Confidence 77776554 2236789999999999987666543
No 82
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=54.62 E-value=45 Score=29.86 Aligned_cols=104 Identities=11% Similarity=0.069 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHhCCCceeEEEee-cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCccEEEec--cc-cHHH
Q 044053 105 VIPALKKSLSALQMEYLDLYLVH-LPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQML-GLTKSIGLS--NF-SCKK 179 (327)
Q Consensus 105 i~~~le~SL~rL~~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-Gkir~iGvS--~~-~~~~ 179 (327)
-+..+-+.|.++|+|+|.+=+.- ||.. ++. . .......|+.++++++. ..++...+. +. ....
T Consensus 31 ~k~~i~~~L~~~Gvd~IEvG~~~g~p~s-sp~----------~-g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~ 98 (345)
T 1nvm_A 31 DVRAIARALDKAKVDSIEVAHGDGLQGS-SFN----------Y-GFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHD 98 (345)
T ss_dssp HHHHHHHHHHHHTCSEEECSCTTSTTCC-BTT----------T-BCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCC-CCc----------c-cCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHH
Confidence 34445556777999888873111 2211 000 0 00112345666666665 245555552 22 3666
Q ss_pred HHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 180 IETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 180 l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
++++.+. +++...+-.+.|....-.+.+++|+++|+.+..+
T Consensus 99 i~~a~~a-Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 99 LKNAYQA-GARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHHHHHH-TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred HHHHHhC-CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 7777765 4443333344444444488999999999988765
No 83
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=54.42 E-value=1.2e+02 Score=27.31 Aligned_cols=153 Identities=10% Similarity=0.141 Sum_probs=90.2
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCCHHH--HHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHh
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGTEKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 116 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~--lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL 116 (327)
+.++..+.++.+++.|++.|-.=-...-+.. .=+++++. -.+++-|..... ...+.+...+ -+++|
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a-------~g~~~~L~vDaN-~~w~~~~A~~----~~~~l 209 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNE-------FSKNIKFRFDAN-QGWNLAQTKQ----FIEEI 209 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHH-------CCTTSEEEEECT-TCCCHHHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHh-------cCCCCeEEEeCC-CCcCHHHHHH----HHHHH
Confidence 5667777788889999998864332221222 22455553 233444555542 2334443322 22333
Q ss_pred CCCc-eeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeee
Q 044053 117 QMEY-LDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 117 ~~d~-iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
. +| .++.++..|.+. +-++.+.+++++-.+. ..|=|-++...+.++++.... +++
T Consensus 210 ~-~~~~~l~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v 266 (379)
T 3r0u_A 210 N-KYSLNVEIIEQPVKY--------------------YDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQAC--NMI 266 (379)
T ss_dssp H-TSCCCEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCC--SEE
T ss_pred h-hcCCCcEEEECCCCc--------------------ccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCC--CEE
Confidence 2 12 567777766431 1145666777654443 556677889999999886543 467
Q ss_pred ecccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 195 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 195 q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
|+...-. ..-..+...|+++|+.++..+.+.+
T Consensus 267 ~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~~es 301 (379)
T 3r0u_A 267 NIKLAKTGGILEAQKIKKLADSAGISCMVGCMMES 301 (379)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred EECccccCCHHHHHHHHHHHHHcCCEEEEeCCCcc
Confidence 6665443 2226789999999999998766643
No 84
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=54.13 E-value=1.3e+02 Score=27.34 Aligned_cols=146 Identities=15% Similarity=0.144 Sum_probs=87.8
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCC--CCcC-CH-HHHH---HHHHHHHhcCCCCCCCcEEEEeccCCCCC--ChhhHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTA--AMYG-TE-KALG---EAIAEALRLGLVSSREQLFITSKLWCQNA--HRDHVIPAL 109 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA--~~Yg-sE-~~lG---~~L~~~~~~g~~~~R~~v~I~tK~~~~~~--~~~~i~~~l 109 (327)
+.++..+....+.+.|++.|..- + .| +- +..- +++++.+ | +++-|..+.. ... +.+...+-+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~sp-vG~~~~~~~~e~v~avr~a~--G-----~d~~l~vDan-~~~~~~~~~a~~~~ 215 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGP-IGRGTVAADADQIMAAREGL--G-----PDGDLMVDVG-QIFGEDVEAAAARL 215 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTT-TTSSCHHHHHHHHHHHHHHH--C-----SSSEEEEECT-TTTTTCHHHHHTTH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCC-CCCCHHHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCCCCHHHHHHHH
Confidence 56777777888899999998752 1 23 21 2111 2333321 2 3555666653 234 555555544
Q ss_pred HHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-cCCccEEEe-ccccHHHHHHHHHhC
Q 044053 110 KKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQM-LGLTKSIGL-SNFSCKKIETILTFA 187 (327)
Q Consensus 110 e~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~Gkir~iGv-S~~~~~~l~~~~~~~ 187 (327)
+. |+.+++++| ..|.. .+-|+.+.++++ .-.|-=++- +.++...++++++..
T Consensus 216 ~~-l~~~~i~~i-----EqP~~--------------------~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~ 269 (401)
T 2hzg_A 216 PT-LDAAGVLWL-----EEPFD--------------------AGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYG 269 (401)
T ss_dssp HH-HHHTTCSEE-----ECCSC--------------------TTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHS
T ss_pred HH-HHhcCCCEE-----ECCCC--------------------ccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCC
Confidence 44 777877655 34421 112577778887 555554433 445788999998876
Q ss_pred CCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEe
Q 044053 188 TIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 188 ~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~ 221 (327)
.. +++|+..+-. ..-.++..+|+++|+.++..
T Consensus 270 ~~--d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 270 RI--GFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp CC--SEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred CC--CEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 54 3666655443 22267899999999998865
No 85
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=53.97 E-value=1.3e+02 Score=27.41 Aligned_cols=148 Identities=17% Similarity=0.171 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCC--CcC-------C----HH--HHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChh
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAA--MYG-------T----EK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRD 103 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~--~Yg-------s----E~--~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~ 103 (327)
+.++..+..+.+++.|++.|-.-. .|+ + +. .+=+++++.+ -+++-|..... ...+.+
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~-------G~d~~l~vDan-~~~~~~ 222 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAV-------GTKADLLFGTH-GQFTVS 222 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHH-------GGGSEEEECCC-SCBCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHc-------CCCCeEEEeCC-CCcCHH
Confidence 567777778888999999997532 111 1 11 1223455432 24555666653 233444
Q ss_pred hHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHH
Q 044053 104 HVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIET 182 (327)
Q Consensus 104 ~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~ 182 (327)
...+ +-+.|+.+++++| ..|... +-++.+.++++.-.|. ..|=+.++...+++
T Consensus 223 ~A~~-~~~~l~~~~i~~i-----EeP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 276 (404)
T 4e5t_A 223 GAKR-LARRLEAYDPLWF-----EEPIPP--------------------EKPEDMAEVARYTSIPVATGERLCTKYEFSR 276 (404)
T ss_dssp HHHH-HHHHHGGGCCSEE-----ECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHHHH
T ss_pred HHHH-HHHHHhhcCCcEE-----ECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHH
Confidence 4333 2345666765554 444221 1245677777765555 33445567888999
Q ss_pred HHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEec
Q 044053 183 ILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 183 ~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~ 222 (327)
+++.... +++|+...-. ..-..+...|+.+|+.+..++
T Consensus 277 ~i~~~a~--d~v~~d~~~~GGit~~~~ia~~A~~~gi~~~~h~ 317 (404)
T 4e5t_A 277 VLETGAA--SILQMNLGRVGGLLEAKKIAAMAECHSAQIAPHL 317 (404)
T ss_dssp HHHHTCC--SEECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHhCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 9886644 4777766554 223678999999999986654
No 86
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=53.76 E-value=1.3e+02 Score=27.23 Aligned_cols=149 Identities=12% Similarity=0.018 Sum_probs=86.4
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH--h
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA--L 116 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r--L 116 (327)
+.++..+....+.+.|++.|..--.-++-+..-+.++.. ++- --+++-|..... ..++.+...+-++. |+. +
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~av-R~a---~G~~~~l~vDan-~~~~~~~a~~~~~~-l~~~g~ 218 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELL-KTC---VPAGSKVMIDPN-EAWTSKEALTKLVA-IREAGH 218 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHH-HTT---SCTTCEEEEECT-TCBCHHHHHHHHHH-HHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHH-HHh---hCCCCeEEEECC-CCCCHHHHHHHHHH-HHhcCC
Confidence 567777778888999999987422112211111222221 111 224555665653 33455655555544 777 5
Q ss_pred CCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC-CccEEEeccccHHHHHHHHHhCCCCCeeee
Q 044053 117 QMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLG-LTKSIGLSNFSCKKIETILTFATIPPSINQ 195 (327)
Q Consensus 117 ~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-kir~iGvS~~~~~~l~~~~~~~~~~~~~~q 195 (327)
+++ ++..|.+. +-++.+.++++.- .|-=++--+.+...++++++.... +++|
T Consensus 219 ~i~-----~iEqP~~~--------------------~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~--d~v~ 271 (389)
T 2oz8_A 219 DLL-----WVEDPILR--------------------HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAA--DILN 271 (389)
T ss_dssp CCS-----EEESCBCT--------------------TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCC--SEEE
T ss_pred Cce-----EEeCCCCC--------------------cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCC--CEEE
Confidence 543 44554221 1246677777764 555443333388889999886544 4777
Q ss_pred cccCcccccHHHHHHHHHcCCEEEEe
Q 044053 196 VEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 196 ~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
+. .=+..-.++...|+++|+.++..
T Consensus 272 ik-GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 272 VH-GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp EC-SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred EC-cCHHHHHHHHHHHHHcCCeEeec
Confidence 76 33333368999999999999887
No 87
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=53.68 E-value=10 Score=35.64 Aligned_cols=56 Identities=16% Similarity=0.160 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCC
Q 044053 68 KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPG 135 (327)
Q Consensus 68 ~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~ 135 (327)
+.||+.|+.. .+..++|.-..-+...+.+-+...++ +.+ ..+|+.+.++|.+..+|
T Consensus 125 ~~I~~~l~~~-------~~g~lVV~eSTVppGtte~~~~~~l~----~~~-~~~~f~v~~~PErl~eG 180 (444)
T 3vtf_A 125 RAVGRGIRAK-------GRWHLVVVKSTVPPGTTEGLVARAVA----EEA-GGVKFSVASNPEFLREG 180 (444)
T ss_dssp HHHHHHHHHH-------CSCCEEEECSCCCTTTTTTHHHHHHH----TTT-TTCCCEEEECCCCCCTT
T ss_pred HHHHHHHhhc-------CCCeEEEEeCCCCCchHHHHHHHHHH----HhC-CCCCceeecCcccccCC
Confidence 4466666542 34555554333333333232333332 222 36789999999887664
No 88
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=53.45 E-value=1.3e+02 Score=27.12 Aligned_cols=151 Identities=12% Similarity=0.097 Sum_probs=87.0
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC-HH--HHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT-EK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs-E~--~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+..+.+++.|++.|-.=-.-.. +. ..=+++++.+ -+++-|..... ...+.+...+ +-+.|+.
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~-------g~~~~l~vDan-~~~~~~~A~~-~~~~l~~ 216 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEF-------GERIDLRLDFN-QALTPFGAMK-ILRDVDA 216 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHH-------GGGSEEEEECT-TCCCTTTHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHh-------CCCCeEEEeCC-CCcCHHHHHH-HHHHHhh
Confidence 4555566677788889998864322111 11 1223455432 23445555542 2334444433 3456666
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
+++++|. .|.+. +-++.+.+++++-.|. ..|=+.++...+.++++.... +++
T Consensus 217 ~~i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v 269 (377)
T 3my9_A 217 FRPTFIE-----QPVPR--------------------RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAA--DAI 269 (377)
T ss_dssp TCCSCEE-----CCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCC--SEE
T ss_pred cCCCEEE-----CCCCc--------------------cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCC--CEE
Confidence 7766664 44221 1246667777764444 445566788999999887644 367
Q ss_pred ecccCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 195 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 195 q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
|+...-+ ..-.++...|+++|+.++..+.+.
T Consensus 270 ~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~e 303 (377)
T 3my9_A 270 SVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWE 303 (377)
T ss_dssp ECCHHHHTSHHHHHHHHHHHHHHTCCEECCEECC
T ss_pred EecccccCCHHHHHHHHHHHHHcCCeEecCCCCC
Confidence 6665443 222678999999999997654443
No 89
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=53.05 E-value=1.3e+02 Score=26.93 Aligned_cols=148 Identities=16% Similarity=0.178 Sum_probs=86.8
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC-CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhC
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 117 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~ 117 (327)
+.++..+....+.+.|++.|-.--.-. ..+.+ +++++.+ | + ++-|.-.. +..++.+. .+-+ +.|+.++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~e~v-~avr~~~--g---~--~~~l~vDa-n~~~~~~~-~~~~-~~l~~~~ 209 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKIEPGWDVEPV-RAVRERF--G---D--DVLLQVDA-NTAYTLGD-APQL-ARLDPFG 209 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECBTTBSHHHH-HHHHHHH--C---T--TSEEEEEC-TTCCCGGG-HHHH-HTTGGGC
T ss_pred CHHHHHHHHHHHHHhCccEEEEecCchhHHHHH-HHHHHhc--C---C--CceEEEec-cCCCCHHH-HHHH-HHHHhcC
Confidence 456677777888899999876421001 34444 3455432 2 2 33344443 23345566 4443 3377777
Q ss_pred CCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-EeccccHHHHHHHHHhCCCCCeeeec
Q 044053 118 MEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFSCKKIETILTFATIPPSINQV 196 (327)
Q Consensus 118 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~~~q~ 196 (327)
+++| ..|.+. +-++.+.+++++-.|-=. |=+.++...++++++.... +++|+
T Consensus 210 i~~i-----E~P~~~--------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~i 262 (368)
T 1sjd_A 210 LLLI-----EQPLEE--------------------EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAV--QIVNI 262 (368)
T ss_dssp CSEE-----ECCSCT--------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCC--SEEEE
T ss_pred CCeE-----eCCCCh--------------------hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCC--CEEEe
Confidence 6644 444211 125667777776555433 3345678899999876544 47777
Q ss_pred ccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 197 EMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 197 ~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
..+-. ..-.++...|+++|+.++.-+-+
T Consensus 263 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 293 (368)
T 1sjd_A 263 KPGRVGGYLEARRVHDVCAAHGIPVWCGGMI 293 (368)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred cccccCCHHHHHHHHHHHHHcCCcEEeCCcc
Confidence 65543 22367899999999997654444
No 90
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=52.72 E-value=54 Score=28.69 Aligned_cols=101 Identities=16% Similarity=0.100 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHH
Q 044053 103 DHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIET 182 (327)
Q Consensus 103 ~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~ 182 (327)
..-+..+-+.|.++|+++|..-....|... + . ..+.++.+..+.+...++..+.. -+...++.
T Consensus 29 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-~-------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~ 91 (302)
T 2ftp_A 29 VADKIRLVDDLSAAGLDYIEVGSFVSPKWV-P-------------Q--MAGSAEVFAGIRQRPGVTYAALA-PNLKGFEA 91 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECSCTTTC-G-------------G--GTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCEEEECCCcCcccc-c-------------c--ccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHH
Confidence 345566667789999999998764433210 0 0 11223344455445566666665 46778888
Q ss_pred HHHhCCCCCeeeecccCccc--------c------cHHHHHHHHHcCCEEEEe
Q 044053 183 ILTFATIPPSINQVEMHPVW--------Q------QRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 183 ~~~~~~~~~~~~q~~~~~~~--------~------~~~ll~~~~~~gi~v~a~ 221 (327)
+++. +++.+.+-...|..+ . -.+++++|+++|+.|.++
T Consensus 92 a~~a-G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~ 143 (302)
T 2ftp_A 92 ALES-GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY 143 (302)
T ss_dssp HHHT-TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHhC-CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 8874 444222222332221 1 157899999999998654
No 91
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=51.23 E-value=1.3e+02 Score=28.04 Aligned_cols=110 Identities=11% Similarity=0.053 Sum_probs=62.0
Q ss_pred CcCCHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCC-----ceeEEEeecCCCCCCCCC
Q 044053 63 MYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQME-----YLDLYLVHLPISSKPGEV 137 (327)
Q Consensus 63 ~YgsE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d-----~iDl~~lH~p~~~~~~~~ 137 (327)
.||.|+.+-++|++..+.- +.+-++|.|-.-. +-+-..++...++++.. -+.++.+|.|.....
T Consensus 73 VfGg~~~L~~~I~~~~~~~---~P~~I~V~tTC~~-----e~IGdDi~~v~~~~~~~~~~~~~~pVi~v~tpgf~gs--- 141 (458)
T 3pdi_B 73 VMGADENVVEALKTICERQ---NPSVIGLLTTGLS-----ETQGCDLHTALHEFRTQYEEYKDVPIVPVNTPDFSGC--- 141 (458)
T ss_dssp SSCSHHHHHHHHHHHHHHT---CCSEEEEEECHHH-----HTTCTTHHHHHHHTTTSCCSCSCSCEEEECCCTTSSC---
T ss_pred ccCcHHHHHHHHHHHHHhc---CCCEEEEECCcHH-----HHhcCCHHHHHHHHHHhccccCCCeEEEeeCCCcCCc---
Confidence 5777777778887765432 4566777777522 22223344445555443 478899998865321
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHH-HHH---------cCCccEE-Eecccc--HHHHHHHHHhCCCCCe
Q 044053 138 GFPVPKEDLLPMDYRGVWEAMEE-SQM---------LGLTKSI-GLSNFS--CKKIETILTFATIPPS 192 (327)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~-l~~---------~Gkir~i-GvS~~~--~~~l~~~~~~~~~~~~ 192 (327)
.....+.++++|-+ +.+ .++|.-| |..+.. .+++.++++..++.+.
T Consensus 142 ---------~~~G~~~a~~al~~~l~~~~~~~~~~~~~~VNii~G~~~~~~D~~eik~lL~~~Gi~v~ 200 (458)
T 3pdi_B 142 ---------FESGFAAAVKAIVETLVPERRDQVGKRPRQVNVLCSANLTPGDLEYIAESIESFGLRPL 200 (458)
T ss_dssp ---------HHHHHHHHHHHHHHHSSCSSSCTTCCCSSEEEEEECTTCCHHHHHHHHHHHHTTTCEEE
T ss_pred ---------hhHHHHHHHHHHHHHhhccccCcCCCCCCeEEEEeCCCCChHHHHHHHHHHHHcCCEEE
Confidence 00113334444433 221 2457778 765443 5678888887776543
No 92
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=51.18 E-value=1.5e+02 Score=27.38 Aligned_cols=148 Identities=14% Similarity=0.119 Sum_probs=85.2
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHH--HHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAAMYGTEKAL--GEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~l--G~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
.+.++..+..+.+++.|++.|-.--.-.-+.-+ =+++++.+ -+++-|..... ...+.+...+- -+.|+.
T Consensus 200 ~~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~~d~~~v~avR~a~-------G~~~~l~vDaN-~~~~~~~A~~~-~~~L~~ 270 (441)
T 4a35_A 200 YSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMI-------GPEKTLMMDAN-QRWDVPEAVEW-MSKLAK 270 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCCCHHHHHHH-HHHHGG
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCHHHHHHHHHHHHHHh-------CCCCeEEEECC-CCCCHHHHHHH-HHhhcc
Confidence 467788888899999999998643211212111 23455432 23445555542 23344333222 223343
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----cCCccEEEeccccHHHHHHHHHhCCCCC
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQM----LGLTKSIGLSNFSCKKIETILTFATIPP 191 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~----~Gkir~iGvS~~~~~~l~~~~~~~~~~~ 191 (327)
.+++++-.|...+ -++.+.++++ .+.=-..|=+.++...+.++++...+
T Consensus 271 -----~~~~~iEeP~~~~--------------------d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~-- 323 (441)
T 4a35_A 271 -----FKPLWIEEPTSPD--------------------DILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKAL-- 323 (441)
T ss_dssp -----GCCSEEECCSCTT--------------------CHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCC--
T ss_pred -----cCccEEeCCCCcc--------------------cHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCC--
Confidence 3556666664311 1244455554 34334567777889999999886544
Q ss_pred eeeecccCcc---cccHHHHHHHHHcCCEEEEe
Q 044053 192 SINQVEMHPV---WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 192 ~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~ 221 (327)
+++|+...-+ ..-..+...|+++|+.+..+
T Consensus 324 div~~d~~~~GGit~~~kia~lA~~~gv~v~~H 356 (441)
T 4a35_A 324 QFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPH 356 (441)
T ss_dssp SEECCCTTTSSHHHHHHHHHHHHHHTTCCBCCC
T ss_pred CEEEECccccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 4777766554 22267899999999998543
No 93
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=50.57 E-value=37 Score=28.54 Aligned_cols=68 Identities=12% Similarity=0.018 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHHc-CCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEE
Q 044053 150 DYRGVWEAMEESQML-GLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 150 ~~~~~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a 220 (327)
+..+++++|..+++. +||--+|..|... .+..+.+..+.+ +.+..|+....-...+..+++.|+.++.
T Consensus 91 s~~Dil~aL~~a~~~~~kIavVg~~~~~~-~~~~i~~ll~~~--i~~~~~~~~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 91 SGYDVLQFLAKAGKLTSSIGVVTYQETIP-ALVAFQKTFNLR--LDQRSYITEEDARGQINELKANGTEAVV 159 (225)
T ss_dssp CHHHHHHHHHHTTCTTSCEEEEEESSCCH-HHHHHHHHHTCC--EEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHhhCCcEEEEeCchhhh-HHHHHHHHhCCc--eEEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 477899999999887 5677888887753 233344443443 5555655544447789999999999976
No 94
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=50.11 E-value=1.3e+02 Score=26.43 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHhCCCceeEEEee-cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCccEEEe-cc----ccH
Q 044053 105 VIPALKKSLSALQMEYLDLYLVH-LPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQML-GLTKSIGL-SN----FSC 177 (327)
Q Consensus 105 i~~~le~SL~rL~~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-Gkir~iGv-S~----~~~ 177 (327)
+.+...+.. ..|-|.||+=.-- .|+.. ..+.++.++.++.+++. +.. |.| -+ +++
T Consensus 76 ~~~~A~~~v-~~GAdiIDIg~~StrP~~~---------------~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~ 137 (310)
T 2h9a_B 76 PVAWAKKCV-EYGADIVALRLVSAHPDGQ---------------NRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDA 137 (310)
T ss_dssp HHHHHHHHH-HTTCSEEEEECGGGCTTTT---------------CCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHH
T ss_pred HHHHHHHHH-HcCCcEEEEeCccCCCCCC---------------CCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCH
Confidence 333333444 7788889876531 12111 24477777788888776 433 455 55 778
Q ss_pred HHHHHHHHhCC-CCCeeeecccCcccccHHHHHHHHHcCCEEEEecC
Q 044053 178 KKIETILTFAT-IPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 178 ~~l~~~~~~~~-~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~p 223 (327)
+.++++++.+. .++.+|-+.-. +.+++++.|+++|..++.+.+
T Consensus 138 ~V~eaal~aga~~k~iINdvs~~---~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 138 EIFPVIGEALSGRNCLLSSATKD---NYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp HHHHHHHHHTTTSCCEEEEECTT---THHHHHHHHHHHTCEEEEECS
T ss_pred HHHHHHHHhCCCCCCEEEECCCC---ccHHHHHHHHHhCCCEEEECh
Confidence 99999999875 35667755432 347899999999999999875
No 95
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=50.02 E-value=1.2e+02 Score=25.84 Aligned_cols=184 Identities=16% Similarity=0.094 Sum_probs=98.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC------CHHHHHHH---HHHHHhcCCCCCCCcEEEEeccCCC-CCChhhHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG------TEKALGEA---IAEALRLGLVSSREQLFITSKLWCQ-NAHRDHVIPA 108 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg------sE~~lG~~---L~~~~~~g~~~~R~~v~I~tK~~~~-~~~~~~i~~~ 108 (327)
+.+++.++++.|.+.|++.|=.++++- +...+-+. |++..+. ...++.| ..+.. +..+ .....
T Consensus 18 ~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~----~~~~i~I--~~G~Ev~~~~-~~~~~ 90 (262)
T 3qy7_A 18 DSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIK----EDIPLHV--LPGQEIRIYG-EVEQD 90 (262)
T ss_dssp SHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHH----TTCCCEE--ECCCEEECCT-THHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHh----cCCCCEE--ecCeEEecch-hHHHH
Confidence 457788899999999999999888873 22233332 2322111 1122222 22211 2222 23333
Q ss_pred HHH-HHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecc------ccHHHHH
Q 044053 109 LKK-SLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSN------FSCKKIE 181 (327)
Q Consensus 109 le~-SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~------~~~~~l~ 181 (327)
+++ ++-.|+ --|.+++-.|.... ...+.+.+..+.+.|.+--||=-. ...+.+.
T Consensus 91 l~~~~~~~l~--~~~~vl~e~~~~~~-----------------~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~ 151 (262)
T 3qy7_A 91 LAKRQLLSLN--DTKYILIEFPFDHV-----------------PRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLY 151 (262)
T ss_dssp HHTTCSCCGG--GSSEEEEECCTTCC-----------------CTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHH
T ss_pred HhcCCCcEEC--CceEEEEeCCCccC-----------------HHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHH
Confidence 333 233332 12445666553211 234667888889999988777432 1234455
Q ss_pred HHHHhCCCCCeeeecccCcccc-----cHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcCCCHHHH
Q 044053 182 TILTFATIPPSINQVEMHPVWQ-----QRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHGKTVAQV 256 (327)
Q Consensus 182 ~~~~~~~~~~~~~q~~~~~~~~-----~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~ 256 (327)
++.+.. ...|++.+.+.. .......|.++|+.++.-|=..+... . ...-.+.+..+.+++|...++.
T Consensus 152 ~l~~~G----~~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSDaH~~~~--r--~~~~~~a~~~l~~~~G~~~a~~ 223 (262)
T 3qy7_A 152 HLVEKG----AASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHNVKT--R--NFHTQEALYVLEKEFGSELPYM 223 (262)
T ss_dssp HHHHTT----CEEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECCBCSSSS--S--CCCHHHHHHHHHHHHCSHHHHH
T ss_pred HHHHCC----CEEEEECCccCcccchHHHHHHHHHHhCCCeEEEEccCCCCCC--C--CchHHHHHHHHHHHhCHHHHHH
Confidence 555543 256777665532 24567788889998877655543110 0 0111344555555688766664
No 96
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=48.61 E-value=1.1e+02 Score=27.70 Aligned_cols=148 Identities=14% Similarity=0.098 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHcCCCEEeCCCCcCCHH--HHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhC
Q 044053 40 TDALKLAVLEAIKLGYRHFDTAAMYGTEK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 117 (327)
Q Consensus 40 ~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~--~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~ 117 (327)
.++..+..+.+.+.|++.|..=-..+.+. ..=+++++.+ | +++-|..... ...+.+...+ +-+.|+.++
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~~~~~d~~~v~avR~a~--g-----~~~~l~vDaN-~~~~~~~A~~-~~~~L~~~~ 226 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGFDDARDVRNALHVRELL--G-----AATPLMADAN-QGWDLPRARQ-MAQRLGPAQ 226 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSSCHHHHHHHHHHHHHHH--C-----SSSCEEEECT-TCCCHHHHHH-HHHHHGGGC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCHHHHHHHHHHHHHhc--C-----CCceEEEeCC-CCCCHHHHHH-HHHHHHHhC
Confidence 35566777888899999887532222111 1223555432 2 2333444432 2344444333 334566666
Q ss_pred CCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeeec
Q 044053 118 MEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQV 196 (327)
Q Consensus 118 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q~ 196 (327)
+++|. .|.+. .+.++.+.++++.-.|. ..|=+.++...++++++... .+++|+
T Consensus 227 i~~iE-----eP~~~-------------------~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a--~d~v~~ 280 (392)
T 3ddm_A 227 LDWLE-----EPLRA-------------------DRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARS--LRVMQP 280 (392)
T ss_dssp CSEEE-----CCSCT-------------------TSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTC--EEEECC
T ss_pred CCEEE-----CCCCc-------------------cchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCC--CCEEEe
Confidence 65554 44221 01146677777765554 44556678999999887654 457776
Q ss_pred ccCcc---cccHHHHHHHHHcCCEEEEec
Q 044053 197 EMHPV---WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 197 ~~~~~---~~~~~ll~~~~~~gi~v~a~~ 222 (327)
...-+ ..-..+...|+++|+.++...
T Consensus 281 k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 281 DLAKWGGFSGCLPVARAVVAAGLRYCPHY 309 (392)
T ss_dssp CTTTTTHHHHHHHHHHHHHHTTCEECCEE
T ss_pred CcchhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 65543 223679999999999986543
No 97
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=48.33 E-value=14 Score=23.94 Aligned_cols=20 Identities=20% Similarity=0.248 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHHHHHcCCcc
Q 044053 149 MDYRGVWEAMEESQMLGLTK 168 (327)
Q Consensus 149 ~~~~~~~~~l~~l~~~Gkir 168 (327)
.+.++++.+|.+|.++|.|+
T Consensus 37 V~kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 37 VEKQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp CCHHHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHHHHHHCCCee
Confidence 34789999999999999987
No 98
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=47.96 E-value=1.7e+02 Score=26.90 Aligned_cols=146 Identities=14% Similarity=0.177 Sum_probs=87.8
Q ss_pred Ch-HHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DT-DALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~-~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+. ++..+....+.+.|++.|..--.-. ..+.| +++++.+ | +++-|..... ...+.+...+-++. |+
T Consensus 184 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~av--G-----~d~~l~vDan-~~~~~~eai~~~~~-L~ 253 (428)
T 3bjs_A 184 QPKESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVL--G-----DEVDILTDAN-TAYTMADARRVLPV-LA 253 (428)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHH--C-----TTSEEEEECT-TCCCHHHHHHHHHH-HH
T ss_pred ChHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhc--C-----CCCEEEEECC-CCCCHHHHHHHHHH-HH
Confidence 45 6677777888899999886421111 12233 3455431 2 3455555542 34456666655544 88
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC-ccEE-EeccccHHHHHHHHHhCCCCCe
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGL-TKSI-GLSNFSCKKIETILTFATIPPS 192 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk-ir~i-GvS~~~~~~l~~~~~~~~~~~~ 192 (327)
.+++++|. .|.+. +-++.+.+++++-. |-=+ |=+.++...++++++... .+
T Consensus 254 ~~~i~~iE-----qP~~~--------------------~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~--~d 306 (428)
T 3bjs_A 254 EIQAGWLE-----EPFAC--------------------NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGA--VQ 306 (428)
T ss_dssp HTTCSCEE-----CCSCT--------------------TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCC--EE
T ss_pred hcCCCEEE-----CCCCc--------------------cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCC--CC
Confidence 88877654 44210 12566777776644 5433 334567888998887543 45
Q ss_pred eeecccCcc---cccHHHHHHHHHcCCEEEEe
Q 044053 193 INQVEMHPV---WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 193 ~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~ 221 (327)
++|+..+-. ..-.++...|+++|+.++..
T Consensus 307 ~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 307 VWQPDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp EECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 777765543 22367899999999998776
No 99
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=46.33 E-value=1.6e+02 Score=26.30 Aligned_cols=145 Identities=16% Similarity=0.171 Sum_probs=77.6
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC-----CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG-----TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSL 113 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-----sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL 113 (327)
...+..+.+..+++.+.. .|+ -.+.+.+++.+.. |.....+++++++- ...+++..+
T Consensus 75 ~~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~l~~~l~~~~--g~~~~~~~v~~~~g----------~~ea~~~a~ 136 (421)
T 3l8a_A 75 PVPEIKEAIINYGREHIF------GYNYFNDDLYQAVIDWERKEH--DYAVVKEDILFIDG----------VVPAISIAL 136 (421)
T ss_dssp CCHHHHHHHHHHHHHCCS------SCBCCCHHHHHHHHHHHHHHH--CCCCCGGGEEEESC----------HHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCc------CCCCCCHHHHHHHHHHHHHHh--CCCCCHHHEEEcCC----------HHHHHHHHH
Confidence 346677778888876643 333 1334455554432 31114566766543 233444444
Q ss_pred HHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC-CccEEEec------cccHHHHHHHHHh
Q 044053 114 SALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLG-LTKSIGLS------NFSCKKIETILTF 186 (327)
Q Consensus 114 ~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-kir~iGvS------~~~~~~l~~~~~~ 186 (327)
+.+ +..=|-+++..|.. ......+ ...| ++..+-+. ..+.+.+++++..
T Consensus 137 ~~~-~~~gd~Vi~~~~~y--------------------~~~~~~~---~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~ 192 (421)
T 3l8a_A 137 QAF-SEKGDAVLINSPVY--------------------YPFARTI---RLNDHRLVENSLQIINGRFEIDFEQLEKDIID 192 (421)
T ss_dssp HHH-SCTEEEEEEEESCC--------------------HHHHHHH---HHTTEEEEEEECEEETTEEECCHHHHHHHHHH
T ss_pred HHh-cCCCCEEEECCCCc--------------------HHHHHHH---HHCCCEEEeccccccCCCeeeCHHHHHHHhhc
Confidence 444 23446677776632 2222222 2334 45555543 1478888888864
Q ss_pred CCCCCeeeecccCccc---c-c--HHHHHHHHHcCCEEEEecCCC
Q 044053 187 ATIPPSINQVEMHPVW---Q-Q--RKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 187 ~~~~~~~~q~~~~~~~---~-~--~~ll~~~~~~gi~v~a~~pl~ 225 (327)
.+...+++..+.|+.- . + +++.+.|+++|+-++.=...+
T Consensus 193 ~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~ 237 (421)
T 3l8a_A 193 NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQ 237 (421)
T ss_dssp TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 4433344433444331 1 1 678899999999998865543
No 100
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=46.23 E-value=1.3e+02 Score=26.99 Aligned_cols=151 Identities=15% Similarity=0.151 Sum_probs=87.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHh-C
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL-Q 117 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL-~ 117 (327)
+.++..+....+.+.|++.|..--. ++-+..-+.++.. ++. -.+++-|..+.. ...+.+... +-+++| .
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~av-r~a---~g~~~~l~vDan-~~~~~~~a~----~~~~~l~~ 215 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAA-LAN---QQPDEFFIVDAN-GKLSVETAL----RLLRLLPH 215 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHH-TTT---CCTTCEEEEECT-TBCCHHHHH----HHHHHSCT
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHH-HHh---cCCCCEEEEECC-CCcCHHHHH----HHHHHHHh
Confidence 5667777778888999999874211 1222122333322 111 224566666653 233333322 234444 2
Q ss_pred CCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-ccccHHHHHHHHHhCCCCCeeeec
Q 044053 118 MEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSCKKIETILTFATIPPSINQV 196 (327)
Q Consensus 118 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGv-S~~~~~~l~~~~~~~~~~~~~~q~ 196 (327)
..++ ++..|.. -++.+.+++++-.|-=++- +.++...++++++....+ ++|+
T Consensus 216 --~~~i-~iE~P~~----------------------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~v~i 268 (371)
T 2ps2_A 216 --GLDF-ALEAPCA----------------------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAE--GIDL 268 (371)
T ss_dssp --TCCC-EEECCBS----------------------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCS--EEEE
T ss_pred --hcCC-cCcCCcC----------------------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC--EEEe
Confidence 2244 5555421 3577778887766654443 446788999998876543 6666
Q ss_pred ccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 197 EMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 197 ~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
..+-. ..-.++...|+++|+.++..+.+.+
T Consensus 269 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (371)
T 2ps2_A 269 KISKAGGLTRGRRQRDICLAAGYSVSVQETCGS 301 (371)
T ss_dssp EHHHHTSHHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred chhhcCCHHHHHHHHHHHHHcCCeEEecCCCcC
Confidence 54432 2226788999999999998777643
No 101
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=46.06 E-value=1.6e+02 Score=26.02 Aligned_cols=151 Identities=7% Similarity=0.073 Sum_probs=88.0
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+....+.+.|++.|-.--.-. ..+.+ +++++. | +.-.+.| .. +...+.+...+-++ .|+.
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~---g---~~~~l~v--Da-n~~~~~~~a~~~~~-~l~~ 207 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV---T---RGAKYIV--DA-NMGYTQKEAVEFAR-AVYQ 207 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH---S---TTCEEEE--EC-TTCSCHHHHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh---C---CCCeEEE--EC-CCCCCHHHHHHHHH-HHHh
Confidence 456677777888899999986421111 12223 455543 3 3333433 33 23345566555443 3777
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-EeccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
++++ +.++..|.+. +-++.+.+++++-.|-=. |=+.++...++++++....+ ++
T Consensus 208 ~~i~---~~~iE~P~~~--------------------~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d--~v 262 (345)
T 2zad_A 208 KGID---IAVYEQPVRR--------------------EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVD--YV 262 (345)
T ss_dssp TTCC---CSEEECCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCS--EE
T ss_pred cCCC---eeeeeCCCCc--------------------ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCC--EE
Confidence 7766 1134454221 124666777766555533 33556789999998876543 66
Q ss_pred ecccCc--ccccHHHHHHHHHcCCEEEEecCCC
Q 044053 195 QVEMHP--VWQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 195 q~~~~~--~~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
|+..+- +..-.++...|+++|+.++..+.+.
T Consensus 263 ~ik~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 295 (345)
T 2zad_A 263 NIKLMKSGISDALAIVEIAESSGLKLMIGCMGE 295 (345)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTTCEEEECCSSC
T ss_pred EEecccccHHHHHHHHHHHHHcCCeEEEecCcc
Confidence 664332 2222678999999999998876653
No 102
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=45.29 E-value=1.7e+02 Score=26.35 Aligned_cols=153 Identities=10% Similarity=0.100 Sum_probs=90.7
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCCC----cC-CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHH
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAAM----YG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKS 112 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~~----Yg-sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~S 112 (327)
.+.++..+.++.+.+.|++.|-.=-. .+ .+..+. .++.. ++. --+++-|...... ..+.+.. .+-
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~-~v~av-R~a---~G~~~~L~vDaN~-~~~~~~A----~~~ 213 (386)
T 3fv9_G 144 DTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAE-RITAC-LAD---RQPGEWYLADANN-GLTVEHA----LRM 213 (386)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHH-HHHHH-TTT---CCTTCEEEEECTT-CCCHHHH----HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHH-HHHHH-HHH---cCCCCeEEEECCC-CCCHHHH----HHH
Confidence 35677778888889999999864221 12 122221 22221 111 2245666666532 2333332 234
Q ss_pred HHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCC
Q 044053 113 LSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPP 191 (327)
Q Consensus 113 L~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~ 191 (327)
+++|. +.+++ ++-.|.+ -++.+.+++++-.|. ..|=|.++...+.++++....
T Consensus 214 ~~~l~-~~~~i-~iEeP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~-- 267 (386)
T 3fv9_G 214 LSLLP-PGLDI-VLEAPCA----------------------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLC-- 267 (386)
T ss_dssp HHHSC-SSCCC-EEECCCS----------------------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCC--
T ss_pred HHHhh-ccCCc-EEecCCC----------------------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCC--
Confidence 55663 34566 6766522 246677777765554 455667888999999886544
Q ss_pred eeeecccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 192 SINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 192 ~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+++|+....+ ..-.++...|+++|+.++..+.+.+
T Consensus 268 d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 268 DGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp SEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CEEEECccccCCHHHHHHHHHHHHHcCCEEEeCCCCCC
Confidence 4777665443 2236789999999999997766653
No 103
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=45.11 E-value=1.7e+02 Score=26.27 Aligned_cols=148 Identities=16% Similarity=0.183 Sum_probs=85.5
Q ss_pred ChHHHHHHHHHHHHcCCCEEeC--CCCcCCHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHh
Q 044053 39 DTDALKLAVLEAIKLGYRHFDT--AAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 116 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DT--A~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL 116 (327)
+.++..+.+..+++.|++.|=. .+.. ..+.+ +++++. - .++.|..-.. ..++.+.+ + + +++|
T Consensus 161 ~~~~~~~~a~~~~~~G~~~~KiKvg~~~-d~~~v-~avr~a-------~-~~~~l~vDaN-~~~~~~~a-~-~---~~~l 224 (386)
T 1wue_A 161 DLPQLLKQVQLAVEKGYQRVKLKIRPGY-DVEPV-ALIRQH-------F-PNLPLMVDAN-SAYTLADL-P-Q---LQRL 224 (386)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECBTTB-SHHHH-HHHHHH-------C-TTSCEEEECT-TCCCGGGH-H-H---HHGG
T ss_pred CHHHHHHHHHHHHHhhhheEEEeeCcHH-HHHHH-HHHHHh-------C-CCCeEEEeCC-CCCCHHHH-H-H---HHHH
Confidence 4566667778888999998642 2111 23334 455654 2 2344444432 23445554 2 2 3444
Q ss_pred CCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeee
Q 044053 117 QMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQ 195 (327)
Q Consensus 117 ~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q 195 (327)
. ..++.++-.|...+ -++.+.++.++-.|. ..|=|.++...+.++++.... .++|
T Consensus 225 ~--~~~i~~iEqP~~~~--------------------d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~--d~i~ 280 (386)
T 1wue_A 225 D--HYQLAMIEQPFAAD--------------------DFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSC--RSIN 280 (386)
T ss_dssp G--GSCCSCEECCSCTT--------------------CSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCC--SEEE
T ss_pred H--hCCCeEEeCCCCcc--------------------cHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCC--CEEE
Confidence 2 23555666664321 135666776654443 445566788899998876543 4676
Q ss_pred cccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 196 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 196 ~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+..+-. ..-.++...|+++|+.++..+.+.+
T Consensus 281 ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 314 (386)
T 1wue_A 281 LKIPRVGGIHEALKIAAFCQENDLLVWLGGMFES 314 (386)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred EchhhhCCHHHHHHHHHHHHHCCCeEEECCCccc
Confidence 665442 2226789999999999987666543
No 104
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=44.72 E-value=78 Score=23.57 Aligned_cols=64 Identities=9% Similarity=0.080 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 152 RGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 152 ~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
..++..|....+.|++. . ...+..++++......+++--..++..-...+..+|+++||+++-+
T Consensus 6 ~ki~~~L~~a~k~gkl~-~-----G~~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 6 KKVLKTVKKASKAKNVK-R-----GVKEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHHHHHHHTTTCEE-E-----SHHHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHHHHHcCCcc-c-----cHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEE
Confidence 45667777788888865 2 3567777888777777777666666543466888999999998754
No 105
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=44.54 E-value=1.7e+02 Score=26.00 Aligned_cols=150 Identities=17% Similarity=0.210 Sum_probs=89.1
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC--HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHh
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT--EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 116 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs--E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL 116 (327)
+.++..+..+.+++.|++.|..--.-.. +..+=+++++.+ .+++-|..... ...+.+... +-+++|
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~~~d~~~v~avR~a~-------g~~~~l~vDan-~~~~~~~a~----~~~~~L 206 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREAV-------GFDIKLRLDAN-QAWTPKDAV----KAIQAL 206 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCSCHHHHH----HHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHHHHHc-------CCCCeEEEECC-CCCCHHHHH----HHHHHH
Confidence 5677777788888999999875322111 112224555431 23455555543 233433332 233444
Q ss_pred CCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeee
Q 044053 117 QMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQ 195 (327)
Q Consensus 117 ~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q 195 (327)
. -.++.++..|.+. +-++.+.+++++-.|. ..|=+-++...+.++++.... +++|
T Consensus 207 ~--~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~ 262 (354)
T 3jva_A 207 A--DYQIELVEQPVKR--------------------RDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTV--DVIN 262 (354)
T ss_dssp T--TSCEEEEECCSCT--------------------TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCC--SEEE
T ss_pred H--hcCCCEEECCCCh--------------------hhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCC--CEEE
Confidence 3 3566677766431 1246677777765554 334466788999999886644 3666
Q ss_pred cccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 196 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 196 ~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
+..+-. ..-.++...|+++|+.++..+.+
T Consensus 263 ~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 263 IKLMKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred ECchhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 664433 22267899999999999987777
No 106
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=44.49 E-value=1.8e+02 Score=26.74 Aligned_cols=151 Identities=17% Similarity=0.214 Sum_probs=87.8
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCC-CcC-------------------CH----HH--HHHHHHHHHhcCCCCCCCcEEE
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAA-MYG-------------------TE----KA--LGEAIAEALRLGLVSSREQLFI 91 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~-~Yg-------------------sE----~~--lG~~L~~~~~~g~~~~R~~v~I 91 (327)
.+.++..+.++.+++.|++.|-.=- .++ .+ .. +=+++++. --+++-|
T Consensus 153 ~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~a-------vG~d~~L 225 (422)
T 3tji_A 153 ETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREK-------YGWKLHI 225 (422)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH-------HCSSSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHH-------cCCCCEE
Confidence 3567788888899999999886310 011 01 11 12345543 1234555
Q ss_pred EeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EE
Q 044053 92 TSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SI 170 (327)
Q Consensus 92 ~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~i 170 (327)
..... ...+.+...+- -+.|+.+++++| ..|.+. +-++.+.++++.-.|- ..
T Consensus 226 ~vDaN-~~~~~~~A~~~-~~~Le~~~i~~i-----EqP~~~--------------------~d~~~~~~l~~~~~iPIa~ 278 (422)
T 3tji_A 226 LHDVH-ERLFPQQAVQL-AKQLEPFQPYFI-----EDILPP--------------------QQSAWLEQVRQQSCVPLAL 278 (422)
T ss_dssp EEECT-TCSCHHHHHHH-HHHHGGGCCSEE-----ECCSCG--------------------GGGGGHHHHHHHCCCCEEE
T ss_pred EEECC-CCCCHHHHHHH-HHHHHhhCCCeE-----ECCCCh--------------------hhHHHHHHHHhhCCCCEEE
Confidence 55653 23444443332 235666665544 444221 1235567777765554 44
Q ss_pred EeccccHHHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 171 GLSNFSCKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 171 GvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
|=+-++...++++++.... +++|+...-. ..-..+...|+.+|+.++..++.
T Consensus 279 dE~~~~~~~~~~ll~~ga~--d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~ 333 (422)
T 3tji_A 279 GELFNNPAEWHDLIVNRRI--DFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPG 333 (422)
T ss_dssp CTTCCSGGGTHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred eCCcCCHHHHHHHHhcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 4566778888888886544 4777766543 22367999999999999877663
No 107
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=44.08 E-value=1.8e+02 Score=26.13 Aligned_cols=145 Identities=11% Similarity=0.053 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHcCCCEEeCCCCcCC----HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHh
Q 044053 41 DALKLAVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 116 (327)
Q Consensus 41 ~~~~~~l~~A~~~Gi~~~DTA~~Ygs----E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL 116 (327)
++..+....+.+.|++.|..--.-++ .+.+ +++++.+ | +++-|..... ..++.+...+-++. |+.+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v-~avR~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~~-l~~~ 210 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHI-NALQHTA--G-----SSITMILDAN-QSYDAAAAFKWERY-FSEW 210 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHH-HHHHHHH--C-----TTSEEEEECT-TCCCHHHHHTTHHH-HTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhh--C-----CCCEEEEECC-CCCCHHHHHHHHHH-Hhhc
Confidence 66677778888999998874221122 2223 3444431 2 3455555543 23444444333332 4443
Q ss_pred CCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-EeccccHHHHHHHHHhCCCCCeeee
Q 044053 117 QMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFSCKKIETILTFATIPPSINQ 195 (327)
Q Consensus 117 ~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i-GvS~~~~~~l~~~~~~~~~~~~~~q 195 (327)
-++.++..|.+. +-++.+.+++++-.|-=. |=+.++...++++++.... +++|
T Consensus 211 ----~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~ 264 (382)
T 2gdq_A 211 ----TNIGWLEEPLPF--------------------DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCL--DIIQ 264 (382)
T ss_dssp ----SCEEEEECCSCS--------------------SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCC--SEEC
T ss_pred ----cCCeEEECCCCc--------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC--CEEe
Confidence 044456655321 125667777776555533 3345678899999886543 4777
Q ss_pred cccCcc---cccHHHHHHHHHcCCEEEEe
Q 044053 196 VEMHPV---WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 196 ~~~~~~---~~~~~ll~~~~~~gi~v~a~ 221 (327)
+..+-. ..-.++...|+++|+.++..
T Consensus 265 ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 265 PDVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp CCTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred cCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 766543 22367899999999998876
No 108
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=43.94 E-value=58 Score=23.81 Aligned_cols=63 Identities=13% Similarity=0.053 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 152 RGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 152 ~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
..+...|....+.|++. ....+..++++......+++--.. +......+..+|++++|+++.|
T Consensus 7 ~~i~~~L~la~kagkl~------~G~~~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 7 MDVNKAIRTAVDTGKVI------LGSKRTIKFVKHGEGKLVVLAGNI-PKDLEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp CHHHHHHHHHHHHSEEE------ESHHHHHHHHHTTCCSEEEECTTC-BHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHcCCee------eCHHHHHHHHHcCCceEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEE
Confidence 35677888888888865 245677788887766655554444 3333367888999999998765
No 109
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=43.89 E-value=86 Score=22.43 Aligned_cols=62 Identities=5% Similarity=-0.058 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 153 GVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 153 ~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
.++..|.-.++.|++. ....+..++++......+++--..++. ....+..+|+.++|+++-+
T Consensus 6 ki~~~L~la~kagk~v------~G~~~v~kai~~gka~lViiA~D~~~~-~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 6 EWFPLLGLANRARKVV------SGEDLVIKEIRNARAKLVLLTEDASSN-TAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp THHHHHHHHHHTTCEE------ESHHHHHHHHHTTCCSEEEEETTSCHH-HHHHHHHHHHHTTCCEEEE
T ss_pred hhHHHhhhhhhhhhcc------cchhhhHHHHhcCceeEEEEecccccc-chhhhcccccccCCCeeee
Confidence 4678888899999965 345677888888777776766666654 3367888899999999876
No 110
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=43.54 E-value=23 Score=31.68 Aligned_cols=107 Identities=14% Similarity=0.223 Sum_probs=69.6
Q ss_pred CCccEEEeccccHHHHHHHHHhCC--CC----CeeeecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccC
Q 044053 165 GLTKSIGLSNFSCKKIETILTFAT--IP----PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLE 238 (327)
Q Consensus 165 Gkir~iGvS~~~~~~l~~~~~~~~--~~----~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~ 238 (327)
.|+-.+-=.+++.+...++.+... ++ |..+.+=|--..|+..+.+++++.++-++.-++-. ..
T Consensus 171 ~kv~~vsQTT~s~~~~~~iv~~L~~r~p~i~~~~~ntIC~AT~~RQ~av~~lA~~vD~miVVGg~nS-----------SN 239 (328)
T 3szu_A 171 EKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNS-----------SN 239 (328)
T ss_dssp TSEEEEECTTSCHHHHHHHHHHHHHHCTTCBCCSSCSCCHHHHHHHHHHHHHHHHCSEEEEECCTTC-----------HH
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHHhCcccccCCCCCcCHHHHHHHHHHHHHHHhCCEEEEeCCCCC-----------ch
Confidence 466666666777777666554322 21 11122222222345778999999998888743332 23
Q ss_pred hHHHHHHHHHcCC------CHHHHHHHHHHhcC-CEEeecCCCHHHHHHhh
Q 044053 239 NEALKEIAKAHGK------TVAQVSLRWIVEQG-ATVVVKSLNLERMKQNL 282 (327)
Q Consensus 239 ~~~l~~ia~~~~~------s~aq~al~w~l~~~-~~vi~g~~~~~~l~enl 282 (327)
..+|.++|++.|. +..++-..|.-... +.+..|+|+|+.|-+.+
T Consensus 240 T~rL~eia~~~g~~ty~Ie~~~el~~~wl~g~~~VGITAGASTP~~lieeV 290 (328)
T 3szu_A 240 SNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNV 290 (328)
T ss_dssp HHHHHHHHHHTTCEEEEESSGGGCCHHHHTTCSEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEeCChHHCCHHHhCCCCEEEEeecCCCCHHHHHHH
Confidence 5789999999884 67788889986555 67889999987765443
No 111
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=42.77 E-value=1.3e+02 Score=27.99 Aligned_cols=82 Identities=9% Similarity=0.026 Sum_probs=55.9
Q ss_pred ceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhC-CCCCeeeeccc
Q 044053 120 YLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFA-TIPPSINQVEM 198 (327)
Q Consensus 120 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~-~~~~~~~q~~~ 198 (327)
.+|++.||.-.. +.+......+.+++. -=--+-+.+++++.++++++.+ +..+.++-...
T Consensus 127 ~~D~ial~~~s~------------------dpe~~~~vVk~V~e~-~dvPL~IDS~dpevleaALea~a~~~plI~sat~ 187 (446)
T 4djd_C 127 TIQAIAIRHDAD------------------DPAAFKAAVASVAAA-TQLNLVLMADDPDVLKEALAGVADRKPLLYAATG 187 (446)
T ss_dssp CCCEEEEECCSS------------------STHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHGGGGGGCCEEEEECT
T ss_pred cCcEEEEEeCCC------------------CHHHHHHHHHHHHHh-CCCCEEEecCCHHHHHHHHHhhcCcCCeeEecch
Confidence 588998887532 134455555555443 2225778889999999999977 45566654432
Q ss_pred CcccccHHHHHHHHHcCCEEEEecC
Q 044053 199 HPVWQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 199 ~~~~~~~~ll~~~~~~gi~v~a~~p 223 (327)
. +-+++.+.++++|..++++++
T Consensus 188 d---n~e~m~~lAa~y~~pVi~~~~ 209 (446)
T 4djd_C 188 A---NYEAMTALAKENNCPLAVYGN 209 (446)
T ss_dssp T---THHHHHHHHHHTTCCEEEECS
T ss_pred h---hHHHHHHHHHHcCCcEEEEec
Confidence 1 115799999999999999876
No 112
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=42.07 E-value=2e+02 Score=26.01 Aligned_cols=148 Identities=20% Similarity=0.213 Sum_probs=87.1
Q ss_pred ChHHHHHHHHHHHHcCCCEEeC--CCCcCCHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHh
Q 044053 39 DTDALKLAVLEAIKLGYRHFDT--AAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 116 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DT--A~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL 116 (327)
+.++..+.+..+.+.|++.|-. .+.. ..+.+ +++++. - .++.|..-.. ..++.+.+ +.+ +.|+.+
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~-d~~~v-~avr~a-------~-~~~~l~vDaN-~~~~~~~a-~~~-~~l~~~ 227 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKIAPNK-DIQFV-EAVRKS-------F-PKLSLMADAN-SAYNREDF-LLL-KELDQY 227 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECBTTB-SHHHH-HHHHTT-------C-TTSEEEEECT-TCCCGGGH-HHH-HTTGGG
T ss_pred CHHHHHHHHHHHHHHhhHhheeccChHH-HHHHH-HHHHHH-------c-CCCEEEEECC-CCCCHHHH-HHH-HHHHhC
Confidence 4566777778888999998742 2111 23333 455532 2 3455555542 23455554 322 334443
Q ss_pred CCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeee
Q 044053 117 QMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQ 195 (327)
Q Consensus 117 ~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q 195 (327)
++.++..|...+ -++.+.+++++-.|. ..|=|.++...+.++++.... .++|
T Consensus 228 -----~i~~iEqP~~~~--------------------d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~--d~v~ 280 (393)
T 1wuf_A 228 -----DLEMIEQPFGTK--------------------DFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSC--RAIN 280 (393)
T ss_dssp -----TCSEEECCSCSS--------------------CSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCC--SEEE
T ss_pred -----CCeEEECCCCCc--------------------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCC--CEEE
Confidence 555666664321 135666777665443 445566788899998876543 4777
Q ss_pred cccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 196 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 196 ~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+..+-. ..-.++...|+++|+.++..+.+.+
T Consensus 281 ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 314 (393)
T 1wuf_A 281 LKLARVGGMSSALKIAEYCALNEILVWCGGMLEA 314 (393)
T ss_dssp ECTGGGTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred eChhhhCCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 766543 2226789999999999987666543
No 113
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=42.01 E-value=1.7e+02 Score=25.20 Aligned_cols=141 Identities=9% Similarity=-0.043 Sum_probs=77.1
Q ss_pred eeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHH-HcCCCEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCCcE
Q 044053 14 KLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAI-KLGYRHFDTAAMYGT---EKALGEAIAEALRLGLVSSREQL 89 (327)
Q Consensus 14 ~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~-~~Gi~~~DTA~~Ygs---E~~lG~~L~~~~~~g~~~~R~~v 89 (327)
...+|.. --=|+|-+||..+. + .+++..|+ ..|-..+=.|--=-+ ..--...+. . + ++.++
T Consensus 10 ~l~i~~~---~f~SRl~~Gtgky~-~----~~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~-~----i--~~~~~ 74 (265)
T 1wv2_A 10 PFVIAGR---TYGSRLLVGTGKYK-D----LDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLD-V----I--PPDRY 74 (265)
T ss_dssp CEEETTE---EESCCEEECCSCSS-S----HHHHHHHHHHSCCSEEEEEGGGCCC--------------------CTTTS
T ss_pred CeEECCE---EeecceEEecCCCC-C----HHHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHh-h----h--hhcCC
Confidence 4667663 34589999999864 2 33456665 456555533310000 000011222 1 1 33334
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHH-HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc
Q 044053 90 FITSKLWCQNAHRDHVIPALKKSLS-ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK 168 (327)
Q Consensus 90 ~I~tK~~~~~~~~~~i~~~le~SL~-rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir 168 (327)
.+-=... ...+.+...+..+-..+ -+++++|-|..+..+... ..+..+++++.+.|+++|-.-
T Consensus 75 ~~lpNTa-g~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~l---------------lpD~~~tv~aa~~L~~~Gf~V 138 (265)
T 1wv2_A 75 TILPNTA-GCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTL---------------FPNVVETLKAAEQLVKDGFDV 138 (265)
T ss_dssp EEEEECT-TCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTC---------------CBCHHHHHHHHHHHHTTTCEE
T ss_pred EECCcCC-CCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCcccc---------------CcCHHHHHHHHHHHHHCCCEE
Confidence 3332221 23455666666666677 778888887776544322 235889999999999999543
Q ss_pred EEEeccccHHHHHHHHHh
Q 044053 169 SIGLSNFSCKKIETILTF 186 (327)
Q Consensus 169 ~iGvS~~~~~~l~~~~~~ 186 (327)
+=+++-++....++.+.
T Consensus 139 -lpy~~dd~~~akrl~~~ 155 (265)
T 1wv2_A 139 -MVYTSDDPIIARQLAEI 155 (265)
T ss_dssp -EEEECSCHHHHHHHHHS
T ss_pred -EEEeCCCHHHHHHHHHh
Confidence 34466666666555553
No 114
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=41.65 E-value=2.1e+02 Score=26.18 Aligned_cols=151 Identities=15% Similarity=0.123 Sum_probs=87.9
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCC-------CcCC--------------------------HHH--HHHHHHHHHhcCC
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAA-------MYGT--------------------------EKA--LGEAIAEALRLGL 82 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~-------~Ygs--------------------------E~~--lG~~L~~~~~~g~ 82 (327)
.+.++..+.++.+++.|++.|-.-- .||. +.. +=+++++.+
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~---- 217 (418)
T 3r4e_A 142 SDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTY---- 217 (418)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHc----
Confidence 4567788888999999999885311 1220 111 113444431
Q ss_pred CCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 044053 83 VSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQ 162 (327)
Q Consensus 83 ~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 162 (327)
-+++-|..... ...+.+...+ +-+.|+.+++++| ..|.+.. -++.+.+++
T Consensus 218 ---G~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~--------------------d~~~~~~l~ 267 (418)
T 3r4e_A 218 ---GFDHHLLHDGH-HRYTPQEAAN-LGKMLEPYQLFWL-----EDCTPAE--------------------NQEAFRLVR 267 (418)
T ss_dssp ---CSSSEEEEECT-TCSCHHHHHH-HHHHHGGGCCSEE-----ESCSCCS--------------------SGGGGHHHH
T ss_pred ---CCCCeEEEeCC-CCCCHHHHHH-HHHHHHhhCCCEE-----ECCCCcc--------------------CHHHHHHHH
Confidence 23455555543 2344444433 2335666665554 4553210 124566677
Q ss_pred HcCCccE-EEeccccHHHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 163 MLGLTKS-IGLSNFSCKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 163 ~~Gkir~-iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
++-.|.= .|=+-++...++++++.... +++|+...-+ ..-.++...|+++|+.++..+++
T Consensus 268 ~~~~iPIa~dE~~~~~~~~~~~l~~~a~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 268 QHTVTPLAVGEIFNTIWDAKDLIQNQLI--DYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp HHCCSCEEECTTCCSGGGTHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred hcCCCCEEEcCCcCCHHHHHHHHHcCCC--CeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 7655553 34455678888888886543 4777776554 22367899999999999988775
No 115
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=41.52 E-value=2e+02 Score=25.95 Aligned_cols=66 Identities=15% Similarity=-0.036 Sum_probs=39.5
Q ss_pred HHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHh
Q 044053 107 PALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTF 186 (327)
Q Consensus 107 ~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~ 186 (327)
..+-+.|+..|+|||++ |....... + ... -++.+.++++.=.+--|++..++++..+++++.
T Consensus 258 ~~la~~le~~Gvd~i~v---~~~~~~~~-----~-~~~---------~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~ 319 (377)
T 2r14_A 258 FYLAGELDRRGLAYLHF---NEPDWIGG-----D-ITY---------PEGFREQMRQRFKGGLIYCGNYDAGRAQARLDD 319 (377)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCC------------CC---------CTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEE---eCCcccCC-----C-Ccc---------hHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHC
Confidence 34556777888777765 54321100 0 000 124455666665677888888888999999987
Q ss_pred CCCC
Q 044053 187 ATIP 190 (327)
Q Consensus 187 ~~~~ 190 (327)
...+
T Consensus 320 g~aD 323 (377)
T 2r14_A 320 NTAD 323 (377)
T ss_dssp TSCS
T ss_pred CCce
Confidence 6544
No 116
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=41.40 E-value=51 Score=24.37 Aligned_cols=64 Identities=11% Similarity=0.064 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 151 YRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 151 ~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
.+.+...|....+.|++. ....+..+.++......+++--..++ ....++..+|..++|+++-+
T Consensus 11 ~~~i~~~L~la~kagk~~------~G~~~t~kai~~gkakLVilA~D~~~-~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 11 GENINNKLQLVMKSGKYT------LGYKTVLKTLRSSLGKLIILANNCPP-LRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp GGHHHHHHHHHHTTCEEE------ESHHHHHHHHHTTCCSEEEECSCCCH-HHHHHHHHHHHHTTCCEECC
T ss_pred HHHHHHHHHHHHHhCCee------ECHHHHHHHHHcCCceEEEEeCCCCH-HHHHHHHHHHHHcCCcEEEe
Confidence 567888999999999864 34567788888877777777666665 34477889999999999977
No 117
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=41.35 E-value=1e+02 Score=27.06 Aligned_cols=120 Identities=15% Similarity=0.039 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHHHHcCCccEEEeccc-----cHHHHHHHHHhCC-CCCeeeecccCcccccHHHHHHHHHcCCEEEEec
Q 044053 149 MDYRGVWEAMEESQMLGLTKSIGLSNF-----SCKKIETILTFAT-IPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 149 ~~~~~~~~~l~~l~~~Gkir~iGvS~~-----~~~~l~~~~~~~~-~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~ 222 (327)
++.+++.+.++++++.| ++.|-++.- ..+.+.++++... ....+ ..|......+.++..++.|+..+..+
T Consensus 84 ls~eei~~~i~~~~~~g-~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i---~~s~g~l~~e~l~~L~~ag~~~v~i~ 159 (348)
T 3iix_A 84 MTPEEIVERARLAVQFG-AKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAV---TLSLGEWPREYYEKWKEAGADRYLLR 159 (348)
T ss_dssp CCHHHHHHHHHHHHHTT-CSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEE---EEECCCCCHHHHHHHHHHTCCEEECC
T ss_pred CCHHHHHHHHHHHHHCC-CCEEEEEeCCCCCccHHHHHHHHHHHHhcCceE---EEecCCCCHHHHHHHHHhCCCEEeee
Confidence 56899999999999987 555555432 2255555554432 12111 23333345788888999898776532
Q ss_pred CCCCCCccCCCCcccChHHHHHHHHHcCCCHHHHHHHHHHhcC----CEEeecC--CCHHHHHHhhc
Q 044053 223 PLGAVGKIYGSNQVLENEALKEIAKAHGKTVAQVSLRWIVEQG----ATVVVKS--LNLERMKQNLG 283 (327)
Q Consensus 223 pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~~~----~~vi~g~--~~~~~l~enl~ 283 (327)
.=+ ...+....+.......-.--+++++...| ..+++|. .+.+++.+.+.
T Consensus 160 let-----------~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~ 215 (348)
T 3iix_A 160 HET-----------ANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLL 215 (348)
T ss_dssp CBC-----------SCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHH
T ss_pred eee-----------CCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHH
Confidence 221 11233333332221111223556666666 3456776 57777776553
No 118
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=41.18 E-value=96 Score=27.23 Aligned_cols=101 Identities=12% Similarity=0.060 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHH
Q 044053 103 DHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIET 182 (327)
Q Consensus 103 ~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~ 182 (327)
..-+..+-+.|.++|+++|.+-..-.|... + . ..+.++.+..+.+...++..++. -+...++.
T Consensus 27 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p-------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~ 89 (307)
T 1ydo_A 27 TEDKITWINQLSRTGLSYIEITSFVHPKWI-P-------------A--LRDAIDVAKGIDREKGVTYAALV-PNQRGLEN 89 (307)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEEECSCTTTC-G-------------G--GTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCcccc-c-------------c--cCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHH
Confidence 344566677889999999999865444210 0 0 11223344455445566666666 35677888
Q ss_pred HHHhCCCCCeeeecccCccc--------------ccHHHHHHHHHcCCEEEEe
Q 044053 183 ILTFATIPPSINQVEMHPVW--------------QQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 183 ~~~~~~~~~~~~q~~~~~~~--------------~~~~ll~~~~~~gi~v~a~ 221 (327)
+++. +++...+-...|..+ .-.+.+++++++|+.+.++
T Consensus 90 a~~~-g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~ 141 (307)
T 1ydo_A 90 ALEG-GINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY 141 (307)
T ss_dssp HHHH-TCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHhC-CcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 8775 343222222333221 0156799999999998653
No 119
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=41.15 E-value=2e+02 Score=25.93 Aligned_cols=148 Identities=16% Similarity=0.183 Sum_probs=88.6
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC-CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhC
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 117 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~ 117 (327)
+.++..+.++.+++.|++.|=.=-.-+ ..+.+ +++++. - .++-|..-.. ...+.+...+ + +.|+.+
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~~~~d~~~v-~avR~~-------~-~~~~l~vDaN-~~~~~~~A~~-~-~~l~~~- 215 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIAPGRDRAAI-KAVRLR-------Y-PDLAIAADAN-GSYRPEDAPV-L-RQLDAY- 215 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECBTTBSHHHH-HHHHHH-------C-TTSEEEEECT-TCCCGGGHHH-H-HHGGGG-
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHH-HHHHHH-------C-CCCeEEEECC-CCCChHHHHH-H-HHHhhC-
Confidence 367788888889999999863211112 23333 456654 3 3444444432 2344555443 3 334443
Q ss_pred CCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeeec
Q 044053 118 MEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQV 196 (327)
Q Consensus 118 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q~ 196 (327)
++.++-.|.+.+ -++.+.++.+.-.|. ..|=|.++...+.++++.... +++|+
T Consensus 216 ----~i~~iEeP~~~~--------------------d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~--d~v~~ 269 (388)
T 3qld_A 216 ----DLQFIEQPLPED--------------------DWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAA--RVLNV 269 (388)
T ss_dssp ----CCSCEECCSCTT--------------------CHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC--SEEEE
T ss_pred ----CCcEEECCCCcc--------------------cHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC--CEEEE
Confidence 555666664321 135666676654443 567777889999998886543 46776
Q ss_pred ccCcc---cccHHHHHHHHHcCCEEEEecCCC
Q 044053 197 EMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 197 ~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
..+.+ ..-.++...|+++|+.++..+.+.
T Consensus 270 k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 301 (388)
T 3qld_A 270 KPGRLGGFGATLRALDVAGEAGMAAWVGGMYE 301 (388)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred CchhhCCHHHHHHHHHHHHHCCCeEEecCccc
Confidence 65443 223679999999999998766554
No 120
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=39.54 E-value=85 Score=23.96 Aligned_cols=64 Identities=13% Similarity=0.123 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 152 RGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 152 ~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
..+++.|....+.|++. . ...+..++++......+++--..++..-...+..+|+++||.++-.
T Consensus 18 ~ki~~~L~lA~k~gkl~-~-----G~~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v 81 (134)
T 2ale_A 18 QQILDVVQQAANLRQLK-K-----GANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFV 81 (134)
T ss_dssp HHHHHHHHHHHHTTCEE-E-----SHHHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHcCCcc-c-----CchHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 45667788888899865 2 4567778888777666777666666544467889999999998754
No 121
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=39.30 E-value=2.1e+02 Score=25.65 Aligned_cols=152 Identities=14% Similarity=-0.006 Sum_probs=81.9
Q ss_pred ChHHHHHHHHHHHH-cCCCEEeCCCCcCC-HHHH--HHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIK-LGYRHFDTAAMYGT-EKAL--GEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gi~~~DTA~~Ygs-E~~l--G~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+....+++ .|++.|-.=-.-.. +..+ =+++++. -.+++-|...... ..+.+...+ +-+.|+
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a-------~g~~~~l~vDaN~-~~~~~~A~~-~~~~l~ 217 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEA-------LGDRASIRVDVNQ-AWDAATGAK-GCRELA 217 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHH-------TCTTCEEEEECTT-CBCHHHHHH-HHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHH-------cCCCCeEEEECCC-CCCHHHHHH-HHHHHh
Confidence 34444444555665 68998754221111 2222 2345543 2345556555432 334444333 233555
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++. ++-.|.+. +-++.+.++++.-.|. ..|=|.++...+.++++.... ++
T Consensus 218 ~~~i~-----~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~--d~ 270 (381)
T 3fcp_A 218 AMGVD-----LIEQPVSA--------------------HDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFT--GA 270 (381)
T ss_dssp HTTCS-----EEECCBCT--------------------TCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCC--SE
T ss_pred hcCcc-----ceeCCCCc--------------------ccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCC--CE
Confidence 56544 44455321 1246666777654443 456667888899988876543 46
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+|+...-+ ..-.++...|+++|+.++..+.+.+
T Consensus 271 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 306 (381)
T 3fcp_A 271 YALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEG 306 (381)
T ss_dssp EEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCC
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCceecCCCCcc
Confidence 77665433 2236789999999999987666643
No 122
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=39.11 E-value=1.5e+02 Score=26.82 Aligned_cols=146 Identities=11% Similarity=0.099 Sum_probs=83.1
Q ss_pred ChHHHHHHHHHHHHc---CCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKL---GYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKS 112 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~---Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~S 112 (327)
+.++..+.++.+++. |++.|-.=-... .+...=+++++.+ .+++-|..... ...+.+...+ +-+.
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~-------G~~~~l~vDaN-~~~~~~~A~~-~~~~ 241 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAV-------GRDTALMVDFN-QGLDMAEAMH-RTRQ 241 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCCCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHh-------CCCCEEEEECC-CCCCHHHHHH-HHHH
Confidence 456777778888889 999885432211 1111223455431 23455555542 2334443322 2234
Q ss_pred HHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCC
Q 044053 113 LSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPP 191 (327)
Q Consensus 113 L~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~ 191 (327)
|+.+++ .++..|.+. +-++.+.++++.-.|. ..|=+.++...+.++++....
T Consensus 242 l~~~~i-----~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~-- 294 (390)
T 3ugv_A 242 IDDLGL-----EWIEEPVVY--------------------DNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGAC-- 294 (390)
T ss_dssp HTTSCC-----SEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--
T ss_pred HHhhCC-----CEEECCCCc--------------------ccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCC--
Confidence 444444 444555321 1245667777665554 455667889999999886543
Q ss_pred eeeecccCcc---cccHHHHHHHHHcCCEEEE
Q 044053 192 SINQVEMHPV---WQQRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 192 ~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a 220 (327)
+++|+...-+ ..-.++...|+++|+.++.
T Consensus 295 d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~ 326 (390)
T 3ugv_A 295 DLVMPDFMRIGGVSGWMRAAGVAGAWGIPMST 326 (390)
T ss_dssp SEECCBHHHHTHHHHHHHHHHHHHHHTCCBCC
T ss_pred CEEEeCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 4676665443 2226789999999999864
No 123
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=38.89 E-value=1.9e+02 Score=24.86 Aligned_cols=99 Identities=12% Similarity=-0.039 Sum_probs=66.2
Q ss_pred hhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHH
Q 044053 102 RDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIE 181 (327)
Q Consensus 102 ~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~ 181 (327)
.+.+.+..++.. .-|-|.||+-.--.. ....+.+...++.+++.-.+ -|.|-+++++.++
T Consensus 33 ~~~a~~~a~~~v-~~GAdiIDIg~~s~~------------------~eE~~rv~~vi~~l~~~~~~-pisIDT~~~~v~~ 92 (271)
T 2yci_X 33 PRPIQEWARRQA-EKGAHYLDVNTGPTA------------------DDPVRVMEWLVKTIQEVVDL-PCCLDSTNPDAIE 92 (271)
T ss_dssp CHHHHHHHHHHH-HTTCSEEEEECCSCS------------------SCHHHHHHHHHHHHHHHCCC-CEEEECSCHHHHH
T ss_pred HHHHHHHHHHHH-HCCCCEEEEcCCcCc------------------hhHHHHHHHHHHHHHHhCCC-eEEEeCCCHHHHH
Confidence 455555554444 578888887643211 11256677777777765222 3788889999999
Q ss_pred HHHHhCCCCCeeeecccCccccc--HHHHHHHHHcCCEEEEecC
Q 044053 182 TILTFATIPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 182 ~~~~~~~~~~~~~q~~~~~~~~~--~~ll~~~~~~gi~v~a~~p 223 (327)
.+++.+.-...+|-+.. .. + +++++.|+++|..++.+..
T Consensus 93 aal~a~~Ga~iINdvs~--~~-d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 93 AGLKVHRGHAMINSTSA--DQ-WKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp HHHHHCCSCCEEEEECS--CH-HHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHhCCCCCEEEECCC--Cc-cccHHHHHHHHHcCCCEEEEec
Confidence 99998644455664433 32 4 6799999999999999865
No 124
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=38.72 E-value=2.2e+02 Score=25.54 Aligned_cols=147 Identities=14% Similarity=0.169 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHcCCCEEeCCC-CcC-C-HHH--HHHHHHHHHhcCCCCCCCcEEEEeccCCCCCC-hhhHHHHHHHHHH
Q 044053 41 DALKLAVLEAIKLGYRHFDTAA-MYG-T-EKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAH-RDHVIPALKKSLS 114 (327)
Q Consensus 41 ~~~~~~l~~A~~~Gi~~~DTA~-~Yg-s-E~~--lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~-~~~i~~~le~SL~ 114 (327)
++..+..+.+.+.|++.|..=- .+| + +.. .=+++++.+ -+++-|...... ..+ .+...+ +-+.|+
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~-------g~~~~l~vDan~-~~~d~~~A~~-~~~~l~ 218 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAA-------GPEMEVQIDLAS-KWHTCGHSAM-MAKRLE 218 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHH-------CSSSEEEEECTT-TTCSHHHHHH-HHHHSG
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHh-------CCCCeEEEECCC-CCCCHHHHHH-HHHHhh
Confidence 6677778889999999987532 232 2 221 223455431 234555555432 233 333332 233556
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++| ..|.+. +-++.+.++++.-.|- ..|=+-++...++++++.... ++
T Consensus 219 ~~~i~~i-----EqP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~ 271 (374)
T 3sjn_A 219 EFNLNWI-----EEPVLA--------------------DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNA--DI 271 (374)
T ss_dssp GGCCSEE-----ECSSCT--------------------TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCC--SE
T ss_pred hcCceEE-----ECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCC--CE
Confidence 6665544 445321 1246677777765554 344456778889988876543 47
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEecC
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~p 223 (327)
+|+...-. ..-..+...|+++|+.++..+.
T Consensus 272 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 272 VQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp ECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 77666554 2226789999999999987655
No 125
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=38.66 E-value=2.2e+02 Score=25.72 Aligned_cols=151 Identities=12% Similarity=0.203 Sum_probs=89.2
Q ss_pred CChHHHHHHHHHHHHcCCCEEeCCC-CcC-------------------C----HHH--HHHHHHHHHhcCCCCCCCcEEE
Q 044053 38 SDTDALKLAVLEAIKLGYRHFDTAA-MYG-------------------T----EKA--LGEAIAEALRLGLVSSREQLFI 91 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~DTA~-~Yg-------------------s----E~~--lG~~L~~~~~~g~~~~R~~v~I 91 (327)
.+.++..+.++.+++.|++.|-.-- .++ . +.. +=+++++.+ -+++-|
T Consensus 132 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~-------G~d~~l 204 (401)
T 3sbf_A 132 DTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKY-------GNQFHI 204 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH-------TTSSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHc-------CCCCEE
Confidence 3567788888899999999886311 011 0 111 123455432 234555
Q ss_pred EeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EE
Q 044053 92 TSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SI 170 (327)
Q Consensus 92 ~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~i 170 (327)
..... ...+.+...+ +-+.|+.+++++|. .|.+. +-++.+.++++.-.|- ..
T Consensus 205 ~vDan-~~~~~~~A~~-~~~~L~~~~i~~iE-----qP~~~--------------------~~~~~~~~l~~~~~iPIa~ 257 (401)
T 3sbf_A 205 LHDVH-ERLFPNQAIQ-FAKEVEQYKPYFIE-----DILPP--------------------NQTEWLDNIRSQSSVSLGL 257 (401)
T ss_dssp EEECT-TCSCHHHHHH-HHHHHGGGCCSCEE-----CSSCT--------------------TCGGGHHHHHTTCCCCEEE
T ss_pred EEECC-CCCCHHHHHH-HHHHHHhcCCCEEE-----CCCCh--------------------hHHHHHHHHHhhCCCCEEe
Confidence 55543 2344444333 22356777766554 44321 1135567777765554 34
Q ss_pred EeccccHHHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecCC
Q 044053 171 GLSNFSCKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 171 GvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl 224 (327)
|=+-++...++++++.... +++|+...-. ..-..+...|+.+|+.++.+++.
T Consensus 258 dE~~~~~~~~~~~i~~~~~--d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 258 GELFNNPEEWKSLIANRRI--DFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp CTTCCSHHHHHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred CCccCCHHHHHHHHhcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 4566788999999886544 4777766543 22367899999999999877663
No 126
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=38.54 E-value=36 Score=29.70 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHhCCCcee
Q 044053 103 DHVIPALKKSLSALQMEYLD 122 (327)
Q Consensus 103 ~~i~~~le~SL~rL~~d~iD 122 (327)
+.+.+.+-.-++.-|...++
T Consensus 108 d~lL~~i~~~~e~~G~~vi~ 127 (283)
T 4ggi_A 108 DALLRRVLDEFEKEGFEIEG 127 (283)
T ss_dssp THHHHHHHHHHHHTTCCCCC
T ss_pred chhHHHHHHHHHhCCcceec
Confidence 45677777888887765554
No 127
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=38.39 E-value=2.2e+02 Score=25.58 Aligned_cols=148 Identities=11% Similarity=0.045 Sum_probs=85.4
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC----HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs----E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+..+.+.+.|++.|..--.-++ .+.| +++++.+ | +++.|..... ..++.+...+-++. |+
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~--g-----~~~~l~vDan-~~~~~~~a~~~~~~-l~ 234 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRI-EAVLEEI--G-----KDAQLAVDAN-GRFNLETGIAYAKM-LR 234 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHH-HHHHHHH--T-----TTCEEEEECT-TCCCHHHHHHHHHH-HT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhc--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HH
Confidence 5667777788888999998863211122 2223 3444431 2 3455555542 23455555444443 66
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-eccccHHHHHHHHHhCC--CCC
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSCKKIETILTFAT--IPP 191 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iG-vS~~~~~~l~~~~~~~~--~~~ 191 (327)
.+++++| ..|... +-++.+.+++++-.|-=.+ =+-++...++++++... ...
T Consensus 235 ~~~i~~i-----EqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~ 289 (392)
T 1tzz_A 235 DYPLFWY-----EEVGDP--------------------LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDR 289 (392)
T ss_dssp TSCCSEE-----ECCSCT--------------------TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTT
T ss_pred HcCCCee-----cCCCCh--------------------hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCC
Confidence 6665543 444221 1256777777766565433 34467889999988761 123
Q ss_pred eeeecccCcc---cccHHHHHHHHHcCCE---EEEe
Q 044053 192 SINQVEMHPV---WQQRKLIEFCKAKGII---VTAY 221 (327)
Q Consensus 192 ~~~q~~~~~~---~~~~~ll~~~~~~gi~---v~a~ 221 (327)
+++|+..+-. ..-.++..+|+++|+. ++..
T Consensus 290 d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 290 DWLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp CEECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCCS
T ss_pred cEEEECccccCCHHHHHHHHHHHHHCCCCCceEeec
Confidence 4676665543 2226789999999998 7665
No 128
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=37.77 E-value=1.7e+02 Score=24.06 Aligned_cols=71 Identities=18% Similarity=0.154 Sum_probs=46.1
Q ss_pred HHHHHH-HHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccc-------cHHHHHHHHHcCCEEEEec
Q 044053 151 YRGVWE-AMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQ-------QRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 151 ~~~~~~-~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~-------~~~ll~~~~~~gi~v~a~~ 222 (327)
-+++++ +.+++++.| |++|=|.+-+.....++++...-. ++-+.++.-+. .++..+..++.|+.|+.-+
T Consensus 36 T~~tl~la~era~e~~-Ik~iVVASssG~TA~k~~e~~~~~--lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~t 112 (206)
T 1t57_A 36 TERVLELVGERADQLG-IRNFVVASVSGETALRLSEMVEGN--IVSVTHHAGFREKGQLELEDEARDALLERGVNVYAGS 112 (206)
T ss_dssp HHHHHHHHHHHHHHHT-CCEEEEECSSSHHHHHHHTTCCSE--EEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEECCS
T ss_pred HHHHHHHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHccCC--EEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEee
Confidence 455655 455555555 999999999888877777754112 22223332222 2789999999999998755
Q ss_pred CC
Q 044053 223 PL 224 (327)
Q Consensus 223 pl 224 (327)
=+
T Consensus 113 H~ 114 (206)
T 1t57_A 113 HA 114 (206)
T ss_dssp CT
T ss_pred cc
Confidence 33
No 129
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=37.75 E-value=1e+02 Score=23.05 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEE
Q 044053 151 YRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 151 ~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a 220 (327)
...++..|....+.|++. .| ..+..++++......+++--..++..-...+..+|+++||.++-
T Consensus 16 ~~kil~~L~lA~kagklv-~G-----~~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~ 79 (122)
T 3o85_A 16 SLELLNLVKHGASLQAIK-RG-----ANEALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVF 79 (122)
T ss_dssp HHHHHHHHHHHHHTTCEE-ES-----HHHHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHHHHHhCCEe-Ec-----HHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEE
Confidence 455778888889999865 33 56777888877777777766666643335688899999998654
No 130
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=37.43 E-value=80 Score=22.53 Aligned_cols=61 Identities=11% Similarity=0.045 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 154 VWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 154 ~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
+...|...++.|++. ....+..++++......+++--. .+-.....+..+|++++|+++.|
T Consensus 4 i~~~L~la~kagkl~------~G~~~v~kai~~gka~lViiA~D-~~~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 4 FAFELRKAQDTGKIV------MGARKSIQYAKMGGAKLIIVARN-ARPDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp HHHHHHHHHHHSEEE------ESHHHHHHHHHHTCCSEEEEETT-SCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCEe------ECHHHHHHHHHcCCCcEEEEeCC-CCHHHHHHHHHHHHhcCCCEEEe
Confidence 456677777788755 23567777777776665555444 23233367888899999998765
No 131
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=37.17 E-value=1e+02 Score=22.77 Aligned_cols=62 Identities=15% Similarity=0.139 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEE
Q 044053 152 RGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVT 219 (327)
Q Consensus 152 ~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~ 219 (327)
..+.+.|....+.|++. ....+..++++......+++--..++......+..+|+++||+++
T Consensus 15 ~~i~~~L~~A~kag~l~------~G~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~ 76 (120)
T 1vq8_F 15 DDALEALEVARDTGAVK------KGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFI 76 (120)
T ss_dssp HHHHHHHHHHHHSSCEE------ESHHHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHHHcCCEe------ECHHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEE
Confidence 45667777788888865 245677788887777766766666664434668889999999864
No 132
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=37.08 E-value=1.5e+02 Score=25.92 Aligned_cols=101 Identities=11% Similarity=0.061 Sum_probs=59.9
Q ss_pred hhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----cCCccEEEeccccH
Q 044053 102 RDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQM----LGLTKSIGLSNFSC 177 (327)
Q Consensus 102 ~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~----~Gkir~iGvS~~~~ 177 (327)
++.+.+..++.. .-|-|.||+=. +. . ..+.++.++.+..+.+ .-.+ -|-|-++.+
T Consensus 36 ~~~a~~~A~~~v-~~GAdiIDIg~----g~-~--------------~v~~~eem~rvv~~i~~~~~~~~v-pisIDT~~~ 94 (300)
T 3k13_A 36 YDEALSIARQQV-EDGALVIDVNM----DD-G--------------LLDARTEMTTFLNLIMSEPEIARV-PVMIDSSKW 94 (300)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEEC----CC-T--------------TSCHHHHHHHHHHHHHTCHHHHTS-CEEEECSCH
T ss_pred HHHHHHHHHHHH-HCCCCEEEECC----CC-C--------------CCCHHHHHHHHHHHHHHhhhcCCC-eEEEeCCCH
Confidence 444444444444 46889999865 11 0 1223333333333332 1112 478888999
Q ss_pred HHHHHHHHhCCCCCeeeecccCccccc-HHHHHHHHHcCCEEEEecC
Q 044053 178 KKIETILTFATIPPSINQVEMHPVWQQ-RKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 178 ~~l~~~~~~~~~~~~~~q~~~~~~~~~-~~ll~~~~~~gi~v~a~~p 223 (327)
+.++.+++.+.-...+|-+..-..... .++++.++++|..++.+.-
T Consensus 95 ~V~eaaL~~~~Ga~iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 95 EVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp HHHHHHHHHCSSCCEEEEECSTTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred HHHHHHHHhcCCCCEEEeCCcccCChhHHHHHHHHHHhCCeEEEEee
Confidence 999999996433456664443222211 3799999999999998754
No 133
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=35.76 E-value=1.8e+02 Score=23.74 Aligned_cols=90 Identities=10% Similarity=0.003 Sum_probs=53.1
Q ss_pred HHHHHHHcCCccEEEecccc------HHHHHHHHHhCCCCCeeeecccCccccc------------HHHHHHHHHcCCEE
Q 044053 157 AMEESQMLGLTKSIGLSNFS------CKKIETILTFATIPPSINQVEMHPVWQQ------------RKLIEFCKAKGIIV 218 (327)
Q Consensus 157 ~l~~l~~~Gkir~iGvS~~~------~~~l~~~~~~~~~~~~~~q~~~~~~~~~------------~~ll~~~~~~gi~v 218 (327)
....+.+. .|.-||--... ...+.++....++ .+.++++.+.+. ..++..|++.|+.+
T Consensus 88 ~n~~a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv---~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~i 163 (212)
T 1v77_A 88 VIRYSIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNV---ALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRR 163 (212)
T ss_dssp HHHHHHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTC---EEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHhC-CCCEEecccccccCCCCCHHHHHHHHHCCe---EEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCE
Confidence 44456677 89888865422 1233333333333 455555554211 47899999999988
Q ss_pred EEecCCCCCCccCCCCcccChHHHHHHHHHcCCCHHHH
Q 044053 219 TAYSPLGAVGKIYGSNQVLENEALKEIAKAHGKTVAQV 256 (327)
Q Consensus 219 ~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~ 256 (327)
+.-|=-.. +..+-....+..+++..|.+..++
T Consensus 164 visSDAh~------~~~v~~~~~~~~l~~~~G~~~e~~ 195 (212)
T 1v77_A 164 FLTSSAQE------KWDVRYPRDLISLGVVIGMEIPQA 195 (212)
T ss_dssp EEECCCSS------GGGCCCHHHHHHHHHHTTCCHHHH
T ss_pred EEeCCCCC------hhhcCCHHHHHHHHHHcCCCHHHH
Confidence 76543322 122334567888888888877654
No 134
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=34.68 E-value=2.5e+02 Score=25.68 Aligned_cols=78 Identities=10% Similarity=0.117 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHH-HHcCC------ccEEEecc--ccHHHHHHHHHhCC-CCCeeeecccCccccc----------HHHH
Q 044053 149 MDYRGVWEAMEES-QMLGL------TKSIGLSN--FSCKKIETILTFAT-IPPSINQVEMHPVWQQ----------RKLI 208 (327)
Q Consensus 149 ~~~~~~~~~l~~l-~~~Gk------ir~iGvS~--~~~~~l~~~~~~~~-~~~~~~q~~~~~~~~~----------~~ll 208 (327)
..+++++++++++ .+.|. |+++=+-. -+.+++.++.+... .+..++-++||++... ..+.
T Consensus 252 ~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~~VnLIpynP~~~~~~~~ps~e~i~~f~ 331 (404)
T 3rfa_A 252 YNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFS 331 (404)
T ss_dssp SCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEEEEEECCCCTTCCCCBCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCCcEEEEeccCCCCCCCCCCCHHHHHHHH
Confidence 3578899999665 45565 45655554 34777888877654 4455777888886321 3466
Q ss_pred HHHHHcCCEEEEecCCCC
Q 044053 209 EFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 209 ~~~~~~gi~v~a~~pl~~ 226 (327)
+.++++|+.+....+.|.
T Consensus 332 ~iL~~~Gi~vtiR~~~G~ 349 (404)
T 3rfa_A 332 KVLMSYGFTTIVRKTRGD 349 (404)
T ss_dssp HHHHHTTCEEEECCCCCC
T ss_pred HHHHHcCCcEEEcCCCCc
Confidence 778899999999887764
No 135
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=34.40 E-value=2.6e+02 Score=25.22 Aligned_cols=145 Identities=10% Similarity=0.056 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHcCCCEEeC-CCCc--CC-HH--HHHHHHHHHHhcCCCCCCCcEEEEeccCCCCC-ChhhHHHHHHHHHH
Q 044053 42 ALKLAVLEAIKLGYRHFDT-AAMY--GT-EK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNA-HRDHVIPALKKSLS 114 (327)
Q Consensus 42 ~~~~~l~~A~~~Gi~~~DT-A~~Y--gs-E~--~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~-~~~~i~~~le~SL~ 114 (327)
+..+.++.+.+.|++.|=. --.. .+ +. .+=+++++.+ | +++-|..... ... +.+...+-+ +.|+
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~--G-----~d~~l~vDaN-~~~~~~~~A~~~~-~~L~ 230 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGIL--G-----HDTDMMVDYL-YRFTDWYEVARLL-NSIE 230 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHH--C-----SSSEEEEECT-TCCCCHHHHHHHH-HHTG
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHh--C-----CCCeEEEeCC-CCCCCHHHHHHHH-HHhh
Confidence 4555777888999999865 2111 11 11 1223455442 2 3444554542 233 444433332 3455
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++ +..|.+. +-++.+.++++.-.|. ..|=+.++...++++++.... ++
T Consensus 231 ~~~i~~-----iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~ 283 (394)
T 3mkc_A 231 DLELYF-----AEATLQH--------------------DDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKV--HL 283 (394)
T ss_dssp GGCCSE-----EESCSCT--------------------TCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCC--SE
T ss_pred hcCCeE-----EECCCCc--------------------hhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC--Ce
Confidence 565544 4455321 1245667777765554 444556778889999886544 47
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEec
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~ 222 (327)
+|+...-+ ..-..+...|+++|+.++..+
T Consensus 284 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 315 (394)
T 3mkc_A 284 LQSDYNRCGGLTELRRITEMATANNVQVMPHN 315 (394)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 77776554 223678999999999998655
No 136
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=34.38 E-value=2.5e+02 Score=25.02 Aligned_cols=146 Identities=13% Similarity=0.089 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeC--CCC-cC---C----HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDT--AAM-YG---T----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPA 108 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DT--A~~-Yg---s----E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~ 108 (327)
+.++..+..+.+.+.|++.|.. +.. |+ . .+.+ +++++.+ | +++-|..+.. ...+.+...+-
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v-~avr~a~--g-----~d~~l~vDan-~~~~~~~a~~~ 219 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKAC-AAVREAV--G-----PDIRLMIDAF-HWYSRTDALAL 219 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHH-HHHHHHH--C-----TTSEEEEECC-TTCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHH-HHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHH
Confidence 5667777788888999999863 322 22 1 1222 3444431 2 3555555653 33455555554
Q ss_pred HHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-Eecccc-HHHHHHHHHh
Q 044053 109 LKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFS-CKKIETILTF 186 (327)
Q Consensus 109 le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~i-GvS~~~-~~~l~~~~~~ 186 (327)
+ +.|+.+++++| ..|.+. +-++.+.++++.-.|-=+ |=+.++ ...++++++.
T Consensus 220 ~-~~l~~~~i~~i-----E~P~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~ 273 (382)
T 1rvk_A 220 G-RGLEKLGFDWI-----EEPMDE--------------------QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKA 273 (382)
T ss_dssp H-HHHHTTTCSEE-----ECCSCT--------------------TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHT
T ss_pred H-HHHHhcCCCEE-----eCCCCh--------------------hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHc
Confidence 4 35777776644 444221 125667777766555533 344567 8899999886
Q ss_pred CCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEe
Q 044053 187 ATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 187 ~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~ 221 (327)
... +++|+..+-. ..-.++..+|+++|+.++..
T Consensus 274 ~~~--d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 274 GAC--DILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp TCC--SEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCC--CEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 544 4676655432 22267899999999999886
No 137
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=34.29 E-value=2.6e+02 Score=25.15 Aligned_cols=146 Identities=10% Similarity=0.095 Sum_probs=84.4
Q ss_pred ChHHHHHHHHHHHHc-CCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKL-GYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+.++.+++. |++.|-.=-... .+...=+++++.+ -+++-|..... ...+.+...+ +-+.|+
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~-------G~~~~l~vDaN-~~~~~~~A~~-~~~~l~ 237 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALL-------GPDIALMLDFN-QSLDPAEATR-RIARLA 237 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCSCHHHHHH-HHHHHG
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHh-------CCCCeEEEeCC-CCCCHHHHHH-HHHHHH
Confidence 567777888888999 999885432211 1111223455431 23445555542 2334444333 234556
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++++| ..|.+. +-++.+.+++++-.|. ..|=+.++...+.++++.... ++
T Consensus 238 ~~~i~~i-----EeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~ 290 (383)
T 3toy_A 238 DYDLTWI-----EEPVPQ--------------------ENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGAS--DF 290 (383)
T ss_dssp GGCCSEE-----ECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCC--SE
T ss_pred hhCCCEE-----ECCCCc--------------------chHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCC--CE
Confidence 6665444 455321 1245667777765554 445566778889888876644 47
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEE
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a 220 (327)
+|+...-+ ..-..+...|+++|+.++.
T Consensus 291 v~ik~~~~GGit~~~~ia~~A~~~gi~~~~ 320 (383)
T 3toy_A 291 IMPDLMKVGGITGWLNVAGQADAASIPMSS 320 (383)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHHTCCBCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 77666543 2226789999999999754
No 138
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=33.68 E-value=2.3e+02 Score=24.73 Aligned_cols=64 Identities=11% Similarity=0.141 Sum_probs=45.2
Q ss_pred HHHHHHHHHHc-CCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecC
Q 044053 154 VWEAMEESQML-GLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 154 ~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~p 223 (327)
+...++.++++ +. -|.|-++.++.++.+++.. ...+|-+ +.....+++++.+++.|..++.+..
T Consensus 103 vvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aG--a~iINdv--sg~~~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 103 VVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAG--AHIINDI--WGAKAEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp HHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHT--CCEEEET--TTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcC--CCEEEEC--CCCCCCHHHHHHHHHhCCcEEEEeC
Confidence 44445666654 32 3788899999999999974 2345533 3333357899999999999999865
No 139
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=32.43 E-value=1.1e+02 Score=23.33 Aligned_cols=65 Identities=8% Similarity=0.015 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 151 YRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 151 ~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
...++..|...++.|++. ....+..++++......+++--..++...-..+..+|++++|+++-+
T Consensus 26 ~~ki~~~L~lA~kagklv------~G~~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v 90 (135)
T 2aif_A 26 NNKIINLVQQACNYKQLR------KGANEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFV 90 (135)
T ss_dssp HHHHHHHHHHHHHTTCEE------ESHHHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCcc------cCHHHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEE
Confidence 456778888889999865 24567778888776666666555555433366888999999998743
No 140
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=32.36 E-value=1e+02 Score=23.00 Aligned_cols=63 Identities=14% Similarity=0.118 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEE
Q 044053 152 RGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 152 ~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a 220 (327)
..+.+.|....+.|++. ....+..++++......+++--..++......+..+|+++||+++-
T Consensus 14 ~~i~~~L~lA~kagkl~------~G~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~ 76 (124)
T 2fc3_A 14 EKAYEAVKRARETGRIK------KGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVY 76 (124)
T ss_dssp HHHHHHHHHHHHHSEEE------ESHHHHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhCCcc------CCHHHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEE
Confidence 45566777777888754 2456777888877777677766666644346688899999998643
No 141
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=31.94 E-value=2.8e+02 Score=24.85 Aligned_cols=152 Identities=14% Similarity=0.050 Sum_probs=84.3
Q ss_pred ChHHHHHHHHHHHH-cCCCEEeCCCCcCC-HHH--HHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIK-LGYRHFDTAAMYGT-EKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 114 (327)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gi~~~DTA~~Ygs-E~~--lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~ 114 (327)
+.++..+....+++ .|++.|-.=-.-.. +.. .=+++++.+ .+++-|..... ...+.+...+ +-+.|+
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~-------g~~~~l~vDaN-~~~~~~~A~~-~~~~l~ 218 (382)
T 3dgb_A 148 DTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKAL-------GDSASVRVDVN-QAWDEAVALR-ACRILG 218 (382)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHH-------GGGSEEEEECT-TCBCHHHHHH-HHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHc-------CCCCeEEEeCC-CCCCHHHHHH-HHHHHh
Confidence 34444445566666 69998854221111 221 223455432 23445555542 2334443332 234555
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSI 193 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~ 193 (327)
.+++.+| ..|.+. +-++.+.++++.-.|. ..|=|.++...+.++++.... ++
T Consensus 219 ~~~i~~i-----EqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~--d~ 271 (382)
T 3dgb_A 219 GNGIDLI-----EQPISR--------------------NNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAA--SV 271 (382)
T ss_dssp TTTCCCE-----ECCBCT--------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCC--SE
T ss_pred hcCcCee-----eCCCCc--------------------cCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCC--CE
Confidence 5655444 444321 1246667777664444 556677888999999886544 36
Q ss_pred eecccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 194 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 194 ~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+|+...-+ ..-.++...|+++|+.++..+.+.+
T Consensus 272 v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 307 (382)
T 3dgb_A 272 FALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLEG 307 (382)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCCC
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCeEeecCCCcc
Confidence 66665433 2226788999999999987666643
No 142
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=31.82 E-value=1.9e+02 Score=24.79 Aligned_cols=69 Identities=14% Similarity=0.305 Sum_probs=45.7
Q ss_pred CCCEEeC-CCCcC--CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCC-----C---CChhhHHHHHHHHHHHh--CCCc
Q 044053 54 GYRHFDT-AAMYG--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQ-----N---AHRDHVIPALKKSLSAL--QMEY 120 (327)
Q Consensus 54 Gi~~~DT-A~~Yg--sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~-----~---~~~~~i~~~le~SL~rL--~~d~ 120 (327)
-++.+.- +..|+ +++.+.++.++ ..+++.-+.|++.. . ...+...+.+-++++-| + ++
T Consensus 49 ~F~tVEiNsTFY~~p~~~t~~~W~~~--------tP~~F~F~vKa~r~iTh~~~~~~~~~~~~~~~F~~~~~pL~~~-~k 119 (273)
T 1vpq_A 49 GFRIVELNFTYYTQPSWRSFVQMLRK--------TPPDFYFTVKTPGSVTHVLWKEGKDPKEDMENFTRQIEPLIEE-QR 119 (273)
T ss_dssp CCCEEEECCCSSSSSCHHHHHHHHTT--------SCTTCEEEEECCHHHHHTHHHHTCCSHHHHHHHHHHHHHHHHT-TC
T ss_pred CCCeEEECccccCCCCHHHHHHHHHh--------CCCCeEEEEEeChhhcccccccccchHHHHHHHHHHHHhhccC-CC
Confidence 4666654 55788 78888888764 46889999998531 1 11123334444567777 6 78
Q ss_pred eeEEEeecCCC
Q 044053 121 LDLYLVHLPIS 131 (327)
Q Consensus 121 iDl~~lH~p~~ 131 (327)
+..+++.-|..
T Consensus 120 LG~vL~Q~Pps 130 (273)
T 1vpq_A 120 LKMTLAQFPFS 130 (273)
T ss_dssp EEEEEEECCTT
T ss_pred EEEEEEEcCCC
Confidence 99999888743
No 143
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=31.78 E-value=3.1e+02 Score=25.25 Aligned_cols=67 Identities=12% Similarity=0.146 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecC
Q 044053 155 WEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 155 ~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~p 223 (327)
++.+.+++++-.|. ..|=+.++...+.++++.... +++|+...-+ ..-..+...|+++|+.++..+.
T Consensus 280 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 280 TEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLI--DYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp GGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred HHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCc--cceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 35567777665554 455567889999999886544 4777766543 2236789999999999977665
No 144
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=31.68 E-value=1e+02 Score=24.77 Aligned_cols=56 Identities=20% Similarity=0.311 Sum_probs=35.1
Q ss_pred HHHHHHc-CCccEEEecc-ccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEE
Q 044053 158 MEESQML-GLTKSIGLSN-FSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 158 l~~l~~~-Gkir~iGvS~-~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a 220 (327)
++++++. |+=..||+++ .++++++++.+. +.++ + .++.. ..++++.|++.|+.+++
T Consensus 52 i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~-Gad~--i---v~~~~-~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 52 IKELSFLKEKGAIIGAGTVTSVEQCRKAVES-GAEF--I---VSPHL-DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp HHHTHHHHHTTCEEEEESCCSHHHHHHHHHH-TCSE--E---ECSSC-CHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHCCCCcEEEecccCCHHHHHHHHHc-CCCE--E---EcCCC-CHHHHHHHHHcCCcEEC
Confidence 4444443 3224588844 788888887774 3333 3 22222 26799999999999986
No 145
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=31.35 E-value=2.6e+02 Score=24.20 Aligned_cols=95 Identities=17% Similarity=0.137 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCccEEEeccccHHHHHHH
Q 044053 105 VIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQML-GLTKSIGLSNFSCKKIETI 183 (327)
Q Consensus 105 i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~ 183 (327)
-+..+-+.|.++|+++|++-+ |.. ...-++.+..+.+. ..++..++.......++.+
T Consensus 28 ~K~~i~~~L~~~Gv~~IE~g~---p~~-------------------~~~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~a 85 (293)
T 3ewb_X 28 EKIQIALQLEKLGIDVIEAGF---PIS-------------------SPGDFECVKAIAKAIKHCSVTGLARCVEGDIDRA 85 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEEC---GGG-------------------CHHHHHHHHHHHHHCCSSEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeC---CCC-------------------CccHHHHHHHHHHhcCCCEEEEEecCCHHHHHHH
Confidence 444555668999999999863 321 12334555555544 4477777776556667777
Q ss_pred HHh---CCCCCeeeecccCcccc--------------cHHHHHHHHHcCCEEEEe
Q 044053 184 LTF---ATIPPSINQVEMHPVWQ--------------QRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 184 ~~~---~~~~~~~~q~~~~~~~~--------------~~~ll~~~~~~gi~v~a~ 221 (327)
++. ++.+.+.+-+..|.... -.+.+++|+++|+.|...
T Consensus 86 ~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~ 140 (293)
T 3ewb_X 86 EEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFS 140 (293)
T ss_dssp HHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEE
T ss_pred HHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 664 33332222222222211 146788899999887643
No 146
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=31.31 E-value=1.2e+02 Score=26.36 Aligned_cols=103 Identities=13% Similarity=0.041 Sum_probs=55.4
Q ss_pred CChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHH
Q 044053 100 AHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKK 179 (327)
Q Consensus 100 ~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~ 179 (327)
++.+. +..+-+.|.++|+++|.+-..-.|... | . ..+.++.+..+++...++..++. .+...
T Consensus 24 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p-------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~ 85 (298)
T 2cw6_A 24 VSTPV-KIKLIDMLSEAGLSVIETTSFVSPKWV-P-------------Q--MGDHTEVLKGIQKFPGINYPVLT-PNLKG 85 (298)
T ss_dssp CCHHH-HHHHHHHHHHTTCSEECCEECCCTTTC-G-------------G--GTTHHHHHHHSCCCTTCBCCEEC-CSHHH
T ss_pred CCHHH-HHHHHHHHHHcCcCEEEECCCcCcccc-c-------------c--cCCHHHHHHHHhhCCCCEEEEEc-CCHHh
Confidence 34444 446667788999999999764443110 0 0 11222333444433334444444 45677
Q ss_pred HHHHHHhCCCCCeeeecccCcccc--------------cHHHHHHHHHcCCEEEEe
Q 044053 180 IETILTFATIPPSINQVEMHPVWQ--------------QRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 180 l~~~~~~~~~~~~~~q~~~~~~~~--------------~~~ll~~~~~~gi~v~a~ 221 (327)
++.+++. +++.+.+-...+..+. -.+.+++|+++|+.+.++
T Consensus 86 i~~a~~a-g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 86 FEAAVAA-GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp HHHHHHT-TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHC-CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 7777764 4443222222232210 145789999999998754
No 147
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=30.94 E-value=2.6e+02 Score=24.12 Aligned_cols=104 Identities=11% Similarity=0.061 Sum_probs=63.8
Q ss_pred hhhHHHHHHHHHHHhCCCceeEEEee-cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHH
Q 044053 102 RDHVIPALKKSLSALQMEYLDLYLVH-LPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKI 180 (327)
Q Consensus 102 ~~~i~~~le~SL~rL~~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l 180 (327)
.+.+.+..++ +-.-|-|.||+---- +|... +.+. ......+...++.+++.+. -|.|-++.++.+
T Consensus 28 ~~~a~~~a~~-~v~~GAdiIDIGgestrpga~-------~v~~----~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va 93 (280)
T 1eye_A 28 LDDAVKHGLA-MAAAGAGIVDVGGESSRPGAT-------RVDP----AVETSRVIPVVKELAAQGI--TVSIDTMRADVA 93 (280)
T ss_dssp HHHHHHHHHH-HHHTTCSEEEEECC-------------------------HHHHHHHHHHHHHTTC--CEEEECSCHHHH
T ss_pred HHHHHHHHHH-HHHCCCCEEEECCccCCCCCC-------CCCH----HHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHH
Confidence 4444444433 333588999987311 12110 0000 1236677788888887742 478899999999
Q ss_pred HHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecC
Q 044053 181 ETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 181 ~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~p 223 (327)
+.+++.+ ...+|-+. -....+++++.++++|..++.+..
T Consensus 94 ~aAl~aG--a~iINdvs--g~~~d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 94 RAALQNG--AQMVNDVS--GGRADPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp HHHHHTT--CCEEEETT--TTSSCTTHHHHHHHHTCCEEEECC
T ss_pred HHHHHcC--CCEEEECC--CCCCCHHHHHHHHHhCCeEEEEcC
Confidence 9999974 23455433 332346899999999999999864
No 148
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=30.90 E-value=1.8e+02 Score=24.51 Aligned_cols=146 Identities=11% Similarity=0.047 Sum_probs=75.6
Q ss_pred HHHHHHHHcCCccEEEecccc-------------HHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEec
Q 044053 156 EAMEESQMLGLTKSIGLSNFS-------------CKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 156 ~~l~~l~~~Gkir~iGvS~~~-------------~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~ 222 (327)
-++-.++++|. .-+|+.+.. .+.++...+..+++..++.++-..-....++....++.||..++++
T Consensus 19 ~al~~l~~~G~-eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~l~~~~i~~vv~G 97 (237)
T 3rjz_A 19 YALYWAIKNRF-SVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVEDLKRVLSGLKIQGIVAG 97 (237)
T ss_dssp HHHHHHHHTTC-EEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHHHHHHHHTTSCCSEEECC
T ss_pred HHHHHHHHcCC-eEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHHhcCCcEEEEC
Confidence 34456788884 334443211 1234444555566654443332110111557777777788888766
Q ss_pred CCCCCCccCCCCcccChHHHHHHHHHcCC---------CHHHHHHHHHHhcC-CEEeecCCCHHHHHHhhcccccccCHH
Q 044053 223 PLGAVGKIYGSNQVLENEALKEIAKAHGK---------TVAQVSLRWIVEQG-ATVVVKSLNLERMKQNLGIFDWKLTDD 292 (327)
Q Consensus 223 pl~~~G~l~~~~~~~~~~~l~~ia~~~~~---------s~aq~al~w~l~~~-~~vi~g~~~~~~l~enl~a~~~~L~~~ 292 (327)
.+.. ......+..+|.+.|. ++.+ .++-.++.| .++|++..+. .|.+ .-+...|+.+
T Consensus 98 di~s---------~yqr~r~e~vc~~~gl~~~~PLW~~d~~~-Ll~e~i~~G~~aiiv~v~~~-gL~~--~~lG~~l~~~ 164 (237)
T 3rjz_A 98 ALAS---------KYQRKRIEKVAKELGLEVYTPAWGRDAKE-YMRELLNLGFKIMVVGVSAY-GLDE--SWLGRILDES 164 (237)
T ss_dssp ---C---------CSHHHHHHHHHHHTTCEEECSSSSCCHHH-HHHHHHHTTCEEEEEEEEST-TCCG--GGTTCBCCHH
T ss_pred Ccch---------HHHHHHHHHHHHHcCCEEEccccCCCHHH-HHHHHHHCCCEEEEEEEecC-CCCh--HHCCCccCHH
Confidence 5543 1234678888988763 5555 455556778 4555555432 2322 2345578887
Q ss_pred HHHHHhcC---------CCCCccCCccccCCC
Q 044053 293 DYDKINQI---------PQHRLIPSDFWVSPQ 315 (327)
Q Consensus 293 ~~~~l~~~---------~~~~~~~~~~~~~~~ 315 (327)
.++.|.++ -++..+....+.+|.
T Consensus 165 ~~~~L~~l~~~~gvd~cGEgGEfhT~V~d~Pl 196 (237)
T 3rjz_A 165 ALEELITLNEKYKVHVAGEGGEFETFVLDMPL 196 (237)
T ss_dssp HHHHHHHHHHHHCCCTTCTTTTEEEEEEECTT
T ss_pred HHHHHHHHHhhcCccccCCCceeEEEEEecCc
Confidence 77777653 223334444566665
No 149
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=30.20 E-value=2.4e+02 Score=24.09 Aligned_cols=94 Identities=14% Similarity=0.086 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHcCC-ccEEE------------ecccc-------------HHHHHHHHHhCCCCCeeeecccCcc
Q 044053 148 PMDYRGVWEAMEESQMLGL-TKSIG------------LSNFS-------------CKKIETILTFATIPPSINQVEMHPV 201 (327)
Q Consensus 148 ~~~~~~~~~~l~~l~~~Gk-ir~iG------------vS~~~-------------~~~l~~~~~~~~~~~~~~q~~~~~~ 201 (327)
+.+.+.+.+.++.|.+.|- +-.+| +-+-+ .+.++++-+...--|.+.+..||+.
T Consensus 28 dP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv 107 (267)
T 3vnd_A 28 DPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLV 107 (267)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHH
Q ss_pred ccc--HHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcCC
Q 044053 202 WQQ--RKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHGK 251 (327)
Q Consensus 202 ~~~--~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~ 251 (327)
.+- ...++.|++.|+.-+...-+.. .....+.+.++++|+
T Consensus 108 ~~~g~e~f~~~~~~aGvdgvii~Dlp~----------ee~~~~~~~~~~~gl 149 (267)
T 3vnd_A 108 FANGIDEFYTKAQAAGVDSVLIADVPV----------EESAPFSKAAKAHGI 149 (267)
T ss_dssp HHHCHHHHHHHHHHHTCCEEEETTSCG----------GGCHHHHHHHHHTTC
T ss_pred HHhhHHHHHHHHHHcCCCEEEeCCCCH----------hhHHHHHHHHHHcCC
No 150
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=30.10 E-value=1.7e+02 Score=24.54 Aligned_cols=30 Identities=7% Similarity=0.143 Sum_probs=22.8
Q ss_pred HHHHHHcCCccEEEeccccHHHHHHHHHhC
Q 044053 158 MEESQMLGLTKSIGLSNFSCKKIETILTFA 187 (327)
Q Consensus 158 l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~ 187 (327)
++.+++.|....+=+++|+...+..+.+..
T Consensus 123 ~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~ 152 (250)
T 3ks6_A 123 IAGLERHSMLERTTFSSFLLASMDELWKAT 152 (250)
T ss_dssp HHHHHHTTCGGGEEEEESCHHHHHHHHHHC
T ss_pred HHHHHhcCCCCCEEEEeCCHHHHHHHHHHC
Confidence 444556677788889999999988887654
No 151
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=30.09 E-value=25 Score=33.22 Aligned_cols=22 Identities=9% Similarity=-0.032 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHcCCCEEeCCC
Q 044053 41 DALKLAVLEAIKLGYRHFDTAA 62 (327)
Q Consensus 41 ~~~~~~l~~A~~~Gi~~~DTA~ 62 (327)
.....+++.|++.|++|||||.
T Consensus 94 ~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 94 ISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SCHHHHHHHHHHHTCEEEESSC
T ss_pred ccCHHHHHHHHHcCCCEEECCC
Confidence 3467889999999999999993
No 152
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=29.54 E-value=2.9e+02 Score=24.33 Aligned_cols=50 Identities=6% Similarity=0.111 Sum_probs=29.6
Q ss_pred ccHHHHHHHHHhCCCCCeeeecccCccc---c---cHHHHHHHHHcCCEEEEecCCC
Q 044053 175 FSCKKIETILTFATIPPSINQVEMHPVW---Q---QRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 175 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~---~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
.+.+.++++++. +.+.+++..+.|+.- . -+++.++|+++|+-++.=...+
T Consensus 162 ~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 217 (422)
T 3fvs_A 162 LDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQ 217 (422)
T ss_dssp CCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccch
Confidence 456666655432 223333333444431 1 2678999999999998766654
No 153
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=29.53 E-value=24 Score=18.91 Aligned_cols=18 Identities=33% Similarity=0.543 Sum_probs=9.9
Q ss_pred EEeccccHHHHHHHHHhC
Q 044053 170 IGLSNFSCKKIETILTFA 187 (327)
Q Consensus 170 iGvS~~~~~~l~~~~~~~ 187 (327)
-||..|+..+++++++.+
T Consensus 4 sgvtrfdekqieelldnc 21 (31)
T 4h62_V 4 SGVTRFDEKQIEELLDNC 21 (31)
T ss_dssp ------CHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHH
Confidence 478888989999888764
No 154
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=29.37 E-value=3.2e+02 Score=24.76 Aligned_cols=151 Identities=16% Similarity=0.192 Sum_probs=88.5
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT---EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs---E~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+..+.+.+.|++.|=.....+. .+.+ +++++.+ | +++-|..-.. ...+.+...+- +++
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v-~~vR~~~--g-----~~~~l~vDaN-~~~~~~~A~~~----~~~ 254 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEM-EILRERL--G-----PAVRIACDMH-WAHTASEAVAL----IKA 254 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHH-HHHHHHH--C-----SSSEEEEECC-SCCCHHHHHHH----HHH
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHH-HHHHhcc--C-----CeEEEEeccc-cCCCHHHHHHH----HHh
Confidence 4566667778888999998854332222 2233 3455432 2 3334433322 22344443322 233
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
| +-.+++++-.|.+.+ -++.+.+++++-.|. ..|=|.++...+.++++...+ +++
T Consensus 255 l--~~~~l~~iEqP~~~~--------------------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--div 310 (412)
T 4h1z_A 255 M--EPHGLWFAEAPVRTE--------------------DIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRAL--AIV 310 (412)
T ss_dssp H--GGGCEEEEECCSCTT--------------------CHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCC--SEE
T ss_pred h--cccccceecCCCCcc--------------------chHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCC--CEE
Confidence 3 235677888774321 136677777765543 456677889999988876544 467
Q ss_pred ecccCc--ccccHHHHHHHHHcCCEEEEecCCCC
Q 044053 195 QVEMHP--VWQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 195 q~~~~~--~~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
|....- +..-.++...|+.+|+.++..++++.
T Consensus 311 ~~d~~~GGit~~~kia~~A~~~gi~v~~h~~~~~ 344 (412)
T 4h1z_A 311 QPEMGHKGITQFMRIGAYAHVHHIKVIPHATIGA 344 (412)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCEECCCCCSSC
T ss_pred EecCCCCChHHHHHHHHHHHHCCCcEEecCCcch
Confidence 665321 11125688899999999998877764
No 155
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=29.34 E-value=2.9e+02 Score=24.18 Aligned_cols=154 Identities=12% Similarity=-0.011 Sum_probs=84.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC-HHHH--HHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT-EKAL--GEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs-E~~l--G~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+.++.+++.|++.|-.--.-.. +.-+ =+++++. -.+++-|..-. +...+++...+-+ +.|+.
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~-------~g~~~~L~vDa-N~~~~~~~A~~~~-~~l~~ 186 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAA-------LPPGAKLRLDA-NGSWDRATANRWF-AWLDR 186 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHH-------SCTTCEEEEEC-TTCCCHHHHHHHH-HHHHH
T ss_pred ChHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHH-------cCCCCEEEEcc-cCCCCHHHHHHHH-HHHHh
Confidence 3455666777788889988753221111 2112 1344443 12233333332 2234555554444 33555
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
+. -.++.++-.|.+.+ -++.+.++.+.-.|. ..|=|.++...+.++++.... .++
T Consensus 187 ~~--~~~i~~iEqP~~~~--------------------d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~--~~i 242 (332)
T 2ozt_A 187 HG--NGKIEYVEQPLPPD--------------------QWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWP--GFF 242 (332)
T ss_dssp HC--CTTEEEEECCSCTT--------------------CHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCC--SEE
T ss_pred hc--cCCcceeECCCCCC--------------------CHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCC--CEE
Confidence 52 12677888774321 145566666554433 556667788888888876433 355
Q ss_pred ecccCcccccHHHHHHHHHc--CCEEEEecCCC
Q 044053 195 QVEMHPVWQQRKLIEFCKAK--GIIVTAYSPLG 225 (327)
Q Consensus 195 q~~~~~~~~~~~ll~~~~~~--gi~v~a~~pl~ 225 (327)
|+..+..---.++...|+++ |+.++..+.+.
T Consensus 243 ~ik~~~~GGi~~i~~~A~~~~~gi~~~~~~~~e 275 (332)
T 2ozt_A 243 VIKTALFGDPDSLSLLLRRGLEPQRLVFSSALE 275 (332)
T ss_dssp EECHHHHSCHHHHHHHHHTTCCGGGEEEBCCSC
T ss_pred EEChhhhCCHHHHHHHHHHhCCCCcEEEeCCcc
Confidence 55543321114788999999 99998876654
No 156
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=29.31 E-value=1.8e+02 Score=21.79 Aligned_cols=62 Identities=5% Similarity=-0.060 Sum_probs=42.4
Q ss_pred HHHHHHHHHHc----CCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 154 VWEAMEESQML----GLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 154 ~~~~l~~l~~~----Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
+-.+|.++.+. |++. . ...+..++++......+++--..++......+..+|+++||+++-+
T Consensus 8 i~~~l~~~L~~A~~~gkl~-~-----G~~~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v 73 (126)
T 2xzm_U 8 LNEVLAKVIKSSNCQDAIS-K-----GLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSV 73 (126)
T ss_dssp HHHHHHHHHTTTTSSSCEE-E-----SHHHHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCEe-e-----cHHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEE
Confidence 34455555444 7754 2 3567777888777777777666665444467889999999999854
No 157
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=29.22 E-value=1.9e+02 Score=24.67 Aligned_cols=92 Identities=10% Similarity=0.041 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHHHcC-CccEEEecccc---------------------HHHHHHHHHhCC-CCCeeeecccCccccc--
Q 044053 150 DYRGVWEAMEESQMLG-LTKSIGLSNFS---------------------CKKIETILTFAT-IPPSINQVEMHPVWQQ-- 204 (327)
Q Consensus 150 ~~~~~~~~l~~l~~~G-kir~iGvS~~~---------------------~~~l~~~~~~~~-~~~~~~q~~~~~~~~~-- 204 (327)
+.+..++.+..|.+.| -+-.+|+-.-+ ...+-++++..+ .-|.+.+..||+..+.
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~ 105 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGL 105 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhH
Confidence 4788889999999998 48889976432 122222233222 1367888899988764
Q ss_pred HHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcCC
Q 044053 205 RKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHGK 251 (327)
Q Consensus 205 ~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~ 251 (327)
+..++.|++.|+.=+.- .+-+....+.+.+.++++|+
T Consensus 106 e~F~~~~~~aGvdG~Ii----------pDLP~eE~~~~~~~~~~~Gl 142 (252)
T 3tha_A 106 EKFVKKAKSLGICALIV----------PELSFEESDDLIKECERYNI 142 (252)
T ss_dssp HHHHHHHHHTTEEEEEC----------TTCCGGGCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHHHcCC
Confidence 66888888888743321 11112234567777777763
No 158
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=29.21 E-value=1.1e+02 Score=22.68 Aligned_cols=63 Identities=11% Similarity=0.061 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEE
Q 044053 151 YRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVT 219 (327)
Q Consensus 151 ~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~ 219 (327)
...+.+.|....+.|++. ....+..++++......+++--..++......+..+|+++||+++
T Consensus 12 ~~~i~~~L~lA~kag~l~------~G~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~ 74 (119)
T 1rlg_A 12 QNEALSLLEKVRESGKVK------KGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYI 74 (119)
T ss_dssp HHHHHHHHHHHHHHSEEE------ESHHHHHHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHhCCee------ECHHHHHHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEE
Confidence 345667777778888754 245677778887776666666666664434678889999999864
No 159
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=29.18 E-value=1.3e+02 Score=22.30 Aligned_cols=17 Identities=24% Similarity=0.255 Sum_probs=15.1
Q ss_pred cHHHHHHHHHcCCEEEE
Q 044053 204 QRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 204 ~~~ll~~~~~~gi~v~a 220 (327)
++++.+.|+++||.++.
T Consensus 94 ~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 94 NEELEEILSENGIEPVI 110 (122)
T ss_dssp CHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHcCCeEEC
Confidence 57899999999999985
No 160
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=28.82 E-value=1.6e+02 Score=21.07 Aligned_cols=64 Identities=8% Similarity=0.051 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 151 YRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 151 ~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
.+.+...|....+.|++. ....+..++++......+++--..++. ....+..+|..++|+++.|
T Consensus 7 ~~~i~~~L~la~kagklv------~G~~~v~kai~~gkaklViiA~D~~~~-~~~~i~~~c~~~~ip~~~~ 70 (104)
T 4a18_G 7 QDNIQSKLALVMRSGKAT------LGYKSTIKAIRNGTAKLVFISNNCPTV-RKSEIEYYASLAQISIHHF 70 (104)
T ss_dssp -CHHHHHHHHHHHHSEEE------ESHHHHHHHHHHTCCCEEEECTTSCHH-HHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHhCCEe------ECHHHHHHHHHcCCceEEEEeCCCCHH-HHHHHHHHHHHcCCcEEEe
Confidence 346778888888888754 335677788887777666665555543 2366788899999999864
No 161
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=28.75 E-value=1.8e+02 Score=23.95 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=50.2
Q ss_pred HHHHHHHHHcCCccEEEeccc----------------c---HHHHHHHHHhCCCCCeeeecccCccccc-HHHHHHHHHc
Q 044053 155 WEAMEESQMLGLTKSIGLSNF----------------S---CKKIETILTFATIPPSINQVEMHPVWQQ-RKLIEFCKAK 214 (327)
Q Consensus 155 ~~~l~~l~~~Gkir~iGvS~~----------------~---~~~l~~~~~~~~~~~~~~q~~~~~~~~~-~~ll~~~~~~ 214 (327)
-++++.+++.| +..|-+... + ...+.++++..++.+......++..... ...++.|++.
T Consensus 25 ~~~l~~~~~~G-~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~l 103 (262)
T 3p6l_A 25 TEALDKTQELG-LKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAM 103 (262)
T ss_dssp HHHHHHHHHTT-CCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHcC-CCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHc
Confidence 35666777777 566666532 2 3456666676776655555444432222 6788888888
Q ss_pred CCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcCC
Q 044053 215 GIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHGK 251 (327)
Q Consensus 215 gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~ 251 (327)
|...+...|-. . .-..+.++|+++|+
T Consensus 104 Ga~~v~~~~~~---------~--~~~~l~~~a~~~gv 129 (262)
T 3p6l_A 104 DLEFITCEPAL---------S--DWDLVEKLSKQYNI 129 (262)
T ss_dssp TCSEEEECCCG---------G--GHHHHHHHHHHHTC
T ss_pred CCCEEEecCCH---------H--HHHHHHHHHHHhCC
Confidence 88887765421 1 12456666666554
No 162
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=28.38 E-value=2.7e+02 Score=25.10 Aligned_cols=21 Identities=10% Similarity=0.260 Sum_probs=16.6
Q ss_pred HHHHHHHHHcCCEEEEecCCC
Q 044053 205 RKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 205 ~~ll~~~~~~gi~v~a~~pl~ 225 (327)
.++.+.|+++|+-++.=.+.+
T Consensus 224 ~~i~~l~~~~~~~li~De~~~ 244 (447)
T 3b46_A 224 TTLGNICVKHNVVIISDEVYE 244 (447)
T ss_dssp HHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHHHcCcEEEEeccch
Confidence 678999999999998755543
No 163
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=28.36 E-value=3.3e+02 Score=24.59 Aligned_cols=144 Identities=13% Similarity=0.128 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHHHc-CCCEEeCCCCcCCHH--HHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHh
Q 044053 40 TDALKLAVLEAIKL-GYRHFDTAAMYGTEK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 116 (327)
Q Consensus 40 ~~~~~~~l~~A~~~-Gi~~~DTA~~YgsE~--~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL 116 (327)
.++..+.++.+++. |++.|=.=-...-+. ..=+++++. - +++-|..... ...+.+...+ +-+.|+.+
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~-------~-~~~~l~vDaN-~~w~~~~A~~-~~~~l~~~ 238 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREA-------L-PGVNLRVDPN-AAWSVPDSVR-AGIALEEL 238 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSCHHHHHHHHHHHHHH-------C-TTSEEEEECT-TCSCHHHHHH-HHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHh-------C-CCCeEEeeCC-CCCCHHHHHH-HHHHHhhc
Confidence 36677778888898 999885432222111 122355554 3 4555555542 2344444333 23455666
Q ss_pred CCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeee
Q 044053 117 QMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQ 195 (327)
Q Consensus 117 ~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q 195 (327)
++++| ..| +. -++.+.+++++-.|. ..|=|.++...+.++++.... +++|
T Consensus 239 ~i~~i-----EqP-------------------~~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~ 289 (398)
T 4dye_A 239 DLEYL-----EDP-------------------CV---GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAV--DVIH 289 (398)
T ss_dssp CCSEE-----ECC-------------------SS---HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCC--SEEE
T ss_pred CCCEE-----cCC-------------------CC---CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCC--CEEE
Confidence 55444 444 12 357777777765443 445566788888888886544 4777
Q ss_pred cccCcc---cccHHHHHHHHHcCCEEEEec
Q 044053 196 VEMHPV---WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 196 ~~~~~~---~~~~~ll~~~~~~gi~v~a~~ 222 (327)
+...-+ ..-.++...|+++|+.++..+
T Consensus 290 ~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 319 (398)
T 4dye_A 290 GDVYKWGGIAATKALAAHCETFGLGMNLHS 319 (398)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred eCccccCCHHHHHHHHHHHHHcCCeEEEcC
Confidence 665443 222678999999999999876
No 164
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=28.32 E-value=98 Score=25.83 Aligned_cols=66 Identities=11% Similarity=0.210 Sum_probs=41.1
Q ss_pred HHHHHHHcCCccEEEeccccHHHHHHHHHhCC-CCCeeee----------cccCccc-------ccHHHHHHHHHcCCEE
Q 044053 157 AMEESQMLGLTKSIGLSNFSCKKIETILTFAT-IPPSINQ----------VEMHPVW-------QQRKLIEFCKAKGIIV 218 (327)
Q Consensus 157 ~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~-~~~~~~q----------~~~~~~~-------~~~~ll~~~~~~gi~v 218 (327)
.++.+++.|.-..+=+++|+...+.++.+... ++....- ..+..+. ...++++.|+++|+.|
T Consensus 120 v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~v 199 (238)
T 3no3_A 120 SVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTS 199 (238)
T ss_dssp HHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTCEE
T ss_pred HHHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHCCCEE
Confidence 34455667877889999999999888877643 2211110 0011010 1245788889999999
Q ss_pred EEec
Q 044053 219 TAYS 222 (327)
Q Consensus 219 ~a~~ 222 (327)
.+|.
T Consensus 200 ~~WT 203 (238)
T 3no3_A 200 NVWT 203 (238)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8884
No 165
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=27.63 E-value=3.6e+02 Score=24.72 Aligned_cols=149 Identities=11% Similarity=0.106 Sum_probs=89.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCC------CcC---CHH------HHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChh
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAA------MYG---TEK------ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRD 103 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~------~Yg---sE~------~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~ 103 (327)
+.++..+..+.+++.|++.|-.-. .+| .+. .+=+++++.+ -+++-|..... ...+.+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~av-------G~d~~L~vDan-~~~t~~ 217 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAV-------GDKADLLFGTH-GQFTTA 217 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH-------TTSSEEEECCC-SCBCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHh-------CCCCeEEEeCC-CCCCHH
Confidence 567788888999999999987521 123 111 1123444431 23455665653 233444
Q ss_pred hHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHH
Q 044053 104 HVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIET 182 (327)
Q Consensus 104 ~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~ 182 (327)
...+ +-+.|+.+++++| ..|.+. +-++.+.++++.-.|- ..|=+-++...+++
T Consensus 218 ~A~~-~~~~Le~~~i~~i-----EeP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 271 (433)
T 3rcy_A 218 GAIR-LGQAIEPYSPLWY-----EEPVPP--------------------DNVGAMAQVARAVRIPVATGERLTTKAEFAP 271 (433)
T ss_dssp HHHH-HHHHHGGGCCSEE-----ECCSCT--------------------TCHHHHHHHHHHSSSCEEECTTCCSHHHHHH
T ss_pred HHHH-HHHHhhhcCCCEE-----ECCCCh--------------------hhHHHHHHHHhccCCCEEecCCCCCHHHHHH
Confidence 4333 2345666665544 455321 1246677777765554 44556678999999
Q ss_pred HHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEecC
Q 044053 183 ILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 183 ~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~p 223 (327)
+++...+ +++|+..+-+ ..-..+...|+.+|+.+...++
T Consensus 272 ~l~~g~~--D~v~~d~~~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 272 VLREGAA--AILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHHTTCC--SEECCCHHHHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred HHHcCCC--CEEEeCchhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 9986544 4676665443 2226789999999999987763
No 166
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=27.42 E-value=3.3e+02 Score=24.23 Aligned_cols=34 Identities=12% Similarity=0.008 Sum_probs=21.4
Q ss_pred HHHHHHHcCCccEEEeccc-cHHHHHHHHHhCCCC
Q 044053 157 AMEESQMLGLTKSIGLSNF-SCKKIETILTFATIP 190 (327)
Q Consensus 157 ~l~~l~~~Gkir~iGvS~~-~~~~l~~~~~~~~~~ 190 (327)
.+..+++.=++--|++..+ +++.++++++....+
T Consensus 286 ~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD 320 (363)
T 3l5l_A 286 IAERVRREAKLPVTSAWGFGTPQLAEAALQANQLD 320 (363)
T ss_dssp HHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCS
T ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCcc
Confidence 3444444445667777775 588888888765443
No 167
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=26.86 E-value=2.4e+02 Score=26.49 Aligned_cols=143 Identities=15% Similarity=0.030 Sum_probs=77.5
Q ss_pred cCCHHHHHHHHHHHHhcCCCCC-CCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCC
Q 044053 64 YGTEKALGEAIAEALRLGLVSS-REQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVP 142 (327)
Q Consensus 64 YgsE~~lG~~L~~~~~~g~~~~-R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~ 142 (327)
||.++.|-++|++..+.- + .+-++|.|-.-..-. -+.+..-+++.-++++ ++++.+|.|.....
T Consensus 125 fGg~~kL~~~I~~~~~~~---~~P~~I~V~tTC~~e~I-GdDl~~v~~~~~~~~~---~pVi~v~tpgf~g~-------- 189 (492)
T 3u7q_A 125 FGGDKKLAKLIDEVETLF---PLNKGISVQSECPIGLI-GDDIESVSKVKGAELS---KTIVPVRCEGFRGV-------- 189 (492)
T ss_dssp HCSHHHHHHHHHHHHHHC---TTCCCEEEEECTHHHHT-TCCHHHHHHHHHHHHT---CCEEEECCCTTSSS--------
T ss_pred CCcHHHHHHHHHHHHHhC---CCCCEEEEECCcHHHHH-hcCHHHHHHHHHHhhC---CcEEEecCCCCCCC--------
Confidence 356666667777665432 4 566788887632111 1334444444444455 57899998865420
Q ss_pred CCCCCCCCHHHHHHHHHH-HHHc-----------CCccEEEeccc--cHHHHHHHHHhCCCCCeeeecc-----------
Q 044053 143 KEDLLPMDYRGVWEAMEE-SQML-----------GLTKSIGLSNF--SCKKIETILTFATIPPSINQVE----------- 197 (327)
Q Consensus 143 ~~~~~~~~~~~~~~~l~~-l~~~-----------Gkir~iGvS~~--~~~~l~~~~~~~~~~~~~~q~~----------- 197 (327)
......+.++++|-+ +.+. ++|.-||-.|+ +.+++.++++..++.+.+. +.
T Consensus 190 ---s~~~G~~~a~~al~~~l~~~~~~~~~~~~~~~~VNIiG~~~~~gD~~eik~lL~~~Gi~v~~~-~~g~~t~~ei~~~ 265 (492)
T 3u7q_A 190 ---SQSLGHHIANDAVRDWVLGKRDEDTTFASTPYDVAIIGDYNIGGDAWSSRILLEEMGLRCVAQ-WSGDGSISEIELT 265 (492)
T ss_dssp ---SHHHHHHHHHHHHHHHTTTTTTTCCCCCCCTTEEEEEEECCBTTTTHHHHHHHHHTTCEEEEE-EETTCCHHHHHHG
T ss_pred ---chhHHHHHHHHHHHHHHhhhcccccccCCCCCcEEEECCCCChhhHHHHHHHHHHCCCeEEEE-eCCCCCHHHHHhh
Confidence 000113334444443 4322 45777886554 3678999999887654322 11
Q ss_pred ----cCccccc---HHHHHHH-HHcCCEEEEecCCC
Q 044053 198 ----MHPVWQQ---RKLIEFC-KAKGIIVTAYSPLG 225 (327)
Q Consensus 198 ----~~~~~~~---~~ll~~~-~~~gi~v~a~~pl~ 225 (327)
+|+.... .....+. ++.|+.++...|+|
T Consensus 266 ~~A~~niv~~~~~~~~~A~~Le~~~GiP~i~~~p~G 301 (492)
T 3u7q_A 266 PKVKLNLVHCYRSMNYISRHMEEKYGIPWMEYNFFG 301 (492)
T ss_dssp GGCSEEEESCHHHHHHHHHHHHHHHCCCEEECCCSS
T ss_pred hcCcEEEEEChHHHHHHHHHHHHHhCCceEecCccC
Confidence 2222211 1233333 46699999988764
No 168
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=26.71 E-value=2.7e+02 Score=24.69 Aligned_cols=120 Identities=11% Similarity=0.002 Sum_probs=62.8
Q ss_pred CCCHHHHHHHHHHHHHcCCccEEEecc-------ccHHHHHHHHHhCC-CCCeeeecccCcccccHHHHHHHHHcCCEEE
Q 044053 148 PMDYRGVWEAMEESQMLGLTKSIGLSN-------FSCKKIETILTFAT-IPPSINQVEMHPVWQQRKLIEFCKAKGIIVT 219 (327)
Q Consensus 148 ~~~~~~~~~~l~~l~~~Gkir~iGvS~-------~~~~~l~~~~~~~~-~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~ 219 (327)
..+.+++.+.++++++.| ++.|-++. ...+.+.++++... ..+.+. .++-....+.++..++.|+..+
T Consensus 98 ~~s~eei~~~~~~~~~~g-~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~---~t~G~l~~e~l~~L~~aGvd~v 173 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAG-STRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEAC---MTLGTLSESQAQRLANAGLDYY 173 (369)
T ss_dssp CCCHHHHHHHHHHHHHTT-CSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEE---EECSSCCHHHHHHHHHHCCCEE
T ss_pred cCCHHHHHHHHHHHHHcC-CcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEE---EecCCCCHHHHHHHHHCCCCEE
Confidence 356899999999998887 44443321 23455555554321 122222 2232334678888888888766
Q ss_pred EecCCCCCCccCCCCcccChHHHHHHHHHcCCCHHHHHHHHHHhcC----CEEeecC-CCHHHHHHhhc
Q 044053 220 AYSPLGAVGKIYGSNQVLENEALKEIAKAHGKTVAQVSLRWIVEQG----ATVVVKS-LNLERMKQNLG 283 (327)
Q Consensus 220 a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~~~----~~vi~g~-~~~~~l~enl~ 283 (327)
..+.=+ ..+.+..+...+.....--+++.+...| +.+|+|. .+.+++.+.+.
T Consensus 174 ~i~les------------~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~~~l~ 230 (369)
T 1r30_A 174 NHNLDT------------SPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLL 230 (369)
T ss_dssp ECCCBS------------CHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHH
T ss_pred eecCcC------------CHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHHHHHH
Confidence 543221 1233334332221122223445554444 4567876 46677666554
No 169
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=26.70 E-value=1.3e+02 Score=21.60 Aligned_cols=64 Identities=9% Similarity=-0.002 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 151 YRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 151 ~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
.+.++..|....+.|++. ....+..+.++......+++--..++. ....+..+|..++|+++.|
T Consensus 7 ~~~i~~~L~la~kagk~v------~G~~~v~kai~~gkaklVilA~D~~~~-~~~~i~~~c~~~~ip~~~~ 70 (105)
T 3u5e_c 7 QESINQKLALVIKSGKYT------LGYKSTVKSLRQGKSKLIIIAANTPVL-RKSELEYYAMLSKTKVYYF 70 (105)
T ss_dssp --CHHHHHHHHHTTSEEE------ESHHHHHHHHHTTCCSEEEECTTSCHH-HHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHhCCee------ECHHHHHHHHHcCCceEEEEeCCCCHH-HHHHHHHHHHHcCCCEEEe
Confidence 345778888888888854 335677788887776666665555432 2367888999999999865
No 170
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=26.57 E-value=3.6e+02 Score=24.44 Aligned_cols=148 Identities=16% Similarity=0.161 Sum_probs=87.9
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCC--CcC-------CHH----H--HHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChh
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAA--MYG-------TEK----A--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRD 103 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~--~Yg-------sE~----~--lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~ 103 (327)
+.++..+..+.+++.|++.|-.-. .|+ +.. . .=+++++. --+++-|..... ...+.+
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a-------~G~d~~l~vDaN-~~~~~~ 215 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREA-------VGSKADLLFGTH-GQMVPS 215 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHH-------HTTSSEEEECCC-SCBCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHH-------hCCCCeEEEECC-CCCCHH
Confidence 567777888888999999987632 111 111 1 11344443 123455555643 233444
Q ss_pred hHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHH
Q 044053 104 HVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIET 182 (327)
Q Consensus 104 ~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~ 182 (327)
...+ +-+.|+.+++++| ..|.+. +-++.+.++++.-.|- ..|=+.++...+++
T Consensus 216 ~A~~-~~~~L~~~~i~~i-----EeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 269 (412)
T 4e4u_A 216 SAIR-LAKRLEKYDPLWF-----EEPVPP--------------------GQEEAIAQVAKHTSIPIATGERLTTKYEFHK 269 (412)
T ss_dssp HHHH-HHHHHGGGCCSEE-----ECCSCS--------------------SCHHHHHHHHHTCSSCEEECTTCCHHHHHHH
T ss_pred HHHH-HHHHhhhcCCcEE-----ECCCCh--------------------hhHHHHHHHHhhCCCCEEecCccCCHHHHHH
Confidence 4333 2345666665544 445321 1246677888776555 34445677888999
Q ss_pred HHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEec
Q 044053 183 ILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 183 ~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~ 222 (327)
+++.... +++|+...-. ..-..+...|+++|+.+..++
T Consensus 270 ~i~~~a~--d~v~~d~~~~GGit~~~kia~~A~~~gi~v~~h~ 310 (412)
T 4e4u_A 270 LLQAGGA--SILQLNVARVGGLLEAKKIATLAEVHYAQIAPHL 310 (412)
T ss_dssp HHHTTCC--SEECCCTTTTTSHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHcCCC--CEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 9886544 4777766554 223678999999999987654
No 171
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=26.50 E-value=1.7e+02 Score=26.51 Aligned_cols=69 Identities=7% Similarity=0.093 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeeeecccCc--ccccHHHHHHHHHcCCEEEEecCCCC
Q 044053 156 EAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSINQVEMHP--VWQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 156 ~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~--~~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+.+.++++.-.|. +.|=|.++...+.++++...+ +++|+...- +..-.++...|+++|+.++..+.+.+
T Consensus 260 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~i~~k~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 331 (393)
T 3u9i_A 260 EGLRRLTATRRVPVAADESVASATDAARLARNAAV--DVLNIKLMKCGIVEALDIAAIARTAGLHLMIGGMVES 331 (393)
T ss_dssp THHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCC--SEEEECHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCC--CEEEecccccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 5566666654443 566777888888888876543 466666544 11126688999999999988776643
No 172
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=26.27 E-value=3.5e+02 Score=24.06 Aligned_cols=153 Identities=15% Similarity=0.133 Sum_probs=89.1
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+.++.+++.|++.|-.=-.-. .+...=+++++.+ +.-++.|=.. ...+.+... +-+++
T Consensus 143 ~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~------~~~~l~vDaN---~~~~~~~A~----~~~~~ 209 (365)
T 3ik4_A 143 DEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAA------PTAPLIVDGN---CGYDVERAL----AFCAA 209 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHS------SSCCEEEECT---TCCCHHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhC------CCCeEEEECC---CCCCHHHHH----HHHHH
Confidence 567777778888999999875322111 1111223455431 2123333322 233444332 23444
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
|..+-.++.++..|.+. +-++.+.+++++-.|. ..|=|.++...+.++++.... +++
T Consensus 210 L~~~~~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~--d~v 267 (365)
T 3ik4_A 210 CKAESIPMVLFEQPLPR--------------------EDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTA--SVI 267 (365)
T ss_dssp HHHTTCCEEEEECCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCC--SEE
T ss_pred HhhCCCCceEEECCCCc--------------------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCC--CEE
Confidence 41133578888877432 1246667777665554 556677889999998876644 467
Q ss_pred ecccCc--ccccHHHHHHHHHcCCEEEEecCCCC
Q 044053 195 QVEMHP--VWQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 195 q~~~~~--~~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
|+...- +..-.++...|+++|+.++..+.+.+
T Consensus 268 ~ik~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 301 (365)
T 3ik4_A 268 NIKLMKAGVAEGLKMIAIAQAAGLGLMIGGMVES 301 (365)
T ss_dssp EECHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EEcCCccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 666544 11126789999999999998777643
No 173
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=24.53 E-value=3.4e+02 Score=23.43 Aligned_cols=155 Identities=15% Similarity=0.134 Sum_probs=78.8
Q ss_pred cceeeccccCCChHHHHHHHHHHHHcCCCEEeCCCCcC-----CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCCh
Q 044053 28 VIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAAMYG-----TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHR 102 (327)
Q Consensus 28 ~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-----sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~ 102 (327)
.++.|...++ ......+.+..+++.+.. .|+ -++.+.+.+.+.. |.....+++++++-
T Consensus 31 ~~~~~~~~~~-~~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~la~~l~~~~--g~~~~~~~i~~~~g-------- 93 (391)
T 3dzz_A 31 PMWIAEMDFK-IAPEIMASMEEKLKVAAF------GYESVPAEYYKAVADWEEIEH--RARPKEDWCVFASG-------- 93 (391)
T ss_dssp ECCSSCCSSC-CCHHHHHHHHHHHTTCCC------CCBCCCHHHHHHHHHHHHHHH--SCCCCGGGEEEESC--------
T ss_pred eccccCCCCC-CCHHHHHHHHHHHhcCcC------CCCCCCHHHHHHHHHHHHHHh--CCCCCHHHEEECCC--------
Confidence 3444444443 446677778888877633 343 2344555554432 31104566666543
Q ss_pred hhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC-CccEEEec---c---c
Q 044053 103 DHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLG-LTKSIGLS---N---F 175 (327)
Q Consensus 103 ~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-kir~iGvS---~---~ 175 (327)
...++...++.+ ++.=|-+++..|.. ...... ++..| ++..+-+. + .
T Consensus 94 --~~~a~~~~~~~l-~~~gd~vl~~~~~~--------------------~~~~~~---~~~~g~~~~~~~~~~~~~~~~~ 147 (391)
T 3dzz_A 94 --VVPAISAMVRQF-TSPGDQILVQEPVY--------------------NMFYSV---IEGNGRRVISSDLIYENSKYSV 147 (391)
T ss_dssp --HHHHHHHHHHHH-SCTTCEEEECSSCC--------------------HHHHHH---HHHTTCEEEECCCEEETTEEEC
T ss_pred --HHHHHHHHHHHh-CCCCCeEEECCCCc--------------------HHHHHH---HHHcCCEEEEeeeeecCCceee
Confidence 122333333333 12235666665532 222222 23344 34444441 2 5
Q ss_pred cHHHHHHHHHhCCCCCeeeecccCccc------ccHHHHHHHHHcCCEEEEecCCC
Q 044053 176 SCKKIETILTFATIPPSINQVEMHPVW------QQRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 176 ~~~~l~~~~~~~~~~~~~~q~~~~~~~------~~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
+.+.++++++..+.+.+++..+.|+.- .-.++.+.|+++|+.++.=...+
T Consensus 148 d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 203 (391)
T 3dzz_A 148 NWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHG 203 (391)
T ss_dssp CHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 788888887633333333333334331 11678899999999998766554
No 174
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=24.37 E-value=2.1e+02 Score=20.89 Aligned_cols=54 Identities=4% Similarity=0.071 Sum_probs=34.7
Q ss_pred eecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCC--CEEeCCCCcC-CHHHHHHHHH
Q 044053 15 LKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGY--RHFDTAAMYG-TEKALGEAIA 75 (327)
Q Consensus 15 ~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi--~~~DTA~~Yg-sE~~lG~~L~ 75 (327)
...|.. | -++-.+++|.+. ..+.++++..-+.|+ .++|--..+. .++.+-+.++
T Consensus 7 ~~~g~~-g-~dv~iv~~Gs~~-----~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~ 63 (118)
T 3ju3_A 7 VLIGEK-E-ADITFVTWGSQK-----GPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLS 63 (118)
T ss_dssp EEESCS-S-CSEEEEEEGGGH-----HHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHT
T ss_pred eeeCCC-C-CCEEEEEECccH-----HHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHc
Confidence 345665 6 778889999876 555666666666675 4677666665 5555555554
No 175
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=24.37 E-value=3.5e+02 Score=23.45 Aligned_cols=99 Identities=11% Similarity=0.072 Sum_probs=64.5
Q ss_pred HHHHHHcCCccEEEeccccHHHHHHHHHhCCCC--------------CeeeecccCcccccHHHHHHHHHcCCEEEEecC
Q 044053 158 MEESQMLGLTKSIGLSNFSCKKIETILTFATIP--------------PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 158 l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~--------------~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~p 223 (327)
+..+++...++-++|+.-+.+..+++.+..+++ ++++-+ ..|-....++...|-+.|+.|+.=+|
T Consensus 40 ~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I-~tP~~~H~~~~~~al~aGkhVl~EKP 118 (350)
T 4had_A 40 VPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYI-PLPTSQHIEWSIKAADAGKHVVCEKP 118 (350)
T ss_dssp HHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEE-CSCGGGHHHHHHHHHHTTCEEEECSC
T ss_pred HHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEE-eCCCchhHHHHHHHHhcCCEEEEeCC
Confidence 455666777888899988877766665543321 122211 22223347788889999999999999
Q ss_pred CCCCCccCCCCcccChHHHHHHHHHcCC----------CHHHHHHHHHHhcC
Q 044053 224 LGAVGKIYGSNQVLENEALKEIAKAHGK----------TVAQVSLRWIVEQG 265 (327)
Q Consensus 224 l~~~G~l~~~~~~~~~~~l~~ia~~~~~----------s~aq~al~w~l~~~ 265 (327)
++. +..+.+++.+.|++.|+ .|.-..++=.++.|
T Consensus 119 la~--------~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G 162 (350)
T 4had_A 119 LAL--------KAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEG 162 (350)
T ss_dssp CCS--------SGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTT
T ss_pred ccc--------chhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcC
Confidence 985 33456788888888764 55555555555554
No 176
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=24.27 E-value=3.6e+02 Score=23.54 Aligned_cols=120 Identities=11% Similarity=0.119 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHHcCCccEEEeccc-cH------HHHHHHHHhCC--CCCeeeecccCcccccHHHHHHHHHcCCEEE
Q 044053 149 MDYRGVWEAMEESQMLGLTKSIGLSNF-SC------KKIETILTFAT--IPPSINQVEMHPVWQQRKLIEFCKAKGIIVT 219 (327)
Q Consensus 149 ~~~~~~~~~l~~l~~~Gkir~iGvS~~-~~------~~l~~~~~~~~--~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~ 219 (327)
.+.+++.+.++++++.| ++.|.++.- ++ +.+.++++... .++ .+..++-....+.+...++.|+..+
T Consensus 91 ls~eei~~~~~~~~~~G-~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i---~i~~s~g~~~~e~l~~L~~aG~~~i 166 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAG-FHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGL---PIMISPGLMDNATLLKAREKGANFL 166 (350)
T ss_dssp CCHHHHHHHHHHHTTSC-CSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCS---CEEEECSSCCHHHHHHHHHTTEEEE
T ss_pred CCHHHHHHHHHHHHHCC-CCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCc---eEEEeCCCCCHHHHHHHHHcCCCEE
Confidence 56899999999998887 565655322 12 23333333221 111 1223443345788999999998766
Q ss_pred EecCCCCCCccCCCCcccChHHHHHHHHHcCCCHHHHHHHHHHhcC----CEEeecC-CCHHHHHHhhc
Q 044053 220 AYSPLGAVGKIYGSNQVLENEALKEIAKAHGKTVAQVSLRWIVEQG----ATVVVKS-LNLERMKQNLG 283 (327)
Q Consensus 220 a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~~~----~~vi~g~-~~~~~l~enl~ 283 (327)
..+ +- ....+.+..+..++...-.--+++++...| ..+++|. .+.+++.+.+.
T Consensus 167 ~i~-lE----------t~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~ 224 (350)
T 3t7v_A 167 ALY-QE----------TYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLR 224 (350)
T ss_dssp ECC-CB----------CSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHH
T ss_pred EEe-ee----------cCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHH
Confidence 532 21 122344555544322222234566766666 4567786 56777766544
No 177
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=23.96 E-value=3.8e+02 Score=23.69 Aligned_cols=152 Identities=13% Similarity=0.092 Sum_probs=87.5
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCcCC-HHHH--HHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMYGT-EKAL--GEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Ygs-E~~l--G~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.+...+..+.+.+.|++.|=.--...+ +..+ =+++++. -.+++.|..-... ..+.+...+-+ +.|+.
T Consensus 143 ~~~~~~~~~~~~~~~g~~~~K~Kvg~~~~~~d~~~v~avr~~-------~g~~~~l~vDaN~-~~~~~~A~~~~-~~l~~ 213 (370)
T 2chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNS-------LGSKAYLRVDVNQ-AWDEQVASVYI-PELEA 213 (370)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHH-------TTTTSEEEEECTT-CCCTHHHHHHH-HHHHT
T ss_pred hhhhHHHHHHHHhhcccceeecccccCChHHHHHHHHHHHHh-------cCCCcEEEecCCC-CCCHHHHHHHH-HHHHh
Confidence 3455666677777889887754333322 2211 2344443 2344444444322 23444443322 33444
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
+ ++.++-.|...+ -++.+.+++++-.|. ..|=|.++...+.++++...+ +++
T Consensus 214 ~-----~~~~iEeP~~~~--------------------d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~--d~i 266 (370)
T 2chr_A 214 L-----GVELIEQPVGRE--------------------NTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSV--DVF 266 (370)
T ss_dssp T-----TCCEEECCSCSS--------------------CHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCC--SEE
T ss_pred c-----CCceecCCCChh--------------------hhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCC--cEE
Confidence 4 555666664321 136777888776664 556677889999998876543 467
Q ss_pred ecccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 195 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 195 q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
|+...-+ ..-.++..+|+++||.++..+.+.+
T Consensus 267 ~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~ 301 (370)
T 2chr_A 267 SLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDS 301 (370)
T ss_dssp CCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCC
T ss_pred EeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCccc
Confidence 6664433 1226789999999999877666643
No 178
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=23.87 E-value=4.3e+02 Score=24.32 Aligned_cols=93 Identities=11% Similarity=0.086 Sum_probs=60.5
Q ss_pred ChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecc--ccHH
Q 044053 101 HRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSN--FSCK 178 (327)
Q Consensus 101 ~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~--~~~~ 178 (327)
+++.+...+.+.++.+ +++++-.|... +-|+.+.+|.++.+|-=.|=-. +++.
T Consensus 271 t~~e~~~~~~~ll~~y-----~i~~IEdPl~~--------------------dD~~g~~~L~~~~~ipI~gDE~~vt~~~ 325 (439)
T 2akz_A 271 TGDQLGALYQDFVRDY-----PVVSIEDPFDQ--------------------DDWAAWSKFTANVGIQIVGDDLTVTNPK 325 (439)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCT--------------------TCHHHHHHHHHTCSSEEEESTTTTTCHH
T ss_pred CHHHHHHHHHHHHHhC-----CCcEEECCCCc--------------------ccHHHHHHHHhCCCCEEEeCCCccCCHH
Confidence 3444444445555543 57888877432 1267888888888876665433 3789
Q ss_pred HHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEE
Q 044053 179 KIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTA 220 (327)
Q Consensus 179 ~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a 220 (327)
.+.++++..-. .++|+..+-. ..-.++..+|+++|+.++.
T Consensus 326 ~~~~~i~~~a~--d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 326 RIERAVEEKAC--NCLLLKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp HHHHHHHTTCC--SEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCC--CEEEechhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 99999886543 3666655432 2226789999999999766
No 179
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=23.64 E-value=3.4e+02 Score=23.83 Aligned_cols=104 Identities=14% Similarity=0.215 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEec---cccHHH
Q 044053 103 DHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLS---NFSCKK 179 (327)
Q Consensus 103 ~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS---~~~~~~ 179 (327)
..-+..+-+.|.++|+++|.+-+.-.|...... ..... .|+.|..+++...++.-.+. |..++.
T Consensus 23 ~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~------------~~~~~-~~e~l~~i~~~~~~~~~~L~r~~~~~~~d 89 (320)
T 3dxi_A 23 SKIVDAYILAMNELPIDYLEVGYRNKPSKEYMG------------KFGYT-PVSVLKHLRNISTKKIAIMLNEKNTTPED 89 (320)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCC------------HHHHC-CHHHHHHHHHHCCSEEEEEEEGGGCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEEecccCCcccccc------------ccccC-hHHHHHHHhhccCCeEEEEecCCCCChhh
Confidence 344555666888999999999877544211000 00010 14555555544456666653 222334
Q ss_pred HHHHHHh--CCCCCeeeecccCc--ccccHHHHHHHHHcCCEEEEe
Q 044053 180 IETILTF--ATIPPSINQVEMHP--VWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 180 l~~~~~~--~~~~~~~~q~~~~~--~~~~~~ll~~~~~~gi~v~a~ 221 (327)
++.+... .+++ .+.+..++ +..-.+.+++++++|+.+...
T Consensus 90 v~~~~~a~~~Gvd--~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 90 LNHLLLPIIGLVD--MIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp HHHHHGGGTTTCS--EEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHhhhcCCC--EEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 5544322 2333 33333222 222367888899999988664
No 180
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=23.51 E-value=26 Score=30.86 Aligned_cols=107 Identities=6% Similarity=0.062 Sum_probs=65.7
Q ss_pred cCCccEEEeccccHHHHHHHHHhCC--CCCeee---ecccCcccccHHHHHHHHHcCCEEEEecCCCCCCccCCCCcccC
Q 044053 164 LGLTKSIGLSNFSCKKIETILTFAT--IPPSIN---QVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLE 238 (327)
Q Consensus 164 ~Gkir~iGvS~~~~~~l~~~~~~~~--~~~~~~---q~~~~~~~~~~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~ 238 (327)
..++-.+-=.+++.+...++.+... + |.+. .+=|--..|+..+.+++++-++-++.-++-. ..
T Consensus 156 ~~kv~~vsQTT~s~~~~~~iv~~L~~r~-p~~~~~~tIC~AT~~RQ~av~~la~~~D~miVVGg~nS-----------SN 223 (297)
T 3dnf_A 156 HERVGIVAQTTQNEEFFKEVVGEIALWV-KEVKVINTICNATSLRQESVKKLAPEVDVMIIIGGKNS-----------GN 223 (297)
T ss_dssp CSEEEEEECTTCCHHHHHHHHHHHHHHS-SEEEEECCCCSHHHHHHHHHHHHGGGSSEEEEESCTTC-----------HH
T ss_pred CCcEEEEEecCCcHHHHHHHHHHHHHhC-CCCCCCCCccHHHHHHHHHHHHHHhhCCEEEEECCCCC-----------ch
Confidence 3445555555666666655544322 2 1221 1111112344678888998888887633332 23
Q ss_pred hHHHHHHHHHcCC------CHHHHHHHHHHhcC-CEEeecCCCHHHHHHhh
Q 044053 239 NEALKEIAKAHGK------TVAQVSLRWIVEQG-ATVVVKSLNLERMKQNL 282 (327)
Q Consensus 239 ~~~l~~ia~~~~~------s~aq~al~w~l~~~-~~vi~g~~~~~~l~enl 282 (327)
..+|.++|++.|. +..++-..|.-... +.+..|+|+|+-|-+.+
T Consensus 224 T~rL~eia~~~~~~ty~Ie~~~el~~~wl~~~~~VGITAGASTP~~li~eV 274 (297)
T 3dnf_A 224 TRRLYYISKELNPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQV 274 (297)
T ss_dssp HHHHHHHHHHHCSSEEEESSGGGCCGGGGTTCSEEEEEECTTCCHHHHHHH
T ss_pred hHHHHHHHHhcCCCEEEeCChHHCCHHHhCCCCEEEEeecCCCCHHHHHHH
Confidence 5789999999874 66777778876554 67889999998765543
No 181
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=23.45 E-value=2e+02 Score=20.34 Aligned_cols=62 Identities=10% Similarity=0.032 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEe
Q 044053 153 GVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 153 ~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~ 221 (327)
.++..|.-..+.|++. ....+..++++......+++--..++. ....+..+|+.++|+++-+
T Consensus 5 ki~~~L~la~kagk~v------~G~~~v~kai~~gka~lViiA~D~~~~-~~~~i~~~c~~~~ip~~~~ 66 (101)
T 3on1_A 5 KWLSLLGLAARARQLL------TGEEQVVKAVQNGQVTLVILSSDAGIH-TKKKLLDKCGSYQIPVKVV 66 (101)
T ss_dssp HHHHHHHHHHHTTCEE------ESHHHHHHHHHTTCCSEEEEETTSCHH-HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHCCEe------ECHHHHHHHHHcCCCcEEEEeCCCCHH-HHHHHHHHHHHcCCCEEEe
Confidence 4677888889999865 245677788887777766766666653 2367888999999998753
No 182
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=23.32 E-value=4.9e+02 Score=24.84 Aligned_cols=88 Identities=15% Similarity=0.001 Sum_probs=56.2
Q ss_pred HhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeee
Q 044053 115 ALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 115 rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
.-|-|.||+= |+... ....++.-+.+..+++.-.+ -|.|-+++++.++.+++.+.-...+|
T Consensus 351 ~~GAdiIDIg----pg~~~--------------v~~~ee~~rvv~~i~~~~~v-pisIDT~~~~v~eaal~~~~G~~iIN 411 (566)
T 1q7z_A 351 EKGAEVLDVN----FGIES--------------QIDVRYVEKIVQTLPYVSNV-PLSLDIQNVDLTERALRAYPGRSLFN 411 (566)
T ss_dssp HTTCSEEEEE----CSSGG--------------GSCHHHHHHHHHHHHHHTCS-CEEEECCCHHHHHHHHHHCSSCCEEE
T ss_pred HCCCCEEEEC----CCCCC--------------CCHHHHHHHHHHHHHhhCCc-eEEEeCCCHHHHHHHHHhcCCCCEEE
Confidence 5688999987 42210 01133333444444433122 37888899999999999854345566
Q ss_pred ecccCccccc--HHHHHHHHHcCCEEEEecCC
Q 044053 195 QVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPL 224 (327)
Q Consensus 195 q~~~~~~~~~--~~ll~~~~~~gi~v~a~~pl 224 (327)
-+.. .. + .++++.++++|..++.+..-
T Consensus 412 dis~--~~-~~~~~~~~~~~~~g~~vV~m~~~ 440 (566)
T 1q7z_A 412 SAKV--DE-EELEMKINLLKKYGGTLIVLLMG 440 (566)
T ss_dssp EEES--CH-HHHHHHHHHHHHHCCEEEEESCS
T ss_pred ECCc--ch-hhHHHHHHHHHHhCCeEEEEeCC
Confidence 4443 22 4 68999999999999998643
No 183
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=23.30 E-value=1.9e+02 Score=23.82 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC-ccEEEecc-ccHHHHHH
Q 044053 105 VIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGL-TKSIGLSN-FSCKKIET 182 (327)
Q Consensus 105 i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk-ir~iGvS~-~~~~~l~~ 182 (327)
+.+.++ .++++|.++|++...|.+.. .+..++-+.-+.+.+.|. +-.++... -..+.+++
T Consensus 32 ~~~~l~-~~~~~G~~~vEl~~~~~~~~-----------------~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~ 93 (257)
T 3lmz_A 32 LDTTLK-TLERLDIHYLCIKDFHLPLN-----------------STDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDR 93 (257)
T ss_dssp HHHHHH-HHHHTTCCEEEECTTTSCTT-----------------CCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHH
T ss_pred HHHHHH-HHHHhCCCEEEEecccCCCC-----------------CCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHH
Confidence 444443 36788999999886664311 123333333445566675 22333322 23566666
Q ss_pred HHHhC---CCCCeeeecccCccccc-HHHHHHHHHcCCEEEEecCCC
Q 044053 183 ILTFA---TIPPSINQVEMHPVWQQ-RKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 183 ~~~~~---~~~~~~~q~~~~~~~~~-~~ll~~~~~~gi~v~a~~pl~ 225 (327)
.++.+ +.+.++. . +-... .++.+.|+++||.+ ++-+.+
T Consensus 94 ~i~~A~~lGa~~v~~--~--p~~~~l~~l~~~a~~~gv~l-~lEn~~ 135 (257)
T 3lmz_A 94 AFDYAKRVGVKLIVG--V--PNYELLPYVDKKVKEYDFHY-AIHLHG 135 (257)
T ss_dssp HHHHHHHHTCSEEEE--E--ECGGGHHHHHHHHHHHTCEE-EEECCC
T ss_pred HHHHHHHhCCCEEEe--c--CCHHHHHHHHHHHHHcCCEE-EEecCC
Confidence 66554 3333232 1 21122 77999999999975 455553
No 184
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=23.10 E-value=4.7e+02 Score=25.27 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=21.0
Q ss_pred CcEEEEeccCCC-----CCChhhHHHHHHHHHHHhCCCceeE
Q 044053 87 EQLFITSKLWCQ-----NAHRDHVIPALKKSLSALQMEYLDL 123 (327)
Q Consensus 87 ~~v~I~tK~~~~-----~~~~~~i~~~le~SL~rL~~d~iDl 123 (327)
+++.|..|+... ..+.+.. ..+-+.|+..|.|||++
T Consensus 207 ~~~~v~vrls~~~~~~~g~~~~~~-~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 207 NDFIIIYRLSMLDLVEDGGTFAET-VELAQAIEAAGATIINT 247 (671)
T ss_dssp SSSEEEEEEEEECCSTTCCCHHHH-HHHHHHHHHHTCSEEEE
T ss_pred CCceEEEEECccccCCCCCCHHHH-HHHHHHHHhcCCCEEEc
Confidence 456677776432 2333433 23446678889888875
No 185
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=22.74 E-value=3.9e+02 Score=23.41 Aligned_cols=88 Identities=9% Similarity=-0.048 Sum_probs=46.4
Q ss_pred cEEEEeccCCC-----CCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 044053 88 QLFITSKLWCQ-----NAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQ 162 (327)
Q Consensus 88 ~v~I~tK~~~~-----~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 162 (327)
++-|..|+... ..+.+.. ..+-+.|+..|+|||++ |....... ..+. . . ...++.+.+++
T Consensus 209 ~~pv~vris~~~~~~~g~~~~~~-~~~a~~l~~~Gvd~i~v---~~~~~~~~---~~~~--~---~---~~~~~~~~~ir 273 (338)
T 1z41_A 209 DGPLFVRVSASDYTDKGLDIADH-IGFAKWMKEQGVDLIDC---SSGALVHA---DINV--F---P---GYQVSFAEKIR 273 (338)
T ss_dssp CSCEEEEEECCCCSTTSCCHHHH-HHHHHHHHHTTCCEEEE---ECCCSSCC---CCCC--C---T---TTTHHHHHHHH
T ss_pred CCcEEEEecCcccCCCCCCHHHH-HHHHHHHHHcCCCEEEE---ecCccccC---CCCC--C---c---cchHHHHHHHH
Confidence 34566676443 2233332 34455677888777765 43321100 0000 0 0 00134445555
Q ss_pred HcCCccEEEeccc-cHHHHHHHHHhCCCC
Q 044053 163 MLGLTKSIGLSNF-SCKKIETILTFATIP 190 (327)
Q Consensus 163 ~~Gkir~iGvS~~-~~~~l~~~~~~~~~~ 190 (327)
+.=++--|++..+ +++.++++++....+
T Consensus 274 ~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD 302 (338)
T 1z41_A 274 EQADMATGAVGMITDGSMAEEILQNGRAD 302 (338)
T ss_dssp HHHCCEEEECSSCCSHHHHHHHHHTTSCS
T ss_pred HHCCCCEEEECCCCCHHHHHHHHHcCCce
Confidence 5446777888777 688999998876544
No 186
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=22.71 E-value=2.3e+02 Score=23.40 Aligned_cols=58 Identities=17% Similarity=0.165 Sum_probs=43.4
Q ss_pred HHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcCCCHHHHHHHHHHhc-C--CEEeecC--CCHHHHH
Q 044053 205 RKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHGKTVAQVSLRWIVEQ-G--ATVVVKS--LNLERMK 279 (327)
Q Consensus 205 ~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~~-~--~~vi~g~--~~~~~l~ 279 (327)
.+.+++.+++|+.++-+.|=- ..|-.+.|++|++.+ + .+++.|+ ...+|.-
T Consensus 51 ~~~~~~~~~~~~~i~~~~~eK------------------------D~TD~e~Al~~a~~~~~~~~I~i~Ga~GGR~DH~l 106 (218)
T 3ihk_A 51 AEEFKQIKAKAKKLVMAPAEK------------------------NDTDTELALKTIFDCFGRVEIIVFGAFGGRIDHML 106 (218)
T ss_dssp HHHHHHHHTTCSSEEECCSSC------------------------SSCHHHHHHHHHHHHTSSCEEEEESCSSSCHHHHH
T ss_pred HHHHHHHHhcCCeEEECCCCC------------------------CCCHHHHHHHHHHHhCCCCEEEEECCCCCchhhHH
Confidence 567788888888877664432 246678899999987 5 5677887 4799999
Q ss_pred Hhhcccc
Q 044053 280 QNLGIFD 286 (327)
Q Consensus 280 enl~a~~ 286 (327)
.|+..+-
T Consensus 107 ani~lL~ 113 (218)
T 3ihk_A 107 SNIFLPS 113 (218)
T ss_dssp HHHTGGG
T ss_pred HHHHHHH
Confidence 9997654
No 187
>3epo_A Thiamine biosynthesis protein THIC; alpha-beta barrel, SAM superfamily, biosynthetic protein; HET: MP5; 2.10A {Caulobacter crescentus} PDB: 3epm_A* 3epn_A*
Probab=22.62 E-value=5.2e+02 Score=24.79 Aligned_cols=187 Identities=11% Similarity=0.164 Sum_probs=100.6
Q ss_pred CChHHHHHHHHHHHHcCCCEE-eCCCCcCCHHHHHHHHHHHHhcCCCCCCCcEEEEe--------ccC--CCCCChhhHH
Q 044053 38 SDTDALKLAVLEAIKLGYRHF-DTAAMYGTEKALGEAIAEALRLGLVSSREQLFITS--------KLW--CQNAHRDHVI 106 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gi~~~-DTA~~YgsE~~lG~~L~~~~~~g~~~~R~~v~I~t--------K~~--~~~~~~~~i~ 106 (327)
.+.++-.+-+..|++.|-..+ |-+ ..|+-..+-+++- ....+=|-| |+. ..+.+.+.+.
T Consensus 227 ~~ie~EveK~~~A~~~GADtvMDLS-TGgdi~~~R~~Il---------~~spvPiGTVPIYqA~~k~~g~~~~lt~e~~~ 296 (612)
T 3epo_A 227 STVADEVDKLVWATRWGADTVMDLS-TGRNIHNIRDWII---------RNSSVPIGTVPIYQALEKVNGVAEDLNWEVFR 296 (612)
T ss_dssp -CHHHHHHHHHHHHHTTCSEEEECC-CSTTHHHHHHHHH---------TTCSSCEEECHHHHHHHHTTTCGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecc-CCCCHHHHHHHHH---------HcCCCCccCcchHHHHHHhCCChhhCCHHHHH
Confidence 344555566789999997654 655 3455444555553 222333333 221 2356778888
Q ss_pred HHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHh
Q 044053 107 PALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTF 186 (327)
Q Consensus 107 ~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~ 186 (327)
..+++..+ +-||.+-+|.-... +.++. ..+ |..|+-+-...-+...+..
T Consensus 297 d~ie~QAe----qGVDfmTIHaGv~~-----------------------~~v~~--~~~--R~tgIVSRGGSima~Wml~ 345 (612)
T 3epo_A 297 DTLIEQCE----QGVDYFTIHAGVRL-----------------------PFIPM--TAK--RVTGIVSRGGSIMAKWCLA 345 (612)
T ss_dssp HHHHHHHH----HTCCEEEECTTCCG-----------------------GGGGG--GTT--SSSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHH----hCCCEEEEcccccH-----------------------HHHHH--hcC--CcCCeecCcHHHHHHHHHH
Confidence 88887776 45788899975321 11111 233 5567666666666555443
Q ss_pred CCCCCeeeecccCccccc-HHHHHHHHHcCCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcCCCHHHHHHHHHHhcC
Q 044053 187 ATIPPSINQVEMHPVWQQ-RKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHGKTVAQVSLRWIVEQG 265 (327)
Q Consensus 187 ~~~~~~~~q~~~~~~~~~-~~ll~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~~~ 265 (327)
.. .=|+++.. .++++.|++++|.+.----|.. |.+.... +...+.++ .++.+++ +-+..++
T Consensus 346 ~~--------kENplYe~FD~ileI~k~YDVtlSLGDglRP-G~iaDA~---D~AQ~~EL-----~~LGELt-krAwe~g 407 (612)
T 3epo_A 346 HH--------KENFLYERFDEICEIMRAYDVSFSLGDGLRP-GSTADAN---DEAQFSEL-----RTLGELT-KVAWKHG 407 (612)
T ss_dssp HT--------CCCHHHHTHHHHHHHHTTTTCEEEECCTTCC-SSGGGTT---CHHHHHHH-----HHHHHHH-HHHHHTT
T ss_pred cC--------CcChHHHHHHHHHHHHHHhCeEEecccccCC-CccccCC---cHHHHHHH-----HHHHHHH-HHHHHcC
Confidence 22 33556555 7899999999999854333322 3332211 12223332 1222222 2223455
Q ss_pred C-EEe--ecCCCHHHHHHhhc
Q 044053 266 A-TVV--VKSLNLERMKQNLG 283 (327)
Q Consensus 266 ~-~vi--~g~~~~~~l~enl~ 283 (327)
+ +.| ||---..++++|++
T Consensus 408 VQVMIEGPGHVPl~~I~~Nv~ 428 (612)
T 3epo_A 408 VQVMIEGPGHVAMHKIKANMD 428 (612)
T ss_dssp CCEEEECCCBCCHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHH
Confidence 3 444 34456788888875
No 188
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=22.45 E-value=4.2e+02 Score=23.71 Aligned_cols=65 Identities=11% Similarity=-0.063 Sum_probs=42.3
Q ss_pred HHHHHHHHHc-----CCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcc--cccHHHHHHHHHcCCEEEEe
Q 044053 155 WEAMEESQML-----GLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPV--WQQRKLIEFCKAKGIIVTAY 221 (327)
Q Consensus 155 ~~~l~~l~~~-----Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~--~~~~~ll~~~~~~gi~v~a~ 221 (327)
++.+.++++. -.|-=.+--.++...++++++.... +++|+..+-. ..-.++...|+++|+.++..
T Consensus 240 ~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~--d~v~ik~~~~Git~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 240 EALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRV--DVLQYDIIWPGFTHWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSC--CEECCBTTTBCHHHHHHHHHHHHHTTCEECCB
T ss_pred HHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCC--CEEEeCccccCHHHHHHHHHHHHHcCCEEEec
Confidence 4556666665 3443332225567788888876543 4777776654 22267899999999999875
No 189
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=22.16 E-value=4e+02 Score=23.34 Aligned_cols=99 Identities=12% Similarity=0.030 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC-CccEEEeccccHHHHHHH
Q 044053 105 VIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLG-LTKSIGLSNFSCKKIETI 183 (327)
Q Consensus 105 i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-kir~iGvS~~~~~~l~~~ 183 (327)
-+..+-+.|.++|+++|.+- +|.. ...-|+.++++++.. .++..+++--....++.+
T Consensus 29 ~Kl~ia~~L~~~Gv~~IE~g---~p~~-------------------~~~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a 86 (325)
T 3eeg_A 29 EKIIVAKALDELGVDVIEAG---FPVS-------------------SPGDFNSVVEITKAVTRPTICALTRAKEADINIA 86 (325)
T ss_dssp HHHHHHHHHHHHTCSEEEEE---CTTS-------------------CHHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEe---CCCC-------------------CHhHHHHHHHHHHhCCCCEEEEeecCCHHHHHHH
Confidence 34445556888999999986 2321 123355666666643 466667765556666666
Q ss_pred HHh---CCCCCeeeecccCcccc--------------cHHHHHHHHHcCCEEEEecCCC
Q 044053 184 LTF---ATIPPSINQVEMHPVWQ--------------QRKLIEFCKAKGIIVTAYSPLG 225 (327)
Q Consensus 184 ~~~---~~~~~~~~q~~~~~~~~--------------~~~ll~~~~~~gi~v~a~~pl~ 225 (327)
++. ++.+.+.+-+..|.... -.+.+++|+++|+.+.-..|.+
T Consensus 87 ~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~ 145 (325)
T 3eeg_A 87 GEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDA 145 (325)
T ss_dssp HHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETG
T ss_pred HHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 554 23322222222222211 1578999999999876544543
No 190
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=21.93 E-value=2.3e+02 Score=23.81 Aligned_cols=20 Identities=20% Similarity=0.287 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHHHcCCCEEe
Q 044053 40 TDALKLAVLEAIKLGYRHFD 59 (327)
Q Consensus 40 ~~~~~~~l~~A~~~Gi~~~D 59 (327)
++.....++.|++.|+.+|+
T Consensus 22 PENTl~Af~~A~~~Gad~iE 41 (272)
T 3ch0_A 22 PENTIAAFTKALLLGVTTLE 41 (272)
T ss_dssp STTSHHHHHHHHHHTCSEEE
T ss_pred CcccHHHHHHHHHcCCCEEE
Confidence 46667788999999999884
No 191
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=21.84 E-value=3.6e+02 Score=22.74 Aligned_cols=131 Identities=15% Similarity=0.056 Sum_probs=69.3
Q ss_pred ccCeeecCCCCCCcccCcceeeccccCCChHHHHHHHHHHHHcCCCEEeC----CCCcCCHHHHHHHHHHHHhcCCCCCC
Q 044053 11 NVPKLKLSSSSGHLNMPVIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDT----AAMYGTEKALGEAIAEALRLGLVSSR 86 (327)
Q Consensus 11 ~m~~~~Lg~t~g~~~vs~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DT----A~~YgsE~~lG~~L~~~~~~g~~~~R 86 (327)
.++-+++|. | .|.|+.=... .+.++..+-++.+...|...+.- -....+-..+.+.+..... .. ..
T Consensus 9 ~v~~~~ig~--g---~PkIcvpl~~--~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~-~~--~~ 78 (258)
T 4h3d_A 9 QVKNITIGE--G---RPKICVPIIG--KNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRS-YI--HD 78 (258)
T ss_dssp EETTEEETS--S---SCEEEEEECC--SSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHH-HC--TT
T ss_pred EEcCEEeCC--C---CCEEEEEeCC--CCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHH-hc--CC
Confidence 355667777 7 3777654443 56677777778888889877632 2222244556666554311 00 12
Q ss_pred CcEEEEecc----CCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 044053 87 EQLFITSKL----WCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQ 162 (327)
Q Consensus 87 ~~v~I~tK~----~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 162 (327)
-.+.++... +....+.+.-..-+....+.-..||||+=+.+ .++..+.+.+..
T Consensus 79 lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~-----------------------~~~~~~~l~~~a 135 (258)
T 4h3d_A 79 IPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFM-----------------------GDEVIDEVVNFA 135 (258)
T ss_dssp SCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGG-----------------------CHHHHHHHHHHH
T ss_pred CCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhc-----------------------cHHHHHHHHHHH
Confidence 234555443 12223333333333333333348999976533 234556666655
Q ss_pred HcCCccEEEeccc
Q 044053 163 MLGLTKSIGLSNF 175 (327)
Q Consensus 163 ~~Gkir~iGvS~~ 175 (327)
+++.++-| +|.|
T Consensus 136 ~~~~~kiI-~S~H 147 (258)
T 4h3d_A 136 HKKEVKVI-ISNH 147 (258)
T ss_dssp HHTTCEEE-EEEE
T ss_pred HhCCCEEE-EEEe
Confidence 56666655 4555
No 192
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=21.72 E-value=4.4e+02 Score=23.67 Aligned_cols=150 Identities=8% Similarity=0.020 Sum_probs=90.1
Q ss_pred ChHHHHHHHHHHHHcCCCEEeCCCCc-CCHHH--HHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHH
Q 044053 39 DTDALKLAVLEAIKLGYRHFDTAAMY-GTEKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 115 (327)
Q Consensus 39 ~~~~~~~~l~~A~~~Gi~~~DTA~~Y-gsE~~--lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~r 115 (327)
+.++..+.++.+++.|++.|-.=-.- .-+.- .=+++++.+ ..+++-|...... ..+.+.. .+-+++
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~------gg~~~~L~vDaN~-~w~~~~A----~~~~~~ 232 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERI------RGTGTRLAVDGNR-SLPSRDA----LRLSRE 232 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHH------TTTTCEEEEECTT-CCCHHHH----HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHh------CCCCCeEEEeCCC-CCCHHHH----HHHHHH
Confidence 56777778888899999998642211 11111 223444431 1145566666432 2333322 233455
Q ss_pred hCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCeee
Q 044053 116 LQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPSIN 194 (327)
Q Consensus 116 L~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~ 194 (327)
|. -.++ ++-.|.. -++.+.++++.-.|. ..|=|.++...+.++++.... +++
T Consensus 233 L~--~~~i-~iEeP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~--d~v 285 (391)
T 4e8g_A 233 CP--EIPF-VLEQPCN----------------------TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLC--DGF 285 (391)
T ss_dssp CT--TSCE-EEESCSS----------------------SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCC--SEE
T ss_pred Hh--hcCe-EEecCCc----------------------cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC--CEE
Confidence 54 2467 6766511 146677777765554 556677889999999886544 467
Q ss_pred ecccCcc---cccHHHHHHHHHcCCEEEEecCCCC
Q 044053 195 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 195 q~~~~~~---~~~~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
|+....+ ..-.++...|+++|+.++..+.+.+
T Consensus 286 ~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 320 (391)
T 4e8g_A 286 GMKLTRIGGLQQMAAFRDICEARALPHSCDDAWGG 320 (391)
T ss_dssp EEEHHHHTSHHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCeEEeCCcCCC
Confidence 7665433 2236789999999999998877754
No 193
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=21.66 E-value=4.4e+02 Score=23.64 Aligned_cols=93 Identities=13% Similarity=0.152 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC-ccEEEeccccHHHHHHH
Q 044053 105 VIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGL-TKSIGLSNFSCKKIETI 183 (327)
Q Consensus 105 i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk-ir~iGvS~~~~~~l~~~ 183 (327)
-+..+-+.|.++|+++|.+-+ |.. .....+.++.+++.|+ ++..+.+....+.++.+
T Consensus 26 ~k~~ia~~L~~~Gv~~IE~g~---p~~-------------------~~~~~~~~~~i~~~~~~~~v~~~~r~~~~di~~a 83 (382)
T 2ztj_A 26 DKVEIAKALDEFGIEYIEVTT---PVA-------------------SPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKVA 83 (382)
T ss_dssp HHHHHHHHHHHHTCSEEEECC---TTS-------------------CHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCcCEEEEcC---CcC-------------------CHHHHHHHHHHHhcCCCcEEEEEcccChhhHHHH
Confidence 355566778889999999842 321 2334567777777774 44444444456778877
Q ss_pred HHhCCCCCeeeecccCcc-------------cccHHHHHHHHHcC--CEEEE
Q 044053 184 LTFATIPPSINQVEMHPV-------------WQQRKLIEFCKAKG--IIVTA 220 (327)
Q Consensus 184 ~~~~~~~~~~~q~~~~~~-------------~~~~~ll~~~~~~g--i~v~a 220 (327)
++. +++.+-+-+..|.. ..-.+.+++++++| +.+..
T Consensus 84 ~~~-g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~ 134 (382)
T 2ztj_A 84 VET-GVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRF 134 (382)
T ss_dssp HHT-TCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHc-CCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 774 44322221222221 11156788999999 77654
No 194
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=21.57 E-value=3.9e+02 Score=22.99 Aligned_cols=66 Identities=14% Similarity=0.108 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHc-CCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecC
Q 044053 151 YRGVWEAMEESQML-GLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 151 ~~~~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~p 223 (327)
.+.+...++.+++. +. -|.|-++.++.++.+++.. ...+|-+.. . ...++++.++++|.+++.+..
T Consensus 75 ~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aG--a~iINdvsg--~-~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 75 LQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVG--AHIINDIRS--L-SEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp HHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTT--CCEEEETTT--T-CSTTHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcC--CCEEEECCC--C-CCHHHHHHHHHhCCeEEEEcc
Confidence 34455666666665 32 4788899999999999973 344664443 2 456899999999999999854
No 195
>1s5l_U Photosystem II 12 kDa extrinsic protein; photosynthesis, oxygen-evolving, tetra- manganese, membrane; HET: CL1 PHO HEM PL9 LMT BCR; 3.50A {Thermosynechococcus elongatus}
Probab=21.55 E-value=30 Score=26.59 Aligned_cols=37 Identities=14% Similarity=0.252 Sum_probs=20.4
Q ss_pred ccCHHHHHHHhcCCCCCccCCccccCCCCCcccccccc
Q 044053 288 KLTDDDYDKINQIPQHRLIPSDFWVSPQGPFKTLEELW 325 (327)
Q Consensus 288 ~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (327)
.|..+..++|..+..=.+....... -||||++.|||-
T Consensus 56 niNtA~~~eL~~LpGiGp~~A~~II-~~GpF~svedL~ 92 (134)
T 1s5l_U 56 DLNNTNIAAFIQYRGLYPTLAKLIV-KNAPYESVEDVL 92 (134)
T ss_dssp ETTTSCGGGGGGSTTCTHHHHHHHH-HTCCCSSGGGGG
T ss_pred eCcccCHHHHHHCCCCCHHHHHHHH-HcCCCCCHHHHH
Confidence 3444444444444333333333333 478999999984
No 196
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=21.51 E-value=3.8e+02 Score=23.26 Aligned_cols=66 Identities=12% Similarity=0.254 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEecC
Q 044053 151 YRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 151 ~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~p 223 (327)
...+...++.+++.+ + -|.|-+++++.++.+++.+. ..+|- .+-. ..+++++.++++|..++.+..
T Consensus 89 ~~Rv~pvI~~l~~~~-v-piSIDT~~~~Va~aAl~aGa--~iINd--Vsg~-~d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 89 KRRLLPVLEAVLSLG-V-PVSVDTRKPEVAEEALKLGA--HLLND--VTGL-RDERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp HHHHHHHHHHHHTTC-S-CEEEECSCHHHHHHHHHHTC--SEEEC--SSCS-CCHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHhCC-C-eEEEECCCHHHHHHHHHhCC--CEEEE--CCCC-CChHHHHHHHHhCCCEEEEcC
Confidence 667778888888763 2 47889999999999999742 24553 3333 557999999999999999854
No 197
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=21.49 E-value=4.3e+02 Score=23.46 Aligned_cols=149 Identities=11% Similarity=0.070 Sum_probs=88.7
Q ss_pred CChHHHHHHHHHHHHc-CCCEEeCCCCc-C--CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 044053 38 SDTDALKLAVLEAIKL-GYRHFDTAAMY-G--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSL 113 (327)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gi~~~DTA~~Y-g--sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL 113 (327)
.+.++..+..+.+++. |++.|-.=-.- . .....=+++++. --+++-|..... ...+.+... +-+
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~-------~g~~~~l~vDan-~~~~~~~a~----~~~ 217 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER-------VDSAVRIAIDGN-GKWDLPTCQ----RFC 217 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH-------SCTTCEEEEECT-TCCCHHHHH----HHH
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH-------cCCCCcEEeeCC-CCCCHHHHH----HHH
Confidence 3567777778888999 99988643221 1 111122455553 234555666642 233443332 233
Q ss_pred HHhCCCceeEEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEeccccHHHHHHHHHhCCCCCe
Q 044053 114 SALQMEYLDLYLVHLPISSKPGEVGFPVPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSCKKIETILTFATIPPS 192 (327)
Q Consensus 114 ~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Gkir-~iGvS~~~~~~l~~~~~~~~~~~~ 192 (327)
++|. -.++.++..|.+. +-++.+.+++++-.|. ..|=+-++...+.++++.... +
T Consensus 218 ~~l~--~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d 273 (372)
T 3tj4_A 218 AAAK--DLDIYWFEEPLWY--------------------DDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAV--A 273 (372)
T ss_dssp HHTT--TSCEEEEESCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--S
T ss_pred HHHh--hcCCCEEECCCCc--------------------hhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCC--C
Confidence 4442 3466777766431 1246667777765454 455567889999999886543 4
Q ss_pred eeecccCcc---cccHHHHHHHHHcCCEEEEec
Q 044053 193 INQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 193 ~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~ 222 (327)
++|+..+-+ ..-.++...|+++|+.++..+
T Consensus 274 ~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 274 YVQPDVTRLGGITEYIQVADLALAHRLPVVPHA 306 (372)
T ss_dssp EECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 777766553 223678999999999987544
No 198
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=21.26 E-value=2.2e+02 Score=23.49 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=23.9
Q ss_pred cceeeccccCCChHHHHHHHHHHHHcCCCEEeCCC
Q 044053 28 VIGLGCAVDKSDTDALKLAVLEAIKLGYRHFDTAA 62 (327)
Q Consensus 28 ~lglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~ 62 (327)
+||+-++.+. .....+.++.+-+.|++.++...
T Consensus 11 klg~~~~~~~--~~~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 11 RLGMQSYSFH--LFPLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp EEEEEGGGGT--TSCHHHHHHHHHHTTCCEEEECT
T ss_pred EEEEEecccC--CCCHHHHHHHHHHcCCCEEeecC
Confidence 3666666654 12356778999999999999874
No 199
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=21.21 E-value=3.9e+02 Score=22.86 Aligned_cols=121 Identities=15% Similarity=0.112 Sum_probs=65.1
Q ss_pred CCHHHHHHHHHHHHHcCCccEEEec-----cccH-----HHHHHHHHhC----CCCCeeeecccCcccccHHHHHHHHHc
Q 044053 149 MDYRGVWEAMEESQMLGLTKSIGLS-----NFSC-----KKIETILTFA----TIPPSINQVEMHPVWQQRKLIEFCKAK 214 (327)
Q Consensus 149 ~~~~~~~~~l~~l~~~Gkir~iGvS-----~~~~-----~~l~~~~~~~----~~~~~~~q~~~~~~~~~~~ll~~~~~~ 214 (327)
...+++++.++.+.+.| ++.|-++ .|.. ..+.++++.. ++. .+.-...|+..-..++++..++.
T Consensus 33 r~~e~i~~ei~~l~~~G-~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~-~ir~~~~~p~~l~~e~l~~l~~~ 110 (304)
T 2qgq_A 33 RSIEDITREVEDLLKEG-KKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEF-WIRVMYLHPDHLTEEIISAMLEL 110 (304)
T ss_dssp CCHHHHHHHHHHHHHTT-CCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSC-EEEECCCCGGGCCHHHHHHHHHC
T ss_pred eCHHHHHHHHHHHHHCC-CcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCc-EEEEeeeecccCCHHHHHHHHhC
Confidence 45889999999999987 4555432 1211 2234443322 222 11112345544468899999998
Q ss_pred C--CEEEEecCCCCCCccCCCCcccChHHHHHHHHHcCCCHHH--HHHHHHHh--cC----CEEeecC--CCHHHHHHhh
Q 044053 215 G--IIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHGKTVAQ--VSLRWIVE--QG----ATVVVKS--LNLERMKQNL 282 (327)
Q Consensus 215 g--i~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq--~al~w~l~--~~----~~vi~g~--~~~~~l~enl 282 (327)
| +..+..+.-. ..++.++.+.+. .+..+ -+++.+.. .+ +.+|+|. .+.+++++.+
T Consensus 111 g~~~~~l~i~lqs-----------~s~~vl~~m~r~--~t~e~~~~~i~~l~~~~~gi~i~~~~IvG~PgEt~ed~~~t~ 177 (304)
T 2qgq_A 111 DKVVKYFDVPVQH-----------GSDKILKLMGRT--KSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELK 177 (304)
T ss_dssp TTBCCEEECCCBC-----------SCHHHHHHTTCC--SCHHHHHHHHHHHHHHCTTCEEEEEEEECCTTCCHHHHHHHH
T ss_pred CCCccEEEEeccc-----------CCHHHHHHhCCC--CCHHHHHHHHHHHHhhCCCCEEEEEEEEeCCCCCHHHHHHHH
Confidence 8 5555543222 123444444332 23333 34555555 34 2457775 5778777766
Q ss_pred cc
Q 044053 283 GI 284 (327)
Q Consensus 283 ~a 284 (327)
+.
T Consensus 178 ~~ 179 (304)
T 2qgq_A 178 QF 179 (304)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 200
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=21.15 E-value=2.8e+02 Score=23.85 Aligned_cols=107 Identities=9% Similarity=0.113 Sum_probs=59.1
Q ss_pred HHHHHHcCCccEEEeccccHHHHHHHHHhCC-CCCeeee-------------cc-------cCccc--ccHHHHHHHHHc
Q 044053 158 MEESQMLGLTKSIGLSNFSCKKIETILTFAT-IPPSINQ-------------VE-------MHPVW--QQRKLIEFCKAK 214 (327)
Q Consensus 158 l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~-~~~~~~q-------------~~-------~~~~~--~~~~ll~~~~~~ 214 (327)
++.+++.|....+=+++|+...+.++.+... ++....- ++ +++-. ...++++.|+++
T Consensus 148 ~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~ 227 (292)
T 3mz2_A 148 AQLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHER 227 (292)
T ss_dssp HHHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHC
Confidence 4455666777888899999999888877653 2211110 00 00000 125688888888
Q ss_pred CCEEEEecCCCCCCccCCCCcccChHHHHHHHHHcCCCHHHHHHHHHHhcCCEEeecCCCHHHHHHhhcc
Q 044053 215 GIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKAHGKTVAQVSLRWIVEQGATVVVKSLNLERMKQNLGI 284 (327)
Q Consensus 215 gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~~~~~vi~g~~~~~~l~enl~a 284 (327)
|+.|.+|.+-.. +..... .-..-.+++++..|+-.| -+..|+.+.+-++.
T Consensus 228 G~~V~vWTv~t~--------d~~~~~-----------~~~~~~~~~L~~~GVDgI-iTD~P~~l~~~L~~ 277 (292)
T 3mz2_A 228 GVMCMISTAPSD--------DKLSTP-----------ESRAEAYRMIIRQGVDII-ESDRPIEVAEAISS 277 (292)
T ss_dssp TBCEEEECTTTG--------GGSSSH-----------HHHHHHHHHHHHTTCCEE-EESCHHHHHHHHGG
T ss_pred CCEEEEEeCCCc--------chhhhc-----------cccHHHHHHHHHcCCCEE-EeCCHHHHHHHHHH
Confidence 888888754321 000000 001235777777773222 24567777666654
No 201
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=20.94 E-value=4.7e+02 Score=23.68 Aligned_cols=71 Identities=7% Similarity=-0.001 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHc-----CCcc-EEEeccccHHHHHHHHHhCCCCCeeeecccCcc---cccHHHHHHHHHcCCEEEEec
Q 044053 152 RGVWEAMEESQML-----GLTK-SIGLSNFSCKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 152 ~~~~~~l~~l~~~-----Gkir-~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~ll~~~~~~gi~v~a~~ 222 (327)
.+-++.+.++.++ -.|. ..|=+.++...+.++++... ..++|+..+-. ..-.++..+|+++|+.++..+
T Consensus 282 ~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a--~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kko_A 282 PDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGS--CHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTC--CSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECC
T ss_pred cccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCC--CCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 4557777777765 3333 44556678889998887654 34777766543 222679999999999999876
Q ss_pred CC
Q 044053 223 PL 224 (327)
Q Consensus 223 pl 224 (327)
..
T Consensus 360 ~~ 361 (413)
T 1kko_A 360 TC 361 (413)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 202
>1g0y_I Antagonist peptide AF10847; immunoglobulin, immune system; 3.00A {Homo sapiens} SCOP: k.19.1.1
Probab=20.86 E-value=21 Score=18.33 Aligned_cols=6 Identities=83% Similarity=1.309 Sum_probs=4.6
Q ss_pred Ccccccc
Q 044053 317 PFKTLEE 323 (327)
Q Consensus 317 ~~~~~~~ 323 (327)
|| ||||
T Consensus 3 pf-twee 8 (26)
T 1g0y_I 3 PF-TWEE 8 (26)
T ss_dssp CC-CHHH
T ss_pred cc-ceec
Confidence 77 8876
No 203
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=20.83 E-value=2.1e+02 Score=27.17 Aligned_cols=135 Identities=14% Similarity=0.111 Sum_probs=72.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCCCC
Q 044053 66 TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPKED 145 (327)
Q Consensus 66 sE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~ 145 (327)
.|+.|-++|++..+.- +.+-|+|.|-.-.. -+-..++...++++. .+.++.+|.|.....
T Consensus 69 ~e~kL~~aI~~~~~~~---~P~~I~V~tTC~~e-----lIGdDi~~v~~~~~~-~~pVi~v~tpgf~g~----------- 128 (525)
T 3aek_B 69 TAILLKDALAAAHARY---KPQAMAVALTCTAE-----LLQDDPNGISRALNL-PVPVVPLELPSYSRK----------- 128 (525)
T ss_dssp HHHHHHHHHHHHHHHH---CCSEEEEEECTTGG-----GSCCCHHHHHHHHTC-SSCEEECCCCTTTCC-----------
T ss_pred cHHHHHHHHHHHHHhc---CCCEEEEECCcHHH-----HhcccHHHHHHHhcC-CCCEEEEECCCcCCc-----------
Confidence 5666666666544321 34457788775332 111122333333333 578999998865321
Q ss_pred CCCCCHHHHHHHHHHHHH----------cCCccEEEeccc------cHHHHHHHHHhCCCCCeeeecc------------
Q 044053 146 LLPMDYRGVWEAMEESQM----------LGLTKSIGLSNF------SCKKIETILTFATIPPSINQVE------------ 197 (327)
Q Consensus 146 ~~~~~~~~~~~~l~~l~~----------~Gkir~iGvS~~------~~~~l~~~~~~~~~~~~~~q~~------------ 197 (327)
.....-.++..+.+ .++|.-||..|. +..++.++++..++.+.+. ++
T Consensus 129 ----~~~G~~~al~alv~~~~~~~~~~~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~-~pgg~t~~ei~~~~ 203 (525)
T 3aek_B 129 ----ENYGADETFRALVRALAVPMERTPEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVC-APLGASPDDLRKLG 203 (525)
T ss_dssp ----HHHHHHHHHHHHHHHHCCCCCCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEE-EETTCCHHHHHTGG
T ss_pred ----hhHHHHHHHHHHHHHhccCccCCCCCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEE-eCCCCCHHHHHhhc
Confidence 12222233333332 246888998873 3567888888777654332 22
Q ss_pred ---cCccccc---HHHHHHH-HHcCCEEEEecCCC
Q 044053 198 ---MHPVWQQ---RKLIEFC-KAKGIIVTAYSPLG 225 (327)
Q Consensus 198 ---~~~~~~~---~~ll~~~-~~~gi~v~a~~pl~ 225 (327)
+|+.... ..+.++. ++.|+.++...|+|
T Consensus 204 ~A~~niv~~~~~g~~~A~~Le~r~GiP~i~~~PiG 238 (525)
T 3aek_B 204 QAHFNVLMYPETGESAARHLERACKQPFTKIVPIG 238 (525)
T ss_dssp GSSEEEECCHHHHHHHHHHHHHHSCCCBCCCCCCS
T ss_pred cCCEEEEEChhhHHHHHHHHHHHcCCCceecCCcC
Confidence 2222111 2234444 45699999887885
No 204
>2kqv_A Non-structural protein 3; severe acute respiratory syndrome (SARS), nonstructural PROT macrodomains, RNA-binding proteins, structural genomics; NMR {Sars coronavirus} PDB: 2kqw_A
Probab=20.50 E-value=3.3e+02 Score=21.80 Aligned_cols=126 Identities=11% Similarity=0.050 Sum_probs=57.3
Q ss_pred HHHHHHHHcCCccEEEeccccHHHHHHHHHh-C-CCCC----eeeecccCccccc---HHHHHHHHHcCCEEEEecCCCC
Q 044053 156 EAMEESQMLGLTKSIGLSNFSCKKIETILTF-A-TIPP----SINQVEMHPVWQQ---RKLIEFCKAKGIIVTAYSPLGA 226 (327)
Q Consensus 156 ~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~-~-~~~~----~~~q~~~~~~~~~---~~ll~~~~~~gi~v~a~~pl~~ 226 (327)
+.+...|+.|++-.|-+-+ ..+.+.++. + .+++ .-.-++|-.+..+ .+++..+...|-+++++ |||
T Consensus 13 ~ml~~ak~~g~~~~ic~D~---~A~~k~lk~~~kgv~~~egl~~~Gv~fY~Ys~k~Pl~~vi~~lNsl~~~i~~m-P~G- 87 (198)
T 2kqv_A 13 EMLAHAEETRKLMPICMDV---RAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM-PIG- 87 (198)
T ss_dssp HHHHHHHHSCCBCEEETTC---HHHHHHHHHHCCSCCCCSSBCCSSSCCEEECTTSCHHHHHHHHHHHCSCEEEC-CST-
T ss_pred HHHHHhhhcCeEEEEEecc---HHHHHHHhhhccCccccccceeCCEEEEEEecCChHHHHHHHhhcCCCCcEee-eee-
Confidence 5577899999998876543 333344443 1 1211 1133334344333 67889999989888876 884
Q ss_pred CCccCCCCcccChHHHHHHHHHcCCCHHHHHHHHHHhcCC---EEeecCCCHHHHHHhhcccccccCHHHHHHHhcCCCC
Q 044053 227 VGKIYGSNQVLENEALKEIAKAHGKTVAQVSLRWIVEQGA---TVVVKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQH 303 (327)
Q Consensus 227 ~G~l~~~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~~~~---~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~ 303 (327)
..+ ||.+++| +-++..+--+ +++++.......+..+.. .-+..|++.|..+..+
T Consensus 88 --yVt-----------------hGlnLae-s~~~mr~ltvP~v~~~~S~~~Vp~ynay~~s---a~~T~e~~Fi~~v~~n 144 (198)
T 2kqv_A 88 --YVT-----------------HGFNLEE-AARCMRSLKAPAVVSVSSPDAVTTYNGYLTS---SSKTSEEHFVETVSLA 144 (198)
T ss_dssp --TSS-----------------SCCCHHH-HHHHHTTCCSCEEEECSSTTHHHHHHHHHTC---C---------------
T ss_pred --eee-----------------cCccHHH-HhhhhhcccccEEEEecCcchhhhhhhhccc---ccCChHHHHHHHHHhc
Confidence 332 4677777 4455555542 333333333444333321 2334455666666555
Q ss_pred CccCCc
Q 044053 304 RLIPSD 309 (327)
Q Consensus 304 ~~~~~~ 309 (327)
..+..+
T Consensus 145 GsY~dW 150 (198)
T 2kqv_A 145 GSYRDW 150 (198)
T ss_dssp ------
T ss_pred CCccce
Confidence 544433
No 205
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=20.40 E-value=2.9e+02 Score=24.25 Aligned_cols=67 Identities=10% Similarity=0.091 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHcCCccEEEeccccHHHHHHHHHhCCCCCeeeecccCcccccHHHHHHHHHcCCEEEEec
Q 044053 151 YRGVWEAMEESQMLGLTKSIGLSNFSCKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 222 (327)
Q Consensus 151 ~~~~~~~l~~l~~~Gkir~iGvS~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~ 222 (327)
...+...++.+++.-.+ -|.|-++.++.++.+++.+. ..+|=+ +-...+.++++.++++|.+++.+.
T Consensus 70 ~~Rv~pvI~~l~~~~~v-piSIDT~~~~Va~aAl~aGa--~iINDV--sg~~~d~~m~~v~a~~~~~vvlmh 136 (314)
T 2vef_A 70 IQRVVPVIKAIRKESDV-LISIDTWKSQVAEAALAAGA--DLVNDI--TGLMGDEKMPHVVAEARAQVVIMF 136 (314)
T ss_dssp HHHHHHHHHHHHHHCCC-EEEEECSCHHHHHHHHHTTC--CEEEET--TTTCSCTTHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHhhCCc-eEEEeCCCHHHHHHHHHcCC--CEEEEC--CCCCCChHHHHHHHHcCCCEEEEe
Confidence 44456666677765222 48889999999999999742 345533 333334689999999999999874
No 206
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=20.40 E-value=4.5e+02 Score=24.34 Aligned_cols=67 Identities=12% Similarity=0.113 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHc-CCccEEEeccccHHHHHHHHHhCC-CCCeeeecccCcccccHHHHHHHHHcCCEEEEecC
Q 044053 151 YRGVWEAMEESQML-GLTKSIGLSNFSCKKIETILTFAT-IPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 223 (327)
Q Consensus 151 ~~~~~~~l~~l~~~-Gkir~iGvS~~~~~~l~~~~~~~~-~~~~~~q~~~~~~~~~~~ll~~~~~~gi~v~a~~p 223 (327)
.+.+...++..++. +.- +.+. +++..++++++.+. -+|.++-+.-. +-+++.+.++++|..+++.++
T Consensus 140 pe~~~~~Vk~V~e~~dvP--lsID-~dp~vleaale~~~d~~pLIns~t~e---n~~~~~~la~~y~~~vV~~~~ 208 (445)
T 2h9a_A 140 AATFAKAVATAREVTDLP--FILI-GTPEQLAAALETEGANNPLLYAATAD---NYEQMVELAKKYNVPLTVSAK 208 (445)
T ss_dssp HHHHHHHHHHHHHHCCSC--EEEE-SCHHHHHHHHHHHGGGCCEEEEECTT---THHHHHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHHHHHhcCCC--EEEE-CCHHHHHHHHHhcCCCCCEEEECCHH---HHHHHHHHHHHhCCeEEEEcC
Confidence 55555666666654 433 4444 99999999998864 56666644433 117889999999999988554
No 207
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=20.24 E-value=61 Score=23.42 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCCEEEEecCCCCCCcc--CCCCcccChHHHHHHHHHcCCCHHHHHHHHHHh
Q 044053 205 RKLIEFCKAKGIIVTAYSPLGAVGKI--YGSNQVLENEALKEIAKAHGKTVAQVSLRWIVE 263 (327)
Q Consensus 205 ~~ll~~~~~~gi~v~a~~pl~~~G~l--~~~~~~~~~~~l~~ia~~~~~s~aq~al~w~l~ 263 (327)
..+++.|+++||.++-..||+. -+. ..-......+-+..+|+ .|+|+.+
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr-~Ly~~~~ig~~IP~ely~aVAe---------iLa~v~~ 80 (98)
T 3c01_E 30 LAVRAYAEKVGVPVIVDIKLAR-SLFKTHRRYDLVSLEEIDEVLR---------LLVWLEE 80 (98)
T ss_dssp HHHHHHHHHHTCCEEECHHHHH-HHHHHCCTTCBCCHHHHHHHHH---------HHHHHHH
T ss_pred HHHHHHHHHcCCCeecCHHHHH-HHHHhCCCCCccCHHHHHHHHH---------HHHHHHH
Confidence 5789999999999999999975 333 12223334455555554 5777765
No 208
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=20.16 E-value=5.6e+02 Score=24.23 Aligned_cols=143 Identities=10% Similarity=0.033 Sum_probs=76.4
Q ss_pred cCCHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHHhCCCceeEEEeecCCCCCCCCCCCCCCC
Q 044053 64 YGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHLPISSKPGEVGFPVPK 143 (327)
Q Consensus 64 YgsE~~lG~~L~~~~~~g~~~~R~~v~I~tK~~~~~~~~~~i~~~le~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~ 143 (327)
||.|+.|-++|++..+.- +.+-++|.|-.-..-. -+.+..-+++.-++++ +.++.+|.|......
T Consensus 116 fGg~~kL~~aI~~~~~~~---~P~~I~V~tTC~~eiI-GdDi~~v~~~~~~~~~---~pVi~v~tpGf~g~s-------- 180 (533)
T 1mio_A 116 FGGVNKLKDAIHEAYEMF---HPAAIGVYATCPVGLI-GDDILAVAATASKEIG---IPVHAFSCEGYKGVS-------- 180 (533)
T ss_dssp HTTHHHHHHHHHHHHHHT---CCSEEEECCCHHHHHH-TCCHHHHHHHHHHHHS---SCEEECCCCTTSSSS--------
T ss_pred cCcHHHHHHHHHHHHHhc---CCCEEEEEcCCHHHHh-cCCHHHHHHHHHHhhC---CcEEEEeCCCCcCcc--------
Confidence 456666777777654432 3455677776522100 1234444444444454 789999988653210
Q ss_pred CCCCCCCHHHHHHHHHH-HHH-------cCCccEEEecccc--HHHHHHHHHhCCCCCeeeecc---------------c
Q 044053 144 EDLLPMDYRGVWEAMEE-SQM-------LGLTKSIGLSNFS--CKKIETILTFATIPPSINQVE---------------M 198 (327)
Q Consensus 144 ~~~~~~~~~~~~~~l~~-l~~-------~Gkir~iGvS~~~--~~~l~~~~~~~~~~~~~~q~~---------------~ 198 (327)
.....+.+.++|-+ +.. .++|.-||-.|+. .+++.++++..++.+.+. +. +
T Consensus 181 ---~~~G~~~a~~al~~~~~~~~~~~~~~~~VNIlG~~~~~gD~~eikrlL~~~Gi~v~~~-~~gg~t~~ei~~~~~A~~ 256 (533)
T 1mio_A 181 ---QSAGHHIANNTVMTDIIGKGNKEQKKYSINVLGEYNIGGDAWEMDRVLEKIGYHVNAT-LTGDATYEKVQNADKADL 256 (533)
T ss_dssp ---THHHHHHHHHHHHHHTTBCCCCCCCTTEEEEEEECCBTSHHHHHHHHHHHHTCEEEEE-EETTCCHHHHHBTTSCSE
T ss_pred ---hhHHHHHHHHHHHHHhcccccCCCCCCeEEEEcCCCChhhHHHHHHHHHHCCCeEEEE-eCCCCCHHHHHhhhcCCE
Confidence 00113334444333 221 3457888876664 578888888877653321 11 2
Q ss_pred Cccccc---HHHHHHHH-HcCCEEEEecCCC
Q 044053 199 HPVWQQ---RKLIEFCK-AKGIIVTAYSPLG 225 (327)
Q Consensus 199 ~~~~~~---~~ll~~~~-~~gi~v~a~~pl~ 225 (327)
|+.... ..+.++.+ +.|+.++...|+|
T Consensus 257 niv~~~~~~~~~A~~Leer~GiP~i~~~piG 287 (533)
T 1mio_A 257 NLVQCHRSINYIAEMMETKYGIPWIKCNFIG 287 (533)
T ss_dssp EEESCHHHHHHHHHHHHHHHCCCEEECCCSS
T ss_pred EEEECHHHHHHHHHHHHHHhCCCeEEecCCC
Confidence 222111 23344443 4599999988775
Done!