Query 044064
Match_columns 338
No_of_seqs 167 out of 837
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 11:08:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044064.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044064hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2183 Prolylcarboxypeptidase 100.0 5.2E-79 1.1E-83 583.6 21.6 287 47-338 39-482 (492)
2 KOG2182 Hydrolytic enzymes of 100.0 3.6E-70 7.8E-75 534.7 21.2 278 51-338 49-500 (514)
3 PF05577 Peptidase_S28: Serine 100.0 2.3E-69 5E-74 539.3 12.5 259 60-329 1-434 (434)
4 PF05576 Peptidase_S37: PS-10 100.0 4.8E-29 1E-33 241.0 15.2 261 52-337 30-411 (448)
5 PLN02298 hydrolase, alpha/beta 96.5 0.006 1.3E-07 58.4 6.3 61 90-158 86-147 (330)
6 PF12697 Abhydrolase_6: Alpha/ 95.9 0.014 3E-07 50.4 5.2 62 82-158 17-79 (228)
7 TIGR01250 pro_imino_pep_2 prol 95.4 0.028 6E-07 50.9 5.4 63 84-158 46-109 (288)
8 PLN02385 hydrolase; alpha/beta 95.1 0.048 1E-06 52.8 6.4 60 91-158 115-175 (349)
9 TIGR01607 PST-A Plasmodium sub 95.0 0.048 1E-06 52.8 6.1 70 82-158 66-155 (332)
10 PRK10749 lysophospholipase L2; 95.0 0.057 1.2E-06 52.0 6.6 65 89-158 79-144 (330)
11 PHA02857 monoglyceride lipase; 95.0 0.062 1.3E-06 49.7 6.5 66 83-158 41-110 (276)
12 PLN02652 hydrolase; alpha/beta 94.8 0.06 1.3E-06 53.7 6.2 66 83-159 152-222 (395)
13 TIGR01249 pro_imino_pep_1 prol 94.7 0.038 8.3E-07 52.4 4.5 55 91-158 53-108 (306)
14 PF00561 Abhydrolase_1: alpha/ 94.7 0.042 9.1E-07 48.3 4.3 54 94-158 3-57 (230)
15 TIGR03611 RutD pyrimidine util 94.6 0.048 1E-06 48.6 4.6 54 91-158 39-93 (257)
16 TIGR03695 menH_SHCHC 2-succiny 94.5 0.072 1.6E-06 46.6 5.5 55 91-158 27-83 (251)
17 TIGR02427 protocat_pcaD 3-oxoa 94.5 0.049 1.1E-06 47.9 4.4 55 91-160 39-94 (251)
18 PRK10566 esterase; Provisional 94.5 0.055 1.2E-06 49.2 4.7 71 85-160 49-122 (249)
19 TIGR01840 esterase_phb esteras 94.2 0.087 1.9E-06 47.3 5.3 73 83-158 35-108 (212)
20 COG2267 PldB Lysophospholipase 94.1 0.097 2.1E-06 50.2 5.8 60 89-158 59-120 (298)
21 PLN02824 hydrolase, alpha/beta 93.7 0.13 2.9E-06 48.1 5.8 66 83-158 49-115 (294)
22 TIGR03056 bchO_mg_che_rel puta 93.4 0.12 2.6E-06 47.1 4.9 60 83-158 48-108 (278)
23 TIGR03502 lipase_Pla1_cef extr 93.3 0.17 3.7E-06 54.7 6.5 76 83-158 465-568 (792)
24 PLN02211 methyl indole-3-aceta 93.1 0.2 4.3E-06 47.0 6.0 55 91-158 45-100 (273)
25 PRK11126 2-succinyl-6-hydroxy- 93.1 0.12 2.7E-06 46.4 4.3 52 91-158 27-79 (242)
26 PRK00870 haloalkane dehalogena 93.0 0.19 4.1E-06 47.3 5.7 63 83-158 62-128 (302)
27 PRK10673 acyl-CoA esterase; Pr 92.8 0.19 4.1E-06 45.4 5.3 58 83-158 36-94 (255)
28 PTZ00472 serine carboxypeptida 92.5 0.22 4.9E-06 50.7 5.8 61 91-158 121-184 (462)
29 PLN02511 hydrolase 92.2 0.25 5.3E-06 49.0 5.5 64 87-161 125-189 (388)
30 PLN02965 Probable pheophorbida 92.1 0.31 6.6E-06 44.7 5.6 55 91-158 30-85 (255)
31 PRK05855 short chain dehydroge 91.9 0.2 4.3E-06 51.2 4.6 56 91-158 51-107 (582)
32 KOG2564 Predicted acetyltransf 91.9 0.4 8.6E-06 45.8 6.1 66 82-158 93-159 (343)
33 TIGR03343 biphenyl_bphD 2-hydr 91.8 0.23 4.9E-06 45.7 4.5 55 90-158 59-114 (282)
34 PF00326 Peptidase_S9: Prolyl 90.9 0.13 2.9E-06 45.9 1.9 69 84-158 7-77 (213)
35 TIGR02240 PHA_depoly_arom poly 90.8 0.34 7.4E-06 44.9 4.6 53 91-158 51-104 (276)
36 PRK10985 putative hydrolase; P 90.7 0.5 1.1E-05 45.4 5.8 60 87-158 83-144 (324)
37 TIGR03100 hydr1_PEP hydrolase, 90.6 0.58 1.3E-05 43.9 6.0 57 90-158 56-113 (274)
38 PF11144 DUF2920: Protein of u 90.3 0.22 4.8E-06 49.6 3.0 40 124-164 162-205 (403)
39 TIGR03101 hydr2_PEP hydrolase, 90.1 0.67 1.4E-05 43.8 6.0 64 83-158 45-112 (266)
40 TIGR01738 bioH putative pimelo 90.0 0.4 8.6E-06 42.0 4.1 40 271-310 188-230 (245)
41 PF07859 Abhydrolase_3: alpha/ 90.0 0.3 6.6E-06 43.2 3.4 62 81-158 19-84 (211)
42 PRK03592 haloalkane dehalogena 89.5 0.59 1.3E-05 43.7 5.1 60 82-158 46-106 (295)
43 KOG1838 Alpha/beta hydrolase [ 88.7 0.67 1.5E-05 46.4 5.0 70 83-164 146-217 (409)
44 TIGR00976 /NonD putative hydro 88.3 0.69 1.5E-05 48.0 5.1 62 85-158 48-110 (550)
45 PRK08775 homoserine O-acetyltr 87.7 0.64 1.4E-05 44.9 4.1 52 91-158 99-151 (343)
46 PLN02679 hydrolase, alpha/beta 87.6 0.92 2E-05 44.3 5.2 54 91-158 114-168 (360)
47 PRK03204 haloalkane dehalogena 86.9 0.98 2.1E-05 42.4 4.8 53 92-158 61-114 (286)
48 PF01738 DLH: Dienelactone hyd 86.7 0.91 2E-05 40.7 4.3 66 272-337 146-218 (218)
49 PLN02894 hydrolase, alpha/beta 85.7 1.3 2.7E-05 44.2 5.1 63 84-158 126-189 (402)
50 KOG1455 Lysophospholipase [Lip 85.6 2.3 4.9E-05 41.0 6.4 60 91-158 82-142 (313)
51 PRK14875 acetoin dehydrogenase 85.3 1.2 2.6E-05 42.8 4.6 52 92-158 158-210 (371)
52 COG4757 Predicted alpha/beta h 85.2 2.2 4.7E-05 39.9 5.9 72 84-162 50-122 (281)
53 PLN02578 hydrolase 85.0 1.5 3.2E-05 42.7 5.1 58 84-158 107-165 (354)
54 PF05677 DUF818: Chlamydia CHL 84.7 2.3 5E-05 41.7 6.1 71 82-164 162-234 (365)
55 PF12695 Abhydrolase_5: Alpha/ 84.5 0.98 2.1E-05 36.9 3.1 57 82-159 18-75 (145)
56 PLN03084 alpha/beta hydrolase 84.2 1.7 3.6E-05 43.3 5.1 57 91-158 153-210 (383)
57 KOG2382 Predicted alpha/beta h 84.2 1.6 3.5E-05 42.2 4.9 65 80-156 69-134 (315)
58 PF00975 Thioesterase: Thioest 83.9 1.3 2.9E-05 39.5 4.0 61 82-158 15-79 (229)
59 PF00450 Peptidase_S10: Serine 83.8 1.4 3E-05 43.4 4.4 62 91-158 85-149 (415)
60 KOG4391 Predicted alpha/beta h 83.8 1.9 4.2E-05 39.8 4.9 61 86-158 101-162 (300)
61 PRK07581 hypothetical protein; 82.5 2.3 5E-05 40.7 5.3 58 271-332 275-336 (339)
62 COG3208 GrsT Predicted thioest 82.3 1 2.2E-05 42.0 2.6 19 142-160 71-89 (244)
63 TIGR03230 lipo_lipase lipoprot 81.8 3.4 7.4E-05 42.0 6.3 59 91-158 73-132 (442)
64 PRK10162 acetyl esterase; Prov 81.5 2.4 5.3E-05 40.7 5.0 61 82-158 103-167 (318)
65 PLN02872 triacylglycerol lipas 81.3 2.4 5.2E-05 42.4 5.0 74 81-158 98-173 (395)
66 TIGR01836 PHA_synth_III_C poly 77.8 3.5 7.7E-05 39.9 4.9 63 81-158 85-149 (350)
67 PLN02980 2-oxoglutarate decarb 76.1 4.8 0.0001 47.5 6.1 60 92-158 1398-1458(1655)
68 PRK06489 hypothetical protein; 76.0 3.7 8.1E-05 39.9 4.5 61 91-158 105-167 (360)
69 PRK10349 carboxylesterase BioH 75.4 3.6 7.9E-05 37.3 4.0 45 267-311 192-239 (256)
70 cd00707 Pancreat_lipase_like P 74.8 3.8 8.2E-05 38.7 4.1 61 89-158 64-125 (275)
71 PRK10673 acyl-CoA esterase; Pr 74.7 3.5 7.5E-05 37.1 3.7 54 272-337 196-252 (255)
72 PLN02209 serine carboxypeptida 73.7 21 0.00044 36.3 9.2 62 90-158 116-180 (437)
73 PF06057 VirJ: Bacterial virul 72.6 6.2 0.00013 35.6 4.6 62 80-158 19-81 (192)
74 PLN02213 sinapoylglucose-malat 72.3 7.4 0.00016 37.5 5.5 36 122-158 28-64 (319)
75 cd00312 Esterase_lipase Estera 71.1 7.9 0.00017 39.2 5.6 70 83-158 116-189 (493)
76 PLN03087 BODYGUARD 1 domain co 71.0 5.5 0.00012 40.9 4.4 54 91-158 232-287 (481)
77 PRK11460 putative hydrolase; P 70.5 4.5 9.8E-05 36.9 3.4 54 272-333 149-209 (232)
78 TIGR03611 RutD pyrimidine util 66.8 7.7 0.00017 34.2 4.1 55 272-338 199-256 (257)
79 PF02129 Peptidase_S15: X-Pro 65.7 6.3 0.00014 36.7 3.4 60 88-158 54-114 (272)
80 TIGR01392 homoserO_Ac_trn homo 65.4 9.5 0.00021 36.9 4.7 61 91-158 72-140 (351)
81 PLN00021 chlorophyllase 64.7 9.3 0.0002 36.9 4.4 14 145-158 126-139 (313)
82 COG0596 MhpC Predicted hydrola 64.6 6.6 0.00014 33.5 3.1 50 92-158 51-101 (282)
83 COG0657 Aes Esterase/lipase [L 63.5 15 0.00033 34.7 5.6 62 81-158 100-165 (312)
84 PLN03016 sinapoylglucose-malat 63.2 14 0.0003 37.5 5.5 61 91-158 115-178 (433)
85 PHA02857 monoglyceride lipase; 62.1 8.1 0.00017 35.4 3.4 58 272-338 210-271 (276)
86 PRK05077 frsA fermentation/res 61.7 15 0.00032 36.9 5.4 59 88-158 219-278 (414)
87 PF06259 Abhydrolase_8: Alpha/ 60.6 10 0.00022 33.7 3.5 36 122-158 87-122 (177)
88 PF12146 Hydrolase_4: Putative 59.8 13 0.00028 28.3 3.5 37 90-134 42-79 (79)
89 COG3946 VirJ Type IV secretory 58.1 9.8 0.00021 38.2 3.2 44 113-158 292-339 (456)
90 COG1506 DAP2 Dipeptidyl aminop 57.0 12 0.00026 39.5 4.0 69 83-158 416-486 (620)
91 KOG1454 Predicted hydrolase/ac 56.7 12 0.00025 36.4 3.5 39 273-311 266-307 (326)
92 TIGR01738 bioH putative pimelo 56.0 21 0.00046 30.8 4.8 48 91-158 30-78 (245)
93 PLN02454 triacylglycerol lipas 56.0 15 0.00033 37.0 4.3 35 124-158 207-241 (414)
94 PF10503 Esterase_phd: Esteras 55.3 21 0.00045 32.8 4.8 72 83-158 38-110 (220)
95 TIGR01249 pro_imino_pep_1 prol 54.9 16 0.00035 34.4 4.2 53 273-336 250-305 (306)
96 TIGR03100 hydr1_PEP hydrolase, 54.2 14 0.0003 34.4 3.6 56 271-338 207-273 (274)
97 PRK11460 putative hydrolase; P 54.0 19 0.00042 32.7 4.4 37 122-158 80-116 (232)
98 PLN02571 triacylglycerol lipas 53.8 11 0.00023 38.1 2.8 32 123-158 208-239 (413)
99 PF00326 Peptidase_S9: Prolyl 53.7 31 0.00068 30.3 5.6 61 271-338 144-211 (213)
100 PRK10115 protease 2; Provision 53.7 9.1 0.0002 41.1 2.4 72 84-164 468-543 (686)
101 TIGR01838 PHA_synth_I poly(R)- 53.1 28 0.0006 36.4 5.8 65 80-158 210-275 (532)
102 KOG4178 Soluble epoxide hydrol 51.0 20 0.00042 35.0 4.0 62 83-158 64-126 (322)
103 PLN02733 phosphatidylcholine-s 50.5 16 0.00035 37.2 3.5 35 122-158 141-175 (440)
104 TIGR03695 menH_SHCHC 2-succiny 48.8 19 0.00041 31.0 3.4 54 272-338 195-251 (251)
105 PLN02385 hydrolase; alpha/beta 48.3 21 0.00045 34.4 3.8 59 271-337 279-342 (349)
106 KOG1552 Predicted alpha/beta h 47.8 41 0.0009 31.7 5.5 62 82-156 79-141 (258)
107 PLN03037 lipase class 3 family 47.7 16 0.00035 37.8 3.0 34 123-158 298-331 (525)
108 TIGR02427 protocat_pcaD 3-oxoa 47.4 25 0.00053 30.4 3.9 38 272-309 194-234 (251)
109 PLN02761 lipase class 3 family 47.2 17 0.00038 37.6 3.1 36 123-158 272-307 (527)
110 PF09752 DUF2048: Uncharacteri 46.8 26 0.00057 34.5 4.2 71 83-158 114-188 (348)
111 PLN02408 phospholipase A1 45.8 20 0.00044 35.5 3.3 32 123-158 182-213 (365)
112 PLN02753 triacylglycerol lipas 45.0 19 0.00041 37.4 3.0 35 123-158 291-325 (531)
113 PLN02310 triacylglycerol lipas 43.5 22 0.00047 35.8 3.1 35 122-158 188-222 (405)
114 PF07519 Tannase: Tannase and 43.3 42 0.00091 34.4 5.3 62 267-338 349-425 (474)
115 PLN02679 hydrolase, alpha/beta 43.1 36 0.00078 33.1 4.6 38 272-309 293-338 (360)
116 PF11187 DUF2974: Protein of u 42.7 26 0.00056 32.2 3.3 29 127-158 69-97 (224)
117 TIGR02821 fghA_ester_D S-formy 42.5 62 0.0014 30.0 6.0 41 272-312 212-260 (275)
118 PF10230 DUF2305: Uncharacteri 42.2 83 0.0018 29.5 6.7 74 82-158 21-97 (266)
119 TIGR03343 biphenyl_bphD 2-hydr 41.9 40 0.00087 30.6 4.5 38 272-309 224-264 (282)
120 PF01764 Lipase_3: Lipase (cla 41.8 25 0.00054 28.7 2.8 15 144-158 63-77 (140)
121 PLN02324 triacylglycerol lipas 41.4 26 0.00057 35.3 3.3 32 123-158 197-228 (415)
122 PF07819 PGAP1: PGAP1-like pro 39.6 34 0.00073 31.3 3.6 30 129-158 66-98 (225)
123 PLN02824 hydrolase, alpha/beta 39.4 35 0.00075 31.6 3.7 38 272-309 235-275 (294)
124 cd00519 Lipase_3 Lipase (class 39.4 33 0.00072 30.9 3.5 29 128-158 113-141 (229)
125 cd00741 Lipase Lipase. Lipase 38.7 24 0.00052 29.6 2.3 16 143-158 26-41 (153)
126 PLN02802 triacylglycerol lipas 38.5 29 0.00064 35.8 3.2 32 123-158 312-343 (509)
127 TIGR01250 pro_imino_pep_2 prol 38.3 40 0.00088 29.9 3.9 39 272-310 232-272 (288)
128 PLN02298 hydrolase, alpha/beta 37.7 35 0.00075 32.3 3.5 58 272-337 252-314 (330)
129 COG2021 MET2 Homoserine acetyl 37.5 29 0.00063 34.4 2.9 32 126-158 129-160 (368)
130 PLN02511 hydrolase 37.1 1.1E+02 0.0025 30.1 7.2 43 271-313 298-344 (388)
131 PF03403 PAF-AH_p_II: Platelet 37.0 20 0.00044 35.5 1.8 24 79-103 116-139 (379)
132 TIGR03056 bchO_mg_che_rel puta 36.4 40 0.00087 30.2 3.6 55 272-338 221-278 (278)
133 COG0429 Predicted hydrolase of 36.1 93 0.002 30.6 6.0 64 87-162 100-166 (345)
134 KOG1282 Serine carboxypeptidas 36.0 71 0.0015 32.7 5.5 64 89-158 115-181 (454)
135 PF02230 Abhydrolase_2: Phosph 35.6 41 0.0009 29.9 3.5 52 272-331 156-214 (216)
136 PLN02578 hydrolase 35.5 47 0.001 32.1 4.1 53 272-337 297-352 (354)
137 PRK13604 luxD acyl transferase 35.3 84 0.0018 30.4 5.7 58 89-158 62-121 (307)
138 PF12697 Abhydrolase_6: Alpha/ 34.1 29 0.00063 29.3 2.1 44 267-310 172-218 (228)
139 PRK10985 putative hydrolase; P 33.1 49 0.0011 31.6 3.7 58 256-313 240-300 (324)
140 PLN03084 alpha/beta hydrolase 33.1 45 0.00098 33.1 3.5 39 272-310 326-366 (383)
141 COG3571 Predicted hydrolase of 32.9 88 0.0019 27.9 4.8 64 272-337 143-208 (213)
142 PRK14875 acetoin dehydrogenase 32.8 63 0.0014 30.8 4.4 39 272-310 315-353 (371)
143 COG3319 Thioesterase domains o 31.6 44 0.00096 31.5 3.0 32 122-158 47-78 (257)
144 PRK10566 esterase; Provisional 31.1 77 0.0017 28.3 4.5 54 272-337 187-249 (249)
145 PLN02719 triacylglycerol lipas 31.1 42 0.00091 34.8 2.9 16 143-158 296-311 (518)
146 PF02450 LCAT: Lecithin:choles 30.4 49 0.0011 32.9 3.3 34 122-158 99-132 (389)
147 PRK00870 haloalkane dehalogena 30.1 50 0.0011 30.8 3.2 37 272-309 240-282 (302)
148 PF01738 DLH: Dienelactone hyd 29.1 34 0.00073 30.4 1.7 37 122-158 75-111 (218)
149 PLN00413 triacylglycerol lipas 28.7 37 0.00079 34.9 2.1 16 143-158 282-297 (479)
150 PRK05371 x-prolyl-dipeptidyl a 28.0 1.1E+02 0.0024 33.4 5.7 64 85-158 273-351 (767)
151 PLN02162 triacylglycerol lipas 27.8 44 0.00095 34.3 2.4 16 143-158 276-291 (475)
152 PRK11071 esterase YqiA; Provis 27.2 61 0.0013 28.5 3.0 39 271-309 136-174 (190)
153 PLN02934 triacylglycerol lipas 27.0 33 0.00071 35.6 1.4 16 143-158 319-334 (515)
154 PRK10162 acetyl esterase; Prov 26.9 1.4E+02 0.0029 28.6 5.6 63 272-337 249-316 (318)
155 PF06821 Ser_hydrolase: Serine 26.7 48 0.001 29.0 2.2 31 128-158 38-68 (171)
156 smart00824 PKS_TE Thioesterase 26.3 1.7E+02 0.0036 24.6 5.6 15 144-158 63-77 (212)
157 COG2939 Carboxypeptidase C (ca 25.7 89 0.0019 32.3 4.2 61 91-158 146-211 (498)
158 PF05448 AXE1: Acetyl xylan es 25.6 86 0.0019 30.4 4.0 78 86-164 105-196 (320)
159 COG2272 PnbA Carboxylesterase 24.4 1.1E+02 0.0025 31.5 4.6 74 83-162 117-197 (491)
160 KOG2100 Dipeptidyl aminopeptid 23.8 54 0.0012 35.7 2.4 78 80-165 547-628 (755)
161 PF02784 Orn_Arg_deC_N: Pyrido 23.6 1.1E+02 0.0023 28.1 4.1 63 84-158 147-210 (251)
162 COG1770 PtrB Protease II [Amin 23.2 71 0.0015 34.2 3.0 69 91-164 476-546 (682)
163 PF00135 COesterase: Carboxyle 23.2 65 0.0014 32.5 2.7 67 84-158 149-221 (535)
164 PRK10252 entF enterobactin syn 23.1 1.5E+02 0.0033 33.7 6.0 60 83-158 1084-1146(1296)
165 KOG1516 Carboxylesterase and r 22.9 85 0.0018 32.2 3.6 65 85-158 138-208 (545)
166 PF05057 DUF676: Putative seri 22.4 79 0.0017 28.5 2.9 37 122-158 55-91 (217)
167 COG0412 Dienelactone hydrolase 22.3 1.1E+02 0.0023 28.2 3.8 74 84-158 48-125 (236)
168 PRK10749 lysophospholipase L2; 21.9 56 0.0012 31.2 1.9 58 272-338 260-327 (330)
169 PF08538 DUF1749: Protein of u 21.3 1.1E+02 0.0023 29.8 3.6 63 82-155 51-118 (303)
170 PRK06765 homoserine O-acetyltr 20.8 81 0.0018 31.4 2.8 80 231-310 273-370 (389)
171 KOG4627 Kynurenine formamidase 20.1 1.3E+02 0.0028 28.0 3.6 91 59-158 55-148 (270)
172 PRK00175 metX homoserine O-ace 20.1 90 0.0019 30.6 2.9 62 91-158 91-160 (379)
173 TIGR00246 tRNA_RlmH_YbeA rRNA 20.0 85 0.0018 27.2 2.4 14 145-158 96-109 (153)
174 TIGR01607 PST-A Plasmodium sub 20.0 1.5E+02 0.0033 28.5 4.4 56 272-338 271-331 (332)
No 1
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=5.2e-79 Score=583.61 Aligned_cols=287 Identities=51% Similarity=0.904 Sum_probs=261.0
Q ss_pred cCCCCCcceeeEEeecCCCCCCCC------------------CC----------ccccccccchHHHhhhhcCCcEEEEE
Q 044064 47 SKPKLPYKTHYFPQVLDHFTFQPK------------------SD----------IECFAANTGFLLDIAPKFNASLVFIE 98 (338)
Q Consensus 47 ~~~~~~~~~~~f~Q~lDHF~~~~~------------------gp----------i~~~~~~~g~~~~lA~~~~Alvv~lE 98 (338)
+..+..++++||+|+||||.+.+. || |+++..++|||.++|+++||++|++|
T Consensus 39 s~~~~~ye~~yf~q~LDHFsF~~~~tF~qRylin~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaE 118 (492)
T KOG2183|consen 39 SIGEYNYETRYFQQPLDHFSFTDNKTFDQRYLINDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAE 118 (492)
T ss_pred ccccccceeEEeecccccccccCccceeeEEEEecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEee
Confidence 444678999999999999998763 45 46778899999999999999999999
Q ss_pred ee-eccCccCcc-ccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc------------------
Q 044064 99 IL-WGINAIWED-SYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL------------------ 158 (338)
Q Consensus 99 HR-YG~S~P~~~-~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL------------------ 158 (338)
|| ||||+||.+ .+++.++|.|||+||||||+|.+++++|++++++.+|||+|||||||||
T Consensus 119 HRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAa 198 (492)
T KOG2183|consen 119 HRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAA 198 (492)
T ss_pred hhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhc
Confidence 99 999999944 4788899999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 044064 159 -------------------------------------------------------------------------------- 158 (338)
Q Consensus 159 -------------------------------------------------------------------------------- 158 (338)
T Consensus 199 SAPvl~f~d~vp~~~f~~ivT~~F~~as~~C~~~I~~sW~ai~~l~~~~nG~q~Ls~~f~lc~~ln~d~~~l~d~l~ea~ 278 (492)
T KOG2183|consen 199 SAPVLYFEDTVPKDVFYRIVTRDFKDASPNCRNTIRKSWDAIDRLAAKDNGLQILSKAFKLCKPLNDDIGDLKDYLREAY 278 (492)
T ss_pred cCceEeecCCCCcchhhhHHHHHHHhhcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHhhhcccccccHHHHHHHHHHHH
Confidence
Q ss_pred -------------------------ccccccCCCCC-hhHHHHHHHHHHHHhccCCCcccccccCCCCC--CCCCceeee
Q 044064 159 -------------------------MCKIIDGLPPG-VSKLSQVFAGASLYYNYSQTEKCFMIEDAADP--HGLDGWRWQ 210 (338)
Q Consensus 159 -------------------------~C~~i~~~~~~-~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~--~~~r~W~yQ 210 (338)
.|..|+..... .+.+++++++++.||||+|+..|+++++.+.. .+.|+|.||
T Consensus 279 ~ylAMVdYPy~t~Fl~pLPa~PV~~~C~~i~~~~~~~~~ll~~i~a~~~~yyNytg~~~C~d~sd~t~~~~~d~~gW~~Q 358 (492)
T KOG2183|consen 279 EYLAMVDYPYPTSFLAPLPAWPVKVVCKYINAPGPNDSDLLDRIFAAVNLYYNYTGSEKCYDISDPTYGSGLDDLGWPWQ 358 (492)
T ss_pred HHHHHhcCCCCccccCcCCCCcHHHHHHHhccCCCChHHHHHHHHHHhhheeccCCCcchhccccccCCCCCCcCCCchh
Confidence 56655543322 56789999999999999999999999865443 356899999
Q ss_pred ecccccccccCCC-CCCCCCCCCChHHHHHHHHhhcCCCCchhhHHhhhcCCchhhHhhhccceEEEeCCCCCCCccccc
Q 044064 211 TCTEMVMPMTCSN-NSMFPPSGYDYKDFAEQCMMTYGVRPRIHWITTEFGGKRIELVLKRFGSNIIFSNGMQDPWSRGGV 289 (338)
Q Consensus 211 ~CtE~g~~~t~~~-~~~f~~~~~~~~~~~~~C~~~FGv~p~~~~~n~~yGG~~~~~~l~~~asnIiFtNG~~DPW~~~gv 289 (338)
+|||+.+++++++ ++||++-+++.+.+++.|.+.||+.|+|+|++..|||.++.. .|||||+||.+|||+.+||
T Consensus 359 aCtEmVMp~~~ng~~~mf~~~~fn~~~y~e~C~~~~~v~prP~wi~t~fgg~~l~~-----~SNiIFSNG~LDPWSGGGV 433 (492)
T KOG2183|consen 359 ACTEMVMPMCSNGVDDMFPDCPFNSESYQEGCMQTFGVTPRPKWITTEFGGADLSA-----FSNIIFSNGLLDPWSGGGV 433 (492)
T ss_pred hhhhhhhccccCCCcccCCCCCCCHHHHHHHHHHhcCCCCCCcceehhhccccchh-----hcceeeeCCCcCCccCcCe
Confidence 9999999999987 899988899999999999999999999999999999988875 6999999999999999999
Q ss_pred cccCCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 290 LKNISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 290 ~~~~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
.+++++++++++|++|+||.|||.+++.||++|+++|++|+++|++||+
T Consensus 434 ~~nis~svvav~~k~GAHHlDLR~~~~~DP~~v~~aR~~Ei~iI~~WI~ 482 (492)
T KOG2183|consen 434 LKNISDSVVAVTIKEGAHHLDLRASHPEDPESVVEARELEIQIIKKWIK 482 (492)
T ss_pred eccccCcEEEEEecCCccceeccCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999984
No 2
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=3.6e-70 Score=534.72 Aligned_cols=278 Identities=27% Similarity=0.442 Sum_probs=227.5
Q ss_pred CCcceeeEEeecCCCCCCCC-----------------CCc----------c--ccccccchHHHhhhhcCCcEEEEEee-
Q 044064 51 LPYKTHYFPQVLDHFTFQPK-----------------SDI----------E--CFAANTGFLLDIAPKFNASLVFIEIL- 100 (338)
Q Consensus 51 ~~~~~~~f~Q~lDHF~~~~~-----------------gpi----------~--~~~~~~g~~~~lA~~~~Alvv~lEHR- 100 (338)
...++.||+|++|||+.+++ ||+ . |.....+.+.++|+++||.|+.||||
T Consensus 49 ~~~~~~~~~Q~lDhF~~~~~~~~Qq~~y~n~~~~~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRF 128 (514)
T KOG2182|consen 49 ANVEQSTFTQKLDHFDSSNGKFFQQRFYNNNQWAKPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRF 128 (514)
T ss_pred ccccccchhhhhhhhhcchhhhhhhheeeccccccCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeec
Confidence 46788999999999965543 444 3 33445568999999999999999999
Q ss_pred eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCC-CCEEEEcccchhhc---------------------
Q 044064 101 WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDS-SPFVVFGGSYGGRL--------------------- 158 (338)
Q Consensus 101 YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~-~pwI~~GGSY~GaL--------------------- 158 (338)
||+|.|+.++ +++||||||++|||+|+|+||+.++.+++..+ +|||+|||||+|+|
T Consensus 129 YG~S~P~~~~--st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 129 YGQSSPIGDL--STSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred cccCCCCCCC--cccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 9999999998 99999999999999999999999999986644 59999999999999
Q ss_pred ------------------------------------------------------ccccccCCCC----------------
Q 044064 159 ------------------------------------------------------MCKIIDGLPP---------------- 168 (338)
Q Consensus 159 ------------------------------------------------------~C~~i~~~~~---------------- 168 (338)
+|.++++..+
T Consensus 207 v~A~~DF~EY~~VVe~s~~~~~~~C~~ai~~~f~~~~~l~~t~~gr~~Lk~~Fnl~~~f~~~~s~~d~~~ff~nv~~~Fq 286 (514)
T KOG2182|consen 207 VLAKVDFYEYLMVVEESLRRYSPECADAIKEGFKSMEELLLTKGGRQALKSLFNLCPPFDNNVSDTDQHNFFSNVYSNFQ 286 (514)
T ss_pred eeEEecHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhccCCccccchhHHHHHHHHHHHHHhhh
Confidence 4444421101
Q ss_pred ------------------------------ChhHHHHHHHHHHHHhccCCCcccccccCC-------------CCCCCCC
Q 044064 169 ------------------------------GVSKLSQVFAGASLYYNYSQTEKCFMIEDA-------------ADPHGLD 205 (338)
Q Consensus 169 ------------------------------~~~~l~~~~~~~~~~~~~~~~~~C~~~~~~-------------~~~~~~r 205 (338)
..+.+.++...+..+.+..+ ..|.+.++. .+..++|
T Consensus 287 gvvQY~gd~~~~~~~~~~i~~~C~~l~n~t~~d~v~~~~~~~~~~~~~~~-~~c~~~~Y~~~i~~~~n~~~~~~~~~a~r 365 (514)
T KOG2182|consen 287 GVVQYSGDNSNATASGLGIPAMCDILNNKTPGDDVVAVNKYMNWFNNGFG-YGCLDNTYNGMISYLKNSTEPGEDAAADR 365 (514)
T ss_pred hheeecCCCCcccccccChhHHHHHhhcCCCCchHHHHHHHHHHHHhccC-CCcCCccHHHHHHHhhcccCcCcccccch
Confidence 11122222222222333332 357776552 1234679
Q ss_pred ceeeeecccccccccCCC-CCCCCCCCCChHHHHHHHHhhcC-------CCCchhhHHhhhcC-CchhhHhhhccceEEE
Q 044064 206 GWRWQTCTEMVMPMTCSN-NSMFPPSGYDYKDFAEQCMMTYG-------VRPRIHWITTEFGG-KRIELVLKRFGSNIIF 276 (338)
Q Consensus 206 ~W~yQ~CtE~g~~~t~~~-~~~f~~~~~~~~~~~~~C~~~FG-------v~p~~~~~n~~yGG-~~~~~~l~~~asnIiF 276 (338)
+|.||||||||||||+++ +++|+ ..++++||.++|+++|| +.+.++.+|.+||| .+++ ++||||
T Consensus 366 ~W~wQtCtEfG~yQttds~~~iFg-s~vp~~~fid~C~dlFG~~y~~~~i~~~V~~TN~~YGG~~~~~------atnVvf 438 (514)
T KOG2182|consen 366 LWTWQTCTEFGYYQTTDSGNSIFG-STVPLDYFIDLCMDLFGAEYTAKGIDPNVDQTNYKYGGRDNYN------ATNVVF 438 (514)
T ss_pred hhhhhhcccceeeEecCCCCcccc-CCCChHHHHHHHHHHhCchhhhhHHHHHHHHhhhhcCcccccC------cceEEe
Confidence 999999999999999875 88996 68999999999999999 34688999999999 6777 899999
Q ss_pred eCCCCCCCccccccccCCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 277 SNGMQDPWSRGGVLKNISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 277 tNG~~DPW~~~gv~~~~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
+||+.||||.+|...+...+++.++|.|++||.||+++.+.|+++|+.||+.|.+.|.+||+
T Consensus 439 ~NG~~DPWh~LG~~~st~~~~~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~ 500 (514)
T KOG2182|consen 439 PNGSLDPWHALGLQNSTDSSVVSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLH 500 (514)
T ss_pred cCCCCCchhhhccccCCCCCceEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999877778899999999999999999999999999999999999999984
No 3
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=100.00 E-value=2.3e-69 Score=539.27 Aligned_cols=259 Identities=35% Similarity=0.601 Sum_probs=170.2
Q ss_pred eecCCCCCCCC-----------------CCcc----------ccccccchHHHhhhhcCCcEEEEEee-eccCccCcccc
Q 044064 60 QVLDHFTFQPK-----------------SDIE----------CFAANTGFLLDIAPKFNASLVFIEIL-WGINAIWEDSY 111 (338)
Q Consensus 60 Q~lDHF~~~~~-----------------gpi~----------~~~~~~g~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~ 111 (338)
|+|||||+++. |||. .+....|++.+||+++||++|+|||| ||+|+||+++
T Consensus 1 Q~lDHf~~~~~~tf~qRY~~n~~~~~~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~- 79 (434)
T PF05577_consen 1 QPLDHFNPSNNGTFSQRYWVNDQYYKPGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDL- 79 (434)
T ss_dssp EES-SS-SSTT-EEEEEEEEE-TT--TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGG-
T ss_pred CCCCCCCCCCCCeEEEEEEEEhhhcCCCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCcccc-
Confidence 89999998754 5653 23445779999999999999999999 9999999998
Q ss_pred CCccccCCCChhhhhhhHHHHHHHHhhhc-CCCCCCEEEEcccchhhc--------------------------------
Q 044064 112 KSAETLGYLNSQQALADDAVLIRSLKQNL-SSDSSPFVVFGGSYGGRL-------------------------------- 158 (338)
Q Consensus 112 ~s~~nL~yLt~~QALaD~a~Fi~~~k~~~-~~~~~pwI~~GGSY~GaL-------------------------------- 158 (338)
|++||||||+||||||+|+||+++|.++ ..+++|||+|||||||||
T Consensus 80 -s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a~~df~~y~ 158 (434)
T PF05577_consen 80 -STENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQAKVDFWEYF 158 (434)
T ss_dssp -GGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCHCCTTTHHH
T ss_pred -chhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeeeecccHHHH
Confidence 9999999999999999999999999887 457789999999999999
Q ss_pred -------------------------------------------ccccccCCCCChh------HHHHHHHHHHHH------
Q 044064 159 -------------------------------------------MCKIIDGLPPGVS------KLSQVFAGASLY------ 183 (338)
Q Consensus 159 -------------------------------------------~C~~i~~~~~~~~------~l~~~~~~~~~~------ 183 (338)
+|..++.. ...+ .+...+..+++|
T Consensus 159 ~~v~~~~~~~~~~C~~~i~~a~~~i~~~~~~~~~~~~l~~~f~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~qy~~~~~~ 237 (434)
T PF05577_consen 159 EVVTESLRKYGPNCYDAIRAAFDQIDKLLKTGNGRQQLKKKFKLCFPLDDK-NDDDFAYFFSSIADAFQGMVQYPYPGNF 237 (434)
T ss_dssp HHHHHHHHCCSCCHHHHHHHHHHHHHHHCCTCHHHHHHHHHCTBSS---TC-HCHHHHHHHHHHHHHHHHHT--SS-EES
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHhhcccHHHHHHHHhhhccccccc-cchHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 34333221 0000 011112222233
Q ss_pred ----------------------------------hccCCCcccccc-----cC-------CCC----CCCCCceeeeecc
Q 044064 184 ----------------------------------YNYSQTEKCFMI-----ED-------AAD----PHGLDGWRWQTCT 213 (338)
Q Consensus 184 ----------------------------------~~~~~~~~C~~~-----~~-------~~~----~~~~r~W~yQ~Ct 213 (338)
+.+. ...|.+. .+ ... ..++|+|.||+||
T Consensus 238 ~~~~~~~~i~~~C~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~W~wQtCt 316 (434)
T PF05577_consen 238 NSPLPAWPIRQLCDSLTNASWPDEVLRLAALAQWYNNF-NTTCYSNSCADFDYNCFDSTYDDSSFDDNADDRQWLWQTCT 316 (434)
T ss_dssp SSEE-SSHHHHHHHHCHTSSSHHHHHHHHHHHHHHCCC-H-SCCHHCCC--SS-BSSTT---SS----HHHHHHHHHHCC
T ss_pred ccCCCCcchHHHhhhhcccccCchhHHHHHHHHHHHHh-cCccccccccccccccccCCCCcccccccccchhhHHHhhh
Confidence 0110 0112221 11 001 1246999999999
Q ss_pred cccccccCCC-CCCCCCCCCChHHHHHHHHhhcCCC-------CchhhHHhhhcC-CchhhHhhhccceEEEeCCCCCCC
Q 044064 214 EMVMPMTCSN-NSMFPPSGYDYKDFAEQCMMTYGVR-------PRIHWITTEFGG-KRIELVLKRFGSNIIFSNGMQDPW 284 (338)
Q Consensus 214 E~g~~~t~~~-~~~f~~~~~~~~~~~~~C~~~FGv~-------p~~~~~n~~yGG-~~~~~~l~~~asnIiFtNG~~DPW 284 (338)
|||||||+++ .++| ++.++++++.++|+++||.. ++++++|.+||| ++++ ++||+||||++|||
T Consensus 317 E~G~fqt~~~~~~l~-~~~~~l~~~~~~C~~~Fg~~~~~~~i~~~~~~tN~~YGG~~~~~------~tnviFtNG~~DPW 389 (434)
T PF05577_consen 317 EFGYFQTADGPNSLF-SRLVNLDYYQDQCQDVFGPGPNPESIPPNVDWTNNYYGGWWNPN------ATNVIFTNGELDPW 389 (434)
T ss_dssp T-B----B-SSSSSS--B---HHHHHHHHHHHHS----T------TCHHHHHHTTT--TT--------SEEEEEETT-CC
T ss_pred hccceeccCCCCCcc-cCCCCHHHHHHHHHHHhCCCccccccccchhHHhheeCccccCC------CCeEEeeCCCCCCc
Confidence 9999999986 8899 47899999999999999853 367889999999 8888 79999999999999
Q ss_pred ccccccccCCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHH
Q 044064 285 SRGGVLKNISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQE 329 (338)
Q Consensus 285 ~~~gv~~~~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~ 329 (338)
|.+|+.++.+.++++++||||+||.||+++++.||++|++||++|
T Consensus 390 ~~lgv~~~~~~~~~~~~I~g~~Hc~Dl~~~~~~D~~~l~~aR~~i 434 (434)
T PF05577_consen 390 RALGVTSDSSDSVPAIVIPGGAHCSDLYPPNPNDPPELKAARQRI 434 (434)
T ss_dssp GGGS--S-SSSSEEEEEETT--TTGGGS---TT--HHHHHHHHH-
T ss_pred ccccCCCCCCCCcccEEECCCeeeccccCCCCCCCHHHHHHHhhC
Confidence 999999988999999999999999999999999999999999986
No 4
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=99.96 E-value=4.8e-29 Score=241.05 Aligned_cols=261 Identities=17% Similarity=0.246 Sum_probs=175.7
Q ss_pred CcceeeEEeecCCCCCCCC--------------CCccccccc-----cchHHHhhhhcCCcEEEEEee-eccCccCcccc
Q 044064 52 PYKTHYFPQVLDHFTFQPK--------------SDIECFAAN-----TGFLLDIAPKFNASLVFIEIL-WGINAIWEDSY 111 (338)
Q Consensus 52 ~~~~~~f~Q~lDHF~~~~~--------------gpi~~~~~~-----~g~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~ 111 (338)
.+-..+|+|||||.+|+.+ -|...+... +-...|+++-++|..|++||| ||.|+|-
T Consensus 30 Rffvl~y~QPvDH~~P~~gtF~QRvtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld~NQl~vEhRfF~~SrP~---- 105 (448)
T PF05576_consen 30 RFFVLRYTQPVDHRHPEKGTFQQRVTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLDGNQLSVEHRFFGPSRPE---- 105 (448)
T ss_pred EEEEEeeecCCCCCCCCCCceEEEEEEEEcCCCCCeEEEecCcccccCccccchhHhhccceEEEEEeeccCCCCC----
Confidence 3445589999999999886 343222111 112359999999999999999 9999994
Q ss_pred CCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc---------------------cc-ccccCCC--
Q 044064 112 KSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL---------------------MC-KIIDGLP-- 167 (338)
Q Consensus 112 ~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL---------------------~C-~~i~~~~-- 167 (338)
..+++|||++||.+|.++.++.+|..|. .+||..|||.|||. .| ...++..
T Consensus 106 --p~DW~~Lti~QAA~D~Hri~~A~K~iY~---~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~~~~~eD~~y~ 180 (448)
T PF05576_consen 106 --PADWSYLTIWQAASDQHRIVQAFKPIYP---GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPNDVVNREDSRYD 180 (448)
T ss_pred --CCCcccccHhHhhHHHHHHHHHHHhhcc---CCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccccCcccchhHH
Confidence 5689999999999999999999999886 68999999999998 21 1111100
Q ss_pred -----CC----h-----------------------------------hHHHHHHHHHHH-----HhccCCCcccccccCC
Q 044064 168 -----PG----V-----------------------------------SKLSQVFAGASL-----YYNYSQTEKCFMIEDA 198 (338)
Q Consensus 168 -----~~----~-----------------------------------~~l~~~~~~~~~-----~~~~~~~~~C~~~~~~ 198 (338)
-+ . ..++++++.+++ |+.|.....|..+..+
T Consensus 181 ~Fl~~VGt~eCR~~l~~~Qre~L~RR~~l~~~~~~yAa~~g~TF~~vG~~dra~E~~VLe~~faFWQy~~~~~C~~IP~~ 260 (448)
T PF05576_consen 181 RFLEKVGTAECRDKLNDFQREALKRRDELLPRYEAYAAENGLTFRTVGSLDRAYEYAVLEYPFAFWQYGTPADCASIPAD 260 (448)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCCEEeecCcHHHHHHHHHhhhhhHhhccCCccchhcCCCC
Confidence 00 0 023344444433 2344444579887641
Q ss_pred ----CC-----------------CC---CCCceeeeecccccccccCCCCCCCCCCCCChHHHHHHHHhhcCCCCchhhH
Q 044064 199 ----AD-----------------PH---GLDGWRWQTCTEMVMPMTCSNNSMFPPSGYDYKDFAEQCMMTYGVRPRIHWI 254 (338)
Q Consensus 199 ----~~-----------------~~---~~r~W~yQ~CtE~g~~~t~~~~~~f~~~~~~~~~~~~~C~~~FGv~p~~~~~ 254 (338)
++ +. ...+.+||.-||+||+..... .+...++...+. =...| ++.++
T Consensus 261 ~~~AsddeL~~~l~~isg~s~ysDq~l~~y~pyyyQA~teLG~p~~~~~--hl~~~ll~~g~~---~~r~f-vP~~i--- 331 (448)
T PF05576_consen 261 AKTASDDELFDFLDAISGFSFYSDQGLEPYTPYYYQAGTELGYPGYDTP--HLRKKLLRYGYQ---PPRNF-VPRDI--- 331 (448)
T ss_pred cCCCCHHHHHHHHHhhcCccccccCCcccccChHHHHHhhcCCCCCCCc--chhccccccCCC---CcccC-CCCCC---
Confidence 10 11 236899999999999875532 121111111110 02223 22111
Q ss_pred HhhhcC---CchhhHhhhccceEEEeCCCCCCCcccccccc-CCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHH
Q 044064 255 TTEFGG---KRIELVLKRFGSNIIFSNGMQDPWSRGGVLKN-ISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEV 330 (338)
Q Consensus 255 n~~yGG---~~~~~~l~~~asnIiFtNG~~DPW~~~gv~~~-~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~ 330 (338)
..+|-- .+|..+++++++|++|++|++|||++.++.-. .+.+..+++.|||.|.+++..-.+. .|.+..
T Consensus 332 ~m~Fdp~am~dI~~Wvr~~~~rmlFVYG~nDPW~A~~f~l~~g~~ds~v~~~PggnHga~I~~L~~~-------~r~~a~ 404 (448)
T PF05576_consen 332 PMKFDPTAMRDIDRWVRNNGPRMLFVYGENDPWSAEPFRLGKGKRDSYVFTAPGGNHGARIAGLPEA-------ERAEAT 404 (448)
T ss_pred CCCcCHHHHHHHHHHHHhCCCeEEEEeCCCCCcccCccccCCCCcceEEEEcCCCcccccccCCCHH-------HHHHHH
Confidence 112221 36778888889999999999999999998753 3556778899999999998865433 788889
Q ss_pred HHHHHhh
Q 044064 331 EIIQKWV 337 (338)
Q Consensus 331 ~~i~~Wl 337 (338)
..|.+|-
T Consensus 405 a~l~~Wa 411 (448)
T PF05576_consen 405 ARLRRWA 411 (448)
T ss_pred HHHHHHc
Confidence 9999994
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=96.46 E-value=0.006 Score=58.41 Aligned_cols=61 Identities=18% Similarity=0.230 Sum_probs=47.6
Q ss_pred cCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 90 FNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 90 ~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.|-.|+++.+| ||+|...... .-+.++.+.|+..+++.++......+.|++++|.|.||++
T Consensus 86 ~Gy~V~~~D~rGhG~S~~~~~~--------~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~i 147 (330)
T PLN02298 86 MGFACFALDLEGHGRSEGLRAY--------VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAI 147 (330)
T ss_pred CCCEEEEecCCCCCCCCCcccc--------CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHH
Confidence 37799999999 9999642111 1357788899999999998654334568999999999988
No 6
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=95.88 E-value=0.014 Score=50.44 Aligned_cols=62 Identities=18% Similarity=0.199 Sum_probs=47.7
Q ss_pred hHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 82 FLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 82 ~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
++..|+ -|--+++++.| +|.|.+..+ ....+.++-.+|+..+++.+.. .|++++|.|+||.+
T Consensus 17 ~~~~l~--~~~~v~~~d~~G~G~s~~~~~-------~~~~~~~~~~~~l~~~l~~~~~------~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 17 LAEALA--RGYRVIAFDLPGHGRSDPPPD-------YSPYSIEDYAEDLAELLDALGI------KKVILVGHSMGGMI 79 (228)
T ss_dssp HHHHHH--TTSEEEEEECTTSTTSSSHSS-------GSGGSHHHHHHHHHHHHHHTTT------SSEEEEEETHHHHH
T ss_pred HHHHHh--CCCEEEEEecCCccccccccc-------cCCcchhhhhhhhhhccccccc------cccccccccccccc
Confidence 344554 38889999999 999987532 2235578888899888876654 68999999999988
No 7
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=95.37 E-value=0.028 Score=50.88 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=46.1
Q ss_pred HHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 84 LDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 84 ~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
..+.++.|--+|.+++| +|+|...... -++.+.++..+|+..+++.++ ..+++++|.|+||.+
T Consensus 46 ~~~l~~~g~~vi~~d~~G~G~s~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~liG~S~Gg~i 109 (288)
T TIGR01250 46 RELLKEEGREVIMYDQLGCGYSDQPDDS------DELWTIDYFVDELEEVREKLG------LDKFYLLGHSWGGML 109 (288)
T ss_pred HHHHHhcCCEEEEEcCCCCCCCCCCCcc------cccccHHHHHHHHHHHHHHcC------CCcEEEEEeehHHHH
Confidence 44455557899999999 9998753221 125678888888877766543 136999999999998
No 8
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=95.10 E-value=0.048 Score=52.85 Aligned_cols=60 Identities=17% Similarity=0.218 Sum_probs=45.6
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
|-.|+++++| +|.|...... ..+.++-++|+..+++.++......+.|++++|.|+||++
T Consensus 115 g~~v~~~D~~G~G~S~~~~~~--------~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~v 175 (349)
T PLN02385 115 GYGVFAMDYPGFGLSEGLHGY--------IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAV 175 (349)
T ss_pred CCEEEEecCCCCCCCCCCCCC--------cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHH
Confidence 6789999999 9998642110 1256777899999998887543334568999999999998
No 9
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=95.02 E-value=0.048 Score=52.83 Aligned_cols=70 Identities=13% Similarity=0.241 Sum_probs=50.7
Q ss_pred hHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCC-CChhhhhhhHHHHHHHHhhhc-----------------CC
Q 044064 82 FLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGY-LNSQQALADDAVLIRSLKQNL-----------------SS 142 (338)
Q Consensus 82 ~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~y-Lt~~QALaD~a~Fi~~~k~~~-----------------~~ 142 (338)
++..|+++ |-.|+++.|| -|+|..... ...+ -+.++.++|+..|++.++++. ..
T Consensus 66 ~~~~l~~~-G~~V~~~D~rGHG~S~~~~~------~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (332)
T TIGR01607 66 WIENFNKN-GYSVYGLDLQGHGESDGLQN------LRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTK 138 (332)
T ss_pred HHHHHHHC-CCcEEEecccccCCCccccc------cccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccc
Confidence 44455544 8899999999 999874311 1122 367888999999999987631 11
Q ss_pred C-CCCEEEEcccchhhc
Q 044064 143 D-SSPFVVFGGSYGGRL 158 (338)
Q Consensus 143 ~-~~pwI~~GGSY~GaL 158 (338)
+ +.|+|++|.|.||++
T Consensus 139 ~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 139 ENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cCCCceeEeeccCccHH
Confidence 2 579999999999988
No 10
>PRK10749 lysophospholipase L2; Provisional
Probab=94.99 E-value=0.057 Score=51.98 Aligned_cols=65 Identities=14% Similarity=0.044 Sum_probs=47.6
Q ss_pred hcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 89 KFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 89 ~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+.|-.++++.+| +|.|.+..+. ...-...+.+.-++|+..+++.+.+.+ +..|++++|.|+||++
T Consensus 79 ~~g~~v~~~D~~G~G~S~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~l~GhSmGG~i 144 (330)
T PRK10749 79 HLGYDVLIIDHRGQGRSGRLLDD---PHRGHVERFNDYVDDLAAFWQQEIQPG--PYRKRYALAHSMGGAI 144 (330)
T ss_pred HCCCeEEEEcCCCCCCCCCCCCC---CCcCccccHHHHHHHHHHHHHHHHhcC--CCCCeEEEEEcHHHHH
Confidence 358899999999 9999653211 111112377888999999998876543 2469999999999988
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=94.97 E-value=0.062 Score=49.68 Aligned_cols=66 Identities=12% Similarity=0.156 Sum_probs=46.3
Q ss_pred HHHhhhhc---CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKF---NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~---~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..+++.+ |-.++++.+| +|.|.+.. . +.+ +...-+.|+..++..+++.+ +..|++++|.|.||++
T Consensus 41 ~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~--~~~-----~~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~i 110 (276)
T PHA02857 41 YEELAENISSLGILVFSHDHIGHGRSNGEK-M--MID-----DFGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATI 110 (276)
T ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCCCcc-C--CcC-----CHHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHH
Confidence 34444444 7789999999 99997631 1 222 34455778878777776544 3578999999999988
No 12
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=94.77 E-value=0.06 Score=53.72 Aligned_cols=66 Identities=18% Similarity=0.394 Sum_probs=49.6
Q ss_pred HHHhhhhc---CCcEEEEEee-eccCccCccccCCccccCCC-ChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhh
Q 044064 83 LLDIAPKF---NASLVFIEIL-WGINAIWEDSYKSAETLGYL-NSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGR 157 (338)
Q Consensus 83 ~~~lA~~~---~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yL-t~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~Ga 157 (338)
+..+|+.+ |-.++++.+| ||.|.... .|. +.++..+|+..+++.++.++. ..|++++|.|+||.
T Consensus 152 ~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~---------~~~~~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ 220 (395)
T PLN02652 152 YLHFAKQLTSCGFGVYAMDWIGHGGSDGLH---------GYVPSLDYVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGA 220 (395)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---------CCCcCHHHHHHHHHHHHHHHHHhCC--CCCEEEEEECHHHH
Confidence 33444433 6799999999 99986421 122 467888999999999987643 46999999999998
Q ss_pred cc
Q 044064 158 LM 159 (338)
Q Consensus 158 L~ 159 (338)
+.
T Consensus 221 ia 222 (395)
T PLN02652 221 VV 222 (395)
T ss_pred HH
Confidence 83
No 13
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=94.73 E-value=0.038 Score=52.43 Aligned_cols=55 Identities=24% Similarity=0.305 Sum_probs=40.3
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--||++++| ||.|.+-... . . .+.++..+|+..+++.++ ..+++++|+||||++
T Consensus 53 ~~~vi~~D~~G~G~S~~~~~~---~-~---~~~~~~~~dl~~l~~~l~------~~~~~lvG~S~GG~i 108 (306)
T TIGR01249 53 TYRIVLFDQRGCGKSTPHACL---E-E---NTTWDLVADIEKLREKLG------IKNWLVFGGSWGSTL 108 (306)
T ss_pred CCEEEEECCCCCCCCCCCCCc---c-c---CCHHHHHHHHHHHHHHcC------CCCEEEEEECHHHHH
Confidence 5679999999 9999753221 1 1 356777788877766543 247999999999988
No 14
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=94.66 E-value=0.042 Score=48.30 Aligned_cols=54 Identities=20% Similarity=0.327 Sum_probs=35.4
Q ss_pred EEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 94 LVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 94 vv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
||.+-.| +|.|.|-.. ..+...+ ..|+++.+..+.+.++. .+++++|+||||++
T Consensus 3 vi~~d~rG~g~S~~~~~-----~~~~~~~----~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~ 57 (230)
T PF00561_consen 3 VILFDLRGFGYSSPHWD-----PDFPDYT----TDDLAADLEALREALGI--KKINLVGHSMGGML 57 (230)
T ss_dssp EEEEECTTSTTSSSCCG-----SGSCTHC----HHHHHHHHHHHHHHHTT--SSEEEEEETHHHHH
T ss_pred EEEEeCCCCCCCCCCcc-----CCccccc----HHHHHHHHHHHHHHhCC--CCeEEEEECCChHH
Confidence 6788899 999997100 0112233 45555555555555554 34999999999999
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=94.59 E-value=0.048 Score=48.59 Aligned_cols=54 Identities=17% Similarity=0.092 Sum_probs=42.0
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+-.++.+++| +|.|..-.. .-.+.++..+|+..|++.++ ..|++++|.|+||++
T Consensus 39 ~~~vi~~D~~G~G~S~~~~~--------~~~~~~~~~~~~~~~i~~~~------~~~~~l~G~S~Gg~~ 93 (257)
T TIGR03611 39 RFHVVTYDHRGTGRSPGELP--------PGYSIAHMADDVLQLLDALN------IERFHFVGHALGGLI 93 (257)
T ss_pred ccEEEEEcCCCCCCCCCCCc--------ccCCHHHHHHHHHHHHHHhC------CCcEEEEEechhHHH
Confidence 6799999999 999964211 11467888889988887654 247999999999987
No 16
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=94.54 E-value=0.072 Score=46.63 Aligned_cols=55 Identities=25% Similarity=0.381 Sum_probs=38.8
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhh-HHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALAD-DAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD-~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+-.++.+++| ||.|.... .....+.++.+.| +..+++.+ ...|++++|.|+||++
T Consensus 27 ~~~v~~~d~~g~G~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~i 83 (251)
T TIGR03695 27 HFRCLAIDLPGHGSSQSPD-------EIERYDFEEAAQDILATLLDQL------GIEPFFLVGYSMGGRI 83 (251)
T ss_pred cCeEEEEcCCCCCCCCCCC-------ccChhhHHHHHHHHHHHHHHHc------CCCeEEEEEeccHHHH
Confidence 7889999999 99984321 2233566777767 55554433 2368999999999998
No 17
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=94.52 E-value=0.049 Score=47.91 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=41.5
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhccc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRLMC 160 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL~C 160 (338)
+-.++.+++| +|+|.+. . ...+.++-.+|+..+++.++. .|++++|.|+||++..
T Consensus 39 ~~~v~~~d~~G~G~s~~~-~--------~~~~~~~~~~~~~~~i~~~~~------~~v~liG~S~Gg~~a~ 94 (251)
T TIGR02427 39 DFRVLRYDKRGHGLSDAP-E--------GPYSIEDLADDVLALLDHLGI------ERAVFCGLSLGGLIAQ 94 (251)
T ss_pred ccEEEEecCCCCCCCCCC-C--------CCCCHHHHHHHHHHHHHHhCC------CceEEEEeCchHHHHH
Confidence 6789999999 9998432 1 124677778888888776532 4799999999999843
No 18
>PRK10566 esterase; Provisional
Probab=94.46 E-value=0.055 Score=49.23 Aligned_cols=71 Identities=17% Similarity=0.096 Sum_probs=46.7
Q ss_pred HhhhhcCCcEEEEEee-eccCccCccccCCccccCC--CChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhccc
Q 044064 85 DIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGY--LNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRLMC 160 (338)
Q Consensus 85 ~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~y--Lt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL~C 160 (338)
.+++ .|-.++.+++| +|.|.+- + ....+.. =...++++|++.++..+++.......+++++|.|+||.+..
T Consensus 49 ~l~~-~G~~v~~~d~~g~G~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al 122 (249)
T PRK10566 49 ALAQ-AGFRVIMPDAPMHGARFSG-D---EARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTAL 122 (249)
T ss_pred HHHh-CCCEEEEecCCcccccCCC-c---cccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHH
Confidence 3443 37789999999 9986431 1 1122211 01346778888888888765333457999999999998843
No 19
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=94.18 E-value=0.087 Score=47.34 Aligned_cols=73 Identities=22% Similarity=0.173 Sum_probs=51.8
Q ss_pred HHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..+|++.|..||+.+.| +|.+...-+.+ ....-.. ......|+..+++.+++++.....+++++|.|.||.+
T Consensus 35 ~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~ 108 (212)
T TIGR01840 35 WKAAADRYGFVLVAPEQTSYNSSNNCWDWF-FTHHRAR--GTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGM 108 (212)
T ss_pred hHHHHHhCCeEEEecCCcCccccCCCCCCC-CccccCC--CCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHH
Confidence 567888999999999999 88654321111 1110000 1245788889999999887666679999999999987
No 20
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=94.14 E-value=0.097 Score=50.20 Aligned_cols=60 Identities=12% Similarity=0.211 Sum_probs=47.0
Q ss_pred hcCCcEEEEEee-eccCcc-CccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 89 KFNASLVFIEIL-WGINAI-WEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 89 ~~~Alvv~lEHR-YG~S~P-~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+-|-.|+++.|| .|.|.. ... ..++ -++-.+|+..|++.++.+. .+.|++++|+|.||.+
T Consensus 59 ~~G~~V~~~D~RGhG~S~r~~rg---~~~~-----f~~~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~I 120 (298)
T COG2267 59 ARGFDVYALDLRGHGRSPRGQRG---HVDS-----FADYVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLI 120 (298)
T ss_pred hCCCEEEEecCCCCCCCCCCCcC---Cchh-----HHHHHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHH
Confidence 337889999999 999973 211 1222 5788899999999988763 4689999999999998
No 21
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=93.71 E-value=0.13 Score=48.07 Aligned_cols=66 Identities=17% Similarity=0.148 Sum_probs=48.6
Q ss_pred HHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..|++. .-+|++..| ||.|.+.+.. ..+.-...+.++-..|++.|++.+. -.|++++|.|.||++
T Consensus 49 ~~~L~~~--~~vi~~DlpG~G~S~~~~~~--~~~~~~~~~~~~~a~~l~~~l~~l~------~~~~~lvGhS~Gg~v 115 (294)
T PLN02824 49 TPVLAKS--HRVYAIDLLGYGYSDKPNPR--SAPPNSFYTFETWGEQLNDFCSDVV------GDPAFVICNSVGGVV 115 (294)
T ss_pred HHHHHhC--CeEEEEcCCCCCCCCCCccc--cccccccCCHHHHHHHHHHHHHHhc------CCCeEEEEeCHHHHH
Confidence 4456665 489999999 9999764321 1122245688888889999988664 158999999999988
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=93.43 E-value=0.12 Score=47.08 Aligned_cols=60 Identities=18% Similarity=0.096 Sum_probs=42.7
Q ss_pred HHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
...|++ +..++++.+| +|.|.+-... -.|.+...+|++.+++.+. ..|++++|.|+||++
T Consensus 48 ~~~l~~--~~~vi~~D~~G~G~S~~~~~~--------~~~~~~~~~~l~~~i~~~~------~~~~~lvG~S~Gg~~ 108 (278)
T TIGR03056 48 MPPLAR--SFRVVAPDLPGHGFTRAPFRF--------RFTLPSMAEDLSALCAAEG------LSPDGVIGHSAGAAI 108 (278)
T ss_pred HHHHhh--CcEEEeecCCCCCCCCCcccc--------CCCHHHHHHHHHHHHHHcC------CCCceEEEECccHHH
Confidence 445555 3689999999 9998753220 1356777778887776432 257899999999998
No 23
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=93.30 E-value=0.17 Score=54.65 Aligned_cols=76 Identities=26% Similarity=0.312 Sum_probs=52.0
Q ss_pred HHHhhhhc---CCcEEEEEee-eccCccCccccC----CccccCCCC----------hhhhhhhHHHHHHHHh------h
Q 044064 83 LLDIAPKF---NASLVFIEIL-WGINAIWEDSYK----SAETLGYLN----------SQQALADDAVLIRSLK------Q 138 (338)
Q Consensus 83 ~~~lA~~~---~Alvv~lEHR-YG~S~P~~~~~~----s~~nL~yLt----------~~QALaD~a~Fi~~~k------~ 138 (338)
+..+|+.+ |-.+|.+.|| +|+|..-.+.-. +..-+.|++ .+|++.|+..++..++ .
T Consensus 465 ~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~ 544 (792)
T TIGR03502 465 ALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGA 544 (792)
T ss_pred HHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhccccccc
Confidence 44555554 4568999999 999943211000 122244544 4999999999999998 2
Q ss_pred hc----CCCCCCEEEEcccchhhc
Q 044064 139 NL----SSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 139 ~~----~~~~~pwI~~GGSY~GaL 158 (338)
++ ..+..||..+|+|.||.+
T Consensus 545 ~~~~~~~~~~~~V~~lGHSLGgii 568 (792)
T TIGR03502 545 PLSGINVIDGSKVSFLGHSLGGIV 568 (792)
T ss_pred ccccccCCCCCcEEEEecCHHHHH
Confidence 21 134679999999999988
No 24
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=93.14 E-value=0.2 Score=47.04 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=39.5
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
|=.++.+++| +|.|.+... ...|.++..+|+..+++.+. ...+++++|.||||++
T Consensus 45 g~~vi~~dl~g~G~s~~~~~--------~~~~~~~~~~~l~~~i~~l~-----~~~~v~lvGhS~GG~v 100 (273)
T PLN02211 45 GYKVTCIDLKSAGIDQSDAD--------SVTTFDEYNKPLIDFLSSLP-----ENEKVILVGHSAGGLS 100 (273)
T ss_pred CCEEEEecccCCCCCCCCcc--------cCCCHHHHHHHHHHHHHhcC-----CCCCEEEEEECchHHH
Confidence 5689999999 998754211 12456666677777766432 1368999999999998
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=93.07 E-value=0.12 Score=46.38 Aligned_cols=52 Identities=19% Similarity=0.294 Sum_probs=39.7
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--+++++.| ||.|.+-. .. +.++..+|+..+++.. ...|++++|.|+||.+
T Consensus 27 ~~~vi~~D~~G~G~S~~~~-----~~-----~~~~~~~~l~~~l~~~------~~~~~~lvG~S~Gg~v 79 (242)
T PRK11126 27 DYPRLYIDLPGHGGSAAIS-----VD-----GFADVSRLLSQTLQSY------NILPYWLVGYSLGGRI 79 (242)
T ss_pred CCCEEEecCCCCCCCCCcc-----cc-----CHHHHHHHHHHHHHHc------CCCCeEEEEECHHHHH
Confidence 5689999999 99986521 11 5667778888777643 2369999999999988
No 26
>PRK00870 haloalkane dehalogenase; Provisional
Probab=93.00 E-value=0.19 Score=47.33 Aligned_cols=63 Identities=8% Similarity=0.134 Sum_probs=42.6
Q ss_pred HHHhhhhc---CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKF---NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~---~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..+++.+ |--+|++.+| ||+|.+.+.. .-.+.++..+|++.|++++. ..|++++|.|+||++
T Consensus 62 w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~-------~~~~~~~~a~~l~~~l~~l~------~~~v~lvGhS~Gg~i 128 (302)
T PRK00870 62 YRKMIPILAAAGHRVIAPDLIGFGRSDKPTRR-------EDYTYARHVEWMRSWFEQLD------LTDVTLVCQDWGGLI 128 (302)
T ss_pred HHHHHHHHHhCCCEEEEECCCCCCCCCCCCCc-------ccCCHHHHHHHHHHHHHHcC------CCCEEEEEEChHHHH
Confidence 33444433 5689999999 9999764221 11245666677777766432 247999999999988
No 27
>PRK10673 acyl-CoA esterase; Provisional
Probab=92.82 E-value=0.19 Score=45.42 Aligned_cols=58 Identities=16% Similarity=0.213 Sum_probs=43.6
Q ss_pred HHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
...|++. --+|+++.| +|+|.+.+. +|.++-.+|+..+++.+. ..+++++|.|.||++
T Consensus 36 ~~~l~~~--~~vi~~D~~G~G~s~~~~~----------~~~~~~~~d~~~~l~~l~------~~~~~lvGhS~Gg~v 94 (255)
T PRK10673 36 ARDLVND--HDIIQVDMRNHGLSPRDPV----------MNYPAMAQDLLDTLDALQ------IEKATFIGHSMGGKA 94 (255)
T ss_pred HHHHhhC--CeEEEECCCCCCCCCCCCC----------CCHHHHHHHHHHHHHHcC------CCceEEEEECHHHHH
Confidence 3344443 489999999 999976322 467777889999887653 146999999999998
No 28
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=92.51 E-value=0.22 Score=50.70 Aligned_cols=61 Identities=16% Similarity=0.253 Sum_probs=47.8
Q ss_pred CCcEEEEE-ee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCC-CCCCEEEEcccchhhc
Q 044064 91 NASLVFIE-IL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSS-DSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lE-HR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~-~~~pwI~~GGSY~GaL 158 (338)
.|.+|+++ ++ -|.|...... .-.+.+|+.+|+..|++.+-+.+.. .+.|+.++|.||||..
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~~-------~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y 184 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKAD-------YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHY 184 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCCC-------CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhh
Confidence 48899999 68 9988763211 1245699999999999988776643 5689999999999987
No 29
>PLN02511 hydrolase
Probab=92.17 E-value=0.25 Score=49.04 Aligned_cols=64 Identities=13% Similarity=0.110 Sum_probs=47.9
Q ss_pred hhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhcccc
Q 044064 87 APKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRLMCK 161 (338)
Q Consensus 87 A~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL~C~ 161 (338)
+.+.|--+|++.+| +|.|..... ++. ...-.+|+..++++++..+. +.|++++|.|.||++.+.
T Consensus 125 ~~~~g~~vv~~d~rG~G~s~~~~~--------~~~-~~~~~~Dl~~~i~~l~~~~~--~~~~~lvG~SlGg~i~~~ 189 (388)
T PLN02511 125 ARSKGWRVVVFNSRGCADSPVTTP--------QFY-SASFTGDLRQVVDHVAGRYP--SANLYAAGWSLGANILVN 189 (388)
T ss_pred HHHCCCEEEEEecCCCCCCCCCCc--------CEE-cCCchHHHHHHHHHHHHHCC--CCCEEEEEechhHHHHHH
Confidence 34568899999999 999865311 111 23446799999999998763 579999999999988443
No 30
>PLN02965 Probable pheophorbidase
Probab=92.06 E-value=0.31 Score=44.72 Aligned_cols=55 Identities=18% Similarity=0.169 Sum_probs=38.9
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--++++.+| +|+|-.... ...|.++-.+|+..+++.+.. ..|++++|.|+||++
T Consensus 30 ~~~via~Dl~G~G~S~~~~~--------~~~~~~~~a~dl~~~l~~l~~-----~~~~~lvGhSmGG~i 85 (255)
T PLN02965 30 GFKSTCVDLTGAGISLTDSN--------TVSSSDQYNRPLFALLSDLPP-----DHKVILVGHSIGGGS 85 (255)
T ss_pred CceEEEecCCcCCCCCCCcc--------ccCCHHHHHHHHHHHHHhcCC-----CCCEEEEecCcchHH
Confidence 4579999999 999942111 124466666778888765431 148999999999987
No 31
>PRK05855 short chain dehydrogenase; Validated
Probab=91.89 E-value=0.2 Score=51.24 Aligned_cols=56 Identities=13% Similarity=0.154 Sum_probs=43.4
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--|+++++| +|.|.+.... +-.|.++..+|++.+++.++. ..|++++|.|+||++
T Consensus 51 ~~~Vi~~D~~G~G~S~~~~~~-------~~~~~~~~a~dl~~~i~~l~~-----~~~~~lvGhS~Gg~~ 107 (582)
T PRK05855 51 RFRVVAYDVRGAGRSSAPKRT-------AAYTLARLADDFAAVIDAVSP-----DRPVHLLAHDWGSIQ 107 (582)
T ss_pred ceEEEEecCCCCCCCCCCCcc-------cccCHHHHHHHHHHHHHHhCC-----CCcEEEEecChHHHH
Confidence 4579999999 9999753221 125788889999999987642 357999999999976
No 32
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=91.87 E-value=0.4 Score=45.76 Aligned_cols=66 Identities=15% Similarity=0.314 Sum_probs=49.7
Q ss_pred hHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 82 FLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 82 ~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..+|......-++++.-| -|+|+--+.. . |+.|--..|+...++ +-|.....|+|++|+|.|||+
T Consensus 93 ~a~el~s~~~~r~~a~DlRgHGeTk~~~e~--d------lS~eT~~KD~~~~i~---~~fge~~~~iilVGHSmGGaI 159 (343)
T KOG2564|consen 93 FASELKSKIRCRCLALDLRGHGETKVENED--D------LSLETMSKDFGAVIK---ELFGELPPQIILVGHSMGGAI 159 (343)
T ss_pred HHHHHHhhcceeEEEeeccccCccccCChh--h------cCHHHHHHHHHHHHH---HHhccCCCceEEEeccccchh
Confidence 3457777777888999999 9999876433 1 666666788776544 445555689999999999998
No 33
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=91.79 E-value=0.23 Score=45.74 Aligned_cols=55 Identities=11% Similarity=0.066 Sum_probs=36.9
Q ss_pred cCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 90 FNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 90 ~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.|--+|++.+| +|.|.+.... ... +... ..|+..|++.+. ..+++++|.|+||++
T Consensus 59 ~~~~vi~~D~~G~G~S~~~~~~--~~~-----~~~~-~~~l~~~l~~l~------~~~~~lvG~S~Gg~i 114 (282)
T TIGR03343 59 AGYRVILKDSPGFNKSDAVVMD--EQR-----GLVN-ARAVKGLMDALD------IEKAHLVGNSMGGAT 114 (282)
T ss_pred CCCEEEEECCCCCCCCCCCcCc--ccc-----cchh-HHHHHHHHHHcC------CCCeeEEEECchHHH
Confidence 37899999999 9999764211 010 1111 356666666542 258999999999988
No 34
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=90.95 E-value=0.13 Score=45.85 Aligned_cols=69 Identities=17% Similarity=0.157 Sum_probs=47.6
Q ss_pred HHhhhhcCCcEEEEEee-ec-cCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 84 LDIAPKFNASLVFIEIL-WG-INAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 84 ~~lA~~~~Alvv~lEHR-YG-~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
..+-.+.|-.|+.+..| -+ .+..+.. .++.-.-.+.+.|+...++++.++...+..++.++|+||||.+
T Consensus 7 ~~~la~~Gy~v~~~~~rGs~g~g~~~~~------~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~ 77 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGSGGYGKDFHE------AGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYL 77 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTSSSSHHHHHH------TTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHH
T ss_pred HHHHHhCCEEEEEEcCCCCCccchhHHH------hhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccc
Confidence 34444569999999999 43 3444322 1222335677999999999998776555679999999999987
No 35
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=90.83 E-value=0.34 Score=44.90 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=38.4
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--+|++.+| ||+|..- .. . .+.+.-.+|+..|++.+. -.|++++|.|+||++
T Consensus 51 ~~~vi~~Dl~G~G~S~~~-~~-------~-~~~~~~~~~~~~~i~~l~------~~~~~LvG~S~GG~v 104 (276)
T TIGR02240 51 DLEVIAFDVPGVGGSSTP-RH-------P-YRFPGLAKLAARMLDYLD------YGQVNAIGVSWGGAL 104 (276)
T ss_pred CceEEEECCCCCCCCCCC-CC-------c-CcHHHHHHHHHHHHHHhC------cCceEEEEECHHHHH
Confidence 3589999999 9999642 11 1 245555577777777653 147999999999998
No 36
>PRK10985 putative hydrolase; Provisional
Probab=90.74 E-value=0.5 Score=45.39 Aligned_cols=60 Identities=20% Similarity=0.195 Sum_probs=43.3
Q ss_pred hhhcCCcEEEEEee-eccCccC-ccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 87 APKFNASLVFIEIL-WGINAIW-EDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 87 A~~~~Alvv~lEHR-YG~S~P~-~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
..+.|-.++...+| +|.|... ... .+.. .++|+..+++.+++.+. ..|++++|.|.||.+
T Consensus 83 l~~~G~~v~~~d~rG~g~~~~~~~~~---------~~~~-~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i 144 (324)
T PRK10985 83 AQKRGWLGVVMHFRGCSGEPNRLHRI---------YHSG-ETEDARFFLRWLQREFG--HVPTAAVGYSLGGNM 144 (324)
T ss_pred HHHCCCEEEEEeCCCCCCCccCCcce---------ECCC-chHHHHHHHHHHHHhCC--CCCEEEEEecchHHH
Confidence 34557789999999 9976321 111 1112 26899999999987764 468999999999976
No 37
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=90.61 E-value=0.58 Score=43.85 Aligned_cols=57 Identities=14% Similarity=0.047 Sum_probs=44.4
Q ss_pred cCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 90 FNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 90 ~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.|-.++.++.| +|+|.+. . .+.++..+|+..+++.+++... .-.+++++|.|.||.+
T Consensus 56 ~G~~v~~~Dl~G~G~S~~~------~-----~~~~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~ 113 (274)
T TIGR03100 56 AGFPVLRFDYRGMGDSEGE------N-----LGFEGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASA 113 (274)
T ss_pred CCCEEEEeCCCCCCCCCCC------C-----CCHHHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHH
Confidence 37799999999 9998642 1 1356778999999999987642 1246999999999987
No 38
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=90.28 E-value=0.22 Score=49.60 Aligned_cols=40 Identities=33% Similarity=0.499 Sum_probs=29.5
Q ss_pred hhhhhHHHHHHHHhhhcCCC--CCCEEEEcccchhhc--cccccc
Q 044064 124 QALADDAVLIRSLKQNLSSD--SSPFVVFGGSYGGRL--MCKIID 164 (338)
Q Consensus 124 QALaD~a~Fi~~~k~~~~~~--~~pwI~~GGSY~GaL--~C~~i~ 164 (338)
||| |+..-+.++++.+... +.|+|.+||||||-| +|..+.
T Consensus 162 qAi-D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~a 205 (403)
T PF11144_consen 162 QAI-DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIA 205 (403)
T ss_pred HHH-HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhC
Confidence 453 6666677777776432 359999999999988 787654
No 39
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=90.11 E-value=0.67 Score=43.82 Aligned_cols=64 Identities=20% Similarity=0.095 Sum_probs=47.2
Q ss_pred HHHhhhh---cCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPK---FNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~---~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..+|+. .|=.++.+.+| ||+|..- . .. .+.++.++|+...++.+++. . ..|++++|.|.||.+
T Consensus 45 ~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~--~--~~-----~~~~~~~~Dv~~ai~~L~~~-~--~~~v~LvG~SmGG~v 112 (266)
T TIGR03101 45 VALQARAFAAGGFGVLQIDLYGCGDSAGD--F--AA-----ARWDVWKEDVAAAYRWLIEQ-G--HPPVTLWGLRLGALL 112 (266)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCCc--c--cc-----CCHHHHHHHHHHHHHHHHhc-C--CCCEEEEEECHHHHH
Confidence 3344554 36789999999 9998632 1 11 24567789999998888764 2 469999999999988
No 40
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=90.01 E-value=0.4 Score=41.97 Aligned_cols=40 Identities=15% Similarity=0.063 Sum_probs=28.0
Q ss_pred cceEEEeCCCCCCCcccccccc---CCCCceEEEcCCCccccc
Q 044064 271 GSNIIFSNGMQDPWSRGGVLKN---ISASIIALVTKKGAHHVD 310 (338)
Q Consensus 271 asnIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g~aHc~D 310 (338)
...+++++|+.|+......... .-++...+++++++|..-
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 230 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPF 230 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCcc
Confidence 3569999999999876543322 223455678999999844
No 41
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=89.99 E-value=0.3 Score=43.16 Aligned_cols=62 Identities=29% Similarity=0.264 Sum_probs=47.7
Q ss_pred chHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhh---cCCCCCCEEEEcccchh
Q 044064 81 GFLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQN---LSSDSSPFVVFGGSYGG 156 (338)
Q Consensus 81 g~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~---~~~~~~pwI~~GGSY~G 156 (338)
.+...+|++.|..++.++.| .-+. + ..+++.|+...++++.++ +..+..+++++|-|-||
T Consensus 19 ~~~~~la~~~g~~v~~~~Yrl~p~~-~---------------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg 82 (211)
T PF07859_consen 19 PFAARLAAERGFVVVSIDYRLAPEA-P---------------FPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGG 82 (211)
T ss_dssp HHHHHHHHHHTSEEEEEE---TTTS-S---------------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHH
T ss_pred HHHHHHHhhccEEEEEeeccccccc-c---------------ccccccccccceeeeccccccccccccceEEeeccccc
Confidence 45678899899999999999 6321 1 357889999999998876 44455799999999999
Q ss_pred hc
Q 044064 157 RL 158 (338)
Q Consensus 157 aL 158 (338)
.|
T Consensus 83 ~l 84 (211)
T PF07859_consen 83 HL 84 (211)
T ss_dssp HH
T ss_pred ch
Confidence 88
No 42
>PRK03592 haloalkane dehalogenase; Provisional
Probab=89.53 E-value=0.59 Score=43.67 Aligned_cols=60 Identities=13% Similarity=0.129 Sum_probs=44.3
Q ss_pred hHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 82 FLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 82 ~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
++..|++.+ -+|++..| ||.|.+.+. .| +.+.-.+|+..+++.++ ..|++++|.|.||.+
T Consensus 46 ~~~~L~~~~--~via~D~~G~G~S~~~~~--------~~-~~~~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~i 106 (295)
T PRK03592 46 IIPHLAGLG--RCLAPDLIGMGASDKPDI--------DY-TFADHARYLDAWFDALG------LDDVVLVGHDWGSAL 106 (295)
T ss_pred HHHHHhhCC--EEEEEcCCCCCCCCCCCC--------CC-CHHHHHHHHHHHHHHhC------CCCeEEEEECHHHHH
Confidence 345666664 89999999 999965311 12 56666688888887654 258999999999988
No 43
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=88.69 E-value=0.67 Score=46.35 Aligned_cols=70 Identities=16% Similarity=0.213 Sum_probs=55.1
Q ss_pred HHHhhhhcCCcEEEEEee-eccCccC-ccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhccc
Q 044064 83 LLDIAPKFNASLVFIEIL-WGINAIW-EDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRLMC 160 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR-YG~S~P~-~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL~C 160 (338)
+...|++-|=-+|++-|| =|.|.-+ +.+| -+-. ..|+.++++++++.|. .+|..++|-|+||++++
T Consensus 146 lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f------~ag~----t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~ 213 (409)
T KOG1838|consen 146 LVHEAQRKGYRVVVFNHRGLGGSKLTTPRLF------TAGW----TEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILT 213 (409)
T ss_pred HHHHHHhCCcEEEEECCCCCCCCccCCCcee------ecCC----HHHHHHHHHHHHHhCC--CCceEEEEecchHHHHH
Confidence 567789999999999999 8877765 2221 1111 3899999999999885 57999999999999977
Q ss_pred cccc
Q 044064 161 KIID 164 (338)
Q Consensus 161 ~~i~ 164 (338)
..+-
T Consensus 214 nYLG 217 (409)
T KOG1838|consen 214 NYLG 217 (409)
T ss_pred HHhh
Confidence 6663
No 44
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=88.35 E-value=0.69 Score=47.99 Aligned_cols=62 Identities=16% Similarity=0.059 Sum_probs=46.4
Q ss_pred HhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 85 DIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 85 ~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.+|++ |=.+|...+| +|+|--... .++ .+-.+|+..+|++++++- ..+.++.++|.||||.+
T Consensus 48 ~l~~~-Gy~vv~~D~RG~g~S~g~~~---------~~~-~~~~~D~~~~i~~l~~q~-~~~~~v~~~G~S~GG~~ 110 (550)
T TIGR00976 48 WFVAQ-GYAVVIQDTRGRGASEGEFD---------LLG-SDEAADGYDLVDWIAKQP-WCDGNVGMLGVSYLAVT 110 (550)
T ss_pred HHHhC-CcEEEEEeccccccCCCceE---------ecC-cccchHHHHHHHHHHhCC-CCCCcEEEEEeChHHHH
Confidence 34444 9999999999 999863211 122 467799999999998652 23469999999999987
No 45
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=87.66 E-value=0.64 Score=44.89 Aligned_cols=52 Identities=15% Similarity=0.167 Sum_probs=36.6
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--||++.+| +|.|.+. . .+.+.-.+|++.|++.+.. +.+++++|.|+||++
T Consensus 99 ~~~Vi~~Dl~G~g~s~~~-~----------~~~~~~a~dl~~ll~~l~l-----~~~~~lvG~SmGG~v 151 (343)
T PRK08775 99 RFRLLAFDFIGADGSLDV-P----------IDTADQADAIALLLDALGI-----ARLHAFVGYSYGALV 151 (343)
T ss_pred ccEEEEEeCCCCCCCCCC-C----------CCHHHHHHHHHHHHHHcCC-----CcceEEEEECHHHHH
Confidence 4579999999 9988432 1 1234446788888776531 234689999999988
No 46
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=87.57 E-value=0.92 Score=44.30 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=39.5
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--+|++.+| ||+|.+.++ .. .+.+.-.+|+..|++.+. ..|++++|.|+||.+
T Consensus 114 ~~~via~Dl~G~G~S~~~~~-------~~-~~~~~~a~~l~~~l~~l~------~~~~~lvGhS~Gg~i 168 (360)
T PLN02679 114 NYTVYAIDLLGFGASDKPPG-------FS-YTMETWAELILDFLEEVV------QKPTVLIGNSVGSLA 168 (360)
T ss_pred CCEEEEECCCCCCCCCCCCC-------cc-ccHHHHHHHHHHHHHHhc------CCCeEEEEECHHHHH
Confidence 5689999999 999965322 12 256666678888877542 258999999999976
No 47
>PRK03204 haloalkane dehalogenase; Provisional
Probab=86.89 E-value=0.98 Score=42.43 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=34.6
Q ss_pred CcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 92 ASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 92 Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
--+|++.+| ||.|..-.+. . .+.+.-.+|+..+++. +. ..+++++|.|+||++
T Consensus 61 ~~vi~~D~~G~G~S~~~~~~-------~-~~~~~~~~~~~~~~~~----~~--~~~~~lvG~S~Gg~v 114 (286)
T PRK03204 61 FRCVAPDYLGFGLSERPSGF-------G-YQIDEHARVIGEFVDH----LG--LDRYLSMGQDWGGPI 114 (286)
T ss_pred cEEEEECCCCCCCCCCCCcc-------c-cCHHHHHHHHHHHHHH----hC--CCCEEEEEECccHHH
Confidence 579999999 9998642211 1 2344444455555443 33 257999999999987
No 48
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=86.74 E-value=0.91 Score=40.67 Aligned_cols=66 Identities=12% Similarity=0.186 Sum_probs=44.8
Q ss_pred ceEEEeCCCCCCCccccccc-------cCCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhh
Q 044064 272 SNIIFSNGMQDPWSRGGVLK-------NISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWV 337 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~-------~~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl 337 (338)
.-+++..|+.||+....... .........+.||+.|..+-....+.|+..-.++.+++++.++++|
T Consensus 146 ~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 146 APVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred CCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 35899999999998866311 1244566788999999999888777888888889988888887765
No 49
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=85.74 E-value=1.3 Score=44.25 Aligned_cols=63 Identities=21% Similarity=0.292 Sum_probs=38.3
Q ss_pred HHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 84 LDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 84 ~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
..|++. -.|+++++| +|.|... +. .+-+.+++.++++.-+..+.+... ..|++++|.|+||.+
T Consensus 126 ~~L~~~--~~vi~~D~rG~G~S~~~-~~-------~~~~~~~~~~~~~~~i~~~~~~l~--~~~~~lvGhS~GG~l 189 (402)
T PLN02894 126 DALASR--FRVIAIDQLGWGGSSRP-DF-------TCKSTEETEAWFIDSFEEWRKAKN--LSNFILLGHSFGGYV 189 (402)
T ss_pred HHHHhC--CEEEEECCCCCCCCCCC-Cc-------ccccHHHHHHHHHHHHHHHHHHcC--CCCeEEEEECHHHHH
Confidence 345554 579999999 9998532 11 122345554444433333332332 248999999999998
No 50
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=85.58 E-value=2.3 Score=41.01 Aligned_cols=60 Identities=18% Similarity=0.235 Sum_probs=46.5
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
|-.++++.|| .|.|-=-... .. +.+-..+|+..|...++..-..++-|..++|.|.|||+
T Consensus 82 g~~v~a~D~~GhG~SdGl~~y---i~-----~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV 142 (313)
T KOG1455|consen 82 GFAVYAIDYEGHGRSDGLHAY---VP-----SFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAV 142 (313)
T ss_pred CCeEEEeeccCCCcCCCCccc---CC-----cHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHH
Confidence 7789999999 9999732111 12 24667899999999888655555689999999999998
No 51
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=85.32 E-value=1.2 Score=42.82 Aligned_cols=52 Identities=13% Similarity=0.163 Sum_probs=36.5
Q ss_pred CcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 92 ASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 92 Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
-.++.+++| +|.|.+... ..+.++..+|+..+++.+ . ..+++++|.|+||.+
T Consensus 158 ~~v~~~d~~g~G~s~~~~~---------~~~~~~~~~~~~~~~~~~----~--~~~~~lvG~S~Gg~~ 210 (371)
T PRK14875 158 RPVIALDLPGHGASSKAVG---------AGSLDELAAAVLAFLDAL----G--IERAHLVGHSMGGAV 210 (371)
T ss_pred CEEEEEcCCCCCCCCCCCC---------CCCHHHHHHHHHHHHHhc----C--CccEEEEeechHHHH
Confidence 578999999 999854311 124556666666665433 2 247999999999987
No 52
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=85.16 E-value=2.2 Score=39.85 Aligned_cols=72 Identities=22% Similarity=0.261 Sum_probs=56.6
Q ss_pred HHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhccccc
Q 044064 84 LDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRLMCKI 162 (338)
Q Consensus 84 ~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL~C~~ 162 (338)
.+.|.+-|=-|+..|-| =|+|.|... +...++|+ +=|..|++.-+..+++-. +..|-..+|+||||-++|-.
T Consensus 50 A~~a~~~Gf~Vlt~dyRG~g~S~p~~~---~~~~~~~~--DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 50 AAAAAKAGFEVLTFDYRGIGQSRPASL---SGSQWRYL--DWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred HHHhhccCceEEEEecccccCCCcccc---ccCccchh--hhhhcchHHHHHHHHhhC--CCCceEEeeccccceeeccc
Confidence 35566667789999999 999999733 34456665 568889998888888754 46899999999999998743
No 53
>PLN02578 hydrolase
Probab=84.99 E-value=1.5 Score=42.67 Aligned_cols=58 Identities=19% Similarity=0.311 Sum_probs=41.8
Q ss_pred HHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 84 LDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 84 ~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
..|++ +--++++..| +|.|-.-. ..| +.+.-.+|++.|++.+. ..|++++|+|+||.+
T Consensus 107 ~~l~~--~~~v~~~D~~G~G~S~~~~--------~~~-~~~~~a~~l~~~i~~~~------~~~~~lvG~S~Gg~i 165 (354)
T PLN02578 107 PELAK--KYKVYALDLLGFGWSDKAL--------IEY-DAMVWRDQVADFVKEVV------KEPAVLVGNSLGGFT 165 (354)
T ss_pred HHHhc--CCEEEEECCCCCCCCCCcc--------ccc-CHHHHHHHHHHHHHHhc------cCCeEEEEECHHHHH
Confidence 34454 3579999999 99885321 122 55666688888887764 258999999999987
No 54
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=84.75 E-value=2.3 Score=41.72 Aligned_cols=71 Identities=14% Similarity=0.296 Sum_probs=56.2
Q ss_pred hHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcC-CCCCCEEEEcccchhhcc
Q 044064 82 FLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLS-SDSSPFVVFGGSYGGRLM 159 (338)
Q Consensus 82 ~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~-~~~~pwI~~GGSY~GaL~ 159 (338)
-+.++|++.+|.+++.--| +|.|.= ..|.++-..|+..-+++++.+.. ......|++|.|-||+..
T Consensus 162 ~~~~~ak~~~aNvl~fNYpGVg~S~G------------~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vq 229 (365)
T PF05677_consen 162 WIQRFAKELGANVLVFNYPGVGSSTG------------PPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQ 229 (365)
T ss_pred HHHHHHHHcCCcEEEECCCccccCCC------------CCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHH
Confidence 4789999999999999999 998842 12356778888888999986543 344579999999999997
Q ss_pred ccccc
Q 044064 160 CKIID 164 (338)
Q Consensus 160 C~~i~ 164 (338)
+..+.
T Consensus 230 a~AL~ 234 (365)
T PF05677_consen 230 AEALK 234 (365)
T ss_pred HHHHH
Confidence 76543
No 55
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=84.51 E-value=0.98 Score=36.87 Aligned_cols=57 Identities=21% Similarity=0.310 Sum_probs=38.0
Q ss_pred hHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhcc
Q 044064 82 FLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRLM 159 (338)
Q Consensus 82 ~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL~ 159 (338)
+...+|++ |-.++.+++| .|.+.- .+ ..+++++++. +... ...+++++|.|.||.+.
T Consensus 18 ~~~~l~~~-G~~v~~~~~~~~~~~~~-------~~-----~~~~~~~~~~-------~~~~-~~~~i~l~G~S~Gg~~a 75 (145)
T PF12695_consen 18 LAEALAEQ-GYAVVAFDYPGHGDSDG-------AD-----AVERVLADIR-------AGYP-DPDRIILIGHSMGGAIA 75 (145)
T ss_dssp HHHHHHHT-TEEEEEESCTTSTTSHH-------SH-----HHHHHHHHHH-------HHHC-TCCEEEEEEETHHHHHH
T ss_pred HHHHHHHC-CCEEEEEecCCCCccch-------hH-----HHHHHHHHHH-------hhcC-CCCcEEEEEEccCcHHH
Confidence 45566777 9999999999 998722 11 2334444433 3222 44799999999999763
No 56
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=84.18 E-value=1.7 Score=43.31 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=42.2
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--+|+++.| ||.|.+-... ...-.|.++-..|+..|++.+.. .+++++|+|+||++
T Consensus 153 ~~~Via~DlpG~G~S~~p~~~-----~~~~ys~~~~a~~l~~~i~~l~~------~~~~LvG~s~GG~i 210 (383)
T PLN03084 153 NYHAIAFDWLGFGFSDKPQPG-----YGFNYTLDEYVSSLESLIDELKS------DKVSLVVQGYFSPP 210 (383)
T ss_pred CCEEEEECCCCCCCCCCCccc-----ccccCCHHHHHHHHHHHHHHhCC------CCceEEEECHHHHH
Confidence 5789999999 9998653221 00114678888899999887642 47999999999977
No 57
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=84.17 E-value=1.6 Score=42.22 Aligned_cols=65 Identities=17% Similarity=0.269 Sum_probs=51.3
Q ss_pred cchHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchh
Q 044064 80 TGFLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGG 156 (338)
Q Consensus 80 ~g~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~G 156 (338)
.++-.+||+++++-++.++-| =|.| |.- +. .+-+..-+|+..||..++... ...|+++.|+|.||
T Consensus 69 ~sv~k~Ls~~l~~~v~~vd~RnHG~S-p~~----~~-----h~~~~ma~dv~~Fi~~v~~~~--~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 69 RSVAKNLSRKLGRDVYAVDVRNHGSS-PKI----TV-----HNYEAMAEDVKLFIDGVGGST--RLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHhcccccCceEEEecccCCCC-ccc----cc-----cCHHHHHHHHHHHHHHccccc--ccCCceecccCcch
Confidence 456789999999999999999 9955 431 12 225666699999999988653 35799999999999
No 58
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=83.86 E-value=1.3 Score=39.48 Aligned_cols=61 Identities=21% Similarity=0.192 Sum_probs=40.7
Q ss_pred hHHHhhhhcCCc---EEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhh
Q 044064 82 FLLDIAPKFNAS---LVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGR 157 (338)
Q Consensus 82 ~~~~lA~~~~Al---vv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~Ga 157 (338)
....||+.+..- |+.+|+. .+...|.. -|+++..++++.-| +.... +.|.+++|.|+||.
T Consensus 15 ~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~-----------~si~~la~~y~~~I---~~~~~--~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 15 SYRPLARALPDDVIGVYGIEYPGRGDDEPPP-----------DSIEELASRYAEAI---RARQP--EGPYVLAGWSFGGI 78 (229)
T ss_dssp GGHHHHHHHTTTEEEEEEECSTTSCTTSHEE-----------SSHHHHHHHHHHHH---HHHTS--SSSEEEEEETHHHH
T ss_pred HHHHHHHhCCCCeEEEEEEecCCCCCCCCCC-----------CCHHHHHHHHHHHh---hhhCC--CCCeeehccCccHH
Confidence 457888888876 8888888 76333321 34666655555444 43322 34999999999999
Q ss_pred c
Q 044064 158 L 158 (338)
Q Consensus 158 L 158 (338)
|
T Consensus 79 l 79 (229)
T PF00975_consen 79 L 79 (229)
T ss_dssp H
T ss_pred H
Confidence 8
No 59
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=83.82 E-value=1.4 Score=43.36 Aligned_cols=62 Identities=27% Similarity=0.338 Sum_probs=44.6
Q ss_pred CCcEEEEEee--eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCC-CCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL--WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSS-DSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR--YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~-~~~pwI~~GGSY~GaL 158 (338)
.|.||+|+.= =|=|..... +-..-+.+|+..|+..|++.+=..+.. .+.|+.++|-||||-.
T Consensus 85 ~an~l~iD~PvGtGfS~~~~~------~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~y 149 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYGNDP------SDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHY 149 (415)
T ss_dssp TSEEEEE--STTSTT-EESSG------GGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHH
T ss_pred ccceEEEeecCceEEeecccc------ccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEcccccccc
Confidence 4788888854 666665322 225668899999999999988776643 5569999999999976
No 60
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=83.77 E-value=1.9 Score=39.84 Aligned_cols=61 Identities=25% Similarity=0.359 Sum_probs=41.0
Q ss_pred hhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 86 IAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 86 lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+=.+++-.|+.+|-| ||+|.=.+ |-+-| +|.+|-|| .++-..--.+++|.|+||-|-|||.
T Consensus 101 fy~~l~mnv~ivsYRGYG~S~Gsp----sE~GL-~lDs~avl-------dyl~t~~~~dktkivlfGrSlGGAv 162 (300)
T KOG4391|consen 101 FYVNLKMNVLIVSYRGYGKSEGSP----SEEGL-KLDSEAVL-------DYLMTRPDLDKTKIVLFGRSLGGAV 162 (300)
T ss_pred HHHHcCceEEEEEeeccccCCCCc----cccce-eccHHHHH-------HHHhcCccCCcceEEEEecccCCee
Confidence 346789999999999 99986431 12222 34444443 3333333346789999999999988
No 61
>PRK07581 hypothetical protein; Validated
Probab=82.54 E-value=2.3 Score=40.74 Aligned_cols=58 Identities=9% Similarity=-0.005 Sum_probs=34.4
Q ss_pred cceEEEeCCCCCCCcccccccc---CCCCceEEEcCC-CcccccCCCCCCCCcHHHHHHHHHHHHH
Q 044064 271 GSNIIFSNGMQDPWSRGGVLKN---ISASIIALVTKK-GAHHVDFRSKTKDDPDWLVELRRQEVEI 332 (338)
Q Consensus 271 asnIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g-~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~ 332 (338)
.-.++++.|+.|+......... .-+....++|++ ++|..-+ +.++.-.+..+..+.++
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~----~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGF----GQNPADIAFIDAALKEL 336 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccc----cCcHHHHHHHHHHHHHH
Confidence 3568999999998765432221 113445678898 8997543 34444444444444443
No 62
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=82.29 E-value=1 Score=41.99 Aligned_cols=19 Identities=37% Similarity=0.599 Sum_probs=16.4
Q ss_pred CCCCCEEEEcccchhhccc
Q 044064 142 SDSSPFVVFGGSYGGRLMC 160 (338)
Q Consensus 142 ~~~~pwI~~GGSY~GaL~C 160 (338)
..+.||..||+|+||+|.+
T Consensus 71 ~~d~P~alfGHSmGa~lAf 89 (244)
T COG3208 71 LLDAPFALFGHSMGAMLAF 89 (244)
T ss_pred cCCCCeeecccchhHHHHH
Confidence 4678999999999999943
No 63
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=81.77 E-value=3.4 Score=42.00 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=44.3
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..||++..| +|.|. +... .. +++.+-+|++.|++.+...+...-.++.++|.|.||.+
T Consensus 73 d~nVI~VDw~g~g~s~-y~~a---~~-----~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhI 132 (442)
T TIGR03230 73 SANVIVVDWLSRAQQH-YPTS---AA-----YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHV 132 (442)
T ss_pred CCEEEEEECCCcCCCC-Cccc---cc-----cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHH
Confidence 5789999999 99764 3221 11 23666688999999987665544578999999999988
No 64
>PRK10162 acetyl esterase; Provisional
Probab=81.50 E-value=2.4 Score=40.69 Aligned_cols=61 Identities=18% Similarity=0.133 Sum_probs=44.5
Q ss_pred hHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhh---hcCCCCCCEEEEcccchhh
Q 044064 82 FLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQ---NLSSDSSPFVVFGGSYGGR 157 (338)
Q Consensus 82 ~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~---~~~~~~~pwI~~GGSY~Ga 157 (338)
+...||++.|..||.++.| =.+ .|++ +++.|+...++++++ +++....++++.|.|.||.
T Consensus 103 ~~~~la~~~g~~Vv~vdYrlape-~~~p---------------~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~ 166 (318)
T PRK10162 103 IMRLLASYSGCTVIGIDYTLSPE-ARFP---------------QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAM 166 (318)
T ss_pred HHHHHHHHcCCEEEEecCCCCCC-CCCC---------------CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHH
Confidence 4567899899999999999 543 2321 256776666666654 3454557999999999999
Q ss_pred c
Q 044064 158 L 158 (338)
Q Consensus 158 L 158 (338)
|
T Consensus 167 l 167 (318)
T PRK10162 167 L 167 (318)
T ss_pred H
Confidence 8
No 65
>PLN02872 triacylglycerol lipase
Probab=81.30 E-value=2.4 Score=42.36 Aligned_cols=74 Identities=16% Similarity=0.040 Sum_probs=49.7
Q ss_pred chHHHhhhhcCCcEEEEEee-eccCccCcccc-CCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 81 GFLLDIAPKFNASLVFIEIL-WGINAIWEDSY-KSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 81 g~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~-~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
++...||++ |=-|+...-| .|.|..-...- .+.+-++|-=-++|..|+..+|+++.+. . ..|++++|.|.||++
T Consensus 98 sla~~La~~-GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~-~--~~~v~~VGhS~Gg~~ 173 (395)
T PLN02872 98 SLGFILADH-GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI-T--NSKIFIVGHSQGTIM 173 (395)
T ss_pred chHHHHHhC-CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc-c--CCceEEEEECHHHHH
Confidence 344456653 7788899999 98775422210 0122234433467788999999999753 2 368999999999988
No 66
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=77.82 E-value=3.5 Score=39.87 Aligned_cols=63 Identities=10% Similarity=0.082 Sum_probs=44.1
Q ss_pred chHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhh-hhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 81 GFLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQAL-ADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 81 g~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QAL-aD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.+...+++ .|-.++.+..| .|.|.. ..+.+.-. .|+...++.+++... ..|++++|.|+||++
T Consensus 85 ~~~~~L~~-~G~~V~~~D~~g~g~s~~------------~~~~~d~~~~~~~~~v~~l~~~~~--~~~i~lvGhS~GG~i 149 (350)
T TIGR01836 85 SLVRGLLE-RGQDVYLIDWGYPDRADR------------YLTLDDYINGYIDKCVDYICRTSK--LDQISLLGICQGGTF 149 (350)
T ss_pred hHHHHHHH-CCCeEEEEeCCCCCHHHh------------cCCHHHHHHHHHHHHHHHHHHHhC--CCcccEEEECHHHHH
Confidence 44555555 47789999999 987642 12344443 457777888887653 358999999999998
No 67
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=76.06 E-value=4.8 Score=47.49 Aligned_cols=60 Identities=22% Similarity=0.217 Sum_probs=41.2
Q ss_pred CcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 92 ASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 92 Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
--+|++.+| ||.|...+.. .....-...+.+...+|++.++++++ ..|++++|.|+||++
T Consensus 1398 ~rVi~~Dl~G~G~S~~~~~~-~~~~~~~~~si~~~a~~l~~ll~~l~------~~~v~LvGhSmGG~i 1458 (1655)
T PLN02980 1398 ARCISIDLPGHGGSKIQNHA-KETQTEPTLSVELVADLLYKLIEHIT------PGKVTLVGYSMGARI 1458 (1655)
T ss_pred CEEEEEcCCCCCCCCCcccc-ccccccccCCHHHHHHHHHHHHHHhC------CCCEEEEEECHHHHH
Confidence 479999999 9999654221 01111123567777777888876543 258999999999998
No 68
>PRK06489 hypothetical protein; Provisional
Probab=75.95 E-value=3.7 Score=39.86 Aligned_cols=61 Identities=13% Similarity=0.219 Sum_probs=35.0
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCE-EEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPF-VVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pw-I~~GGSY~GaL 158 (338)
+--||++..| +|.|....+. ...+..-.+.++..+|+..++ ...+.. .++ +++|.|+||++
T Consensus 105 ~~~Via~Dl~GhG~S~~p~~~--~~~~~~~~~~~~~a~~~~~~l---~~~lgi--~~~~~lvG~SmGG~v 167 (360)
T PRK06489 105 KYFIILPDGIGHGKSSKPSDG--LRAAFPRYDYDDMVEAQYRLV---TEGLGV--KHLRLILGTSMGGMH 167 (360)
T ss_pred CCEEEEeCCCCCCCCCCCCcC--CCCCCCcccHHHHHHHHHHHH---HHhcCC--CceeEEEEECHHHHH
Confidence 3578999999 9998643221 111111234555444554432 222322 355 68999999988
No 69
>PRK10349 carboxylesterase BioH; Provisional
Probab=75.43 E-value=3.6 Score=37.29 Aligned_cols=45 Identities=16% Similarity=0.072 Sum_probs=29.5
Q ss_pred hhhccceEEEeCCCCCCCcccccccc---CCCCceEEEcCCCcccccC
Q 044064 267 LKRFGSNIIFSNGMQDPWSRGGVLKN---ISASIIALVTKKGAHHVDF 311 (338)
Q Consensus 267 l~~~asnIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g~aHc~Dl 311 (338)
+++-.--+..+.|+.|+......... .-+....++||+++|..-+
T Consensus 192 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~ 239 (256)
T PRK10349 192 LQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFI 239 (256)
T ss_pred HhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccc
Confidence 33333469999999999875543222 2245566889999996443
No 70
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=74.80 E-value=3.8 Score=38.67 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=42.9
Q ss_pred hcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 89 KFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 89 ~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+-+..||++.-| ++.+ .+... . .+++..-+|++.|++.+.+.......+++++|.|.||.+
T Consensus 64 ~~~~nVi~vD~~~~~~~-~y~~a---~-----~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~v 125 (275)
T cd00707 64 RGDYNVIVVDWGRGANP-NYPQA---V-----NNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHV 125 (275)
T ss_pred cCCCEEEEEECcccccc-ChHHH---H-----HhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHH
Confidence 346789999998 7432 22111 1 235566678999999988765444468999999999988
No 71
>PRK10673 acyl-CoA esterase; Provisional
Probab=74.70 E-value=3.5 Score=37.06 Aligned_cols=54 Identities=19% Similarity=0.347 Sum_probs=36.4
Q ss_pred ceEEEeCCCCCCCccccccccC---CCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhh
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNI---SASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWV 337 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~---s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl 337 (338)
-.+++++|+.||+......+.. -+.....+++|++|..-+ .+|+ ++.+.|.+||
T Consensus 196 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~p~-------~~~~~l~~fl 252 (255)
T PRK10673 196 HPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHA-----EKPD-------AVLRAIRRYL 252 (255)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeec-----cCHH-------HHHHHHHHHH
Confidence 4699999999999876554432 245566789999997532 2333 4556666666
No 72
>PLN02209 serine carboxypeptidase
Probab=73.72 E-value=21 Score=36.31 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=40.2
Q ss_pred cCCcEEEEEee--eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCC-CCCCEEEEcccchhhc
Q 044064 90 FNASLVFIEIL--WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSS-DSSPFVVFGGSYGGRL 158 (338)
Q Consensus 90 ~~Alvv~lEHR--YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~-~~~pwI~~GGSY~GaL 158 (338)
-.|.+|++|-= =|=|....+ -.+-+.+++.+|+..|++.+=+.+.. .+.|+.++|-||||.-
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~-------~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~y 180 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTP-------IERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMI 180 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCC-------CCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCcee
Confidence 34667777743 444432111 12334456669999999987655543 5679999999999975
No 73
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=72.64 E-value=6.2 Score=35.60 Aligned_cols=62 Identities=21% Similarity=0.283 Sum_probs=47.2
Q ss_pred cchHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 80 TGFLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 80 ~g~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.++...||++ |..||-+--+ |=-+. -|.+|.-+|++..|++..+..+ ..++|++|-|+|.-.
T Consensus 19 ~~~a~~l~~~-G~~VvGvdsl~Yfw~~--------------rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADv 81 (192)
T PF06057_consen 19 KQIAEALAKQ-GVPVVGVDSLRYFWSE--------------RTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADV 81 (192)
T ss_pred HHHHHHHHHC-CCeEEEechHHHHhhh--------------CCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchh
Confidence 3445555555 8888888877 76442 2478999999999999998765 478999999999844
No 74
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=72.33 E-value=7.4 Score=37.54 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=28.6
Q ss_pred hhhhhhhHHHHHHHHhhhcC-CCCCCEEEEcccchhhc
Q 044064 122 SQQALADDAVLIRSLKQNLS-SDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 122 ~~QALaD~a~Fi~~~k~~~~-~~~~pwI~~GGSY~GaL 158 (338)
.++| .|+..|++.+=+.+. ..+.|+.++|-||||.-
T Consensus 28 ~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~Y 64 (319)
T PLN02213 28 ISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMI 64 (319)
T ss_pred HHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccch
Confidence 3556 999999998765554 36789999999999965
No 75
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=71.11 E-value=7.9 Score=39.21 Aligned_cols=70 Identities=21% Similarity=0.276 Sum_probs=47.1
Q ss_pred HHHhhhhcC-CcEEEEEeeeccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhh---cCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFN-ASLVFIEILWGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQN---LSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~-Alvv~lEHRYG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~---~~~~~~pwI~~GGSY~GaL 158 (338)
...+|++.+ ..+|.+..|-| |+.=+ ++..+ =.+-..+|.|...-+++++++ ++.+..++.++|.|+||.+
T Consensus 116 ~~~~~~~~~~~~vv~~~yRlg---~~g~~--~~~~~-~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~ 189 (493)
T cd00312 116 GDGLAREGDNVIVVSINYRLG---VLGFL--STGDI-ELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGAS 189 (493)
T ss_pred hHHHHhcCCCEEEEEeccccc---ccccc--cCCCC-CCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHH
Confidence 456677665 89999999933 11001 11111 123355788888888888875 4656679999999999988
No 76
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=70.97 E-value=5.5 Score=40.94 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=37.5
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHH-HHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDA-VLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a-~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--+|+++.| ||.|....+ ...+.++-.+|+. .|++. +. ..|++++|.|+||++
T Consensus 232 ~yrVia~Dl~G~G~S~~p~~--------~~ytl~~~a~~l~~~ll~~----lg--~~k~~LVGhSmGG~i 287 (481)
T PLN03087 232 TYRLFAVDLLGFGRSPKPAD--------SLYTLREHLEMIERSVLER----YK--VKSFHIVAHSLGCIL 287 (481)
T ss_pred CCEEEEECCCCCCCCcCCCC--------CcCCHHHHHHHHHHHHHHH----cC--CCCEEEEEECHHHHH
Confidence 6689999999 999854211 1245666666663 45443 22 358999999999998
No 77
>PRK11460 putative hydrolase; Provisional
Probab=70.47 E-value=4.5 Score=36.95 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=39.1
Q ss_pred ceEEEeCCCCCCCcccccccc-------CCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHH
Q 044064 272 SNIIFSNGMQDPWSRGGVLKN-------ISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEII 333 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~-------~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i 333 (338)
+.|++.+|+.||+-...-... ....+...++++++|.. +++++..+++.+.+.+
T Consensus 149 ~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i--------~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 149 TTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI--------DPRLMQFALDRLRYTV 209 (232)
T ss_pred CcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC--------CHHHHHHHHHHHHHHc
Confidence 679999999999977554321 12234556779999975 4678888888887766
No 78
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=66.81 E-value=7.7 Score=34.16 Aligned_cols=55 Identities=9% Similarity=0.059 Sum_probs=35.8
Q ss_pred ceEEEeCCCCCCCcccccccc---CCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 272 SNIIFSNGMQDPWSRGGVLKN---ISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
-.+++++|+.|++........ .-++...+.+++++|..-+ ++| +++.+.|.+||+
T Consensus 199 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~~-------~~~~~~i~~fl~ 256 (257)
T TIGR03611 199 HPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNV-----TDP-------ETFNRALLDFLK 256 (257)
T ss_pred ccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccc-----cCH-------HHHHHHHHHHhc
Confidence 469999999999976543221 1234566789999998544 223 345566667763
No 79
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=65.71 E-value=6.3 Score=36.71 Aligned_cols=60 Identities=17% Similarity=0.140 Sum_probs=43.8
Q ss_pred hhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 88 PKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 88 ~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.+.|=.+|....| .|.|-=. .+. . .++-..|.+..|+.+..+ .-.+.+|-++|+||+|..
T Consensus 54 ~~~GY~vV~~D~RG~g~S~G~------~~~---~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~ 114 (272)
T PF02129_consen 54 AERGYAVVVQDVRGTGGSEGE------FDP---M-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFT 114 (272)
T ss_dssp HHTT-EEEEEE-TTSTTS-S-------B-T---T-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHH
T ss_pred HhCCCEEEEECCcccccCCCc------ccc---C-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHH
Confidence 4559999999999 9988632 111 1 667779999999999876 444569999999999966
No 80
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=65.39 E-value=9.5 Score=36.85 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=36.2
Q ss_pred CCcEEEEEee-e--ccCccCccccCCc----cccCCCChhhhhhhHHHHHHHHhhhcCCCCCC-EEEEcccchhhc
Q 044064 91 NASLVFIEIL-W--GINAIWEDSYKSA----ETLGYLNSQQALADDAVLIRSLKQNLSSDSSP-FVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-Y--G~S~P~~~~~~s~----~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~p-wI~~GGSY~GaL 158 (338)
+--||.+.|| + |.|.|-+.. ... .+.--.|+++-.+|++.+++.+ .. .+ ++++|.|+||++
T Consensus 72 ~~~vi~~D~~G~~~g~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~--~~~~~l~G~S~Gg~i 140 (351)
T TIGR01392 72 RYFVVCSNVLGGCYGSTGPSSIN-PGGRPYGSDFPLITIRDDVKAQKLLLDHL----GI--EQIAAVVGGSMGGMQ 140 (351)
T ss_pred ceEEEEecCCCCCCCCCCCCCCC-CCCCcCCCCCCCCcHHHHHHHHHHHHHHc----CC--CCceEEEEECHHHHH
Confidence 4589999999 6 344442110 000 0111245666666666666543 32 34 999999999998
No 81
>PLN00021 chlorophyllase
Probab=64.69 E-value=9.3 Score=36.88 Aligned_cols=14 Identities=36% Similarity=0.558 Sum_probs=12.8
Q ss_pred CCEEEEcccchhhc
Q 044064 145 SPFVVFGGSYGGRL 158 (338)
Q Consensus 145 ~pwI~~GGSY~GaL 158 (338)
.+++++|.|.||.+
T Consensus 126 ~~v~l~GHS~GG~i 139 (313)
T PLN00021 126 SKLALAGHSRGGKT 139 (313)
T ss_pred hheEEEEECcchHH
Confidence 58999999999977
No 82
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=64.56 E-value=6.6 Score=33.54 Aligned_cols=50 Identities=22% Similarity=0.241 Sum_probs=33.5
Q ss_pred CcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 92 ASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 92 Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
--++++.-| +|.|.+. .. +..++ .+|+..|++.+.. .+++++|.|+||.+
T Consensus 51 ~~~~~~d~~g~g~s~~~-~~--~~~~~--------~~~~~~~~~~~~~------~~~~l~G~S~Gg~~ 101 (282)
T COG0596 51 YRVIAPDLRGHGRSDPA-GY--SLSAY--------ADDLAALLDALGL------EKVVLVGHSMGGAV 101 (282)
T ss_pred eEEEEecccCCCCCCcc-cc--cHHHH--------HHHHHHHHHHhCC------CceEEEEecccHHH
Confidence 588999999 9998710 00 12221 6777777664332 23999999999977
No 83
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=63.48 E-value=15 Score=34.70 Aligned_cols=62 Identities=27% Similarity=0.311 Sum_probs=43.8
Q ss_pred chHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhh---hcCCCCCCEEEEcccchh
Q 044064 81 GFLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQ---NLSSDSSPFVVFGGSYGG 156 (338)
Q Consensus 81 g~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~---~~~~~~~pwI~~GGSY~G 156 (338)
.+...++...|+.+|.+..| --+- ||+. ++.|+..=.+.+.. +++.+..++++.|.|-||
T Consensus 100 ~~~~~~~~~~g~~vv~vdYrlaPe~-~~p~---------------~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG 163 (312)
T COG0657 100 ALVARLAAAAGAVVVSVDYRLAPEH-PFPA---------------ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGG 163 (312)
T ss_pred HHHHHHHHHcCCEEEecCCCCCCCC-CCCc---------------hHHHHHHHHHHHHhhhHhhCCCccceEEEecCccc
Confidence 46788999999999999999 4332 5433 23443333333332 567777899999999999
Q ss_pred hc
Q 044064 157 RL 158 (338)
Q Consensus 157 aL 158 (338)
.|
T Consensus 164 ~L 165 (312)
T COG0657 164 HL 165 (312)
T ss_pred HH
Confidence 88
No 84
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=63.24 E-value=14 Score=37.51 Aligned_cols=61 Identities=16% Similarity=0.261 Sum_probs=38.5
Q ss_pred CCcEEEEEee--eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCC-CCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL--WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSS-DSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR--YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~-~~~pwI~~GGSY~GaL 158 (338)
.|.+|++|-= =|=|....+ -.+.+-+++.+|+..|++.+=+.+.. .+.|+.++|-||||.-
T Consensus 115 ~anllfiDqPvGtGfSy~~~~-------~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~y 178 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKTP-------IDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMI 178 (433)
T ss_pred cCcEEEecCCCCCCccCCCCC-------CCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcccee
Confidence 3677777743 455532211 12233333348999999887555533 5689999999999975
No 85
>PHA02857 monoglyceride lipase; Provisional
Probab=62.09 E-value=8.1 Score=35.42 Aligned_cols=58 Identities=16% Similarity=0.246 Sum_probs=39.8
Q ss_pred ceEEEeCCCCCCCcccccccc----CCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 272 SNIIFSNGMQDPWSRGGVLKN----ISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~----~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
--++++.|+.|++-....... ..+.....++++++|..= .+ ..+.|+++.+.|.+||+
T Consensus 210 ~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~-----~e----~~~~~~~~~~~~~~~l~ 271 (276)
T PHA02857 210 TPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLH-----KE----TDEVKKSVMKEIETWIF 271 (276)
T ss_pred CCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCccccc-----CC----chhHHHHHHHHHHHHHH
Confidence 469999999999976544322 223456678999999642 11 22368888888888873
No 86
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=61.73 E-value=15 Score=36.85 Aligned_cols=59 Identities=15% Similarity=0.309 Sum_probs=35.1
Q ss_pred hhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 88 PKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 88 ~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.+.|-.++.++.| +|+|....- ...... ..+ ..++.++..-..+..++.++|.|+||.+
T Consensus 219 a~~Gy~vl~~D~pG~G~s~~~~~----~~d~~~--~~~------avld~l~~~~~vd~~ri~l~G~S~GG~~ 278 (414)
T PRK05077 219 APRGIAMLTIDMPSVGFSSKWKL----TQDSSL--LHQ------AVLNALPNVPWVDHTRVAAFGFRFGANV 278 (414)
T ss_pred HhCCCEEEEECCCCCCCCCCCCc----cccHHH--HHH------HHHHHHHhCcccCcccEEEEEEChHHHH
Confidence 3558889999999 999965311 111100 011 2233333221223469999999999977
No 87
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=60.60 E-value=10 Score=33.72 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=30.0
Q ss_pred hhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 122 SQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 122 ~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.+.+-.+|+.|.+-++... .++....++|+|||...
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v 122 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTV 122 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHH
Confidence 4677789999999998765 56789999999999865
No 88
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=59.80 E-value=13 Score=28.33 Aligned_cols=37 Identities=8% Similarity=-0.020 Sum_probs=27.5
Q ss_pred cCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHH
Q 044064 90 FNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIR 134 (338)
Q Consensus 90 ~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~ 134 (338)
.|-.|+...|| .|+|..-... .+ +.++-+.|+..|++
T Consensus 42 ~G~~V~~~D~rGhG~S~g~rg~---~~-----~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 42 QGYAVFAYDHRGHGRSEGKRGH---ID-----SFDDYVDDLHQFIQ 79 (79)
T ss_pred CCCEEEEECCCcCCCCCCcccc---cC-----CHHHHHHHHHHHhC
Confidence 47889999999 9999853221 11 35788999999874
No 89
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=58.13 E-value=9.8 Score=38.22 Aligned_cols=44 Identities=25% Similarity=0.437 Sum_probs=36.7
Q ss_pred CccccCCC----ChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 113 SAETLGYL----NSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 113 s~~nL~yL----t~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
..++|||. |.||.-+|+...|++..+..+ ..+++++|-|.|.-.
T Consensus 292 GvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfGADv 339 (456)
T COG3946 292 GVDSLRYFWSERTPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFGADV 339 (456)
T ss_pred eeehhhhhhccCCHHHHHHHHHHHHHHHHHhhC--cceEEEEeecccchh
Confidence 35677775 789999999999999998765 479999999998755
No 90
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=56.97 E-value=12 Score=39.52 Aligned_cols=69 Identities=20% Similarity=0.238 Sum_probs=41.9
Q ss_pred HHHhhhhcCCcEEEEEee--eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFNASLVFIEIL--WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR--YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..+|. .|-.||.+--| =|....|.+. .-..+. +..++|+...++.+++.-.....++.++|+||||-+
T Consensus 416 ~q~~~~-~G~~V~~~n~RGS~GyG~~F~~~--~~~~~g----~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGym 486 (620)
T COG1506 416 IQVLAS-AGYAVLAPNYRGSTGYGREFADA--IRGDWG----GVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYM 486 (620)
T ss_pred hHHHhc-CCeEEEEeCCCCCCccHHHHHHh--hhhccC----CccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHH
Confidence 334444 48999999988 4444455332 112332 234566666767554332334469999999999966
No 91
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=56.73 E-value=12 Score=36.44 Aligned_cols=39 Identities=8% Similarity=-0.001 Sum_probs=29.7
Q ss_pred eEEEeCCCCCCCcccccccc---CCCCceEEEcCCCcccccC
Q 044064 273 NIIFSNGMQDPWSRGGVLKN---ISASIIALVTKKGAHHVDF 311 (338)
Q Consensus 273 nIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g~aHc~Dl 311 (338)
.|..+.|+.|||-..-.... ..++....+|+||+||.-+
T Consensus 266 pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~ 307 (326)
T KOG1454|consen 266 PVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHL 307 (326)
T ss_pred ceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCccccc
Confidence 49999999999988763222 1256678899999999654
No 92
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=56.02 E-value=21 Score=30.82 Aligned_cols=48 Identities=21% Similarity=0.270 Sum_probs=33.0
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+--++++++| +|.|.+... .+.++..+|+..+ . +.|++++|.|+||++
T Consensus 30 ~~~vi~~d~~G~G~s~~~~~----------~~~~~~~~~~~~~-------~---~~~~~lvG~S~Gg~~ 78 (245)
T TIGR01738 30 HFTLHLVDLPGHGRSRGFGP----------LSLADAAEAIAAQ-------A---PDPAIWLGWSLGGLV 78 (245)
T ss_pred CeEEEEecCCcCccCCCCCC----------cCHHHHHHHHHHh-------C---CCCeEEEEEcHHHHH
Confidence 4689999999 999865311 2344444444332 1 258999999999987
No 93
>PLN02454 triacylglycerol lipase
Probab=55.99 E-value=15 Score=36.97 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=25.1
Q ss_pred hhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 124 QALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 124 QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.+-+++-..++.+++.+...+.+++++|+|.||||
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGAL 241 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASL 241 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHH
Confidence 34455556666666666544456999999999999
No 94
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=55.27 E-value=21 Score=32.82 Aligned_cols=72 Identities=19% Similarity=0.067 Sum_probs=45.1
Q ss_pred HHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+.++|.+.|.++|+.|-- -....-.=+.+ + ....-...+ .+.++..|+++..++..+..+|.+.|-|-||++
T Consensus 38 ~~~lAd~~GfivvyP~~~~~~~~~~cw~w~-~--~~~~~g~~d-~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~m 110 (220)
T PF10503_consen 38 WNALADREGFIVVYPEQSRRANPQGCWNWF-S--DDQQRGGGD-VAFIAALVDYVAARYNIDPSRVYVTGLSNGGMM 110 (220)
T ss_pred HHHHhhcCCeEEEcccccccCCCCCccccc-c--cccccCccc-hhhHHHHHHhHhhhcccCCCceeeEEECHHHHH
Confidence 678999999999999843 21111000000 0 000011111 234666777788888888899999999999998
No 95
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=54.93 E-value=16 Score=34.35 Aligned_cols=53 Identities=17% Similarity=0.120 Sum_probs=34.8
Q ss_pred eEEEeCCCCCCCccccccccC---CCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 044064 273 NIIFSNGMQDPWSRGGVLKNI---SASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKW 336 (338)
Q Consensus 273 nIiFtNG~~DPW~~~gv~~~~---s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~W 336 (338)
-+++++|+.|++......... -+....+++++++|+. .+++.+. ++++.|.+|
T Consensus 250 P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~-------~~~~~~~----~i~~~~~~~ 305 (306)
T TIGR01249 250 PTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSA-------FDPNNLA----ALVHALETY 305 (306)
T ss_pred CeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCC-------CChHHHH----HHHHHHHHh
Confidence 589999999999876543322 2345567889999984 3555554 444444444
No 96
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=54.20 E-value=14 Score=34.43 Aligned_cols=56 Identities=11% Similarity=0.068 Sum_probs=39.1
Q ss_pred cceEEEeCCCCCCCcccccccc-----------CCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 271 GSNIIFSNGMQDPWSRGGVLKN-----------ISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 271 asnIiFtNG~~DPW~~~gv~~~-----------~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
..-+++..|..||+... .... .++.+..+.+++++|+. ....+|+++.+.|.+||+
T Consensus 207 ~~P~ll~~g~~D~~~~~-~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l-----------~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 207 QGPVLFILSGNDLTAQE-FADSVLGEPAWRGALEDPGIERVEIDGADHTF-----------SDRVWREWVAARTTEWLR 273 (274)
T ss_pred CCcEEEEEcCcchhHHH-HHHHhccChhhHHHhhcCCeEEEecCCCCccc-----------ccHHHHHHHHHHHHHHHh
Confidence 35688899999998531 1110 23566678899999963 123488899999999984
No 97
>PRK11460 putative hydrolase; Provisional
Probab=54.03 E-value=19 Score=32.74 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=27.7
Q ss_pred hhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 122 SQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 122 ~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
++++++++..+++.+..++.....+++++|.|.||++
T Consensus 80 ~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~ 116 (232)
T PRK11460 80 VAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIM 116 (232)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHH
Confidence 3455666667777776666655678999999999987
No 98
>PLN02571 triacylglycerol lipase
Probab=53.77 E-value=11 Score=38.09 Aligned_cols=32 Identities=25% Similarity=0.415 Sum_probs=24.3
Q ss_pred hhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 123 QQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 123 ~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+|.++++..+++..+ ..+.+++++|+|.||||
T Consensus 208 ~qvl~eV~~L~~~y~----~e~~sI~VTGHSLGGAL 239 (413)
T PLN02571 208 DQVLNEVGRLVEKYK----DEEISITICGHSLGAAL 239 (413)
T ss_pred HHHHHHHHHHHHhcC----cccccEEEeccchHHHH
Confidence 778888777765433 23458999999999999
No 99
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=53.74 E-value=31 Score=30.35 Aligned_cols=61 Identities=11% Similarity=0.213 Sum_probs=39.9
Q ss_pred cceEEEeCCCCCCCccccccc-------cCCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 271 GSNIIFSNGMQDPWSRGGVLK-------NISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 271 asnIiFtNG~~DPW~~~gv~~-------~~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
..-|++++|+.|+=-...-.. ........+++|+++|... .++.-++.++++.+.++++|+
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~-------~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG-------NPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT-------SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC-------CchhHHHHHHHHHHHHHHHcC
Confidence 467999999999843322211 1123466788899999322 344555788888888888874
No 100
>PRK10115 protease 2; Provisional
Probab=53.69 E-value=9.1 Score=41.06 Aligned_cols=72 Identities=19% Similarity=0.212 Sum_probs=46.6
Q ss_pred HHhhhhcCCcEEEEEee----eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhcc
Q 044064 84 LDIAPKFNASLVFIEIL----WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRLM 159 (338)
Q Consensus 84 ~~lA~~~~Alvv~lEHR----YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL~ 159 (338)
..|+.+ |..++..=-| ||+..- + .-+.+.=.+...|+..-++++..+--....++.+.||||||-|.
T Consensus 468 ~~l~~r-G~~v~~~n~RGs~g~G~~w~--~------~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~ 538 (686)
T PRK10115 468 LSLLDR-GFVYAIVHVRGGGELGQQWY--E------DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLM 538 (686)
T ss_pred HHHHHC-CcEEEEEEcCCCCccCHHHH--H------hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHH
Confidence 345554 7777777767 443222 1 11223334778999999888876533345799999999999986
Q ss_pred ccccc
Q 044064 160 CKIID 164 (338)
Q Consensus 160 C~~i~ 164 (338)
...+.
T Consensus 539 ~~~~~ 543 (686)
T PRK10115 539 GVAIN 543 (686)
T ss_pred HHHHh
Confidence 55554
No 101
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=53.15 E-value=28 Score=36.36 Aligned_cols=65 Identities=8% Similarity=0.029 Sum_probs=43.2
Q ss_pred cchHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 80 TGFLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 80 ~g~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
++++..++++ |--|+.+..| .|.|..- . +.+ +-+..++...++.+++... ..|++++|.|.||.+
T Consensus 210 ~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~--~--~~d-------dY~~~~i~~al~~v~~~~g--~~kv~lvG~cmGGtl 275 (532)
T TIGR01838 210 NSLVRWLVEQ-GHTVFVISWRNPDASQAD--K--TFD-------DYIRDGVIAALEVVEAITG--EKQVNCVGYCIGGTL 275 (532)
T ss_pred hHHHHHHHHC-CcEEEEEECCCCCccccc--C--Chh-------hhHHHHHHHHHHHHHHhcC--CCCeEEEEECcCcHH
Confidence 3555566654 7789999999 9987431 1 111 3344556666666665443 368999999999987
No 102
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=50.98 E-value=20 Score=34.97 Aligned_cols=62 Identities=11% Similarity=0.234 Sum_probs=47.3
Q ss_pred HHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..+|.. |=-+|++--| ||.|-+-.. ----|+..-.+|+..++.++- ..+++++|++||+++
T Consensus 64 ~~~la~~-~~rviA~DlrGyG~Sd~P~~-------~~~Yt~~~l~~di~~lld~Lg------~~k~~lvgHDwGaiv 126 (322)
T KOG4178|consen 64 IPGLASR-GYRVIAPDLRGYGFSDAPPH-------ISEYTIDELVGDIVALLDHLG------LKKAFLVGHDWGAIV 126 (322)
T ss_pred hhhhhhc-ceEEEecCCCCCCCCCCCCC-------cceeeHHHHHHHHHHHHHHhc------cceeEEEeccchhHH
Confidence 4556665 3779999999 998876422 222456666799999999776 479999999999999
No 103
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=50.48 E-value=16 Score=37.15 Aligned_cols=35 Identities=11% Similarity=0.156 Sum_probs=29.2
Q ss_pred hhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 122 SQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 122 ~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.++.++|++.+++.+.+..+ ..|++++|+|.||.+
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlv 175 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLL 175 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHH
Confidence 46778999999998877654 369999999999988
No 104
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=48.83 E-value=19 Score=30.99 Aligned_cols=54 Identities=11% Similarity=0.309 Sum_probs=33.0
Q ss_pred ceEEEeCCCCCCCccccccc---cCCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 272 SNIIFSNGMQDPWSRGGVLK---NISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~---~~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
..+++++|+.|+--. .... ...+....+++|+++|+.=+. +| +++.+.|.+||+
T Consensus 195 ~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e-----~~-------~~~~~~i~~~l~ 251 (251)
T TIGR03695 195 IPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLE-----NP-------EAFAKILLAFLE 251 (251)
T ss_pred CceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCcc-----Ch-------HHHHHHHHHHhC
Confidence 569999999997422 1111 122445677899999985442 23 345556667663
No 105
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=48.32 E-value=21 Score=34.38 Aligned_cols=59 Identities=19% Similarity=0.241 Sum_probs=38.2
Q ss_pred cceEEEeCCCCCCCcccccccc----C-CCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhh
Q 044064 271 GSNIIFSNGMQDPWSRGGVLKN----I-SASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWV 337 (338)
Q Consensus 271 asnIiFtNG~~DPW~~~gv~~~----~-s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl 337 (338)
.--+++++|+.|+......... . ++....+++||++|+. ...+|++ .++++.+.|.+||
T Consensus 279 ~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l-----~~e~p~~---~~~~v~~~i~~wL 342 (349)
T PLN02385 279 SLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSI-----LEGEPDE---MIFQVLDDIISWL 342 (349)
T ss_pred CCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeec-----ccCCChh---hHHHHHHHHHHHH
Confidence 3569999999999877554332 2 2345677899999973 1223432 2455667777776
No 106
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=47.85 E-value=41 Score=31.72 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=50.1
Q ss_pred hHHHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchh
Q 044064 82 FLLDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGG 156 (338)
Q Consensus 82 ~~~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~G 156 (338)
+...++..+|-.++..--| ||.|.=.+. .. .-.||+..--+.+++.++ ++.++|++|-|-|-
T Consensus 79 ~~~~l~~~ln~nv~~~DYSGyG~S~G~ps----E~--------n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt 141 (258)
T KOG1552|consen 79 LFKELSIFLNCNVVSYDYSGYGRSSGKPS----ER--------NLYADIKAVYEWLRNRYG-SPERIILYGQSIGT 141 (258)
T ss_pred HHHHHhhcccceEEEEecccccccCCCcc----cc--------cchhhHHHHHHHHHhhcC-CCceEEEEEecCCc
Confidence 4556777889999999999 999875422 11 346899999999999998 78999999999774
No 107
>PLN03037 lipase class 3 family protein; Provisional
Probab=47.71 E-value=16 Score=37.83 Aligned_cols=34 Identities=24% Similarity=0.445 Sum_probs=26.6
Q ss_pred hhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 123 QQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 123 ~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+|.++++...++..+.. .++.++++.|+|.||||
T Consensus 298 eQVl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGAL 331 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDR--GEEVSLTITGHSLGGAL 331 (525)
T ss_pred HHHHHHHHHHHHhcccc--CCcceEEEeccCHHHHH
Confidence 78888888887666531 23568999999999999
No 108
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=47.36 E-value=25 Score=30.43 Aligned_cols=38 Identities=13% Similarity=0.072 Sum_probs=26.7
Q ss_pred ceEEEeCCCCCCCccccccccC---CCCceEEEcCCCcccc
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNI---SASIIALVTKKGAHHV 309 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~---s~~~~~i~i~g~aHc~ 309 (338)
--|++++|+.|+.-........ -+....+++++++|+.
T Consensus 194 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 234 (251)
T TIGR02427 194 VPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIP 234 (251)
T ss_pred CCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcc
Confidence 4699999999999765432211 2344567889999975
No 109
>PLN02761 lipase class 3 family protein
Probab=47.18 E-value=17 Score=37.62 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=21.8
Q ss_pred hhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 123 QQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 123 ~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+|.++.+..+++........++..++++|+|.||||
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGAL 307 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASL 307 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHH
Confidence 455555444433222111234568999999999999
No 110
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=46.77 E-value=26 Score=34.48 Aligned_cols=71 Identities=14% Similarity=0.298 Sum_probs=54.1
Q ss_pred HHHhhhhcCCcEEEEEee-eccCccCccc---cCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFNASLVFIEIL-WGINAIWEDS---YKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR-YG~S~P~~~~---~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
...|+++ |-.-+.||.= ||.-+|-+.. +.+...| ++=..|.+.+.+....+++.+ + -.|+.+.|-|.||-+
T Consensus 114 a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl-~~~g~~~i~E~~~Ll~Wl~~~-G--~~~~g~~G~SmGG~~ 188 (348)
T PF09752_consen 114 ARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDL-FVMGRATILESRALLHWLERE-G--YGPLGLTGISMGGHM 188 (348)
T ss_pred hhHHHHc-CcceEEEecccccccChhHhhcccccchhHH-HHHHhHHHHHHHHHHHHHHhc-C--CCceEEEEechhHhh
Confidence 5678888 9999999999 9999997443 1122222 222377888999999999877 4 359999999999987
No 111
>PLN02408 phospholipase A1
Probab=45.80 E-value=20 Score=35.55 Aligned_cols=32 Identities=19% Similarity=0.316 Sum_probs=21.7
Q ss_pred hhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 123 QQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 123 ~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+|.++.+..+++ .+.....++++.|+|.||||
T Consensus 182 ~qVl~eI~~ll~----~y~~~~~sI~vTGHSLGGAL 213 (365)
T PLN02408 182 EMVREEIARLLQ----SYGDEPLSLTITGHSLGAAL 213 (365)
T ss_pred HHHHHHHHHHHH----hcCCCCceEEEeccchHHHH
Confidence 455666555543 34333457999999999999
No 112
>PLN02753 triacylglycerol lipase
Probab=44.99 E-value=19 Score=37.40 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=23.3
Q ss_pred hhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 123 QQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 123 ~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+|.++.+..+++..+.+ ..++.++++.|+|.||||
T Consensus 291 eQVl~eVkrLl~~Y~~e-~~~~~sItVTGHSLGGAL 325 (531)
T PLN02753 291 EQILTEVKRLVEEHGDD-DDSDLSITVTGHSLGGAL 325 (531)
T ss_pred HHHHHHHHHHHHHcccc-cCCCceEEEEccCHHHHH
Confidence 56666655555433321 123578999999999999
No 113
>PLN02310 triacylglycerol lipase
Probab=43.46 E-value=22 Score=35.80 Aligned_cols=35 Identities=26% Similarity=0.411 Sum_probs=24.0
Q ss_pred hhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 122 SQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 122 ~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.+|.++.+..+++..+. ..++.++++.|+|.||||
T Consensus 188 ~~qVl~eV~~L~~~y~~--~~e~~sI~vTGHSLGGAL 222 (405)
T PLN02310 188 SEQVMQEVKRLVNFYRG--KGEEVSLTVTGHSLGGAL 222 (405)
T ss_pred HHHHHHHHHHHHHhhcc--cCCcceEEEEcccHHHHH
Confidence 36777666555544332 124568999999999999
No 114
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=43.34 E-value=42 Score=34.42 Aligned_cols=62 Identities=13% Similarity=0.161 Sum_probs=40.1
Q ss_pred hhhccceEEEeCCCCCCCcccccccc---------------CCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHH
Q 044064 267 LKRFGSNIIFSNGMQDPWSRGGVLKN---------------ISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVE 331 (338)
Q Consensus 267 l~~~asnIiFtNG~~DPW~~~gv~~~---------------~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~ 331 (338)
+++.+-++|..+|..||=-...-+.. ..+....+++||.+||.---.+.+. ..+.
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~----------d~l~ 418 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPF----------DALT 418 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCC----------CHHH
Confidence 44457899999999999744332111 1234567899999999854333333 4566
Q ss_pred HHHHhhC
Q 044064 332 IIQKWVG 338 (338)
Q Consensus 332 ~i~~Wl~ 338 (338)
.|.+|++
T Consensus 419 aL~~WVE 425 (474)
T PF07519_consen 419 ALVDWVE 425 (474)
T ss_pred HHHHHHh
Confidence 6777764
No 115
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=43.12 E-value=36 Score=33.09 Aligned_cols=38 Identities=21% Similarity=0.164 Sum_probs=26.1
Q ss_pred ceEEEeCCCCCCCccccc--------cccCCCCceEEEcCCCcccc
Q 044064 272 SNIIFSNGMQDPWSRGGV--------LKNISASIIALVTKKGAHHV 309 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv--------~~~~s~~~~~i~i~g~aHc~ 309 (338)
--+.++.|+.||...... ....-++...++|+|++|+.
T Consensus 293 ~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~ 338 (360)
T PLN02679 293 LPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCP 338 (360)
T ss_pred CCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCc
Confidence 468999999999876542 11112345567899999963
No 116
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=42.73 E-value=26 Score=32.20 Aligned_cols=29 Identities=21% Similarity=0.382 Sum_probs=22.0
Q ss_pred hhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 127 ADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 127 aD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
...+.+.+.+.+.+. .++++.|+|-||+|
T Consensus 69 ~~A~~yl~~~~~~~~---~~i~v~GHSkGGnL 97 (224)
T PF11187_consen 69 KSALAYLKKIAKKYP---GKIYVTGHSKGGNL 97 (224)
T ss_pred HHHHHHHHHHHHhCC---CCEEEEEechhhHH
Confidence 345666677766654 36999999999999
No 117
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=42.46 E-value=62 Score=30.05 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=27.5
Q ss_pred ceEEEeCCCCCCCcccc-cc-------ccCCCCceEEEcCCCcccccCC
Q 044064 272 SNIIFSNGMQDPWSRGG-VL-------KNISASIIALVTKKGAHHVDFR 312 (338)
Q Consensus 272 snIiFtNG~~DPW~~~g-v~-------~~~s~~~~~i~i~g~aHc~Dl~ 312 (338)
..+++.+|+.||..... -. +.....+..++.||..|-++..
T Consensus 212 ~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~ 260 (275)
T TIGR02821 212 STILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFI 260 (275)
T ss_pred CCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhH
Confidence 56888899999987752 11 1122334556789999988754
No 118
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=42.17 E-value=83 Score=29.45 Aligned_cols=74 Identities=15% Similarity=0.173 Sum_probs=54.3
Q ss_pred hHHHhhhhc--CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 82 FLLDIAPKF--NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 82 ~~~~lA~~~--~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
|+..|-+.+ +..|+.+=|. +-.+...+.. + ++-+..+.++=++=-..|++.+..+...++.|+|++|+|=|.-+
T Consensus 21 Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~--~-~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi 97 (266)
T PF10230_consen 21 FLSALYEKLNPQFEILGISHAGHSTSPSNSKF--S-PNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYI 97 (266)
T ss_pred HHHHHHHhCCCCCeeEEecCCCCcCCcccccc--c-CCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHH
Confidence 666777664 6777788888 7655544222 2 45788889888888888888877665446789999999999976
No 119
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=41.94 E-value=40 Score=30.61 Aligned_cols=38 Identities=11% Similarity=0.003 Sum_probs=27.3
Q ss_pred ceEEEeCCCCCCCcccccccc---CCCCceEEEcCCCcccc
Q 044064 272 SNIIFSNGMQDPWSRGGVLKN---ISASIIALVTKKGAHHV 309 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g~aHc~ 309 (338)
--+.++.|+.||.-....... ..+....++|++++|+.
T Consensus 224 ~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~ 264 (282)
T TIGR03343 224 AKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWA 264 (282)
T ss_pred CCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCC
Confidence 458999999999876544322 23456668899999984
No 120
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=41.79 E-value=25 Score=28.68 Aligned_cols=15 Identities=40% Similarity=0.629 Sum_probs=13.7
Q ss_pred CCCEEEEcccchhhc
Q 044064 144 SSPFVVFGGSYGGRL 158 (338)
Q Consensus 144 ~~pwI~~GGSY~GaL 158 (338)
+..+++.|+|-||++
T Consensus 63 ~~~i~itGHSLGGal 77 (140)
T PF01764_consen 63 DYSIVITGHSLGGAL 77 (140)
T ss_dssp TSEEEEEEETHHHHH
T ss_pred CccchhhccchHHHH
Confidence 478999999999998
No 121
>PLN02324 triacylglycerol lipase
Probab=41.38 E-value=26 Score=35.35 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=22.7
Q ss_pred hhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 123 QQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 123 ~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+|.++.+..+++ .+..++..+++.|+|.||||
T Consensus 197 eqVl~eV~~L~~----~Yp~e~~sItvTGHSLGGAL 228 (415)
T PLN02324 197 EQVQGELKRLLE----LYKNEEISITFTGHSLGAVM 228 (415)
T ss_pred HHHHHHHHHHHH----HCCCCCceEEEecCcHHHHH
Confidence 566666655544 34434467999999999999
No 122
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=39.59 E-value=34 Score=31.32 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=20.1
Q ss_pred HHHHHHHHhhhc---CCCCCCEEEEcccchhhc
Q 044064 129 DAVLIRSLKQNL---SSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 129 ~a~Fi~~~k~~~---~~~~~pwI~~GGSY~GaL 158 (338)
+++.++.+...+ ..+..|+|++|+|.||-+
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlv 98 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLV 98 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHH
Confidence 444445554444 234579999999999965
No 123
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=39.40 E-value=35 Score=31.59 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=27.0
Q ss_pred ceEEEeCCCCCCCccccccccC---CCCceEEEcCCCcccc
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNI---SASIIALVTKKGAHHV 309 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~---s~~~~~i~i~g~aHc~ 309 (338)
--+.+++|+.|++......... .+....+++++++|..
T Consensus 235 ~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 275 (294)
T PLN02824 235 CPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCP 275 (294)
T ss_pred CCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCCh
Confidence 4699999999999876543322 2334567899999963
No 124
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=39.36 E-value=33 Score=30.87 Aligned_cols=29 Identities=24% Similarity=0.293 Sum_probs=19.7
Q ss_pred hHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 128 DDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 128 D~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
++...++..++++ ++.++++.|+|-||++
T Consensus 113 ~~~~~~~~~~~~~--p~~~i~vtGHSLGGai 141 (229)
T cd00519 113 QVLPELKSALKQY--PDYKIIVTGHSLGGAL 141 (229)
T ss_pred HHHHHHHHHHhhC--CCceEEEEccCHHHHH
Confidence 3334444444333 4679999999999988
No 125
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=38.70 E-value=24 Score=29.63 Aligned_cols=16 Identities=38% Similarity=0.449 Sum_probs=14.5
Q ss_pred CCCCEEEEcccchhhc
Q 044064 143 DSSPFVVFGGSYGGRL 158 (338)
Q Consensus 143 ~~~pwI~~GGSY~GaL 158 (338)
++.+++++|.|.||++
T Consensus 26 p~~~i~v~GHSlGg~l 41 (153)
T cd00741 26 PDYKIHVTGHSLGGAL 41 (153)
T ss_pred CCCeEEEEEcCHHHHH
Confidence 4679999999999988
No 126
>PLN02802 triacylglycerol lipase
Probab=38.50 E-value=29 Score=35.84 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=21.2
Q ss_pred hhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 123 QQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 123 ~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+|.++++..+++ .|..++..+++.|+|.||||
T Consensus 312 eqVl~eV~~Ll~----~Y~~e~~sI~VTGHSLGGAL 343 (509)
T PLN02802 312 ESVVGEVRRLME----KYKGEELSITVTGHSLGAAL 343 (509)
T ss_pred HHHHHHHHHHHH----hCCCCcceEEEeccchHHHH
Confidence 445555444433 34434468999999999999
No 127
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=38.29 E-value=40 Score=29.90 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=24.7
Q ss_pred ceEEEeCCCCCCCccccccc--cCCCCceEEEcCCCccccc
Q 044064 272 SNIIFSNGMQDPWSRGGVLK--NISASIIALVTKKGAHHVD 310 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~--~~s~~~~~i~i~g~aHc~D 310 (338)
-.++++.|+.|+........ ..-+....+++++++|+.=
T Consensus 232 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 272 (288)
T TIGR01250 232 VPTLLTVGEFDTMTPEAAREMQELIAGSRLVVFPDGSHMTM 272 (288)
T ss_pred CCEEEEecCCCccCHHHHHHHHHhccCCeEEEeCCCCCCcc
Confidence 46899999999863322111 1123445678999999743
No 128
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=37.70 E-value=35 Score=32.35 Aligned_cols=58 Identities=19% Similarity=0.181 Sum_probs=36.1
Q ss_pred ceEEEeCCCCCCCccccccccC-----CCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhh
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNI-----SASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWV 337 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~-----s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl 337 (338)
.-++++.|+.|++-........ .+....++++|++|..=+- .|+. .++++.+.|.+||
T Consensus 252 ~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e-----~pd~---~~~~~~~~i~~fl 314 (330)
T PLN02298 252 IPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFG-----EPDE---NIEIVRRDILSWL 314 (330)
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecC-----CCHH---HHHHHHHHHHHHH
Confidence 4699999999999876654321 2345667889999964322 2322 3344555555555
No 129
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=37.53 E-value=29 Score=34.39 Aligned_cols=32 Identities=31% Similarity=0.328 Sum_probs=22.8
Q ss_pred hhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 126 LADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 126 LaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+.|.++..+.+-..++-+ .=-.++|||+|||.
T Consensus 129 i~D~V~aq~~ll~~LGI~-~l~avvGgSmGGMq 160 (368)
T COG2021 129 IRDMVRAQRLLLDALGIK-KLAAVVGGSMGGMQ 160 (368)
T ss_pred HHHHHHHHHHHHHhcCcc-eEeeeeccChHHHH
Confidence 578888877666666532 12348999999998
No 130
>PLN02511 hydrolase
Probab=37.12 E-value=1.1e+02 Score=30.07 Aligned_cols=43 Identities=14% Similarity=0.187 Sum_probs=30.4
Q ss_pred cceEEEeCCCCCCCccccccc----cCCCCceEEEcCCCcccccCCC
Q 044064 271 GSNIIFSNGMQDPWSRGGVLK----NISASIIALVTKKGAHHVDFRS 313 (338)
Q Consensus 271 asnIiFtNG~~DPW~~~gv~~----~~s~~~~~i~i~g~aHc~Dl~~ 313 (338)
.--+++++|+.||+....... ...+....+++++|+|+.=+-.
T Consensus 298 ~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~ 344 (388)
T PLN02511 298 RVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAG 344 (388)
T ss_pred CCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccC
Confidence 346899999999997754321 1245666788999999865543
No 131
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=36.96 E-value=20 Score=35.54 Aligned_cols=24 Identities=17% Similarity=0.061 Sum_probs=16.1
Q ss_pred ccchHHHhhhhcCCcEEEEEeeecc
Q 044064 79 NTGFLLDIAPKFNASLVFIEILWGI 103 (338)
Q Consensus 79 ~~g~~~~lA~~~~Alvv~lEHRYG~ 103 (338)
.+.+..+||.. |..|+++|||+|.
T Consensus 116 yS~~~~eLAS~-GyVV~aieHrDgS 139 (379)
T PF03403_consen 116 YSAICGELASH-GYVVAAIEHRDGS 139 (379)
T ss_dssp THHHHHHHHHT-T-EEEEE---SS-
T ss_pred HHHHHHHHHhC-CeEEEEeccCCCc
Confidence 35578899988 9999999999883
No 132
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=36.43 E-value=40 Score=30.23 Aligned_cols=55 Identities=16% Similarity=0.068 Sum_probs=35.0
Q ss_pred ceEEEeCCCCCCCcccccccc---CCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 272 SNIIFSNGMQDPWSRGGVLKN---ISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
.-+++++|+.|+--....... ..+....+++++++|..-+- +| +++.+.|.+||+
T Consensus 221 ~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-----~p-------~~~~~~i~~f~~ 278 (278)
T TIGR03056 221 IPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEE-----QA-------DGVVGLILQAAE 278 (278)
T ss_pred CCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCccccc-----CH-------HHHHHHHHHHhC
Confidence 469999999997654332221 12345568899999975432 33 346667777764
No 133
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=36.07 E-value=93 Score=30.60 Aligned_cols=64 Identities=20% Similarity=0.157 Sum_probs=45.6
Q ss_pred hhhcCCcEEEEEee-eccCccC-ccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchh-hccccc
Q 044064 87 APKFNASLVFIEIL-WGINAIW-EDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGG-RLMCKI 162 (338)
Q Consensus 87 A~~~~Alvv~lEHR-YG~S~P~-~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~G-aL~C~~ 162 (338)
+.+-|=.+|++--| =|.+.-. +-+|-+ ..| +|+++|...+++.+. ..|...+|.|-|| ||.|..
T Consensus 100 ~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~-----G~t-----~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~yl 166 (345)
T COG0429 100 LSRRGWLVVVFHFRGCSGEANTSPRLYHS-----GET-----EDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYL 166 (345)
T ss_pred HHhcCCeEEEEecccccCCcccCcceecc-----cch-----hHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHH
Confidence 45557888889999 8866542 222211 223 999999999998654 5899999999999 665543
No 134
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=36.03 E-value=71 Score=32.68 Aligned_cols=64 Identities=16% Similarity=0.277 Sum_probs=43.0
Q ss_pred hcCCcEEEEEee--eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcC-CCCCCEEEEcccchhhc
Q 044064 89 KFNASLVFIEIL--WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLS-SDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 89 ~~~Alvv~lEHR--YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~-~~~~pwI~~GGSY~GaL 158 (338)
.-.|.||+||-= =|=|.-.. ...++ .+-+..-.|.-.|.+..=+++. ..+.++.+.|-||||.-
T Consensus 115 nk~aNiLfLd~PvGvGFSYs~~-----~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~Y 181 (454)
T KOG1282|consen 115 NKEANILFLDQPVGVGFSYSNT-----SSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHY 181 (454)
T ss_pred cccccEEEEecCCcCCccccCC-----CCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccccccee
Confidence 345789999876 55444221 11222 4567778899999887655553 35679999999999954
No 135
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=35.59 E-value=41 Score=29.94 Aligned_cols=52 Identities=21% Similarity=0.198 Sum_probs=30.1
Q ss_pred ceEEEeCCCCCCCcccccccc-------CCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHH
Q 044064 272 SNIIFSNGMQDPWSRGGVLKN-------ISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVE 331 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~-------~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~ 331 (338)
+.|+.++|..||.-...-... ....+....++|++|- .++++++.+++.+.+
T Consensus 156 ~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~--------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 156 TPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE--------ISPEELRDLREFLEK 214 (216)
T ss_dssp S-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC--------CCHHHHHHHHHHHhh
Confidence 679999999999876543221 2334566788999994 345556555544433
No 136
>PLN02578 hydrolase
Probab=35.51 E-value=47 Score=32.12 Aligned_cols=53 Identities=13% Similarity=0.310 Sum_probs=31.7
Q ss_pred ceEEEeCCCCCCCcccccccc---CCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhh
Q 044064 272 SNIIFSNGMQDPWSRGGVLKN---ISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWV 337 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl 337 (338)
--+.+++|+.|||-....... .-++...+++ +++||. ..+.|++ ..+.|.+||
T Consensus 297 ~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~-----~~e~p~~-------~~~~I~~fl 352 (354)
T PLN02578 297 CPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCP-----HDEVPEQ-------VNKALLEWL 352 (354)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCc-----cccCHHH-------HHHHHHHHH
Confidence 459999999999965443221 1233445566 589983 3445554 344555665
No 137
>PRK13604 luxD acyl transferase; Provisional
Probab=35.26 E-value=84 Score=30.45 Aligned_cols=58 Identities=9% Similarity=0.041 Sum_probs=41.9
Q ss_pred hcCCcEEEEEee--eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 89 KFNASLVFIEIL--WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 89 ~~~Alvv~lEHR--YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+.|-.++..-+| .|+|-- +. +..|+.-...|+..-++++|+.. ..+++++|.|.||+.
T Consensus 62 ~~G~~vLrfD~rg~~GeS~G--~~-------~~~t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgav 121 (307)
T PRK13604 62 SNGFHVIRYDSLHHVGLSSG--TI-------DEFTMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARI 121 (307)
T ss_pred HCCCEEEEecCCCCCCCCCC--cc-------ccCcccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHH
Confidence 558999999997 599832 11 11222224799999999998752 257999999999988
No 138
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=34.07 E-value=29 Score=29.30 Aligned_cols=44 Identities=16% Similarity=0.172 Sum_probs=30.7
Q ss_pred hhhccceEEEeCCCCCCCcccccccc---CCCCceEEEcCCCccccc
Q 044064 267 LKRFGSNIIFSNGMQDPWSRGGVLKN---ISASIIALVTKKGAHHVD 310 (338)
Q Consensus 267 l~~~asnIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g~aHc~D 310 (338)
+++-...|.++.|+.|++......+. ..+....++++|++|+.=
T Consensus 172 ~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 218 (228)
T PF12697_consen 172 LPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLF 218 (228)
T ss_dssp HHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHH
T ss_pred ccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccH
Confidence 33334679999999999976333222 234667789999999843
No 139
>PRK10985 putative hydrolase; Provisional
Probab=33.08 E-value=49 Score=31.56 Aligned_cols=58 Identities=12% Similarity=0.173 Sum_probs=36.3
Q ss_pred hhhcCCchhhHhhhccceEEEeCCCCCCCcccccccc---CCCCceEEEcCCCcccccCCC
Q 044064 256 TEFGGKRIELVLKRFGSNIIFSNGMQDPWSRGGVLKN---ISASIIALVTKKGAHHVDFRS 313 (338)
Q Consensus 256 ~~yGG~~~~~~l~~~asnIiFtNG~~DPW~~~gv~~~---~s~~~~~i~i~g~aHc~Dl~~ 313 (338)
.+|...+....+++-.-.+++++|+.||......... ..+....+++++|+|+.=+..
T Consensus 240 ~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 240 DYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred HHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCC
Confidence 3444344333344434579999999999865433221 234455678999999876654
No 140
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=33.06 E-value=45 Score=33.11 Aligned_cols=39 Identities=21% Similarity=0.340 Sum_probs=26.3
Q ss_pred ceEEEeCCCCCCCccccccccC--CCCceEEEcCCCccccc
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNI--SASIIALVTKKGAHHVD 310 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~--s~~~~~i~i~g~aHc~D 310 (338)
.-+.++.|+.|+|......+.. ......++|++++|+.=
T Consensus 326 vPvLiI~G~~D~~v~~~~~~~~a~~~~a~l~vIp~aGH~~~ 366 (383)
T PLN03084 326 TPITVCWGLRDRWLNYDGVEDFCKSSQHKLIELPMAGHHVQ 366 (383)
T ss_pred CCEEEEeeCCCCCcCHHHHHHHHHhcCCeEEEECCCCCCcc
Confidence 3578999999999765432221 12345678999999743
No 141
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=32.93 E-value=88 Score=27.89 Aligned_cols=64 Identities=13% Similarity=0.244 Sum_probs=41.9
Q ss_pred ceEEEeCCCCCCCccccccc--cCCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhh
Q 044064 272 SNIIFSNGMQDPWSRGGVLK--NISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWV 337 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~--~~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl 337 (338)
+-.+|+.|..||.-..--.. ..|+.+..+.+.++-| ||.+..-..--+..+.=+...+.|..|+
T Consensus 143 tPtli~qGtrD~fGtr~~Va~y~ls~~iev~wl~~adH--DLkp~k~vsgls~~~hL~~~A~~va~~~ 208 (213)
T COG3571 143 TPTLITQGTRDEFGTRDEVAGYALSDPIEVVWLEDADH--DLKPRKLVSGLSTADHLKTLAEQVAGWA 208 (213)
T ss_pred CCeEEeecccccccCHHHHHhhhcCCceEEEEeccCcc--ccccccccccccHHHHHHHHHHHHHHHH
Confidence 55889999999996543322 2477788899999998 6665443322233444445566677775
No 142
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=32.82 E-value=63 Score=30.78 Aligned_cols=39 Identities=13% Similarity=0.115 Sum_probs=26.3
Q ss_pred ceEEEeCCCCCCCccccccccCCCCceEEEcCCCccccc
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNISASIIALVTKKGAHHVD 310 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~s~~~~~i~i~g~aHc~D 310 (338)
-.+++++|+.|+=-.....+.........++++++|..-
T Consensus 315 ~Pvlii~g~~D~~vp~~~~~~l~~~~~~~~~~~~gH~~~ 353 (371)
T PRK14875 315 IPVLVIWGEQDRIIPAAHAQGLPDGVAVHVLPGAGHMPQ 353 (371)
T ss_pred CCEEEEEECCCCccCHHHHhhccCCCeEEEeCCCCCChh
Confidence 469999999997433222233334566778999999753
No 143
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.63 E-value=44 Score=31.46 Aligned_cols=32 Identities=28% Similarity=0.489 Sum_probs=22.1
Q ss_pred hhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 122 SQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 122 ~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.++..+.++.=|+.++ +..|+++.|-|+||++
T Consensus 47 l~~~a~~yv~~Ir~~Q-----P~GPy~L~G~S~GG~v 78 (257)
T COG3319 47 LDDMAAAYVAAIRRVQ-----PEGPYVLLGWSLGGAV 78 (257)
T ss_pred HHHHHHHHHHHHHHhC-----CCCCEEEEeeccccHH
Confidence 4555555555444333 3579999999999988
No 144
>PRK10566 esterase; Provisional
Probab=31.11 E-value=77 Score=28.32 Aligned_cols=54 Identities=13% Similarity=0.222 Sum_probs=35.8
Q ss_pred ceEEEeCCCCCCCccccccccC-----CC----CceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhh
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNI-----SA----SIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWV 337 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~-----s~----~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl 337 (338)
..+++++|+.|+.-...-.... .. ....++++|++|... + .+++.++++|++||
T Consensus 187 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~--------~----~~~~~~~~fl~~~~ 249 (249)
T PRK10566 187 RPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT--------P----EALDAGVAFFRQHL 249 (249)
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--------H----HHHHHHHHHHHhhC
Confidence 4599999999999875443221 11 234567899999742 2 25677777777775
No 145
>PLN02719 triacylglycerol lipase
Probab=31.08 E-value=42 Score=34.82 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.2
Q ss_pred CCCCEEEEcccchhhc
Q 044064 143 DSSPFVVFGGSYGGRL 158 (338)
Q Consensus 143 ~~~pwI~~GGSY~GaL 158 (338)
++..+++.|+|.||||
T Consensus 296 e~~sItVTGHSLGGAL 311 (518)
T PLN02719 296 EELSITVTGHSLGGAL 311 (518)
T ss_pred CcceEEEecCcHHHHH
Confidence 3468999999999999
No 146
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=30.36 E-value=49 Score=32.87 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=25.2
Q ss_pred hhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 122 SQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 122 ~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.++....+...|+.+.+.. +.||+++|+|+||.+
T Consensus 99 ~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~ 132 (389)
T PF02450_consen 99 RDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLV 132 (389)
T ss_pred HHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchH
Confidence 4456666666766665432 589999999999988
No 147
>PRK00870 haloalkane dehalogenase; Provisional
Probab=30.07 E-value=50 Score=30.77 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=24.8
Q ss_pred ceEEEeCCCCCCCccccccccCC---CCc---eEEEcCCCcccc
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNIS---ASI---IALVTKKGAHHV 309 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~s---~~~---~~i~i~g~aHc~ 309 (338)
.-++++.|+.||...... .... +.. ...++++++|..
T Consensus 240 ~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~ 282 (302)
T PRK00870 240 KPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFL 282 (302)
T ss_pred CceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccc
Confidence 459999999999876433 2211 111 256899999974
No 148
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=29.09 E-value=34 Score=30.37 Aligned_cols=37 Identities=27% Similarity=0.381 Sum_probs=31.0
Q ss_pred hhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 122 SQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 122 ~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.+++.+|+...+..++..-.....++.++|-|+||.+
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~ 111 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKL 111 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHH
Confidence 5788999999999998764344569999999999988
No 149
>PLN00413 triacylglycerol lipase
Probab=28.74 E-value=37 Score=34.91 Aligned_cols=16 Identities=44% Similarity=0.740 Sum_probs=14.6
Q ss_pred CCCCEEEEcccchhhc
Q 044064 143 DSSPFVVFGGSYGGRL 158 (338)
Q Consensus 143 ~~~pwI~~GGSY~GaL 158 (338)
++.++++.|+|.||||
T Consensus 282 p~~kliVTGHSLGGAL 297 (479)
T PLN00413 282 PTSKFILSGHSLGGAL 297 (479)
T ss_pred CCCeEEEEecCHHHHH
Confidence 4679999999999999
No 150
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=27.95 E-value=1.1e+02 Score=33.43 Aligned_cols=64 Identities=16% Similarity=0.088 Sum_probs=43.8
Q ss_pred HhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcC--------------CCCCCEEE
Q 044064 85 DIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLS--------------SDSSPFVV 149 (338)
Q Consensus 85 ~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~--------------~~~~pwI~ 149 (338)
++--+.|=.+|....| -|.|--.-.. + ..+-..|...-|+++..+.. -.+.+|.+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~~---------~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm 342 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPTT---------G-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAM 342 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCcc---------C-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEE
Confidence 4433449999999999 8888754211 1 24456788778888774311 12569999
Q ss_pred Ecccchhhc
Q 044064 150 FGGSYGGRL 158 (338)
Q Consensus 150 ~GGSY~GaL 158 (338)
+|.||+|.+
T Consensus 343 ~G~SY~G~~ 351 (767)
T PRK05371 343 TGKSYLGTL 351 (767)
T ss_pred EEEcHHHHH
Confidence 999999977
No 151
>PLN02162 triacylglycerol lipase
Probab=27.84 E-value=44 Score=34.30 Aligned_cols=16 Identities=31% Similarity=0.636 Sum_probs=14.6
Q ss_pred CCCCEEEEcccchhhc
Q 044064 143 DSSPFVVFGGSYGGRL 158 (338)
Q Consensus 143 ~~~pwI~~GGSY~GaL 158 (338)
++.++++.|+|.||||
T Consensus 276 p~~kliVTGHSLGGAL 291 (475)
T PLN02162 276 KNLKYILTGHSLGGAL 291 (475)
T ss_pred CCceEEEEecChHHHH
Confidence 4679999999999999
No 152
>PRK11071 esterase YqiA; Provisional
Probab=27.23 E-value=61 Score=28.54 Aligned_cols=39 Identities=15% Similarity=-0.027 Sum_probs=23.5
Q ss_pred cceEEEeCCCCCCCccccccccCCCCceEEEcCCCcccc
Q 044064 271 GSNIIFSNGMQDPWSRGGVLKNISASIIALVTKKGAHHV 309 (338)
Q Consensus 271 asnIiFtNG~~DPW~~~gv~~~~s~~~~~i~i~g~aHc~ 309 (338)
..+|..++|..|.=-.-......-.....++++||.|..
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~~~~~~~ggdH~f 174 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAACRQTVEEGGNHAF 174 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhcceEEECCCCcch
Confidence 367889999998543222111111233456889999986
No 153
>PLN02934 triacylglycerol lipase
Probab=26.98 E-value=33 Score=35.55 Aligned_cols=16 Identities=50% Similarity=0.781 Sum_probs=14.8
Q ss_pred CCCCEEEEcccchhhc
Q 044064 143 DSSPFVVFGGSYGGRL 158 (338)
Q Consensus 143 ~~~pwI~~GGSY~GaL 158 (338)
++.++++.|+|-||||
T Consensus 319 p~~kIvVTGHSLGGAL 334 (515)
T PLN02934 319 KNAKFVVTGHSLGGAL 334 (515)
T ss_pred CCCeEEEeccccHHHH
Confidence 4689999999999999
No 154
>PRK10162 acetyl esterase; Provisional
Probab=26.93 E-value=1.4e+02 Score=28.58 Aligned_cols=63 Identities=11% Similarity=-0.021 Sum_probs=40.4
Q ss_pred ceEEEeCCCCCCCccccccc-----cCCCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhh
Q 044064 272 SNIIFSNGMQDPWSRGGVLK-----NISASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWV 337 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~-----~~s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl 337 (338)
..++++.|+.||.+.-+..= .....+...+.+|..|....... ..++-+++-+++.+.+++.+
T Consensus 249 Pp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~---~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 249 PPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSR---MMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred CCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccC---chHHHHHHHHHHHHHHHHHh
Confidence 57899999999997654321 11234566789999998765432 23455555556666665544
No 155
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=26.71 E-value=48 Score=28.96 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=24.2
Q ss_pred hHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 128 DDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 128 D~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
|+..++..+.+.+...+.++|++|+|.|..+
T Consensus 38 ~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~ 68 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAIDEPTILVAHSLGCLT 68 (171)
T ss_dssp -HHHHHHHHHHCCHC-TTTEEEEEETHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCeEEEEeCHHHHH
Confidence 5778888888887766789999999998644
No 156
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=26.28 E-value=1.7e+02 Score=24.62 Aligned_cols=15 Identities=53% Similarity=0.902 Sum_probs=13.5
Q ss_pred CCCEEEEcccchhhc
Q 044064 144 SSPFVVFGGSYGGRL 158 (338)
Q Consensus 144 ~~pwI~~GGSY~GaL 158 (338)
..|++++|.|+||.+
T Consensus 63 ~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 63 GRPFVLVGHSSGGLL 77 (212)
T ss_pred CCCeEEEEECHHHHH
Confidence 469999999999987
No 157
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=25.68 E-value=89 Score=32.31 Aligned_cols=61 Identities=28% Similarity=0.298 Sum_probs=41.5
Q ss_pred CCcEEEEEee--eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcC---CCCCCEEEEcccchhhc
Q 044064 91 NASLVFIEIL--WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLS---SDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR--YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~---~~~~pwI~~GGSY~GaL 158 (338)
+|-+|+|+.= =|=|+--.+. +=.+.+-|=+|+..|-+.+-..+. ...+|++++|-||||.-
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~e-------~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~y 211 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGDE-------KKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHY 211 (498)
T ss_pred CCceEEEecCcccCcccccccc-------cccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchh
Confidence 5778888833 5555542222 113356677899999888876552 23369999999999976
No 158
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=25.61 E-value=86 Score=30.36 Aligned_cols=78 Identities=18% Similarity=0.172 Sum_probs=41.8
Q ss_pred hhhhcCCcEEEEEee-eccCccCccccCCccccCCCC--h---------hhhhhhHHHHHHHHhhhcCCCCCCEEEEccc
Q 044064 86 IAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLN--S---------QQALADDAVLIRSLKQNLSSDSSPFVVFGGS 153 (338)
Q Consensus 86 lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt--~---------~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGS 153 (338)
+| ..|..++.++-| .|...+-.....+...-.|++ + ...+.|...-++.++..-..+..++.+.|+|
T Consensus 105 ~a-~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~S 183 (320)
T PF05448_consen 105 WA-AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGS 183 (320)
T ss_dssp HH-HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEET
T ss_pred cc-cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeec
Confidence 44 458999999999 984333211000111112211 1 2355677777777664322234689999999
Q ss_pred chhhc--cccccc
Q 044064 154 YGGRL--MCKIID 164 (338)
Q Consensus 154 Y~GaL--~C~~i~ 164 (338)
-||+| +|..++
T Consensus 184 qGG~lal~~aaLd 196 (320)
T PF05448_consen 184 QGGGLALAAAALD 196 (320)
T ss_dssp HHHHHHHHHHHHS
T ss_pred CchHHHHHHHHhC
Confidence 99998 555554
No 159
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=24.42 E-value=1.1e+02 Score=31.50 Aligned_cols=74 Identities=19% Similarity=0.280 Sum_probs=50.5
Q ss_pred HHHhhhhcCCcEEEEEee---ecc-CccCccccCCccccCCCChhhhhhhHHHHHHHHhhh---cCCCCCCEEEEcccch
Q 044064 83 LLDIAPKFNASLVFIEIL---WGI-NAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQN---LSSDSSPFVVFGGSYG 155 (338)
Q Consensus 83 ~~~lA~~~~Alvv~lEHR---YG~-S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~---~~~~~~pwI~~GGSY~ 155 (338)
...||++-+..+|.+-|| +|= ..+ +.++=+.-.+.-.|-|...=+++++++ |+.+..-|-+||-|-|
T Consensus 117 gs~La~~g~vVvVSvNYRLG~lGfL~~~------~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAG 190 (491)
T COG2272 117 GSALAARGDVVVVSVNYRLGALGFLDLS------SLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAG 190 (491)
T ss_pred hHHHHhcCCEEEEEeCcccccceeeehh------hccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccch
Confidence 468899988999999999 661 111 111112222235688888888999876 4555567999999999
Q ss_pred hhccccc
Q 044064 156 GRLMCKI 162 (338)
Q Consensus 156 GaL~C~~ 162 (338)
++-.|..
T Consensus 191 a~si~~L 197 (491)
T COG2272 191 AASILTL 197 (491)
T ss_pred HHHHHHh
Confidence 9874443
No 160
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=23.82 E-value=54 Score=35.71 Aligned_cols=78 Identities=17% Similarity=0.232 Sum_probs=53.7
Q ss_pred cchHHHhhhhcCCcEEEEEee----eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccch
Q 044064 80 TGFLLDIAPKFNASLVFIEIL----WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYG 155 (338)
Q Consensus 80 ~g~~~~lA~~~~Alvv~lEHR----YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~ 155 (338)
.++...++...|.+++.+.-| ||..... .. ..+|.. .=..|...-++.+.+..-.+..++.++|+|||
T Consensus 547 ~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~-~~---~~~lG~----~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyG 618 (755)
T KOG2100|consen 547 VDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRS-AL---PRNLGD----VEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYG 618 (755)
T ss_pred ecHHHHhhccCCeEEEEEcCCCcCCcchhHHH-Hh---hhhcCC----cchHHHHHHHHHHHhcccccHHHeEEeccChH
Confidence 346667899999999999999 3433332 11 233322 23467667777776665456679999999999
Q ss_pred hhcccccccC
Q 044064 156 GRLMCKIIDG 165 (338)
Q Consensus 156 GaL~C~~i~~ 165 (338)
|-+.|..+..
T Consensus 619 Gy~t~~~l~~ 628 (755)
T KOG2100|consen 619 GYLTLKLLES 628 (755)
T ss_pred HHHHHHHhhh
Confidence 9998877764
No 161
>PF02784 Orn_Arg_deC_N: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; InterPro: IPR022644 These enzymes are collectively known as group IV decarboxylases []. Pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates can be classified into two different families on the basis of sequence similarities [, ]. Members of this family while most probably evolutionary related, do not share extensive regions of sequence similarities. The proteins contain a conserved lysine residue which is known, in mouse ODC [], to be the site of attachment of the pyridoxal-phosphate group. The proteins also contain a stretch of three consecutive glycine residues and has been proposed to be part of a substrate- binding region [].; GO: 0003824 catalytic activity; PDB: 2OO0_A 2ON3_A 1D7K_B 3VAB_A 2J66_A 3C5Q_A 2QGH_A 1TWI_B 1TUF_A 3N2O_A ....
Probab=23.55 E-value=1.1e+02 Score=28.11 Aligned_cols=63 Identities=25% Similarity=0.309 Sum_probs=41.4
Q ss_pred HHhhhhcCCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 84 LDIAPKFNASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 84 ~~lA~~~~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
.+.+++.+ +-+.==|= -| |.-. +.+. -.++++++..++..+++.++.++.+||=+||.+|..-
T Consensus 147 l~~~~~~~-l~l~GlH~H~g-S~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~g~~~l~~idiGGG~~~~y 210 (251)
T PF02784_consen 147 LERAKELG-LRLVGLHFHVG-SQIL-----DAEA-----FRQAIERLLDLAEELKEELGFEDLEFIDIGGGFGVPY 210 (251)
T ss_dssp HHHHHHTT-EEEEEEEE-HC-SSBS-----SCHH-----HHHHHHHHHHHHHHHHHHTTTTT-SEEEEESSB-SSS
T ss_pred HHhhccce-EEEEEeeeeec-cCCc-----chHH-----HHHHHHHHHHHHhhhccccccccccEEEeeCCCCCCC
Confidence 34566666 43433355 44 4432 2222 3689999999999999888776789999999988743
No 162
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=23.23 E-value=71 Score=34.15 Aligned_cols=69 Identities=23% Similarity=0.227 Sum_probs=46.3
Q ss_pred CCcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhh-cCCCCCCEEEEcccchhhccccccc
Q 044064 91 NASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQN-LSSDSSPFVVFGGSYGGRLMCKIID 164 (338)
Q Consensus 91 ~Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~-~~~~~~pwI~~GGSY~GaL~C~~i~ 164 (338)
.+.|+++=|= =|+-+=. . --++=|.|+=.+...|+..-++++.++ +. .....++.|||-||+|+=..+.
T Consensus 476 RGfiyAIAHVRGGgelG~-~---WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~-~~~~i~a~GGSAGGmLmGav~N 546 (682)
T COG1770 476 RGFVYAIAHVRGGGELGR-A---WYEDGKLLNKKNTFTDFIAAARHLVKEGYT-SPDRIVAIGGSAGGMLMGAVAN 546 (682)
T ss_pred CceEEEEEEeecccccCh-H---HHHhhhhhhccccHHHHHHHHHHHHHcCcC-CccceEEeccCchhHHHHHHHh
Confidence 4666777775 4443321 1 123347788888999988888887654 33 3457999999999999654443
No 163
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=23.19 E-value=65 Score=32.45 Aligned_cols=67 Identities=21% Similarity=0.323 Sum_probs=45.2
Q ss_pred HHhhhhcCCcEEEEEee---eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhh---cCCCCCCEEEEcccchhh
Q 044064 84 LDIAPKFNASLVFIEIL---WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQN---LSSDSSPFVVFGGSYGGR 157 (338)
Q Consensus 84 ~~lA~~~~Alvv~lEHR---YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~---~~~~~~pwI~~GGSY~Ga 157 (338)
..++.+.+..+|.+-.| ||= ...++. ..+ +...+|-|...=+++++++ |+.+...|.++|.|-||+
T Consensus 149 ~~~~~~~~vivVt~nYRlg~~Gf-l~~~~~--~~~-----~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~ 220 (535)
T PF00135_consen 149 ASLAASKDVIVVTINYRLGAFGF-LSLGDL--DAP-----SGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAA 220 (535)
T ss_dssp HHHHHHHTSEEEEE----HHHHH--BSSST--TSH-----BSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHH
T ss_pred cccccCCCEEEEEeccccccccc-cccccc--ccC-----chhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeeccccc
Confidence 46777889999999999 772 112222 111 4566888888888888876 455556899999998887
Q ss_pred c
Q 044064 158 L 158 (338)
Q Consensus 158 L 158 (338)
.
T Consensus 221 s 221 (535)
T PF00135_consen 221 S 221 (535)
T ss_dssp H
T ss_pred c
Confidence 7
No 164
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=23.08 E-value=1.5e+02 Score=33.66 Aligned_cols=60 Identities=13% Similarity=0.075 Sum_probs=37.0
Q ss_pred HHHhhhhcC--CcEEEEEee-eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 83 LLDIAPKFN--ASLVFIEIL-WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 83 ~~~lA~~~~--Alvv~lEHR-YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+..+++.+. ..++.++-+ .|.+.+. --+.++..+|++..++.+. ...|++++|.|+||.+
T Consensus 1084 ~~~l~~~l~~~~~v~~~~~~g~~~~~~~-----------~~~l~~la~~~~~~i~~~~-----~~~p~~l~G~S~Gg~v 1146 (1296)
T PRK10252 1084 FSVLSRYLDPQWSIYGIQSPRPDGPMQT-----------ATSLDEVCEAHLATLLEQQ-----PHGPYHLLGYSLGGTL 1146 (1296)
T ss_pred HHHHHHhcCCCCcEEEEECCCCCCCCCC-----------CCCHHHHHHHHHHHHHhhC-----CCCCEEEEEechhhHH
Confidence 455666553 345555555 5533221 1256777777777666432 2469999999999977
No 165
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=22.87 E-value=85 Score=32.22 Aligned_cols=65 Identities=23% Similarity=0.274 Sum_probs=41.4
Q ss_pred HhhhhcCCcEEEEEee---eccCccCccccCCccccCCCChhhhhhhHHHHHHHHhh---hcCCCCCCEEEEcccchhhc
Q 044064 85 DIAPKFNASLVFIEIL---WGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQ---NLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 85 ~lA~~~~Alvv~lEHR---YG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~---~~~~~~~pwI~~GGSY~GaL 158 (338)
.++..-+.++|.+..| +| =..+++.. ...|+... |...=.+++++ .++....++-++|.|.||+.
T Consensus 138 ~~~~~~~VVvVt~~YRLG~lG-F~st~d~~-~~gN~gl~-------Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~ 208 (545)
T KOG1516|consen 138 YVLLLKDVVVVTINYRLGPLG-FLSTGDSA-APGNLGLF-------DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAAS 208 (545)
T ss_pred hccccCCEEEEEecccceece-eeecCCCC-CCCcccHH-------HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHH
Confidence 4455567889999999 66 11112221 23566555 44444455554 45666679999999999988
No 166
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=22.37 E-value=79 Score=28.51 Aligned_cols=37 Identities=19% Similarity=0.105 Sum_probs=23.2
Q ss_pred hhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 122 SQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 122 ~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+++.-..++..|....+.......|++.+|+|.||-+
T Consensus 55 I~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli 91 (217)
T PF05057_consen 55 IDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLI 91 (217)
T ss_pred hHHHHHHHHHHHHHhccccccccccceEEEecccHHH
Confidence 4444444554544444444433469999999999966
No 167
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.30 E-value=1.1e+02 Score=28.20 Aligned_cols=74 Identities=23% Similarity=0.171 Sum_probs=45.3
Q ss_pred HHhhhhcCCcEEEEE--eeeccCccCccccCCccc-c-CCCChhhhhhhHHHHHHHHhhhcCCCCCCEEEEcccchhhc
Q 044064 84 LDIAPKFNASLVFIE--ILWGINAIWEDSYKSAET-L-GYLNSQQALADDAVLIRSLKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 84 ~~lA~~~~Alvv~lE--HRYG~S~P~~~~~~s~~n-L-~yLt~~QALaD~a~Fi~~~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
..||++ |-.+++.+ +|-|.+.+..+.-.-.++ + .-.+..+.++|+...+.+++++-.....++.++|=|+||-+
T Consensus 48 ~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~ 125 (236)
T COG0412 48 RRLAKA-GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGL 125 (236)
T ss_pred HHHHhC-CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHH
Confidence 344444 65555554 334555554321000111 1 12334899999999999999764344568999999999965
No 168
>PRK10749 lysophospholipase L2; Provisional
Probab=21.86 E-value=56 Score=31.19 Aligned_cols=58 Identities=12% Similarity=0.204 Sum_probs=37.4
Q ss_pred ceEEEeCCCCCCCccccccccC----------CCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNI----------SASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~----------s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
--++++.|+.|+.-........ ..+...+++||++|+.=+ + .+. .|+++++.|.+||+
T Consensus 260 ~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~----E-~~~----~r~~v~~~i~~fl~ 327 (330)
T PRK10749 260 TPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILF----E-KDA----MRSVALNAIVDFFN 327 (330)
T ss_pred CCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhh----C-CcH----HHHHHHHHHHHHHh
Confidence 4699999999999775442211 123356889999996321 1 111 46777777888873
No 169
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=21.30 E-value=1.1e+02 Score=29.75 Aligned_cols=63 Identities=22% Similarity=0.325 Sum_probs=37.3
Q ss_pred hHHHhhhhcCC---cEEEEEeeeccCccCccccCCccccCCCChhhhhhhHHHHHHHHhhhcCC--CCCCEEEEcccch
Q 044064 82 FLLDIAPKFNA---SLVFIEILWGINAIWEDSYKSAETLGYLNSQQALADDAVLIRSLKQNLSS--DSSPFVVFGGSYG 155 (338)
Q Consensus 82 ~~~~lA~~~~A---lvv~lEHRYG~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~~k~~~~~--~~~pwI~~GGSY~ 155 (338)
++..||+.+.. .+|.+.-| - |-.-+.+=+.+|=.+|++..|++++..-.. ...++|++|+|=|
T Consensus 51 Y~~~La~aL~~~~wsl~q~~Ls--S---------Sy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTG 118 (303)
T PF08538_consen 51 YLPDLAEALEETGWSLFQVQLS--S---------SYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTG 118 (303)
T ss_dssp CHHHHHHHHT-TT-EEEEE--G--G---------GBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCH
T ss_pred hHHHHHHHhccCCeEEEEEEec--C---------ccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCC
Confidence 46677777632 34444443 0 122345556788899999999999987532 4579999999976
No 170
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=20.78 E-value=81 Score=31.38 Aligned_cols=80 Identities=9% Similarity=0.005 Sum_probs=44.2
Q ss_pred CCChHHHHHHHHhhcCCCCchhh------HHhhhc----CCchhhHhhhccceEEEeCCCCCCCcccccccc----CC--
Q 044064 231 GYDYKDFAEQCMMTYGVRPRIHW------ITTEFG----GKRIELVLKRFGSNIIFSNGMQDPWSRGGVLKN----IS-- 294 (338)
Q Consensus 231 ~~~~~~~~~~C~~~FGv~p~~~~------~n~~yG----G~~~~~~l~~~asnIiFtNG~~DPW~~~gv~~~----~s-- 294 (338)
.++.+.|.+.|-+.|....++.. ....|. ..++...|++..-.++.+.|+.|+......... ..
T Consensus 273 ~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~ 352 (389)
T PRK06765 273 LTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQ 352 (389)
T ss_pred hhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc
Confidence 45677888888766643322110 111121 013444555555679999999998766433221 11
Q ss_pred -CCceEEEcCC-Cccccc
Q 044064 295 -ASIIALVTKK-GAHHVD 310 (338)
Q Consensus 295 -~~~~~i~i~g-~aHc~D 310 (338)
+....++|++ ++|..=
T Consensus 353 ~~~a~l~~I~s~~GH~~~ 370 (389)
T PRK06765 353 GKYAEVYEIESINGHMAG 370 (389)
T ss_pred CCCeEEEEECCCCCcchh
Confidence 2345567886 777643
No 171
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=20.14 E-value=1.3e+02 Score=27.96 Aligned_cols=91 Identities=13% Similarity=0.163 Sum_probs=52.0
Q ss_pred EeecCCCCCCCCCCccccccccchHHHhhhhcCCcEEE-EEee-ec-cCccCccccCCccccCCCChhhhhhhHHHHHHH
Q 044064 59 PQVLDHFTFQPKSDIECFAANTGFLLDIAPKFNASLVF-IEIL-WG-INAIWEDSYKSAETLGYLNSQQALADDAVLIRS 135 (338)
Q Consensus 59 ~Q~lDHF~~~~~gpi~~~~~~~g~~~~lA~~~~Alvv~-lEHR-YG-~S~P~~~~~~s~~nL~yLt~~QALaD~a~Fi~~ 135 (338)
.|+||=|.+.+..++..+. ..|++.+.-++.--.+|- +-.| |- .|+-+ ++ ++ +--|.+|-+.|..++.++
T Consensus 55 ~q~VDIwg~~~~~klfIfI-HGGYW~~g~rk~clsiv~~a~~~gY~vasvgY-~l--~~---q~htL~qt~~~~~~gv~f 127 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFI-HGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY-NL--CP---QVHTLEQTMTQFTHGVNF 127 (270)
T ss_pred ceEEEEecCCCCccEEEEE-ecchhhcCchhcccchhhhhhhcCeEEEEecc-Cc--Cc---ccccHHHHHHHHHHHHHH
Confidence 6999999987766654332 445443332221111111 1122 33 23333 11 22 334689999999999988
Q ss_pred HhhhcCCCCCCEEEEcccchhhc
Q 044064 136 LKQNLSSDSSPFVVFGGSYGGRL 158 (338)
Q Consensus 136 ~k~~~~~~~~pwI~~GGSY~GaL 158 (338)
+-+.+ ++.++|+|||==+||=
T Consensus 128 ilk~~--~n~k~l~~gGHSaGAH 148 (270)
T KOG4627|consen 128 ILKYT--ENTKVLTFGGHSAGAH 148 (270)
T ss_pred HHHhc--ccceeEEEcccchHHH
Confidence 76655 3578899888666654
No 172
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=20.13 E-value=90 Score=30.57 Aligned_cols=62 Identities=16% Similarity=0.136 Sum_probs=35.6
Q ss_pred CCcEEEEEee-e-ccC-ccCccccCCcccc----CCCChhhhhhhHHHHHHHHhhhcCCCCCC-EEEEcccchhhc
Q 044064 91 NASLVFIEIL-W-GIN-AIWEDSYKSAETL----GYLNSQQALADDAVLIRSLKQNLSSDSSP-FVVFGGSYGGRL 158 (338)
Q Consensus 91 ~Alvv~lEHR-Y-G~S-~P~~~~~~s~~nL----~yLt~~QALaD~a~Fi~~~k~~~~~~~~p-wI~~GGSY~GaL 158 (338)
+--||.+..| . |.| .|-+..-.+.+.+ .-.|.+.-.+|+..|++.+. . .+ .+++|.|+||++
T Consensus 91 ~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~----~--~~~~~lvG~S~Gg~i 160 (379)
T PRK00175 91 RYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALG----I--TRLAAVVGGSMGGMQ 160 (379)
T ss_pred ceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhC----C--CCceEEEEECHHHHH
Confidence 3468888877 3 555 3321100000111 12466666677777776543 2 34 589999999988
No 173
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=20.05 E-value=85 Score=27.17 Aligned_cols=14 Identities=21% Similarity=0.280 Sum_probs=11.1
Q ss_pred CCEEEEcccchhhc
Q 044064 145 SPFVVFGGSYGGRL 158 (338)
Q Consensus 145 ~pwI~~GGSY~GaL 158 (338)
.-.+++||+||=+=
T Consensus 96 ~i~FvIGGa~G~~~ 109 (153)
T TIGR00246 96 DVTLLIGGPEGLSP 109 (153)
T ss_pred eEEEEEcCCCcCCH
Confidence 47899999998643
No 174
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=20.02 E-value=1.5e+02 Score=28.46 Aligned_cols=56 Identities=11% Similarity=0.102 Sum_probs=36.3
Q ss_pred ceEEEeCCCCCCCccccccccC-----CCCceEEEcCCCcccccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q 044064 272 SNIIFSNGMQDPWSRGGVLKNI-----SASIIALVTKKGAHHVDFRSKTKDDPDWLVELRRQEVEIIQKWVG 338 (338)
Q Consensus 272 snIiFtNG~~DPW~~~gv~~~~-----s~~~~~i~i~g~aHc~Dl~~~~~~Dp~~l~~aR~~~~~~i~~Wl~ 338 (338)
--+++..|+.|+.......... ++.....+++|+.|.. ..+.+ |+++++.|.+||+
T Consensus 271 ~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i----~~E~~-------~~~v~~~i~~wL~ 331 (332)
T TIGR01607 271 IPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVI----TIEPG-------NEEVLKKIIEWIS 331 (332)
T ss_pred CCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCC----ccCCC-------HHHHHHHHHHHhh
Confidence 3589999999998765433321 2345567889988842 12221 4667778888874
Done!