BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044065
(81 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2V2S1|DEF20_ARATH Putative defensin-like protein 20 OS=Arabidopsis thaliana
GN=At5g52605 PE=3 SV=1
Length = 90
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 5 QTKVFSFIILAVLLLTIINCNEVSA-------SKCCRNHPQLGNCVKG-KDDQPNTGKCW 56
+T V SF++ A ++L I+ + A S CC+ HP +G C+ G DD GKCW
Sbjct: 3 RTNVVSFVLFAAIVLCILYGQKHIAPWIFEDKSICCKEHPSVGRCLPGIDDDAEKDGKCW 62
Query: 57 KYCTTECK-GCICKPVKSEHHCHCMC 81
K+C C+ G CK + +H CHC C
Sbjct: 63 KFCIEGCETGGFCKLFEHKHICHCNC 88
>sp|Q2V391|DEF22_ARATH Defensin-like protein 22 OS=Arabidopsis thaliana GN=At5g08315
PE=2 SV=1
Length = 82
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 7 KVFSFIILAVLLLTIINCN----EVSASKCCRNHPQLGNCVKGKDDQPNTGKCWKYCTTE 62
KVFSF +L +L ++I+ E S CC NHP+ G C DDQ +C +C
Sbjct: 5 KVFSFALLLILTFSLIDVEGYNVENGGSLCCNNHPKFGKCNTKNDDQ----RCNSWCLNG 60
Query: 63 C---KGCICKPVKSEHHCHCMC 81
C KG CK + CHC C
Sbjct: 61 CDNGKGGYCKSMSHGGQCHCYC 82
>sp|P0CAX9|DEF21_ARATH Defensin-like protein 21 OS=Arabidopsis thaliana GN=At4g14276
PE=2 SV=1
Length = 94
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 5 QTKVFSFIILAVLLLTI----INCNEVSA-------SKCCRNHPQLGNCVKGKDDQPN-T 52
+T V SF++ A ++L I I+ + +A S CC+ HP +G C+ DD
Sbjct: 3 RTNVVSFVLFAAIVLCIGSIQIDGQKHTAPWIPEDNSICCKEHPSVGRCLPNIDDSAEKG 62
Query: 53 GKCWKYCTTECK-GCICKPVKSEHHCHCMC 81
GKCWK+C C+ G CK +H CHC C
Sbjct: 63 GKCWKFCIEGCETGGFCKLFGHKHICHCNC 92
>sp|Q2V392|DEF25_ARATH Putative defensin-like protein 25 OS=Arabidopsis thaliana
GN=At5g08055 PE=3 SV=1
Length = 81
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
Query: 4 SQTKVFSFIILAVLLLTI----INCNEVSASKCCRNHPQLGNCVKGKDDQPNTGKCWKYC 59
+ KVFSF ++ VL ++ N E S CC NHP+ G C D+Q +C ++C
Sbjct: 2 ASLKVFSFALILVLTFSVDVEGYNV-ESGGSLCCNNHPKFGKCNTNNDNQ----RCNRWC 56
Query: 60 TTEC---KGCICKPVKSEHHCHCMC 81
C KG CK + CHC C
Sbjct: 57 HNGCGNGKGDYCKAMSHGGLCHCYC 81
>sp|Q2V4J2|DEF26_ARATH Putative defensin-like protein 26 OS=Arabidopsis thaliana
GN=At1g33607 PE=5 SV=1
Length = 81
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 4 SQTKVFSFIILAVLLLTIINC---NEVSASKCCRNHPQLGNCVKGKDDQPNTGKCWKYCT 60
+ KVFSF +L VL ++I E S CC +HP+ G C D+Q +C ++C
Sbjct: 2 ASLKVFSFALLIVLTFSVIGMIYNVESGGSLCCNSHPKFGKCNTNNDEQ----RCNRWCH 57
Query: 61 TEC---KGCICKPVKSEHHCHCMC 81
C KG K + CH C
Sbjct: 58 NGCGNGKGGYYKSMSHGGQCHYYC 81
>sp|Q2V364|DEF23_ARATH Putative defensin-like protein 23 OS=Arabidopsis thaliana
GN=At5g19315 PE=3 SV=1
Length = 80
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 4 SQTKVFSFIILAVLLLTIINCNEVSASKCCRNHPQLGNCVKGKDDQPNTGKCWKYCTTEC 63
+ K+ SF +L VLL +I +S CC H + G C +D + +C K+C C
Sbjct: 3 TTMKIMSFAMLLVLLFSIDVVEGSGSSLCCNTHAKFGACNTYQDRK----RCNKWCLDGC 58
Query: 64 ---KGCICKPVK-SEHHCHCMC 81
KG CK CHC C
Sbjct: 59 DNKKGGFCKRFAGGAKKCHCYC 80
>sp|P0CAY0|DEF28_ARATH Putative defensin-like protein 28 OS=Arabidopsis thaliana
GN=At4g14272 PE=5 SV=1
Length = 80
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 32 CCRNHPQLGNCVKGKDDQ-PNTGKCWKYCTTECK 64
C R H ++G C+ G DD N GKCWK+C K
Sbjct: 39 CNREHSEIGICLSGIDDDIQNDGKCWKFCLMVAK 72
>sp|Q2L6T3|DEF27_ARATH Putative defensin-like protein 27 OS=Arabidopsis thaliana
GN=At4g18823 PE=3 SV=1
Length = 74
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 17/86 (19%)
Query: 1 MAQSQTKVFSFIILAVLLLTIINCNEVSASK----CCRNHPQLGNCVKGKDDQPNTGKCW 56
M + F+F+ L+VLL + + +S++K CC +HP+ G C C
Sbjct: 1 MVHPRFVFFAFLALSVLLAVMNEDSILSSNKGDSLCCNDHPEFGICT--------NKSCN 52
Query: 57 KYCTTEC-KGCICKPVKSEHHCHCMC 81
K+C C +G CK CHC C
Sbjct: 53 KWCLQGCTRGGFCK----RKICHCYC 74
>sp|P82727|DF165_ARATH Putative defensin-like protein 165 OS=Arabidopsis thaliana
GN=LCR12 PE=3 SV=1
Length = 84
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 6 TKVFSFIILAVLLLTIIN-CNEVSASKCCRNHPQLG-NCVKGKDDQPNTGKCWKYCTTEC 63
TK+FS+ +L V+L +++ + A K CR + G CV KC + C +
Sbjct: 3 TKLFSYFMLLVVLFSVLTIIPKTEAQKRCRQELEPGKQCV--------LAKCRELCFKQL 54
Query: 64 KG---CICKPV-KSEHHCHCM 80
KG CI KP S++ C+C
Sbjct: 55 KGFGSCIEKPPGSSKYTCNCF 75
>sp|Q2V371|DEF24_ARATH Defensin-like protein 24 OS=Arabidopsis thaliana GN=At5g16453
PE=3 SV=1
Length = 88
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 31 KCCRNHPQLGNCVKGKDDQPNTGKCWKYCTTECKGCICKPVKSEHHCHCMC 81
KCC N P+ G C +DD+ C C T KG C+P+ C C
Sbjct: 36 KCCSNQPEFGICDSKEDDERCAQMCLDGCPTN-KGGGCQPITEAPGAVCSC 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.136 0.485
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,758,051
Number of Sequences: 539616
Number of extensions: 948942
Number of successful extensions: 2946
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2917
Number of HSP's gapped (non-prelim): 33
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)