Query 044056
Match_columns 189
No_of_seqs 202 out of 1384
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 19:15:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044056.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044056hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 2.2E-35 7.7E-40 249.5 15.9 158 14-178 26-208 (345)
2 3kb6_A D-lactate dehydrogenase 100.0 7.8E-36 2.7E-40 251.6 12.3 157 17-178 1-176 (334)
3 3hg7_A D-isomer specific 2-hyd 100.0 1.7E-35 5.9E-40 248.3 13.1 160 13-180 2-177 (324)
4 2pi1_A D-lactate dehydrogenase 100.0 4.5E-35 1.5E-39 246.9 13.1 158 17-179 1-177 (334)
5 3k5p_A D-3-phosphoglycerate de 100.0 1.4E-34 4.8E-39 249.3 15.8 158 14-178 13-191 (416)
6 4e5n_A Thermostable phosphite 100.0 1.8E-34 6.2E-39 242.9 16.0 155 16-177 2-179 (330)
7 4dgs_A Dehydrogenase; structur 100.0 1.2E-34 4.2E-39 244.6 15.0 161 14-181 28-209 (340)
8 3evt_A Phosphoglycerate dehydr 100.0 5.3E-35 1.8E-39 245.5 11.0 157 16-180 1-174 (324)
9 1sc6_A PGDH, D-3-phosphoglycer 100.0 5E-34 1.7E-38 245.9 16.0 158 15-179 3-181 (404)
10 2yq5_A D-isomer specific 2-hyd 100.0 2E-34 6.9E-39 243.5 11.5 158 16-178 1-183 (343)
11 1j4a_A D-LDH, D-lactate dehydr 100.0 1.7E-33 5.7E-38 237.3 14.2 159 16-178 1-181 (333)
12 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 2.8E-33 9.4E-38 236.1 14.2 157 14-178 24-200 (335)
13 1wwk_A Phosphoglycerate dehydr 100.0 5E-33 1.7E-37 232.1 15.3 155 16-178 3-177 (307)
14 4hy3_A Phosphoglycerate oxidor 100.0 4.5E-33 1.6E-37 236.8 15.2 161 15-178 26-211 (365)
15 1gdh_A D-glycerate dehydrogena 100.0 1.9E-32 6.5E-37 229.7 15.7 156 16-178 1-182 (320)
16 3ba1_A HPPR, hydroxyphenylpyru 100.0 1.4E-32 4.7E-37 231.7 14.5 163 12-181 19-202 (333)
17 1dxy_A D-2-hydroxyisocaproate 100.0 1.6E-32 5.4E-37 231.4 14.9 158 17-179 1-181 (333)
18 2cuk_A Glycerate dehydrogenase 100.0 2.5E-32 8.4E-37 228.3 15.9 156 17-179 1-180 (311)
19 2ekl_A D-3-phosphoglycerate de 100.0 3.2E-32 1.1E-36 227.7 16.4 155 16-178 5-177 (313)
20 3pp8_A Glyoxylate/hydroxypyruv 100.0 2.1E-32 7.1E-37 229.0 14.7 157 17-182 4-178 (315)
21 3oet_A Erythronate-4-phosphate 100.0 1.6E-32 5.6E-37 234.1 13.4 150 15-177 2-153 (381)
22 3jtm_A Formate dehydrogenase, 100.0 7.4E-32 2.5E-36 228.5 16.6 125 51-178 55-199 (351)
23 3gg9_A D-3-phosphoglycerate de 100.0 8.7E-32 3E-36 228.2 15.8 156 17-177 3-194 (352)
24 1xdw_A NAD+-dependent (R)-2-hy 100.0 7.6E-32 2.6E-36 227.0 15.0 158 17-179 1-182 (331)
25 1ygy_A PGDH, D-3-phosphoglycer 100.0 1.7E-31 5.7E-36 237.3 15.5 157 14-177 2-176 (529)
26 2nac_A NAD-dependent formate d 100.0 2.9E-31 9.8E-36 227.7 15.7 125 51-178 82-226 (393)
27 2w2k_A D-mandelate dehydrogena 100.0 5.4E-31 1.9E-35 223.2 16.6 160 15-178 2-199 (348)
28 2gcg_A Glyoxylate reductase/hy 100.0 3.5E-31 1.2E-35 222.9 15.3 156 15-177 7-189 (330)
29 1mx3_A CTBP1, C-terminal bindi 100.0 3.7E-31 1.3E-35 224.0 14.8 159 14-178 19-203 (347)
30 2dbq_A Glyoxylate reductase; D 100.0 5.2E-31 1.8E-35 222.2 15.3 156 16-178 2-185 (334)
31 2d0i_A Dehydrogenase; structur 100.0 3.5E-31 1.2E-35 223.1 13.8 155 17-178 3-181 (333)
32 2j6i_A Formate dehydrogenase; 100.0 1.5E-30 5.3E-35 221.6 12.3 156 16-178 17-200 (364)
33 2o4c_A Erythronate-4-phosphate 100.0 4.9E-30 1.7E-34 219.1 13.6 148 17-177 1-150 (380)
34 1qp8_A Formate dehydrogenase; 100.0 1.1E-29 3.7E-34 211.5 10.8 144 17-177 1-158 (303)
35 3gvx_A Glycerate dehydrogenase 100.0 1.7E-28 5.7E-33 203.1 11.6 146 18-181 2-160 (290)
36 3d4o_A Dipicolinate synthase s 99.9 4.9E-24 1.7E-28 176.3 12.0 150 14-178 3-190 (293)
37 2rir_A Dipicolinate synthase, 99.8 1.5E-20 5E-25 155.8 10.9 153 12-178 3-192 (300)
38 3d64_A Adenosylhomocysteinase; 99.5 1.6E-15 5.3E-20 133.2 4.0 96 77-178 212-312 (494)
39 1v8b_A Adenosylhomocysteinase; 99.5 1.2E-15 4.2E-20 133.4 -0.1 96 77-178 192-292 (479)
40 2vhw_A Alanine dehydrogenase; 99.4 3.9E-13 1.3E-17 114.6 9.6 119 55-178 64-203 (377)
41 1x13_A NAD(P) transhydrogenase 99.2 6.6E-11 2.3E-15 101.6 11.7 121 58-178 72-207 (401)
42 1l7d_A Nicotinamide nucleotide 99.2 1.3E-10 4.4E-15 99.2 10.7 123 54-178 63-207 (384)
43 3ce6_A Adenosylhomocysteinase; 99.1 1.4E-11 4.7E-16 108.3 1.0 95 78-178 210-309 (494)
44 2eez_A Alanine dehydrogenase; 99.0 3E-09 1E-13 90.2 13.3 118 55-177 63-200 (369)
45 3h9u_A Adenosylhomocysteinase; 98.9 3.8E-10 1.3E-14 97.5 3.9 91 84-177 154-245 (436)
46 1gpj_A Glutamyl-tRNA reductase 98.9 5.9E-11 2E-15 101.9 -3.3 98 77-178 80-203 (404)
47 3n58_A Adenosylhomocysteinase; 98.7 5.1E-09 1.7E-13 90.6 3.9 86 84-176 190-280 (464)
48 3gvp_A Adenosylhomocysteinase 98.7 9.7E-09 3.3E-13 88.5 3.9 71 99-176 179-253 (435)
49 1gtm_A Glutamate dehydrogenase 98.6 9.3E-08 3.2E-12 82.4 7.7 58 114-175 186-245 (419)
50 1c1d_A L-phenylalanine dehydro 98.4 6.2E-07 2.1E-11 75.7 7.6 93 80-176 112-208 (355)
51 3ond_A Adenosylhomocysteinase; 98.1 1.4E-06 4.9E-11 76.2 4.0 86 84-176 208-298 (488)
52 3p2y_A Alanine dehydrogenase/p 98.1 1E-05 3.5E-10 68.8 8.1 119 59-178 85-219 (381)
53 2d5c_A AROE, shikimate 5-dehyd 98.1 1.6E-06 5.4E-11 69.8 2.8 97 59-177 54-150 (263)
54 1leh_A Leucine dehydrogenase; 98.0 6.5E-06 2.2E-10 69.7 5.2 95 80-177 109-207 (364)
55 4dio_A NAD(P) transhydrogenase 98.0 2.1E-05 7.2E-10 67.4 8.2 122 56-178 88-225 (405)
56 1pjc_A Protein (L-alanine dehy 98.0 7.2E-05 2.5E-09 62.9 11.4 119 58-177 66-201 (361)
57 3dtt_A NADP oxidoreductase; st 97.8 1.7E-05 5.8E-10 63.1 4.6 43 136-178 12-54 (245)
58 2hk9_A Shikimate dehydrogenase 97.7 8.5E-06 2.9E-10 66.1 1.8 99 58-177 65-163 (275)
59 2raf_A Putative dinucleotide-b 97.7 4.2E-05 1.4E-09 59.5 4.9 41 137-177 13-53 (209)
60 1np3_A Ketol-acid reductoisome 97.6 2.6E-05 8.9E-10 65.1 2.9 40 139-178 12-51 (338)
61 3oj0_A Glutr, glutamyl-tRNA re 97.6 4.8E-05 1.6E-09 55.3 3.9 36 143-178 21-56 (144)
62 2g1u_A Hypothetical protein TM 97.6 6.7E-05 2.3E-09 55.3 4.7 42 137-178 13-54 (155)
63 2yjz_A Metalloreductase steap4 96.7 1.3E-05 4.5E-10 62.2 0.0 37 141-177 17-53 (201)
64 3doj_A AT3G25530, dehydrogenas 97.4 0.00012 3.9E-09 60.2 4.6 42 138-179 16-57 (310)
65 3qha_A Putative oxidoreductase 97.4 0.00012 4.1E-09 59.7 4.3 38 143-180 15-52 (296)
66 3ggo_A Prephenate dehydrogenas 97.4 0.00018 6.3E-09 59.4 5.1 38 140-177 30-69 (314)
67 3q2o_A Phosphoribosylaminoimid 97.4 0.00021 7.1E-09 60.3 5.5 40 138-177 9-48 (389)
68 4dll_A 2-hydroxy-3-oxopropiona 97.3 0.00018 6E-09 59.4 4.4 39 140-178 28-66 (320)
69 3c85_A Putative glutathione-re 97.3 0.00013 4.6E-09 54.9 3.4 39 139-177 35-74 (183)
70 2hmt_A YUAA protein; RCK, KTN, 97.3 0.00015 5.1E-09 51.8 3.1 38 140-177 3-40 (144)
71 4e21_A 6-phosphogluconate dehy 97.3 0.00023 8E-09 59.9 4.7 38 141-178 20-57 (358)
72 3fr7_A Putative ketol-acid red 97.2 0.00022 7.6E-09 62.4 4.3 37 139-175 49-92 (525)
73 3llv_A Exopolyphosphatase-rela 97.2 0.00022 7.5E-09 51.3 3.7 37 141-177 4-40 (141)
74 1lss_A TRK system potassium up 97.2 0.00033 1.1E-08 49.7 4.5 35 143-177 4-38 (140)
75 3fwz_A Inner membrane protein 97.2 0.00025 8.7E-09 51.3 3.8 36 143-178 7-42 (140)
76 4ezb_A Uncharacterized conserv 97.2 0.00026 9E-09 58.4 4.2 34 143-176 24-58 (317)
77 2pv7_A T-protein [includes: ch 97.2 0.00031 1.1E-08 57.3 4.3 36 142-177 20-56 (298)
78 3ic5_A Putative saccharopine d 97.1 0.00038 1.3E-08 47.9 4.1 37 142-178 4-41 (118)
79 2vns_A Metalloreductase steap3 97.1 0.00032 1.1E-08 54.6 3.6 36 142-177 27-62 (215)
80 2uyy_A N-PAC protein; long-cha 97.0 0.00037 1.3E-08 57.0 3.3 35 144-178 31-65 (316)
81 1y81_A Conserved hypothetical 97.0 0.00084 2.9E-08 48.9 4.8 48 140-187 11-62 (138)
82 3qsg_A NAD-binding phosphogluc 97.0 0.00051 1.7E-08 56.5 3.8 35 142-176 23-58 (312)
83 4huj_A Uncharacterized protein 96.8 0.00043 1.5E-08 54.0 2.2 36 144-179 24-60 (220)
84 1nyt_A Shikimate 5-dehydrogena 96.8 0.0014 4.9E-08 52.7 5.2 39 139-177 115-153 (271)
85 2egg_A AROE, shikimate 5-dehyd 96.8 0.0017 5.8E-08 53.2 5.6 39 139-177 137-176 (297)
86 2zyd_A 6-phosphogluconate dehy 96.8 0.00089 3E-08 58.5 3.9 40 139-178 11-50 (480)
87 1f0y_A HCDH, L-3-hydroxyacyl-C 96.7 0.0016 5.6E-08 52.9 4.6 35 144-178 16-50 (302)
88 3don_A Shikimate dehydrogenase 96.7 0.001 3.5E-08 54.1 3.3 42 138-179 112-154 (277)
89 2duw_A Putative COA-binding pr 96.6 0.0012 4E-08 48.5 3.0 45 143-187 13-63 (145)
90 3o8q_A Shikimate 5-dehydrogena 96.4 0.0043 1.5E-07 50.4 5.5 41 138-178 121-162 (281)
91 1nvt_A Shikimate 5'-dehydrogen 96.3 0.0051 1.7E-07 49.8 5.5 38 139-177 124-161 (287)
92 1p77_A Shikimate 5-dehydrogena 96.3 0.0029 1E-07 50.9 4.1 40 138-177 114-153 (272)
93 3phh_A Shikimate dehydrogenase 96.3 0.0045 1.5E-07 50.1 5.1 37 143-179 118-154 (269)
94 2izz_A Pyrroline-5-carboxylate 96.3 0.0026 8.8E-08 52.4 3.7 36 142-177 21-60 (322)
95 3aog_A Glutamate dehydrogenase 96.3 0.0097 3.3E-07 51.4 7.3 54 116-173 212-265 (440)
96 1edz_A 5,10-methylenetetrahydr 96.2 0.0058 2E-07 50.7 5.3 39 137-175 171-210 (320)
97 3k6j_A Protein F01G10.3, confi 96.2 0.0061 2.1E-07 53.0 5.6 64 114-177 15-88 (460)
98 3pid_A UDP-glucose 6-dehydroge 96.2 0.0054 1.8E-07 52.9 5.2 41 137-178 30-70 (432)
99 1v9l_A Glutamate dehydrogenase 96.2 0.0096 3.3E-07 51.1 6.7 54 116-173 187-240 (421)
100 3tnl_A Shikimate dehydrogenase 96.2 0.0058 2E-07 50.5 5.1 39 138-176 149-188 (315)
101 3pwz_A Shikimate dehydrogenase 96.2 0.0064 2.2E-07 49.2 5.3 42 137-178 114-156 (272)
102 1evy_A Glycerol-3-phosphate de 96.2 0.0041 1.4E-07 51.8 4.3 33 145-177 17-49 (366)
103 2yfq_A Padgh, NAD-GDH, NAD-spe 96.2 0.0098 3.4E-07 51.1 6.6 55 115-173 188-242 (421)
104 3aoe_E Glutamate dehydrogenase 96.1 0.012 4.1E-07 50.5 7.0 56 115-174 194-250 (419)
105 4fcc_A Glutamate dehydrogenase 96.1 0.015 5E-07 50.3 7.4 54 116-173 212-265 (450)
106 3e8x_A Putative NAD-dependent 96.0 0.0053 1.8E-07 47.5 4.1 43 136-178 14-57 (236)
107 4e4t_A Phosphoribosylaminoimid 96.0 0.0076 2.6E-07 51.5 5.3 38 140-177 32-69 (419)
108 3k92_A NAD-GDH, NAD-specific g 96.0 0.01 3.5E-07 51.0 6.0 55 115-173 197-251 (424)
109 3jyo_A Quinate/shikimate dehyd 96.0 0.0086 2.9E-07 48.7 5.2 40 139-178 123-163 (283)
110 1iuk_A Hypothetical protein TT 96.0 0.0065 2.2E-07 44.2 4.0 45 143-187 13-63 (140)
111 1yqd_A Sinapyl alcohol dehydro 95.9 0.006 2E-07 50.9 4.3 37 142-178 187-223 (366)
112 2i99_A MU-crystallin homolog; 95.9 0.0064 2.2E-07 49.9 4.3 38 141-178 133-172 (312)
113 2d59_A Hypothetical protein PH 95.9 0.0087 3E-07 43.6 4.6 45 143-187 22-70 (144)
114 3two_A Mannitol dehydrogenase; 95.9 0.0087 3E-07 49.4 5.1 40 141-180 175-214 (348)
115 3dfz_A SIRC, precorrin-2 dehyd 95.9 0.0065 2.2E-07 47.8 4.1 42 136-177 24-65 (223)
116 1z82_A Glycerol-3-phosphate de 95.9 0.0068 2.3E-07 49.9 4.4 37 142-178 13-49 (335)
117 2tmg_A Protein (glutamate dehy 95.9 0.022 7.6E-07 48.8 7.7 55 115-173 185-240 (415)
118 1zcj_A Peroxisomal bifunctiona 95.9 0.0083 2.8E-07 52.0 4.9 35 143-177 37-71 (463)
119 3fbt_A Chorismate mutase and s 95.8 0.0087 3E-07 48.7 4.6 41 138-178 117-158 (282)
120 2cdc_A Glucose dehydrogenase g 95.8 0.006 2.1E-07 50.8 3.7 37 140-176 178-214 (366)
121 3t4e_A Quinate/shikimate dehyd 95.8 0.011 3.7E-07 48.8 5.2 39 138-176 143-182 (312)
122 3u62_A Shikimate dehydrogenase 95.8 0.0074 2.5E-07 48.3 3.9 38 140-178 106-144 (253)
123 1jw9_B Molybdopterin biosynthe 95.7 0.0056 1.9E-07 48.7 3.0 38 139-176 27-65 (249)
124 2z2v_A Hypothetical protein PH 95.7 0.012 4.2E-07 49.4 5.2 40 138-178 11-50 (365)
125 1piw_A Hypothetical zinc-type 95.7 0.0088 3E-07 49.7 4.3 38 142-179 179-216 (360)
126 3k96_A Glycerol-3-phosphate de 95.7 0.0087 3E-07 50.1 4.1 35 143-177 29-63 (356)
127 1yj8_A Glycerol-3-phosphate de 95.7 0.0047 1.6E-07 51.8 2.5 34 144-177 22-62 (375)
128 2bma_A Glutamate dehydrogenase 95.5 0.024 8.2E-07 49.3 6.2 53 116-172 229-281 (470)
129 2c2x_A Methylenetetrahydrofola 95.4 0.043 1.5E-06 44.6 7.3 57 114-178 137-196 (281)
130 1uuf_A YAHK, zinc-type alcohol 95.4 0.012 4.2E-07 49.1 4.2 37 142-178 194-230 (369)
131 3g79_A NDP-N-acetyl-D-galactos 95.4 0.013 4.4E-07 51.2 4.4 34 144-177 19-54 (478)
132 1lu9_A Methylene tetrahydromet 95.4 0.02 6.7E-07 46.2 5.1 40 138-177 114-154 (287)
133 1b0a_A Protein (fold bifunctio 95.4 0.058 2E-06 44.0 7.9 42 137-178 153-195 (288)
134 3mw9_A GDH 1, glutamate dehydr 95.3 0.016 5.5E-07 50.7 4.7 58 116-173 213-274 (501)
135 3p2o_A Bifunctional protein fo 95.3 0.017 5.7E-07 47.1 4.4 42 137-178 154-196 (285)
136 2pzm_A Putative nucleotide sug 95.3 0.032 1.1E-06 45.3 6.1 43 136-178 13-56 (330)
137 1bgv_A Glutamate dehydrogenase 95.2 0.031 1E-06 48.4 6.2 52 116-171 207-258 (449)
138 3r3j_A Glutamate dehydrogenase 95.2 0.025 8.4E-07 49.0 5.5 55 116-174 216-271 (456)
139 1e3i_A Alcohol dehydrogenase, 95.2 0.017 5.9E-07 48.1 4.4 37 142-178 195-232 (376)
140 1pqw_A Polyketide synthase; ro 95.2 0.011 3.9E-07 44.5 3.0 36 142-177 38-74 (198)
141 2cf5_A Atccad5, CAD, cinnamyl 95.2 0.017 5.8E-07 48.0 4.2 37 142-178 180-216 (357)
142 1cdo_A Alcohol dehydrogenase; 95.1 0.019 6.3E-07 47.9 4.4 37 142-178 192-229 (374)
143 1a4i_A Methylenetetrahydrofola 95.1 0.021 7.1E-07 46.9 4.5 42 137-178 159-201 (301)
144 2jhf_A Alcohol dehydrogenase E 95.1 0.019 6.4E-07 47.9 4.4 37 142-178 191-228 (374)
145 3l07_A Bifunctional protein fo 95.1 0.021 7.3E-07 46.5 4.4 41 137-177 155-196 (285)
146 1e3j_A NADP(H)-dependent ketos 95.1 0.023 7.8E-07 47.0 4.7 36 142-177 168-203 (352)
147 1pl8_A Human sorbitol dehydrog 95.0 0.024 8.2E-07 47.0 4.7 36 142-177 171-207 (356)
148 1rjw_A ADH-HT, alcohol dehydro 95.0 0.021 7.1E-07 47.0 4.3 36 142-177 164-199 (339)
149 3uog_A Alcohol dehydrogenase; 95.0 0.023 7.7E-07 47.3 4.5 36 142-177 189-224 (363)
150 3hwr_A 2-dehydropantoate 2-red 95.0 0.024 8.1E-07 46.4 4.6 36 140-176 16-51 (318)
151 4a26_A Putative C-1-tetrahydro 95.0 0.03 1E-06 45.9 5.1 40 137-176 159-199 (300)
152 1p0f_A NADP-dependent alcohol 95.0 0.017 5.9E-07 48.1 3.7 37 142-178 191-228 (373)
153 1iz0_A Quinone oxidoreductase; 94.9 0.014 4.7E-07 47.2 3.0 37 142-178 125-162 (302)
154 2d8a_A PH0655, probable L-thre 94.9 0.02 6.7E-07 47.3 3.9 36 142-177 167-203 (348)
155 2fzw_A Alcohol dehydrogenase c 94.9 0.018 6.3E-07 47.9 3.7 37 142-178 190-227 (373)
156 4a5o_A Bifunctional protein fo 94.8 0.035 1.2E-06 45.2 5.1 41 137-177 155-196 (286)
157 3o38_A Short chain dehydrogena 94.8 0.025 8.6E-07 44.5 4.2 40 138-177 17-58 (266)
158 3s2e_A Zinc-containing alcohol 94.8 0.023 8E-07 46.6 4.1 37 141-177 165-201 (340)
159 3goh_A Alcohol dehydrogenase, 94.8 0.026 9E-07 45.8 4.4 37 141-178 141-177 (315)
160 2hcy_A Alcohol dehydrogenase 1 94.8 0.033 1.1E-06 45.9 5.0 37 142-178 169-206 (347)
161 2wtb_A MFP2, fatty acid multif 94.8 0.021 7.3E-07 52.2 4.1 34 144-177 313-346 (725)
162 3ngx_A Bifunctional protein fo 94.7 0.036 1.2E-06 44.9 4.8 37 141-177 148-185 (276)
163 1v3u_A Leukotriene B4 12- hydr 94.5 0.033 1.1E-06 45.5 4.4 35 142-176 145-180 (333)
164 2dq4_A L-threonine 3-dehydroge 94.5 0.027 9.3E-07 46.3 3.9 37 142-178 164-201 (343)
165 4id9_A Short-chain dehydrogena 94.5 0.028 9.6E-07 45.8 3.9 43 136-178 12-55 (347)
166 4eye_A Probable oxidoreductase 94.5 0.023 7.9E-07 46.8 3.4 38 141-178 158-196 (342)
167 2bka_A CC3, TAT-interacting pr 94.5 0.035 1.2E-06 42.8 4.3 39 141-179 16-57 (242)
168 3uko_A Alcohol dehydrogenase c 94.5 0.022 7.4E-07 47.6 3.1 38 142-179 193-231 (378)
169 2dph_A Formaldehyde dismutase; 94.5 0.03 1E-06 47.1 4.0 36 142-177 185-221 (398)
170 4b7c_A Probable oxidoreductase 94.4 0.029 1E-06 45.9 3.8 36 142-177 149-185 (336)
171 1wdk_A Fatty oxidation complex 94.4 0.019 6.5E-07 52.5 2.9 35 143-177 314-348 (715)
172 1kol_A Formaldehyde dehydrogen 94.4 0.04 1.4E-06 46.2 4.7 36 142-177 185-221 (398)
173 3gms_A Putative NADPH:quinone 94.4 0.026 9E-07 46.3 3.5 38 142-179 144-182 (340)
174 2h6e_A ADH-4, D-arabinose 1-de 94.4 0.033 1.1E-06 45.8 4.1 37 142-178 170-208 (344)
175 3rui_A Ubiquitin-like modifier 94.3 0.059 2E-06 45.0 5.5 61 116-176 5-68 (340)
176 3ip1_A Alcohol dehydrogenase, 94.3 0.044 1.5E-06 46.2 4.8 38 140-177 211-249 (404)
177 4gcm_A TRXR, thioredoxin reduc 94.3 0.065 2.2E-06 42.9 5.6 38 140-177 142-179 (312)
178 1zud_1 Adenylyltransferase THI 94.3 0.034 1.1E-06 44.2 3.8 38 139-176 24-62 (251)
179 2axq_A Saccharopine dehydrogen 94.3 0.027 9.1E-07 49.0 3.5 42 136-177 16-58 (467)
180 1o5i_A 3-oxoacyl-(acyl carrier 94.3 0.053 1.8E-06 42.5 4.9 41 136-176 12-53 (249)
181 3cps_A Glyceraldehyde 3-phosph 94.2 0.043 1.5E-06 46.0 4.4 31 144-174 18-49 (354)
182 2b5w_A Glucose dehydrogenase; 94.2 0.061 2.1E-06 44.5 5.4 37 141-177 171-210 (357)
183 2j3h_A NADP-dependent oxidored 94.2 0.036 1.2E-06 45.5 3.8 36 142-177 155-191 (345)
184 3fpc_A NADP-dependent alcohol 94.2 0.044 1.5E-06 45.2 4.4 36 142-177 166-202 (352)
185 3qvo_A NMRA family protein; st 94.2 0.047 1.6E-06 42.2 4.3 39 141-179 21-61 (236)
186 4ej6_A Putative zinc-binding d 94.1 0.053 1.8E-06 45.2 4.8 36 142-177 182-218 (370)
187 1h2b_A Alcohol dehydrogenase; 94.1 0.039 1.3E-06 45.7 4.0 36 142-177 186-222 (359)
188 3vtz_A Glucose 1-dehydrogenase 94.1 0.049 1.7E-06 43.3 4.4 43 137-179 8-51 (269)
189 4a5l_A Thioredoxin reductase; 94.1 0.09 3.1E-06 41.8 6.0 38 141-178 150-187 (314)
190 1f8f_A Benzyl alcohol dehydrog 94.1 0.041 1.4E-06 45.8 4.0 36 142-177 190-226 (371)
191 3fbg_A Putative arginate lyase 94.1 0.057 1.9E-06 44.5 4.8 36 142-177 150-186 (346)
192 2a9f_A Putative malic enzyme ( 94.1 0.089 3E-06 44.7 6.1 115 52-176 98-222 (398)
193 3m6i_A L-arabinitol 4-dehydrog 94.0 0.041 1.4E-06 45.6 3.9 36 142-177 179-215 (363)
194 1vl6_A Malate oxidoreductase; 94.0 0.069 2.4E-06 45.3 5.3 66 100-175 159-225 (388)
195 3k31_A Enoyl-(acyl-carrier-pro 94.0 0.067 2.3E-06 43.1 5.0 39 138-176 25-66 (296)
196 2q1w_A Putative nucleotide sug 94.0 0.065 2.2E-06 43.5 5.0 41 137-177 15-56 (333)
197 1vj0_A Alcohol dehydrogenase, 93.9 0.055 1.9E-06 45.2 4.6 37 142-178 195-232 (380)
198 3uxy_A Short-chain dehydrogena 93.9 0.056 1.9E-06 42.9 4.4 44 137-180 22-66 (266)
199 1yb5_A Quinone oxidoreductase; 93.9 0.058 2E-06 44.6 4.6 36 142-177 170-206 (351)
200 3hja_A GAPDH, glyceraldehyde-3 93.9 0.05 1.7E-06 45.6 4.1 32 143-174 21-52 (356)
201 1uzm_A 3-oxoacyl-[acyl-carrier 93.9 0.075 2.6E-06 41.5 5.0 42 138-179 10-52 (247)
202 3h8v_A Ubiquitin-like modifier 93.8 0.041 1.4E-06 44.9 3.5 40 137-176 30-70 (292)
203 3kvo_A Hydroxysteroid dehydrog 93.8 0.11 3.8E-06 43.0 6.2 42 137-178 39-81 (346)
204 3qwb_A Probable quinone oxidor 93.8 0.043 1.5E-06 44.9 3.6 37 141-177 147-184 (334)
205 1npy_A Hypothetical shikimate 93.8 0.043 1.5E-06 44.2 3.5 36 142-177 118-154 (271)
206 3k5i_A Phosphoribosyl-aminoimi 93.7 0.074 2.5E-06 45.0 5.0 35 141-176 22-56 (403)
207 3i1j_A Oxidoreductase, short c 93.6 0.08 2.7E-06 41.0 4.7 40 138-177 9-49 (247)
208 3vtf_A UDP-glucose 6-dehydroge 93.6 0.053 1.8E-06 46.9 3.9 37 142-178 20-56 (444)
209 4imr_A 3-oxoacyl-(acyl-carrier 93.5 0.046 1.6E-06 43.6 3.3 41 139-179 29-70 (275)
210 1vl8_A Gluconate 5-dehydrogena 93.5 0.092 3.2E-06 41.5 5.0 42 136-177 14-56 (267)
211 1xu9_A Corticosteroid 11-beta- 93.5 0.068 2.3E-06 42.6 4.2 40 138-177 23-63 (286)
212 3jyn_A Quinone oxidoreductase; 93.5 0.044 1.5E-06 44.7 3.1 36 142-177 140-176 (325)
213 3r1i_A Short-chain type dehydr 93.5 0.051 1.7E-06 43.4 3.4 40 139-178 28-68 (276)
214 3rkr_A Short chain oxidoreduct 93.5 0.071 2.4E-06 42.0 4.2 42 137-178 23-65 (262)
215 2we8_A Xanthine dehydrogenase; 93.4 0.07 2.4E-06 45.2 4.3 35 143-177 204-238 (386)
216 3nzo_A UDP-N-acetylglucosamine 93.4 0.066 2.2E-06 45.1 4.2 37 141-177 33-71 (399)
217 3ruf_A WBGU; rossmann fold, UD 93.4 0.083 2.9E-06 42.9 4.7 38 141-178 23-61 (351)
218 3slg_A PBGP3 protein; structur 93.4 0.081 2.8E-06 43.4 4.6 42 138-179 19-62 (372)
219 3ijr_A Oxidoreductase, short c 93.4 0.13 4.3E-06 41.3 5.7 40 138-177 42-82 (291)
220 2j8z_A Quinone oxidoreductase; 93.4 0.062 2.1E-06 44.4 3.9 36 142-177 162-198 (354)
221 2eih_A Alcohol dehydrogenase; 93.4 0.055 1.9E-06 44.5 3.5 36 142-177 166-202 (343)
222 2nm0_A Probable 3-oxacyl-(acyl 93.4 0.12 4E-06 40.7 5.3 43 136-178 14-57 (253)
223 3nrc_A Enoyl-[acyl-carrier-pro 93.4 0.079 2.7E-06 42.2 4.4 39 138-176 21-62 (280)
224 4dup_A Quinone oxidoreductase; 93.3 0.062 2.1E-06 44.4 3.8 36 142-177 167-203 (353)
225 1yb1_A 17-beta-hydroxysteroid 93.3 0.12 3.9E-06 40.9 5.3 40 138-177 26-66 (272)
226 2vt3_A REX, redox-sensing tran 93.3 0.056 1.9E-06 42.1 3.3 36 144-179 86-124 (215)
227 3rd5_A Mypaa.01249.C; ssgcid, 93.3 0.11 3.7E-06 41.6 5.0 42 137-178 10-52 (291)
228 2c0c_A Zinc binding alcohol de 93.2 0.046 1.6E-06 45.4 2.9 35 142-176 163-198 (362)
229 1qor_A Quinone oxidoreductase; 93.2 0.047 1.6E-06 44.5 2.9 35 142-176 140-175 (327)
230 1h5q_A NADP-dependent mannitol 93.2 0.086 3E-06 41.1 4.4 40 139-178 10-50 (265)
231 4gsl_A Ubiquitin-like modifier 93.2 0.12 4E-06 46.4 5.6 61 116-176 297-360 (615)
232 3orf_A Dihydropteridine reduct 93.2 0.12 4.3E-06 40.3 5.2 42 139-180 18-60 (251)
233 1jvb_A NAD(H)-dependent alcoho 93.2 0.072 2.5E-06 43.8 4.0 36 142-177 170-207 (347)
234 2b69_A UDP-glucuronate decarbo 93.1 0.11 3.9E-06 42.1 5.1 40 138-177 22-62 (343)
235 2hjr_A Malate dehydrogenase; m 93.1 0.1 3.5E-06 43.1 4.8 38 143-180 14-52 (328)
236 2p91_A Enoyl-[acyl-carrier-pro 93.1 0.076 2.6E-06 42.3 3.9 37 140-176 18-57 (285)
237 1xg5_A ARPG836; short chain de 93.1 0.13 4.3E-06 40.8 5.2 39 138-176 27-66 (279)
238 3ek2_A Enoyl-(acyl-carrier-pro 93.1 0.087 3E-06 41.2 4.2 40 137-176 8-50 (271)
239 3rih_A Short chain dehydrogena 93.0 0.055 1.9E-06 43.7 2.9 42 137-178 35-77 (293)
240 2q1s_A Putative nucleotide sug 93.0 0.13 4.4E-06 42.5 5.3 40 139-178 28-69 (377)
241 2dt5_A AT-rich DNA-binding pro 92.9 0.068 2.3E-06 41.5 3.3 34 144-178 81-117 (211)
242 3ulk_A Ketol-acid reductoisome 92.9 0.089 3.1E-06 45.5 4.2 37 138-174 32-68 (491)
243 3tjr_A Short chain dehydrogena 92.9 0.13 4.6E-06 41.4 5.2 40 138-177 26-66 (301)
244 3un1_A Probable oxidoreductase 92.9 0.12 4E-06 40.8 4.7 41 139-179 24-65 (260)
245 2gn4_A FLAA1 protein, UDP-GLCN 92.9 0.089 3E-06 43.2 4.1 40 138-177 16-58 (344)
246 4hv4_A UDP-N-acetylmuramate--L 92.9 0.074 2.5E-06 46.3 3.8 35 143-177 22-57 (494)
247 3gdg_A Probable NADP-dependent 92.9 0.077 2.6E-06 41.6 3.6 40 139-178 16-58 (267)
248 4fgs_A Probable dehydrogenase 92.9 0.11 3.9E-06 41.8 4.6 41 137-177 23-64 (273)
249 3grk_A Enoyl-(acyl-carrier-pro 92.9 0.11 3.9E-06 41.7 4.6 39 138-176 26-67 (293)
250 3gwf_A Cyclohexanone monooxyge 92.8 0.16 5.4E-06 44.7 5.9 40 138-177 173-212 (540)
251 4fc7_A Peroxisomal 2,4-dienoyl 92.8 0.16 5.6E-06 40.2 5.5 40 138-177 22-62 (277)
252 3gem_A Short chain dehydrogena 92.8 0.07 2.4E-06 42.2 3.3 41 138-178 22-63 (260)
253 1xa0_A Putative NADPH dependen 92.8 0.055 1.9E-06 44.1 2.7 34 145-178 152-186 (328)
254 2zb4_A Prostaglandin reductase 92.8 0.079 2.7E-06 43.7 3.7 33 144-176 162-196 (357)
255 3v8b_A Putative dehydrogenase, 92.8 0.12 4.2E-06 41.3 4.7 41 137-177 22-63 (283)
256 4dyv_A Short-chain dehydrogena 92.8 0.082 2.8E-06 42.1 3.6 46 132-177 17-63 (272)
257 3t7c_A Carveol dehydrogenase; 92.7 0.16 5.3E-06 40.9 5.3 40 137-176 22-62 (299)
258 3f9i_A 3-oxoacyl-[acyl-carrier 92.7 0.11 3.7E-06 40.3 4.2 42 137-178 8-50 (249)
259 2b4q_A Rhamnolipids biosynthes 92.7 0.15 5E-06 40.6 5.1 39 139-177 25-64 (276)
260 1sb8_A WBPP; epimerase, 4-epim 92.7 0.1 3.5E-06 42.5 4.2 38 140-177 24-62 (352)
261 1w6u_A 2,4-dienoyl-COA reducta 92.6 0.16 5.5E-06 40.5 5.2 40 138-177 21-61 (302)
262 3ppi_A 3-hydroxyacyl-COA dehyd 92.6 0.12 4E-06 41.0 4.4 40 138-177 25-65 (281)
263 4dqx_A Probable oxidoreductase 92.6 0.16 5.3E-06 40.5 5.1 40 138-177 22-62 (277)
264 1wly_A CAAR, 2-haloacrylate re 92.6 0.072 2.5E-06 43.5 3.1 35 142-176 145-180 (333)
265 2vn8_A Reticulon-4-interacting 92.6 0.099 3.4E-06 43.5 4.0 34 141-174 182-216 (375)
266 3oec_A Carveol dehydrogenase ( 92.6 0.17 5.9E-06 41.1 5.4 40 138-177 41-81 (317)
267 1tt7_A YHFP; alcohol dehydroge 92.5 0.064 2.2E-06 43.7 2.7 34 145-178 153-187 (330)
268 2bgk_A Rhizome secoisolaricire 92.5 0.17 5.8E-06 39.7 5.1 40 138-177 11-51 (278)
269 3vh1_A Ubiquitin-like modifier 92.5 0.13 4.5E-06 46.0 4.8 60 116-175 298-360 (598)
270 2f00_A UDP-N-acetylmuramate--L 92.4 0.088 3E-06 45.7 3.6 35 143-177 19-54 (491)
271 3oh8_A Nucleoside-diphosphate 92.4 0.17 5.8E-06 44.0 5.5 37 143-179 147-184 (516)
272 2o7s_A DHQ-SDH PR, bifunctiona 92.4 0.055 1.9E-06 47.5 2.3 39 139-177 360-398 (523)
273 4da9_A Short-chain dehydrogena 92.4 0.2 6.9E-06 39.9 5.5 40 136-175 22-62 (280)
274 1sny_A Sniffer CG10964-PA; alp 92.4 0.15 5.1E-06 39.8 4.6 43 136-178 14-60 (267)
275 1omo_A Alanine dehydrogenase; 92.4 0.13 4.5E-06 42.2 4.5 37 142-178 124-162 (322)
276 4dry_A 3-oxoacyl-[acyl-carrier 92.3 0.094 3.2E-06 41.9 3.5 40 138-177 28-68 (281)
277 1gu7_A Enoyl-[acyl-carrier-pro 92.3 0.096 3.3E-06 43.2 3.6 37 142-178 166-204 (364)
278 1ae1_A Tropinone reductase-I; 92.3 0.17 5.8E-06 40.0 4.9 39 139-177 17-56 (273)
279 3p19_A BFPVVD8, putative blue 92.3 0.14 4.8E-06 40.6 4.4 40 138-177 11-51 (266)
280 3gaz_A Alcohol dehydrogenase s 92.3 0.13 4.4E-06 42.3 4.3 33 142-175 150-183 (343)
281 3pgx_A Carveol dehydrogenase; 92.2 0.28 9.6E-06 38.8 6.2 39 138-176 10-49 (280)
282 2c07_A 3-oxoacyl-(acyl-carrier 92.2 0.22 7.7E-06 39.5 5.6 39 138-176 39-78 (285)
283 3ctm_A Carbonyl reductase; alc 92.2 0.089 3E-06 41.6 3.2 39 140-178 31-70 (279)
284 3jv7_A ADH-A; dehydrogenase, n 92.2 0.12 4E-06 42.4 4.0 38 141-178 170-208 (345)
285 3ff4_A Uncharacterized protein 92.2 0.099 3.4E-06 37.0 3.1 44 144-187 5-52 (122)
286 4a0s_A Octenoyl-COA reductase/ 92.2 0.1 3.4E-06 44.5 3.7 37 140-176 218-255 (447)
287 3on5_A BH1974 protein; structu 92.1 0.064 2.2E-06 45.1 2.3 35 143-177 199-233 (362)
288 3ec7_A Putative dehydrogenase; 92.1 0.15 5.2E-06 42.2 4.7 36 143-178 23-61 (357)
289 1y8q_A Ubiquitin-like 1 activa 92.1 0.12 4E-06 43.1 3.9 40 137-176 30-70 (346)
290 4gx0_A TRKA domain protein; me 92.1 0.13 4.4E-06 45.3 4.4 36 144-179 349-384 (565)
291 4egf_A L-xylulose reductase; s 92.0 0.13 4.5E-06 40.6 4.0 40 138-177 15-55 (266)
292 3nx4_A Putative oxidoreductase 92.0 0.081 2.8E-06 42.9 2.8 35 143-178 148-183 (324)
293 2c5a_A GDP-mannose-3', 5'-epim 92.0 0.28 9.7E-06 40.5 6.2 39 140-178 26-65 (379)
294 3gvc_A Oxidoreductase, probabl 92.0 0.11 3.9E-06 41.4 3.6 39 139-177 25-64 (277)
295 2zat_A Dehydrogenase/reductase 92.0 0.15 5.1E-06 39.9 4.2 39 139-177 10-49 (260)
296 3nv9_A Malic enzyme; rossmann 92.0 0.24 8.1E-06 43.0 5.7 67 100-176 186-255 (487)
297 3uf0_A Short-chain dehydrogena 92.0 0.2 6.8E-06 39.8 5.0 38 138-175 26-64 (273)
298 3cxt_A Dehydrogenase with diff 91.9 0.19 6.5E-06 40.3 4.9 38 139-176 30-68 (291)
299 3h5n_A MCCB protein; ubiquitin 91.9 0.11 3.9E-06 43.3 3.6 39 138-176 113-152 (353)
300 2x6t_A ADP-L-glycero-D-manno-h 91.9 0.12 4E-06 42.2 3.7 40 139-178 42-83 (357)
301 3grp_A 3-oxoacyl-(acyl carrier 91.9 0.17 5.7E-06 40.1 4.5 41 137-177 21-62 (266)
302 4iin_A 3-ketoacyl-acyl carrier 91.9 0.14 4.9E-06 40.4 4.0 40 137-176 23-63 (271)
303 1p3d_A UDP-N-acetylmuramate--a 91.9 0.082 2.8E-06 45.6 2.8 35 143-177 18-53 (475)
304 2rhc_B Actinorhodin polyketide 91.9 0.2 6.9E-06 39.7 4.9 38 140-177 19-57 (277)
305 3v2h_A D-beta-hydroxybutyrate 91.9 0.21 7E-06 39.8 5.0 39 138-176 20-59 (281)
306 4ibo_A Gluconate dehydrogenase 91.8 0.12 4.3E-06 40.9 3.7 40 138-177 21-61 (271)
307 3tqh_A Quinone oxidoreductase; 91.8 0.13 4.5E-06 41.7 3.8 34 141-174 151-185 (321)
308 3ftp_A 3-oxoacyl-[acyl-carrier 91.8 0.15 5.2E-06 40.4 4.1 40 138-177 23-63 (270)
309 3uox_A Otemo; baeyer-villiger 91.8 0.23 8E-06 43.6 5.6 39 139-177 181-219 (545)
310 1lnq_A MTHK channels, potassiu 91.7 0.1 3.6E-06 42.7 3.1 35 143-178 115-149 (336)
311 3krt_A Crotonyl COA reductase; 91.6 0.13 4.3E-06 44.1 3.7 36 141-176 227-263 (456)
312 1yxm_A Pecra, peroxisomal tran 91.6 0.25 8.6E-06 39.4 5.2 40 137-176 12-52 (303)
313 3hdj_A Probable ornithine cycl 91.6 0.17 5.7E-06 41.6 4.2 34 142-175 120-155 (313)
314 2hrz_A AGR_C_4963P, nucleoside 91.6 0.14 4.8E-06 41.4 3.7 39 139-177 10-56 (342)
315 3keo_A Redox-sensing transcrip 91.4 0.09 3.1E-06 40.9 2.3 35 143-177 84-121 (212)
316 3hn7_A UDP-N-acetylmuramate-L- 91.3 0.2 7E-06 43.8 4.8 37 141-177 17-54 (524)
317 3r3s_A Oxidoreductase; structu 91.3 0.3 1E-05 39.1 5.4 39 138-176 44-83 (294)
318 3rc1_A Sugar 3-ketoreductase; 91.3 0.14 4.7E-06 42.3 3.4 34 143-176 27-63 (350)
319 1n7h_A GDP-D-mannose-4,6-dehyd 91.2 0.24 8.2E-06 40.8 4.9 35 144-178 29-64 (381)
320 3v2g_A 3-oxoacyl-[acyl-carrier 91.1 0.28 9.5E-06 38.9 5.0 38 139-176 27-65 (271)
321 3abi_A Putative uncharacterize 91.1 0.28 9.5E-06 40.7 5.2 37 140-177 13-49 (365)
322 4ap3_A Steroid monooxygenase; 91.1 0.17 5.8E-06 44.6 4.0 40 138-177 186-225 (549)
323 4egb_A DTDP-glucose 4,6-dehydr 91.1 0.2 6.8E-06 40.6 4.2 37 140-176 21-60 (346)
324 3pi7_A NADH oxidoreductase; gr 91.1 0.11 3.7E-06 42.7 2.6 36 143-178 165-201 (349)
325 3nkl_A UDP-D-quinovosamine 4-d 91.0 0.19 6.6E-06 35.5 3.6 31 142-172 3-34 (141)
326 3iup_A Putative NADPH:quinone 91.0 0.1 3.5E-06 43.6 2.4 37 141-177 169-207 (379)
327 4ew6_A D-galactose-1-dehydroge 91.0 0.21 7.3E-06 40.9 4.3 35 143-177 25-62 (330)
328 3sju_A Keto reductase; short-c 91.0 0.24 8.1E-06 39.4 4.5 40 138-177 19-59 (279)
329 4gx0_A TRKA domain protein; me 90.9 0.55 1.9E-05 41.2 7.1 39 140-178 124-162 (565)
330 1ja9_A 4HNR, 1,3,6,8-tetrahydr 90.9 0.19 6.5E-06 39.3 3.8 37 139-175 17-54 (274)
331 1rpn_A GDP-mannose 4,6-dehydra 90.9 0.28 9.6E-06 39.4 4.9 39 140-178 11-50 (335)
332 2dvm_A Malic enzyme, 439AA lon 90.8 0.14 4.9E-06 44.1 3.2 54 118-175 165-225 (439)
333 3qlj_A Short chain dehydrogena 90.8 0.23 7.9E-06 40.3 4.3 39 137-175 21-60 (322)
334 1xq1_A Putative tropinone redu 90.8 0.21 7.2E-06 39.0 4.0 39 139-177 10-49 (266)
335 1zsy_A Mitochondrial 2-enoyl t 90.8 0.17 5.9E-06 41.7 3.6 34 142-175 167-201 (357)
336 3zwc_A Peroxisomal bifunctiona 90.7 0.26 8.7E-06 45.3 4.9 34 144-177 317-350 (742)
337 4dmm_A 3-oxoacyl-[acyl-carrier 90.7 0.22 7.6E-06 39.4 4.0 37 139-175 24-61 (269)
338 2x9g_A PTR1, pteridine reducta 90.7 0.16 5.5E-06 40.4 3.2 40 137-176 17-57 (288)
339 3is3_A 17BETA-hydroxysteroid d 90.6 0.3 1E-05 38.5 4.7 39 137-175 12-51 (270)
340 1vdc_A NTR, NADPH dependent th 90.6 0.41 1.4E-05 38.3 5.6 37 141-177 157-193 (333)
341 1xhc_A NADH oxidase /nitrite r 90.5 0.25 8.7E-06 40.9 4.4 36 143-178 143-178 (367)
342 3gqv_A Enoyl reductase; medium 90.4 0.27 9.3E-06 40.8 4.5 33 141-173 163-196 (371)
343 1t2a_A GDP-mannose 4,6 dehydra 90.3 0.33 1.1E-05 39.8 4.9 35 144-178 25-60 (375)
344 3d1c_A Flavin-containing putat 90.3 0.33 1.1E-05 39.4 4.8 39 139-177 162-200 (369)
345 1g0o_A Trihydroxynaphthalene r 90.2 0.26 8.8E-06 39.1 4.1 39 139-177 25-64 (283)
346 3ldh_A Lactate dehydrogenase; 90.1 0.28 9.5E-06 40.7 4.2 36 142-177 20-57 (330)
347 2zbw_A Thioredoxin reductase; 90.1 0.45 1.5E-05 38.1 5.5 39 139-177 148-186 (335)
348 4eez_A Alcohol dehydrogenase 1 90.1 0.36 1.2E-05 39.3 5.0 37 141-177 162-199 (348)
349 1x7d_A Ornithine cyclodeaminas 90.0 0.32 1.1E-05 40.5 4.5 36 142-177 128-165 (350)
350 2gqw_A Ferredoxin reductase; f 90.0 0.39 1.3E-05 40.3 5.2 37 142-178 144-180 (408)
351 2dwc_A PH0318, 433AA long hypo 90.0 0.34 1.1E-05 40.9 4.8 36 142-177 18-53 (433)
352 4dqv_A Probable peptide synthe 90.0 0.34 1.2E-05 41.6 4.8 42 137-178 67-112 (478)
353 2a87_A TRXR, TR, thioredoxin r 89.9 0.52 1.8E-05 37.9 5.7 37 141-177 153-189 (335)
354 4a7p_A UDP-glucose dehydrogena 89.6 0.32 1.1E-05 41.9 4.4 40 138-177 317-366 (446)
355 2gv8_A Monooxygenase; FMO, FAD 89.6 0.45 1.5E-05 40.3 5.3 38 139-176 208-246 (447)
356 3tum_A Shikimate dehydrogenase 89.6 0.51 1.7E-05 37.9 5.3 41 138-178 120-161 (269)
357 4dvj_A Putative zinc-dependent 89.5 0.28 9.5E-06 40.7 3.8 36 142-177 171-208 (363)
358 2q0l_A TRXR, thioredoxin reduc 89.5 0.51 1.7E-05 37.3 5.3 37 141-177 141-177 (311)
359 3gk3_A Acetoacetyl-COA reducta 89.4 0.36 1.2E-05 37.9 4.3 39 138-176 20-59 (269)
360 1tt5_B Ubiquitin-activating en 89.4 0.23 7.7E-06 42.7 3.3 37 140-176 37-74 (434)
361 1xyg_A Putative N-acetyl-gamma 89.4 0.42 1.4E-05 39.9 4.8 33 143-175 16-50 (359)
362 2q7v_A Thioredoxin reductase; 89.3 0.62 2.1E-05 37.2 5.7 37 141-177 150-186 (325)
363 1trb_A Thioredoxin reductase; 89.3 0.61 2.1E-05 37.0 5.6 37 141-177 143-179 (320)
364 1xhl_A Short-chain dehydrogena 89.3 0.32 1.1E-05 39.0 4.0 38 140-177 23-61 (297)
365 4a2c_A Galactitol-1-phosphate 89.2 0.35 1.2E-05 39.4 4.2 37 141-177 159-196 (346)
366 3ab1_A Ferredoxin--NADP reduct 89.2 0.56 1.9E-05 38.1 5.5 39 139-177 159-197 (360)
367 1fl2_A Alkyl hydroperoxide red 89.2 0.5 1.7E-05 37.4 5.0 37 141-177 142-178 (310)
368 1v59_A Dihydrolipoamide dehydr 89.2 0.48 1.6E-05 40.4 5.2 37 143-179 183-219 (478)
369 1onf_A GR, grase, glutathione 89.1 0.56 1.9E-05 40.5 5.6 36 143-178 176-211 (500)
370 4f6c_A AUSA reductase domain p 89.0 0.43 1.5E-05 40.1 4.7 41 137-177 63-104 (427)
371 2bc0_A NADH oxidase; flavoprot 89.0 0.5 1.7E-05 40.6 5.2 37 142-178 193-229 (490)
372 3kd9_A Coenzyme A disulfide re 89.0 0.58 2E-05 39.6 5.5 37 142-178 147-183 (449)
373 2xve_A Flavin-containing monoo 88.9 0.32 1.1E-05 41.7 3.9 38 140-177 194-231 (464)
374 1dxh_A Ornithine carbamoyltran 88.9 1.4 4.8E-05 36.5 7.6 71 97-176 118-190 (335)
375 1w4x_A Phenylacetone monooxyge 88.8 0.33 1.1E-05 42.4 4.0 39 139-177 182-220 (542)
376 2v3a_A Rubredoxin reductase; a 88.8 0.55 1.9E-05 38.8 5.2 36 143-178 145-180 (384)
377 3itj_A Thioredoxin reductase 1 88.7 0.7 2.4E-05 36.7 5.6 38 140-177 170-207 (338)
378 2xdo_A TETX2 protein; tetracyc 88.7 0.71 2.4E-05 38.3 5.8 37 141-177 24-60 (398)
379 3rp8_A Flavoprotein monooxygen 88.7 0.52 1.8E-05 39.1 4.9 41 138-178 18-58 (407)
380 3ef6_A Toluene 1,2-dioxygenase 88.6 0.54 1.8E-05 39.4 5.0 37 142-178 142-178 (410)
381 1y8q_B Anthracycline-, ubiquit 88.4 0.25 8.5E-06 44.6 2.9 38 139-176 13-51 (640)
382 1nhp_A NADH peroxidase; oxidor 88.3 0.64 2.2E-05 39.3 5.4 36 142-177 148-183 (447)
383 1tt5_A APPBP1, amyloid protein 88.3 0.3 1E-05 43.0 3.4 39 138-176 27-66 (531)
384 3ic9_A Dihydrolipoamide dehydr 88.3 0.56 1.9E-05 40.4 5.1 36 143-178 174-209 (492)
385 2i6u_A Otcase, ornithine carba 88.3 3.4 0.00012 33.8 9.5 70 98-177 113-184 (307)
386 2a8x_A Dihydrolipoyl dehydroge 88.3 0.6 2E-05 39.7 5.2 37 142-178 170-206 (464)
387 4b1b_A TRXR, thioredoxin reduc 88.3 0.26 8.9E-06 43.5 2.9 32 144-175 224-255 (542)
388 1ges_A Glutathione reductase; 88.2 0.62 2.1E-05 39.6 5.2 35 143-177 167-201 (450)
389 2cdu_A NADPH oxidase; flavoenz 88.2 0.66 2.3E-05 39.3 5.4 36 143-178 149-184 (452)
390 4aj2_A L-lactate dehydrogenase 88.1 0.58 2E-05 38.7 4.8 39 139-177 15-55 (331)
391 2eq6_A Pyruvate dehydrogenase 88.1 0.64 2.2E-05 39.7 5.2 36 143-178 169-204 (464)
392 1ebd_A E3BD, dihydrolipoamide 87.9 0.63 2.2E-05 39.4 5.1 36 143-178 170-205 (455)
393 1lvl_A Dihydrolipoamide dehydr 87.9 0.51 1.7E-05 40.2 4.5 38 142-179 170-207 (458)
394 3lzw_A Ferredoxin--NADP reduct 87.8 0.85 2.9E-05 36.1 5.5 40 138-177 149-188 (332)
395 1zmd_A Dihydrolipoyl dehydroge 87.8 0.67 2.3E-05 39.5 5.2 36 143-178 178-213 (474)
396 2hqm_A GR, grase, glutathione 87.8 0.69 2.3E-05 39.6 5.3 36 142-177 184-219 (479)
397 2r9z_A Glutathione amide reduc 87.7 0.7 2.4E-05 39.4 5.2 35 143-177 166-200 (463)
398 4fb5_A Probable oxidoreductase 87.7 0.48 1.7E-05 38.9 4.1 36 143-178 25-69 (393)
399 1q1r_A Putidaredoxin reductase 87.6 0.74 2.5E-05 38.9 5.3 37 142-178 148-184 (431)
400 1ojt_A Surface protein; redox- 87.6 0.55 1.9E-05 40.2 4.5 36 143-178 185-220 (482)
401 2yqu_A 2-oxoglutarate dehydrog 87.6 0.72 2.5E-05 39.1 5.2 36 143-178 167-202 (455)
402 3g79_A NDP-N-acetyl-D-galactos 87.4 1.7 5.7E-05 37.8 7.5 60 116-179 330-399 (478)
403 1h6d_A Precursor form of gluco 87.3 0.49 1.7E-05 40.3 4.0 33 144-176 84-119 (433)
404 2qhx_A Pteridine reductase 1; 87.3 0.48 1.6E-05 38.7 3.8 37 140-176 43-81 (328)
405 4had_A Probable oxidoreductase 87.2 0.48 1.6E-05 38.7 3.8 34 144-177 24-60 (350)
406 4iiu_A 3-oxoacyl-[acyl-carrier 87.2 0.52 1.8E-05 36.9 3.9 37 137-173 20-57 (267)
407 2qae_A Lipoamide, dihydrolipoy 87.2 0.76 2.6E-05 39.1 5.2 37 142-178 173-209 (468)
408 3u5t_A 3-oxoacyl-[acyl-carrier 87.1 0.57 2E-05 36.9 4.1 36 140-175 24-60 (267)
409 3klj_A NAD(FAD)-dependent dehy 87.1 0.36 1.2E-05 40.4 3.0 38 143-180 146-183 (385)
410 3dk9_A Grase, GR, glutathione 86.9 0.71 2.4E-05 39.4 4.8 35 143-177 187-221 (478)
411 4a9w_A Monooxygenase; baeyer-v 86.9 1.3 4.6E-05 35.2 6.2 38 138-176 158-195 (357)
412 3ihm_A Styrene monooxygenase A 86.8 0.49 1.7E-05 40.0 3.7 34 143-176 22-55 (430)
413 1mo9_A ORF3; nucleotide bindin 86.7 0.86 2.9E-05 39.6 5.3 38 141-178 212-249 (523)
414 3cty_A Thioredoxin reductase; 86.7 0.97 3.3E-05 35.9 5.3 36 141-176 153-188 (319)
415 1z7e_A Protein aRNA; rossmann 86.6 0.57 2E-05 41.9 4.2 39 140-178 312-352 (660)
416 3fbs_A Oxidoreductase; structu 86.5 0.96 3.3E-05 35.2 5.1 38 139-177 137-174 (297)
417 1zk7_A HGII, reductase, mercur 86.4 0.9 3.1E-05 38.6 5.2 36 143-178 176-211 (467)
418 1pg5_A Aspartate carbamoyltran 86.2 4.4 0.00015 32.9 9.0 70 97-176 112-186 (299)
419 2i6t_A Ubiquitin-conjugating e 86.2 0.63 2.2E-05 37.9 3.9 35 143-177 14-50 (303)
420 2nvu_B Maltose binding protein 86.2 0.54 1.8E-05 43.2 3.9 36 141-176 409-445 (805)
421 3lxd_A FAD-dependent pyridine 86.2 0.96 3.3E-05 37.8 5.2 37 143-179 152-188 (415)
422 3ntd_A FAD-dependent pyridine 86.1 0.87 3E-05 39.6 5.0 37 142-178 150-186 (565)
423 2r7k_A 5-formaminoimidazole-4- 86.0 0.86 2.9E-05 38.0 4.8 37 140-177 15-51 (361)
424 3l8k_A Dihydrolipoyl dehydroge 86.0 1 3.5E-05 38.3 5.4 37 142-178 171-207 (466)
425 3upl_A Oxidoreductase; rossman 85.9 0.73 2.5E-05 39.7 4.4 33 144-176 24-58 (446)
426 2ixa_A Alpha-N-acetylgalactosa 85.8 0.68 2.3E-05 39.4 4.1 34 144-177 21-56 (444)
427 3fg2_P Putative rubredoxin red 85.8 0.89 3E-05 37.9 4.8 37 143-179 142-178 (404)
428 1duv_G Octase-1, ornithine tra 85.8 1.4 4.9E-05 36.4 5.9 71 98-176 118-190 (333)
429 3oc4_A Oxidoreductase, pyridin 85.7 0.9 3.1E-05 38.5 4.8 37 142-178 146-182 (452)
430 1cjc_A Protein (adrenodoxin re 85.4 1.3 4.3E-05 38.0 5.6 38 140-177 142-200 (460)
431 1dxl_A Dihydrolipoamide dehydr 85.3 0.62 2.1E-05 39.6 3.7 37 142-178 176-212 (470)
432 3cgb_A Pyridine nucleotide-dis 85.3 0.64 2.2E-05 39.8 3.7 36 142-177 185-220 (480)
433 3q98_A Transcarbamylase; rossm 85.3 5.2 0.00018 33.9 9.2 68 102-176 157-232 (399)
434 3rku_A Oxidoreductase YMR226C; 85.3 0.45 1.5E-05 38.0 2.6 39 139-177 29-71 (287)
435 2nwq_A Probable short-chain de 85.1 0.55 1.9E-05 37.2 3.0 38 139-177 18-56 (272)
436 3cmm_A Ubiquitin-activating en 85.1 0.6 2.1E-05 44.3 3.7 37 140-176 422-464 (1015)
437 3r7f_A Aspartate carbamoyltran 85.0 5.9 0.0002 32.3 9.2 69 97-175 110-182 (304)
438 3r9u_A Thioredoxin reductase; 85.0 1.2 4.2E-05 34.9 5.1 37 141-177 145-181 (315)
439 3urh_A Dihydrolipoyl dehydroge 84.9 0.78 2.7E-05 39.3 4.1 37 142-178 197-233 (491)
440 3ijp_A DHPR, dihydrodipicolina 84.8 0.94 3.2E-05 36.7 4.3 34 144-177 22-58 (288)
441 3f8d_A Thioredoxin reductase ( 84.7 0.94 3.2E-05 35.7 4.3 38 140-177 151-188 (323)
442 3lad_A Dihydrolipoamide dehydr 84.7 1.1 3.9E-05 38.0 5.0 37 142-178 179-215 (476)
443 1vlv_A Otcase, ornithine carba 84.7 4.9 0.00017 33.1 8.6 94 70-176 107-202 (325)
444 3slk_A Polyketide synthase ext 84.7 0.55 1.9E-05 43.3 3.2 37 140-176 343-380 (795)
445 3oml_A GH14720P, peroxisomal m 84.6 0.66 2.3E-05 41.4 3.6 39 136-174 12-51 (613)
446 3d6n_B Aspartate carbamoyltran 84.5 6.9 0.00024 31.7 9.3 71 96-176 108-182 (291)
447 3gg2_A Sugar dehydrogenase, UD 84.4 1.1 3.8E-05 38.4 4.9 40 138-177 313-362 (450)
448 4a27_A Synaptic vesicle membra 84.4 0.83 2.8E-05 37.4 3.9 34 141-174 141-176 (349)
449 4eqs_A Coenzyme A disulfide re 84.4 1.1 3.7E-05 38.0 4.7 36 143-178 147-182 (437)
450 3ics_A Coenzyme A-disulfide re 84.2 1.3 4.6E-05 38.8 5.4 37 142-178 186-222 (588)
451 3u0b_A Oxidoreductase, short c 84.1 0.98 3.4E-05 38.7 4.4 38 139-176 209-247 (454)
452 2bry_A NEDD9 interacting prote 84.1 1.2 4.1E-05 38.5 4.9 36 142-177 91-126 (497)
453 3s5w_A L-ornithine 5-monooxyge 83.7 0.69 2.3E-05 39.1 3.2 36 142-177 226-263 (463)
454 2ef0_A Ornithine carbamoyltran 83.7 5.3 0.00018 32.5 8.4 71 97-177 118-189 (301)
455 4gqa_A NAD binding oxidoreduct 83.7 0.55 1.9E-05 39.4 2.5 33 144-176 27-69 (412)
456 2vdc_G Glutamate synthase [NAD 83.6 0.8 2.7E-05 39.3 3.6 37 141-177 120-156 (456)
457 2qrj_A Saccharopine dehydrogen 83.5 0.6 2E-05 39.6 2.6 35 142-176 213-251 (394)
458 1pvv_A Otcase, ornithine carba 83.4 7.2 0.00024 31.9 9.1 71 97-177 119-190 (315)
459 3cmm_A Ubiquitin-activating en 83.4 1 3.4E-05 42.8 4.4 39 138-176 22-61 (1015)
460 2w37_A Ornithine carbamoyltran 83.4 4.8 0.00017 33.6 8.1 94 70-176 116-211 (359)
461 2wpf_A Trypanothione reductase 83.3 1.1 3.8E-05 38.6 4.4 36 143-178 191-229 (495)
462 4a8t_A Putrescine carbamoyltra 83.1 5.2 0.00018 33.1 8.2 75 96-177 135-210 (339)
463 3itj_A Thioredoxin reductase 1 83.0 0.96 3.3E-05 35.9 3.7 35 142-176 21-55 (338)
464 1fec_A Trypanothione reductase 83.0 1.2 4E-05 38.3 4.4 35 143-177 187-224 (490)
465 1xdi_A RV3303C-LPDA; reductase 82.8 1.2 4E-05 38.3 4.3 37 142-178 181-217 (499)
466 2gag_B Heterotetrameric sarcos 82.7 1.4 4.8E-05 36.1 4.6 34 143-176 21-56 (405)
467 4a8p_A Putrescine carbamoyltra 82.6 5.5 0.00019 33.2 8.1 74 97-177 114-188 (355)
468 3axb_A Putative oxidoreductase 82.6 1 3.6E-05 37.7 3.9 34 142-175 22-56 (448)
469 4b63_A L-ornithine N5 monooxyg 82.4 2.1 7.3E-05 36.9 5.8 40 138-177 241-282 (501)
470 3s8m_A Enoyl-ACP reductase; ro 82.1 1.5 5.1E-05 37.5 4.6 37 142-178 60-98 (422)
471 4dna_A Probable glutathione re 82.0 1.6 5.4E-05 37.1 4.8 36 142-177 169-204 (463)
472 3iwa_A FAD-dependent pyridine 81.9 1.4 4.8E-05 37.4 4.5 37 142-178 158-195 (472)
473 1gq2_A Malic enzyme; oxidoredu 81.9 2.2 7.6E-05 37.6 5.7 68 99-176 248-326 (555)
474 3o0h_A Glutathione reductase; 81.8 1.6 5.5E-05 37.3 4.8 36 142-177 190-225 (484)
475 1ryi_A Glycine oxidase; flavop 81.8 1.3 4.6E-05 36.0 4.1 34 143-176 17-50 (382)
476 1zh8_A Oxidoreductase; TM0312, 81.4 1.1 3.9E-05 36.5 3.6 35 143-177 18-56 (340)
477 1ml4_A Aspartate transcarbamoy 81.4 3.8 0.00013 33.5 6.7 70 97-176 118-191 (308)
478 2q3e_A UDP-glucose 6-dehydroge 81.2 1.6 5.4E-05 37.5 4.5 39 140-178 326-374 (467)
479 4amu_A Ornithine carbamoyltran 81.2 6.8 0.00023 32.8 8.2 70 97-176 144-215 (365)
480 4ekn_B Aspartate carbamoyltran 81.0 12 0.00041 30.4 9.5 70 97-176 114-188 (306)
481 2vdc_G Glutamate synthase [NAD 80.9 1.8 6.2E-05 37.0 4.8 38 140-177 261-299 (456)
482 1rp0_A ARA6, thiazole biosynth 80.9 1.9 6.4E-05 34.1 4.6 34 144-177 40-74 (284)
483 1mv8_A GMD, GDP-mannose 6-dehy 80.9 1.2 4.1E-05 37.9 3.6 35 142-176 312-356 (436)
484 4h31_A Otcase, ornithine carba 80.9 6.1 0.00021 32.9 7.9 73 95-175 141-215 (358)
485 1oth_A Protein (ornithine tran 80.7 7.6 0.00026 31.9 8.3 71 97-177 119-190 (321)
486 2py6_A Methyltransferase FKBM; 80.7 0.77 2.6E-05 38.8 2.4 32 143-174 52-84 (409)
487 1lqt_A FPRA; NADP+ derivative, 80.7 2.3 7.8E-05 36.3 5.4 38 140-177 144-202 (456)
488 1dlj_A UDP-glucose dehydrogena 80.6 2.4 8.2E-05 35.6 5.4 39 140-178 306-354 (402)
489 2r0c_A REBC; flavin adenine di 80.6 1.9 6.4E-05 37.7 4.9 35 144-178 27-61 (549)
490 2iid_A L-amino-acid oxidase; f 80.4 1.5 5E-05 37.4 4.1 36 142-177 32-67 (498)
491 3ojo_A CAP5O; rossmann fold, c 80.1 2.1 7.3E-05 36.6 4.9 40 140-179 312-362 (431)
492 3i3l_A Alkylhalidase CMLS; fla 80.0 2.7 9.3E-05 37.2 5.8 38 140-177 20-57 (591)
493 3dgh_A TRXR-1, thioredoxin red 80.0 2 6.7E-05 36.7 4.7 34 142-175 186-219 (483)
494 3ps9_A TRNA 5-methylaminomethy 79.9 2.7 9.2E-05 37.6 5.8 34 143-176 272-305 (676)
495 3f8d_A Thioredoxin reductase ( 79.8 1.4 4.8E-05 34.6 3.5 33 143-175 15-47 (323)
496 1hyu_A AHPF, alkyl hydroperoxi 79.8 1.5 5E-05 38.1 3.9 37 141-177 353-389 (521)
497 3grf_A Ornithine carbamoyltran 79.6 6 0.00021 32.6 7.3 76 96-176 117-196 (328)
498 2x8g_A Thioredoxin glutathione 79.3 1.4 4.7E-05 38.8 3.6 34 142-175 285-318 (598)
499 3ab1_A Ferredoxin--NADP reduct 79.2 1.7 5.7E-05 35.2 3.9 35 143-177 14-48 (360)
500 3cty_A Thioredoxin reductase; 78.9 1.7 5.9E-05 34.4 3.8 33 143-175 16-48 (319)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=2.2e-35 Score=249.53 Aligned_cols=158 Identities=23% Similarity=0.272 Sum_probs=133.1
Q ss_pred CCcceEEEeCCCCCCchhHHHHHhhcccCceeeeC----ch-hHHhhcCCCeE-Eec-CCCCCHHHHhcC-CCCeEEEEc
Q 044056 14 KSITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF----FL-SMHSLYASYGT-SEQ-MIASDSNVITRA-NPMNLIIRF 85 (189)
Q Consensus 14 ~~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~-~~~~~~~~adv-i~~-~~~~~~~~l~~~-p~Lk~I~~~ 85 (189)
+.|||||++.+..+.. .+.++...++++... +. ++.+.++++|+ +.+ ..++++++|+++ |+||||++.
T Consensus 26 ~~~~kvlv~~~~~~~~----~~~l~~~~~v~~~~~~~~~~~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~ 101 (345)
T 4g2n_A 26 HPIQKAFLCRRFTPAI----EAELRQRFDLEVNLEDTVLTPSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATL 101 (345)
T ss_dssp -CCCEEEESSCCCHHH----HHHHHHHSEEEECTTCCCCCHHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEES
T ss_pred CCCCEEEEeCCCCHHH----HHHHHccCCEEEecCCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEc
Confidence 4579999999876543 234444334544322 23 67888999999 554 478999999997 799999999
Q ss_pred CCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C-------CCCCCCCCCEEEE
Q 044056 86 RVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V-------PTGETLLGKTVFI 148 (189)
Q Consensus 86 ~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~-------~~~~~l~gktvGI 148 (189)
|+|+|+||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..+.+|+||||||
T Consensus 102 ~~G~D~id~~~a~~~gI~V~n~pg~---~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGI 178 (345)
T 4g2n_A 102 SVGYDHIDMAAARSLGIKVLHTPDV---LSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGI 178 (345)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCCSC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEE
T ss_pred CCcccccCHHHHHhCCEEEEECCcc---cchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEE
Confidence 9999999999999999999999999 899999999999999999986 1 2368999999999
Q ss_pred EcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 149 SGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 149 vG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
||+|+||+++|++|++|||+|++|||++.+
T Consensus 179 IGlG~IG~~vA~~l~~~G~~V~~~dr~~~~ 208 (345)
T 4g2n_A 179 FGMGRIGRAIATRARGFGLAIHYHNRTRLS 208 (345)
T ss_dssp ESCSHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred EEeChhHHHHHHHHHHCCCEEEEECCCCcc
Confidence 999999999999999999999999998643
No 2
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=7.8e-36 Score=251.57 Aligned_cols=157 Identities=19% Similarity=0.177 Sum_probs=130.8
Q ss_pred ceEEEeCCCCCCchhHHHHHhhcccCceeeeCch-h-HHhhcCCCeE-Ee-cCCCCCHHHHhcCCCCeEEEEcCCCCCcC
Q 044056 17 TLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFFL-S-MHSLYASYGT-SE-QMIASDSNVITRANPMNLIIRFRVGLEGV 92 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~~~~adv-i~-~~~~~~~~~l~~~p~Lk~I~~~~aG~d~i 92 (189)
||||++.... +...++++.++.+ ++++...+. + ..+.++++|+ ++ ..+++++++|+++|+||||++.|+|+|||
T Consensus 1 Mkil~~~~~~-~~~p~~~e~l~~~-~~~~~~~~~~~~~~~~l~~ad~i~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~i 78 (334)
T 3kb6_A 1 MNVLFTSVPQ-EDVPFYQEALKDL-SLKIYTTDVSKVPENELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHI 78 (334)
T ss_dssp -CEEECSCCT-THHHHHHHHTTTS-CEEECSSCGGGSCHHHHHHCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTB
T ss_pred CEEEEeCCCc-ccCHHHHHHHHhC-CcEEEeCCcccCCHHHhcCCCEEEEeCCCCCCHHHHhcCCCCcEEEECCcccchh
Confidence 7899987553 3444566666553 344444332 2 2345778999 44 45789999999999999999999999999
Q ss_pred ChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC---------------CCCCCCCCCCEEEEEcCCHHHHH
Q 044056 93 DIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI---------------VPTGETLLGKTVFISGFGNIGVE 157 (189)
Q Consensus 93 d~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~---------------~~~~~~l~gktvGIvG~G~IG~~ 157 (189)
|+++++++||.|+|+||+ ++++||||+++++|++.|++. ...+.+|+||||||||+|+||++
T Consensus 79 d~~~~~~~gI~v~n~p~~---~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~ 155 (334)
T 3kb6_A 79 DLDYCKKKGILVTHIPAY---SPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSR 155 (334)
T ss_dssp CHHHHHHHTCEEECCTTS---CHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHH
T ss_pred cHHHHHHCCCEEEECCCc---CcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHH
Confidence 999999999999999999 899999999999999999987 23568999999999999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCC
Q 044056 158 LAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 158 vA~~l~afG~~V~~~~r~~~~ 178 (189)
+|+++++|||+|++|||+.++
T Consensus 156 va~~~~~fg~~v~~~d~~~~~ 176 (334)
T 3kb6_A 156 VAMYGLAFGMKVLCYDVVKRE 176 (334)
T ss_dssp HHHHHHHTTCEEEEECSSCCH
T ss_pred HHHhhcccCceeeecCCccch
Confidence 999999999999999998664
No 3
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=1.7e-35 Score=248.33 Aligned_cols=160 Identities=18% Similarity=0.178 Sum_probs=133.8
Q ss_pred CCCcceEEEeCCCCCCchhHHHHHh--hcccCceeeeCch--hHHhhcCCCeEEecCCCCCHHHHhcCCCCeEEEEcCCC
Q 044056 13 DKSITLVLFRGPHFPASHNYAKGYL--QNYLSIKGLCFFL--SMHSLYASYGTSEQMIASDSNVITRANPMNLIIRFRVG 88 (189)
Q Consensus 13 ~~~~~~ilv~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~--~~~~~~~~advi~~~~~~~~~~l~~~p~Lk~I~~~~aG 88 (189)
++++|||+++.+..+. + .+.| +.+|++++..... ++.+.++++|+++...++++++|+++|+||||++.|+|
T Consensus 2 ~~~~mkili~~~~~~~---~-~~~L~~~~~p~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~l~~~~~Lk~I~~~~~G 77 (324)
T 3hg7_A 2 SLSQRTLLLLSQDNAH---Y-ERLLKAAHLPHLRILRADNQSDAEKLIGEAHILMAEPARAKPLLAKANKLSWFQSTYAG 77 (324)
T ss_dssp --CCEEEEEESTTHHH---H-HHHHHHSCCTTEEEEECSSHHHHHHHGGGCSEEEECHHHHGGGGGGCTTCCEEEESSSC
T ss_pred CccccEEEEecCCCHH---H-HHHHhhccCCCeEEEeCCChhHHHHHhCCCEEEEECCCCCHHHHhhCCCceEEEECCCC
Confidence 4567999999887432 3 3444 4568888876543 67788999999443445667899999999999999999
Q ss_pred CCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC------------CCCCCCCCCCEEEEEcCCHHHH
Q 044056 89 LEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI------------VPTGETLLGKTVFISGFGNIGV 156 (189)
Q Consensus 89 ~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~------------~~~~~~l~gktvGIvG~G~IG~ 156 (189)
+|+||.+++. +||.|+|+||+ ++++||||+++++|++.|+++ ...+.+|+|+||||||+|+||+
T Consensus 78 ~d~id~~~~~-~gI~v~n~~g~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~ 153 (324)
T 3hg7_A 78 VDVLLDARCR-RDYQLTNVRGI---FGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQ 153 (324)
T ss_dssp CGGGSCTTSC-CSSEEECCCSC---CHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHH
T ss_pred CCccChHHHh-CCEEEEECCCc---ChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHH
Confidence 9999998875 59999999999 899999999999999999987 3356899999999999999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCcc
Q 044056 157 ELAKRLRPFGVKIIAAKRSWASHS 180 (189)
Q Consensus 157 ~vA~~l~afG~~V~~~~r~~~~~~ 180 (189)
++|+++++|||+|++|||++++..
T Consensus 154 ~vA~~l~~~G~~V~~~dr~~~~~~ 177 (324)
T 3hg7_A 154 HIAHTGKHFGMKVLGVSRSGRERA 177 (324)
T ss_dssp HHHHHHHHTTCEEEEECSSCCCCT
T ss_pred HHHHHHHhCCCEEEEEcCChHHhh
Confidence 999999999999999999875543
No 4
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=4.5e-35 Score=246.94 Aligned_cols=158 Identities=19% Similarity=0.182 Sum_probs=135.1
Q ss_pred ceEEEeCCCCCCchhHHHHHhhcccCceeeeCch--hHHhhcCCCeE-Eec-CCCCCHHHHhcCCCCeEEEEcCCCCCcC
Q 044056 17 TLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFFL--SMHSLYASYGT-SEQ-MIASDSNVITRANPMNLIIRFRVGLEGV 92 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~adv-i~~-~~~~~~~~l~~~p~Lk~I~~~~aG~d~i 92 (189)
|||++++.. +...+++.++++.+ ++++..... ++.+.++++|+ +++ ..++++++++++|+||||++.|+|+|||
T Consensus 1 Mki~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~i 78 (334)
T 2pi1_A 1 MNVLFTSVP-QEDVPFYQEALKDL-SLKIYTTDVSKVPENELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHI 78 (334)
T ss_dssp CEEEECSCC-TTHHHHHHHHTTTS-EEEECSSCGGGSCHHHHHHCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTB
T ss_pred CEEEEEccC-hhhHHHHHHHhhcC-CEEEECCCCcHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcccccc
Confidence 689988865 44555666666554 566633222 56778899999 654 6789999999999999999999999999
Q ss_pred ChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC------------CC---CCCCCCCCEEEEEcCCHHHHH
Q 044056 93 DIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI------------VP---TGETLLGKTVFISGFGNIGVE 157 (189)
Q Consensus 93 d~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~------------~~---~~~~l~gktvGIvG~G~IG~~ 157 (189)
|+++++++||.|+|+||+ ++++||||+++++|++.|+++ .. .+.+|+|+||||||+|+||++
T Consensus 79 d~~~~~~~gI~v~n~p~~---~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~ 155 (334)
T 2pi1_A 79 DLDYCKKKGILVTHIPAY---SPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSR 155 (334)
T ss_dssp CHHHHHHHTCEEECCTTS---CHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHH
T ss_pred CHHHHHHCCeEEEECCCc---CcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHH
Confidence 999999999999999999 889999999999999999987 11 367999999999999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCc
Q 044056 158 LAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 158 vA~~l~afG~~V~~~~r~~~~~ 179 (189)
+|+++++|||+|++|||++++.
T Consensus 156 vA~~l~~~G~~V~~~d~~~~~~ 177 (334)
T 2pi1_A 156 VAMYGLAFGMKVLCYDVVKRED 177 (334)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH
T ss_pred HHHHHHHCcCEEEEECCCcchh
Confidence 9999999999999999987653
No 5
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1.4e-34 Score=249.33 Aligned_cols=158 Identities=20% Similarity=0.182 Sum_probs=133.8
Q ss_pred CCcceEEEeCCCCCCchhHHHHHhhcc--cCceeeeC--ch-hHHhhcCCCeE-Ee-cCCCCCHHHHhcCCCCeEEEEcC
Q 044056 14 KSITLVLFRGPHFPASHNYAKGYLQNY--LSIKGLCF--FL-SMHSLYASYGT-SE-QMIASDSNVITRANPMNLIIRFR 86 (189)
Q Consensus 14 ~~~~~ilv~~~~~~~~~~~~~~~l~~~--~~~~~~~~--~~-~~~~~~~~adv-i~-~~~~~~~~~l~~~p~Lk~I~~~~ 86 (189)
+.+||||++++..+.. .+.|+.. .++++... ++ ++.+.++++|+ ++ ...++++++|+.+|+||+|++++
T Consensus 13 ~~~~kIl~~~~i~~~~----~~~l~~~g~~~v~~~~~~~~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~p~Lk~I~~~~ 88 (416)
T 3k5p_A 13 RDRINVLLLEGISQTA----VEYFKSSGYTNVTHLPKALDKADLIKAISSAHIIGIRSRTQLTEEIFAAANRLIAVGCFS 88 (416)
T ss_dssp GGGSCEEECSCCCHHH----HHHHHHTTCCCEEECSSCCCHHHHHHHHTTCSEEEECSSCCBCHHHHHHCTTCCEEEECS
T ss_pred CCCcEEEEECCCCHHH----HHHHHHCCCcEEEECCCCCCHHHHHHHccCCEEEEEcCCCCCCHHHHHhCCCcEEEEECc
Confidence 4479999999876543 3445432 24443332 23 67888999999 44 34689999999999999999999
Q ss_pred CCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC--------------CCCCCCCCCCEEEEEcCC
Q 044056 87 VGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI--------------VPTGETLLGKTVFISGFG 152 (189)
Q Consensus 87 aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~--------------~~~~~~l~gktvGIvG~G 152 (189)
+|+||||+++++++||+|+|+||+ ++++||||+++++|++.|+++ ...+.+++||||||||+|
T Consensus 89 ~G~d~IDl~~a~~~GI~V~n~p~~---n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG 165 (416)
T 3k5p_A 89 VGTNQVELKAARKRGIPVFNAPFS---NTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYG 165 (416)
T ss_dssp SCCTTBCHHHHHHTTCCEECCSST---THHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCS
T ss_pred cccCccCHHHHHhcCcEEEeCCCc---ccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeC
Confidence 999999999999999999999999 899999999999999999987 224689999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 153 NIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 153 ~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+||+.+|+++++|||+|++||++++.
T Consensus 166 ~IG~~vA~~l~~~G~~V~~yd~~~~~ 191 (416)
T 3k5p_A 166 NIGSQVGNLAESLGMTVRYYDTSDKL 191 (416)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTCCC
T ss_pred HHHHHHHHHHHHCCCEEEEECCcchh
Confidence 99999999999999999999998654
No 6
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=1.8e-34 Score=242.92 Aligned_cols=155 Identities=18% Similarity=0.120 Sum_probs=132.4
Q ss_pred cceEEEeCCCCCCchhHHHHHhhcccCceeeeC----ch-hHHhhcCCCeE-Ee-cCCCCCHHHHhcCCCCeEEEEcCCC
Q 044056 16 ITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF----FL-SMHSLYASYGT-SE-QMIASDSNVITRANPMNLIIRFRVG 88 (189)
Q Consensus 16 ~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~-~~~~~~~~adv-i~-~~~~~~~~~l~~~p~Lk~I~~~~aG 88 (189)
+||||++.+..+.. .+.|+...++.+... +. ++.+.++++|+ +. +..++++++|+.+|+||||++.|+|
T Consensus 2 ~~kvlv~~~~~~~~----~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~~~Lk~I~~~~~G 77 (330)
T 4e5n_A 2 LPKLVITHRVHEEI----LQLLAPHCELITNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQACPELRVIGCALKG 77 (330)
T ss_dssp CCEEEECSCCCHHH----HHHHTTTCEEECCCSSSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHCTTCCEEEESSSC
T ss_pred CCEEEEecCCCHHH----HHHHHhCCeEEEecCCCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhCCCCcEEEECCCc
Confidence 58999998875432 355555444443321 23 67788999999 55 5678999999999999999999999
Q ss_pred CCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------------CCCCCCCCCCEEEEEcCC
Q 044056 89 LEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------------VPTGETLLGKTVFISGFG 152 (189)
Q Consensus 89 ~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------------~~~~~~l~gktvGIvG~G 152 (189)
+||||+++++++||.|+|+||+ ++++||||+++++|++.|+++ ...+.+|+|+||||||+|
T Consensus 78 ~d~id~~~~~~~gI~v~n~~~~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G 154 (330)
T 4e5n_A 78 FDNFDVDACTARGVWLTFVPDL---LTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMG 154 (330)
T ss_dssp CTTBCHHHHHHTTCEEECCSST---THHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCS
T ss_pred ccccCHHHHHhcCcEEEeCCCC---CchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeC
Confidence 9999999999999999999999 899999999999999999986 123678999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 153 NIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 153 ~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+||+++|+++++|||+|++|||++.
T Consensus 155 ~IG~~vA~~l~~~G~~V~~~d~~~~ 179 (330)
T 4e5n_A 155 AIGLAMADRLQGWGATLQYHEAKAL 179 (330)
T ss_dssp HHHHHHHHHTTTSCCEEEEECSSCC
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCC
Confidence 9999999999999999999999873
No 7
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-34 Score=244.59 Aligned_cols=161 Identities=25% Similarity=0.288 Sum_probs=129.9
Q ss_pred CCcceEEEeCCCCCCchhHHHHHhhcccCceeeeC--ch-hHHhhcCCCeE-Eec-CCCCCHHHHhcCCCCeEEEEcCCC
Q 044056 14 KSITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF--FL-SMHSLYASYGT-SEQ-MIASDSNVITRANPMNLIIRFRVG 88 (189)
Q Consensus 14 ~~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~-~~~~~~~~adv-i~~-~~~~~~~~l~~~p~Lk~I~~~~aG 88 (189)
|.+++||++.+..+.. .+.|+...++..... +. ++.+.++++|+ +++ ..++++++++++|+||||++.|+|
T Consensus 28 ~~~~~vl~~~~~~~~~----~~~L~~~~~v~~~~~~~~~~~~~~~~~~~d~li~~~~~~i~~~~l~~~p~Lk~I~~~g~G 103 (340)
T 4dgs_A 28 NVKPDLLLVEPMMPFV----MDELQRNYSVHRLYQAADRPALEAALPSIRAVATGGGAGLSNEWMEKLPSLGIIAINGVG 103 (340)
T ss_dssp -----CEECSCCCHHH----HHTHHHHSCCEETTCGGGHHHHHHHGGGCCEEEEETTTCBCHHHHHHCSSCCEEEEESSC
T ss_pred CCCCEEEEECCCCHHH----HHHHhcCCcEEEeCCCCCHHHHHHHhCCcEEEEEcCCCCCCHHHHhhCCCCEEEEECCCC
Confidence 4568899999876543 334444334433221 22 56666689999 553 468999999999999999999999
Q ss_pred CCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC------------C----CCCCCCCCCEEEEEcCC
Q 044056 89 LEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI------------V----PTGETLLGKTVFISGFG 152 (189)
Q Consensus 89 ~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~------------~----~~~~~l~gktvGIvG~G 152 (189)
+|+||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . +.+.+|+||||||||+|
T Consensus 104 ~d~id~~~a~~~gI~V~n~pg~---~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG 180 (340)
T 4dgs_A 104 TDKVDLARARRRNIDVTTTPGV---LADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLG 180 (340)
T ss_dssp CTTBCHHHHHHTTCEEECCCSS---SHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCS
T ss_pred ccccCHHHHHhCCEEEEECCCC---CcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCC
Confidence 9999999999999999999999 899999999999999999987 1 23579999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCccc
Q 044056 153 NIGVELAKRLRPFGVKIIAAKRSWASHSQ 181 (189)
Q Consensus 153 ~IG~~vA~~l~afG~~V~~~~r~~~~~~~ 181 (189)
+||+++|+++++|||+|++|||++.+..+
T Consensus 181 ~IG~~vA~~l~~~G~~V~~~dr~~~~~~~ 209 (340)
T 4dgs_A 181 QIGRALASRAEAFGMSVRYWNRSTLSGVD 209 (340)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSSCCTTSC
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCcccccC
Confidence 99999999999999999999998766433
No 8
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=5.3e-35 Score=245.49 Aligned_cols=157 Identities=20% Similarity=0.273 Sum_probs=130.5
Q ss_pred cceEEEeCCCCCCchhHHHHHh-hcccCceeeeCchhHHhhcCCCeE-EecCCCCCHHHH-hcCCCCeEEEEcCCCCCcC
Q 044056 16 ITLVLFRGPHFPASHNYAKGYL-QNYLSIKGLCFFLSMHSLYASYGT-SEQMIASDSNVI-TRANPMNLIIRFRVGLEGV 92 (189)
Q Consensus 16 ~~~ilv~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~adv-i~~~~~~~~~~l-~~~p~Lk~I~~~~aG~d~i 92 (189)
|||||++.+..+.. .+.| +.++++++...++...+.++++|+ +.+..++ +++| +.+|+||||++.|+|+|+|
T Consensus 1 m~kil~~~~~~~~~----~~~L~~~~~~~~~~~~~~~~~~~~~~ad~l~~~~~~~-~~~l~~~~~~Lk~I~~~~~G~d~i 75 (324)
T 3evt_A 1 MSLVLMAQATKPEQ----LQQLQTTYPDWTFKDAAAVTAADYDQIEVMYGNHPLL-KTILARPTNQLKFVQVISAGVDYL 75 (324)
T ss_dssp -CEEEECSCCCHHH----HHHHHHHCTTCEEEETTSCCTTTGGGEEEEESCCTHH-HHHHHSTTCCCCEEECSSSCCTTS
T ss_pred CcEEEEecCCCHHH----HHHHHhhCCCeEEecCCccChHHhCCcEEEEECCcCh-HHHHHhhCCCceEEEECCcccccc
Confidence 68999999876543 2334 345666665443223456778999 6665566 8889 7899999999999999999
Q ss_pred ChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC-------------CC-CCCCCCCCEEEEEcCCHHHHHH
Q 044056 93 DIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI-------------VP-TGETLLGKTVFISGFGNIGVEL 158 (189)
Q Consensus 93 d~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~-------------~~-~~~~l~gktvGIvG~G~IG~~v 158 (189)
|++++.++||.|+|+||+ ++++||||+++++|++.|+++ .. .+.+|+||||||||+|+||+++
T Consensus 76 d~~~~~~~gI~v~n~~g~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~v 152 (324)
T 3evt_A 76 PLKALQAAGVVVANTSGI---HADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSL 152 (324)
T ss_dssp CHHHHHHTTCEEECCTTH---HHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHH
T ss_pred CHHHHHHCCcEEEECCCc---CchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHH
Confidence 999999999999999998 899999999999999999975 11 4789999999999999999999
Q ss_pred HHHHccCCCEEEEEcCCCCCcc
Q 044056 159 AKRLRPFGVKIIAAKRSWASHS 180 (189)
Q Consensus 159 A~~l~afG~~V~~~~r~~~~~~ 180 (189)
|++|++|||+|++|||++++.+
T Consensus 153 A~~l~~~G~~V~~~dr~~~~~~ 174 (324)
T 3evt_A 153 AAKASALGMHVIGVNTTGHPAD 174 (324)
T ss_dssp HHHHHHTTCEEEEEESSCCCCT
T ss_pred HHHHHhCCCEEEEECCCcchhH
Confidence 9999999999999999876543
No 9
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=5e-34 Score=245.89 Aligned_cols=158 Identities=21% Similarity=0.110 Sum_probs=131.4
Q ss_pred CcceEEEeCCCCCCchhHHHHHhhcc-c-CceeeeC--ch-hHHhhcCCCeE-Ee-cCCCCCHHHHhcCCCCeEEEEcCC
Q 044056 15 SITLVLFRGPHFPASHNYAKGYLQNY-L-SIKGLCF--FL-SMHSLYASYGT-SE-QMIASDSNVITRANPMNLIIRFRV 87 (189)
Q Consensus 15 ~~~~ilv~~~~~~~~~~~~~~~l~~~-~-~~~~~~~--~~-~~~~~~~~adv-i~-~~~~~~~~~l~~~p~Lk~I~~~~a 87 (189)
+||||+++++..+.. .+.|+.. . ++++... +. ++.+.++++|+ ++ ..+++++++|+.+|+||||+++|+
T Consensus 3 ~~~kil~~~~~~~~~----~~~l~~~~~~~v~~~~~~~~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~~~Lk~I~~~~~ 78 (404)
T 1sc6_A 3 DKIKFLLVEGVHQKA----LESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGAFAI 78 (404)
T ss_dssp SSCCEEECSCCCHHH----HHHHHHTTCCCEEECSSCCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHCSSCCEEEECSS
T ss_pred CceEEEEeCCCCHHH----HHHHHhCCCcEEEEcCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCcEEEECCc
Confidence 468999988764432 3444432 2 3443321 23 67788999999 44 346899999999999999999999
Q ss_pred CCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC--------------CCCCCCCCCCEEEEEcCCH
Q 044056 88 GLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI--------------VPTGETLLGKTVFISGFGN 153 (189)
Q Consensus 88 G~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~--------------~~~~~~l~gktvGIvG~G~ 153 (189)
|+||||+++++++||.|+|+||+ ++++||||+++++|++.|+++ ...+.+|+||||||||+|+
T Consensus 79 G~d~iD~~~a~~~GI~V~n~p~~---n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~ 155 (404)
T 1sc6_A 79 GTNQVDLDAAAKRGIPVFNAPFS---NTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGH 155 (404)
T ss_dssp CCTTBCHHHHHHTTCCEECCTTT---THHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSH
T ss_pred ccCccCHHHHHhCCCEEEecCcc---cHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECH
Confidence 99999999999999999999999 999999999999999999987 1246799999999999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 154 IGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 154 IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
||+.+|+++++|||+|++|||++...
T Consensus 156 IG~~vA~~l~~~G~~V~~~d~~~~~~ 181 (404)
T 1sc6_A 156 IGTQLGILAESLGMYVYFYDIENKLP 181 (404)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCchhc
Confidence 99999999999999999999986543
No 10
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=2e-34 Score=243.51 Aligned_cols=158 Identities=18% Similarity=0.200 Sum_probs=131.9
Q ss_pred cceEEEeCCCCCCchhHHHHHhhcccCceeeeCc----hhHHhhcCCCeE-Eec-CCCCCHH-HHhcCC--CCeEEEEcC
Q 044056 16 ITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFF----LSMHSLYASYGT-SEQ-MIASDSN-VITRAN--PMNLIIRFR 86 (189)
Q Consensus 16 ~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~adv-i~~-~~~~~~~-~l~~~p--~Lk~I~~~~ 86 (189)
||||+++... +...+++.++++.+ ++++...+ +++.+.++++|+ ++. ..+++++ +|+++| +||||++.|
T Consensus 1 Mmki~~~~~~-~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~ 78 (343)
T 2yq5_A 1 MTKIAMYNVS-PIEVPYIEDWAKKN-DVEIKTTDQALTSATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRI 78 (343)
T ss_dssp -CEEEEESCC-GGGHHHHHHHHHHH-TCEEEEESSCCSTTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESS
T ss_pred CceEEEEecC-cccHHHHHHHHHhC-CeEEEECCCCCCHHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECc
Confidence 6999999954 45556666766554 55554432 266788999999 554 5789999 999985 699999999
Q ss_pred CCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------------CCCCCCCCCCEEEEEc
Q 044056 87 VGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------------VPTGETLLGKTVFISG 150 (189)
Q Consensus 87 aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------------~~~~~~l~gktvGIvG 150 (189)
+|+|+||+++++++||.|+|+||+ ++++||||+++++|++.|+++ ...+.+|+||||||||
T Consensus 79 ~G~d~id~~~~~~~gI~v~n~p~~---~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiG 155 (343)
T 2yq5_A 79 VGFNTINFDWTKKYNLLVTNVPVY---SPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIG 155 (343)
T ss_dssp SCCTTBCSSTTCC--CEEECCSCS---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEEC
T ss_pred eeecccchhHHHhCCEEEEECCCC---CcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEe
Confidence 999999999999999999999999 889999999999999999875 1236789999999999
Q ss_pred CCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 151 FGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 151 ~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+|+||+.+|+++++|||+|++|||++++
T Consensus 156 lG~IG~~vA~~l~~~G~~V~~~d~~~~~ 183 (343)
T 2yq5_A 156 VGHIGSAVAEIFSAMGAKVIAYDVAYNP 183 (343)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCG
T ss_pred cCHHHHHHHHHHhhCCCEEEEECCChhh
Confidence 9999999999999999999999999764
No 11
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=1.7e-33 Score=237.32 Aligned_cols=159 Identities=13% Similarity=0.124 Sum_probs=131.0
Q ss_pred cceEEEeCCCCCCchhHHHHHhhcccCceeeeCc---h-hHHhhcCCCeE-Eec-CCCCCHHHHhcCCC--CeEEEEcCC
Q 044056 16 ITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFF---L-SMHSLYASYGT-SEQ-MIASDSNVITRANP--MNLIIRFRV 87 (189)
Q Consensus 16 ~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~-~~~~~~~~adv-i~~-~~~~~~~~l~~~p~--Lk~I~~~~a 87 (189)
||||+++... +...+++..+.+.+|++++...+ . ++.+.++++|+ +++ ..++++++++++|+ ||||++.|+
T Consensus 1 mmkil~~~~~-~~~~~~~~~l~~~~p~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~ 79 (333)
T 1j4a_A 1 MTKIFAYAIR-EDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYIAETLQALADNGITKMSLRNV 79 (333)
T ss_dssp -CEEEECSCC-GGGHHHHHHHHHTCTTSEEEECSSCCCTTTGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSS
T ss_pred CcEEEEEecC-ccCHHHHHHHHhhCCCcEEEECCCCCcHHHHHHhcCCcEEEEcCCCCCCHHHHHhccccCCeEEEECCc
Confidence 4789887653 22233333433445566664432 2 56677899999 654 46899999999987 999999999
Q ss_pred CCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC--------------CCCCCCCCCCEEEEEcCCH
Q 044056 88 GLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI--------------VPTGETLLGKTVFISGFGN 153 (189)
Q Consensus 88 G~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~--------------~~~~~~l~gktvGIvG~G~ 153 (189)
|+||||+++++++||.|+|+||+ ++++||||+++++|++.|+++ ...+.++.|+||||||+|+
T Consensus 80 G~d~id~~~~~~~gi~v~n~p~~---~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~ 156 (333)
T 1j4a_A 80 GVDNIDMAKAKELGFQITNVPVY---SPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGH 156 (333)
T ss_dssp CCTTBCHHHHHHTTCEEECCCCS---CHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSH
T ss_pred ccccccHHHHHhCCCEEEeCCCC---CchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCH
Confidence 99999999999999999999998 889999999999999999987 1245789999999999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 154 IGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 154 IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
||+.+|+++++|||+|++|||+..+
T Consensus 157 IG~~~A~~l~~~G~~V~~~d~~~~~ 181 (333)
T 1j4a_A 157 IGQVFMQIMEGFGAKVITYDIFRNP 181 (333)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHHHHHCCCEEEEECCCcch
Confidence 9999999999999999999998764
No 12
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-33 Score=236.07 Aligned_cols=157 Identities=25% Similarity=0.298 Sum_probs=129.8
Q ss_pred CCcceEEEeCCCCCCchhHHHHHhhcccCceeeeC---ch-hHHhhcCCCeE-Eec-CCCCCHHHHhcCCCCeEEEEcCC
Q 044056 14 KSITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF---FL-SMHSLYASYGT-SEQ-MIASDSNVITRANPMNLIIRFRV 87 (189)
Q Consensus 14 ~~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~-~~~~~~~~adv-i~~-~~~~~~~~l~~~p~Lk~I~~~~a 87 (189)
+.|++|+++++..+. ..+.++.. ++++... +. ++.+.++++|+ +++ ..++++++++++|+||||++.|+
T Consensus 24 ~~~~~vli~~~~~~~----~~~~l~~~-~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~I~~~~~ 98 (335)
T 2g76_A 24 ANLRKVLISDSLDPC----CRKILQDG-GLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGT 98 (335)
T ss_dssp --CCEEEECSCCCHH----HHHHHHHH-TCEEEECCSCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHCSSCCEEEESSS
T ss_pred ccceEEEEcCCCCHH----HHHHHHhC-CCEEEECCCCCHHHHHHHhcCceEEEEcCCCCCCHHHHhhCCCCcEEEECCC
Confidence 456789988775433 23444443 2333322 23 67788899999 554 35799999999999999999999
Q ss_pred CCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C----CCCCCCCCCEEEEEcCCH
Q 044056 88 GLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V----PTGETLLGKTVFISGFGN 153 (189)
Q Consensus 88 G~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~----~~~~~l~gktvGIvG~G~ 153 (189)
|+|+||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..+.++.|+||||||+|.
T Consensus 99 G~d~id~~~~~~~gI~v~n~p~~---~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~ 175 (335)
T 2g76_A 99 GVDNVDLEAATRKGILVMNTPNG---NSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGR 175 (335)
T ss_dssp SCTTBCHHHHHHHTCEEECCSST---THHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSH
T ss_pred CcchhChHHHHhCCeEEEECCCc---cchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECH
Confidence 99999999999999999999998 899999999999999999986 1 235799999999999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 154 IGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 154 IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
||+.+|+++++|||+|++|||+..+
T Consensus 176 IG~~vA~~l~~~G~~V~~~d~~~~~ 200 (335)
T 2g76_A 176 IGREVATRMQSFGMKTIGYDPIISP 200 (335)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSSCH
T ss_pred HHHHHHHHHHHCCCEEEEECCCcch
Confidence 9999999999999999999998654
No 13
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=5e-33 Score=232.07 Aligned_cols=155 Identities=25% Similarity=0.294 Sum_probs=129.7
Q ss_pred cceEEEeCCCCCCchhHHHHHhhcccCceeeeC---ch-hHHhhcCCCeE-EecCC-CCCHHHHhcCCCCeEEEEcCCCC
Q 044056 16 ITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF---FL-SMHSLYASYGT-SEQMI-ASDSNVITRANPMNLIIRFRVGL 89 (189)
Q Consensus 16 ~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~-~~~~~~~~adv-i~~~~-~~~~~~l~~~p~Lk~I~~~~aG~ 89 (189)
||||+++++..+.. .+.++.. ++++... +. ++.+.++++|+ +++.. ++++++++++|+||||++.|+|+
T Consensus 3 ~~~il~~~~~~~~~----~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~ 77 (307)
T 1wwk_A 3 RMKVLVAAPLHEKA----IQVLKDA-GLEVIYEEYPDEDRLVELVKDVEAIIVRSKPKVTRRVIESAPKLKVIARAGVGL 77 (307)
T ss_dssp -CEEEECSCCCHHH----HHHHHHT-TCEEEECSSCCHHHHHHHSTTCSEEEESSCSCBCHHHHTTCTTCCEEEESSSCC
T ss_pred ceEEEEeCCCCHHH----HHHHHhC-CeEEEeCCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCeEEEECCccc
Confidence 58999988653322 3444442 4454332 23 67788899999 55543 69999999999999999999999
Q ss_pred CcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C----CCCCCCCCCEEEEEcCCHHH
Q 044056 90 EGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V----PTGETLLGKTVFISGFGNIG 155 (189)
Q Consensus 90 d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~----~~~~~l~gktvGIvG~G~IG 155 (189)
|+||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..+.++.|+||||||+|+||
T Consensus 78 d~id~~~~~~~gi~v~n~~g~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG 154 (307)
T 1wwk_A 78 DNIDVEAAKEKGIEVVNAPAA---SSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIG 154 (307)
T ss_dssp TTBCHHHHHHHTCEEECCGGG---GHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHH
T ss_pred cccCHHHHHhCCcEEEECCCC---ChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHH
Confidence 999999999999999999999 899999999999999999986 1 34579999999999999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCC
Q 044056 156 VELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 156 ~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+.+|+++++|||+|++|||++.+
T Consensus 155 ~~~A~~l~~~G~~V~~~d~~~~~ 177 (307)
T 1wwk_A 155 YQVAKIANALGMNILLYDPYPNE 177 (307)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHHHCCCEEEEECCCCCh
Confidence 99999999999999999998764
No 14
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=4.5e-33 Score=236.82 Aligned_cols=161 Identities=16% Similarity=0.161 Sum_probs=125.0
Q ss_pred CcceEEEeCCCCCCc----hhHHHHHhhcccCceeeeC-ch-hHH-hhcCCCeEEecCCCCCHHHHhcCCCCeEEEEc-C
Q 044056 15 SITLVLFRGPHFPAS----HNYAKGYLQNYLSIKGLCF-FL-SMH-SLYASYGTSEQMIASDSNVITRANPMNLIIRF-R 86 (189)
Q Consensus 15 ~~~~ilv~~~~~~~~----~~~~~~~l~~~~~~~~~~~-~~-~~~-~~~~~advi~~~~~~~~~~l~~~p~Lk~I~~~-~ 86 (189)
..++++++.+..... .+...+.|+...++..... +. ++. +.+.++|+++...++++++|+++|+||||++. +
T Consensus 26 ~~r~ivll~~~~~~~~~~~~~~~~~~L~~~~~v~~~~~~~~~e~~~~~~~~~~~i~~~~~i~~~~l~~~p~Lk~I~~~~~ 105 (365)
T 4hy3_A 26 TERPLAISAPEPRSLDLIFSDEARAALHSKYEIVEADPENIAGLGDDILGRARYIIGQPPLSAETLARMPALRSILNVES 105 (365)
T ss_dssp --CCEEEEECTTSCHHHHCCHHHHHHHHHHSEEEECCGGGGGGSCTTHHHHEEEEEECCCCCHHHHTTCTTCCEEECCSS
T ss_pred CCCCEEEEcCCcccccccCCHHHHHHHhCCcEEEECCCCChHHHHHHhhCCeEEEEeCCCCCHHHHhhCCCCeEEEEecc
Confidence 345777777664321 1122344544433332111 11 332 33456777556679999999999999999975 8
Q ss_pred CCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC---------C--------CCCCCCCCCEEEEE
Q 044056 87 VGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI---------V--------PTGETLLGKTVFIS 149 (189)
Q Consensus 87 aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~---------~--------~~~~~l~gktvGIv 149 (189)
+|+|+||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..+.+|+|||||||
T Consensus 106 ~G~d~iD~~~a~~~GI~V~n~~~~---~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGII 182 (365)
T 4hy3_A 106 NLLNNMPYEVLFQRGIHVVTTGQV---FAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIV 182 (365)
T ss_dssp SCCSCSCTTHHHHSCCEEEECGGG---GHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEE
T ss_pred cccCcccHHHHhcCCeEEEeCCCc---cchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEe
Confidence 999999999999999999999999 899999999999999999997 1 24579999999999
Q ss_pred cCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 150 GFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 150 G~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
|+|+||+.+|+++++|||+|++|||+.++
T Consensus 183 GlG~IG~~vA~~l~~fG~~V~~~d~~~~~ 211 (365)
T 4hy3_A 183 GFGDLGKALRRVLSGFRARIRVFDPWLPR 211 (365)
T ss_dssp CCSHHHHHHHHHHTTSCCEEEEECSSSCH
T ss_pred cCCcccHHHHHhhhhCCCEEEEECCCCCH
Confidence 99999999999999999999999998643
No 15
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.9e-32 Score=229.73 Aligned_cols=156 Identities=26% Similarity=0.276 Sum_probs=129.9
Q ss_pred cceEEEeCCCCCCchhHHHHHhhcccCceeeeC----ch-hHHhhcCCCeE-EecC-CCCCHHHHhcCCC-CeEEEEcCC
Q 044056 16 ITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF----FL-SMHSLYASYGT-SEQM-IASDSNVITRANP-MNLIIRFRV 87 (189)
Q Consensus 16 ~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~-~~~~~~~~adv-i~~~-~~~~~~~l~~~p~-Lk~I~~~~a 87 (189)
|++|+++.+..+. ..+.++...++++... +. ++.+.++++|+ +++. .++++++++++|+ ||||++.|+
T Consensus 1 m~~vl~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~Lk~I~~~~~ 76 (320)
T 1gdh_A 1 KKKILITWPLPEA----AMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSI 76 (320)
T ss_dssp CCEEEESSCCCHH----HHHHHHTTSEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEEEESS
T ss_pred CcEEEEcCCCCHH----HHHHHHhcCCEEEecCCCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHHhCCccceEEEECCc
Confidence 4688888765332 2344544335554332 22 67788899999 5544 5899999999999 999999999
Q ss_pred CCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C-------CCCCCCCCCEEEEEc
Q 044056 88 GLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V-------PTGETLLGKTVFISG 150 (189)
Q Consensus 88 G~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~-------~~~~~l~gktvGIvG 150 (189)
|+||||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..+.++.|+||||||
T Consensus 77 G~d~id~~~~~~~gi~v~n~p~~---~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG 153 (320)
T 1gdh_A 77 GFDHIDLDACKARGIKVGNAPHG---VTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYG 153 (320)
T ss_dssp CCTTBCHHHHHHTTCEEECCCCS---CHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEEC
T ss_pred ccccccHHHHHhCCcEEEEcCCC---CHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEEC
Confidence 99999999999999999999999 899999999999999999986 1 135689999999999
Q ss_pred CCHHHHHHHHHHccCCCEEEEEcC-CCCC
Q 044056 151 FGNIGVELAKRLRPFGVKIIAAKR-SWAS 178 (189)
Q Consensus 151 ~G~IG~~vA~~l~afG~~V~~~~r-~~~~ 178 (189)
+|+||+.+|+++++|||+|++||| ++.+
T Consensus 154 ~G~IG~~~A~~l~~~G~~V~~~d~~~~~~ 182 (320)
T 1gdh_A 154 FGSIGQALAKRAQGFDMDIDYFDTHRASS 182 (320)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEECSSCCCH
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCcCh
Confidence 999999999999999999999999 7654
No 16
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=1.4e-32 Score=231.70 Aligned_cols=163 Identities=21% Similarity=0.240 Sum_probs=130.3
Q ss_pred CCCCcceEEEeCCCCCCchhHHHHHhhcccCceeeeC--ch-h-HHhhcCCCeE-Ee-cCCCCCHHHHhcCCCCeEEEEc
Q 044056 12 SDKSITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF--FL-S-MHSLYASYGT-SE-QMIASDSNVITRANPMNLIIRF 85 (189)
Q Consensus 12 ~~~~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~-~-~~~~~~~adv-i~-~~~~~~~~~l~~~p~Lk~I~~~ 85 (189)
+.|++++|+++++..+. ..+.++...++..... +. + +.+.++++|+ ++ +..++++++++++|+||||++.
T Consensus 19 ~~m~~~~vl~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~p~Lk~I~~~ 94 (333)
T 3ba1_A 19 SHMEAIGVLMMCPMSTY----LEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDALPKLEIVSSF 94 (333)
T ss_dssp ---CCCEEEECSCCCHH----HHHHHHHHSEEEEGGGCSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHCTTCCEEEES
T ss_pred ccCCCCEEEEeCCCCHH----HHHHHHhcCCEEEecCCCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhCCCCcEEEEc
Confidence 33556789998765432 2334443323332211 12 3 5566789999 54 3467999999999999999999
Q ss_pred CCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C-----CCCCCCCCCEEEEEc
Q 044056 86 RVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V-----PTGETLLGKTVFISG 150 (189)
Q Consensus 86 ~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~-----~~~~~l~gktvGIvG 150 (189)
|+|+|+||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..+.+++|+||||||
T Consensus 95 ~~G~d~id~~~~~~~gI~v~n~pg~---~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG 171 (333)
T 3ba1_A 95 SVGLDKVDLIKCEEKGVRVTNTPDV---LTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIG 171 (333)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCCST---THHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEEC
T ss_pred CccccccCHHHHHhCCcEEEECCCc---chHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEEC
Confidence 9999999999999999999999999 899999999999999999987 1 235799999999999
Q ss_pred CCHHHHHHHHHHccCCCEEEEEcCCCCCccc
Q 044056 151 FGNIGVELAKRLRPFGVKIIAAKRSWASHSQ 181 (189)
Q Consensus 151 ~G~IG~~vA~~l~afG~~V~~~~r~~~~~~~ 181 (189)
+|+||+++|+++++|||+|++|||++.+..+
T Consensus 172 ~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~g 202 (333)
T 3ba1_A 172 LGRIGLAVAERAEAFDCPISYFSRSKKPNTN 202 (333)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEECSSCCTTCC
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCchhccC
Confidence 9999999999999999999999998766433
No 17
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.6e-32 Score=231.35 Aligned_cols=158 Identities=19% Similarity=0.215 Sum_probs=128.7
Q ss_pred ceEEEeCCCCCCchhHHHHHhhcccCceeeeCc---h-hHHhhcCCCeE-Eec-CCCCCHHHHhcCCC--CeEEEEcCCC
Q 044056 17 TLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFF---L-SMHSLYASYGT-SEQ-MIASDSNVITRANP--MNLIIRFRVG 88 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~-~~~~~~~~adv-i~~-~~~~~~~~l~~~p~--Lk~I~~~~aG 88 (189)
|||+++.... ....++..+.+.+ ++++...+ . ++.+.++++|+ +++ ..++++++++++|+ ||||++.|+|
T Consensus 1 Mkil~~~~~~-~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G 78 (333)
T 1dxy_A 1 MKIIAYGARV-DEIQYFKQWAKDT-GNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVG 78 (333)
T ss_dssp CEEEECSCCT-TTHHHHHHHHHHH-CCEEEECSSCCCTTGGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSC
T ss_pred CEEEEEeccc-cCHHHHHHHHHhC-CeEEEEcCCCChHHHHHHhcCCeEEEEcCCCCCCHHHHHhCcccCceEEEEcCcc
Confidence 5788875432 2233333333333 44443322 2 56677899999 554 46899999999987 9999999999
Q ss_pred CCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC---------------CCCCCCCCCCEEEEEcCCH
Q 044056 89 LEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI---------------VPTGETLLGKTVFISGFGN 153 (189)
Q Consensus 89 ~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~---------------~~~~~~l~gktvGIvG~G~ 153 (189)
+||||+++++++||.|+|+||+ ++++||||+++++|++.|+++ ...+.++.|+||||||+|+
T Consensus 79 ~d~id~~~~~~~gI~v~n~p~~---~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~ 155 (333)
T 1dxy_A 79 TDNIDMTAMKQYGIRLSNVPAY---SPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGH 155 (333)
T ss_dssp CTTBCHHHHHHTTCEEECCTTS---CHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSH
T ss_pred cCccCHHHHHhCCCEEEeCCCC---CchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCH
Confidence 9999999999999999999998 889999999999999999986 1245799999999999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 154 IGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 154 IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
||+.+|+++++|||+|++|||+..+.
T Consensus 156 IG~~~A~~l~~~G~~V~~~d~~~~~~ 181 (333)
T 1dxy_A 156 IGQVAIKLFKGFGAKVIAYDPYPMKG 181 (333)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCSS
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchh
Confidence 99999999999999999999987653
No 18
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=2.5e-32 Score=228.26 Aligned_cols=156 Identities=22% Similarity=0.273 Sum_probs=129.4
Q ss_pred ceEEEeCCCCCCchhHHHHHhhcc-cCceeeeC---ch-hHHhhcCCCeE-EecC-CCCCHHHHhcCCCCeEEEEcCCCC
Q 044056 17 TLVLFRGPHFPASHNYAKGYLQNY-LSIKGLCF---FL-SMHSLYASYGT-SEQM-IASDSNVITRANPMNLIIRFRVGL 89 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~~~~~l~~~-~~~~~~~~---~~-~~~~~~~~adv-i~~~-~~~~~~~l~~~p~Lk~I~~~~aG~ 89 (189)
|||+++.+..+... +.++.. .++++... +. ++.+.++++|+ +.+. .++++++++++|+||||++.|+|+
T Consensus 1 ~~vl~~~~~~~~~~----~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~i~~~~~G~ 76 (311)
T 2cuk_A 1 MRVLVTRTLPGKAL----DRLRERGLEVEVHRGLFLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRAKGLKVIACYSVGV 76 (311)
T ss_dssp CEEEESSCCSSSTT----HHHHHTTCEEEECCSSCCCHHHHHHHHTTCSEEECCTTSCBCHHHHHHSTTCCEEECSSSCC
T ss_pred CEEEEeCCCCHHHH----HHHHhcCCeEEEecCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcCc
Confidence 57888877654432 333332 24433322 22 67788899999 5443 479999999999999999999999
Q ss_pred CcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C-------CCCCCCCCCEEEEEcCC
Q 044056 90 EGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V-------PTGETLLGKTVFISGFG 152 (189)
Q Consensus 90 d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~-------~~~~~l~gktvGIvG~G 152 (189)
||||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..+.++.|+||||||+|
T Consensus 77 d~id~~~~~~~gi~v~n~~~~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G 153 (311)
T 2cuk_A 77 DHVDLEAARERGIRVTHTPGV---LTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMG 153 (311)
T ss_dssp TTBCHHHHHTTTCEEECCCST---THHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCS
T ss_pred cccCHHHHHhCCcEEEECCCC---ChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEEC
Confidence 999999999999999999999 899999999999999999986 1 12578999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 153 NIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 153 ~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
+||+.+|+++++|||+|++|||+..+.
T Consensus 154 ~IG~~~A~~l~~~G~~V~~~d~~~~~~ 180 (311)
T 2cuk_A 154 RIGQAVAKRALAFGMRVVYHARTPKPL 180 (311)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCCSS
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCccc
Confidence 999999999999999999999987654
No 19
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=3.2e-32 Score=227.75 Aligned_cols=155 Identities=24% Similarity=0.302 Sum_probs=130.2
Q ss_pred cceEEEeCCCCCCchhHHHHHhhcccCceeeeC---ch-hHHhhcCCCeE-Ee-cCCCCCHHHHhcCCCCeEEEEcCCCC
Q 044056 16 ITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF---FL-SMHSLYASYGT-SE-QMIASDSNVITRANPMNLIIRFRVGL 89 (189)
Q Consensus 16 ~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~-~~~~~~~~adv-i~-~~~~~~~~~l~~~p~Lk~I~~~~aG~ 89 (189)
+|||+++++..+. ..+.++.. ++++... +. ++.+.++++|+ ++ +..++++++++++|+||||++.|+|+
T Consensus 5 ~mkil~~~~~~~~----~~~~l~~~-~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~ 79 (313)
T 2ekl_A 5 TVKALITDPIDEI----LIKTLREK-GIQVDYMPEISKEELLNIIGNYDIIVVRSRTKVTKDVIEKGKKLKIIARAGIGL 79 (313)
T ss_dssp CCEEEECSCCCHH----HHHHHHHT-TCEEEECTTCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHCTTCCEEEECSSCC
T ss_pred ceEEEEECCCCHH----HHHHHHhC-CcEEEeCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEEcCCCC
Confidence 4789998865332 23444442 3444322 23 67788899999 55 35679999999999999999999999
Q ss_pred CcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC------------CCCCCCCCCCEEEEEcCCHHHHH
Q 044056 90 EGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI------------VPTGETLLGKTVFISGFGNIGVE 157 (189)
Q Consensus 90 d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~------------~~~~~~l~gktvGIvG~G~IG~~ 157 (189)
|++|+++++++||.|+|+||+ ++++||||+++++|++.|+++ ...+.++.|+||||||+|+||+.
T Consensus 80 d~id~~~~~~~gi~v~n~~g~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~ 156 (313)
T 2ekl_A 80 DNIDTEEAEKRNIKVVYAPGA---STDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTK 156 (313)
T ss_dssp TTBCHHHHHHTTCEEECCTTT---THHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHH
T ss_pred CccCHHHHHhCCeEEEeCCCC---CchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHH
Confidence 999999999999999999999 899999999999999999987 23467999999999999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCC
Q 044056 158 LAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 158 vA~~l~afG~~V~~~~r~~~~ 178 (189)
+|+++++|||+|++|||++++
T Consensus 157 ~A~~l~~~G~~V~~~d~~~~~ 177 (313)
T 2ekl_A 157 VGIIANAMGMKVLAYDILDIR 177 (313)
T ss_dssp HHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHCCCEEEEECCCcch
Confidence 999999999999999998764
No 20
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=2.1e-32 Score=228.99 Aligned_cols=157 Identities=15% Similarity=0.192 Sum_probs=130.2
Q ss_pred ceEEEeCCCCCCchhHHHHHhhcccCceeeeCchhHHhhcCCCeE-EecCCCCCHHHHhcCCCCeEEEEcCCCCCcC-C-
Q 044056 17 TLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFFLSMHSLYASYGT-SEQMIASDSNVITRANPMNLIIRFRVGLEGV-D- 93 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~adv-i~~~~~~~~~~l~~~p~Lk~I~~~~aG~d~i-d- 93 (189)
|||+++.+.. ...+|..++.+.+|++++..++.+ ..+++|+ +++. +++++++. |+||||++.|+|+||| |
T Consensus 4 mkil~~~~~~-~~~~~~~~l~~~~p~~~~~~~~~~---~~~~ad~~i~~~--~~~~~l~~-~~Lk~I~~~~aG~d~i~d~ 76 (315)
T 3pp8_A 4 MEIIFYHPTF-NAAWWVNALEKALPHARVREWKVG---DNNPADYALVWQ--PPVEMLAG-RRLKAVFVLGAGVDAILSK 76 (315)
T ss_dssp EEEEEECSSS-CHHHHHHHHHHHSTTEEEEECCTT---CCSCCSEEEESS--CCHHHHTT-CCCSEEEESSSCCHHHHHH
T ss_pred eEEEEEcCCC-chHHHHHHHHHHCCCCEEEecCCC---CccCcEEEEECC--CCHHHhCC-CCceEEEECCEecccccch
Confidence 8999988764 334566666677889888766532 3468998 6654 68999999 9999999999999999 7
Q ss_pred hhH---HhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC------------CCCCCCCCCCEEEEEcCCHHHHHH
Q 044056 94 IDA---LTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI------------VPTGETLLGKTVFISGFGNIGVEL 158 (189)
Q Consensus 94 ~~~---~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~------------~~~~~~l~gktvGIvG~G~IG~~v 158 (189)
+++ +.++||+|+|++++ +++++||||+++++|++.|+++ ...+.+++|+||||||+|+||+++
T Consensus 77 ~~a~~~~~~~gi~v~~~~~~--~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~v 154 (315)
T 3pp8_A 77 LNAHPEMLDASIPLFRLEDT--GMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKV 154 (315)
T ss_dssp HHHCTTSSCTTSCEEEC--C--CCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHH
T ss_pred hhhhhhhhcCCCEEEEcCCC--CccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHH
Confidence 876 78899999999987 3579999999999999999987 235689999999999999999999
Q ss_pred HHHHccCCCEEEEEcCCCCCcccc
Q 044056 159 AKRLRPFGVKIIAAKRSWASHSQV 182 (189)
Q Consensus 159 A~~l~afG~~V~~~~r~~~~~~~~ 182 (189)
|+++++|||+|++|||++++.++.
T Consensus 155 A~~l~~~G~~V~~~dr~~~~~~~~ 178 (315)
T 3pp8_A 155 AESLQAWGFPLRCWSRSRKSWPGV 178 (315)
T ss_dssp HHHHHTTTCCEEEEESSCCCCTTC
T ss_pred HHHHHHCCCEEEEEcCCchhhhhh
Confidence 999999999999999988765443
No 21
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.98 E-value=1.6e-32 Score=234.13 Aligned_cols=150 Identities=19% Similarity=0.228 Sum_probs=125.7
Q ss_pred CcceEEEeCCCCCCchhHHHHHhhcccCceeeeCchhHHhhcCCCeE-Eec-CCCCCHHHHhcCCCCeEEEEcCCCCCcC
Q 044056 15 SITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFFLSMHSLYASYGT-SEQ-MIASDSNVITRANPMNLIIRFRVGLEGV 92 (189)
Q Consensus 15 ~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~adv-i~~-~~~~~~~~l~~~p~Lk~I~~~~aG~d~i 92 (189)
.||||++.+..+ . ..++++.+.++.+........+.++++|+ +++ .+++++++++ .++||||++.++|+|||
T Consensus 2 ~mmkIl~~~~~p-~----~~~~~~~~~~v~~~~~~~~~~~~l~~ad~li~~~~~~v~~~ll~-~~~Lk~I~~~~~G~D~i 75 (381)
T 3oet_A 2 NAMKILVDENMP-Y----ARELFSRLGEVKAVPGRPIPVEELNHADALMVRSVTKVNESLLS-GTPINFVGTATAGTDHV 75 (381)
T ss_dssp CCCEEEEETTST-T----HHHHHTTSSEEEEECC---CHHHHTTCSEEEECTTSCBSHHHHT-TSCCCEEEESSSCCTTB
T ss_pred CceEEEECCCCc-H----HHHHHhhCCcEEEeCCCCCCHHHHCCCEEEEECCCCCCCHHHHc-CCCCEEEEEcccccccc
Confidence 369999987763 2 34666666555544322222456899999 665 3579999999 67799999999999999
Q ss_pred ChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEE
Q 044056 93 DIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAA 172 (189)
Q Consensus 93 d~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~ 172 (189)
|++++.++||.|+|+||+ ++.+||||+++++|++.|+ .+.+++||||||||+|+||+.+|+++++|||+|++|
T Consensus 76 D~~~~~~~gI~v~n~pg~---~~~~VAE~~l~~lL~l~r~----~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~ 148 (381)
T 3oet_A 76 DEAWLKQAGIGFSAAPGC---NAIAVVEYVFSALLMLAER----DGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLC 148 (381)
T ss_dssp CHHHHHHTTCEEECCTTT---THHHHHHHHHHHHHHHHHH----TTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHhCCEEEEECCCc---CcchhHHHHHHHHHHHHHh----cCCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEE
Confidence 999999999999999999 9999999999999999998 468999999999999999999999999999999999
Q ss_pred cCCCC
Q 044056 173 KRSWA 177 (189)
Q Consensus 173 ~r~~~ 177 (189)
||+..
T Consensus 149 d~~~~ 153 (381)
T 3oet_A 149 DPPRA 153 (381)
T ss_dssp CHHHH
T ss_pred CCChH
Confidence 98643
No 22
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.98 E-value=7.4e-32 Score=228.54 Aligned_cols=125 Identities=24% Similarity=0.361 Sum_probs=114.4
Q ss_pred hHHhhcCCCeE-EecC---CCCCHHHHhcCCCCeEEEEcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHH
Q 044056 51 SMHSLYASYGT-SEQM---IASDSNVITRANPMNLIIRFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLM 126 (189)
Q Consensus 51 ~~~~~~~~adv-i~~~---~~~~~~~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~li 126 (189)
++.+.++++|+ +... .++++++++++|+||||++.|+|+||||++++.++||.|+|+||+ ++.+||||+++++
T Consensus 55 ~~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d~id~~~a~~~gI~V~n~~g~---~~~~vAE~~~~l~ 131 (351)
T 3jtm_A 55 ELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGS---NVVSVAEDELMRI 131 (351)
T ss_dssp HHHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCTTBCHHHHHHTTCEEEECTTT---THHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeecccCHHHHHhcCeeEEECCCc---CchHHHHHHHHHH
Confidence 67888999999 5532 358999999999999999999999999999999999999999999 8999999999999
Q ss_pred HHHHhcCC----------C------CCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 127 LGLLRKHI----------V------PTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 127 L~~~R~~~----------~------~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
|++.|++. . ..+.+|+|+||||||+|+||+.+|++|++|||+|++|||++.+
T Consensus 132 L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~ 199 (351)
T 3jtm_A 132 LILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMA 199 (351)
T ss_dssp HHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCC
T ss_pred HHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccC
Confidence 99999987 1 2467999999999999999999999999999999999998643
No 23
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.98 E-value=8.7e-32 Score=228.24 Aligned_cols=156 Identities=19% Similarity=0.182 Sum_probs=127.8
Q ss_pred ceEEEeCCCCCCchhH-HHHHhhcccCceeeeC---ch-hHHhhcCCCeE-Eec--CCCCCHHHHhcCCCCeEEEEcCCC
Q 044056 17 TLVLFRGPHFPASHNY-AKGYLQNYLSIKGLCF---FL-SMHSLYASYGT-SEQ--MIASDSNVITRANPMNLIIRFRVG 88 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~-~~~~l~~~~~~~~~~~---~~-~~~~~~~~adv-i~~--~~~~~~~~l~~~p~Lk~I~~~~aG 88 (189)
|||++++......... ..+.++. .++++... +. ++.+.++++|+ +++ ..++++++++++|+||+|++.|+|
T Consensus 3 mki~~~d~~~~~~~~~~~~~~l~~-~~v~~~~~~~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~~~Lk~I~~~g~G 81 (352)
T 3gg9_A 3 LKIAVLDDYQDAVRKLDCFSLLQD-HEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRLPKLKIISQTGRV 81 (352)
T ss_dssp CEEEECCCTTCCGGGSGGGGGGTT-SEEEECCSCCCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTCTTCCEEEESSCC
T ss_pred eEEEEEcCccccchhhhhhhhhcC-ceEEEecCCCCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhCCCCeEEEEeCcc
Confidence 8999998875432110 0122333 23444332 22 67888999999 553 478999999999999999999999
Q ss_pred C----CcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC------------C------------CCCCC
Q 044056 89 L----EGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI------------V------------PTGET 140 (189)
Q Consensus 89 ~----d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~------------~------------~~~~~ 140 (189)
+ |+||+++++++||.|+|+||+ + ++||||+++++|++.|+++ . ..+.+
T Consensus 82 ~~~~~d~id~~~a~~~gI~V~n~pg~-~---~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~ 157 (352)
T 3gg9_A 82 SRDAGGHIDLEACTDKGVVVLEGKGS-P---VAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRV 157 (352)
T ss_dssp CCSSSCSBCHHHHHHHTCEEECCCCC-S---HHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCC
T ss_pred cCCccCcccHHHHHhCCeEEEECCCC-c---HHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCcc
Confidence 9 999999999999999999997 3 8999999999999999987 1 13679
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
|+||||||||+|.||+++|+++++|||+|++|||+.+
T Consensus 158 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~ 194 (352)
T 3gg9_A 158 LKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENS 194 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHH
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCC
Confidence 9999999999999999999999999999999999853
No 24
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.98 E-value=7.6e-32 Score=227.02 Aligned_cols=158 Identities=15% Similarity=0.140 Sum_probs=128.6
Q ss_pred ceEEEeCCCCCCchhHHHHHhhcccCceeeeC----ch-hHHhhcCCCeE-Eec-CCCCCHHHHhcCCC--CeEEEEcCC
Q 044056 17 TLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF----FL-SMHSLYASYGT-SEQ-MIASDSNVITRANP--MNLIIRFRV 87 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~-~~~~~~~~adv-i~~-~~~~~~~~l~~~p~--Lk~I~~~~a 87 (189)
|||+++.... ...+++..+.+.+ ++++... +. ++.+.++++|+ +++ ..++++++++++|+ ||||++.|+
T Consensus 1 mki~~~~~~~-~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~ 78 (331)
T 1xdw_A 1 MKVLCYGVRD-VELPIFEACNKEF-GYDIKCVPDYLNTKETAEMAAGFDAVILRGNCFANKQNLDIYKKLGVKYILTRTA 78 (331)
T ss_dssp CEEEECSCCT-TTHHHHHHHGGGT-CCEEEECSCCSCSHHHHHTTTTCSEEEECTTCCBCHHHHHHHHHHTCCEEEESSS
T ss_pred CEEEEEecCc-cCHHHHHHHHHhc-CeEEEECCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHhhCcccCceEEEEccc
Confidence 5888875432 2223333333333 4444332 22 56788899999 554 46899999999998 999999999
Q ss_pred CCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C-----CCCCCCCCCEEEEEcCC
Q 044056 88 GLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V-----PTGETLLGKTVFISGFG 152 (189)
Q Consensus 88 G~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~-----~~~~~l~gktvGIvG~G 152 (189)
|+||||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..+.++.|+||||||+|
T Consensus 79 G~d~id~~~~~~~gI~v~n~p~~---~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G 155 (331)
T 1xdw_A 79 GTDHIDKEYAKELGFPMAFVPRY---SPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLG 155 (331)
T ss_dssp CCTTBCHHHHHHTTCCEECCCCC---CHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCS
T ss_pred cccccCHHHHHhCCcEEEeCCCC---CcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcC
Confidence 99999999999999999999999 889999999999999999886 1 13468999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 153 NIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 153 ~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
+||+.+|+++++|||+|++|||+..+.
T Consensus 156 ~IG~~~A~~l~~~G~~V~~~d~~~~~~ 182 (331)
T 1xdw_A 156 RIGRVAAQIFHGMGATVIGEDVFEIKG 182 (331)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred HHHHHHHHHHHHCCCEEEEECCCccHH
Confidence 999999999999999999999987653
No 25
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.97 E-value=1.7e-31 Score=237.30 Aligned_cols=157 Identities=24% Similarity=0.316 Sum_probs=131.6
Q ss_pred CCcceEEEeCCCCCCchhHHHHHhhcccCceeeeC-ch-hHHhhcCCCeE-Eec-CCCCCHHHHhcCCCCeEEEEcCCCC
Q 044056 14 KSITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF-FL-SMHSLYASYGT-SEQ-MIASDSNVITRANPMNLIIRFRVGL 89 (189)
Q Consensus 14 ~~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~~~adv-i~~-~~~~~~~~l~~~p~Lk~I~~~~aG~ 89 (189)
|++|+|+++++..+.. .+.|+...++++... +. ++.+.++++|+ +++ .+++++++++++|+||||++.|+|+
T Consensus 2 m~~~~vl~~~~~~~~~----~~~l~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~i~~~~~G~ 77 (529)
T 1ygy_A 2 VSLPVVLIADKLAPST----VAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVLAAAPKLKIVARAGVGL 77 (529)
T ss_dssp -CCCEEEECSSCCGGG----GTTSCSSSEEEECCTTSHHHHHHHGGGCSEEEECSSSCBCHHHHHTCTTCCEEEESSSCC
T ss_pred CCCcEEEEeCCCCHHH----HHHHhcCceEEEcCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCcEEEECCcCc
Confidence 4568999988765432 234444333433332 23 67788999999 553 4689999999999999999999999
Q ss_pred CcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C----CCCCCCCCCEEEEEcCCHHH
Q 044056 90 EGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V----PTGETLLGKTVFISGFGNIG 155 (189)
Q Consensus 90 d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~----~~~~~l~gktvGIvG~G~IG 155 (189)
||+|+++++++||.|+|+||+ ++.+||||+++++|++.|+++ + ..+.+|+|+||||||+|+||
T Consensus 78 d~id~~~~~~~gi~v~n~p~~---~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG 154 (529)
T 1ygy_A 78 DNVDVDAATARGVLVVNAPTS---NIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIG 154 (529)
T ss_dssp TTBCHHHHHHTTCEEECCTTS---SHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHH
T ss_pred CccCHhHHHhCCeEEEECCCc---chHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHH
Confidence 999999999999999999998 999999999999999999987 1 23679999999999999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCC
Q 044056 156 VELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 156 ~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+.+|++|++|||+|++|||+..
T Consensus 155 ~~vA~~l~~~G~~V~~~d~~~~ 176 (529)
T 1ygy_A 155 QLVAQRIAAFGAYVVAYDPYVS 176 (529)
T ss_dssp HHHHHHHHTTTCEEEEECTTSC
T ss_pred HHHHHHHHhCCCEEEEECCCCC
Confidence 9999999999999999999864
No 26
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.97 E-value=2.9e-31 Score=227.71 Aligned_cols=125 Identities=21% Similarity=0.270 Sum_probs=114.0
Q ss_pred hHHhhcCCCeE-Eec---CCCCCHHHHhcCCCCeEEEEcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHH
Q 044056 51 SMHSLYASYGT-SEQ---MIASDSNVITRANPMNLIIRFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLM 126 (189)
Q Consensus 51 ~~~~~~~~adv-i~~---~~~~~~~~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~li 126 (189)
++.+.++++|+ +.. ..++++++|+++|+||||++.++|+||||+++++++||.|+|+||+ ++++||||+++++
T Consensus 82 ~l~~~l~~ad~li~~~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~~g~---~~~~VAE~al~li 158 (393)
T 2nac_A 82 VFERELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYC---NSISVAEHVVMMI 158 (393)
T ss_dssp HHHHHHTTCSEEEEBTTBCCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEEECTTT---THHHHHHHHHHHH
T ss_pred HHHHhccCCCEEEEcCccCCCCCHHHHhhCCCCcEEEEcCccccccCHHHHhcCCEEEEeCCCc---ccHHHHHHHHHHH
Confidence 57788999999 543 3479999999999999999999999999999999999999999998 8999999999999
Q ss_pred HHHHhcCC----------C------CCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 127 LGLLRKHI----------V------PTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 127 L~~~R~~~----------~------~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
|++.|++. . ..+.+|+|+||||||+|+||+++|+++++|||+|++|||+..+
T Consensus 159 L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~ 226 (393)
T 2nac_A 159 LSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLP 226 (393)
T ss_dssp HHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred HHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccc
Confidence 99999985 1 2357899999999999999999999999999999999998644
No 27
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.97 E-value=5.4e-31 Score=223.18 Aligned_cols=160 Identities=16% Similarity=0.237 Sum_probs=127.7
Q ss_pred CcceEEEeCCCCCCchhHHHHHhhcccCceeeeC-ch-hHHhhcC-----CCeE-Eec-------CCCCCHHHHhcCC-C
Q 044056 15 SITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF-FL-SMHSLYA-----SYGT-SEQ-------MIASDSNVITRAN-P 78 (189)
Q Consensus 15 ~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~~-----~adv-i~~-------~~~~~~~~l~~~p-~ 78 (189)
.|++|+++++....... ..+.++...++.+... +. ++.+.++ ++|+ +.. ..++++++|+.+| +
T Consensus 2 ~~~~vl~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~ 80 (348)
T 2w2k_A 2 PRPRVLLLGDPARHLDD-LWSDFQQKFEVIPANLTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSS 80 (348)
T ss_dssp CCCEEEECSSCCSSCHH-HHHHHHHHSEEEECCCCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSCTT
T ss_pred CCcEEEEECCccccChH-HHHHHHhcceEEecCCCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhcccC
Confidence 46799999873222111 2233443334433222 23 6666665 7888 442 3589999999998 6
Q ss_pred CeEEEEcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC---------C------------CC
Q 044056 79 MNLIIRFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI---------V------------PT 137 (189)
Q Consensus 79 Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~---------~------------~~ 137 (189)
||||++.++|+|+||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..
T Consensus 81 Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~---~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~ 157 (348)
T 2w2k_A 81 LKVFAAAGAGFDWLDLDALNERGVAFANSRGA---GDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKS 157 (348)
T ss_dssp CCEEEESSSCCTTBCHHHHHHTTCEEECCTTT---THHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTT
T ss_pred ceEEEECCccccccCHHHHHhCCcEEEECCCC---CcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCccccccccccccc
Confidence 99999999999999999999999999999999 889999999999999999986 2 13
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHc-cCCCEEEEEcCCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLR-PFGVKIIAAKRSWAS 178 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~-afG~~V~~~~r~~~~ 178 (189)
+.+|+|+||||||+|+||+.+|++++ +|||+|++|||+...
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~ 199 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPAD 199 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCC
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcc
Confidence 57899999999999999999999999 999999999998754
No 28
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.97 E-value=3.5e-31 Score=222.85 Aligned_cols=156 Identities=21% Similarity=0.212 Sum_probs=128.0
Q ss_pred CcceEEEeCCCCCCchhHHHHHhhcccCceeeeC------ch-hHHhhcCCCeE-Ee-cCCCCCHHHHhcC-CCCeEEEE
Q 044056 15 SITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF------FL-SMHSLYASYGT-SE-QMIASDSNVITRA-NPMNLIIR 84 (189)
Q Consensus 15 ~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~-~~~~~~~~adv-i~-~~~~~~~~~l~~~-p~Lk~I~~ 84 (189)
.+|+|+++.+..+. ..+.++...++++..+ +. ++.+.++++|+ ++ +..++++++++++ |+||||++
T Consensus 7 ~~~~il~~~~~~~~----~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~ 82 (330)
T 2gcg_A 7 RLMKVFVTRRIPAE----GRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVIST 82 (330)
T ss_dssp CCEEEEESSCCCHH----HHHHHHHCTTEEEEECCSSSCCCHHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEE
T ss_pred CCCEEEEECCCCHH----HHHHHHhcCCceEEEecCCCCCCHHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEE
Confidence 45789988754322 2344443322333221 22 67778899999 55 3468999999999 99999999
Q ss_pred cCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C-------CCCCCCCCCEEE
Q 044056 85 FRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V-------PTGETLLGKTVF 147 (189)
Q Consensus 85 ~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~-------~~~~~l~gktvG 147 (189)
.++|+|++|+++++++||.|+|+||+ ++++||||+++++|++.|+++ . ..+.++.|+|||
T Consensus 83 ~~~G~d~id~~~~~~~gi~v~n~~~~---~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vg 159 (330)
T 2gcg_A 83 MSVGIDHLALDEIKKRGIRVGYTPDV---LTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVG 159 (330)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCCST---THHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEE
T ss_pred CCcccccccHHHHHhCCceEEeCCCC---ChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEE
Confidence 99999999999999999999999999 899999999999999999986 1 124789999999
Q ss_pred EEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 148 ISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 148 IvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
|||+|.||+.+|+++++|||+|++|||+..
T Consensus 160 IIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 189 (330)
T 2gcg_A 160 IIGLGRIGQAIARRLKPFGVQRFLYTGRQP 189 (330)
T ss_dssp EECCSHHHHHHHHHHGGGTCCEEEEESSSC
T ss_pred EECcCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 999999999999999999999999998764
No 29
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.97 E-value=3.7e-31 Score=224.00 Aligned_cols=159 Identities=16% Similarity=0.230 Sum_probs=126.0
Q ss_pred CCcceEEEeCCCCCCchhHHHHHhhcccCceeeeC-ch-hHHhh-cCCCeE-Eec-CCCCCHHHHhcCCCCeEEEEcCCC
Q 044056 14 KSITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF-FL-SMHSL-YASYGT-SEQ-MIASDSNVITRANPMNLIIRFRVG 88 (189)
Q Consensus 14 ~~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~-~~~adv-i~~-~~~~~~~~l~~~p~Lk~I~~~~aG 88 (189)
+.+|+|++++...... + .+.++...++..... +. ++.+. +.++|+ +++ ..++++++++++|+||||++.++|
T Consensus 19 ~~kp~i~~l~~~~~~~-~--~~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G 95 (347)
T 1mx3_A 19 SHMPLVALLDGRDCTV-E--MPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSG 95 (347)
T ss_dssp --CCEEEESSCSCCTT-T--HHHHTTTCEEEECCCSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSCCEEEESSSC
T ss_pred CCCCEEEEEcCCcchh-h--HHHhhccceEEecCCCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCCCEEEEcccc
Confidence 5579999988643221 1 344544333333222 22 44444 367777 544 468999999999999999999999
Q ss_pred CCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------CC-----------CCCCCCCCEEE
Q 044056 89 LEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------VP-----------TGETLLGKTVF 147 (189)
Q Consensus 89 ~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~~-----------~~~~l~gktvG 147 (189)
+|+||+++++++||.|+|+||+ ++++||||+++++|++.|++. .. ...+++|+|||
T Consensus 96 ~d~id~~~~~~~gI~V~n~~~~---~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvG 172 (347)
T 1mx3_A 96 FDNIDIKSAGDLGIAVCNVPAA---SVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLG 172 (347)
T ss_dssp CTTBCHHHHHHTTCEEECCCST---THHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEE
T ss_pred cCcccHHHHHhCCceEEECCCC---CHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEE
Confidence 9999999999999999999999 889999999999999999986 11 12589999999
Q ss_pred EEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 148 ISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 148 IvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
|||+|+||+.+|+++++|||+|++|||+..+
T Consensus 173 IIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~ 203 (347)
T 1mx3_A 173 IIGLGRVGQAVALRAKAFGFNVLFYDPYLSD 203 (347)
T ss_dssp EECCSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred EEeECHHHHHHHHHHHHCCCEEEEECCCcch
Confidence 9999999999999999999999999998654
No 30
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.97 E-value=5.2e-31 Score=222.16 Aligned_cols=156 Identities=20% Similarity=0.250 Sum_probs=128.7
Q ss_pred cceEEEeCCCCCCchhHHHHHhhcccCceeeeC----ch-hHHhhcCCCeE-Eec-CCCCCHHHHhcCCCCeEEEEcCCC
Q 044056 16 ITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCF----FL-SMHSLYASYGT-SEQ-MIASDSNVITRANPMNLIIRFRVG 88 (189)
Q Consensus 16 ~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~-~~~~~~~~adv-i~~-~~~~~~~~l~~~p~Lk~I~~~~aG 88 (189)
|++|+++.+..+. ..+.++...++++... +. ++.+.++++|+ +.+ ..++++++|+.+|+||||++.|+|
T Consensus 2 ~~~il~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G 77 (334)
T 2dbq_A 2 KPKVFITREIPEV----GIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYAVG 77 (334)
T ss_dssp CCEEEESSCCCHH----HHHHHHTTSEEEECCCSSCCCHHHHHHHTTSCSEEEECTTSCBCHHHHHTCTTCCEEEESSSC
T ss_pred CcEEEEecCCCHH----HHHHHHhcCCEEEecCCCCCCHHHHHHHhcCcEEEEEcCCCCCCHHHHhhCCCceEEEECCcc
Confidence 3688887655322 2344444334444332 22 66778899999 554 357999999999999999999999
Q ss_pred CCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC-----------C----C------CCCCCCCCEEE
Q 044056 89 LEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI-----------V----P------TGETLLGKTVF 147 (189)
Q Consensus 89 ~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~-----------~----~------~~~~l~gktvG 147 (189)
+|+||+++++++||.|+|+||+ ++++||||+++++|++.|+++ . . .+.++.|+|||
T Consensus 78 ~d~id~~~~~~~gi~v~n~~~~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vg 154 (334)
T 2dbq_A 78 YDNIDIEEATKRGIYVTNTPDV---LTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIG 154 (334)
T ss_dssp CTTBCHHHHHHTTCEEECCCST---THHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEE
T ss_pred cccccHHHHHhCCCEEEeCCCc---CHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEE
Confidence 9999999999999999999999 899999999999999999985 1 1 24689999999
Q ss_pred EEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 148 ISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 148 IvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
|||+|.||+.+|+++++|||+|++|||+...
T Consensus 155 IIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~ 185 (334)
T 2dbq_A 155 IIGLGRIGQAIAKRAKGFNMRILYYSRTRKE 185 (334)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred EEccCHHHHHHHHHHHhCCCEEEEECCCcch
Confidence 9999999999999999999999999998754
No 31
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.97 E-value=3.5e-31 Score=223.14 Aligned_cols=155 Identities=25% Similarity=0.324 Sum_probs=129.3
Q ss_pred ceEEEeCCCCCCchhHHHHHhhcccCceeee-Cch-hHHhhcCCCeE-Ee-cCCCCCHHHHhcCCCCeEEEEcCCCCCcC
Q 044056 17 TLVLFRGPHFPASHNYAKGYLQNYLSIKGLC-FFL-SMHSLYASYGT-SE-QMIASDSNVITRANPMNLIIRFRVGLEGV 92 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~-~~~~~~~~adv-i~-~~~~~~~~~l~~~p~Lk~I~~~~aG~d~i 92 (189)
+||+++.+..+. ..+.++...++++.. .+. ++.+.++++|+ ++ +..++++++++.+|+||||++.++|+|++
T Consensus 3 ~~il~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~i 78 (333)
T 2d0i_A 3 PKVGVLLKMKRE----ALEELKKYADVEIILYPSGEELKGVIGRFDGIIVSPTTKITREVLENAERLKVISCHSAGYDNI 78 (333)
T ss_dssp SEEEECSCCCHH----HHHHHHTTSEEEECCSCCHHHHHHHGGGCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTB
T ss_pred cEEEEECCCCHH----HHHHHHhcCCEEEeCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHhhCCCceEEEECCcccccc
Confidence 688888765332 234444433444432 123 67788899999 53 44679999999999999999999999999
Q ss_pred ChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------CC------CC----CCCCCCEEEEEcCC
Q 044056 93 DIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------VP------TG----ETLLGKTVFISGFG 152 (189)
Q Consensus 93 d~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~~------~~----~~l~gktvGIvG~G 152 (189)
|+++++++||.|+|+||+ ++++||||+++++|++.|+++ .. .+ .+|.|+||||||+|
T Consensus 79 d~~~~~~~gi~v~n~~~~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G 155 (333)
T 2d0i_A 79 DLEEATKRGIYVTKVSGL---LSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMG 155 (333)
T ss_dssp CHHHHHHTTCEEECCCHH---HHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCS
T ss_pred cHHHHHhCCcEEEeCCCc---ChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccC
Confidence 999999999999999999 899999999999999999986 11 23 78999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 153 NIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 153 ~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.||+.+|+++++|||+|++|||+...
T Consensus 156 ~iG~~vA~~l~~~G~~V~~~d~~~~~ 181 (333)
T 2d0i_A 156 AIGKAIARRLIPFGVKLYYWSRHRKV 181 (333)
T ss_dssp HHHHHHHHHHGGGTCEEEEECSSCCH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCcch
Confidence 99999999999999999999998764
No 32
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.97 E-value=1.5e-30 Score=221.56 Aligned_cols=156 Identities=19% Similarity=0.213 Sum_probs=125.9
Q ss_pred cceEEEeCCCCCCchhHHHHHhhcc-cCceeeeCc---h-hHHhhcCCCeE-EecC---CCCCHHHHhcCCCCeEEEEcC
Q 044056 16 ITLVLFRGPHFPASHNYAKGYLQNY-LSIKGLCFF---L-SMHSLYASYGT-SEQM---IASDSNVITRANPMNLIIRFR 86 (189)
Q Consensus 16 ~~~ilv~~~~~~~~~~~~~~~l~~~-~~~~~~~~~---~-~~~~~~~~adv-i~~~---~~~~~~~l~~~p~Lk~I~~~~ 86 (189)
+++||+.+...+.. .++++.. .++.+.... . ++.+.++++|+ +... .++++++|+++|+||||++.+
T Consensus 17 ~~~vl~~d~~~~~~----~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~~~Lk~I~~~~ 92 (364)
T 2j6i_A 17 EEKLYGCTENKLGI----ANWLKDQGHELITTSDKEGGNSVLDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVVAG 92 (364)
T ss_dssp CTTCTTBTTTGGGC----HHHHHHTTCEEEEESCCSSTTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHCTTCCEEEESS
T ss_pred CceEEEecCccHHH----HHHHHhCCCEEEEcCCCCCCHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhCCCCeEEEECC
Confidence 45566555543332 3444432 233332221 2 67788899999 5432 358999999999999999999
Q ss_pred CCCCcCChhHHhhC--CeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C------CCCCCCCCCEEEE
Q 044056 87 VGLEGVDIDALTNC--AIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V------PTGETLLGKTVFI 148 (189)
Q Consensus 87 aG~d~id~~~~~~~--gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~------~~~~~l~gktvGI 148 (189)
+|+||||++++.++ ||.|+|+||+ ++++||||+++++|++.|+++ . ..+.+|.|+||||
T Consensus 93 ~G~d~id~~~~~~~~~gI~V~n~pg~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgI 169 (364)
T 2j6i_A 93 VGSDHIDLDYINQTGKKISVLEVTGS---NVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIAT 169 (364)
T ss_dssp SCCTTBCHHHHHHHTCCCEEEECTTS---SHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEE
T ss_pred cccccccHHHHHhcCCCEEEEECCCc---CcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEE
Confidence 99999999999999 9999999999 899999999999999999986 1 2467999999999
Q ss_pred EcCCHHHHHHHHHHccCCCE-EEEEcCCCCC
Q 044056 149 SGFGNIGVELAKRLRPFGVK-IIAAKRSWAS 178 (189)
Q Consensus 149 vG~G~IG~~vA~~l~afG~~-V~~~~r~~~~ 178 (189)
||+|+||+++|+++++|||+ |++|||+..+
T Consensus 170 IG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~ 200 (364)
T 2j6i_A 170 IGAGRIGYRVLERLVPFNPKELLYYDYQALP 200 (364)
T ss_dssp ECCSHHHHHHHHHHGGGCCSEEEEECSSCCC
T ss_pred ECcCHHHHHHHHHHHhCCCcEEEEECCCccc
Confidence 99999999999999999997 9999988643
No 33
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.97 E-value=4.9e-30 Score=219.08 Aligned_cols=148 Identities=17% Similarity=0.224 Sum_probs=123.2
Q ss_pred ceEEEeCCCCCCchhHHHHHhhcccCceeeeCchhHHhhcCCCeE-Eec-CCCCCHHHHhcCCCCeEEEEcCCCCCcCCh
Q 044056 17 TLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFFLSMHSLYASYGT-SEQ-MIASDSNVITRANPMNLIIRFRVGLEGVDI 94 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~adv-i~~-~~~~~~~~l~~~p~Lk~I~~~~aG~d~id~ 94 (189)
|||++.+..+ . ..+.++.+.++.+........+.++++|+ +++ .+++++++++ +|+||||++.++|+||||+
T Consensus 1 mkil~~~~~~-~----~~~~~~~~~~v~~~~~~~~~~~~l~~ad~li~~~~~~~~~~~l~-~~~Lk~I~~~~~G~D~iD~ 74 (380)
T 2o4c_A 1 MRILADENIP-V----VDAFFADQGSIRRLPGRAIDRAALAEVDVLLVRSVTEVSRAALA-GSPVRFVGTCTIGTDHLDL 74 (380)
T ss_dssp CEEEEETTCT-T----HHHHHGGGSEEEEECGGGCSTTTTTTCSEEEECTTSCBCHHHHT-TSCCCEEEECSSCSTTBCH
T ss_pred CEEEEecCch-H----HHHHHHhCCcEEEecCCcCChHHHCCcEEEEEcCCCCCCHHHhc-CCCceEEEEcCcccchhhH
Confidence 5888876643 2 23555555444433322223456789999 554 4689999999 9999999999999999999
Q ss_pred hHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcC
Q 044056 95 DALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 95 ~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r 174 (189)
++++++||.|+|+||+ ++.+||||+++++|++.|+. +.++.|+||||||+|+||+.+|++|++|||+|++|||
T Consensus 75 ~~~~~~gI~v~n~pg~---~~~~vAE~~l~~lL~l~r~~----~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~ 147 (380)
T 2o4c_A 75 DYFAEAGIAWSSAPGC---NARGVVDYVLGCLLAMAEVR----GADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDP 147 (380)
T ss_dssp HHHHHHTCEEECCTTT---THHHHHHHHHHHHHHHHHHH----TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECH
T ss_pred HHHHhCCCEEEeCCCc---ChHHHHHHHHHHHHHHHhhh----hcccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 9999999999999998 89999999999999999983 5799999999999999999999999999999999998
Q ss_pred CCC
Q 044056 175 SWA 177 (189)
Q Consensus 175 ~~~ 177 (189)
+..
T Consensus 148 ~~~ 150 (380)
T 2o4c_A 148 PRQ 150 (380)
T ss_dssp HHH
T ss_pred Chh
Confidence 653
No 34
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.96 E-value=1.1e-29 Score=211.50 Aligned_cols=144 Identities=18% Similarity=0.221 Sum_probs=117.8
Q ss_pred ceEEEeCCCCCCchhHHHHHhhcccCceeeeCchhHHhhcCCCeE-EecCCCCCHHHHhcCCCCeEEEEcCCCCCcCChh
Q 044056 17 TLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFFLSMHSLYASYGT-SEQMIASDSNVITRANPMNLIIRFRVGLEGVDID 95 (189)
Q Consensus 17 ~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~adv-i~~~~~~~~~~l~~~p~Lk~I~~~~aG~d~id~~ 95 (189)
|||+++.+..+. ..+.++.. ++++. .+.++++|+ +++. .+.++++++|+||||++.|+|+|+||++
T Consensus 1 m~il~~~~~~~~----~~~~l~~~-~~~v~------~~~~~~~d~~i~~~--~~~~~l~~~~~Lk~I~~~~~G~d~id~~ 67 (303)
T 1qp8_A 1 MELYVNFELPPE----AEEELRKY-FKIVR------GGDLGNVEAALVSR--ITAEELAKMPRLKFIQVVTAGLDHLPWE 67 (303)
T ss_dssp CEEECCSCCCHH----HHHHHHTT-CEEEC------SSCCTTBCCCCBSC--CCHHHHHHCTTCCCEEBSSSCCTTSCCT
T ss_pred CEEEEccCCCHH----HHHHHHhc-CCccc------hhhhCCCEEEEECC--CCHHHHhhCCCCcEEEECCcCcccccHH
Confidence 578887664322 23444332 23332 256788998 5543 5679999999999999999999999998
Q ss_pred HHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----------C--C-CCCCCCCCEEEEEcCCHHHHHHHHHH
Q 044056 96 ALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----------V--P-TGETLLGKTVFISGFGNIGVELAKRL 162 (189)
Q Consensus 96 ~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----------~--~-~~~~l~gktvGIvG~G~IG~~vA~~l 162 (189)
++ ++||.|+|+||+ ++.+||||+++++|++.|+++ . . ...++.|+||||||+|+||+.+|+++
T Consensus 68 ~~-~~gi~v~~~~~~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l 143 (303)
T 1qp8_A 68 SI-PPHVTVAGNAGS---NADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKIL 143 (303)
T ss_dssp TS-CTTSCEECCCSS---SHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHH
T ss_pred HH-hcCCEEEECCCC---CchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHH
Confidence 84 799999999998 899999999999999999987 1 1 33589999999999999999999999
Q ss_pred ccCCCEEEEEcCCCC
Q 044056 163 RPFGVKIIAAKRSWA 177 (189)
Q Consensus 163 ~afG~~V~~~~r~~~ 177 (189)
++|||+|++|||++.
T Consensus 144 ~~~G~~V~~~dr~~~ 158 (303)
T 1qp8_A 144 AALGAQVRGFSRTPK 158 (303)
T ss_dssp HHTTCEEEEECSSCC
T ss_pred HHCCCEEEEECCCcc
Confidence 999999999999876
No 35
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.95 E-value=1.7e-28 Score=203.11 Aligned_cols=146 Identities=21% Similarity=0.286 Sum_probs=112.9
Q ss_pred eEEEeCCCCCCchhHHHHHhhcccCceeeeCchhHHhhcCCCeE-EecCCCCCHHHHhcCCCCeEEEEcCCCCCcCChhH
Q 044056 18 LVLFRGPHFPASHNYAKGYLQNYLSIKGLCFFLSMHSLYASYGT-SEQMIASDSNVITRANPMNLIIRFRVGLEGVDIDA 96 (189)
Q Consensus 18 ~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~adv-i~~~~~~~~~~l~~~p~Lk~I~~~~aG~d~id~~~ 96 (189)
+|++..+......+...+.++.+ +.+ +.+.++++|+ +++..++ ++|+||||++.|+|+|+||+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~-~~~-------~~~~~~~ad~li~~~~~~------~~~~Lk~I~~~~~G~d~id~~~ 67 (290)
T 3gvx_A 2 DVYVNFPADGHVREIAKTVLDGF-DLH-------WYPDYYDAEAQVIKDRYV------LGKRTKMIQAISAGVDHIDVNG 67 (290)
T ss_dssp CEEECSCCCHHHHHHHHHHTTTS-CEE-------ETTSCCCCSEEEESSCCC------CCSSCCEEEECSSCCTTSCGGG
T ss_pred ceEEecCCcchHHHHHHHHhccc-ccc-------cCcchhhhhhhhhhhhhh------hhhhhHHHHHHhcCCceeecCC
Confidence 45555555433333334444443 211 2267789999 5533332 7899999999999999999999
Q ss_pred HhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC------------CCCCCCCCCCEEEEEcCCHHHHHHHHHHcc
Q 044056 97 LTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI------------VPTGETLLGKTVFISGFGNIGVELAKRLRP 164 (189)
Q Consensus 97 ~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~------------~~~~~~l~gktvGIvG~G~IG~~vA~~l~a 164 (189)
+.++++.++|. |. ++++||||+++++|++.|+++ .....+|+|+||||||+|.||+.+|++|++
T Consensus 68 ~~~~~~~~~~~-~~---~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~ 143 (290)
T 3gvx_A 68 IPENVVLCSNA-GA---YSISVAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKA 143 (290)
T ss_dssp SCTTSEEECCH-HH---HHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred CccceEEeecC-Cc---ceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHh
Confidence 99877766664 66 889999999999999999997 223468999999999999999999999999
Q ss_pred CCCEEEEEcCCCCCccc
Q 044056 165 FGVKIIAAKRSWASHSQ 181 (189)
Q Consensus 165 fG~~V~~~~r~~~~~~~ 181 (189)
|||+|++|||++++...
T Consensus 144 ~G~~V~~~dr~~~~~~~ 160 (290)
T 3gvx_A 144 FGMRVIAYTRSSVDQNV 160 (290)
T ss_dssp HTCEEEEECSSCCCTTC
T ss_pred hCcEEEEEecccccccc
Confidence 99999999999766543
No 36
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.91 E-value=4.9e-24 Score=176.30 Aligned_cols=150 Identities=15% Similarity=0.191 Sum_probs=117.7
Q ss_pred CCcceEEEeCCCCCCchhHHHHHhhc-ccCceeeeCc-----------h-hHHhhcCCCeE-Eec---------------
Q 044056 14 KSITLVLFRGPHFPASHNYAKGYLQN-YLSIKGLCFF-----------L-SMHSLYASYGT-SEQ--------------- 64 (189)
Q Consensus 14 ~~~~~ilv~~~~~~~~~~~~~~~l~~-~~~~~~~~~~-----------~-~~~~~~~~adv-i~~--------------- 64 (189)
++.|+|+++.... ....+. +.|.. ..++.+...+ . ++.+.++++|+ +.+
T Consensus 3 ~~~m~i~v~~~~~-~~~~~~-~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~ 80 (293)
T 3d4o_A 3 LTGKHVVIIGGDA-RQLEII-RKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFS 80 (293)
T ss_dssp CTTCEEEEECBCH-HHHHHH-HHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSC
T ss_pred ccCcEEEEECCCH-HHHHHH-HHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeecccc
Confidence 4568899987653 222233 33433 2344433221 1 45666789999 553
Q ss_pred --CCCCCHHHHhcCCCCeEEEEcCCCCCcCCh-hHHhhCCeEEEecC------CCCCCCchhHHHHHHHHHHHHHhcCCC
Q 044056 65 --MIASDSNVITRANPMNLIIRFRVGLEGVDI-DALTNCAIKAARIL------GDVSGNAASCAELSIYLMLGLLRKHIV 135 (189)
Q Consensus 65 --~~~~~~~~l~~~p~Lk~I~~~~aG~d~id~-~~~~~~gI~v~n~~------g~~~~~a~~vAE~~l~liL~~~R~~~~ 135 (189)
..++++++++.+|+||+|+ +|+|++|+ ++++++||.|+|++ ++ ++.+|||++++++|.+
T Consensus 81 ~~~~~~~~~~l~~~~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~---~~~svae~a~~~~l~~------ 148 (293)
T 3d4o_A 81 NESIVLTEEMIEKTPNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIY---NSIPTAEGTIMMAIQH------ 148 (293)
T ss_dssp SCCCBCCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHH---HHHHHHHHHHHHHHHH------
T ss_pred cCCccchHHHHHhCCCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeee---ccHhHHHHHHHHHHHh------
Confidence 1257999999999999997 89999998 89999999999998 77 8899999999999985
Q ss_pred CCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 136 PTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+.++.|+||||+|+|+||+.+|+++++|||+|++|||++.+
T Consensus 149 -~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~ 190 (293)
T 3d4o_A 149 -TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDL 190 (293)
T ss_dssp -CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred -cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 356899999999999999999999999999999999998643
No 37
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.83 E-value=1.5e-20 Score=155.81 Aligned_cols=153 Identities=14% Similarity=0.153 Sum_probs=107.8
Q ss_pred CCCCcceEEEeCCCCCCchhHHHHHhhcccCceeeeCch------------hHHhhcCCCeE-Ee----c----------
Q 044056 12 SDKSITLVLFRGPHFPASHNYAKGYLQNYLSIKGLCFFL------------SMHSLYASYGT-SE----Q---------- 64 (189)
Q Consensus 12 ~~~~~~~ilv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------~~~~~~~~adv-i~----~---------- 64 (189)
..|+.|||+++.... ....+...+.+..+++.+...++ ++.+.++++|+ +. .
T Consensus 3 ~~~~~mki~v~~~~~-~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~ 81 (300)
T 2rir_A 3 AMLTGLKIAVIGGDA-RQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVF 81 (300)
T ss_dssp CCCCSCEEEEESBCH-HHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSS
T ss_pred ccccCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEeccccccCCccccccc
Confidence 346668999998742 22233333323333443332221 24566788999 55 1
Q ss_pred -CCC--CCHHHHhcCCCCeEEEEcCCCCCcCC-hhHHhhCCeEEEecCCCCCCCchh------HHHHHHHHHHHHHhcCC
Q 044056 65 -MIA--SDSNVITRANPMNLIIRFRVGLEGVD-IDALTNCAIKAARILGDVSGNAAS------CAELSIYLMLGLLRKHI 134 (189)
Q Consensus 65 -~~~--~~~~~l~~~p~Lk~I~~~~aG~d~id-~~~~~~~gI~v~n~~g~~~~~a~~------vAE~~l~liL~~~R~~~ 134 (189)
..+ +++++++.+|++|+|+ +|+|++| ++++.++||.|+|+|++ ++.+ +++..+.. . .
T Consensus 82 a~~~~~~~~~~l~~~~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~---~~v~~~r~~~~~~g~~~~--~-~---- 148 (300)
T 2rir_A 82 SNEEVVLKQDHLDRTPAHCVIF---SGISNAYLENIAAQAKRKLVKLFER---DDIAIYNSIPTVEGTIML--A-I---- 148 (300)
T ss_dssp CSSCEECCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGS---HHHHHHHHHHHHHHHHHH--H-H----
T ss_pred ccCCccchHHHHhhcCCCCEEE---EecCCHHHHHHHHHCCCEEEeecCC---CceEEEcCccHHHHHHHH--H-H----
Confidence 245 7899999999999998 8999999 99999999999999997 3111 11111111 0 0
Q ss_pred CCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 135 VPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 135 ~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
...+.++.|+||||||+|+||+.+|+++++|||+|++|||+..+
T Consensus 149 ~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~ 192 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAH 192 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred HhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 12467899999999999999999999999999999999998643
No 38
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.55 E-value=1.6e-15 Score=133.21 Aligned_cols=96 Identities=15% Similarity=0.209 Sum_probs=79.2
Q ss_pred CCCeEEE-EcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----CCCCCCCCCCEEEEEcC
Q 044056 77 NPMNLII-RFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----VPTGETLLGKTVFISGF 151 (189)
Q Consensus 77 p~Lk~I~-~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----~~~~~~l~gktvGIvG~ 151 (189)
|+++.|. .+++|+|++ +++.++||.++|++++ ++ +|||+.+-.+....+.+. ...+.++.||||||+|+
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~v---n~-sVae~l~r~~~~~~~~l~~gw~~~~g~~L~GktVgIIG~ 285 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNV---ND-SVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGY 285 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEEC---TT-SHHHHHHHHHHHHHTTHHHHHHHHHCCCCTTCEEEEECC
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCc---cH-HHHHHHHhhhHhhhhhhhhhhhhccccccCCCEEEEEcc
Confidence 7899998 889999998 7899999999999998 87 999965433322211111 22467899999999999
Q ss_pred CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 152 GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 152 G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
|.||+.+|++|++|||+|++|||++..
T Consensus 286 G~IG~~vA~~l~~~G~~V~v~d~~~~~ 312 (494)
T 3d64_A 286 GDVGKGCAQSLRGLGATVWVTEIDPIC 312 (494)
T ss_dssp SHHHHHHHHHHHTTTCEEEEECSCHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCChHh
Confidence 999999999999999999999998653
No 39
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.51 E-value=1.2e-15 Score=133.43 Aligned_cols=96 Identities=14% Similarity=0.159 Sum_probs=77.7
Q ss_pred CCCeEEE-EcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----CCCCCCCCCCEEEEEcC
Q 044056 77 NPMNLII-RFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----VPTGETLLGKTVFISGF 151 (189)
Q Consensus 77 p~Lk~I~-~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----~~~~~~l~gktvGIvG~ 151 (189)
|+++.|+ .+++|+|++ +++.++||.++|++++ ++ +|||+.+-.+....+.+. ...+.++.||||||+|+
T Consensus 192 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~v---n~-sVae~l~r~~~~~~~~l~~gw~r~~~~~l~GktVgIIG~ 265 (479)
T 1v8b_A 192 KKIIGVSEETTTGVLRL--KKMDKQNELLFTAINV---ND-AVTKQKYDNVYGCRHSLPDGLMRATDFLISGKIVVICGY 265 (479)
T ss_dssp TTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEEC---TT-SHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTSEEEEECC
T ss_pred cCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCc---cH-HHHHHHHhchHhHHHHHhhhhhhccccccCCCEEEEEee
Confidence 7999999 899999998 7899999999999998 77 999954222211111100 12456899999999999
Q ss_pred CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 152 GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 152 G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
|.||+.+|++|++|||+|++||+++..
T Consensus 266 G~IG~~vA~~l~~~G~~Viv~d~~~~~ 292 (479)
T 1v8b_A 266 GDVGKGCASSMKGLGARVYITEIDPIC 292 (479)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred CHHHHHHHHHHHhCcCEEEEEeCChhh
Confidence 999999999999999999999998653
No 40
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.43 E-value=3.9e-13 Score=114.62 Aligned_cols=119 Identities=12% Similarity=0.021 Sum_probs=94.5
Q ss_pred hcCCCeE-EecCCCCCHHHHhcCCCCeEEEEcCCCCCcCChhHHhhCCeEEE----------ecCCCCCCCchhHHHHHH
Q 044056 55 LYASYGT-SEQMIASDSNVITRANPMNLIIRFRVGLEGVDIDALTNCAIKAA----------RILGDVSGNAASCAELSI 123 (189)
Q Consensus 55 ~~~~adv-i~~~~~~~~~~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~----------n~~g~~~~~a~~vAE~~l 123 (189)
.++++|+ +....++++++....|+..++.....++|...++.+.++||.+. |.|.+ .++||++.
T Consensus 64 ~~~~adii~~vk~p~~~e~~~l~~~~~l~~~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~-----s~~ae~ag 138 (377)
T 2vhw_A 64 VWADADLLLKVKEPIAAEYGRLRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLL-----APMSEVAG 138 (377)
T ss_dssp HHHHCSEEECSSCCCGGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTT-----HHHHHHHH
T ss_pred HhccCCEEEEeCCCChHHHhhcCCCCEEEEEecccCCHHHHHHHHHcCCeEEEeeeccccCCCcccc-----CchHHHHH
Confidence 3456888 44556777777776788888877788889888999999999997 66665 67889999
Q ss_pred HHHHHHH-hcCCC---------CCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 124 YLMLGLL-RKHIV---------PTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 124 ~liL~~~-R~~~~---------~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+.+.+. |++.. ....++.|+||+|+|+|.||+.+|+++++||++|+++|+++..
T Consensus 139 ~~a~~~a~r~l~~~~~g~~~~~~~~~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~ 203 (377)
T 2vhw_A 139 RLAAQVGAYHLMRTQGGRGVLMGGVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDK 203 (377)
T ss_dssp HHHHHHHHHHTSGGGTSCCCCTTCBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred HHHHHHHHHHHHHhcCCCcccccCCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 5555444 77761 1123689999999999999999999999999999999998643
No 41
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.23 E-value=6.6e-11 Score=101.65 Aligned_cols=121 Identities=12% Similarity=0.021 Sum_probs=86.5
Q ss_pred CCeEEecCCCCCHHHHhcC-CCCeEEEEcCCCCCcCChhHHhhCCeEEEecCCCCC-CC------chhHHHHHH-HHHHH
Q 044056 58 SYGTSEQMIASDSNVITRA-NPMNLIIRFRVGLEGVDIDALTNCAIKAARILGDVS-GN------AASCAELSI-YLMLG 128 (189)
Q Consensus 58 ~advi~~~~~~~~~~l~~~-p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~-~~------a~~vAE~~l-~liL~ 128 (189)
.+|+++.....+.+.++.+ |++++|+..+.|+|+++++++.++||++.+...... .. ..++++.+- ..++.
T Consensus 72 ~adiil~vk~p~~~~i~~l~~~~~li~~~~~~~d~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~~~a~~ag~~av~~ 151 (401)
T 1x13_A 72 QSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVE 151 (401)
T ss_dssp SSSEEECSSCCCHHHHTTCCTTCEEEECCCGGGCHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEeCCCCHHHHHHhcCCCcEEEEecCCCCHHHHHHHHHCCCEEEEeehhhhhhhhcccchHHHHHHHHHHHHHHH
Confidence 3898443333466778887 799999999999999999999999999986533310 01 234555542 12222
Q ss_pred HHhcCC-CCCC-----CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 129 LLRKHI-VPTG-----ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 129 ~~R~~~-~~~~-----~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
..+.+. ...+ .++.+++|+|+|+|.||+.+++.+++||++|+++|+++..
T Consensus 152 ~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~ 207 (401)
T 1x13_A 152 AAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEV 207 (401)
T ss_dssp HHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGG
T ss_pred HHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 222222 1111 1578999999999999999999999999999999998654
No 42
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.17 E-value=1.3e-10 Score=99.18 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=89.2
Q ss_pred hhcCCCeE-EecCCCC----CHHHHhcCC-CCeEEEEcCCCCCcCChhHHhhCCeEEEecCCCCCC--Cc------hhHH
Q 044056 54 SLYASYGT-SEQMIAS----DSNVITRAN-PMNLIIRFRVGLEGVDIDALTNCAIKAARILGDVSG--NA------ASCA 119 (189)
Q Consensus 54 ~~~~~adv-i~~~~~~----~~~~l~~~p-~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~--~a------~~vA 119 (189)
+.++++|+ +....++ +++.++.++ +++++.....+.|+.+++++.++||.+++..-. +. .+ .+++
T Consensus 63 ~~~~~adiil~v~~p~~~~~~~~~i~~l~~~~~~i~~~~~~~~~~~~~~~~~~gi~~~~~e~~-~~~~~~~~l~~l~~~a 141 (384)
T 1l7d_A 63 QALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELM-PRISRAQSMDILSSQS 141 (384)
T ss_dssp HHHSSCSEEEEEECCCCGGGSCCGGGGSCTTCEEEEECCGGGCHHHHHHHHHTTCEEEEGGGC-CCSGGGGGGCHHHHHH
T ss_pred hhhcCCCEEEEecCcccccCCHHHHHhhccCCEEEEEecccCCHHHHHHHHHCCCEEEEeccc-cccccccccchhhHHH
Confidence 45678999 5444565 778889885 699999999999999999999999999974211 10 11 2344
Q ss_pred HHHH--HHHHHHHhcCCCC------CCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 120 ELSI--YLMLGLLRKHIVP------TGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 120 E~~l--~liL~~~R~~~~~------~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+.+- +...+ .+.+... ...++.+++|+|+|+|.||+.+++.+++||++|+++|+++..
T Consensus 142 ~~ag~~av~~~-~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~ 207 (384)
T 1l7d_A 142 NLAGYRAVIDG-AYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAAT 207 (384)
T ss_dssp HHHHHHHHHHH-HHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred HHHHHHHHHHH-HHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4332 22222 2222210 114789999999999999999999999999999999998754
No 43
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.09 E-value=1.4e-11 Score=108.34 Aligned_cols=95 Identities=17% Similarity=0.198 Sum_probs=72.6
Q ss_pred CCe-EEEEcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC----CCCCCCCCCCEEEEEcCC
Q 044056 78 PMN-LIIRFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI----VPTGETLLGKTVFISGFG 152 (189)
Q Consensus 78 ~Lk-~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~----~~~~~~l~gktvGIvG~G 152 (189)
+++ ++-.+++|+|++ .++.++||.++|++++ ++ +|||+.+-.+....+... ......+.|++|+|+|+|
T Consensus 210 ~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~v---n~-sVae~~~r~l~~~~~s~~~g~~r~~~~~l~GktV~IiG~G 283 (494)
T 3ce6_A 210 SVKGVTEETTTGVLRL--YQFAAAGDLAFPAINV---ND-SVTKSKFDNKYGTRHSLIDGINRGTDALIGGKKVLICGYG 283 (494)
T ss_dssp HCCCEEECSHHHHHHH--HHHHHTTCCCSCEEEC---TT-SHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCS
T ss_pred CeEEEEEEeCCChhHH--HHHHHcCCEEEecCCc---cH-HHHHHHHhhhhhhhhhhhHHHHhccCCCCCcCEEEEEccC
Confidence 344 445889999998 6788999999999998 76 999965433222111000 112347899999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 153 NIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 153 ~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.||+.+|+++++||++|+++|+++..
T Consensus 284 ~IG~~~A~~lka~Ga~Viv~d~~~~~ 309 (494)
T 3ce6_A 284 DVGKGCAEAMKGQGARVSVTEIDPIN 309 (494)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 99999999999999999999997644
No 44
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.04 E-value=3e-09 Score=90.19 Aligned_cols=118 Identities=10% Similarity=0.032 Sum_probs=86.7
Q ss_pred hcCCCeE-EecCCCCCHHHHhcC-CCCeEEEEcCCCCCcCChhHHhhCCeEEE---ecCCCCCCCc----hhHHHHHH--
Q 044056 55 LYASYGT-SEQMIASDSNVITRA-NPMNLIIRFRVGLEGVDIDALTNCAIKAA---RILGDVSGNA----ASCAELSI-- 123 (189)
Q Consensus 55 ~~~~adv-i~~~~~~~~~~l~~~-p~Lk~I~~~~aG~d~id~~~~~~~gI~v~---n~~g~~~~~a----~~vAE~~l-- 123 (189)
.. ++|+ +....++++ .+..+ |+++++.....+.|..+++.+.++||.+. +.+.. . .. .+++|.+-
T Consensus 63 ~~-~ad~il~vk~p~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ia~e~~~~~-~-~~~~~l~~~s~~ag~~ 138 (369)
T 2eez_A 63 AW-GAEMVVKVKEPLPE-EYGFLREGLILFTYLHLAADRGLTEAMLRSGVTGIAYETVQLP-D-GTLPLLVPMSEVAGRM 138 (369)
T ss_dssp HT-TSSEEECSSCCCGG-GGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCT-T-CCCTTTHHHHHHHHHH
T ss_pred ee-cCCEEEEECCCCHH-HHhhcCCCcEEEEEecccCCHHHHHHHHHCCCeEEEeeccccc-c-CCeeecccchHHHHHH
Confidence 44 7999 444455544 46665 78999999999999999999999999997 44442 0 11 45666554
Q ss_pred HHHHHHHhcCC---------CCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 124 YLMLGLLRKHI---------VPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 124 ~liL~~~R~~~---------~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+.++++. .+. .....++.+++|+|+|.|.||+.+|+.++++|++|+++|++..
T Consensus 139 av~~a~~-~l~~~~~g~~~~~~~~~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~ 200 (369)
T 2eez_A 139 APQVGAQ-FLEKPKGGRGVLLGGVPGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHK 200 (369)
T ss_dssp HHHHHHH-HTSGGGTSCCCCTTCBTBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred HHHHHHH-HHHHhcCCCceecCCCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 3333332 232 1112468999999999999999999999999999999999764
No 45
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.94 E-value=3.8e-10 Score=97.46 Aligned_cols=91 Identities=19% Similarity=0.193 Sum_probs=61.0
Q ss_pred EcCCCCCcCC-hhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHH
Q 044056 84 RFRVGLEGVD-IDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRL 162 (189)
Q Consensus 84 ~~~aG~d~id-~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l 162 (189)
-+++|+..+. .....+.+|+|.|+++. ......+...+..-.+.+.+....+.++.||||||+|+|.||+.+|++|
T Consensus 154 eTttGv~rL~~~~~~g~L~iPVinvnds---vtk~~~Dn~~Gt~~slldgi~ratg~~L~GktVgIiG~G~IG~~vA~~L 230 (436)
T 3h9u_A 154 ETTTGVKNLYKRLQRGKLTIPAMNVNDS---VTKSKFDNLYGCRESLVDGIKRATDVMIAGKTACVCGYGDVGKGCAAAL 230 (436)
T ss_dssp CSHHHHHHHHHHHHHTCCCSCEEECTTS---HHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHH
T ss_pred ccCcChHHHHHHHHcCCCCCceEeechh---hhhhhhhccccchHHHHHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHH
Confidence 3445554432 23345689999999876 4444222222211111111111246789999999999999999999999
Q ss_pred ccCCCEEEEEcCCCC
Q 044056 163 RPFGVKIIAAKRSWA 177 (189)
Q Consensus 163 ~afG~~V~~~~r~~~ 177 (189)
++|||+|++||+++.
T Consensus 231 ka~Ga~Viv~D~~p~ 245 (436)
T 3h9u_A 231 RGFGARVVVTEVDPI 245 (436)
T ss_dssp HHTTCEEEEECSCHH
T ss_pred HHCCCEEEEECCChh
Confidence 999999999999753
No 46
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.88 E-value=5.9e-11 Score=101.93 Aligned_cols=98 Identities=23% Similarity=0.325 Sum_probs=84.1
Q ss_pred CCCeEEEEcCCCCCcCChhHHh-----hCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC-------CCC-------
Q 044056 77 NPMNLIIRFRVGLEGVDIDALT-----NCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI-------VPT------- 137 (189)
Q Consensus 77 p~Lk~I~~~~aG~d~id~~~~~-----~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~-------~~~------- 137 (189)
+.+++|...++|+|++++.+.. ++++.+++.+|. . ..++++.+..++.+.|++. ...
T Consensus 80 ~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~---~-~~~~~~~~~~a~~~~k~v~~~~~~~~~~~s~a~~av 155 (404)
T 1gpj_A 80 EAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT---L-DEALKIVFRRAINLGKRAREETRISEGAVSIGSAAV 155 (404)
T ss_dssp HHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC---C-CHHHHHHHHHHHHHHHHHHHHSSTTCSCCSHHHHHH
T ss_pred hHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC---c-hHHHHHHHHHHhhhhccCcchhhhcCCCccHHHHHH
Confidence 4688999999999999998877 889999999886 2 6899999999999999876 000
Q ss_pred ------CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 138 ------GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 138 ------~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
..++.|++|+|+|+|.||+.+++.++++|+ +|++++|+..+
T Consensus 156 ~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~r 203 (404)
T 1gpj_A 156 ELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYER 203 (404)
T ss_dssp HHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHH
T ss_pred HHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence 014789999999999999999999999999 99999998643
No 47
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.73 E-value=5.1e-09 Score=90.59 Aligned_cols=86 Identities=19% Similarity=0.269 Sum_probs=58.7
Q ss_pred EcCCCCCcCC-hhHHhhCCeEEEecCCCCCC----CchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHH
Q 044056 84 RFRVGLEGVD-IDALTNCAIKAARILGDVSG----NAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVEL 158 (189)
Q Consensus 84 ~~~aG~d~id-~~~~~~~gI~v~n~~g~~~~----~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~v 158 (189)
-+++|+-.+- ....-...+|+.|+.+..+. |-..+.|.++..+. | ..+.++.||||||+|+|.||+.+
T Consensus 190 eTtTGv~rL~~m~~~g~L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---R----atg~~L~GKTVgVIG~G~IGr~v 262 (464)
T 3n58_A 190 ETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---R----GTDVMMAGKVAVVCGYGDVGKGS 262 (464)
T ss_dssp CSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---H----HHCCCCTTCEEEEECCSHHHHHH
T ss_pred ccccchHHHHHHHHcCCCCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---H----hcCCcccCCEEEEECcCHHHHHH
Confidence 4455555432 12223456999998776221 11233444443332 2 24678999999999999999999
Q ss_pred HHHHccCCCEEEEEcCCC
Q 044056 159 AKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 159 A~~l~afG~~V~~~~r~~ 176 (189)
|++|++|||+|+++++.+
T Consensus 263 A~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 263 AQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp HHHHHHTTCEEEEECSSH
T ss_pred HHHHHHCCCEEEEEeCCc
Confidence 999999999999998865
No 48
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.67 E-value=9.7e-09 Score=88.55 Aligned_cols=71 Identities=20% Similarity=0.299 Sum_probs=53.2
Q ss_pred hCCeEEEecCCCCCC----CchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcC
Q 044056 99 NCAIKAARILGDVSG----NAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 99 ~~gI~v~n~~g~~~~----~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r 174 (189)
+..+||.|+.+..+. +-..+++-++..+.. ..+..+.||||+|+|+|.||+.+|++|++|||+|+++|+
T Consensus 179 ~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~r-------at~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~ 251 (435)
T 3gvp_A 179 KLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKR-------TTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEI 251 (435)
T ss_dssp CCCSCEEECTTCHHHHHHHTHHHHHHHHHHHHHH-------HHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCEEEecchhhhhhhhhhhhhHHHHHHHHHH-------hhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeC
Confidence 457999998886221 112234444433332 246789999999999999999999999999999999998
Q ss_pred CC
Q 044056 175 SW 176 (189)
Q Consensus 175 ~~ 176 (189)
++
T Consensus 252 dp 253 (435)
T 3gvp_A 252 DP 253 (435)
T ss_dssp CH
T ss_pred Ch
Confidence 75
No 49
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=98.59 E-value=9.3e-08 Score=82.44 Aligned_cols=58 Identities=34% Similarity=0.490 Sum_probs=49.2
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCCC-CCCCEEEEEcCCHHHHHHHHHHcc-CCCEEEEEcCC
Q 044056 114 NAASCAELSIYLMLGLLRKHIVPTGET-LLGKTVFISGFGNIGVELAKRLRP-FGVKIIAAKRS 175 (189)
Q Consensus 114 ~a~~vAE~~l~liL~~~R~~~~~~~~~-l~gktvGIvG~G~IG~~vA~~l~a-fG~~V~~~~r~ 175 (189)
..++++--++..+...++. .+.+ |.||||||+|+|+||+.+|+++++ |||+|++|+++
T Consensus 186 ~~~aTg~Gv~~~~~~~~~~----~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 186 RIEATARGASYTIREAAKV----LGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp TTTHHHHHHHHHHHHHHHH----TTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CCcchhhHHHHHHHHHHHH----hCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 3457777777777777775 4667 999999999999999999999999 99999999544
No 50
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=98.40 E-value=6.2e-07 Score=75.70 Aligned_cols=93 Identities=23% Similarity=0.240 Sum_probs=64.1
Q ss_pred eEEEEcCCCCCcCChhHHhhCCeEEEecC---CCCCCCchhHHHHHHHHHHHHHhcCCCCCCC-CCCCCEEEEEcCCHHH
Q 044056 80 NLIIRFRVGLEGVDIDALTNCAIKAARIL---GDVSGNAASCAELSIYLMLGLLRKHIVPTGE-TLLGKTVFISGFGNIG 155 (189)
Q Consensus 80 k~I~~~~aG~d~id~~~~~~~gI~v~n~~---g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~-~l~gktvGIvG~G~IG 155 (189)
+.|-..-.|++.=+..++...-=.||--| |-+.+-.++++--++..+-..++. .+. ++.||||+|+|+|+||
T Consensus 112 ~~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~----~G~~~L~GktV~I~G~GnVG 187 (355)
T 1c1d_A 112 NYWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAH----RGLGSLDGLTVLVQGLGAVG 187 (355)
T ss_dssp SEEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHH----TTCCCSTTCEEEEECCSHHH
T ss_pred CcccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHh----cCCCCCCCCEEEEECcCHHH
Confidence 57766667776544444433211233322 111113356666677777777775 355 8999999999999999
Q ss_pred HHHHHHHccCCCEEEEEcCCC
Q 044056 156 VELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 156 ~~vA~~l~afG~~V~~~~r~~ 176 (189)
+.+|++|++|||+|+++|++.
T Consensus 188 ~~~A~~l~~~GakVvvsD~~~ 208 (355)
T 1c1d_A 188 GSLASLAAEAGAQLLVADTDT 208 (355)
T ss_dssp HHHHHHHHHTTCEEEEECSCH
T ss_pred HHHHHHHHHCCCEEEEEeCCc
Confidence 999999999999999999864
No 51
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.12 E-value=1.4e-06 Score=76.20 Aligned_cols=86 Identities=20% Similarity=0.311 Sum_probs=58.9
Q ss_pred EcCCCCCcCC-hhHHhhCCeEEEecCCCCCC----CchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHH
Q 044056 84 RFRVGLEGVD-IDALTNCAIKAARILGDVSG----NAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVEL 158 (189)
Q Consensus 84 ~~~aG~d~id-~~~~~~~gI~v~n~~g~~~~----~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~v 158 (189)
-+++|+..+- +.......||+.|+.+..+. +...+++.++..+. | .....+.||+++|+|+|.||+.+
T Consensus 208 eTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r----~tg~~L~GKtVvVtGaGgIG~ai 280 (488)
T 3ond_A 208 ETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---R----ATDVMIAGKVAVVAGYGDVGKGC 280 (488)
T ss_dssp CSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---H----HHCCCCTTCEEEEECCSHHHHHH
T ss_pred cccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHHHHHHHH---H----HcCCcccCCEEEEECCCHHHHHH
Confidence 4556665542 11222467999999885110 11134554443332 3 23457999999999999999999
Q ss_pred HHHHccCCCEEEEEcCCC
Q 044056 159 AKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 159 A~~l~afG~~V~~~~r~~ 176 (189)
|++|+++|++|+++|+++
T Consensus 281 A~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 281 AAALKQAGARVIVTEIDP 298 (488)
T ss_dssp HHHHHHTTCEEEEECSCH
T ss_pred HHHHHHCCCEEEEEcCCH
Confidence 999999999999999875
No 52
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.07 E-value=1e-05 Score=68.78 Aligned_cols=119 Identities=14% Similarity=0.067 Sum_probs=75.9
Q ss_pred CeEEecCCCCCHHHHhcC-CCCeEEEEcCCCCCcCChhHHhhCCeEEEe---cCCCCC----CCchhHHHHHH--HHHHH
Q 044056 59 YGTSEQMIASDSNVITRA-NPMNLIIRFRVGLEGVDIDALTNCAIKAAR---ILGDVS----GNAASCAELSI--YLMLG 128 (189)
Q Consensus 59 advi~~~~~~~~~~l~~~-p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n---~~g~~~----~~a~~vAE~~l--~liL~ 128 (189)
+|+|+.-.+++++-++.+ |+..++....-..|.=-++.+.+++|...- .|..+- .-=.++||.+= +.+++
T Consensus 85 adiIlkVk~p~~~e~~~l~~g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av~~a 164 (381)
T 3p2y_A 85 ADVVVKVNPPTSDEISQLKPGSVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVLLG 164 (381)
T ss_dssp SSEEECSSCCCHHHHTTSCTTCEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChhHHhhccCCCEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHHHHH
Confidence 788554455666667777 455566555544444345778889988743 222100 01124555554 22222
Q ss_pred HHhcCC------CCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 129 LLRKHI------VPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 129 ~~R~~~------~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
. ..+. ......+.+++|+|+|+|.||..+|+.+++||++|++||+++..
T Consensus 165 a-~~l~~~~~~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~ 219 (381)
T 3p2y_A 165 A-SLSTRFVPMLTTAAGTVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEV 219 (381)
T ss_dssp H-HHCSSCSSCEECSSCEECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGG
T ss_pred H-HHhhhhhhhhhcccCCcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 2 2222 11234678999999999999999999999999999999998754
No 53
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.06 E-value=1.6e-06 Score=69.80 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=73.3
Q ss_pred CeEEecCCCCCHHHHhcCCCCeEEEEcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCC
Q 044056 59 YGTSEQMIASDSNVITRANPMNLIIRFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTG 138 (189)
Q Consensus 59 advi~~~~~~~~~~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~ 138 (189)
.+.+..+.|+.++++..++.|.-++....|+|.++. +.| +..|+ +.+. .+++.++.|. +
T Consensus 54 ~~G~~vt~P~k~~i~~~~~~l~~~a~~~gavn~i~~----~~g----~~~g~---ntd~-----~g~~~~l~~~-----~ 112 (263)
T 2d5c_A 54 FRGVNLTLPLKEAALAHLDWVSPEAQRIGAVNTVLQ----VEG----RLFGF---NTDA-----PGFLEALKAG-----G 112 (263)
T ss_dssp CSEEEECTTCTTGGGGGCSEECHHHHHHTCCCEEEE----ETT----EEEEE---CCHH-----HHHHHHHHHT-----T
T ss_pred CceEEEcccCHHHHHHHHHHHhHHHHHhCCCCcEEc----cCC----eEEEe---CCCH-----HHHHHHHHHh-----C
Confidence 333444568888999988999888888999999864 344 23344 3332 3556665553 3
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++.| +++|||+|.+|+.+|+.|..+|++|.+|+|+..
T Consensus 113 ~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~ 150 (263)
T 2d5c_A 113 IPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQ 150 (263)
T ss_dssp CCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 47889 999999999999999999999999999999853
No 54
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.97 E-value=6.5e-06 Score=69.69 Aligned_cols=95 Identities=23% Similarity=0.241 Sum_probs=61.3
Q ss_pred eEEEEcCCCCCcCChhHHhhCCeEEEecC---CCCCCCchhHHHHHHHHHHHHHhcCCCCCCC-CCCCCEEEEEcCCHHH
Q 044056 80 NLIIRFRVGLEGVDIDALTNCAIKAARIL---GDVSGNAASCAELSIYLMLGLLRKHIVPTGE-TLLGKTVFISGFGNIG 155 (189)
Q Consensus 80 k~I~~~~aG~d~id~~~~~~~gI~v~n~~---g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~-~l~gktvGIvG~G~IG 155 (189)
++|-..-.|++.-++.++...==.+|--| |-+.+-.++++--++..+..++++. .+. +|.||||+|+|+|++|
T Consensus 109 ~~i~A~D~Gt~~~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~---~G~~~L~GktV~V~G~G~VG 185 (364)
T 1leh_A 109 RYITAEDVGTTVDDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEA---FGSDSLEGLAVSVQGLGNVA 185 (364)
T ss_dssp SEEBCBCTTCCHHHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH---HSSCCCTTCEEEEECCSHHH
T ss_pred ceEEcccCCCCHHHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhh---ccccCCCcCEEEEECchHHH
Confidence 57766667776655555554310122111 0000012345555555555555541 133 7999999999999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCC
Q 044056 156 VELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 156 ~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+.+|++|..+|++|+++|++..
T Consensus 186 ~~~A~~L~~~GakVvv~D~~~~ 207 (364)
T 1leh_A 186 KALCKKLNTEGAKLVVTDVNKA 207 (364)
T ss_dssp HHHHHHHHHTTCEEEEECSCHH
T ss_pred HHHHHHHHHCCCEEEEEcCCHH
Confidence 9999999999999999998653
No 55
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.96 E-value=2.1e-05 Score=67.37 Aligned_cols=122 Identities=13% Similarity=0.062 Sum_probs=74.7
Q ss_pred cCCCeEEecCCCCCHHHHhcC-CCCeEEEEcCCCCCcCChhHHhhCCeEEEe---cCCCCC----CCchhHHHHHH--HH
Q 044056 56 YASYGTSEQMIASDSNVITRA-NPMNLIIRFRVGLEGVDIDALTNCAIKAAR---ILGDVS----GNAASCAELSI--YL 125 (189)
Q Consensus 56 ~~~advi~~~~~~~~~~l~~~-p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n---~~g~~~----~~a~~vAE~~l--~l 125 (189)
..++|+|+.-.+++++-++.+ |+--++....-.-|.=-++.+.++||...- .|..+- .-=.++||.+= +.
T Consensus 88 ~~~adiIlkVk~p~~~e~~~l~~g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~Av 167 (405)
T 4dio_A 88 AKTADVILKVRRPSAQEISGYRSGAVVIAIMDPYGNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQAV 167 (405)
T ss_dssp GGGCSEEEEEECCCTTTGGGSCTTCEEEEECCCTTCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHHH
T ss_pred hccCCEEEEeCCCChhHHhhcCCCcEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHHH
Confidence 345788443233344445656 456666655554444445778889988743 232100 00124555553 22
Q ss_pred HHHHHhcCCC------CCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 126 MLGLLRKHIV------PTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 126 iL~~~R~~~~------~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+.+. ..+.. .....+.+.+|+|+|+|.||..+|+.+++||++|++||+++..
T Consensus 168 ~~aa-~~l~~~~~~l~t~~g~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~ 225 (405)
T 4dio_A 168 IDAA-YEYDRALPMMMTAAGTVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAA 225 (405)
T ss_dssp HHHH-HHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTH
T ss_pred HHHH-HHhHhhhchhhccCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 2222 22221 1123578999999999999999999999999999999998754
No 56
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.96 E-value=7.2e-05 Score=62.94 Aligned_cols=119 Identities=12% Similarity=-0.035 Sum_probs=77.0
Q ss_pred CCeEEe-cCCCCCHHHHhcCCCCeEEEEcCCCCCcCChhHHhhCCeEEEec---CCC---CCCCchhHHHHHH--HHHHH
Q 044056 58 SYGTSE-QMIASDSNVITRANPMNLIIRFRVGLEGVDIDALTNCAIKAARI---LGD---VSGNAASCAELSI--YLMLG 128 (189)
Q Consensus 58 ~advi~-~~~~~~~~~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~---~g~---~~~~a~~vAE~~l--~liL~ 128 (189)
++|+|+ ...|...+.....+++.++......++.-.++.+.+.|+...|. |.- .. .-.+++|.+- +.++.
T Consensus 66 ~ad~i~~vksP~~~~~~~~~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~-~l~~~s~~Ag~~a~~~g 144 (361)
T 1pjc_A 66 SREMVVKVKEPLPAEYDLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLP-LLTPMSIIAGRLSVQFG 144 (361)
T ss_dssp TSSEEECSSCCCGGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCT-TTHHHHHHHHHHHHHHH
T ss_pred cCCeEEEECCCCHHHHHhhcCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCcc-ccCcchHHHHHHHHHHH
Confidence 688843 44454444333346776766666666654567788888888754 331 01 2245666555 44444
Q ss_pred HHhcCCC--------CCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 129 LLRKHIV--------PTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 129 ~~R~~~~--------~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...-... .....+.+++|.|+|.|.+|+.+++.++.+|++|+++||++.
T Consensus 145 A~nt~~~~~g~G~~l~~l~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~ 201 (361)
T 1pjc_A 145 ARFLERQQGGRGVLLGGVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVE 201 (361)
T ss_dssp HHHTSGGGTSCCCCTTCBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred HHHHhhccCCCceeccCCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 4221110 111347889999999999999999999999999999999854
No 57
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.80 E-value=1.7e-05 Score=63.09 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=34.0
Q ss_pred CCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 136 PTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
....++.+++|||||+|.+|+.+|+.|...|.+|.+|||++..
T Consensus 12 ~~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 12 HENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred ccccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 3467889999999999999999999999999999999998654
No 58
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.73 E-value=8.5e-06 Score=66.10 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=70.8
Q ss_pred CCeEEecCCCCCHHHHhcCCCCeEEEEcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCC
Q 044056 58 SYGTSEQMIASDSNVITRANPMNLIIRFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPT 137 (189)
Q Consensus 58 ~advi~~~~~~~~~~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~ 137 (189)
+.+++..+.|...+++..++.+.-.+....++|.++. +.|-. .|+ |.+.. +++.++.|.
T Consensus 65 ~~~G~nvtiP~k~~i~~~ld~l~~~A~~~gavnti~~----~~g~~----~g~---nTd~~-----G~~~~l~~~----- 123 (275)
T 2hk9_A 65 KVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKF----ENGKA----YGY---NTDWI-----GFLKSLKSL----- 123 (275)
T ss_dssp TCCEEEECTTSTTTTGGGCSEECHHHHHHTCCCEEEE----ETTEE----EEE---CCHHH-----HHHHHHHHH-----
T ss_pred CCCEEEECccCHHHHHHHHHHhhHHHHHhCCcceEEe----eCCEE----Eee---cCCHH-----HHHHHHHHh-----
Confidence 3556433567888888888877777777778887753 34522 233 33222 455555442
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+.++.+++++|||+|.+|+++|+.|...|++|..|+|+..
T Consensus 124 ~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~ 163 (275)
T 2hk9_A 124 IPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKE 163 (275)
T ss_dssp CTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHH
T ss_pred CCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHH
Confidence 3468899999999999999999999999999999999853
No 59
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=97.67 E-value=4.2e-05 Score=59.46 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=32.2
Q ss_pred CCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 137 TGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...++..++|+|||+|.+|+.+|+.|...|.+|.+|||+..
T Consensus 13 ~~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 13 ENLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred cccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 34578899999999999999999999999999999999754
No 60
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=97.60 E-value=2.6e-05 Score=65.11 Aligned_cols=40 Identities=33% Similarity=0.449 Sum_probs=35.9
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
..+.+++|||||+|.||+.+|+.|+..|++|++|+|+...
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~ 51 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSA 51 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHH
Confidence 3567899999999999999999999999999999998654
No 61
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.59 E-value=4.8e-05 Score=55.33 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=33.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+++|+|+|.|.+|+.+++.|..+|++|..|+|+...
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~ 56 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDH 56 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHH
Confidence 899999999999999999999999999999998543
No 62
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.59 E-value=6.7e-05 Score=55.25 Aligned_cols=42 Identities=17% Similarity=0.253 Sum_probs=35.2
Q ss_pred CCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
......+++|.|+|+|.+|+.+|+.|+..|.+|+++++++..
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 445677899999999999999999999999999999987654
No 63
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=96.66 E-value=1.3e-05 Score=62.16 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=34.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+.+++|||||+|++|+.+|+.|..+|++|.+|+|+..
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 6788999999999999999999999999999999865
No 64
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.43 E-value=0.00012 Score=60.23 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=35.6
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
.....-++|||||+|.+|+.+|+.|...|.+|.+|||++...
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~ 57 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKC 57 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 345556899999999999999999999999999999987543
No 65
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.39 E-value=0.00012 Score=59.72 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=34.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCcc
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASHS 180 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~~ 180 (189)
.++|||||+|.+|+.+|+.|...|.+|.+|||++....
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~ 52 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMT 52 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 36899999999999999999999999999999877543
No 66
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.37 E-value=0.00018 Score=59.36 Aligned_cols=38 Identities=34% Similarity=0.391 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCC--EEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGV--KIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~--~V~~~~r~~~ 177 (189)
++.-++|||||+|.||..+|+.++..|. +|++|||++.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 3445899999999999999999999999 9999999864
No 67
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.37 E-value=0.00021 Score=60.33 Aligned_cols=40 Identities=30% Similarity=0.311 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..-+.||||||+|.|.+|+.+++.++.+|++|+++|+++.
T Consensus 9 ~~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 9 RIILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 3457899999999999999999999999999999998754
No 68
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.32 E-value=0.00018 Score=59.41 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=34.5
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
....++|||||+|.+|+.+|+.|...|.+|.+|||++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~ 66 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPAR 66 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence 345679999999999999999999999999999998653
No 69
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.31 E-value=0.00013 Score=54.90 Aligned_cols=39 Identities=23% Similarity=0.195 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccC-CCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPF-GVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~af-G~~V~~~~r~~~ 177 (189)
.++.+++|+|+|+|.+|+.+|+.|+.. |.+|.++|+++.
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 457788999999999999999999998 999999998754
No 70
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.27 E-value=0.00015 Score=51.76 Aligned_cols=38 Identities=21% Similarity=0.386 Sum_probs=32.4
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.+.++++.|+|+|.+|+.+++.|...|.+|..+|+...
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~ 40 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEE 40 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHH
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35678999999999999999999999999999998643
No 71
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.27 E-value=0.00023 Score=59.92 Aligned_cols=38 Identities=18% Similarity=0.367 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+..++|||||+|.+|+.+|+.|...|.+|.+|||++..
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~ 57 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNA 57 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 34689999999999999999999999999999998643
No 72
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.24 E-value=0.00022 Score=62.44 Aligned_cols=37 Identities=27% Similarity=0.419 Sum_probs=32.4
Q ss_pred CCCCC-CEEEEEcCCHHHHHHHHHHccC------CCEEEEEcCC
Q 044056 139 ETLLG-KTVFISGFGNIGVELAKRLRPF------GVKIIAAKRS 175 (189)
Q Consensus 139 ~~l~g-ktvGIvG~G~IG~~vA~~l~af------G~~V~~~~r~ 175 (189)
..|.| |+|||||+|.+|.++|+.|+.. |++|++..+.
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~ 92 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRK 92 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECT
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCC
Confidence 56889 9999999999999999999977 9998866554
No 73
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.23 E-value=0.00022 Score=51.32 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+++.|+|+|.+|+.+|+.|...|.+|+++|+.+.
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 3467899999999999999999999999999998754
No 74
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.22 E-value=0.00033 Score=49.73 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=31.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+++|+|+|+|.+|+.+|+.|...|.+|..+|+++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~ 38 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKD 38 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 57899999999999999999999999999998754
No 75
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.21 E-value=0.00025 Score=51.27 Aligned_cols=36 Identities=17% Similarity=0.412 Sum_probs=32.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
..++.|+|+|.+|+.+|+.|+..|.+|+++|+.+..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~ 42 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTR 42 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence 357999999999999999999999999999997653
No 76
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.00026 Score=58.41 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=32.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCC-CEEEEEcCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFG-VKIIAAKRSW 176 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG-~~V~~~~r~~ 176 (189)
.++|||||+|.+|..+|+.|...| .+|.+|||++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 368999999999999999999999 9999999986
No 77
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.17 E-value=0.00031 Score=57.34 Aligned_cols=36 Identities=28% Similarity=0.316 Sum_probs=32.8
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++||||| +|.||..+|+.++..|.+|.+|||+..
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 357899999 999999999999999999999998754
No 78
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.15 E-value=0.00038 Score=47.91 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCC-CEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFG-VKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG-~~V~~~~r~~~~ 178 (189)
.+++|+|+|.|.||+.+++.|...| .+|..++|++..
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~ 41 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAA 41 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHH
Confidence 4689999999999999999999999 899999997543
No 79
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.10 E-value=0.00032 Score=54.60 Aligned_cols=36 Identities=31% Similarity=0.329 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++|+|+|+|.+|+.+|+.+...|.+|.+|+|+..
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~ 62 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPK 62 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457899999999999999999999999999999754
No 80
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.00 E-value=0.00037 Score=57.03 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=32.3
Q ss_pred CEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++|||||+|.+|+.+|+.+...|.+|.+|||+...
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~ 65 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEK 65 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 68999999999999999999999999999998654
No 81
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=96.99 E-value=0.00084 Score=48.88 Aligned_cols=48 Identities=15% Similarity=0.235 Sum_probs=39.3
Q ss_pred CCCCCEEEEEcC----CHHHHHHHHHHccCCCEEEEEcCCCCCcccccccCC
Q 044056 140 TLLGKTVFISGF----GNIGVELAKRLRPFGVKIIAAKRSWASHSQVCCQSS 187 (189)
Q Consensus 140 ~l~gktvGIvG~----G~IG~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~ 187 (189)
-.+-++|+|||+ |++|..+++.+...|++|+.+++...+..+..+++|
T Consensus 11 l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s 62 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRS 62 (138)
T ss_dssp ---CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSS
T ss_pred ccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCC
Confidence 455789999999 999999999999999999999998766666666654
No 82
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.96 E-value=0.00051 Score=56.48 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
..++|||||+|.+|..+|+.|...|. +|.+|||++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 45799999999999999999999999 999999973
No 83
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.83 E-value=0.00043 Score=53.97 Aligned_cols=36 Identities=36% Similarity=0.373 Sum_probs=32.3
Q ss_pred CEEEEEcCCHHHHHHHHHHccCCCEEEE-EcCCCCCc
Q 044056 144 KTVFISGFGNIGVELAKRLRPFGVKIIA-AKRSWASH 179 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~afG~~V~~-~~r~~~~~ 179 (189)
++|||||+|++|+.+|+.+...|.+|.+ |+|++...
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~ 60 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASL 60 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHH
Confidence 6899999999999999999988999999 99986543
No 84
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.81 E-value=0.0014 Score=52.68 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=35.8
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++.++++.|+|.|.+|+++|+.|...|.+|..++|+..
T Consensus 115 ~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~ 153 (271)
T 1nyt_A 115 FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVS 153 (271)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHH
Confidence 467899999999999999999999999999999999853
No 85
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.80 E-value=0.0017 Score=53.15 Aligned_cols=39 Identities=26% Similarity=0.233 Sum_probs=35.9
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
.++.+++++|+|.|.+|++++..|...|+ +|..++|+..
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ 176 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVE 176 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHH
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 46789999999999999999999999998 9999999853
No 86
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.76 E-value=0.00089 Score=58.48 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
...+.++|||||+|.+|+.+|+.|...|.+|.+|||++..
T Consensus 11 ~~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~ 50 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREK 50 (480)
T ss_dssp ----CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHH
T ss_pred cccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence 4456789999999999999999999999999999998654
No 87
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.66 E-value=0.0016 Score=52.93 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=32.0
Q ss_pred CEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++|+|||+|.+|..+|..+..-|.+|+.||++...
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~ 50 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDI 50 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 68999999999999999999889999999998543
No 88
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.66 E-value=0.001 Score=54.09 Aligned_cols=42 Identities=19% Similarity=0.216 Sum_probs=37.7
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCCc
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWASH 179 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~~ 179 (189)
+.++.||++.|+|.|.+|++++..|...|+ +|..++|+..+.
T Consensus 112 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a 154 (277)
T 3don_A 112 YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRF 154 (277)
T ss_dssp STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGG
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHH
Confidence 456889999999999999999999999999 899999987553
No 89
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=96.61 E-value=0.0012 Score=48.47 Aligned_cols=45 Identities=13% Similarity=0.083 Sum_probs=38.0
Q ss_pred CCEEEEEcC----CHHHHHHHHHHccCCCEEEEEcCCC--CCcccccccCC
Q 044056 143 GKTVFISGF----GNIGVELAKRLRPFGVKIIAAKRSW--ASHSQVCCQSS 187 (189)
Q Consensus 143 gktvGIvG~----G~IG~~vA~~l~afG~~V~~~~r~~--~~~~~~~~~~~ 187 (189)
-++|+|||+ |++|..+++.+...|++|+.+++.. .+..+..+++|
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~s 63 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYAT 63 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCC
Confidence 478999999 8999999999999999999999987 55566666554
No 90
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.40 E-value=0.0043 Score=50.43 Aligned_cols=41 Identities=24% Similarity=0.299 Sum_probs=36.9
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
+.++.++++.|+|.|.+|++++..|...|+ +|..++|+..+
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~ 162 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAK 162 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHH
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHH
Confidence 457899999999999999999999999997 89999998643
No 91
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.33 E-value=0.0051 Score=49.81 Aligned_cols=38 Identities=26% Similarity=0.279 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++.+|++.|+|.|.||+++|+.|...| +|..++|+..
T Consensus 124 ~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~ 161 (287)
T 1nvt_A 124 GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVE 161 (287)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHH
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHH
Confidence 3678999999999999999999999999 9999999753
No 92
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.33 E-value=0.0029 Score=50.94 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+.++.+++++|+|.|.+|+++|..|...|.+|..++|+..
T Consensus 114 ~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~ 153 (272)
T 1p77_A 114 NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFS 153 (272)
T ss_dssp TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHH
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3467899999999999999999999999999999999853
No 93
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.31 E-value=0.0045 Score=50.07 Aligned_cols=37 Identities=24% Similarity=0.274 Sum_probs=34.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
++++.|+|.|.+|++++..|...|.+|..++|+..+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka 154 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGL 154 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 8999999999999999999999999999999997654
No 94
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.31 E-value=0.0026 Score=52.39 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCC----CEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFG----VKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG----~~V~~~~r~~~ 177 (189)
...+|||||+|.+|..+|+.|..-| .+|.+|+|+..
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 3468999999999999999998888 78999999864
No 95
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.29 E-value=0.0097 Score=51.36 Aligned_cols=54 Identities=24% Similarity=0.398 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEc
Q 044056 116 ASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAK 173 (189)
Q Consensus 116 ~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~ 173 (189)
++++-=++..+-.+++. .+.++.|+||.|.|+|++|+.+|++|..+|++|++..
T Consensus 212 ~aTg~Gv~~~~~~~~~~----~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavs 265 (440)
T 3aog_A 212 DATGRGVFITAAAAAEK----IGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQ 265 (440)
T ss_dssp THHHHHHHHHHHHHHHH----HTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cchHHHHHHHHHHHHHh----cCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEE
Confidence 45565566566666654 4568999999999999999999999999999999443
No 96
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.22 E-value=0.0058 Score=50.68 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=35.9
Q ss_pred CCCCCCCCEEEEEcCCHH-HHHHHHHHccCCCEEEEEcCC
Q 044056 137 TGETLLGKTVFISGFGNI-GVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~I-G~~vA~~l~afG~~V~~~~r~ 175 (189)
.+.++.|+++.|||.|.+ |+.+|+.|.+.|++|...+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 466899999999999986 999999999999999999886
No 97
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.20 E-value=0.0061 Score=52.98 Aligned_cols=64 Identities=17% Similarity=0.093 Sum_probs=46.9
Q ss_pred CchhHHHHHHHHHHHHHhcCC---CCC-------CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 114 NAASCAELSIYLMLGLLRKHI---VPT-------GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 114 ~a~~vAE~~l~liL~~~R~~~---~~~-------~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
|-..|.|.+.++++...|... .+. ...-.=++|||||+|.+|..+|..+..-|.+|..||++..
T Consensus 15 ~~~~~~~~~~~~~~~a~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 15 NLYFQGSEVRSYLMEAHSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp GGGGCBCHHHHHHHHTTCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred chhhhhHHHHHHHHhHHHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 445666777777777666653 111 1111227899999999999999999989999999999865
No 98
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.18 E-value=0.0054 Score=52.90 Aligned_cols=41 Identities=20% Similarity=0.179 Sum_probs=32.9
Q ss_pred CCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+++..-++|+|||+|.+|..+|..+.. |.+|++||+.+..
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~ 70 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAK 70 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHH
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHH
Confidence 4566667899999999999999999988 9999999998654
No 99
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.18 E-value=0.0096 Score=51.13 Aligned_cols=54 Identities=30% Similarity=0.281 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEc
Q 044056 116 ASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAK 173 (189)
Q Consensus 116 ~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~ 173 (189)
++++--++..+-..+|. .+.++.|+||.|.|+|++|+.+|++|..+|++|++..
T Consensus 187 ~aTg~Gv~~~~~~~~~~----~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavs 240 (421)
T 1v9l_A 187 YATGFGVAVATREMAKK----LWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVS 240 (421)
T ss_dssp GHHHHHHHHHHHHHHHH----HHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEE
T ss_pred cchHHHHHHHHHHHHHh----cCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 45666666666666665 4568999999999999999999999999999999543
No 100
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.17 E-value=0.0058 Score=50.53 Aligned_cols=39 Identities=26% Similarity=0.359 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
+.++.||++.|+|.|.+|++++..|...|+ +|..++|+.
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 567899999999999999999999999999 899999983
No 101
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.16 E-value=0.0064 Score=49.17 Aligned_cols=42 Identities=24% Similarity=0.296 Sum_probs=37.3
Q ss_pred CCCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
.+.++.||++.|+|.|.+|++++..|...|+ +|..++|+..+
T Consensus 114 ~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~ 156 (272)
T 3pwz_A 114 LGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAK 156 (272)
T ss_dssp SCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHH
T ss_pred cCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 3567899999999999999999999999996 89999998643
No 102
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.16 E-value=0.0041 Score=51.78 Aligned_cols=33 Identities=18% Similarity=0.127 Sum_probs=30.9
Q ss_pred EEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 145 TVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 145 tvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+|+|||+|.+|..+|..|..-|.+|.+|+|+..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 49 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEE 49 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 899999999999999999988999999999753
No 103
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.16 E-value=0.0098 Score=51.09 Aligned_cols=55 Identities=18% Similarity=0.240 Sum_probs=45.6
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEc
Q 044056 115 AASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAK 173 (189)
Q Consensus 115 a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~ 173 (189)
.++++--++..+-..++. .+.++.|+||.|.|+|++|+.+|++|..+|++|++..
T Consensus 188 ~~aTg~Gv~~~~~~~~~~----~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavs 242 (421)
T 2yfq_A 188 NEATGFGVAVVVRESAKR----FGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIA 242 (421)
T ss_dssp TTHHHHHHHHHHHHHHHH----TTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECC
T ss_pred CcchHHHHHHHHHHHHHh----cCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 356676777677777775 4568999999999999999999999999999999554
No 104
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.13 E-value=0.012 Score=50.50 Aligned_cols=56 Identities=20% Similarity=0.448 Sum_probs=45.5
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEE-EEcC
Q 044056 115 AASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKII-AAKR 174 (189)
Q Consensus 115 a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~-~~~r 174 (189)
.++++--++..+-..++. .+.++.|+||.|.|+|++|+.+|+.|...|++|+ ..|+
T Consensus 194 ~~aTg~Gv~~~~~~~~~~----~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 194 DDAAGLGALLVLEALAKR----RGLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp SCHHHHHHHHHHHHHHHH----HTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ccchHHHHHHHHHHHHHh----cCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 356666666666666665 4568999999999999999999999999999999 4444
No 105
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.10 E-value=0.015 Score=50.33 Aligned_cols=54 Identities=24% Similarity=0.409 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEc
Q 044056 116 ASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAK 173 (189)
Q Consensus 116 ~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~ 173 (189)
++++--++..+-.+++. .+.++.|+||.|=|+|++|+.+|++|...|++|++.+
T Consensus 212 ~aTg~Gv~~~~~~~~~~----~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavs 265 (450)
T 4fcc_A 212 EATGYGLVYFTEAMLKR----HGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITAS 265 (450)
T ss_dssp THHHHHHHHHHHHHHHH----TTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CceeeeHHHHHHHHHHH----cCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEe
Confidence 45555555555555554 4568999999999999999999999999999998765
No 106
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.05 E-value=0.0053 Score=47.54 Aligned_cols=43 Identities=21% Similarity=0.248 Sum_probs=33.5
Q ss_pred CCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 136 PTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.....+.|++|.|.|. |.||+++++.|..-|.+|++.+|+..+
T Consensus 14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~ 57 (236)
T 3e8x_A 14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQ 57 (236)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHH
Confidence 3456899999999997 999999999999999999999998654
No 107
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.02 E-value=0.0076 Score=51.48 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=34.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
-+.+++|+|+|-|.+|+.+++.++.+|.+|+.+|+.+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 46799999999999999999999999999999997654
No 108
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.00 E-value=0.01 Score=50.98 Aligned_cols=55 Identities=29% Similarity=0.399 Sum_probs=45.5
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEc
Q 044056 115 AASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAK 173 (189)
Q Consensus 115 a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~ 173 (189)
.++++--++..+-..++. .+.++.|+||.|-|+|++|+.+|++|..+|++|++.+
T Consensus 197 ~~aTg~Gv~~~~~~~~~~----~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavs 251 (424)
T 3k92_A 197 ETATAQGVTICIEEAVKK----KGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGIS 251 (424)
T ss_dssp TTHHHHHHHHHHHHHHHH----TTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred cccHHHHHHHHHHHHHHH----cCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 356777777777777775 3568999999999999999999999999999987543
No 109
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.98 E-value=0.0086 Score=48.67 Aligned_cols=40 Identities=25% Similarity=0.252 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
.++.+|++.|+|.|.+|++++..|...|+ +|..++|+..+
T Consensus 123 ~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~ 163 (283)
T 3jyo_A 123 PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSR 163 (283)
T ss_dssp TTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHH
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHH
Confidence 46889999999999999999999999999 69999998643
No 110
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=95.96 E-value=0.0065 Score=44.15 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=37.5
Q ss_pred CCEEEEEcC----CHHHHHHHHHHccCCCEEEEEcCC--CCCcccccccCC
Q 044056 143 GKTVFISGF----GNIGVELAKRLRPFGVKIIAAKRS--WASHSQVCCQSS 187 (189)
Q Consensus 143 gktvGIvG~----G~IG~~vA~~l~afG~~V~~~~r~--~~~~~~~~~~~~ 187 (189)
-++|.|||. |+.|..+++.++..|++|+..++. ..+..+..++.|
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~s 63 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVAS 63 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSS
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCC
Confidence 478999999 899999999999999998888887 555556666544
No 111
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.95 E-value=0.006 Score=50.94 Aligned_cols=37 Identities=30% Similarity=0.414 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.|++|.|+|.|.||..+++.++.+|++|++.+++...
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~ 223 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSK 223 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 6899999999999999999999999999999987543
No 112
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=95.94 E-value=0.0064 Score=49.91 Aligned_cols=38 Identities=13% Similarity=0.109 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHc-cCCC-EEEEEcCCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLR-PFGV-KIIAAKRSWAS 178 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~-afG~-~V~~~~r~~~~ 178 (189)
...++|||||+|.+|+.+++.+. .+|. +|..|||++..
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~ 172 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKEN 172 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHH
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHH
Confidence 35789999999999999999986 4587 89999998543
No 113
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.94 E-value=0.0087 Score=43.61 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=37.1
Q ss_pred CCEEEEEcC----CHHHHHHHHHHccCCCEEEEEcCCCCCcccccccCC
Q 044056 143 GKTVFISGF----GNIGVELAKRLRPFGVKIIAAKRSWASHSQVCCQSS 187 (189)
Q Consensus 143 gktvGIvG~----G~IG~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~ 187 (189)
-++|+|||. |++|..+++.++..|++|+..++...+..+..++.|
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~s 70 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPS 70 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSS
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCC
Confidence 478999999 799999999999999999888887655556666543
No 114
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.92 E-value=0.0087 Score=49.44 Aligned_cols=40 Identities=23% Similarity=0.333 Sum_probs=35.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCcc
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASHS 180 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~~ 180 (189)
-.|.+|.|+|.|.||...++.++.+|++|++.+++..+.+
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~ 214 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQ 214 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 3589999999999999999999999999999998766543
No 115
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.92 E-value=0.0065 Score=47.80 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=37.8
Q ss_pred CCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 136 PTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+...++.|++|.|||.|.+|...++.|...|++|..+++...
T Consensus 24 Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~ 65 (223)
T 3dfz_A 24 TVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVS 65 (223)
T ss_dssp EEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred ccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 345689999999999999999999999999999999998654
No 116
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.91 E-value=0.0068 Score=49.95 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
...+|+|||+|++|..+|..|..-|.+|..|+|++..
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~ 49 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEI 49 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence 3578999999999999999998889999999997543
No 117
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.91 E-value=0.022 Score=48.78 Aligned_cols=55 Identities=22% Similarity=0.198 Sum_probs=45.0
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHcc-CCCEEEEEc
Q 044056 115 AASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRP-FGVKIIAAK 173 (189)
Q Consensus 115 a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~a-fG~~V~~~~ 173 (189)
.++++-=++..+-..+|. .+.++.|++|.|.|+|++|+.+|++|.. .|++|++..
T Consensus 185 ~~aTg~Gv~~~~~~~~~~----~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavs 240 (415)
T 2tmg_A 185 EEATGRGVKVCAGLAMDV----LGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVS 240 (415)
T ss_dssp TTHHHHHHHHHHHHHHHH----TTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CcchHHHHHHHHHHHHHH----cCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEE
Confidence 356666666667677765 4568999999999999999999999998 999999543
No 118
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.86 E-value=0.0083 Score=51.99 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=32.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
=++|||||+|.+|..+|..+..-|.+|+.||++..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36899999999999999999999999999998753
No 119
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.82 E-value=0.0087 Score=48.70 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=37.0
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
+.++.++++.|+|.|..|++++..|...|+ +|..++|+..+
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~k 158 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEK 158 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHH
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 456889999999999999999999999999 89999998643
No 120
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.81 E-value=0.006 Score=50.84 Aligned_cols=37 Identities=32% Similarity=0.513 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.+.|++|.|+|.|.||..+++.++.+|++|++.+++.
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRRE 214 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 5669999999999999999999999999999999876
No 121
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.80 E-value=0.011 Score=48.80 Aligned_cols=39 Identities=23% Similarity=0.299 Sum_probs=36.1
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
+.++.||++.|+|.|.+|++++..|...|+ +|..++|+.
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 567899999999999999999999999999 799999983
No 122
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.75 E-value=0.0074 Score=48.26 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
.+.| +++|+|.|..|++++..|...|+ +|..++|+..+
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~k 144 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIER 144 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHH
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 4678 99999999999999999999999 89999998643
No 123
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.73 E-value=0.0056 Score=48.71 Aligned_cols=38 Identities=26% Similarity=0.400 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
..|.+++|.|+|+|.+|..+|+.|...|. +|..+|+..
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 46789999999999999999999999998 799999875
No 124
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=95.71 E-value=0.012 Score=49.42 Aligned_cols=40 Identities=23% Similarity=0.169 Sum_probs=32.2
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
..+=++++|+|+|+|.+|+.+|+.|... .+|..+||+..+
T Consensus 11 ~~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~ 50 (365)
T 2z2v_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNEN 50 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHH
T ss_pred cccCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHH
Confidence 4566789999999999999999999877 899999998654
No 125
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.70 E-value=0.0088 Score=49.70 Aligned_cols=38 Identities=29% Similarity=0.316 Sum_probs=34.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
.|++|.|+|.|.||...++.++.+|++|++.+++....
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~ 216 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR 216 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 48999999999999999999999999999999876553
No 126
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.67 E-value=0.0087 Score=50.15 Aligned_cols=35 Identities=26% Similarity=0.188 Sum_probs=32.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++|+|||.|.+|..+|..|..-|.+|..|+|.+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 36899999999999999999999999999999743
No 127
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=95.66 E-value=0.0047 Score=51.76 Aligned_cols=34 Identities=18% Similarity=0.075 Sum_probs=30.3
Q ss_pred CEEEEEcCCHHHHHHHHHHccCC-------CEEEEEcCCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPFG-------VKIIAAKRSWA 177 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~afG-------~~V~~~~r~~~ 177 (189)
++|+|||+|.+|..+|..|..-| .+|..|+|+..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999997666 89999999865
No 128
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.46 E-value=0.024 Score=49.25 Aligned_cols=53 Identities=21% Similarity=0.359 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEE
Q 044056 116 ASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAA 172 (189)
Q Consensus 116 ~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~ 172 (189)
++++--++..+-.+++. .+.++.|+||.|-|+|++|+.+|++|..+|++|++.
T Consensus 229 ~aTg~Gv~~~~~~~l~~----~G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVav 281 (470)
T 2bma_A 229 EATGYGLVYFVLEVLKS----LNIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTL 281 (470)
T ss_dssp THHHHHHHHHHHHHHHT----TTCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEE
T ss_pred ccchHHHHHHHHHHHHh----ccCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEE
Confidence 45555566566666664 357899999999999999999999999999999843
No 129
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.44 E-value=0.043 Score=44.56 Aligned_cols=57 Identities=14% Similarity=0.101 Sum_probs=44.0
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHH-HHHHHHHHccC--CCEEEEEcCCCCC
Q 044056 114 NAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNI-GVELAKRLRPF--GVKIIAAKRSWAS 178 (189)
Q Consensus 114 ~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~I-G~~vA~~l~af--G~~V~~~~r~~~~ 178 (189)
+...+++-++-++-. .+.++.||++.|||.|+| |+.+|+.|... |++|...+++.+.
T Consensus 137 ~~PcTp~gi~~ll~~--------~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~ 196 (281)
T 2c2x_A 137 PLPCTPRGIVHLLRR--------YDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRD 196 (281)
T ss_dssp CCCHHHHHHHHHHHH--------TTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSC
T ss_pred CCCChHHHHHHHHHH--------cCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhH
Confidence 345566654444332 366899999999999986 99999999999 9999999876543
No 130
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.42 E-value=0.012 Score=49.13 Aligned_cols=37 Identities=30% Similarity=0.352 Sum_probs=33.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.|.+|.|+|.|.||...++.++.+|++|++.+++...
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~ 230 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAK 230 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4899999999999999999999999999999987554
No 131
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.40 E-value=0.013 Score=51.18 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=32.1
Q ss_pred CEEEEEcCCHHHHHHHHHHccC-CC-EEEEEcCCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPF-GV-KIIAAKRSWA 177 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~af-G~-~V~~~~r~~~ 177 (189)
++|+|||+|.+|..+|..+... |. +|++||+...
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 6899999999999999999988 99 9999999877
No 132
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.38 E-value=0.02 Score=46.17 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=35.7
Q ss_pred CCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+.++.||++.|+| .|.||+++++.|...|++|+.++|+..
T Consensus 114 ~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~ 154 (287)
T 1lu9_A 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154 (287)
T ss_dssp TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHH
Confidence 3457899999999 999999999999999999999999743
No 133
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.37 E-value=0.058 Score=43.96 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=37.2
Q ss_pred CCCCCCCCEEEEEcCCH-HHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISGFGN-IGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~-IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+.++.|+++.|||.|+ +|+.+|+.|...|++|...+++.+.
T Consensus 153 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~ 195 (288)
T 1b0a_A 153 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN 195 (288)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC
T ss_pred cCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 46789999999999998 5999999999999999999876543
No 134
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=95.34 E-value=0.016 Score=50.67 Aligned_cols=58 Identities=21% Similarity=0.325 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHHHHhcCC----CCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEc
Q 044056 116 ASCAELSIYLMLGLLRKHI----VPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAK 173 (189)
Q Consensus 116 ~~vAE~~l~liL~~~R~~~----~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~ 173 (189)
++++--++..+-.+++... .....+|.|+||.|-|+|++|+..|+.|..+|++|++.+
T Consensus 213 eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavs 274 (501)
T 3mw9_A 213 SATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVG 274 (501)
T ss_dssp THHHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CchHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 4566556655554433210 111236999999999999999999999999999999753
No 135
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.28 E-value=0.017 Score=47.10 Aligned_cols=42 Identities=24% Similarity=0.236 Sum_probs=37.3
Q ss_pred CCCCCCCCEEEEEcCCH-HHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISGFGN-IGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~-IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
...++.||++.|||.|. +|+.+|..|...|++|...+++.+.
T Consensus 154 ~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~ 196 (285)
T 3p2o_A 154 YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD 196 (285)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSC
T ss_pred hCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 46789999999999998 5999999999999999999876543
No 136
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.26 E-value=0.032 Score=45.33 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=37.3
Q ss_pred CCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 136 PTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.....+.+++|.|.|. |.||+++++.|..-|.+|++.+|....
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATG 56 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSS
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 4567899999999987 999999999999999999999986543
No 137
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=95.25 E-value=0.031 Score=48.38 Aligned_cols=52 Identities=33% Similarity=0.590 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEE
Q 044056 116 ASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKIIA 171 (189)
Q Consensus 116 ~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~ 171 (189)
++++--++..+-..+|. .+.++.|+||.|.|+|++|+.+|++|...|++|++
T Consensus 207 ~aTg~Gv~~~~~~~~~~----~G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVa 258 (449)
T 1bgv_A 207 EATGYGSVYYVEAVMKH----ENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVT 258 (449)
T ss_dssp THHHHHHHHHHHHHHHH----TTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEE
T ss_pred cchhHHHHHHHHHHHHH----ccCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 45666666666666665 35789999999999999999999999999999996
No 138
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.21 E-value=0.025 Score=48.98 Aligned_cols=55 Identities=20% Similarity=0.346 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEE-EEcC
Q 044056 116 ASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGVKII-AAKR 174 (189)
Q Consensus 116 ~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~-~~~r 174 (189)
++++--++..+-.+++. .+.++.|+||.|-|+|++|+.+|+.|...|++|+ ..|.
T Consensus 216 ~aTg~Gv~~~~~~~~~~----~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~ 271 (456)
T 3r3j_A 216 EATGYGVVYFAENVLKD----LNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDS 271 (456)
T ss_dssp THHHHHHHHHHHHHHHT----TTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECS
T ss_pred cccchHHHHHHHHHHHH----cCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 56777777777777775 3678999999999999999999999999999987 4443
No 139
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.19 E-value=0.017 Score=48.13 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
.|++|.|+|.|.||...++.++.+|+ +|++.+++..+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~ 232 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEK 232 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 58999999999999999999999999 89999887654
No 140
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.18 E-value=0.011 Score=44.50 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=32.8
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|.| .|.||+.+++.++..|++|++.+++..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~ 74 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 74 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 589999999 799999999999999999999998643
No 141
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.16 E-value=0.017 Score=47.96 Aligned_cols=37 Identities=22% Similarity=0.198 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.|.+|.|+|.|.||...++.++.+|++|++.+++..+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~ 216 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKK 216 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHH
Confidence 6899999999999999999999999999999987644
No 142
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.13 E-value=0.019 Score=47.91 Aligned_cols=37 Identities=24% Similarity=0.352 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
.|++|.|+|.|.||...++.++++|+ +|++.+++...
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~ 229 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDK 229 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence 58999999999999999999999999 89999987654
No 143
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.13 E-value=0.021 Score=46.88 Aligned_cols=42 Identities=17% Similarity=0.252 Sum_probs=37.1
Q ss_pred CCCCCCCCEEEEEcCCH-HHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISGFGN-IGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~-IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+.++.|+++.|||.|+ +|+.+|+.|...|++|...+++.+.
T Consensus 159 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~ 201 (301)
T 1a4i_A 159 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH 201 (301)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCccc
Confidence 56789999999999997 6999999999999999999866443
No 144
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.12 E-value=0.019 Score=47.87 Aligned_cols=37 Identities=22% Similarity=0.398 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
.|++|.|+|.|.||...++.++++|+ +|++.+++...
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~ 228 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 58999999999999999999999999 89999987654
No 145
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.07 E-value=0.021 Score=46.47 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=36.5
Q ss_pred CCCCCCCCEEEEEcCCH-HHHHHHHHHccCCCEEEEEcCCCC
Q 044056 137 TGETLLGKTVFISGFGN-IGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~-IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...++.||++.|||.|. +|+.+|..|...|++|...+++.+
T Consensus 155 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~ 196 (285)
T 3l07_A 155 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT 196 (285)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence 46789999999999999 699999999999999999987543
No 146
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.06 E-value=0.023 Score=46.97 Aligned_cols=36 Identities=31% Similarity=0.503 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|+|.|.||...++.++.+|++|++.+++..
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~ 203 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR 203 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 489999999999999999999999999999987644
No 147
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.01 E-value=0.024 Score=46.95 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
.|.+|.|+|.|.||...++.++++|+ +|++.+++..
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 207 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSAT 207 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 48999999999999999999999999 8999987654
No 148
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.00 E-value=0.021 Score=46.99 Aligned_cols=36 Identities=22% Similarity=0.358 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|+|.|.||..+++.++.+|++|++.+++..
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~ 199 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDE 199 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 479999999999999999999999999999998653
No 149
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.99 E-value=0.023 Score=47.27 Aligned_cols=36 Identities=19% Similarity=0.323 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|+|.|.||...++.++.+|++|++.+++..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~ 224 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSRE 224 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCch
Confidence 589999999999999999999999999999998743
No 150
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.98 E-value=0.024 Score=46.45 Aligned_cols=36 Identities=25% Similarity=0.262 Sum_probs=29.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.-..++|+|||.|.+|..+|..|..-|.+|..| +++
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 345689999999999999999999889999999 654
No 151
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.96 E-value=0.03 Score=45.91 Aligned_cols=40 Identities=20% Similarity=0.266 Sum_probs=36.3
Q ss_pred CCCCCCCCEEEEEcCCH-HHHHHHHHHccCCCEEEEEcCCC
Q 044056 137 TGETLLGKTVFISGFGN-IGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~-IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...++.||++.|||.|. +|+.+|..|...|++|..++++.
T Consensus 159 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 159 CGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT 199 (300)
T ss_dssp HTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 46789999999999998 69999999999999999998753
No 152
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.95 E-value=0.017 Score=48.11 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
.|++|.|+|.|.||...++.++++|+ +|++.+++..+
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~ 228 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDK 228 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHH
Confidence 58999999999999999999999999 89999887554
No 153
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.94 E-value=0.014 Score=47.18 Aligned_cols=37 Identities=22% Similarity=0.434 Sum_probs=33.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.|++|.|+|. |.||+.+++.++.+|++|++.+++..+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~ 162 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK 162 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 5899999998 999999999999999999999987544
No 154
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.92 E-value=0.02 Score=47.28 Aligned_cols=36 Identities=28% Similarity=0.365 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
.|++|.|+|.|.||..+++.++.+|+ +|++.+++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~ 203 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDF 203 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 79999999999999999999999999 9999998743
No 155
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.89 E-value=0.018 Score=47.88 Aligned_cols=37 Identities=19% Similarity=0.348 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
.|.+|.|+|.|.||...++.++++|+ +|++.+++..+
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~ 227 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 227 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 58999999999999999999999999 89999987654
No 156
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.84 E-value=0.035 Score=45.20 Aligned_cols=41 Identities=27% Similarity=0.346 Sum_probs=36.5
Q ss_pred CCCCCCCCEEEEEcCCH-HHHHHHHHHccCCCEEEEEcCCCC
Q 044056 137 TGETLLGKTVFISGFGN-IGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~-IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.+.++.||++.|||.|. +|+.+|..|...|++|....++.+
T Consensus 155 ~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~ 196 (286)
T 4a5o_A 155 TGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR 196 (286)
T ss_dssp TTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc
Confidence 46789999999999998 799999999999999999987543
No 157
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.84 E-value=0.025 Score=44.54 Aligned_cols=40 Identities=25% Similarity=0.327 Sum_probs=35.6
Q ss_pred CCCCCCCEEEEEcC-C-HHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-G-NIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G-~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.||++.|.|- | .||+++|+.|..-|++|+..+|+..
T Consensus 17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~ 58 (266)
T 3o38_A 17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHER 58 (266)
T ss_dssp CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHH
Confidence 45689999999998 8 5999999999999999999998754
No 158
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.81 E-value=0.023 Score=46.60 Aligned_cols=37 Identities=30% Similarity=0.412 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
-.|++|.|.|.|.||...++.++.+|++|++.+++..
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~ 201 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDA 201 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3589999999999999999999999999999988654
No 159
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.79 E-value=0.026 Score=45.78 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
-.|++|.|+|.|.||...++.++.+|++|++.+ +..+
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~ 177 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLS 177 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-Chhh
Confidence 358999999999999999999999999999998 5443
No 160
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.78 E-value=0.033 Score=45.90 Aligned_cols=37 Identities=22% Similarity=0.350 Sum_probs=33.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.|++|.|+|. |.||+.+++.++..|++|++.+++...
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~ 206 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGK 206 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHH
Confidence 5899999999 899999999999999999999987543
No 161
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=94.78 E-value=0.021 Score=52.20 Aligned_cols=34 Identities=26% Similarity=0.195 Sum_probs=31.6
Q ss_pred CEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
++|||||+|.+|..+|..+..-|.+|+.||++..
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 5799999999999999999988999999999754
No 162
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=94.71 E-value=0.036 Score=44.93 Aligned_cols=37 Identities=16% Similarity=0.059 Sum_probs=33.8
Q ss_pred CCCCEEEEEcCCH-HHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGN-IGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~-IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+.||++.|||.|. +|+.+|+.|...|++|..++++.+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~ 185 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTK 185 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 9999999999997 799999999999999999987543
No 163
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.54 E-value=0.033 Score=45.49 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=32.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.|++|.|.|. |.||+.+++.++.+|++|++.+++.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 180 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD 180 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5899999998 9999999999999999999999864
No 164
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.54 E-value=0.027 Score=46.31 Aligned_cols=37 Identities=32% Similarity=0.447 Sum_probs=33.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
.|++|.|+|.|.||..+++.++++|+ +|++.+++..+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~ 201 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYR 201 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHH
Confidence 78999999999999999999999999 99999987543
No 165
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.54 E-value=0.028 Score=45.76 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=31.4
Q ss_pred CCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 136 PTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
....+..+|+|.|.|. |.||+.+++.|..-|.+|++.+|....
T Consensus 12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 4567889999999997 999999999999999999999998654
No 166
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.52 E-value=0.023 Score=46.83 Aligned_cols=38 Identities=32% Similarity=0.455 Sum_probs=34.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 141 LLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 141 l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
-.|++|.|.|. |.||..+++.++.+|++|++.+++..+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~ 196 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAA 196 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 35899999998 999999999999999999999987544
No 167
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=94.52 E-value=0.035 Score=42.76 Aligned_cols=39 Identities=31% Similarity=0.412 Sum_probs=34.3
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHccCCC--EEEEEcCCCCCc
Q 044056 141 LLGKTVFISG-FGNIGVELAKRLRPFGV--KIIAAKRSWASH 179 (189)
Q Consensus 141 l~gktvGIvG-~G~IG~~vA~~l~afG~--~V~~~~r~~~~~ 179 (189)
+.++++.|.| .|.||+++++.|..-|. +|++.+|+..+.
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~ 57 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF 57 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc
Confidence 4579999999 79999999999999999 999999986543
No 168
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.46 E-value=0.022 Score=47.60 Aligned_cols=38 Identities=26% Similarity=0.422 Sum_probs=34.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCCc
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWASH 179 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~~ 179 (189)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++..+.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~ 231 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKY 231 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 58999999999999999999999999 899999876543
No 169
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.46 E-value=0.03 Score=47.14 Aligned_cols=36 Identities=28% Similarity=0.417 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
.|++|.|+|.|.||...++.++.+|+ +|++.+++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 221 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPE 221 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence 58999999999999999999999999 9999998654
No 170
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.45 E-value=0.029 Score=45.89 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=33.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|.|. |.||+.+++.++.+|++|++.+++..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 185 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAE 185 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999999 99999999999999999999998753
No 171
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=94.42 E-value=0.019 Score=52.45 Aligned_cols=35 Identities=20% Similarity=0.158 Sum_probs=31.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
=++|||||+|.+|..+|..+..-|.+|+.||++..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 35799999999999999999988999999999754
No 172
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.41 E-value=0.04 Score=46.24 Aligned_cols=36 Identities=31% Similarity=0.503 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
.|++|.|+|.|.||...++.++++|+ +|++.+++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~ 221 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPA 221 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHH
Confidence 58999999999999999999999999 7999987653
No 173
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.41 E-value=0.026 Score=46.34 Aligned_cols=38 Identities=18% Similarity=0.304 Sum_probs=34.3
Q ss_pred CCCEEEEEcCC-HHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 142 LGKTVFISGFG-NIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 142 ~gktvGIvG~G-~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
.|++|.|+|.| .||..+++.++.+|++|++.+++....
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~ 182 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT 182 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 58999999998 999999999999999999999876543
No 174
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.40 E-value=0.033 Score=45.83 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccC--CCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPF--GVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~af--G~~V~~~~r~~~~ 178 (189)
.|++|.|+|.|.||...++.++.+ |++|++.+++..+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~ 208 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKH 208 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHH
Confidence 689999999999999999999999 9999999986543
No 175
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=94.34 E-value=0.059 Score=44.96 Aligned_cols=61 Identities=25% Similarity=0.299 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHHHH--hcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 116 ASCAELSIYLMLGLL--RKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 116 ~~vAE~~l~liL~~~--R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
...||.++-+=|-+. |-++......|++++|.|||+|.+|.++|+.|...|. ++..+|+..
T Consensus 5 ~~~~~~~~~lnl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 5 LKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHHHHHHHHHHHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 356777766555443 4444334467899999999999999999999999998 588888754
No 176
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.34 E-value=0.044 Score=46.19 Aligned_cols=38 Identities=32% Similarity=0.370 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
--.|.+|.|+|.|.||...++.++.+|+ +|++.+++..
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 249 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEV 249 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 3458999999999999999999999999 8999987654
No 177
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.34 E-value=0.065 Score=42.92 Aligned_cols=38 Identities=26% Similarity=0.303 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+|+|.|||-|.||-++|..+..+|.+|..+.+...
T Consensus 142 ~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 142 FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 45579999999999999999999999999999877643
No 178
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.32 E-value=0.034 Score=44.21 Aligned_cols=38 Identities=32% Similarity=0.454 Sum_probs=33.5
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
..|++++|.|+|+|.+|.++|+.|...|. ++..+|+..
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46789999999999999999999999998 688887653
No 179
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.32 E-value=0.027 Score=48.95 Aligned_cols=42 Identities=21% Similarity=0.309 Sum_probs=32.0
Q ss_pred CCCCCCCCCEEEEEcCCHHHHHHHHHHccC-CCEEEEEcCCCC
Q 044056 136 PTGETLLGKTVFISGFGNIGVELAKRLRPF-GVKIIAAKRSWA 177 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~G~IG~~vA~~l~af-G~~V~~~~r~~~ 177 (189)
.....+.+++|+|+|.|.+|+.+++.|... |.+|..++|+..
T Consensus 16 ~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ 58 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLA 58 (467)
T ss_dssp -------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHH
T ss_pred ccccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 345678899999999999999999999876 789999999754
No 180
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=94.30 E-value=0.053 Score=42.46 Aligned_cols=41 Identities=20% Similarity=0.184 Sum_probs=34.3
Q ss_pred CCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 136 PTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
....++.||++.|.|- |.||+++|+.|..-|++|+..+|+.
T Consensus 12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE 53 (249)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3456899999999985 8999999999999999999999874
No 181
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=94.23 E-value=0.043 Score=46.04 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=26.4
Q ss_pred CEEEEEcCCHHHHHHHHHHccC-CCEEEEEcC
Q 044056 144 KTVFISGFGNIGVELAKRLRPF-GVKIIAAKR 174 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~af-G~~V~~~~r 174 (189)
.+|||+|+|+||+++.|.|..- +++|.+.+-
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaind 49 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAIND 49 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 3899999999999999998765 688777764
No 182
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.23 E-value=0.061 Score=44.47 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=33.5
Q ss_pred CCCCEEEEEcCCHHHHHH-HHHH-ccCCCE-EEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVEL-AKRL-RPFGVK-IIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~v-A~~l-~afG~~-V~~~~r~~~ 177 (189)
..+++|.|+|.|.||... ++.+ +.+|++ |++.+++..
T Consensus 171 ~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~ 210 (357)
T 2b5w_A 171 WDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDR 210 (357)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcc
Confidence 344999999999999999 9999 999998 999998765
No 183
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.18 E-value=0.036 Score=45.47 Aligned_cols=36 Identities=22% Similarity=0.400 Sum_probs=33.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|.|. |.||+.+++.++.+|++|++.+++..
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~ 191 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKE 191 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999997 99999999999999999999998643
No 184
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.17 E-value=0.044 Score=45.22 Aligned_cols=36 Identities=28% Similarity=0.446 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~ 202 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKH 202 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHH
Confidence 48999999999999999999999999 7999998654
No 185
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.16 E-value=0.047 Score=42.21 Aligned_cols=39 Identities=26% Similarity=0.127 Sum_probs=33.6
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHccCC-CEEEEEcCCCCCc
Q 044056 141 LLGKTVFISG-FGNIGVELAKRLRPFG-VKIIAAKRSWASH 179 (189)
Q Consensus 141 l~gktvGIvG-~G~IG~~vA~~l~afG-~~V~~~~r~~~~~ 179 (189)
...|+|.|.| .|.||+++++.|..-| .+|+.++|+..+.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~ 61 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh
Confidence 3468999999 7999999999999999 8999999986543
No 186
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.12 E-value=0.053 Score=45.18 Aligned_cols=36 Identities=33% Similarity=0.364 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++..
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 218 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQAT 218 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 48999999999999999999999999 8999987653
No 187
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=94.11 E-value=0.039 Score=45.73 Aligned_cols=36 Identities=25% Similarity=0.283 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccC-CCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPF-GVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~af-G~~V~~~~r~~~ 177 (189)
.|.+|.|+|.|.||...++.++.+ |++|++.+++..
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~ 222 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEE 222 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 589999999999999999999999 999999998654
No 188
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=94.09 E-value=0.049 Score=43.28 Aligned_cols=43 Identities=21% Similarity=0.355 Sum_probs=35.5
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
...++.||++.|.|- |.||+++|+.|..-|++|+..+|.....
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~ 51 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD 51 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc
Confidence 456889999999986 6899999999999999999999876543
No 189
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.08 E-value=0.09 Score=41.84 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=33.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
..+++|.|||-|.||-++|..+..+|.+|..+.|....
T Consensus 150 ~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 150 FRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred cCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 46899999999999999999999999999998876543
No 190
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.07 E-value=0.041 Score=45.75 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
.|++|.|+|.|.||...++.++.+|+ +|++.+++..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~ 226 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVES 226 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHH
Confidence 48999999999999999999999999 6999987654
No 191
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.06 E-value=0.057 Score=44.46 Aligned_cols=36 Identities=25% Similarity=0.493 Sum_probs=33.1
Q ss_pred CCCEEEEE-cCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFIS-GFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIv-G~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|+ |.|.||...++.++.+|++|++.+++..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~ 186 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNE 186 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 68999999 7999999999999999999999998643
No 192
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.05 E-value=0.089 Score=44.73 Aligned_cols=115 Identities=13% Similarity=0.180 Sum_probs=76.0
Q ss_pred HHhhcCCCeE--EecCCCCCHHHHhcC----CCCeEEEEcCCCCCc-CC-hhHHhh-CCeEEEecCCCCCCCchhHHHHH
Q 044056 52 MHSLYASYGT--SEQMIASDSNVITRA----NPMNLIIRFRVGLEG-VD-IDALTN-CAIKAARILGDVSGNAASCAELS 122 (189)
Q Consensus 52 ~~~~~~~adv--i~~~~~~~~~~l~~~----p~Lk~I~~~~aG~d~-id-~~~~~~-~gI~v~n~~g~~~~~a~~vAE~~ 122 (189)
+...+.+.|+ +.....-..|+++.. |..-.|+.--.+-.+ +. ++..++ .+|++.|. +. .-+|=-+
T Consensus 98 Lf~~~agid~~pi~Ldv~~~dEfv~~v~~~~p~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~D-Di-----qGTa~V~ 171 (398)
T 2a9f_A 98 LFKAFAGVDAIPIVLDTKDTEEIISIVKALAPTFGGINLEDISAPRCFEIEQRLIKECHIPVFHD-DQ-----HGTAIVV 171 (398)
T ss_dssp HHHHHSSCEEEEEECCCCCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEH-HH-----HHHHHHH
T ss_pred HHHhccCCceeeeEeCCCCHHHHHHHHHHcCCceeEeccccCCChHHHHHHHHhhhcCCcceecc-hh-----hhHHHHH
Confidence 3344566666 443333344443332 343445444332222 11 123333 36999994 43 5567778
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 123 IYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 123 l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
++.+++..| ..+..+...+|-|+|.|..|..+|+.+.++|. +|+.+|+..
T Consensus 172 lAall~al~----l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 172 LAAIFNSLK----LLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp HHHHHHHHH----TTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred HHHHHHHHH----HhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 888888887 35678999999999999999999999999999 899999974
No 193
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.04 E-value=0.041 Score=45.56 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCE-EEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVK-IIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~-V~~~~r~~~ 177 (189)
.|++|.|+|.|.||...++.++.+|++ |++.+++..
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~ 215 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEG 215 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 489999999999999999999999998 999887653
No 194
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.02 E-value=0.069 Score=45.28 Aligned_cols=66 Identities=23% Similarity=0.312 Sum_probs=52.7
Q ss_pred CCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCC
Q 044056 100 CAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRS 175 (189)
Q Consensus 100 ~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~ 175 (189)
.+|++.|. +. +.+|=-+++.+++..|- .+..+.+.+|.|+|.|..|..+|+.+.+.|. +|+.+|++
T Consensus 159 ~~Ipvf~D-Di-----qGTasV~lAal~~A~~i----~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 159 MNIPVFHD-DQ-----QGTAVVVSAAFLNALKL----TEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CSSCEEEH-HH-----HHHHHHHHHHHHHHHHH----HTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred cCcceecc-cc-----ccHHHHHHHHHHHHHHH----hCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 36899883 33 44555566666666652 4558999999999999999999999999999 79999998
No 195
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=93.98 E-value=0.067 Score=43.08 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEcCC---HHHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISGFG---NIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~G---~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...+.||++.|.|-+ .||+++|+.|..-|++|+..+|+.
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 456899999999986 899999999999999999999874
No 196
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=93.96 E-value=0.065 Score=43.51 Aligned_cols=41 Identities=29% Similarity=0.348 Sum_probs=32.3
Q ss_pred CCCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 137 TGETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 137 ~~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
....+.+++|.|.| .|.||+.+++.|..-|.+|++.+|...
T Consensus 15 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 56 (333)
T 2q1w_A 15 VPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT 56 (333)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred eeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 44567899999998 799999999999989999999998754
No 197
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.95 E-value=0.055 Score=45.22 Aligned_cols=37 Identities=32% Similarity=0.369 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCC-CEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFG-VKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG-~~V~~~~r~~~~ 178 (189)
.|++|.|+|.|.||...++.++.+| .+|++.+++..+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~ 232 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNR 232 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHH
Confidence 5899999999999999999999999 599999986543
No 198
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=93.93 E-value=0.056 Score=42.88 Aligned_cols=44 Identities=27% Similarity=0.460 Sum_probs=35.3
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCCcc
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWASHS 180 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~~ 180 (189)
....+.||++.|.|- |.||+++|+.|..-|++|+..+|......
T Consensus 22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~ 66 (266)
T 3uxy_A 22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA 66 (266)
T ss_dssp ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC
T ss_pred hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 345789999999986 68999999999999999999999765543
No 199
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.93 E-value=0.058 Score=44.64 Aligned_cols=36 Identities=25% Similarity=0.573 Sum_probs=33.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|.|. |.||+.+++.++..|++|++.+++..
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~ 206 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE 206 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChh
Confidence 4899999998 99999999999999999999998643
No 200
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=93.86 E-value=0.05 Score=45.62 Aligned_cols=32 Identities=31% Similarity=0.471 Sum_probs=26.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r 174 (189)
..+|||.|||+||+.+.|.+...+++|.+.+.
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~~~~ivaInd 52 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFERGIDIVAIND 52 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 46899999999999999998766889876653
No 201
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=93.86 E-value=0.075 Score=41.49 Aligned_cols=42 Identities=24% Similarity=0.449 Sum_probs=35.9
Q ss_pred CCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 138 GETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 138 ~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
..++.+|++.|.| .|.||+++|+.|..-|++|+..+|+....
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 52 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP 52 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence 3468899999997 58999999999999999999999876543
No 202
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.84 E-value=0.041 Score=44.91 Aligned_cols=40 Identities=25% Similarity=0.289 Sum_probs=34.1
Q ss_pred CCCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 137 TGETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
....|++++|.|||+|.+|..+|+.|...|. ++..+|...
T Consensus 30 ~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 30 DYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp --CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4678999999999999999999999998886 688888654
No 203
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=93.81 E-value=0.11 Score=43.05 Aligned_cols=42 Identities=31% Similarity=0.410 Sum_probs=37.3
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
....+.||++.|.|- |.||+++|+.|..-|++|+..+|+..+
T Consensus 39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~ 81 (346)
T 3kvo_A 39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81 (346)
T ss_dssp CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 456799999999985 789999999999999999999998664
No 204
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.81 E-value=0.043 Score=44.86 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=33.6
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
-.|++|.|+| .|.||..+++.++.+|++|++.+++..
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 184 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE 184 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3589999999 899999999999999999999998643
No 205
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=93.78 E-value=0.043 Score=44.20 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
.++++.|+|.|..|++++..|...|+ +|..++|+..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ 154 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVK 154 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 57899999999999999999999998 7999999854
No 206
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=93.72 E-value=0.074 Score=44.96 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
..+++|+|+|-|.+|+.+++.++.+|.+|+.+| +.
T Consensus 22 m~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 22 WNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 458999999999999999999999999999999 53
No 207
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=93.63 E-value=0.08 Score=40.99 Aligned_cols=40 Identities=25% Similarity=0.440 Sum_probs=35.6
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 49 (247)
T 3i1j_A 9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEA 49 (247)
T ss_dssp TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHH
Confidence 35689999999986 89999999999999999999998754
No 208
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.58 E-value=0.053 Score=46.85 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+-.+|+|||+|.+|.-+|..+...|.+|+++|.....
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~k 56 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSI 56 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence 3469999999999999999999899999999986543
No 209
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=93.55 E-value=0.046 Score=43.63 Aligned_cols=41 Identities=27% Similarity=0.334 Sum_probs=35.8
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 139 ETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 139 ~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
..+.||++.|.|- |.||+++|+.|..-|++|+..+|+....
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~ 70 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGST 70 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 3688999999985 7899999999999999999999976543
No 210
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.54 E-value=0.092 Score=41.55 Aligned_cols=42 Identities=21% Similarity=0.386 Sum_probs=35.1
Q ss_pred CCCCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 136 PTGETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 136 ~~~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.....+.+|++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 56 (267)
T 1vl8_A 14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLE 56 (267)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 345688999999997 579999999999999999999998743
No 211
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=93.50 E-value=0.068 Score=42.56 Aligned_cols=40 Identities=35% Similarity=0.532 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~ 63 (286)
T 1xu9_A 23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKE 63 (286)
T ss_dssp GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 34588999999987 89999999999999999999998753
No 212
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.49 E-value=0.044 Score=44.69 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=33.1
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|+| .|.||+.+++.++.+|++|++.+++..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 176 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPE 176 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 589999999 899999999999999999999998653
No 213
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=93.46 E-value=0.051 Score=43.40 Aligned_cols=40 Identities=28% Similarity=0.348 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 139 ETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 139 ~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++.||++.|.|- |.||+++|+.|..-|++|+..+|+...
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~ 68 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDA 68 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4789999999985 789999999999999999999997543
No 214
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=93.46 E-value=0.071 Score=41.96 Aligned_cols=42 Identities=21% Similarity=0.476 Sum_probs=35.5
Q ss_pred CCCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
....+.||++.|.| .|.||+++|+.|..-|++|+..+|+...
T Consensus 23 ~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~ 65 (262)
T 3rkr_A 23 HMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK 65 (262)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 34678999999998 5899999999999999999999987543
No 215
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=93.43 E-value=0.07 Score=45.25 Aligned_cols=35 Identities=9% Similarity=0.118 Sum_probs=32.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
--++-|+|.|.+|+++++.++.+|++|..+|+.+.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 35899999999999999999999999999998654
No 216
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=93.42 E-value=0.066 Score=45.10 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=33.4
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHccCC-CEEEEEcCCCC
Q 044056 141 LLGKTVFISG-FGNIGVELAKRLRPFG-VKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG-~G~IG~~vA~~l~afG-~~V~~~~r~~~ 177 (189)
+.+|+|.|.| .|.||+++++.|...| .+|++++|+..
T Consensus 33 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~ 71 (399)
T 3nzo_A 33 VSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISEN 71 (399)
T ss_dssp HHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred hCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcc
Confidence 5689999999 7999999999999999 79999999753
No 217
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.42 E-value=0.083 Score=42.94 Aligned_cols=38 Identities=26% Similarity=0.321 Sum_probs=33.8
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 141 LLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 141 l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+.+++|.|.| .|.||+.+++.|..-|.+|++.+|....
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 61 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTG 61 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 4579999999 6999999999999999999999997653
No 218
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.39 E-value=0.081 Score=43.43 Aligned_cols=42 Identities=24% Similarity=0.268 Sum_probs=34.1
Q ss_pred CCCCCCCEEEEEc-CCHHHHHHHHHHccC-CCEEEEEcCCCCCc
Q 044056 138 GETLLGKTVFISG-FGNIGVELAKRLRPF-GVKIIAAKRSWASH 179 (189)
Q Consensus 138 ~~~l~gktvGIvG-~G~IG~~vA~~l~af-G~~V~~~~r~~~~~ 179 (189)
...+.+++|.|.| .|.||+.+++.|..- |.+|++.+|+....
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 62 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL 62 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh
Confidence 3457789999999 799999999999877 89999999986553
No 219
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=93.38 E-value=0.13 Score=41.32 Aligned_cols=40 Identities=30% Similarity=0.329 Sum_probs=35.5
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 82 (291)
T 3ijr_A 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE 82 (291)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 45789999999985 78999999999999999999988754
No 220
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.37 E-value=0.062 Score=44.41 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=33.0
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|.| .|.||+.+++.++..|++|++.+++..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~ 198 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK 198 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 589999999 799999999999999999999998643
No 221
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.37 E-value=0.055 Score=44.46 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=33.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|+|. |.||+.+++.++.+|++|++.+++..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~ 202 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSED 202 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999999 99999999999999999999998643
No 222
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=93.36 E-value=0.12 Score=40.71 Aligned_cols=43 Identities=21% Similarity=0.332 Sum_probs=33.3
Q ss_pred CCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 136 PTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.....+.+|++.|.|- |.||+++|+.|..-|.+|+..+|+..+
T Consensus 14 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 57 (253)
T 2nm0_A 14 LVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP 57 (253)
T ss_dssp ------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh
Confidence 3456788999999974 799999999999999999999987654
No 223
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=93.36 E-value=0.079 Score=42.16 Aligned_cols=39 Identities=26% Similarity=0.347 Sum_probs=34.3
Q ss_pred CCCCCCCEEEEEcC-CH--HHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISGF-GN--IGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~--IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...+.||++.|.|- |. ||+++|+.|..-|++|+..+|..
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 45788999999996 45 99999999999999999999876
No 224
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.35 E-value=0.062 Score=44.42 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=32.9
Q ss_pred CCCEEEEE-cCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFIS-GFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIv-G~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.|++|.|. |.|.||..+++.++..|++|++.+++..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 203 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTG 203 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 58999999 7899999999999999999999998653
No 225
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=93.31 E-value=0.12 Score=40.94 Aligned_cols=40 Identities=20% Similarity=0.215 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++.+|++.|.| .|.||+++|+.|...|++|+..+|+..
T Consensus 26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 66 (272)
T 1yb1_A 26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKH 66 (272)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHH
Confidence 4568999999997 689999999999999999999998753
No 226
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=93.31 E-value=0.056 Score=42.13 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=24.1
Q ss_pred CEEEEEcCCHHHHHHHHH--HccCCCEEE-EEcCCCCCc
Q 044056 144 KTVFISGFGNIGVELAKR--LRPFGVKII-AAKRSWASH 179 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~--l~afG~~V~-~~~r~~~~~ 179 (189)
.+++|+|.|++|+++|+. ....|+++. ++|..+...
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~ 124 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKI 124 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTT
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHH
Confidence 579999999999999994 446688855 667665543
No 227
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=93.26 E-value=0.11 Score=41.56 Aligned_cols=42 Identities=26% Similarity=0.334 Sum_probs=36.5
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
...++.||++.|.|- |.||+++|+.|..-|++|+..+|+..+
T Consensus 10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~ 52 (291)
T 3rd5_A 10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRK 52 (291)
T ss_dssp GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 345789999999985 789999999999999999999997543
No 228
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.25 E-value=0.046 Score=45.39 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=32.6
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 142 LGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 142 ~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.|++|.|+| .|.||..+++.++.+|++|++.+++.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 198 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD 198 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH
Confidence 589999999 79999999999999999999999864
No 229
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.25 E-value=0.047 Score=44.46 Aligned_cols=35 Identities=14% Similarity=0.305 Sum_probs=32.6
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 142 LGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 142 ~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.|++|.|.| .|.||+.+++.++..|++|++.+++.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~ 175 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA 175 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 589999999 79999999999999999999999864
No 230
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=93.24 E-value=0.086 Score=41.06 Aligned_cols=40 Identities=23% Similarity=0.416 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
..+.+|++.|.| .|.||+++|+.|..-|++|+..+|+..+
T Consensus 10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~ 50 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAAD 50 (265)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTT
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchh
Confidence 457899999997 6799999999999999999999986543
No 231
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=93.21 E-value=0.12 Score=46.43 Aligned_cols=61 Identities=23% Similarity=0.234 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHH--HHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 116 ASCAELSIYLML--GLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 116 ~~vAE~~l~liL--~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
...||.+.-+-| +-.|-++......|++++|.|||+|.+|.++|+.|...|. ++..+|...
T Consensus 297 ~~la~~~~~Lnlklm~wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 297 LKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHHHhhhhhhhhHHHHHhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 567777766644 3345544444457999999999999999999999999998 688888754
No 232
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=93.19 E-value=0.12 Score=40.28 Aligned_cols=42 Identities=17% Similarity=0.270 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCCcc
Q 044056 139 ETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWASHS 180 (189)
Q Consensus 139 ~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~~ 180 (189)
.+-.+|++.|.|- |.||+++|+.|..-|++|+..+|+..+..
T Consensus 18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~ 60 (251)
T 3orf_A 18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA 60 (251)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc
Confidence 3445899999985 78999999999999999999999876543
No 233
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.18 E-value=0.072 Score=43.80 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=32.9
Q ss_pred CCCEEEEEcCC-HHHHHHHHHHccC-CCEEEEEcCCCC
Q 044056 142 LGKTVFISGFG-NIGVELAKRLRPF-GVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G-~IG~~vA~~l~af-G~~V~~~~r~~~ 177 (189)
.|++|.|.|.| .||+.+++.++.. |++|++.+++..
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~ 207 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE 207 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence 58999999999 9999999999998 999999998653
No 234
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=93.13 E-value=0.11 Score=42.09 Aligned_cols=40 Identities=20% Similarity=0.259 Sum_probs=32.1
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.+++|.|.|. |.||+.+++.|..-|.+|++.+|...
T Consensus 22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 62 (343)
T 2b69_A 22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT 62 (343)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 35677899999997 99999999999988999999998643
No 235
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.12 E-value=0.1 Score=43.06 Aligned_cols=38 Identities=21% Similarity=0.166 Sum_probs=33.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCCcc
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWASHS 180 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~~~ 180 (189)
.++|+|+|.|.+|..+|..+..-|. +|..||+.....+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~ 52 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQ 52 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHH
Confidence 4799999999999999999987787 9999999865443
No 236
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=93.11 E-value=0.076 Score=42.32 Aligned_cols=37 Identities=24% Similarity=0.313 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcC---CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 140 TLLGKTVFISGF---GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 140 ~l~gktvGIvG~---G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.+.||++.|.|- |.||+++|+.|..-|++|+..+|+.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 57 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP 57 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence 488999999997 6999999999999999999999875
No 237
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=93.09 E-value=0.13 Score=40.75 Aligned_cols=39 Identities=26% Similarity=0.464 Sum_probs=34.6
Q ss_pred CCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...+.+|++.|.| .|.||+++|+.|..-|++|+..+|+.
T Consensus 27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~ 66 (279)
T 1xg5_A 27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV 66 (279)
T ss_dssp CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCh
Confidence 3468999999996 58999999999999999999999874
No 238
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=93.08 E-value=0.087 Score=41.24 Aligned_cols=40 Identities=20% Similarity=0.225 Sum_probs=35.4
Q ss_pred CCCCCCCCEEEEEcC---CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 137 TGETLLGKTVFISGF---GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 137 ~~~~l~gktvGIvG~---G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
....+.+|++.|.|- |.||+++|+.|..-|++|+..+|+.
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 456889999999996 5899999999999999999998874
No 239
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=92.96 E-value=0.055 Score=43.70 Aligned_cols=42 Identities=24% Similarity=0.260 Sum_probs=36.6
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
...++.||++.|.|- |.||+++|+.|..-|++|+..+|+...
T Consensus 35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~ 77 (293)
T 3rih_A 35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRE 77 (293)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 456789999999976 689999999999999999999987654
No 240
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=92.96 E-value=0.13 Score=42.49 Aligned_cols=40 Identities=25% Similarity=0.427 Sum_probs=35.3
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCC-CEEEEEcCCCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFG-VKIIAAKRSWAS 178 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG-~~V~~~~r~~~~ 178 (189)
..+.+++|.|.| .|.||+.+++.|..-| .+|++.+|....
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~ 69 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSA 69 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTC
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCC
Confidence 357899999999 5999999999999899 999999987654
No 241
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=92.92 E-value=0.068 Score=41.50 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=26.3
Q ss_pred CEEEEEcCCHHHHHHHHH--HccCCCEEE-EEcCCCCC
Q 044056 144 KTVFISGFGNIGVELAKR--LRPFGVKII-AAKRSWAS 178 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~--l~afG~~V~-~~~r~~~~ 178 (189)
++++|+|.|++|+.+++. ... |+++. ++|..+..
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k 117 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEK 117 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTT
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHH
Confidence 689999999999999995 345 88855 56665543
No 242
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=92.92 E-value=0.089 Score=45.53 Aligned_cols=37 Identities=35% Similarity=0.470 Sum_probs=33.1
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r 174 (189)
..-|.||||+|||||.-|.+=|.-|+--|.+|++--|
T Consensus 32 ~~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr 68 (491)
T 3ulk_A 32 ASYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALR 68 (491)
T ss_dssp TGGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hHHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeC
Confidence 4578999999999999999999999999999877655
No 243
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=92.90 E-value=0.13 Score=41.36 Aligned_cols=40 Identities=15% Similarity=0.274 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.||++.|.|. |.||+++|+.|..-|++|+..+|+..
T Consensus 26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~ 66 (301)
T 3tjr_A 26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQP 66 (301)
T ss_dssp CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 34689999999986 78999999999999999999998754
No 244
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=92.89 E-value=0.12 Score=40.80 Aligned_cols=41 Identities=27% Similarity=0.336 Sum_probs=35.6
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 139 ETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 139 ~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
..+.+|++.|.|- |.||+++|+.|..-|++|+..+|+..+.
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 65 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS 65 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 3578999999985 7899999999999999999999986553
No 245
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=92.89 E-value=0.089 Score=43.24 Aligned_cols=40 Identities=25% Similarity=0.357 Sum_probs=34.7
Q ss_pred CCCCCCCEEEEEc-CCHHHHHHHHHHccC-CC-EEEEEcCCCC
Q 044056 138 GETLLGKTVFISG-FGNIGVELAKRLRPF-GV-KIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG-~G~IG~~vA~~l~af-G~-~V~~~~r~~~ 177 (189)
...+.+|+|.|.| .|.||+++++.|... |. +|++++|...
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~ 58 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDEL 58 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHH
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChh
Confidence 3457899999999 699999999999887 98 9999999743
No 246
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.88 E-value=0.074 Score=46.30 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=31.9
Q ss_pred CCEEEEEcCCHHHHH-HHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVE-LAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~-vA~~l~afG~~V~~~~r~~~ 177 (189)
.|+|-|||.|.+|.. +|+.|+..|++|.++|....
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC
Confidence 589999999999996 89999999999999997643
No 247
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=92.88 E-value=0.077 Score=41.63 Aligned_cols=40 Identities=28% Similarity=0.419 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEcCC---HHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 139 ETLLGKTVFISGFG---NIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 139 ~~l~gktvGIvG~G---~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++.||++.|.|-+ .||+++|+.|..-|++|+..+++..+
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~ 58 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQ 58 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSS
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcch
Confidence 36889999999975 89999999999999999999887654
No 248
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.86 E-value=0.11 Score=41.76 Aligned_cols=41 Identities=27% Similarity=0.359 Sum_probs=34.8
Q ss_pred CCCCCCCCEEEEEcCC-HHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 137 TGETLLGKTVFISGFG-NIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G-~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
....|.||++.|-|-+ .||+++|+.|..-|++|+..+|+..
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~ 64 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKD 64 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3456999999999864 6999999999999999999998754
No 249
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.86 E-value=0.11 Score=41.69 Aligned_cols=39 Identities=28% Similarity=0.295 Sum_probs=33.9
Q ss_pred CCCCCCCEEEEEcCC-H--HHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISGFG-N--IGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~G-~--IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...+.||++.|.|-+ . ||+++|+.|..-|++|+..+|+.
T Consensus 26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~ 67 (293)
T 3grk_A 26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD 67 (293)
T ss_dssp -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH
T ss_pred cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 346899999999974 4 99999999999999999998873
No 250
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=92.84 E-value=0.16 Score=44.70 Aligned_cols=40 Identities=25% Similarity=0.347 Sum_probs=36.8
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++.+|+|.|||-|.+|-++|..+...|.+|..+.|++.
T Consensus 173 ~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 173 GKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4567899999999999999999999999999999998875
No 251
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=92.83 E-value=0.16 Score=40.23 Aligned_cols=40 Identities=30% Similarity=0.434 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~ 62 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLP 62 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45689999999986 57999999999999999999998753
No 252
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=92.81 E-value=0.07 Score=42.19 Aligned_cols=41 Identities=27% Similarity=0.381 Sum_probs=32.5
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
..++.||++.|.|- |.||+++|+.|..-|++|+..+|+..+
T Consensus 22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 63 (260)
T 3gem_A 22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHA 63 (260)
T ss_dssp -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 34688999999985 789999999999999999999997643
No 253
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.80 E-value=0.055 Score=44.07 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.2
Q ss_pred EEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 145 TVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 145 tvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+|.|+|. |.||...++.++.+|++|++.+++..+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~ 186 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE 186 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 7999998 999999999999999999999987544
No 254
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.78 E-value=0.079 Score=43.68 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=31.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 144 KTVFISGF-GNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 144 ktvGIvG~-G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
++|.|.|. |.||+.+++.++..|+ +|++.+++.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~ 196 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH 196 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH
Confidence 99999998 9999999999999999 999999864
No 255
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=92.78 E-value=0.12 Score=41.28 Aligned_cols=41 Identities=24% Similarity=0.208 Sum_probs=32.7
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...++.+|++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 63 (283)
T 3v8b_A 22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRT 63 (283)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 345788999999985 78999999999999999999998753
No 256
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=92.76 E-value=0.082 Score=42.10 Aligned_cols=46 Identities=17% Similarity=0.164 Sum_probs=31.5
Q ss_pred cCCCCCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 132 KHIVPTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 132 ~~~~~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
++.......+.+|++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 17 ~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 63 (272)
T 4dyv_A 17 NLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLD 63 (272)
T ss_dssp -----------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred eeehhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 33333455688999999985 78999999999999999999998743
No 257
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=92.72 E-value=0.16 Score=40.89 Aligned_cols=40 Identities=30% Similarity=0.301 Sum_probs=35.4
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
....+.||++.|.|- |.||+++|+.|..-|++|+..++..
T Consensus 22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~ 62 (299)
T 3t7c_A 22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCK 62 (299)
T ss_dssp CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeccc
Confidence 345789999999985 6899999999999999999999874
No 258
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=92.70 E-value=0.11 Score=40.35 Aligned_cols=42 Identities=31% Similarity=0.418 Sum_probs=36.4
Q ss_pred CCCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
...++.+|++.|.| .|.||+++|+.|..-|++|+..+|+...
T Consensus 8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~ 50 (249)
T 3f9i_A 8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEK 50 (249)
T ss_dssp -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 45688999999998 5799999999999999999999987643
No 259
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=92.69 E-value=0.15 Score=40.60 Aligned_cols=39 Identities=23% Similarity=0.367 Sum_probs=34.5
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++.+|++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~ 64 (276)
T 2b4q_A 25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE 64 (276)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3588999999985 89999999999999999999998753
No 260
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=92.69 E-value=0.1 Score=42.51 Aligned_cols=38 Identities=24% Similarity=0.298 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
++.+++|.|.|. |.||+.+++.|..-|.+|++.+|...
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 62 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFAT 62 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 356799999997 99999999999988999999998754
No 261
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=92.64 E-value=0.16 Score=40.48 Aligned_cols=40 Identities=25% Similarity=0.452 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.||++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~ 61 (302)
T 1w6u_A 21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD 61 (302)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4468999999997 589999999999999999999998753
No 262
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=92.63 E-value=0.12 Score=40.98 Aligned_cols=40 Identities=23% Similarity=0.363 Sum_probs=35.6
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~ 65 (281)
T 3ppi_A 25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAE 65 (281)
T ss_dssp CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChH
Confidence 45789999999986 78999999999999999999998754
No 263
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=92.59 E-value=0.16 Score=40.52 Aligned_cols=40 Identities=18% Similarity=0.197 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~ 62 (277)
T 4dqx_A 22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNED 62 (277)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45788999999975 78999999999999999999998753
No 264
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.58 E-value=0.072 Score=43.50 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=32.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.|++|.|.|. |.||+.+++.++..|++|++.+++.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~ 180 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE 180 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5899999995 9999999999999999999999875
No 265
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.57 E-value=0.099 Score=43.48 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=31.1
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcC
Q 044056 141 LLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 141 l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r 174 (189)
-.|++|.|+| .|.||+.+++.++.+|++|++.++
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~ 216 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS 216 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 3589999999 799999999999999999998874
No 266
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=92.57 E-value=0.17 Score=41.06 Aligned_cols=40 Identities=33% Similarity=0.360 Sum_probs=34.4
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.||++.|.|- |.||+++|+.|..-|++|+..++...
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~ 81 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQ 81 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccc
Confidence 45688999999975 78999999999999999999988643
No 267
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.50 E-value=0.064 Score=43.71 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=31.2
Q ss_pred EEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 145 TVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 145 tvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+|.|+|. |.||...++.++.+|++|++.+++...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~ 187 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA 187 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 7999998 999999999999999999999987544
No 268
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=92.47 E-value=0.17 Score=39.68 Aligned_cols=40 Identities=30% Similarity=0.414 Sum_probs=34.8
Q ss_pred CCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.+|++.|.| .|.||+++|+.|..-|++|+..+|...
T Consensus 11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~ 51 (278)
T 2bgk_A 11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADD 51 (278)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChh
Confidence 3467899999997 589999999999999999999988743
No 269
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=92.47 E-value=0.13 Score=45.97 Aligned_cols=60 Identities=23% Similarity=0.319 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHhcC--CCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCC
Q 044056 116 ASCAELSIYLMLGLLRKH--IVPTGETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRS 175 (189)
Q Consensus 116 ~~vAE~~l~liL~~~R~~--~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~ 175 (189)
...|++..-+=|-+.|-. +......|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 298 ~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 298 LKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred HHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 456777755555444332 2233378999999999999999999999999998 68888765
No 270
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=92.41 E-value=0.088 Score=45.69 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=31.9
Q ss_pred CCEEEEEcCCHHHHH-HHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVE-LAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~-vA~~l~afG~~V~~~~r~~~ 177 (189)
-|+|.|||+|.+|.. +|+.|+..|.+|.++|....
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 54 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 54 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCC
Confidence 478999999999997 99999999999999998653
No 271
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=92.40 E-value=0.17 Score=43.99 Aligned_cols=37 Identities=30% Similarity=0.324 Sum_probs=33.6
Q ss_pred CCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 143 GKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 143 gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
+++|.|.| .|.||+.+++.|..-|.+|++.+|+..+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~ 184 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP 184 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc
Confidence 68999999 79999999999998899999999987654
No 272
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=92.40 E-value=0.055 Score=47.48 Aligned_cols=39 Identities=33% Similarity=0.507 Sum_probs=29.8
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+.||++.|+|.|.+|+++|..|...|++|+.++|+..
T Consensus 360 ~~l~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~ 398 (523)
T 2o7s_A 360 SPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYE 398 (523)
T ss_dssp ------CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHH
T ss_pred cccCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 357899999999999999999999999999999998743
No 273
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=92.38 E-value=0.2 Score=39.88 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=34.4
Q ss_pred CCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 136 PTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
.....+.+|++.|.|- |.||+++|+.|..-|++|+..+++
T Consensus 22 ~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 62 (280)
T 4da9_A 22 SMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIG 62 (280)
T ss_dssp -CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3456789999999985 789999999999999999999864
No 274
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=92.37 E-value=0.15 Score=39.84 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=33.4
Q ss_pred CCCCCCCCCEEEEEc-CCHHHHHHHHHHccCC---CEEEEEcCCCCC
Q 044056 136 PTGETLLGKTVFISG-FGNIGVELAKRLRPFG---VKIIAAKRSWAS 178 (189)
Q Consensus 136 ~~~~~l~gktvGIvG-~G~IG~~vA~~l~afG---~~V~~~~r~~~~ 178 (189)
.....+.+|++.|.| .|.||+++|+.|...| ++|+..+|+...
T Consensus 14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~ 60 (267)
T 1sny_A 14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ 60 (267)
T ss_dssp ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTS
T ss_pred ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhh
Confidence 345678899999996 5899999999999999 999999997654
No 275
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=92.36 E-value=0.13 Score=42.23 Aligned_cols=37 Identities=16% Similarity=0.044 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHcc-CC-CEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRP-FG-VKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~a-fG-~~V~~~~r~~~~ 178 (189)
..+++||||+|.+|+..++.+.. ++ -+|..|||++..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~ 162 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKA 162 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHH
Confidence 56899999999999999998875 44 479999998543
No 276
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=92.35 E-value=0.094 Score=41.92 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=31.0
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 68 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPD 68 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 35688999999985 78999999999999999999998754
No 277
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=92.33 E-value=0.096 Score=43.24 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=32.6
Q ss_pred CC-CEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LG-KTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~g-ktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.| .+|.|+|. |.||...++.++.+|++|++..++.++
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 47 99999998 999999999999999999988765543
No 278
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=92.31 E-value=0.17 Score=40.04 Aligned_cols=39 Identities=23% Similarity=0.427 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+.||++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 56 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEK 56 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999998 489999999999999999999998753
No 279
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=92.29 E-value=0.14 Score=40.55 Aligned_cols=40 Identities=28% Similarity=0.409 Sum_probs=32.7
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.+|++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 51 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE 51 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 34578999999986 78999999999999999999998753
No 280
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.25 E-value=0.13 Score=42.29 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=30.5
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCC
Q 044056 142 LGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 142 ~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
.|++|.|+| .|.||..+++.++.+|++|++. ++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~ 183 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-AR 183 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC
Confidence 589999999 8999999999999999999988 44
No 281
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.25 E-value=0.28 Score=38.83 Aligned_cols=39 Identities=33% Similarity=0.412 Sum_probs=34.0
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...+.||++.|.|- |.||+++|+.|..-|++|+..+|..
T Consensus 10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~ 49 (280)
T 3pgx_A 10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICA 49 (280)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccc
Confidence 35689999999985 7899999999999999999999853
No 282
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=92.24 E-value=0.22 Score=39.51 Aligned_cols=39 Identities=26% Similarity=0.193 Sum_probs=34.3
Q ss_pred CCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...+.+|++.|.| .|.||+++|+.|..-|++|+..+|+.
T Consensus 39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 78 (285)
T 2c07_A 39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ 78 (285)
T ss_dssp CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 4567899999996 58999999999999999999998764
No 283
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=92.22 E-value=0.089 Score=41.55 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=34.4
Q ss_pred CCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 140 TLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 140 ~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++.+|++.|.| .|.||+++|+.|..-|++|+..+|+...
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~ 70 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPA 70 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 47899999997 6799999999999899999999987654
No 284
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.22 E-value=0.12 Score=42.41 Aligned_cols=38 Identities=24% Similarity=0.284 Sum_probs=33.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccC-CCEEEEEcCCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPF-GVKIIAAKRSWAS 178 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~af-G~~V~~~~r~~~~ 178 (189)
-.|.+|.|+|.|.+|...++.++.+ |.+|++.+++..+
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~ 208 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDR 208 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence 3489999999999999999999988 7899999887543
No 285
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=92.21 E-value=0.099 Score=37.03 Aligned_cols=44 Identities=20% Similarity=0.192 Sum_probs=39.0
Q ss_pred CEEEEEcC----CHHHHHHHHHHccCCCEEEEEcCCCCCcccccccCC
Q 044056 144 KTVFISGF----GNIGVELAKRLRPFGVKIIAAKRSWASHSQVCCQSS 187 (189)
Q Consensus 144 ktvGIvG~----G~IG~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~ 187 (189)
++|.|||. ++.|..+.+.|+.+|++|+-+++...+..+..|+.|
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~s 52 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINE 52 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCS
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCC
Confidence 78999998 579999999999999999999999888888877765
No 286
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.20 E-value=0.1 Score=44.52 Aligned_cols=37 Identities=24% Similarity=0.190 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 140 TLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 140 ~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
--.|++|.|.|. |.||..+++.++..|++|++.+++.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~ 255 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA 255 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 346899999998 9999999999999999999988754
No 287
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=92.14 E-value=0.064 Score=45.11 Aligned_cols=35 Identities=14% Similarity=0.045 Sum_probs=31.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
--++-|+|.|.+++++++.++.+|++|..+|+++.
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~ 233 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPN 233 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcc
Confidence 35799999999999999999999999999998754
No 288
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=92.14 E-value=0.15 Score=42.18 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=29.2
Q ss_pred CCEEEEEcCCHHHHHHHHHHc-c-CCCEEE-EEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLR-P-FGVKII-AAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~-a-fG~~V~-~~~r~~~~ 178 (189)
-.+|||||+|.||+..++.+. . -++++. .+|+.+..
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~ 61 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGR 61 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTH
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHH
Confidence 358999999999999999887 5 478876 58887654
No 289
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=92.14 E-value=0.12 Score=43.09 Aligned_cols=40 Identities=25% Similarity=0.372 Sum_probs=34.8
Q ss_pred CCCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 137 TGETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 137 ~~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
....|.+++|.|+|+|.+|.++|+.|...|. ++..+|...
T Consensus 30 ~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 30 AQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp HHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 3457889999999999999999999998888 788998654
No 290
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.12 E-value=0.13 Score=45.27 Aligned_cols=36 Identities=31% Similarity=0.354 Sum_probs=33.1
Q ss_pred CEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 144 KTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
+.+.|+|+|++|+.+|+.|...|.+|...|..+...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~ 384 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPV 384 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHH
Confidence 789999999999999999999999999999877653
No 291
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=92.03 E-value=0.13 Score=40.58 Aligned_cols=40 Identities=25% Similarity=0.438 Sum_probs=35.1
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 55 (266)
T 4egf_A 15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVS 55 (266)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 34689999999985 78999999999999999999998753
No 292
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.02 E-value=0.081 Score=42.90 Aligned_cols=35 Identities=23% Similarity=0.450 Sum_probs=31.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
|+ |.|.|. |.||...++.++.+|++|++.+++..+
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~ 183 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGREST 183 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 45 999998 999999999999999999999987544
No 293
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=92.01 E-value=0.28 Score=40.48 Aligned_cols=39 Identities=26% Similarity=0.291 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 140 TLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 140 ~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
...+++|.|.|. |.||+.+++.|..-|.+|++.+|...+
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 65 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE 65 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCS
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCcc
Confidence 346789999997 999999999999889999999997654
No 294
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=92.01 E-value=0.11 Score=41.40 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=33.4
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++.||++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~ 64 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGD 64 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 468999999997 568999999999999999999998743
No 295
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=91.98 E-value=0.15 Score=39.87 Aligned_cols=39 Identities=23% Similarity=0.447 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+.||++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 49 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQE 49 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457899999997 589999999999999999999998754
No 296
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=91.97 E-value=0.24 Score=42.99 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=58.9
Q ss_pred CCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCC---EEEEEcCCC
Q 044056 100 CAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGV---KIIAAKRSW 176 (189)
Q Consensus 100 ~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~---~V~~~~r~~ 176 (189)
..|++.|.- . +-+|=-+++.+|+.+|- .+..|.+.+|.+.|.|.-|-.+|+.+...|+ +|+.+|+.+
T Consensus 186 ~~ipvFnDD-~-----qGTA~V~lAgllnAlki----~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~G 255 (487)
T 3nv9_A 186 CDIPVWHDD-Q-----QGTASVTLAGLLNALKL----VKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKG 255 (487)
T ss_dssp CSSCEEETT-T-----HHHHHHHHHHHHHHHHH----HTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTE
T ss_pred ccCCccccc-c-----chHHHHHHHHHHHHHHH----hCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccc
Confidence 379999963 2 66888999999999985 6889999999999999999999999999999 799999864
No 297
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=91.97 E-value=0.2 Score=39.78 Aligned_cols=38 Identities=26% Similarity=0.415 Sum_probs=33.8
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
..++.||++.|.|- |.||+++|+.|..-|++|+..+|.
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH
Confidence 35789999999985 689999999999999999999865
No 298
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=91.94 E-value=0.19 Score=40.33 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.++.||++.|.| .|.||+++|+.|..-|++|+..+|+.
T Consensus 30 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 68 (291)
T 3cxt_A 30 FSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQ 68 (291)
T ss_dssp GCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 368899999998 68999999999999999999999874
No 299
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.94 E-value=0.11 Score=43.30 Aligned_cols=39 Identities=28% Similarity=0.393 Sum_probs=34.2
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
...|++++|.|+|+|.+|.++|+.|...|. ++..+|+..
T Consensus 113 q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 113 QDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred HHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 456889999999999999999999998887 688888754
No 300
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=91.94 E-value=0.12 Score=42.24 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=30.9
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHccCC-CEEEEEcCCCCC
Q 044056 139 ETLLGKTVFISGF-GNIGVELAKRLRPFG-VKIIAAKRSWAS 178 (189)
Q Consensus 139 ~~l~gktvGIvG~-G~IG~~vA~~l~afG-~~V~~~~r~~~~ 178 (189)
..+.+++|.|.|. |.||+.+++.|..-| .+|++.+|....
T Consensus 42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~ 83 (357)
T 2x6t_A 42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG 83 (357)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSG
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCc
Confidence 3467899999997 999999999999889 999999987654
No 301
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=91.93 E-value=0.17 Score=40.11 Aligned_cols=41 Identities=20% Similarity=0.279 Sum_probs=35.6
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...++.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~ 62 (266)
T 3grp_A 21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRED 62 (266)
T ss_dssp CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 345789999999985 78999999999999999999998754
No 302
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=91.90 E-value=0.14 Score=40.37 Aligned_cols=40 Identities=38% Similarity=0.546 Sum_probs=34.7
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...++.||++.|.|- |.||+++|+.|..-|++|+..+|+.
T Consensus 23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (271)
T 4iin_A 23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSN 63 (271)
T ss_dssp -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 345788999999985 7999999999999999999999854
No 303
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=91.89 E-value=0.082 Score=45.65 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=31.9
Q ss_pred CCEEEEEcCCHHHHH-HHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVE-LAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~-vA~~l~afG~~V~~~~r~~~ 177 (189)
-++|.|||+|.+|.. +|+.|+..|.+|.++|....
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~ 53 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADG 53 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCS
T ss_pred CCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCC
Confidence 478999999999997 99999999999999998653
No 304
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=91.87 E-value=0.2 Score=39.72 Aligned_cols=38 Identities=26% Similarity=0.472 Sum_probs=33.9
Q ss_pred CCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
++.+|++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 57 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEE 57 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 58899999997 579999999999999999999998753
No 305
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=91.86 E-value=0.21 Score=39.83 Aligned_cols=39 Identities=26% Similarity=0.383 Sum_probs=33.5
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
..++.+|++.|.|- |.||+++|+.|..-|++|+..+|+.
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~ 59 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA 59 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45788999999985 7899999999999999999999843
No 306
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=91.85 E-value=0.12 Score=40.95 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=35.1
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++.||++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~ 61 (271)
T 4ibo_A 21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPS 61 (271)
T ss_dssp GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35789999999985 78999999999999999999998653
No 307
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.80 E-value=0.13 Score=41.74 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=30.8
Q ss_pred CCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcC
Q 044056 141 LLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 141 l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r 174 (189)
-.|.+|.|+| .|.||...++.++.+|++|++..+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~ 185 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS 185 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec
Confidence 3589999997 999999999999999999998864
No 308
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=91.79 E-value=0.15 Score=40.41 Aligned_cols=40 Identities=25% Similarity=0.314 Sum_probs=35.0
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.+|++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 63 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA 63 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35689999999975 78999999999999999999998753
No 309
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=91.78 E-value=0.23 Score=43.63 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++.+|+|+|||-|.+|-++|..+...+.+|..+.|++.
T Consensus 181 ~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 181 VDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred cccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 567899999999999999999999999999999998875
No 310
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=91.67 E-value=0.1 Score=42.67 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=30.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+.+.|+|+|++|+.+|+.|...|. |...|+.+..
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~ 149 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVR 149 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhh
Confidence 5689999999999999999999999 9999987654
No 311
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.64 E-value=0.13 Score=44.13 Aligned_cols=36 Identities=25% Similarity=0.198 Sum_probs=32.6
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 141 LLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 141 l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
-.|++|.|+|. |.||...++.++++|++|++.+++.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~ 263 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSP 263 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH
Confidence 45899999998 9999999999999999999988654
No 312
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=91.60 E-value=0.25 Score=39.38 Aligned_cols=40 Identities=25% Similarity=0.449 Sum_probs=35.1
Q ss_pred CCCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 137 TGETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 137 ~~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
....+.+|++.|.| .|.||+++|+.|..-|++|+..+|+.
T Consensus 12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~ 52 (303)
T 1yxm_A 12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKL 52 (303)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34578899999997 58999999999999999999999874
No 313
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=91.57 E-value=0.17 Score=41.57 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHcc-CCC-EEEEEcCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRP-FGV-KIIAAKRS 175 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~a-fG~-~V~~~~r~ 175 (189)
..++++|||.|.+|+..++.+.. ++. +|..|||+
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 155 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY 155 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc
Confidence 46899999999999999998874 554 79999999
No 314
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=91.57 E-value=0.14 Score=41.43 Aligned_cols=39 Identities=26% Similarity=0.245 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCC-------CEEEEEcCCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFG-------VKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG-------~~V~~~~r~~~ 177 (189)
..+.+++|.|.| .|.||+.+++.|..-| .+|++.+|...
T Consensus 10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~ 56 (342)
T 2hrz_A 10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQP 56 (342)
T ss_dssp SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCC
T ss_pred CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCC
Confidence 357789999999 7999999999999889 89999998754
No 315
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=91.43 E-value=0.09 Score=40.93 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=27.9
Q ss_pred CCEEEEEcCCHHHHHHHHHH--ccCCCEEE-EEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRL--RPFGVKII-AAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l--~afG~~V~-~~~r~~~ 177 (189)
.++++|+|.|++|+++++.+ +..|+++. ++|..+.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~ 121 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSN 121 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTS
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCch
Confidence 46899999999999999983 46789865 5676655
No 316
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=91.33 E-value=0.2 Score=43.84 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCCHHHHH-HHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVE-LAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~-vA~~l~afG~~V~~~~r~~~ 177 (189)
...++|-+||.|.+|.. +|+.|+..|++|.++|....
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~ 54 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY 54 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC
Confidence 45799999999999996 79999999999999998643
No 317
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.29 E-value=0.3 Score=39.12 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=34.5
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...+.||++.|.|- |.||+++|+.|..-|++|+..++..
T Consensus 44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~ 83 (294)
T 3r3s_A 44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPA 83 (294)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 35689999999985 7899999999999999999998863
No 318
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=91.27 E-value=0.14 Score=42.35 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=27.6
Q ss_pred CCEEEEEcCCHHHH-HHHHHHccC-CCEEE-EEcCCC
Q 044056 143 GKTVFISGFGNIGV-ELAKRLRPF-GVKII-AAKRSW 176 (189)
Q Consensus 143 gktvGIvG~G~IG~-~vA~~l~af-G~~V~-~~~r~~ 176 (189)
-.+|||||+|.||+ ..++.++.. +++|. .+|+.+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~ 63 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRW 63 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSH
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCH
Confidence 36899999999999 788888766 78876 667764
No 319
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=91.24 E-value=0.24 Score=40.76 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=31.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 144 KTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 144 ktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++|.|.|. |.||+.+++.|..-|.+|++.+|....
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~ 64 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN 64 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence 78999996 999999999999899999999987643
No 320
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.15 E-value=0.28 Score=38.88 Aligned_cols=38 Identities=34% Similarity=0.427 Sum_probs=33.2
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 139 ETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 139 ~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
..+.||++.|.|- |.||+++|+.|..-|++|+..++..
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~ 65 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA 65 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999999985 6899999999999999999886543
No 321
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=91.11 E-value=0.28 Score=40.71 Aligned_cols=37 Identities=24% Similarity=0.239 Sum_probs=28.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+-+.++|+|+|.|.+|+.+|+.|.. ..+|..+|++.+
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~ 49 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNE 49 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHH
T ss_pred cCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHH
Confidence 3445689999999999999999976 468888887654
No 322
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=91.11 E-value=0.17 Score=44.58 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=36.8
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++.+|+|.|||-|.+|-++|..+...+.+|..+.|++.
T Consensus 186 ~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 186 GVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 5677899999999999999999999999999999998875
No 323
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=91.10 E-value=0.2 Score=40.56 Aligned_cols=37 Identities=19% Similarity=0.145 Sum_probs=31.0
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHccCC--CEEEEEcCCC
Q 044056 140 TLLGKTVFISGF-GNIGVELAKRLRPFG--VKIIAAKRSW 176 (189)
Q Consensus 140 ~l~gktvGIvG~-G~IG~~vA~~l~afG--~~V~~~~r~~ 176 (189)
...+++|.|.|. |.||+.+++.|..-| .+|++.++..
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~ 60 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT 60 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc
Confidence 467899999997 999999999998777 8999998875
No 324
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=91.05 E-value=0.11 Score=42.74 Aligned_cols=36 Identities=14% Similarity=0.132 Sum_probs=31.7
Q ss_pred CCEEEEE-cCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFIS-GFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIv-G~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+++|.|. |.|.||...++.++.+|++|++.+++..+
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~ 201 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQ 201 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 4788776 99999999999999999999999987554
No 325
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=91.04 E-value=0.19 Score=35.47 Aligned_cols=31 Identities=39% Similarity=0.449 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHcc-CCCEEEEE
Q 044056 142 LGKTVFISGFGNIGVELAKRLRP-FGVKIIAA 172 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~a-fG~~V~~~ 172 (189)
..+++.|+|.|..|+.+++.++. -|++|.++
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~ 34 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAF 34 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEE
Confidence 35789999999999999999974 38998776
No 326
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=91.03 E-value=0.1 Score=43.58 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=33.1
Q ss_pred CCCCEEEEE--cCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFIS--GFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIv--G~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
-.|.+|.|+ |.|.+|...++.++.+|++|++.+++..
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~ 207 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQE 207 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 458899999 8999999999999999999999987643
No 327
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=90.97 E-value=0.21 Score=40.91 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=27.1
Q ss_pred CCEEEEEcCCHHHH-HHHHHHccC-CCEEE-EEcCCCC
Q 044056 143 GKTVFISGFGNIGV-ELAKRLRPF-GVKII-AAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~-~vA~~l~af-G~~V~-~~~r~~~ 177 (189)
-.+|||||+|.||+ ..++.++.. +++|. .+|+...
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~ 62 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT 62 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh
Confidence 35899999999999 688888765 78865 4666654
No 328
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=90.97 E-value=0.24 Score=39.39 Aligned_cols=40 Identities=23% Similarity=0.423 Sum_probs=30.9
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..-+.+|++.|.|- |.||+++|+.|..-|++|+..+|+..
T Consensus 19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 59 (279)
T 3sju_A 19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAK 59 (279)
T ss_dssp ------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 34567999999985 78999999999999999999998754
No 329
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.90 E-value=0.55 Score=41.19 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+.....+.|+|+|+.|+.+|+.|...|.+|+..|..+..
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~ 162 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQ 162 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHH
T ss_pred cccCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHH
Confidence 455678999999999999999999999999999987543
No 330
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=90.90 E-value=0.19 Score=39.26 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=33.0
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
..+.+|++.|.| .|.||+++++.|..-|++|+..+|.
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~ 54 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS 54 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 468899999997 5899999999999999999999883
No 331
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=90.89 E-value=0.28 Score=39.40 Aligned_cols=39 Identities=23% Similarity=0.322 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 140 TLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 140 ~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.-.+++|.|.|- |.||+.+++.|..-|.+|++.+|...+
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 50 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSS 50 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 345789999975 999999999999889999999997654
No 332
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=90.84 E-value=0.14 Score=44.05 Aligned_cols=54 Identities=20% Similarity=0.303 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHccCCC---EEEEEc----CC
Q 044056 118 CAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRPFGV---KIIAAK----RS 175 (189)
Q Consensus 118 vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~afG~---~V~~~~----r~ 175 (189)
++-...+.++...|. .+..+.++++.|+|.|..|+++++.|...|+ +|+.+| |+
T Consensus 165 tgntd~aG~~~AL~~----~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 165 TAAVVLAGLLNALKV----VGKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKP 225 (439)
T ss_dssp HHHHHHHHHHHHHHH----HTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEE
T ss_pred EeehHHHHHHHHHHH----hCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCc
Confidence 344445555555553 3567889999999999999999999999998 799999 76
No 333
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=90.83 E-value=0.23 Score=40.32 Aligned_cols=39 Identities=21% Similarity=0.366 Sum_probs=34.2
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
....+.||++.|.|- |.||+++|+.|..-|++|+..+|.
T Consensus 21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 345789999999985 789999999999999999999886
No 334
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=90.81 E-value=0.21 Score=39.00 Aligned_cols=39 Identities=28% Similarity=0.390 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+.+|++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~ 49 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEY 49 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457899999996 589999999999999999999998754
No 335
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=90.80 E-value=0.17 Score=41.69 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=30.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
.|.+|.|+|. |.||...++.++.+|++|++..++
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~ 201 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRD 201 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecC
Confidence 5899999998 999999999999999998877654
No 336
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.71 E-value=0.26 Score=45.26 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=31.9
Q ss_pred CEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
++|||||.|.+|..+|..+..-|++|+.+|++..
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 7999999999999999999999999999998753
No 337
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=90.69 E-value=0.22 Score=39.38 Aligned_cols=37 Identities=24% Similarity=0.340 Sum_probs=33.0
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 139 ETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 139 ~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
..+.||++.|.|- |.||+++|+.|..-|++|+..+++
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~ 61 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS 61 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4688999999985 789999999999999999988774
No 338
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=90.66 E-value=0.16 Score=40.43 Aligned_cols=40 Identities=18% Similarity=0.343 Sum_probs=32.2
Q ss_pred CCCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 137 TGETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 137 ~~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...++.||++.|.| .|.||+++|+.|..-|++|+..+|+.
T Consensus 17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 57 (288)
T 2x9g_A 17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS 57 (288)
T ss_dssp -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 34568899999987 57999999999999999999999875
No 339
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.61 E-value=0.3 Score=38.48 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=33.7
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
....+.||++.|.|- |.||+++|+.|..-|++|+..+++
T Consensus 12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~ 51 (270)
T 3is3_A 12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN 51 (270)
T ss_dssp CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 345789999999985 589999999999999999987654
No 340
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=90.56 E-value=0.41 Score=38.29 Aligned_cols=37 Identities=27% Similarity=0.324 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+++|.|+|-|.+|-++|..|..+|.+|..+.+...
T Consensus 157 ~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 157 FRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred cCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 4689999999999999999999999999999988754
No 341
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.52 E-value=0.25 Score=40.91 Aligned_cols=36 Identities=31% Similarity=0.310 Sum_probs=32.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++++.|||-|.+|-++|..+..+|.+|..+.+....
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 589999999999999999999999999999887543
No 342
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.44 E-value=0.27 Score=40.80 Aligned_cols=33 Identities=21% Similarity=0.019 Sum_probs=30.7
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEc
Q 044056 141 LLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAK 173 (189)
Q Consensus 141 l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~ 173 (189)
-.|++|.|+|. |.||...++.++.+|++|++..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 57899999999 8999999999999999999875
No 343
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=90.29 E-value=0.33 Score=39.80 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=31.4
Q ss_pred CEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 144 KTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 144 ktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++|.|.| .|.||+.+++.|..-|.+|++.+|....
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 60 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSS 60 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccc
Confidence 6899999 6999999999999899999999987543
No 344
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.25 E-value=0.33 Score=39.43 Aligned_cols=39 Identities=15% Similarity=0.132 Sum_probs=33.0
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+.+++|.|||-|.+|-++|..|..+|.+|..+.+...
T Consensus 162 ~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 162 DNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp GGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred hhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 345789999999999999999999999999999988653
No 345
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=90.23 E-value=0.26 Score=39.11 Aligned_cols=39 Identities=31% Similarity=0.407 Sum_probs=33.9
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+.||++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 64 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST 64 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 457899998887 679999999999999999999988753
No 346
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.11 E-value=0.28 Score=40.66 Aligned_cols=36 Identities=8% Similarity=0.016 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCC--EEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGV--KIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~--~V~~~~r~~~ 177 (189)
..++|+|+|.|.+|..+|..+..-|+ +|..+|....
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~ 57 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMED 57 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHH
Confidence 56899999999999999999987776 8999998543
No 347
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.10 E-value=0.45 Score=38.10 Aligned_cols=39 Identities=28% Similarity=0.297 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++.+++|.|||-|.+|-++|..+..+|.+|..+.+...
T Consensus 148 ~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 148 AEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 345789999999999999999999999999999988754
No 348
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.09 E-value=0.36 Score=39.33 Aligned_cols=37 Identities=27% Similarity=0.313 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHc-cCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLR-PFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~-afG~~V~~~~r~~~ 177 (189)
-.|.+|.|+|.|.+|...++.++ ..|.+|++.+++..
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~ 199 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQD 199 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHH
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHH
Confidence 35899999999999999999998 66899999998754
No 349
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.01 E-value=0.32 Score=40.53 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHc-cCC-CEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLR-PFG-VKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~-afG-~~V~~~~r~~~ 177 (189)
..+++||||+|.+|+..++.+. .++ -+|..|||+..
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~ 165 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPL 165 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHH
Confidence 5789999999999999988764 455 47999999854
No 350
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=90.00 E-value=0.39 Score=40.26 Aligned_cols=37 Identities=30% Similarity=0.331 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+++|.|||-|.||-++|..++.+|.+|..+.+....
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 3799999999999999999999999999999887654
No 351
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=89.96 E-value=0.34 Score=40.94 Aligned_cols=36 Identities=25% Similarity=0.488 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++|+|+|-|.+|+.+++.++..|.+|+.++..+.
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYAN 53 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 357999999999999999999999999999987653
No 352
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=89.96 E-value=0.34 Score=41.65 Aligned_cols=42 Identities=24% Similarity=0.262 Sum_probs=36.1
Q ss_pred CCCCCCCCEEEEEc-CCHHHHHHHHHHccC---CCEEEEEcCCCCC
Q 044056 137 TGETLLGKTVFISG-FGNIGVELAKRLRPF---GVKIIAAKRSWAS 178 (189)
Q Consensus 137 ~~~~l~gktvGIvG-~G~IG~~vA~~l~af---G~~V~~~~r~~~~ 178 (189)
......+++|.|.| .|.||+++++.|... |.+|++.+|+...
T Consensus 67 ~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~ 112 (478)
T 4dqv_A 67 PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD 112 (478)
T ss_dssp CCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred CCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence 34567899999999 599999999999877 8999999998653
No 353
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=89.93 E-value=0.52 Score=37.94 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=33.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+++|.|||-|.+|-++|..+..+|.+|..+.+...
T Consensus 153 ~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 153 FRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp GTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 4589999999999999999999999999999987653
No 354
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.63 E-value=0.32 Score=41.92 Aligned_cols=40 Identities=25% Similarity=0.270 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEEcCC----------HHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGFG----------NIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~G----------~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+..+.|++|+|+|+- .-...+++.|...|++|.+|||...
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~ 366 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGV 366 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCH
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCC
Confidence 557899999999997 6789999999999999999999874
No 355
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.56 E-value=0.45 Score=40.28 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCE-EEEEcCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVK-IIAAKRSW 176 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~-V~~~~r~~ 176 (189)
....+|+|.|||-|.+|-++|..|..+|.+ |....|..
T Consensus 208 ~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 208 ELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp GGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 345799999999999999999999999999 98888764
No 356
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=89.56 E-value=0.51 Score=37.85 Aligned_cols=41 Identities=29% Similarity=0.405 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWAS 178 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~~ 178 (189)
+.++.++++.|+|.|..+++++--|...|+ +|..++|+..+
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~r 161 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTAR 161 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHH
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHH
Confidence 567889999999999999999999998997 68899987543
No 357
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.51 E-value=0.28 Score=40.65 Aligned_cols=36 Identities=19% Similarity=0.280 Sum_probs=32.7
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHcc-CCCEEEEEcCCCC
Q 044056 142 LGKTVFISG-FGNIGVELAKRLRP-FGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG-~G~IG~~vA~~l~a-fG~~V~~~~r~~~ 177 (189)
.|++|.|+| .|.||...++.++. .|.+|++.+++..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~ 208 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPE 208 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 689999999 99999999999998 5999999998653
No 358
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=89.50 E-value=0.51 Score=37.33 Aligned_cols=37 Identities=27% Similarity=0.183 Sum_probs=33.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+++|.|||-|.+|-++|..+..+|.+|..+.+...
T Consensus 141 ~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 141 YKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 3579999999999999999999999999999987653
No 359
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=89.42 E-value=0.36 Score=37.93 Aligned_cols=39 Identities=21% Similarity=0.495 Sum_probs=31.1
Q ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...+.+|++.|.|- |.||+++|+.|..-|++|+..++..
T Consensus 20 ~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~ 59 (269)
T 3gk3_A 20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSER 59 (269)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSC
T ss_pred hhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCc
Confidence 44578999999985 8899999999999999999988543
No 360
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=89.42 E-value=0.23 Score=42.74 Aligned_cols=37 Identities=30% Similarity=0.322 Sum_probs=31.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
.|++++|.|||+|.+|.++|+.|...|. ++..+|...
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred HhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 3468999999999999999999998888 588887643
No 361
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=89.40 E-value=0.42 Score=39.91 Aligned_cols=33 Identities=15% Similarity=0.219 Sum_probs=27.3
Q ss_pred CCEEEEEc-CCHHHHHHHHHHccCC-CEEEEEcCC
Q 044056 143 GKTVFISG-FGNIGVELAKRLRPFG-VKIIAAKRS 175 (189)
Q Consensus 143 gktvGIvG-~G~IG~~vA~~l~afG-~~V~~~~r~ 175 (189)
..+|||+| +|.||+.+++.|.... +++.+....
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~ 50 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD 50 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 46899999 9999999999997655 587777654
No 362
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=89.35 E-value=0.62 Score=37.21 Aligned_cols=37 Identities=27% Similarity=0.307 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+++|.|||-|.+|-++|..+..+|.+|..+.+...
T Consensus 150 ~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 150 YKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 4579999999999999999999999999999987653
No 363
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=89.33 E-value=0.61 Score=36.99 Aligned_cols=37 Identities=24% Similarity=0.187 Sum_probs=33.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+++|.|||-|.+|-++|..|..+|.+|..+.+...
T Consensus 143 ~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (320)
T 1trb_A 143 YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179 (320)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 3579999999999999999999999999999988654
No 364
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.31 E-value=0.32 Score=39.05 Aligned_cols=38 Identities=26% Similarity=0.341 Sum_probs=33.5
Q ss_pred CCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.+.||++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~ 61 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNED 61 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57899999986 579999999999999999999998753
No 365
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=89.23 E-value=0.35 Score=39.42 Aligned_cols=37 Identities=30% Similarity=0.315 Sum_probs=31.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCE-EEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVK-IIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~-V~~~~r~~~ 177 (189)
..|++|.|.|.|.+|...++.++++|++ |++.+++.+
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~ 196 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSE 196 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHH
Confidence 3589999999999999999999999987 467777654
No 366
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=89.23 E-value=0.56 Score=38.10 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++.+++|.|||-|.+|-++|..|..+|.+|..+.+...
T Consensus 159 ~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 197 (360)
T 3ab1_A 159 EDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE 197 (360)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred HHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC
Confidence 345789999999999999999999999999999988654
No 367
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=89.20 E-value=0.5 Score=37.38 Aligned_cols=37 Identities=30% Similarity=0.242 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+++|.|||-|.+|-++|..|..+|.+|..+.+.+.
T Consensus 142 ~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 142 FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp GBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 3579999999999999999999999999999987754
No 368
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=89.18 E-value=0.48 Score=40.43 Aligned_cols=37 Identities=24% Similarity=0.254 Sum_probs=33.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
++++.|||-|.||-++|..+..+|.+|..+.+.....
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 219 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG 219 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc
Confidence 6999999999999999999999999999999876543
No 369
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.12 E-value=0.56 Score=40.48 Aligned_cols=36 Identities=28% Similarity=0.344 Sum_probs=33.1
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 789999999999999999999999999999886543
No 370
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=88.98 E-value=0.43 Score=40.06 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=35.6
Q ss_pred CCCCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 137 TGETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 137 ~~~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
......+++|.|.| .|.||+++++.|..-|.+|++.+|+..
T Consensus 63 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 63 SLSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp SSCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred cCCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 34456788999999 599999999999999999999999865
No 371
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=88.96 E-value=0.5 Score=40.62 Aligned_cols=37 Identities=30% Similarity=0.311 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+++|.|||-|.||-++|..++.+|.+|..+.+....
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 4799999999999999999999999999999876543
No 372
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=88.96 E-value=0.58 Score=39.60 Aligned_cols=37 Identities=27% Similarity=0.317 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++++.|||-|.+|-++|..+..+|.+|..+.+....
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 5799999999999999999999999999998876543
No 373
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=88.95 E-value=0.32 Score=41.70 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+|+|.|||-|.+|-.+|..+..+|.+|....+...
T Consensus 194 ~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 194 EFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp GGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred HcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 45789999999999999999999999999998887654
No 374
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=88.86 E-value=1.4 Score=36.54 Aligned_cols=71 Identities=14% Similarity=0.059 Sum_probs=52.7
Q ss_pred HhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCC--HHHHHHHHHHccCCCEEEEEcC
Q 044056 97 LTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFG--NIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 97 ~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G--~IG~~vA~~l~afG~~V~~~~r 174 (189)
+.-.+|+|.|.-+. +..++- +++=++.+.++ .+..+.|++|+++|=| ++....+..+.-|||+|....|
T Consensus 118 A~~s~vPVINa~~~---~~HPtQ--~LaDl~Ti~e~----~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P 188 (335)
T 1dxh_A 118 AKFAGVPVFNGLTD---EYHPTQ--MLADVLTMREH----SDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAP 188 (335)
T ss_dssp HHHSSSCEEEEECS---SCCHHH--HHHHHHHHHHT----CSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHhCCCCEEcCCCC---CCCcHH--HHHHHHHHHHH----cCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECC
Confidence 34567999997654 445543 33344444454 2336899999999996 9999999999999999999988
Q ss_pred CC
Q 044056 175 SW 176 (189)
Q Consensus 175 ~~ 176 (189)
..
T Consensus 189 ~~ 190 (335)
T 1dxh_A 189 KA 190 (335)
T ss_dssp GG
T ss_pred cc
Confidence 54
No 375
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=88.84 E-value=0.33 Score=42.37 Aligned_cols=39 Identities=15% Similarity=0.301 Sum_probs=35.2
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++.+|+|+|||.|.+|-++|..+...|.+|..+.|++.
T Consensus 182 ~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 182 VDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred hccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 467899999999999999999999999999999988754
No 376
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=88.84 E-value=0.55 Score=38.81 Aligned_cols=36 Identities=25% Similarity=0.307 Sum_probs=32.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++++.|+|-|.+|-++|..+..+|.+|..+.+....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQV 180 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcch
Confidence 699999999999999999999999999999886543
No 377
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=88.73 E-value=0.7 Score=36.73 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...++++.|||-|.+|.++|..+..+|.+|..+.+...
T Consensus 170 ~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 170 IFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp GGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 45789999999999999999999999999999988754
No 378
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=88.73 E-value=0.71 Score=38.27 Aligned_cols=37 Identities=32% Similarity=0.432 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.....|.|||-|-.|..+|..|+..|.+|..+++...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3457899999999999999999999999999998754
No 379
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=88.65 E-value=0.52 Score=39.13 Aligned_cols=41 Identities=15% Similarity=-0.024 Sum_probs=33.0
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
........|.|||.|-.|..+|..|...|.+|..+++....
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 34455678999999999999999999999999999987543
No 380
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=88.56 E-value=0.54 Score=39.41 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++++.|||-|.+|-++|..+..+|.+|..+.+.+..
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 4799999999999999999999999999999887654
No 381
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=88.38 E-value=0.25 Score=44.56 Aligned_cols=38 Identities=34% Similarity=0.420 Sum_probs=32.7
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
..|++++|.|||+|.+|.++|+.|...|. ++..+|...
T Consensus 13 ~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 13 EAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 45778999999999999999999997777 688888654
No 382
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=88.34 E-value=0.64 Score=39.30 Aligned_cols=36 Identities=25% Similarity=0.249 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++++.|||-|.+|-++|..++.+|.+|..+++...
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 478999999999999999999999999999988654
No 383
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=88.33 E-value=0.3 Score=43.05 Aligned_cols=39 Identities=21% Similarity=0.184 Sum_probs=33.8
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
...|.+.+|.|||+|.+|.++|+.|...|. ++..+|...
T Consensus 27 q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~ 66 (531)
T 1tt5_A 27 QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQ 66 (531)
T ss_dssp HHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCB
T ss_pred HHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 456788999999999999999999998898 688888653
No 384
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=88.30 E-value=0.56 Score=40.39 Aligned_cols=36 Identities=36% Similarity=0.432 Sum_probs=33.2
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+++|.|||-|.||-++|..+..+|.+|..+.+...-
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 799999999999999999999999999999887643
No 385
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=88.30 E-value=3.4 Score=33.76 Aligned_cols=70 Identities=17% Similarity=0.188 Sum_probs=51.3
Q ss_pred hhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCC--HHHHHHHHHHccCCCEEEEEcCC
Q 044056 98 TNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFG--NIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 98 ~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G--~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
.-.+++|.|.-+. +..++--++ =++.+.+++ ..+.|++|+++|=| ++.+..+..+.-|||+|....|.
T Consensus 113 ~~~~vPVINa~~~---~~HPtQaLa--Dl~Ti~e~~-----g~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~ 182 (307)
T 2i6u_A 113 SVATVPVINALSD---EFHPCQVLA--DLQTIAERK-----GALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPE 182 (307)
T ss_dssp HHCSSCEEESCCS---SCCHHHHHH--HHHHHHHHH-----SCCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred hhCCCCEEcCCCC---CcCccHHHH--HHHHHHHHh-----CCcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCc
Confidence 3457999997654 445554333 333333431 25889999999986 99999999999999999999986
Q ss_pred CC
Q 044056 176 WA 177 (189)
Q Consensus 176 ~~ 177 (189)
.-
T Consensus 183 ~~ 184 (307)
T 2i6u_A 183 GF 184 (307)
T ss_dssp TS
T ss_pred cc
Confidence 44
No 386
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=88.28 E-value=0.6 Score=39.70 Aligned_cols=37 Identities=30% Similarity=0.503 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA 206 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 3689999999999999999999999999999887543
No 387
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=88.27 E-value=0.26 Score=43.46 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=29.2
Q ss_pred CEEEEEcCCHHHHHHHHHHccCCCEEEEEcCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
+++.|||-|.||-++|..+..||.+|....+.
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~ 255 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRS 255 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccc
Confidence 67999999999999999999999999887654
No 388
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=88.24 E-value=0.62 Score=39.57 Aligned_cols=35 Identities=31% Similarity=0.307 Sum_probs=32.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.+++.|||-|.||-++|..+..+|.+|..+.+...
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 201 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCc
Confidence 68999999999999999999999999999988754
No 389
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=88.16 E-value=0.66 Score=39.27 Aligned_cols=36 Identities=28% Similarity=0.258 Sum_probs=32.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERV 184 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSST
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCch
Confidence 689999999999999999999999999999876543
No 390
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=88.11 E-value=0.58 Score=38.70 Aligned_cols=39 Identities=13% Similarity=0.172 Sum_probs=31.1
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCC--EEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGV--KIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~--~V~~~~r~~~ 177 (189)
.....++|+|+|.|.+|..+|..+..-|. ++..+|....
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~ 55 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIED 55 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChH
Confidence 34567899999999999999988865565 8999998643
No 391
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=88.09 E-value=0.64 Score=39.66 Aligned_cols=36 Identities=22% Similarity=0.360 Sum_probs=32.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+++.|||-|.||-++|..++.+|.+|..+.+....
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEI 204 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 589999999999999999999999999999887543
No 392
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.93 E-value=0.63 Score=39.43 Aligned_cols=36 Identities=28% Similarity=0.422 Sum_probs=32.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+++|.|||-|.+|-++|..+..+|.+|..+.+....
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 689999999999999999999999999999886543
No 393
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.86 E-value=0.51 Score=40.20 Aligned_cols=38 Identities=24% Similarity=0.349 Sum_probs=33.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
.+++|.|||-|.+|-++|..|+.+|.+|..+.+.....
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 207 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL 207 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc
Confidence 36899999999999999999999999999998876543
No 394
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=87.80 E-value=0.85 Score=36.15 Aligned_cols=40 Identities=25% Similarity=0.297 Sum_probs=35.3
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...+.++++.|+|-|.+|.++|..+..+|.+|..+.+...
T Consensus 149 ~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 149 LQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp GGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred HHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 3456789999999999999999999999999999987654
No 395
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=87.78 E-value=0.67 Score=39.50 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=33.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHV 213 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCcc
Confidence 589999999999999999999999999999887543
No 396
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=87.76 E-value=0.69 Score=39.62 Aligned_cols=36 Identities=31% Similarity=0.381 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+++.|||-|.||-++|..+..+|.+|..+.+.+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 368999999999999999999999999999988754
No 397
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=87.70 E-value=0.7 Score=39.44 Aligned_cols=35 Identities=40% Similarity=0.496 Sum_probs=32.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.+++.|||-|.||-++|..++.+|.+|..+.+...
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDR 200 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 58999999999999999999999999999988754
No 398
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=87.69 E-value=0.48 Score=38.94 Aligned_cols=36 Identities=14% Similarity=0.087 Sum_probs=25.1
Q ss_pred CCEEEEEcCCHHHHHHHHHHccC--------CCEEE-EEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPF--------GVKII-AAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~af--------G~~V~-~~~r~~~~ 178 (189)
--+|||||+|.||+.-++.++++ +++|. .+|+++..
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~ 69 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGL 69 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TT
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHH
Confidence 35899999999999877766553 56765 45776544
No 399
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=87.60 E-value=0.74 Score=38.90 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+++|.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV 184 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 3799999999999999999999999999999876544
No 400
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=87.56 E-value=0.55 Score=40.22 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=33.1
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++++.|||-|.||-++|..++.+|.+|..+.+....
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~ 220 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGL 220 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 799999999999999999999999999999887543
No 401
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=87.55 E-value=0.72 Score=39.08 Aligned_cols=36 Identities=25% Similarity=0.318 Sum_probs=32.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+++|.|||-|.+|-++|..++.+|.+|..+.+....
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 589999999999999999999999999999876543
No 402
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=87.44 E-value=1.7 Score=37.76 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCC----------HHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 116 ASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFG----------NIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 116 ~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G----------~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
+.+.++++-.+...+.+ .+..+.|++|+|+|+- .=...+++.|...|++|.+|||.....
T Consensus 330 ~~~~~~~~~~i~~~l~~----~~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~ 399 (478)
T 3g79_A 330 DFMPAHMYNLTVAALER----LGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNY 399 (478)
T ss_dssp HHHHHHHHHHHHHHHHT----TTCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCB
T ss_pred HHHHHHHHHHHHHHHhh----cccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccc
Confidence 34555555555554432 3567899999999984 346899999999999999999987643
No 403
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=87.33 E-value=0.49 Score=40.30 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=26.7
Q ss_pred CEEEEEcCCHHHH-HHHHHHccC-CCEE-EEEcCCC
Q 044056 144 KTVFISGFGNIGV-ELAKRLRPF-GVKI-IAAKRSW 176 (189)
Q Consensus 144 ktvGIvG~G~IG~-~vA~~l~af-G~~V-~~~~r~~ 176 (189)
.+|||||+|.||+ ..++.+... ++++ ..+|++.
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~ 119 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNA 119 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCH
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCH
Confidence 5899999999997 899988765 6775 4677764
No 404
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=87.29 E-value=0.48 Score=38.67 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=31.4
Q ss_pred CCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEc-CCC
Q 044056 140 TLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAK-RSW 176 (189)
Q Consensus 140 ~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~-r~~ 176 (189)
.+.+|++.|.| .|.||+++|+.|..-|++|+..+ |+.
T Consensus 43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~ 81 (328)
T 2qhx_A 43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA 81 (328)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 47899999987 57999999999999999999998 754
No 405
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=87.23 E-value=0.48 Score=38.74 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=25.1
Q ss_pred CEEEEEcCCHHHHH-HHHHHccC-CCEEE-EEcCCCC
Q 044056 144 KTVFISGFGNIGVE-LAKRLRPF-GVKII-AAKRSWA 177 (189)
Q Consensus 144 ktvGIvG~G~IG~~-vA~~l~af-G~~V~-~~~r~~~ 177 (189)
.++||||+|.||+. .+..++.. +++|. .+|+++.
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~ 60 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLT 60 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHH
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHH
Confidence 38999999999986 56666644 78876 4677643
No 406
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=87.20 E-value=0.52 Score=36.89 Aligned_cols=37 Identities=22% Similarity=0.350 Sum_probs=28.5
Q ss_pred CCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEc
Q 044056 137 TGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAK 173 (189)
Q Consensus 137 ~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~ 173 (189)
....+.+|++.|.|- |.||+++|+.|..-|++|+...
T Consensus 20 ~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~ 57 (267)
T 4iiu_A 20 FQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHY 57 (267)
T ss_dssp -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred hccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 345788999999976 7899999999999999996644
No 407
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=87.17 E-value=0.76 Score=39.08 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRC 209 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcc
Confidence 3689999999999999999999999999999887543
No 408
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=87.13 E-value=0.57 Score=36.92 Aligned_cols=36 Identities=22% Similarity=0.348 Sum_probs=29.1
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 140 TLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 140 ~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
.+.||++.|.|- |.||+++|+.|..-|++|+..+++
T Consensus 24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~ 60 (267)
T 3u5t_A 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAG 60 (267)
T ss_dssp ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 467999999975 799999999999999999887443
No 409
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=87.08 E-value=0.36 Score=40.35 Aligned_cols=38 Identities=24% Similarity=0.190 Sum_probs=33.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCcc
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASHS 180 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~~ 180 (189)
+++|.|||-|.+|-++|..|..+|.+|..+.+.+...+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 68999999999999999999999999999988765433
No 410
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=86.90 E-value=0.71 Score=39.39 Aligned_cols=35 Identities=31% Similarity=0.281 Sum_probs=32.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
++++.|||-|.||-++|..+..+|.+|..+.+...
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 68999999999999999999999999999987654
No 411
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=86.85 E-value=1.3 Score=35.23 Aligned_cols=38 Identities=18% Similarity=0.200 Sum_probs=32.9
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.....+++|.|||-|.+|-++|..+..+| +|..+.+..
T Consensus 158 ~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 158 PAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred hhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 44567899999999999999999999998 788887663
No 412
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=86.82 E-value=0.49 Score=39.98 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=31.2
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.+.|.|||-|-.|..+|..|...|.+|..+++..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3689999999999999999999999999999875
No 413
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=86.66 E-value=0.86 Score=39.56 Aligned_cols=38 Identities=21% Similarity=0.181 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
+.++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 212 ~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 212 EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 34699999999999999999999999999999887643
No 414
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=86.66 E-value=0.97 Score=35.92 Aligned_cols=36 Identities=22% Similarity=0.191 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
..++++.|||-|.+|-++|..+..+|.+|..+.+..
T Consensus 153 ~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 153 FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 347999999999999999999999999999988764
No 415
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=86.58 E-value=0.57 Score=41.88 Aligned_cols=39 Identities=23% Similarity=0.191 Sum_probs=33.1
Q ss_pred CCCCCEEEEEc-CCHHHHHHHHHHccC-CCEEEEEcCCCCC
Q 044056 140 TLLGKTVFISG-FGNIGVELAKRLRPF-GVKIIAAKRSWAS 178 (189)
Q Consensus 140 ~l~gktvGIvG-~G~IG~~vA~~l~af-G~~V~~~~r~~~~ 178 (189)
.+.+++|.|.| .|.||+.+++.|..- |.+|++.+|+...
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~ 352 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA 352 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTT
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchh
Confidence 35789999999 699999999999877 8999999987654
No 416
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.45 E-value=0.96 Score=35.18 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+.++++.|+|-|.+|-++|..+..+| +|..+.+...
T Consensus 137 ~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 137 YELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp GGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred hhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 3456899999999999999999999999 9999987654
No 417
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=86.42 E-value=0.9 Score=38.61 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=32.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 689999999999999999999999999999876543
No 418
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=86.21 E-value=4.4 Score=32.91 Aligned_cols=70 Identities=11% Similarity=0.048 Sum_probs=50.7
Q ss_pred HhhCCeEEEec-CCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC---CHHHHHHHHHHccC-CCEEEE
Q 044056 97 LTNCAIKAARI-LGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF---GNIGVELAKRLRPF-GVKIIA 171 (189)
Q Consensus 97 ~~~~gI~v~n~-~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~---G~IG~~vA~~l~af-G~~V~~ 171 (189)
+.-.+++|.|. -|. +..++--++ =++.+.+++ ..+.|++|+++|= +++....+..+.-| ||+|..
T Consensus 112 a~~~~vPVINaG~g~---~~HPtQ~La--Dl~Ti~e~~-----g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~ 181 (299)
T 1pg5_A 112 SEISDIPVINAGDGK---HEHPTQAVI--DIYTINKHF-----NTIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYL 181 (299)
T ss_dssp HHHCSSCEEEEEETT---TBCHHHHHH--HHHHHHHHH-----SCSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEE
T ss_pred HHhCCCCEEeCCCCC---CcCcHHHHH--HHHHHHHHh-----CCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEE
Confidence 34567999998 554 444443333 333333331 2588999999998 59999999999999 999999
Q ss_pred EcCCC
Q 044056 172 AKRSW 176 (189)
Q Consensus 172 ~~r~~ 176 (189)
..|..
T Consensus 182 ~~P~~ 186 (299)
T 1pg5_A 182 ISPQL 186 (299)
T ss_dssp ECCGG
T ss_pred ECCch
Confidence 98854
No 419
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=86.21 E-value=0.63 Score=37.88 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=28.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCC--EEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGV--KIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~--~V~~~~r~~~ 177 (189)
.++|+|||.|.+|..+|..+..-|. +|..+|....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 3789999999999999988875566 9999998764
No 420
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=86.17 E-value=0.54 Score=43.23 Aligned_cols=36 Identities=31% Similarity=0.343 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
|++.+|.|||+|.+|..+|+.|...|. ++..+|...
T Consensus 409 l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~ 445 (805)
T 2nvu_B 409 LDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 445 (805)
T ss_dssp HHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCB
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCe
Confidence 389999999999999999999998888 688888754
No 421
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=86.16 E-value=0.96 Score=37.76 Aligned_cols=37 Identities=30% Similarity=0.346 Sum_probs=33.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
++++.|||-|.+|.++|..+..+|.+|..+.+.....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 7999999999999999999999999999998876543
No 422
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=86.10 E-value=0.87 Score=39.59 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+++|.|||-|.+|-++|..+..+|.+|..+.+....
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 3689999999999999999999999999999887544
No 423
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=86.01 E-value=0.86 Score=38.03 Aligned_cols=37 Identities=11% Similarity=-0.011 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.+.+.+|||+|-| .|+.+++.++.+|++|+.+|++..
T Consensus 15 ~~~~~~I~ilGs~-l~~~l~~aAk~lG~~vi~vd~~~~ 51 (361)
T 2r7k_A 15 NKDEITIATLGSH-TSLHILKGAKLEGFSTVCITMKGR 51 (361)
T ss_dssp CTTSCEEEEESST-THHHHHHHHHHTTCCEEEEECTTS
T ss_pred cccCCEEEEECcH-HHHHHHHHHHHCCCEEEEEECCCC
Confidence 4456889999988 999999999999999999998854
No 424
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=85.98 E-value=1 Score=38.30 Aligned_cols=37 Identities=30% Similarity=0.380 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++++.|||-|.+|-++|..+..+|.+|..+.+....
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 4689999999999999999999999999999886543
No 425
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=85.95 E-value=0.73 Score=39.71 Aligned_cols=33 Identities=15% Similarity=0.357 Sum_probs=25.8
Q ss_pred CEEEEEcCCHHHHHHHHHHcc-CCCEEE-EEcCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRP-FGVKII-AAKRSW 176 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~a-fG~~V~-~~~r~~ 176 (189)
-+|||||+|.||+..++.+.. -+++|. .+|+.+
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~ 58 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRL 58 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSST
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCH
Confidence 589999999999999988874 477754 455554
No 426
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=85.84 E-value=0.68 Score=39.43 Aligned_cols=34 Identities=15% Similarity=0.076 Sum_probs=27.8
Q ss_pred CEEEEEcCCHHHHHHHHHHccC-CCEEE-EEcCCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPF-GVKII-AAKRSWA 177 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~af-G~~V~-~~~r~~~ 177 (189)
.+|||||+|.||+..++.+... +++|. .+|+++.
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~ 56 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPY 56 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHH
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHH
Confidence 5899999999999999988865 78864 6677653
No 427
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=85.82 E-value=0.89 Score=37.87 Aligned_cols=37 Identities=27% Similarity=0.326 Sum_probs=33.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCCc
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWASH 179 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~~ 179 (189)
++++.|+|-|.+|-++|..+..+|.+|..+.+.+...
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 7899999999999999999999999999998876543
No 428
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=85.79 E-value=1.4 Score=36.44 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=51.2
Q ss_pred hhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCC--HHHHHHHHHHccCCCEEEEEcCC
Q 044056 98 TNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFG--NIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 98 ~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G--~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
.-.+|+|.|.-+. +..++-- ++=++.+.+++ .+..+.|++|+++|=| ++....+..+.-|||+|....|.
T Consensus 118 ~~~~vPVINa~~~---~~HPtQ~--LaDl~Ti~e~~---~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~ 189 (333)
T 1duv_G 118 EYASVPVWNGLTN---EFHPTQL--LADLLTMQEHL---PGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQ 189 (333)
T ss_dssp HHHSSCEEESCCS---SCCHHHH--HHHHHHHHHHS---TTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCG
T ss_pred HhCCCCeEcCCCC---CCCchHH--HHHHHHHHHHh---cCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCc
Confidence 3457999997654 4455543 33334444431 1326899999999986 99999999999999999999885
Q ss_pred C
Q 044056 176 W 176 (189)
Q Consensus 176 ~ 176 (189)
.
T Consensus 190 ~ 190 (333)
T 1duv_G 190 A 190 (333)
T ss_dssp G
T ss_pred c
Confidence 4
No 429
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=85.67 E-value=0.9 Score=38.47 Aligned_cols=37 Identities=22% Similarity=0.147 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENL 182 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcc
Confidence 3689999999999999999999999999999887543
No 430
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=85.36 E-value=1.3 Score=38.01 Aligned_cols=38 Identities=26% Similarity=0.296 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHc--------------------cCCC-EEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLR--------------------PFGV-KIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~--------------------afG~-~V~~~~r~~~ 177 (189)
.+.+++|.|||-|.+|-++|+.|. ..|. +|..+.|...
T Consensus 142 ~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 142 DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 457999999999999999999998 6898 6988887653
No 431
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.34 E-value=0.62 Score=39.57 Aligned_cols=37 Identities=19% Similarity=0.330 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 212 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 3689999999999999999999999999999887543
No 432
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=85.31 E-value=0.64 Score=39.82 Aligned_cols=36 Identities=31% Similarity=0.360 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.+++|.|||-|.+|-++|..++.+|.+|..+.+...
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 579999999999999999999999999999987643
No 433
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=85.30 E-value=5.2 Score=33.89 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=46.6
Q ss_pred eEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC-----C---HHHHHHHHHHccCCCEEEEEc
Q 044056 102 IKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF-----G---NIGVELAKRLRPFGVKIIAAK 173 (189)
Q Consensus 102 I~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~-----G---~IG~~vA~~l~afG~~V~~~~ 173 (189)
++|.|.-+. +..++--++ =++.+.+++. ....|.|++|+|+|- | ++....+..+.-|||+|....
T Consensus 157 ~PVINal~d---~~HPtQaLa--Dl~TI~E~~G--~~~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~ 229 (399)
T 3q98_A 157 PALVNLQCD---IDHPTQSMA--DLAWLREHFG--SLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAH 229 (399)
T ss_dssp CEEEEEECS---SCCHHHHHH--HHHHHHHHHS--SSGGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEEC
T ss_pred CcEEeCCCC---CcCcHHHHH--HHHHHHHHhC--CccccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEEC
Confidence 589998654 445553333 3333333311 123588999999983 4 788999999999999999998
Q ss_pred CCC
Q 044056 174 RSW 176 (189)
Q Consensus 174 r~~ 176 (189)
|..
T Consensus 230 P~~ 232 (399)
T 3q98_A 230 PEG 232 (399)
T ss_dssp CTT
T ss_pred Ccc
Confidence 863
No 434
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=85.27 E-value=0.45 Score=38.05 Aligned_cols=39 Identities=36% Similarity=0.369 Sum_probs=32.8
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHccCCC---EEEEEcCCCC
Q 044056 139 ETLLGKTVFISGF-GNIGVELAKRLRPFGV---KIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG~-G~IG~~vA~~l~afG~---~V~~~~r~~~ 177 (189)
..+.||++.|.|- |.||+++|+.|..-|. +|+..+|+..
T Consensus 29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~ 71 (287)
T 3rku_A 29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLE 71 (287)
T ss_dssp HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHH
Confidence 3578999999985 7899999999976666 9999998753
No 435
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=85.08 E-value=0.55 Score=37.21 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=30.7
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+. |++.|.| .|.||+++|+.|..-|++|+..+|+..
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~ 56 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREE 56 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4566 8888887 478999999999999999999998753
No 436
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=85.06 E-value=0.6 Score=44.31 Aligned_cols=37 Identities=27% Similarity=0.491 Sum_probs=31.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCC------EEEEEcCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGV------KIIAAKRSW 176 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~------~V~~~~r~~ 176 (189)
.|++.+|.|||+|.+|.++++.|...|. ++..+|...
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~ 464 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDS 464 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCB
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCE
Confidence 4678999999999999999999987776 788888643
No 437
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=85.01 E-value=5.9 Score=32.27 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=49.0
Q ss_pred HhhCCeEEEecC-CCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCC---HHHHHHHHHHccCCCEEEEE
Q 044056 97 LTNCAIKAARIL-GDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFG---NIGVELAKRLRPFGVKIIAA 172 (189)
Q Consensus 97 ~~~~gI~v~n~~-g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G---~IG~~vA~~l~afG~~V~~~ 172 (189)
+...+|+|.|.- |. +..++--+ +=++.+.+++ ..+.|++|+++|=| ++.+..+..+.-|||+|...
T Consensus 110 a~~~~vPVINagdg~---~~HPtQaL--aDl~Ti~e~~-----g~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~ 179 (304)
T 3r7f_A 110 VSQVNIPILNAGDGC---GQHPTQSL--LDLMTIYEEF-----NTFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFS 179 (304)
T ss_dssp HHHCSSCEEESCCTT---SCCHHHHH--HHHHHHHHHH-----SCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHhCCCCEEeCCCCC---CcCcHHHH--HHHHHHHHHh-----CCCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEE
Confidence 344689999985 33 33444333 3333333331 25889999999975 79999999999999999998
Q ss_pred cCC
Q 044056 173 KRS 175 (189)
Q Consensus 173 ~r~ 175 (189)
.|.
T Consensus 180 ~P~ 182 (304)
T 3r7f_A 180 GPS 182 (304)
T ss_dssp SCG
T ss_pred CCC
Confidence 874
No 438
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=85.00 E-value=1.2 Score=34.86 Aligned_cols=37 Identities=27% Similarity=0.179 Sum_probs=33.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..++++.|+|-|.+|-++|..+..+|.+|..+.+...
T Consensus 145 ~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 145 YKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp GTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 4579999999999999999999999999999987654
No 439
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=84.94 E-value=0.78 Score=39.30 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+++|.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 4689999999999999999999999999999876543
No 440
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=84.81 E-value=0.94 Score=36.75 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=27.3
Q ss_pred CEEEEEc-CCHHHHHHHHHHc-cCCCEEE-EEcCCCC
Q 044056 144 KTVFISG-FGNIGVELAKRLR-PFGVKII-AAKRSWA 177 (189)
Q Consensus 144 ktvGIvG-~G~IG~~vA~~l~-afG~~V~-~~~r~~~ 177 (189)
.+|+|+| +|++|+.+++.+. .=++++. ++|+...
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~ 58 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS 58 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc
Confidence 4899999 9999999999876 5588855 4577643
No 441
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=84.72 E-value=0.94 Score=35.65 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
...++++.|+|-|.+|-++|..+...|.+|..+.+...
T Consensus 151 ~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 151 LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp GGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred HcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 44689999999999999999999999999999988754
No 442
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=84.72 E-value=1.1 Score=38.01 Aligned_cols=37 Identities=19% Similarity=0.221 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 4689999999999999999999999999999876543
No 443
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=84.70 E-value=4.9 Score=33.09 Aligned_cols=94 Identities=17% Similarity=0.134 Sum_probs=59.8
Q ss_pred HHHHhcCCCCeEEEEcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEE
Q 044056 70 SNVITRANPMNLIIRFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFIS 149 (189)
Q Consensus 70 ~~~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIv 149 (189)
...|.++.. .|......-..+ ...+.-.+++|.|.-+. +..++--++ =++.+.+++ ..+.|++|+++
T Consensus 107 arvLs~~~D--~iviR~~~~~~~-~~lA~~~~vPVINa~~~---~~HPtQaLa--Dl~Ti~e~~-----g~l~gl~va~v 173 (325)
T 1vlv_A 107 ARVLGRMVD--AIMFRGYKQETV-EKLAEYSGVPVYNGLTD---EFHPTQALA--DLMTIEENF-----GRLKGVKVVFM 173 (325)
T ss_dssp HHHHHTTCS--EEEEESSCHHHH-HHHHHHHCSCEEESCCS---SCCHHHHHH--HHHHHHHHH-----SCSTTCEEEEE
T ss_pred HHHHHHhCC--EEEEECCChHHH-HHHHHhCCCCEEeCCCC---CCCcHHHHH--HHHHHHHHh-----CCcCCcEEEEE
Confidence 345666644 333333221112 22333457999996543 445544333 333333431 26899999999
Q ss_pred cCC--HHHHHHHHHHccCCCEEEEEcCCC
Q 044056 150 GFG--NIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 150 G~G--~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
|=| ++.+..+..+.-|||+|....|..
T Consensus 174 GD~~~rva~Sl~~~~~~~G~~v~~~~P~~ 202 (325)
T 1vlv_A 174 GDTRNNVATSLMIACAKMGMNFVACGPEE 202 (325)
T ss_dssp SCTTSHHHHHHHHHHHHTTCEEEEESCGG
T ss_pred CCCCcCcHHHHHHHHHHCCCEEEEECCcc
Confidence 986 999999999999999999998854
No 444
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=84.67 E-value=0.55 Score=43.31 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 140 TLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 140 ~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
--.|.+|.|.|. |.||....+.++.+|++|++.+++.
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~ 380 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED 380 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH
Confidence 346899999995 9999999999999999999988654
No 445
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=84.57 E-value=0.66 Score=41.35 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=31.5
Q ss_pred CCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcC
Q 044056 136 PTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 136 ~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r 174 (189)
.....+.||++.|.|- |.||+++|+.|..-|++|+..++
T Consensus 12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r 51 (613)
T 3oml_A 12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDL 51 (613)
T ss_dssp ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3456799999999986 67999999999999999999987
No 446
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=84.48 E-value=6.9 Score=31.66 Aligned_cols=71 Identities=14% Similarity=0.068 Sum_probs=50.7
Q ss_pred HHhhCCeEEEe-cCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC---CHHHHHHHHHHccCCCEEEE
Q 044056 96 ALTNCAIKAAR-ILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF---GNIGVELAKRLRPFGVKIIA 171 (189)
Q Consensus 96 ~~~~~gI~v~n-~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~---G~IG~~vA~~l~afG~~V~~ 171 (189)
.++-.+++|.| .-|. +..++--+ +=++.+.+++ ..+.|++|+++|= +++.+..+..+.-|||+|..
T Consensus 108 la~~~~vPVINAG~g~---~~HPtQaL--aDl~Ti~e~~-----g~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~ 177 (291)
T 3d6n_B 108 IVKSLNLRLVNAGDGT---HQHPSQGL--IDFFTIKEHF-----GEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGV 177 (291)
T ss_dssp HHHTCSSEEEEEEETT---TBCHHHHH--HHHHHHHHHH-----SCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhCCCCEEeCccCC---CcCcHHHH--HHHHHHHHHh-----CCcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEE
Confidence 34456799999 4343 44444333 3333333331 2588999999997 99999999999999999999
Q ss_pred EcCCC
Q 044056 172 AKRSW 176 (189)
Q Consensus 172 ~~r~~ 176 (189)
..|..
T Consensus 178 ~~P~~ 182 (291)
T 3d6n_B 178 CGPKT 182 (291)
T ss_dssp ESCGG
T ss_pred ECCch
Confidence 98854
No 447
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=84.43 E-value=1.1 Score=38.40 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=35.0
Q ss_pred CCCCCCCEEEEEcCC----------HHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGFG----------NIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~G----------~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+..+.|++|+|+|+- .=...+++.|...|++|.+|||...
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~ 362 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAM 362 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCH
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCc
Confidence 457899999999984 4578999999999999999999874
No 448
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=84.40 E-value=0.83 Score=37.38 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=29.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHccCC-CEEEEEcC
Q 044056 141 LLGKTVFISGF-GNIGVELAKRLRPFG-VKIIAAKR 174 (189)
Q Consensus 141 l~gktvGIvG~-G~IG~~vA~~l~afG-~~V~~~~r 174 (189)
-.|++|.|.|. |.+|...++.++..| .+|++.+.
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~ 176 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS 176 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC
Confidence 35899999999 999999999999985 78888764
No 449
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=84.35 E-value=1.1 Score=38.02 Aligned_cols=36 Identities=22% Similarity=0.258 Sum_probs=32.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+++.|+|-|.||-++|..+..+|.+|..+.+...-
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 578999999999999999999999999998876543
No 450
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=84.21 E-value=1.3 Score=38.75 Aligned_cols=37 Identities=24% Similarity=0.343 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.++++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQV 222 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 4789999999999999999999999999999876543
No 451
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=84.10 E-value=0.98 Score=38.75 Aligned_cols=38 Identities=24% Similarity=0.354 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEc-CCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 139 ETLLGKTVFISG-FGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 139 ~~l~gktvGIvG-~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
..+.||++.|.| .|.||+++|+.|..-|++|+..+|+.
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~ 247 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG 247 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 457899999997 69999999999998999999998864
No 452
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=84.07 E-value=1.2 Score=38.49 Aligned_cols=36 Identities=17% Similarity=0.373 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+.|.|||-|..|...|..|...|.+|..+++...
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc
Confidence 467899999999999999999999999999998643
No 453
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=83.74 E-value=0.69 Score=39.07 Aligned_cols=36 Identities=22% Similarity=0.058 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccC--CCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPF--GVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~af--G~~V~~~~r~~~ 177 (189)
.+++|.|||-|.+|-++|..|... |.+|..+.|+..
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 589999999999999999999988 899999988764
No 454
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=83.73 E-value=5.3 Score=32.47 Aligned_cols=71 Identities=21% Similarity=0.138 Sum_probs=51.7
Q ss_pred HhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 97 LTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 97 ~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
+.-.+++|.|.-+. +..++--++ =++.+.+++ ..+.|++|+++|= +++.+..+..+.-||++|....|.
T Consensus 118 a~~~~vPVINa~~~---~~HPtQaLa--Dl~Ti~e~~-----g~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~ 187 (301)
T 2ef0_A 118 ARHAKVPVVNALSD---RAHPLQALA--DLLTLKEVF-----GGLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPK 187 (301)
T ss_dssp HHHCSSCEEEEECS---SCCHHHHHH--HHHHHHHHH-----SCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHCCCCEEeCCCC---ccCchHHHH--HHHHHHHHh-----CCcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCc
Confidence 34457999997664 445554333 333333331 2588999999997 899999999999999999999986
Q ss_pred CC
Q 044056 176 WA 177 (189)
Q Consensus 176 ~~ 177 (189)
.-
T Consensus 188 ~~ 189 (301)
T 2ef0_A 188 GY 189 (301)
T ss_dssp TC
T ss_pred hh
Confidence 43
No 455
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=83.72 E-value=0.55 Score=39.42 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=24.5
Q ss_pred CEEEEEcCCHHHHHHHHHHccC---------CCEEEE-EcCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPF---------GVKIIA-AKRSW 176 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~af---------G~~V~~-~~r~~ 176 (189)
.+|||||+|.||+.-++.++.. +++|.+ +|+.+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~ 69 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQ 69 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSH
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCH
Confidence 4899999999999887777643 467654 56654
No 456
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=83.55 E-value=0.8 Score=39.26 Aligned_cols=37 Identities=30% Similarity=0.324 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
-.+++|.|||-|..|...|..|...|.+|..+++...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 4688999999999999999999988999999998643
No 457
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.45 E-value=0.6 Score=39.62 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=31.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHccCCC---EEEEEcCCC
Q 044056 142 LGKTVFISGF-GNIGVELAKRLRPFGV---KIIAAKRSW 176 (189)
Q Consensus 142 ~gktvGIvG~-G~IG~~vA~~l~afG~---~V~~~~r~~ 176 (189)
..-+|.|+|. |..|+..++.++++|+ .|..||++.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 4668899999 9999999999999998 899999865
No 458
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=83.44 E-value=7.2 Score=31.91 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=51.4
Q ss_pred HhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 97 LTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 97 ~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
+.-.+++|.|.-+. +..++--++ =++.+.+++ ..+.|++|+++|= +++.+..+..+.-||++|....|.
T Consensus 119 A~~~~vPVINa~~~---~~HPtQaLa--Dl~Ti~e~~-----g~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~ 188 (315)
T 1pvv_A 119 AKYATVPVINGLSD---FSHPCQALA--DYMTIWEKK-----GTIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE 188 (315)
T ss_dssp HHHCSSCEEEEECS---SCCHHHHHH--HHHHHHHHH-----SCCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHhCCCCEEcCCCC---CCCcHHHHH--HHHHHHHHh-----CCcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCc
Confidence 34457999997553 445544333 333333431 2688999999997 899999999999999999999986
Q ss_pred CC
Q 044056 176 WA 177 (189)
Q Consensus 176 ~~ 177 (189)
.-
T Consensus 189 ~~ 190 (315)
T 1pvv_A 189 GY 190 (315)
T ss_dssp TC
T ss_pred cc
Confidence 43
No 459
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=83.43 E-value=1 Score=42.79 Aligned_cols=39 Identities=26% Similarity=0.297 Sum_probs=34.2
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSW 176 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~ 176 (189)
...|.+++|.|+|+|.+|.++|+.|..-|. ++..+|...
T Consensus 22 q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~ 61 (1015)
T 3cmm_A 22 MLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEP 61 (1015)
T ss_dssp HHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSB
T ss_pred HHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCE
Confidence 456889999999999999999999998887 688888754
No 460
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=83.40 E-value=4.8 Score=33.60 Aligned_cols=94 Identities=16% Similarity=0.036 Sum_probs=61.2
Q ss_pred HHHHhcCCCCeEEEEcCCCCCcCChhHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEE
Q 044056 70 SNVITRANPMNLIIRFRVGLEGVDIDALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFIS 149 (189)
Q Consensus 70 ~~~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIv 149 (189)
...|.++.. .|....-.-..+ ...+.-.+|+|.|.-+. +..++--++ =++.+.+++ ..+.|++|+++
T Consensus 116 arvLs~~~D--~IviR~~~~~~~-~~lA~~s~vPVINa~~~---~~HPtQaLa--Dl~Ti~E~~-----g~l~gl~va~v 182 (359)
T 2w37_A 116 AKVLGSMFD--GIEFRGFKQSDA-EILARDSGVPVWNGLTD---EWHPTQMLA--DFMTVKENF-----GKLQGLTLTFM 182 (359)
T ss_dssp HHHHHHHCS--EEEEESSCHHHH-HHHHHHSSSCEEEEECS---SCCHHHHHH--HHHHHHHHH-----SCCTTCEEEEE
T ss_pred HHHHHHhcC--EEEEecCChHHH-HHHHHhCCCCEEcCCCC---CCCccHHHH--HHHHHHHHh-----CCcCCeEEEEE
Confidence 445666644 343443321112 23344568999997654 445554333 333333431 26889999999
Q ss_pred cCC--HHHHHHHHHHccCCCEEEEEcCCC
Q 044056 150 GFG--NIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 150 G~G--~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
|=| ++....+..+.-|||+|....|..
T Consensus 183 GD~~~rva~Sl~~~~~~lG~~v~~~~P~~ 211 (359)
T 2w37_A 183 GDGRNNVANSLLVTGAILGVNIHIVAPKA 211 (359)
T ss_dssp SCTTSHHHHHHHHHHHHHTCEEEEECCGG
T ss_pred CCCccchHHHHHHHHHHcCCEEEEECCcc
Confidence 986 999999999999999999998854
No 461
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=83.34 E-value=1.1 Score=38.57 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=32.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHccC---CCEEEEEcCCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPF---GVKIIAAKRSWAS 178 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~af---G~~V~~~~r~~~~ 178 (189)
.+++.|||-|.||-++|..++.+ |.+|..+.+....
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 68999999999999999999999 9999999887543
No 462
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=83.14 E-value=5.2 Score=33.14 Aligned_cols=75 Identities=11% Similarity=0.054 Sum_probs=52.5
Q ss_pred HHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcC
Q 044056 96 ALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 96 ~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r 174 (189)
.+...+|+|.|.-+. +..++- +++=++.+.++++ .+..+.|++|++||= +++....+..+.-|||+|....|
T Consensus 135 lA~~~~vPVINag~~---~~HPtQ--aLaDl~Ti~e~~~--~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P 207 (339)
T 4a8t_A 135 LANCATIPVINGMSD---YNHPTQ--ELGDLCTMVEHLP--EGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGP 207 (339)
T ss_dssp HHHHCSSCEEECCCS---SCCHHH--HHHHHHHHHHTCC--TTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHhCCCCEEECCCC---CcCcHH--HHHHHHHHHHHhh--cCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECC
Confidence 345568999998654 434443 3344444455421 133689999999986 68888899999999999999988
Q ss_pred CCC
Q 044056 175 SWA 177 (189)
Q Consensus 175 ~~~ 177 (189)
..-
T Consensus 208 ~~~ 210 (339)
T 4a8t_A 208 EGF 210 (339)
T ss_dssp TTS
T ss_pred ccc
Confidence 543
No 463
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.05 E-value=0.96 Score=35.91 Aligned_cols=35 Identities=23% Similarity=0.103 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
..+.|.|||-|..|-..|..|...|.+|..+++..
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46789999999999999999999999999999854
No 464
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=83.01 E-value=1.2 Score=38.34 Aligned_cols=35 Identities=26% Similarity=0.288 Sum_probs=32.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHccC---CCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPF---GVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~af---G~~V~~~~r~~~ 177 (189)
.+++.|||-|.||-++|..+..+ |.+|..+.+...
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 224 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 224 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCC
Confidence 68999999999999999999999 999999988754
No 465
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=82.78 E-value=1.2 Score=38.32 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
..+++.|||-|.||-++|..+..+|.+|..+.+....
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHV 217 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 3589999999999999999999999999999887544
No 466
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=82.67 E-value=1.4 Score=36.10 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=31.1
Q ss_pred CCEEEEEcCCHHHHHHHHHHcc-CC-CEEEEEcCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRP-FG-VKIIAAKRSW 176 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~a-fG-~~V~~~~r~~ 176 (189)
...|.|||-|-+|..+|..|.. .| .+|..+++..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 4579999999999999999998 89 9999999875
No 467
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=82.62 E-value=5.5 Score=33.22 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=52.0
Q ss_pred HhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC-CHHHHHHHHHHccCCCEEEEEcCC
Q 044056 97 LTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF-GNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 97 ~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~-G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
+...+|+|.|.-+. +..++- +++=++.+.++++ .+..+.|++|++||= +++....+..+.-|||+|....|.
T Consensus 114 A~~~~vPVINag~~---~~HPtQ--aLaDl~TI~E~~~--~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~ 186 (355)
T 4a8p_A 114 ANCATIPVINGMSD---YNHPTQ--ELGDLCTMVEHLP--EGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPE 186 (355)
T ss_dssp HHHCSSCEEECCCS---SCCHHH--HHHHHHHHHHTCC--TTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHhCCCCEEeCCCC---CCCcHH--HHHHHHHHHHHhh--cCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCC
Confidence 44568999998654 434443 3344444455421 133689999999986 688888999999999999999886
Q ss_pred CC
Q 044056 176 WA 177 (189)
Q Consensus 176 ~~ 177 (189)
.-
T Consensus 187 ~~ 188 (355)
T 4a8p_A 187 GF 188 (355)
T ss_dssp TS
T ss_pred cc
Confidence 43
No 468
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=82.56 E-value=1 Score=37.73 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCC-CEEEEEcCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFG-VKIIAAKRS 175 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG-~~V~~~~r~ 175 (189)
....|.|||-|-+|..+|..|...| .+|..+++.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 3457999999999999999999889 999999983
No 469
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=82.36 E-value=2.1 Score=36.89 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=33.3
Q ss_pred CCCCCCCEEEEEcCCHHHHHHHHHHc--cCCCEEEEEcCCCC
Q 044056 138 GETLLGKTVFISGFGNIGVELAKRLR--PFGVKIIAAKRSWA 177 (189)
Q Consensus 138 ~~~l~gktvGIvG~G~IG~~vA~~l~--afG~~V~~~~r~~~ 177 (189)
...+.||+|+|||.|..|-.++.-|. .-+.+|..+.|++.
T Consensus 241 ~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 241 KDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred ccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 45689999999999999999987773 45789999888753
No 470
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=82.07 E-value=1.5 Score=37.50 Aligned_cols=37 Identities=16% Similarity=0.129 Sum_probs=32.4
Q ss_pred CCCEEEEEcCC-HHHHHHHHHHcc-CCCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFG-NIGVELAKRLRP-FGVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G-~IG~~vA~~l~a-fG~~V~~~~r~~~~ 178 (189)
.+|++.|.|-+ .||+++|+.|.. -|++|+..++....
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~ 98 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPG 98 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchh
Confidence 58999999875 799999999998 99999999887544
No 471
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=82.02 E-value=1.6 Score=37.05 Aligned_cols=36 Identities=33% Similarity=0.452 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++++.|+|-|.+|-++|..+..+|.+|..+.+...
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 378999999999999999999999999999987654
No 472
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=81.94 E-value=1.4 Score=37.43 Aligned_cols=37 Identities=24% Similarity=0.253 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccC-CCEEEEEcCCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPF-GVKIIAAKRSWAS 178 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~af-G~~V~~~~r~~~~ 178 (189)
.++++.|||-|.+|.++|..+..+ |.+|..+.+....
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 368999999999999999999998 9999999886543
No 473
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=81.94 E-value=2.2 Score=37.61 Aligned_cols=68 Identities=21% Similarity=0.152 Sum_probs=57.3
Q ss_pred hCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCCHHHHHHHHHHcc----CCC-------
Q 044056 99 NCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFGNIGVELAKRLRP----FGV------- 167 (189)
Q Consensus 99 ~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G~IG~~vA~~l~a----fG~------- 167 (189)
+..|++.|.-- +-+|=-+++.+|+.+|- .+..|.+.++-+.|.|.-|-.+|+.+.. .|+
T Consensus 248 r~~ipvFnDDi------qGTa~V~lAgllnAlki----~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~ 317 (555)
T 1gq2_A 248 RNKYCTFNDDI------QGTASVAVAGLLAALRI----TKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIK 317 (555)
T ss_dssp TTTSEEEETTT------HHHHHHHHHHHHHHHHH----HTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHT
T ss_pred hccCCEecCcc------chHHHHHHHHHHHHHHH----hCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhC
Confidence 44799998532 66888899999999984 6789999999999999999999999987 685
Q ss_pred EEEEEcCCC
Q 044056 168 KIIAAKRSW 176 (189)
Q Consensus 168 ~V~~~~r~~ 176 (189)
+|+.+|+.+
T Consensus 318 ~i~~~D~~G 326 (555)
T 1gq2_A 318 RIWMVDSKG 326 (555)
T ss_dssp TEEEEETTE
T ss_pred cEEEEECCC
Confidence 689898753
No 474
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=81.80 E-value=1.6 Score=37.27 Aligned_cols=36 Identities=39% Similarity=0.484 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.++++.|||-|.+|.++|..+..+|.+|..+.+...
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 478999999999999999999999999999987654
No 475
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=81.79 E-value=1.3 Score=35.97 Aligned_cols=34 Identities=18% Similarity=0.055 Sum_probs=31.2
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...|.|||-|-+|..+|..|...|.+|+.+++..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4679999999999999999998999999999864
No 476
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=81.43 E-value=1.1 Score=36.52 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=27.9
Q ss_pred CCEEEEEcCC-HHHHHHHHHHccC--CCEE-EEEcCCCC
Q 044056 143 GKTVFISGFG-NIGVELAKRLRPF--GVKI-IAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G-~IG~~vA~~l~af--G~~V-~~~~r~~~ 177 (189)
-.+|||||+| .+|+..++.++.. ++++ -.+|+++.
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~ 56 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRS 56 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHH
Confidence 3689999999 8999999998876 5786 46777643
No 477
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=81.41 E-value=3.8 Score=33.46 Aligned_cols=70 Identities=11% Similarity=0.114 Sum_probs=50.2
Q ss_pred HhhCCeEEEecCC-CCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC---CHHHHHHHHHHccCCCEEEEE
Q 044056 97 LTNCAIKAARILG-DVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF---GNIGVELAKRLRPFGVKIIAA 172 (189)
Q Consensus 97 ~~~~gI~v~n~~g-~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~---G~IG~~vA~~l~afG~~V~~~ 172 (189)
+.-.+++|.|.-+ . +..++- +++=++.+.+++ ..+.|++|+++|= |++.+..+..+.-|||+|...
T Consensus 118 a~~~~vPVINag~g~---~~HPtQ--~LaDl~Ti~e~~-----g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~ 187 (308)
T 1ml4_A 118 AEVAEVPVINAGDGS---NQHPTQ--TLLDLYTIKKEF-----GRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLI 187 (308)
T ss_dssp HHTCSSCEEEEEETT---SCCHHH--HHHHHHHHHHHS-----SCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEE
T ss_pred HHhCCCCEEeCccCC---ccCcHH--HHHHHHHHHHHh-----CCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEE
Confidence 3445799999753 3 334443 333334444432 2588999999998 489999999999999999999
Q ss_pred cCCC
Q 044056 173 KRSW 176 (189)
Q Consensus 173 ~r~~ 176 (189)
.|..
T Consensus 188 ~P~~ 191 (308)
T 1ml4_A 188 SPEL 191 (308)
T ss_dssp CCGG
T ss_pred CCcc
Confidence 8854
No 478
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=81.22 E-value=1.6 Score=37.53 Aligned_cols=39 Identities=21% Similarity=0.209 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCH----------HHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 140 TLLGKTVFISGFGN----------IGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 140 ~l~gktvGIvG~G~----------IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+.|++|+|+|+-- =...+++.|...|++|.+|||....
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~ 374 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPR 374 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCH
Confidence 58999999999974 7889999999999999999998543
No 479
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=81.19 E-value=6.8 Score=32.77 Aligned_cols=70 Identities=16% Similarity=0.161 Sum_probs=49.7
Q ss_pred HhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCC--HHHHHHHHHHccCCCEEEEEcC
Q 044056 97 LTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFG--NIGVELAKRLRPFGVKIIAAKR 174 (189)
Q Consensus 97 ~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G--~IG~~vA~~l~afG~~V~~~~r 174 (189)
+.-.+|+|.|.-+. ...++--++ =++.+.++ .+ .+.|++|++||=+ ++....+..+.-|||+|....|
T Consensus 144 A~~s~vPVINa~~~---~~HPtQaLa--Dl~Ti~E~----~G-~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P 213 (365)
T 4amu_A 144 VKYSGVPVWNGLTD---DEHPTQIIA--DFMTMKEK----FG-NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGP 213 (365)
T ss_dssp HHHHCSCEEEEECS---SCCHHHHHH--HHHHHHHH----HS-SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHhCCCCEEeCCCC---CCCcHHHHH--HHHHHHHH----hC-CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECC
Confidence 34568999998654 444443332 23333332 12 4899999999988 7899999999999999999988
Q ss_pred CC
Q 044056 175 SW 176 (189)
Q Consensus 175 ~~ 176 (189)
..
T Consensus 214 ~~ 215 (365)
T 4amu_A 214 DN 215 (365)
T ss_dssp GG
T ss_pred cc
Confidence 53
No 480
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=81.02 E-value=12 Score=30.43 Aligned_cols=70 Identities=14% Similarity=0.134 Sum_probs=49.8
Q ss_pred HhhCCeEEEecC-CCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC---CHHHHHHHHHHccC-CCEEEE
Q 044056 97 LTNCAIKAARIL-GDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF---GNIGVELAKRLRPF-GVKIIA 171 (189)
Q Consensus 97 ~~~~gI~v~n~~-g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~---G~IG~~vA~~l~af-G~~V~~ 171 (189)
+.-.+|+|.|.- |. +..++-- ++=++.+.+++ ..+.|++|++||= |++....+..+.-| ||+|..
T Consensus 114 A~~~~vPVINag~g~---~~HPtQ~--LaDl~Ti~e~~-----g~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~ 183 (306)
T 4ekn_B 114 SEYSQVPIINAGDGS---NQHPTQT--LLDLYTIMREI-----GRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYF 183 (306)
T ss_dssp HHHCSSCEEESCSSS---SCCHHHH--HHHHHHHHHHH-----SCSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEE
T ss_pred HHhCCCCEEeCCCCC---CcCcHHH--HHHHHHHHHHh-----CCcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEE
Confidence 445689999984 33 3344433 33333333331 2588999999997 58999999999999 999999
Q ss_pred EcCCC
Q 044056 172 AKRSW 176 (189)
Q Consensus 172 ~~r~~ 176 (189)
..|..
T Consensus 184 ~~P~~ 188 (306)
T 4ekn_B 184 VSPKE 188 (306)
T ss_dssp ECCGG
T ss_pred ECCcc
Confidence 98853
No 481
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=80.94 E-value=1.8 Score=37.02 Aligned_cols=38 Identities=18% Similarity=0.214 Sum_probs=32.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCC-EEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGV-KIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~-~V~~~~r~~~ 177 (189)
...||+|.|||-|.+|-.+|..+..+|. +|..+.|...
T Consensus 261 ~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 261 NAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred ccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 3679999999999999999999998998 4888877643
No 482
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=80.86 E-value=1.9 Score=34.14 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=30.7
Q ss_pred CEEEEEcCCHHHHHHHHHHccC-CCEEEEEcCCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPF-GVKIIAAKRSWA 177 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~af-G~~V~~~~r~~~ 177 (189)
..|.|||-|.+|-..|..|... |.+|..+++...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 5799999999999999999987 999999998654
No 483
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=80.85 E-value=1.2 Score=37.87 Aligned_cols=35 Identities=26% Similarity=0.160 Sum_probs=32.2
Q ss_pred CCCEEEEEcCC----------HHHHHHHHHHccCCCEEEEEcCCC
Q 044056 142 LGKTVFISGFG----------NIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 142 ~gktvGIvG~G----------~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
.|++|+|+|+. .=...+++.|...|++|.+|||..
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~ 356 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNV 356 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHH
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCC
Confidence 79999999997 678999999999999999999963
No 484
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=80.85 E-value=6.1 Score=32.89 Aligned_cols=73 Identities=16% Similarity=0.132 Sum_probs=52.1
Q ss_pred hHHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcC--CHHHHHHHHHHccCCCEEEEE
Q 044056 95 DALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGF--GNIGVELAKRLRPFGVKIIAA 172 (189)
Q Consensus 95 ~~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~--G~IG~~vA~~l~afG~~V~~~ 172 (189)
..+...+|+|.|.-|. +..++- +++=++.+.++ ..+..+.|++|++||= +++.+..+..+.-||++|...
T Consensus 141 ~la~~s~vPVING~g~---~~HPtQ--aL~Dl~Ti~e~---~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~ 212 (358)
T 4h31_A 141 ELGAFAGVPVWNGLTD---EFHPTQ--ILADFLTMLEH---SQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLV 212 (358)
T ss_dssp HHHHHSSSCEEESCCS---SCCHHH--HHHHHHHHHHT---TTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred HhhhhccCceECCCCc---CCCchH--HHHHHHHHHHH---hcCCCcCceEEEecCCCCcccchHHHHHHHhcCceEEEe
Confidence 3345578999994443 434443 33444444443 2345789999999995 489999999999999999999
Q ss_pred cCC
Q 044056 173 KRS 175 (189)
Q Consensus 173 ~r~ 175 (189)
.|.
T Consensus 213 ~P~ 215 (358)
T 4h31_A 213 GPQ 215 (358)
T ss_dssp SCG
T ss_pred CCc
Confidence 874
No 485
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=80.74 E-value=7.6 Score=31.87 Aligned_cols=71 Identities=24% Similarity=0.155 Sum_probs=50.0
Q ss_pred HhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCCCCCCCCCCCCEEEEEcCC-HHHHHHHHHHccCCCEEEEEcCC
Q 044056 97 LTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHIVPTGETLLGKTVFISGFG-NIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 97 ~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~~~~~~~l~gktvGIvG~G-~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
+.-.+++|.|.-+. +..++--++ =++.+.+++ ..+.|++|++||=| ++.+..+..+.-|||+|....|.
T Consensus 119 A~~~~vPVINa~~~---~~HPtQaLa--Dl~Ti~e~~-----g~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~ 188 (321)
T 1oth_A 119 AKEASIPIINGLSD---LYHPIQILA--DYLTLQEHY-----SSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPK 188 (321)
T ss_dssp HHHCSSCEEESCCS---SCCHHHHHH--HHHHHHHHH-----SCCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCT
T ss_pred HHhCCCCEEcCCCC---CCCcHHHHH--HHHHHHHHh-----CCcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCc
Confidence 34457999997654 555554333 333333431 25899999999985 58888888888999999999986
Q ss_pred CC
Q 044056 176 WA 177 (189)
Q Consensus 176 ~~ 177 (189)
.-
T Consensus 189 ~~ 190 (321)
T 1oth_A 189 GY 190 (321)
T ss_dssp TC
T ss_pred cc
Confidence 54
No 486
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=80.67 E-value=0.77 Score=38.85 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=27.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEE-EcC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIA-AKR 174 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~-~~r 174 (189)
.++|.|+|.|..|+++++.++.-|++|++ +|.
T Consensus 52 ~~~v~IiGAG~~G~~l~~~l~~~g~~ivgfiDd 84 (409)
T 2py6_A 52 ATRLVILGTKGFGAHLMNVRHERPCEVIAAVDD 84 (409)
T ss_dssp GCEEEEECSSSTHHHHHSCSSSCSSEEEEEECT
T ss_pred CCeEEEEeCCHHHHHHHHHHHHCCCEEEEEEeC
Confidence 36799999999999999999888999765 464
No 487
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=80.66 E-value=2.3 Score=36.31 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccC--------------------CC-EEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPF--------------------GV-KIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~af--------------------G~-~V~~~~r~~~ 177 (189)
.+.+++|.|||-|.+|-++|..|... |. +|..+.|...
T Consensus 144 ~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 144 DLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 45799999999999999999998864 76 8988887653
No 488
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=80.64 E-value=2.4 Score=35.62 Aligned_cols=39 Identities=15% Similarity=0.004 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCC----------HHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 140 TLLGKTVFISGFG----------NIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 140 ~l~gktvGIvG~G----------~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
.+.|++|+|+|+- .=...+++.|...|++|.+|||..++
T Consensus 306 ~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~~~~ 354 (402)
T 1dlj_A 306 ESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNK 354 (402)
T ss_dssp CCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSC
T ss_pred CCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEEEECCCCCh
Confidence 6899999999984 46789999999999999999997543
No 489
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=80.55 E-value=1.9 Score=37.67 Aligned_cols=35 Identities=26% Similarity=0.306 Sum_probs=31.8
Q ss_pred CEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCCC
Q 044056 144 KTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWAS 178 (189)
Q Consensus 144 ktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~~ 178 (189)
..|.|||.|-.|..+|..|...|.+|+.+++....
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 46999999999999999999999999999987644
No 490
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=80.42 E-value=1.5 Score=37.37 Aligned_cols=36 Identities=28% Similarity=0.218 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+.|.|||-|-.|-..|..|+..|.+|..+.+...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~ 67 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASER 67 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 357899999999999999999999999999988654
No 491
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=80.08 E-value=2.1 Score=36.57 Aligned_cols=40 Identities=15% Similarity=0.186 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCC----------HHHHHHHHHHccC-CCEEEEEcCCCCCc
Q 044056 140 TLLGKTVFISGFG----------NIGVELAKRLRPF-GVKIIAAKRSWASH 179 (189)
Q Consensus 140 ~l~gktvGIvG~G----------~IG~~vA~~l~af-G~~V~~~~r~~~~~ 179 (189)
.+.|++|+|+|+- .-...+++.|... |++|.+|||...+.
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~ 362 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD 362 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc
Confidence 4789999999984 4578999999988 99999999987653
No 492
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=80.03 E-value=2.7 Score=37.23 Aligned_cols=38 Identities=24% Similarity=0.208 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 140 TLLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 140 ~l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
+.....|.|||-|..|..+|..|...|.+|..+++...
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 34568999999999999999999999999999998743
No 493
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=79.97 E-value=2 Score=36.70 Aligned_cols=34 Identities=29% Similarity=0.354 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
..+++.|||-|.||-++|..+..+|.+|..+.+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3578999999999999999999999999988764
No 494
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=79.94 E-value=2.7 Score=37.58 Aligned_cols=34 Identities=18% Similarity=0.013 Sum_probs=31.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSW 176 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~ 176 (189)
...|.|||-|-.|..+|..|..-|.+|+.+++..
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4789999999999999999999999999999854
No 495
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=79.79 E-value=1.4 Score=34.59 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=30.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
.+.|.|||-|..|-..|..|...|.+|..+++.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 578999999999999999999999999999985
No 496
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=79.75 E-value=1.5 Score=38.11 Aligned_cols=37 Identities=30% Similarity=0.242 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 141 LLGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 141 l~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
..+++|.|||-|.+|-++|..|..+|.+|..+.+.+.
T Consensus 353 ~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 353 FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 4689999999999999999999999999999887643
No 497
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=79.56 E-value=6 Score=32.57 Aligned_cols=76 Identities=11% Similarity=0.093 Sum_probs=51.3
Q ss_pred HHhhCCeEEEecCCCCCCCchhHHHHHHHHHHHHHhcCC--CCCCCCCCCCEEEEEcCC--HHHHHHHHHHccCCCEEEE
Q 044056 96 ALTNCAIKAARILGDVSGNAASCAELSIYLMLGLLRKHI--VPTGETLLGKTVFISGFG--NIGVELAKRLRPFGVKIIA 171 (189)
Q Consensus 96 ~~~~~gI~v~n~~g~~~~~a~~vAE~~l~liL~~~R~~~--~~~~~~l~gktvGIvG~G--~IG~~vA~~l~afG~~V~~ 171 (189)
.+...+|+|.|.-+- +..++--++ =++.+.+++. ......+.|++|++||=| ++.+..+..+.-|||+|..
T Consensus 117 lA~~~~vPVINag~~---~~HPtQaLa--Dl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~ 191 (328)
T 3grf_A 117 MAQHASVPCINALDD---FGHPLQMVC--DFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHV 191 (328)
T ss_dssp HHHHCSSCEEESSCS---SCCHHHHHH--HHHHHHHHHHHTTCCTTTGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEE
T ss_pred HHHhCCCCEEeCCCC---CCCcHHHHH--HHHHHHHHhCCccccccccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEE
Confidence 344568999998653 444443322 2333333321 112236899999999986 8899999999999999999
Q ss_pred EcCCC
Q 044056 172 AKRSW 176 (189)
Q Consensus 172 ~~r~~ 176 (189)
..|..
T Consensus 192 ~~P~~ 196 (328)
T 3grf_A 192 CCPDH 196 (328)
T ss_dssp ECCSS
T ss_pred ECChH
Confidence 98854
No 498
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=79.31 E-value=1.4 Score=38.78 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCC
Q 044056 142 LGKTVFISGFGNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 142 ~gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
.+++|.|||-|.||-++|..+..+|.+|..+.+.
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 3568999999999999999999999999988875
No 499
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=79.23 E-value=1.7 Score=35.22 Aligned_cols=35 Identities=14% Similarity=-0.020 Sum_probs=31.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCCCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRSWA 177 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~~~ 177 (189)
.+.|.|||-|..|...|..|...|.+|..+++...
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 48 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQ 48 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 46899999999999999999988999999998643
No 500
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=78.87 E-value=1.7 Score=34.42 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=30.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHccCCCEEEEEcCC
Q 044056 143 GKTVFISGFGNIGVELAKRLRPFGVKIIAAKRS 175 (189)
Q Consensus 143 gktvGIvG~G~IG~~vA~~l~afG~~V~~~~r~ 175 (189)
...|.|||.|..|...|..|...|.+|..+++.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 367999999999999999999999999999984
Done!