Query 044059
Match_columns 223
No_of_seqs 161 out of 668
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 19:19:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ahn_A Thaumatin-like protein; 100.0 9E-94 3.1E-98 618.2 17.6 219 2-221 1-222 (222)
2 1du5_A Zeamatin; beta sandwich 100.0 5.3E-88 1.8E-92 576.1 12.4 203 2-221 1-206 (206)
3 2vhk_A Thaumatin-I; kinetics o 100.0 5.3E-87 1.8E-91 569.6 14.2 204 2-222 1-206 (206)
4 1aun_A PR-5D; antifungal prote 100.0 1.1E-86 3.8E-91 568.6 16.0 204 1-223 1-208 (208)
5 1z3q_A Thaumatin-like protein; 100.0 3.3E-86 1.1E-90 562.5 15.7 198 2-221 1-200 (200)
6 3g7m_A Xylanase inhibitor TL-X 100.0 3.1E-56 1.1E-60 363.5 13.4 147 2-221 1-151 (151)
7 3gd0_A Laminaripentaose-produc 92.7 0.13 4.3E-06 47.0 5.2 108 3-122 8-147 (367)
8 4aor_D Trypsin inhibitor 3; hy 76.2 0.79 2.7E-05 27.8 0.7 14 160-173 11-24 (37)
9 3gd0_A Laminaripentaose-produc 73.0 2.8 9.7E-05 38.1 4.0 39 183-221 321-365 (367)
10 4ajy_V VON hippel-lindau disea 55.0 8.3 0.00028 31.2 3.1 46 2-53 22-67 (163)
11 1lm8_V VHL, VON hippel-lindau 44.8 17 0.00059 29.2 3.4 46 2-53 19-64 (160)
12 1ok0_A Tendamistat, alpha-amyl 36.8 53 0.0018 22.9 4.4 36 5-43 22-57 (74)
13 2hrv_A 2A cysteine proteinase; 35.4 9.5 0.00033 30.2 0.5 18 64-81 97-114 (142)
14 1z8r_A Coxsackievirus B4 polyp 33.7 11 0.00039 30.5 0.7 18 64-81 117-134 (166)
15 2xx6_A SPBC2 prophage-derived 28.2 45 0.0015 25.8 3.3 30 30-59 30-65 (142)
16 3fz2_A Minor tail protein U; m 23.1 21 0.00072 27.9 0.5 26 194-219 107-132 (134)
17 2ker_A Parvulustat, alpha-amyl 22.1 98 0.0033 21.8 3.7 36 5-43 20-55 (78)
18 2qxx_A DCTP deaminase, deoxycy 21.7 66 0.0022 25.9 3.3 30 29-58 69-104 (190)
19 3lqw_A Deoxyuridine 5'-triphos 20.5 61 0.0021 25.8 2.8 30 30-59 54-89 (163)
20 3c2t_A Deoxyuridine triphospha 20.4 48 0.0016 25.5 2.1 30 30-59 32-67 (141)
No 1
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium}
Probab=100.00 E-value=9e-94 Score=618.23 Aligned_cols=219 Identities=46% Similarity=0.945 Sum_probs=211.7
Q ss_pred cEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCCCceeEeeecccccCCCCCcCCcCcccC-cccccC
Q 044059 2 AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCS-AQLHCQ 80 (223)
Q Consensus 2 ~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriW~RtgCs~d~~g~~~C~TGdC~-g~l~C~ 80 (223)
++|||+|+|+|||||++++++|++++..+||+|+||++++|.||++|+|||||||+|+||++|+++|+||||+ |.|+|+
T Consensus 1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~ 80 (222)
T 2ahn_A 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN 80 (222)
T ss_dssp CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCCcceEEEEecCCCCCCceeeeecccccCCCceeccCCCCCCCCCccccccccccCCCCceeec-CCeEEeccch
Q 044059 81 GTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKV-GGKVVGCKSA 159 (223)
Q Consensus 81 g~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~~-~g~vv~C~Sa 159 (223)
+.+++||+|||||+|++. +++|||||||||||||||+|+|+++++.|+.++|.+|||..||.||||++ +|+|||||||
T Consensus 81 g~~g~pPaTLaEftl~~~-~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~sa 159 (222)
T 2ahn_A 81 GNGAIPPATLAEFNIPAG-GGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSA 159 (222)
T ss_dssp TCCCCSSCCEEEEEECST-TCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCH
T ss_pred CCCCCCCceeeeEEecCC-CCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEeccccc
Confidence 988899999999999976 67999999999999999999998866789999999999999999999964 6899999999
Q ss_pred hhccCCCccccCCCCCCCCCCCCchhHHHHHhhCCCccccccCCCCCceeecC-CCeEEEecC
Q 044059 160 CLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRA-SRYVITFCP 221 (223)
Q Consensus 160 C~a~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~-~~y~vtFCP 221 (223)
|.||++|||||+|+|++|++|+|+.||++||++||+||||||||++|||+|++ ++|+|||||
T Consensus 160 C~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 160 CVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp HHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred ccccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999998 799999998
No 2
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1
Probab=100.00 E-value=5.3e-88 Score=576.06 Aligned_cols=203 Identities=43% Similarity=0.918 Sum_probs=192.9
Q ss_pred cEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCC-CceeEeeecccccCCCCCcCCcCcccCcccccC
Q 044059 2 AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEK-WSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQ 80 (223)
Q Consensus 2 ~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~-WsGriW~RtgCs~d~~g~~~C~TGdC~g~l~C~ 80 (223)
++|||+|+|+||||||+++. .+||+|+||++++|+||++ |+|||||||+|+||++|+++|+||||+|.|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~p~-------~gG~~L~~G~s~s~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~ 73 (206)
T 1du5_A 1 AVFTVVNQCPFTVWAASVPV-------GGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCT 73 (206)
T ss_dssp CEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEECSEEECTTSBEEESSSCCTTBSSCC
T ss_pred CEEEEEeCCCCCcCCeEecC-------CCCEecCCCCeEEEECCCCCcccceecccccCCCCCCCccccccCCCCeeecC
Confidence 58999999999999999873 4699999999999999998 999999999999999999999999999999999
Q ss_pred CCCCCCCcceEEEEecCCCCCCceeeeecccccCCCceeccCCCCCCC-CCccccccccccCCCCceeecCCeEEeccch
Q 044059 81 GTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGC-GVASCDADLNICCPSALEVKVGGKVVGCKSA 159 (223)
Q Consensus 81 g~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C-~~~~C~~dln~~CP~~l~v~~~g~vv~C~Sa 159 (223)
+ +++||+|||||+|++. +++|||||||||||||||+|+|++++ .| +.++|.+|||..||.||||+ +|||||
T Consensus 74 g-~g~pPaTLaEftl~~~-~~~dfYDVSlVDGfNlPm~i~P~~g~-~C~~~~~C~~dln~~CP~~L~v~-----~gC~sa 145 (206)
T 1du5_A 74 G-YGRAPNTLAEYALKQF-NNLDFFDISLIDGFNVPMSFLPDGGS-GCSRGPRCAVDVNARCPAELRQD-----GVCNNA 145 (206)
T ss_dssp S-CCCSSCCEEEEEEEEG-GGEEEEEEECTTCBCSCEEEEECSSS-SCCCCCEECSCTTTTCCGGGEET-----TEECCH
T ss_pred C-CCCCcceeeEEEeccC-CCCceeeeeeecccccCEEEecCCCC-CCcCCCcccccchhhCCHHHhhc-----cccCCh
Confidence 9 7789999999999975 57999999999999999999998643 69 99999999999999999994 599999
Q ss_pred hhccCCCccccCCCCCCCCCCCCchhHHHHHhhCCCccccccCCCCCceeecC-CCeEEEecC
Q 044059 160 CLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRA-SRYVITFCP 221 (223)
Q Consensus 160 C~a~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~-~~y~vtFCP 221 (223)
|.+|++|||||+|+|.+ +|+|+.||++||++||+||||||||++|||+|++ ++|+|||||
T Consensus 146 C~~f~~~~yCC~g~~~~--~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~vtFCP 206 (206)
T 1du5_A 146 CPVFKKDEYCCVGSAAN--DCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206 (206)
T ss_dssp HHHHCCHHHHCCGGGGG--GCCCCHHHHHHHHHCTTSBSSTTCHHHHCEEEETTCCEEEEECC
T ss_pred hhccCCCcccccCCCCC--cCCcchHHHHHHhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 99999999999999987 9999999999999999999999999999999998 899999998
No 3
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ...
Probab=100.00 E-value=5.3e-87 Score=569.59 Aligned_cols=204 Identities=38% Similarity=0.857 Sum_probs=191.7
Q ss_pred cEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCC-CceeEeeecccccCCCCCcCCcCcccCcccccC
Q 044059 2 AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEK-WSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQ 80 (223)
Q Consensus 2 ~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~-WsGriW~RtgCs~d~~g~~~C~TGdC~g~l~C~ 80 (223)
++|||+|+|+||||||++++ ++.++.+||+|+||++++|.||++ |+|||||||+|+||+.|+++|+||||+|.|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~~g--~~~l~~gG~~L~~G~s~~~~vp~~~wsGRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~ 78 (206)
T 2vhk_A 1 ATFEIVNRCSYTVWAAASKG--DAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCK 78 (206)
T ss_dssp CEEEEEECSSSCEEEEEECS--SSEEEEEEEEECTTCEEEEECCTTCCSEEEEEEBSCEECTTSBEECSBSCCTTBSSCS
T ss_pred CEEEEEeCCCCCcCCEEcCC--CCcCCCCCeecCCCCEEEEECCCCCcccceeccccCCCCCCCCcccccCCCCceeecC
Confidence 58999999999999999874 466668899999999999999998 999999999999999999999999999999999
Q ss_pred CCCCCCCcceEEEEecCCCCCCceeeeecccccCCCceeccCCCCCCCCCccccccccccCCCCceeecCCeEEeccchh
Q 044059 81 GTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSAC 160 (223)
Q Consensus 81 g~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~~~g~vv~C~SaC 160 (223)
+ +++||+|||||+|++. ++ |||||||||||||||+|+|+++ .|+.++|.+|||..||+||||.. +||||||
T Consensus 79 g-~g~pPaTLaEftl~~~-~~-dfYDVSlVDGfNlP~~i~p~~g--~C~~~~C~~dln~~CP~eL~v~~----~~C~saC 149 (206)
T 2vhk_A 79 R-FGRPPTTLAEFSLNQY-GK-DYIDISNIKGFNVPMNFSPTTR--GCRGVRCAADIVGQCPAKLKAPG----GGCNDAC 149 (206)
T ss_dssp S-CCCSSCCEEEEEEEET-TE-EEEEEECTTCBSSCEEEEESSS--SCCCEEECSCHHHHCCGGGBCTT----SSBCCHH
T ss_pred C-CCCCCcceEEEEeccC-CC-ceeeeeccCCccCCEEeeeCCC--CCCccccccchhhhCCHHHeecc----ccccChh
Confidence 9 6789999999999975 45 9999999999999999999864 79999999999999999999952 4999999
Q ss_pred hccCCCccccCCCCCCCCCCCCchhHHHHHhhCCCccccccCCCCCceeecC-CCeEEEecCC
Q 044059 161 LAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRA-SRYVITFCPP 222 (223)
Q Consensus 161 ~a~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~-~~y~vtFCP~ 222 (223)
.+|++|||||+| ++|+|+.||++||++||+||||||||++| |+|++ ++|+|||||+
T Consensus 150 ~af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~Dd~ts-ftC~~~~~Y~VtFCP~ 206 (206)
T 2vhk_A 150 TVFQTSEYCCTT-----GKCGPTEYSRFFKRLCPDAFSYVLDKPTT-VTCPGSSNYRVTFCPT 206 (206)
T ss_dssp HHHCCHHHHTTT-----SCCCCCHHHHHHHHHCTTSBCSTTSCCCC-EEEETTCCEEEEESCC
T ss_pred hccCCCcccccC-----CCCCcchhHHHHHhhCcccccCCCCCCCc-eecCCCCCEEEEeCCC
Confidence 999999999999 69999999999999999999999999999 99998 8999999995
No 4
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A
Probab=100.00 E-value=1.1e-86 Score=568.60 Aligned_cols=204 Identities=40% Similarity=0.833 Sum_probs=191.8
Q ss_pred CcEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCCCc-eeEeeecccccCCCCCcCCcCcccCccccc
Q 044059 1 GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWS-GRIWGRQGCRFDSNGKGSCDTGDCSAQLHC 79 (223)
Q Consensus 1 a~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~Ws-GriW~RtgCs~d~~g~~~C~TGdC~g~l~C 79 (223)
+++|||+|+|+|||||++++. .+||+|+|||+++|+||++|+ |||||||+|+||++|+++|+||||+|.|+|
T Consensus 1 ~~t~ti~N~C~~tVWp~~~p~-------~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C 73 (208)
T 1aun_A 1 SGVFEVHNNCPYTVWAAATPV-------GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLEC 73 (208)
T ss_dssp CCEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSC
T ss_pred CcEEEEEeCCCCCcCCeEecC-------CCCeeCCCCCeEEEECCCCCcccceecccccCCCCCCCcccccCCcCceeec
Confidence 689999999999999999873 468999999999999999996 999999999999999999999999999999
Q ss_pred CCCCCCCCcceEEEEecCCCCCCceeeeecccccCCCceeccCC-CCCCCCCccccccccccCCCCceeecCCeEEeccc
Q 044059 80 QGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVG-GGIGCGVASCDADLNICCPSALEVKVGGKVVGCKS 158 (223)
Q Consensus 80 ~g~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~-g~~~C~~~~C~~dln~~CP~~l~v~~~g~vv~C~S 158 (223)
++ +++||+|||||+|++. +++|||||||||||||||+|+|++ +++.|+.++|.+|||..||.||||+ +||||
T Consensus 74 ~g-~g~pPaTLaEftl~~~-~~~dfYDVSlVDGfNlP~~i~P~~~g~g~C~~~~C~~dln~~CP~~L~v~-----~~C~s 146 (208)
T 1aun_A 74 KG-WGKPPNTLAEYALNQF-SNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVP-----GGCNN 146 (208)
T ss_dssp SS-CCCSSCCEEEEEEEEG-GGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEET-----TEECC
T ss_pred CC-CCCCCcceEEEEecCC-CCCceeeeecccCcccCeeeeeCCCCCCCCCcccccCcchhhCCHHHccc-----ccccC
Confidence 99 6789999999999975 579999999999999999999986 3468999999999999999999994 38999
Q ss_pred hhhccCCCccccCCCCCCCCCCCCchhHHHHHhhCCCccccccCCCCCceeecC--CCeEEEecCCC
Q 044059 159 ACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRA--SRYVITFCPPK 223 (223)
Q Consensus 159 aC~a~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~--~~y~vtFCP~~ 223 (223)
||.+|++|||||+| ++|+|++||++||++||+||||||||++|||+|++ ++|+|||||+.
T Consensus 147 aC~af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~~y~vtFCP~g 208 (208)
T 1aun_A 147 PCTTFGGQQYCCTQ-----GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG 208 (208)
T ss_dssp HHHHTCSHHHHCTT-----SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred HhhhcCCCcccccC-----CCCCcchHHHHHHhcCcccccCCCCCCCcCeECCCCCCCEEEEeCCCC
Confidence 99999999999999 68999999999999999999999999999999986 79999999974
No 5
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata}
Probab=100.00 E-value=3.3e-86 Score=562.46 Aligned_cols=198 Identities=41% Similarity=0.953 Sum_probs=187.9
Q ss_pred cEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCCCc-eeEeeecccccCCCCCcCCcCcccCcccccC
Q 044059 2 AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWS-GRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQ 80 (223)
Q Consensus 2 ~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~Ws-GriW~RtgCs~d~~g~~~C~TGdC~g~l~C~ 80 (223)
++|||+|+|+||||||+++ .+||+|+|||+++|+||++|+ |||||||+|+||++|+++|+||||+|.|+|+
T Consensus 1 ~t~ti~N~C~~tVWp~~~p--------~gG~~L~~G~s~~~~~p~~w~~GRiWgRTgC~fd~~g~~~C~TGdCgg~l~C~ 72 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVP--------GGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRCQTGDCGGVLSCT 72 (200)
T ss_dssp CEEEEEECSSSCEEEEEET--------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCS
T ss_pred CEEEEEeCCCCCeeceEeC--------CCCcccCCCCeEEEeCCCcccccceeccccCCCCCCCCccccccCcCCeeecC
Confidence 5899999999999999964 469999999999999999995 9999999999999999999999999999999
Q ss_pred CCCCCCCcceEEEEecCCCCCCceeeeecccccCCCceeccCCCCCCCCCccccccccccCCCCceeecCCeEEeccchh
Q 044059 81 GTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSAC 160 (223)
Q Consensus 81 g~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~~~g~vv~C~SaC 160 (223)
+ +++||+|||||+|++. +++|||||||||||||||+|+|+++ .|+.++|.+|||..||.||||. .||+|||
T Consensus 73 g-~g~pPaTLaEftL~~~-~~~dfYDVSlVDGfNlP~~i~P~~g--~C~~~~C~~dln~~CP~~L~v~-----~gC~saC 143 (200)
T 1z3q_A 73 A-YGNPPNTLAEFALNQF-NNLDFFDISLVDGFNVPMDFSPTSG--GCRGIRCAADINGQCPGALKAP-----GGCNNPC 143 (200)
T ss_dssp S-CCCSSCCEEEEEEEET-TTEEEEEEECTTCBSSCEEEEESSS--SSCCEEECSCHHHHCCTTTEET-----TEECCHH
T ss_pred C-CCCCCcceEEEEecCC-CCCceeeeeeeccccCCeeeeeCCC--CCCccccccchhhhCCHHHccc-----CcccCcc
Confidence 9 5679999999999976 6799999999999999999999864 7999999999999999999994 2899999
Q ss_pred hccCCCccccCCCCCCCCCCCCchhHHHHHhhCCCccccccCCCCCceeecC-CCeEEEecC
Q 044059 161 LAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRA-SRYVITFCP 221 (223)
Q Consensus 161 ~a~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~-~~y~vtFCP 221 (223)
.+|++|||||+| ++|+|+.||++||++||+||||||||++|||+|++ ++|+|||||
T Consensus 144 ~af~~~~yCC~g-----~~C~pt~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 144 TVFKTDQYCCNS-----GACSPTDYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp HHHCCHHHHCTT-----SCCCCCHHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred cccCCCcccCCC-----CCCCchhHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 999999999999 69999999999999999999999999999999997 899999998
No 6
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum}
Probab=100.00 E-value=3.1e-56 Score=363.53 Aligned_cols=147 Identities=38% Similarity=0.746 Sum_probs=129.5
Q ss_pred cEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCCCceeEeeecccccCCCCCcCCcCccc-CcccccC
Q 044059 2 AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDC-SAQLHCQ 80 (223)
Q Consensus 2 ~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriW~RtgCs~d~~g~~~C~TGdC-~g~l~C~ 80 (223)
++|||+|||+||||||+++. . .+..+||+|+||++++|.||++|+|||||||+|+||+.|+++|+|||| +|+|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~~~-~--~p~~gG~~L~~g~s~~~~~p~~wsGRiWgRTgC~fd~~g~~~C~TGdCg~g~l~C~ 77 (151)
T 3g7m_A 1 APLTITNRCHFTVWPAVALV-L--AQGGGGTELHPGASWSLDTPVIGSQYIWGRTGCSFDRAGKGRCQTGDCGGSSLTCG 77 (151)
T ss_dssp CCEEEEECSSSCEEEEEEET-T--SSCCEECCBCTTCEEEECCCSSEEEEEEEEESCEECSSCCEECSBSCSSTTSCCSC
T ss_pred CEEEEEeCCCCCccCeeccC-C--CCCCCCeEcCCCCeEEEECCCCCcceeecccCCCCCCCCCcccccCCccCCccccc
Confidence 58999999999999999864 1 235789999999999999999999999999999999999999999999 7999999
Q ss_pred CCCCCCCcceEEEEecCCCCCCceeeeecc-cccCCCceeccCCCCCCCCCccccccccccCCCCceeecCCeEEeccch
Q 044059 81 GTGGAPPATVVEMTLGSSASPLHFYDVSLV-DGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSA 159 (223)
Q Consensus 81 g~g~~ppaTlaEftl~~~~~~~d~YDVSlV-dG~NlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~~~g~vv~C~Sa 159 (223)
+ +++||+|||||+|++ ++|||||||| |||||||+|+|+++.. .-|.+
T Consensus 78 ~-~g~pPaTlaEftl~~---~~d~YDVSlV~dG~NlP~~i~P~~g~~---------------------------~~C~~- 125 (151)
T 3g7m_A 78 G-NPAVPTTMAEVSVLQ---GNYTYGVTSTLKGFNVPMNLKCSSGDA---------------------------LPCRK- 125 (151)
T ss_dssp S-CCCSSCCEEEEEECS---SEEEEEEESSSSCCSSCEEEEESSSCC---------------------------EEECS-
T ss_pred C-CCCCCceeEEEEccC---CCceEEEEeccCCCCCCeEEEeCCCCc---------------------------CcCCC-
Confidence 7 457999999999974 6899999999 9999999999987520 12333
Q ss_pred hhccCCCccccCCCCCCCCCCCCchhHHHHHhhCCCccccccCCCCCceeecC-CC-eEEEecC
Q 044059 160 CLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRA-SR-YVITFCP 221 (223)
Q Consensus 160 C~a~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~-~~-y~vtFCP 221 (223)
..||+||.|+ +.|+. .+ |.|||||
T Consensus 126 -------------------------------~gC~dAy~~p-------~aC~~~~~~~~vtFCp 151 (151)
T 3g7m_A 126 -------------------------------AGCDVVQPYA-------KSCSAAGSRLQIVFCP 151 (151)
T ss_dssp -------------------------------TTCCSSSCCE-------EEEECTTCCEEEEECC
T ss_pred -------------------------------CCCCccccCC-------CcCCCCCCceEEEeCC
Confidence 3699999888 79999 66 9999998
No 7
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=92.67 E-value=0.13 Score=47.03 Aligned_cols=108 Identities=23% Similarity=0.317 Sum_probs=63.7
Q ss_pred EEEEEeCCCC--cccceeecC---CC---------C---------CC--CCCCceeec-CCCeEEEecCCCCceeEeeec
Q 044059 3 QLIVVNNCQE--NLWPGILGG---AG---------H---------PT--PNNGGFKLS-SGEEVVLDVPEKWSGRIWGRQ 56 (223)
Q Consensus 3 t~tv~N~C~~--tVwp~~~~~---~g---------~---------~~--~~~~g~~L~-~G~s~s~~vp~~WsGriW~Rt 56 (223)
.|+|+||-.. +||..+++. .| + ++ ...-.+.|. +|++++|.||. .+||||=-.
T Consensus 8 pl~l~Nns~~~~~Vy~yi~G~d~~~g~~~~v~~dG~~~p~~~~~~~~~~~~d~aI~l~~~G~s~ti~iP~-~sGRIyfS~ 86 (367)
T 3gd0_A 8 PLTITNNSGRAEQIHIYNLGTELSSGRQGWADASGAFHPWPAGGNPPTPAPDASIPGPAPGRSTTIQIPK-FSGRIYFSY 86 (367)
T ss_dssp EEEEEECSCCCSCEEEEEEEEETTTCCEEEECTTCCEEECCCCCSSCEECCCCCEECCCTTCEEEEEEES-EEEEEEEEE
T ss_pred eEEEEeCCCCCCcEEEEEEeEeCCCCcEEEEeCCCcEecCCcccCCCCCCcceeEECCCCCCceEEEccC-cCceEEEEc
Confidence 5899999974 699776532 11 1 00 011134564 77899999998 799999322
Q ss_pred ccccCCCCCcCCcCcccCcccccCC-CC-CCC----CcceEEEEecCCCCCCceeeeecccccCCCceeccC
Q 044059 57 GCRFDSNGKGSCDTGDCSAQLHCQG-TG-GAP----PATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPV 122 (223)
Q Consensus 57 gCs~d~~g~~~C~TGdC~g~l~C~g-~g-~~p----paTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~ 122 (223)
| ..-.|.=..+ | +.=.. .. .-| --.-+|||++. ..-|-++|.||-|.+||.|+-.
T Consensus 87 g----~~L~f~~~~~---g-lv~Ps~~NpsDPN~~~~~~f~EfT~n~---~gl~~N~S~VD~~~~Pl~l~l~ 147 (367)
T 3gd0_A 87 G----RKMEFRLTTG---G-LVQPAVQNPTDPNRDILFNWSEYTLND---SGLWINSTQVDMFSAPYTVGVR 147 (367)
T ss_dssp S----SCCCCEEETT---E-ECCCCTTSTTCTTTTSCEEEEEEEEET---TEEEEECCCSSEECSCEEEEEE
T ss_pred C----CccEEEecCC---C-ccCCCCCCCCCCCCCceeeEEEEEecC---cceecccceeccccCceEEEEE
Confidence 2 0011111111 1 11111 00 011 12458999996 3678999999999999999644
No 8
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=76.17 E-value=0.79 Score=27.77 Aligned_cols=14 Identities=29% Similarity=0.990 Sum_probs=12.0
Q ss_pred hhccCCCccccCCC
Q 044059 160 CLAMQSAKYCCTGQ 173 (223)
Q Consensus 160 C~a~~~~~~CC~g~ 173 (223)
|..|+.++|||+|.
T Consensus 11 c~~f~~p~~ccsg~ 24 (37)
T 4aor_D 11 CSGFGPPEQCCSGA 24 (37)
T ss_dssp ECTTSCGGGBTTSC
T ss_pred cCCCCCcccccccc
Confidence 56689999999986
No 9
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=73.01 E-value=2.8 Score=38.10 Aligned_cols=39 Identities=33% Similarity=0.468 Sum_probs=29.8
Q ss_pred chhHHHHHhhCC--CccccccCCC---CCceeecC-CCeEEEecC
Q 044059 183 TLFANLFKAICP--KAYSYAFDDS---SSLNKCRA-SRYVITFCP 221 (223)
Q Consensus 183 t~ys~~fK~~CP--~AYsya~Dd~---tstftC~~-~~y~vtFCP 221 (223)
+.|++++++.=. .||.|||||- +++..-.. ...+||+-|
T Consensus 321 NhYar~vH~~~~dg~~YaF~YDDV~~qs~~v~~~~P~~ltitl~~ 365 (367)
T 3gd0_A 321 NHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGDPRGASLTLDP 365 (367)
T ss_dssp CHHHHHHHHHBTTSCCCCSTTTTTTTCSCEEEESSCSEEEEEECC
T ss_pred cHHHHHHHHhccCCCeeeCCccCCCCccccccCCCCCEEEEEEcC
Confidence 579999999865 6899999974 45555555 778888755
No 10
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=55.04 E-value=8.3 Score=31.20 Aligned_cols=46 Identities=26% Similarity=0.496 Sum_probs=35.2
Q ss_pred cEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCCCceeEe
Q 044059 2 AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIW 53 (223)
Q Consensus 2 ~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriW 53 (223)
+.++|+|+++.+|-+-|..-.|.+..- ..|+||+.+.+.. |.+..|
T Consensus 22 ~~V~FvN~s~~~V~v~WIDy~G~~~~Y---~tL~PG~~~~~~T---Y~tHpW 67 (163)
T 4ajy_V 22 SQVIFCNRSPRVVLPVWLNFDGEPQPY---PTLPPGTGRRIHS---YRGHLW 67 (163)
T ss_dssp EEEEEEECSSSCEEEEEECTTSCEEEC---CCBCTTEEEEEEE---ETTCEE
T ss_pred EEEEEEeCCCCeEEEEEECCCCCEEEe---eeeCCCCeEEecC---CCCCcE
Confidence 579999999999999998877765432 2799999888773 445555
No 11
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=44.82 E-value=17 Score=29.21 Aligned_cols=46 Identities=26% Similarity=0.496 Sum_probs=34.5
Q ss_pred cEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCCCceeEe
Q 044059 2 AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIW 53 (223)
Q Consensus 2 ~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriW 53 (223)
+.|+|+|+.+.+|-+-+..-.|.+..- ..|+||+.+.+.. +.+..|
T Consensus 19 ~~V~FvN~s~~~V~v~WIDy~G~~v~Y---~~L~PG~~~~q~T---Y~tHpW 64 (160)
T 1lm8_V 19 SQVIFCNRSPRVVLPVWLNFDGEPQPY---PTLPPGTGRRIHS---YRGHLW 64 (160)
T ss_dssp EEEEEEECSSSCEEEEEECTTSCEEEC---CCBCTTEEEEEEE---ETTCEE
T ss_pred EEEEEEeCCCCeEEEEEECCCCCEEEe---eeeCCCCEEeCCC---cCCCcE
Confidence 579999999999999998876765432 2499999888763 344555
No 12
>1ok0_A Tendamistat, alpha-amylase inhibitor HOE-467A; 0.93A {Streptomyces tendae} SCOP: b.5.1.1 PDB: 1bvn_T 1hoe_A 2ait_A 3ait_A 4ait_A
Probab=36.80 E-value=53 Score=22.92 Aligned_cols=36 Identities=11% Similarity=0.163 Sum_probs=25.9
Q ss_pred EEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEe
Q 044059 5 IVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLD 43 (223)
Q Consensus 5 tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~ 43 (223)
.+.|.|+.+|-+-+.=..|... --..+.||+-.+|-
T Consensus 22 ~V~N~Cs~tvsVtV~Y~dG~~~---PCrv~~PG~~~Tfg 57 (74)
T 1ok0_A 22 QADNGCAETVTVKVVYEDDTEG---LCYAVAPGQITTVG 57 (74)
T ss_dssp EEEECSSSCEEEEEEETTSCBC---CCEEECTTCEEEEE
T ss_pred eecCCCcccEEEEEEEeCCCcc---eeEEeCCCceEEec
Confidence 5789999998887754444322 24789999987775
No 13
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=35.40 E-value=9.5 Score=30.19 Aligned_cols=18 Identities=44% Similarity=1.258 Sum_probs=15.6
Q ss_pred CCcCCcCcccCcccccCC
Q 044059 64 GKGSCDTGDCSAQLHCQG 81 (223)
Q Consensus 64 g~~~C~TGdC~g~l~C~g 81 (223)
|.+.|+-|||||.|.|..
T Consensus 97 g~G~~epGDCGG~L~C~H 114 (142)
T 2hrv_A 97 GEGPCEPGDCGGKLLCKH 114 (142)
T ss_dssp EECCCCTTCTTCEEEETT
T ss_pred EEcCCCCCCCCceeeeCC
Confidence 457899999999999984
No 14
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=33.65 E-value=11 Score=30.47 Aligned_cols=18 Identities=28% Similarity=0.639 Sum_probs=15.7
Q ss_pred CCcCCcCcccCcccccCC
Q 044059 64 GKGSCDTGDCSAQLHCQG 81 (223)
Q Consensus 64 g~~~C~TGdC~g~l~C~g 81 (223)
|.+.|+-|||||.|.|..
T Consensus 117 ~~G~~epGDCGG~L~C~H 134 (166)
T 1z8r_A 117 ATGFSEPGDAGGILRCEH 134 (166)
T ss_dssp EECSSSCCCCBSEEECSS
T ss_pred EecCCCCCCCCceeeeCC
Confidence 457899999999999984
No 15
>2xx6_A SPBC2 prophage-derived deoxyuridine 5'-triphospha nucleotidohydrolase YOSS; 1.74A {Bacillus subtilis} PDB: 2baz_A 2xy3_A* 2y1t_A* 2xcd_A 2xce_A*
Probab=28.22 E-value=45 Score=25.81 Aligned_cols=30 Identities=13% Similarity=0.278 Sum_probs=23.7
Q ss_pred CceeecCCCeE------EEecCCCCceeEeeecccc
Q 044059 30 GGFKLSSGEEV------VLDVPEKWSGRIWGRQGCR 59 (223)
Q Consensus 30 ~g~~L~~G~s~------s~~vp~~WsGriW~RtgCs 59 (223)
..+.|.||+.. .+.+|+++.|+|.+|.+-.
T Consensus 30 ~~~~i~Pg~~~lv~Tg~~i~iP~g~~~~i~pRSgla 65 (142)
T 2xx6_A 30 EDVAIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTY 65 (142)
T ss_dssp SCEEECTTCEEEEECCEEEECCTTEEEEEEECTTHH
T ss_pred CCeEECCCCEEEEEcCEEEECCCCeEEEEEeCCCcc
Confidence 34788999864 5668999999999997653
No 16
>3fz2_A Minor tail protein U; mixed alpha-beta fold, viral protein; 2.70A {Enterobacteria phage lambda} SCOP: d.323.1.1 PDB: 3fzb_A 1z1z_A
Probab=23.06 E-value=21 Score=27.92 Aligned_cols=26 Identities=35% Similarity=0.575 Sum_probs=22.1
Q ss_pred CCccccccCCCCCceeecCCCeEEEe
Q 044059 194 PKAYSYAFDDSSSLNKCRASRYVITF 219 (223)
Q Consensus 194 P~AYsya~Dd~tstftC~~~~y~vtF 219 (223)
+..|.|.+|+..+++.=..-.|.||+
T Consensus 107 ~~gydY~rD~e~~tW~~adl~y~ItY 132 (134)
T 3fz2_A 107 ASGYDYRRDDDAGLWSSADLTYVITY 132 (134)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEE
T ss_pred ccCCCCCccchhcceeeEEEEEEEEE
Confidence 68999999999988886667888875
No 17
>2ker_A Parvulustat, alpha-amylase inhibitor Z-2685; parvulustat (Z-2685), hydrolase inhibitor; NMR {Streptomyces parvulus}
Probab=22.10 E-value=98 Score=21.79 Aligned_cols=36 Identities=14% Similarity=0.068 Sum_probs=25.5
Q ss_pred EEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEe
Q 044059 5 IVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLD 43 (223)
Q Consensus 5 tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~ 43 (223)
.+.|.|+.++-+-+.=..|... --..|.||+-.+|.
T Consensus 20 ~v~N~Cs~tvsVtV~Y~dG~~~---PCrv~~PG~~~Tf~ 55 (78)
T 2ker_A 20 DVHNGCADAVSVTVEYTHGQWA---PCRVIEPGGWATFA 55 (78)
T ss_dssp EEECCSSSCEEEEEEESSCCSC---CCEEECTTCCCEEE
T ss_pred eeeCCCcccEEEEEEEeCCCcc---eeEEeCCCCEEEec
Confidence 5789999998877654444322 24789999977764
No 18
>2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis} PDB: 2qlp_A*
Probab=21.73 E-value=66 Score=25.93 Aligned_cols=30 Identities=30% Similarity=0.584 Sum_probs=24.3
Q ss_pred CCceeecCCCeE------EEecCCCCceeEeeeccc
Q 044059 29 NGGFKLSSGEEV------VLDVPEKWSGRIWGRQGC 58 (223)
Q Consensus 29 ~~g~~L~~G~s~------s~~vp~~WsGriW~RtgC 58 (223)
..++.|+||+.. .+.+|.++.|+|.+|.+-
T Consensus 69 ~~~~~l~Pg~~~lv~T~e~i~iP~~~~~~i~~RSsl 104 (190)
T 2qxx_A 69 GEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSL 104 (190)
T ss_dssp TCCEEECTTCEEEEEBSSEEECCTTEEEEEECCHHH
T ss_pred CCcEEECCCCEEEEEeEEEEECCcCcEEEEEecccc
Confidence 457899999865 666899999999999654
No 19
>3lqw_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; emerald biostructures, ALS collaborative crystallography; 1.30A {Entamoeba histolytica}
Probab=20.55 E-value=61 Score=25.84 Aligned_cols=30 Identities=27% Similarity=0.427 Sum_probs=23.4
Q ss_pred CceeecCCCe------EEEecCCCCceeEeeecccc
Q 044059 30 GGFKLSSGEE------VVLDVPEKWSGRIWGRQGCR 59 (223)
Q Consensus 30 ~g~~L~~G~s------~s~~vp~~WsGriW~RtgCs 59 (223)
..+.|.||+. ..+.+|.++.|+|++|.+-.
T Consensus 54 ~~~~l~Pg~~~lV~Tgi~i~iP~g~~~~I~pRSsla 89 (163)
T 3lqw_A 54 TNFIIQPHERFLVSTGVSVQIPHQCYGRIAPRSSLA 89 (163)
T ss_dssp SCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHH
T ss_pred CCEEECCCCEEEEEcCCEEECCCCeEEEEEeccccc
Confidence 3478899986 45568999999999997543
No 20
>3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A*
Probab=20.38 E-value=48 Score=25.54 Aligned_cols=30 Identities=23% Similarity=0.317 Sum_probs=23.4
Q ss_pred CceeecCCCe------EEEecCCCCceeEeeecccc
Q 044059 30 GGFKLSSGEE------VVLDVPEKWSGRIWGRQGCR 59 (223)
Q Consensus 30 ~g~~L~~G~s------~s~~vp~~WsGriW~RtgCs 59 (223)
..+.|+||+. ..+.+|+++.++|++|.+-.
T Consensus 32 ~~~~i~Pg~~~lv~Tg~~i~iP~g~~~~i~pRSsla 67 (141)
T 3c2t_A 32 EDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLA 67 (141)
T ss_dssp SCEEECTTCEEEEECCEEEECCTTEEEEEECCHHHH
T ss_pred eeEEECCCCEEEEEcCeEEEcCCCCEEEEEeCCccc
Confidence 3478889985 45668999999999997654
Done!